Query 003847
Match_columns 791
No_of_seqs 940 out of 5652
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 06:04:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003847.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003847hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aoj_A High affinity nerve gro 100.0 1.1E-53 3.9E-58 456.9 21.5 263 480-788 46-325 (329)
2 4asz_A BDNF/NT-3 growth factor 100.0 5.5E-54 1.9E-58 453.0 16.6 261 480-787 18-294 (299)
3 4fih_A Serine/threonine-protei 100.0 7.3E-53 2.5E-57 449.8 20.6 244 480-775 79-323 (346)
4 3omv_A RAF proto-oncogene seri 100.0 1.7E-52 6E-57 441.5 21.4 256 479-784 40-302 (307)
5 4gt4_A Tyrosine-protein kinase 100.0 2.6E-52 8.7E-57 442.2 21.2 256 480-781 31-305 (308)
6 4aw0_A HPDK1, 3-phosphoinositi 100.0 1.1E-52 3.8E-57 441.8 16.8 243 479-773 36-282 (311)
7 4g3f_A NF-kappa-beta-inducing 100.0 2.5E-52 8.5E-57 444.5 19.2 261 479-790 62-328 (336)
8 4b9d_A Serine/threonine-protei 100.0 1.8E-52 6.2E-57 447.5 16.3 244 480-775 29-276 (350)
9 4fie_A Serine/threonine-protei 100.0 1.1E-51 3.7E-56 451.5 20.7 245 479-775 155-400 (423)
10 3hyh_A Carbon catabolite-derep 100.0 2.4E-51 8.1E-56 425.9 20.8 240 480-775 18-262 (275)
11 3fpq_A Serine/threonine-protei 100.0 1.2E-50 4E-55 424.5 22.8 240 480-775 31-282 (290)
12 3ubd_A Ribosomal protein S6 ki 100.0 3.4E-51 1.2E-55 430.6 15.0 243 479-775 28-281 (304)
13 3hmm_A TGF-beta receptor type- 100.0 1.9E-50 6.4E-55 428.9 15.9 264 480-783 8-298 (303)
14 4g31_A Eukaryotic translation 100.0 3.9E-49 1.3E-53 416.7 22.0 261 479-780 9-286 (299)
15 4ase_A Vascular endothelial gr 100.0 9.4E-50 3.2E-54 430.0 17.5 258 479-781 68-346 (353)
16 4b99_A Mitogen-activated prote 100.0 1.9E-46 6.5E-51 411.3 22.8 259 479-776 58-345 (398)
17 4f9c_A Cell division cycle 7-r 100.0 1.4E-45 4.8E-50 400.1 20.9 218 479-714 25-249 (361)
18 3v5w_A G-protein coupled recep 100.0 3E-45 1E-49 417.9 22.3 245 478-775 192-449 (689)
19 3uto_A Twitchin; kinase, muscl 100.0 1.8E-45 6.1E-50 423.3 19.0 247 479-775 161-410 (573)
20 3fxz_A Serine/threonine-protei 100.0 6.4E-43 2.2E-47 371.5 23.1 244 480-775 25-269 (297)
21 3fe3_A MAP/microtubule affinit 100.0 7.2E-43 2.5E-47 375.9 21.8 242 480-776 20-265 (328)
22 3s95_A LIMK-1, LIM domain kina 100.0 1.7E-42 5.7E-47 370.7 22.5 266 480-781 15-281 (310)
23 2qkw_B Protein kinase; three-h 100.0 4.4E-43 1.5E-47 377.1 18.1 269 479-784 43-317 (321)
24 3zgw_A Maternal embryonic leuc 100.0 9.3E-43 3.2E-47 377.3 19.8 244 480-776 15-261 (347)
25 3p86_A Serine/threonine-protei 100.0 1E-42 3.5E-47 371.9 18.9 256 478-783 40-299 (309)
26 2psq_A Fibroblast growth facto 100.0 4.7E-42 1.6E-46 376.2 23.5 257 479-781 85-363 (370)
27 1o6l_A RAC-beta serine/threoni 100.0 4.2E-42 1.5E-46 371.0 22.7 243 480-776 10-261 (337)
28 2c30_A Serine/threonine-protei 100.0 6.9E-42 2.3E-46 367.7 23.9 246 479-776 49-295 (321)
29 4hcu_A Tyrosine-protein kinase 100.0 1.3E-42 4.5E-47 363.5 17.6 255 477-783 12-267 (269)
30 3kul_A Ephrin type-A receptor 100.0 2.2E-42 7.7E-47 372.1 19.3 257 479-784 53-315 (325)
31 3soc_A Activin receptor type-2 100.0 1.9E-42 6.6E-47 372.3 18.3 262 478-781 27-317 (322)
32 2yab_A Death-associated protei 100.0 1.6E-41 5.5E-46 369.9 24.7 242 479-775 16-272 (361)
33 3sxs_A Cytoplasmic tyrosine-pr 100.0 6.1E-42 2.1E-46 358.2 20.6 254 478-783 11-265 (268)
34 3ugc_A Tyrosine-protein kinase 100.0 3.3E-42 1.1E-46 365.6 16.7 267 479-782 14-291 (295)
35 3txo_A PKC-L, NPKC-ETA, protei 100.0 4.6E-42 1.6E-46 373.1 18.0 242 480-775 28-280 (353)
36 2qol_A Ephrin receptor; recept 100.0 6.8E-42 2.3E-46 375.3 18.9 256 477-781 47-308 (373)
37 3uim_A Brassinosteroid insensi 100.0 7.1E-42 2.4E-46 368.5 18.8 266 479-782 34-311 (326)
38 4eqm_A Protein kinase; transfe 100.0 1.4E-41 4.8E-46 360.6 20.6 252 480-784 16-277 (294)
39 2x4f_A Myosin light chain kina 100.0 1.6E-41 5.4E-46 372.2 21.3 246 480-775 94-342 (373)
40 2bdw_A Hypothetical protein K1 100.0 2.3E-41 8E-46 369.4 22.4 248 478-776 32-285 (362)
41 3soa_A Calcium/calmodulin-depe 100.0 2.8E-41 9.7E-46 377.6 23.5 244 479-776 15-268 (444)
42 4dc2_A Protein kinase C IOTA t 100.0 2E-41 7E-46 372.4 21.6 252 479-775 56-318 (396)
43 2y0a_A Death-associated protei 100.0 2.5E-41 8.6E-46 364.1 21.9 243 479-776 15-272 (326)
44 3gen_A Tyrosine-protein kinase 100.0 1.1E-41 3.9E-46 359.2 18.6 253 478-782 27-280 (283)
45 1fot_A TPK1 delta, CAMP-depend 100.0 2.4E-41 8.1E-46 362.4 21.3 239 480-775 11-258 (318)
46 2nru_A Interleukin-1 receptor- 100.0 7.6E-41 2.6E-45 357.2 25.1 262 481-783 37-307 (307)
47 3c0i_A Peripheral plasma membr 100.0 1.9E-41 6.5E-46 368.9 20.6 247 478-775 27-286 (351)
48 3cbl_A C-FES, proto-oncogene t 100.0 5.9E-42 2E-46 376.7 16.4 254 478-781 117-373 (377)
49 1tki_A Titin; serine kinase, m 100.0 1.3E-41 4.6E-46 365.2 18.7 242 480-776 10-258 (321)
50 1xjd_A Protein kinase C, theta 100.0 1.4E-41 4.8E-46 368.0 17.7 241 480-774 22-268 (345)
51 3h4j_B AMPK kdaid, SNF1-like p 100.0 1.7E-41 5.7E-46 366.0 18.0 241 480-776 14-259 (336)
52 3tt0_A Basic fibroblast growth 100.0 6.7E-41 2.3E-45 369.0 23.2 259 477-781 71-351 (382)
53 4euu_A Serine/threonine-protei 100.0 1.2E-40 4.1E-45 357.8 24.5 259 480-782 14-309 (319)
54 1rdq_E PKA C-alpha, CAMP-depen 100.0 3.5E-41 1.2E-45 366.0 20.4 240 479-775 45-293 (350)
55 3a62_A Ribosomal protein S6 ki 100.0 6.5E-41 2.2E-45 361.0 22.3 243 479-775 21-276 (327)
56 3qd2_B Eukaryotic translation 100.0 1E-40 3.4E-45 360.1 23.6 257 479-776 10-326 (332)
57 1qcf_A Haematopoetic cell kina 100.0 3.1E-41 1.1E-45 380.1 20.4 255 478-784 191-446 (454)
58 3a8x_A Protein kinase C IOTA t 100.0 7.9E-41 2.7E-45 362.6 22.7 251 480-775 14-275 (345)
59 2i0e_A Protein kinase C-beta I 100.0 4.4E-41 1.5E-45 365.2 20.3 242 480-775 25-276 (353)
60 3q4u_A Activin receptor type-1 100.0 2E-41 6.7E-46 360.6 17.1 254 480-780 13-300 (301)
61 4fr4_A YANK1, serine/threonine 100.0 5.8E-41 2E-45 367.6 20.8 245 479-775 19-271 (384)
62 2izr_A Casein kinase I isoform 100.0 5E-41 1.7E-45 362.6 20.0 259 480-780 14-279 (330)
63 3dtc_A Mitogen-activated prote 100.0 3.6E-41 1.2E-45 352.9 18.3 246 479-780 11-271 (271)
64 1opk_A P150, C-ABL, proto-onco 100.0 4.1E-41 1.4E-45 382.9 20.1 255 478-783 223-479 (495)
65 3niz_A Rhodanese family protei 100.0 1.3E-40 4.5E-45 356.1 22.8 254 480-775 26-300 (311)
66 1luf_A Muscle-specific tyrosin 100.0 6.1E-41 2.1E-45 363.8 20.5 260 479-784 51-337 (343)
67 2ivs_A Proto-oncogene tyrosine 100.0 5E-41 1.7E-45 359.7 19.5 259 477-781 25-310 (314)
68 3lxl_A Tyrosine-protein kinase 100.0 4.5E-41 1.6E-45 362.4 19.1 267 479-784 27-305 (327)
69 3t9t_A Tyrosine-protein kinase 100.0 4.2E-41 1.4E-45 351.4 18.1 253 478-782 11-264 (267)
70 2ac3_A MAP kinase-interacting 100.0 1.1E-40 3.7E-45 357.6 21.7 263 480-776 18-296 (316)
71 1kob_A Twitchin; kinase, intra 100.0 5E-41 1.7E-45 369.3 19.5 248 479-776 55-305 (387)
72 3vhe_A Vascular endothelial gr 100.0 2.4E-41 8E-46 369.6 16.7 258 479-781 26-354 (359)
73 3l9p_A Anaplastic lymphoma kin 100.0 4.2E-41 1.4E-45 368.4 18.4 256 480-781 76-344 (367)
74 3poz_A Epidermal growth factor 100.0 2.2E-41 7.4E-46 364.9 15.7 253 479-782 19-278 (327)
75 3kn6_A Ribosomal protein S6 ki 100.0 3.6E-41 1.2E-45 362.7 17.3 247 480-776 16-271 (325)
76 1fmk_A C-SRC, P60-SRC, tyrosin 100.0 5.5E-41 1.9E-45 377.7 19.6 256 479-786 188-444 (452)
77 1t46_A HOMO sapiens V-KIT hard 100.0 8.2E-41 2.8E-45 357.8 20.0 260 477-781 25-306 (313)
78 1mp8_A Focal adhesion kinase 1 100.0 7.7E-41 2.6E-45 352.5 19.2 253 477-781 17-275 (281)
79 4f0f_A Serine/threonine-protei 100.0 1.7E-40 5.9E-45 350.9 21.5 247 480-780 24-287 (287)
80 3qup_A Tyrosine-protein kinase 100.0 7.1E-41 2.4E-45 360.2 18.8 259 478-782 26-298 (323)
81 3lb7_A RAF proto-oncogene seri 100.0 1.5E-40 5E-45 355.0 20.8 258 477-784 38-302 (307)
82 3tki_A Serine/threonine-protei 100.0 4.2E-41 1.4E-45 361.8 16.7 248 480-776 12-262 (323)
83 4e5w_A Tyrosine-protein kinase 100.0 5.9E-41 2E-45 357.1 17.6 265 479-780 25-300 (302)
84 1k9a_A Carboxyl-terminal SRC k 100.0 1.5E-40 5E-45 374.0 21.7 247 479-782 197-445 (450)
85 3v8s_A RHO-associated protein 100.0 3.2E-41 1.1E-45 372.9 16.0 248 479-776 73-330 (410)
86 4fvq_A Tyrosine-protein kinase 100.0 2.2E-41 7.6E-46 358.0 14.1 249 479-784 12-277 (289)
87 2r5t_A Serine/threonine-protei 100.0 6.1E-41 2.1E-45 366.7 17.7 241 480-774 43-288 (373)
88 3lxp_A Non-receptor tyrosine-p 100.0 1.1E-40 3.7E-45 358.0 18.9 263 478-781 34-309 (318)
89 1ob3_A PFPK5, cell division co 100.0 2.4E-40 8.1E-45 350.1 21.2 246 480-775 7-280 (288)
90 1csn_A Casein kinase-1; phosph 100.0 2.2E-40 7.4E-45 352.0 21.0 260 480-781 15-282 (298)
91 2w4o_A Calcium/calmodulin-depe 100.0 9.8E-41 3.4E-45 362.9 18.7 246 479-776 57-306 (349)
92 3kmu_A ILK, integrin-linked ki 100.0 1.4E-40 4.7E-45 348.1 19.2 248 479-782 14-270 (271)
93 2zv2_A Calcium/calmodulin-depe 100.0 1E-40 3.4E-45 354.8 18.3 243 480-775 18-292 (298)
94 1u59_A Tyrosine-protein kinase 100.0 1.6E-40 5.6E-45 351.1 19.8 252 480-781 15-271 (287)
95 3f3z_A Calcium/calmodulin-depe 100.0 4.1E-40 1.4E-44 346.1 22.7 241 479-775 13-261 (277)
96 4ejn_A RAC-alpha serine/threon 100.0 8E-41 2.7E-45 376.2 18.2 243 479-775 152-404 (446)
97 1rjb_A FL cytokine receptor; k 100.0 8.8E-41 3E-45 362.8 17.9 263 477-784 47-336 (344)
98 3gni_B Strad alpha; kinase fol 100.0 1.9E-40 6.6E-45 366.5 20.7 270 479-781 29-341 (389)
99 3pls_A Macrophage-stimulating 100.0 3.4E-40 1.2E-44 350.4 21.7 258 477-781 23-286 (298)
100 3ork_A Serine/threonine protei 100.0 4.2E-41 1.4E-45 360.0 14.8 250 480-780 17-279 (311)
101 3op5_A Serine/threonine-protei 100.0 1.7E-40 5.7E-45 363.5 19.8 262 480-780 40-327 (364)
102 3kfa_A Tyrosine-protein kinase 100.0 1E-40 3.5E-45 352.7 17.3 253 477-780 15-269 (288)
103 3uc3_A Serine/threonine-protei 100.0 1.8E-40 6.1E-45 362.4 19.6 245 480-776 25-275 (361)
104 2pvf_A Fibroblast growth facto 100.0 3.3E-40 1.1E-44 356.8 21.5 259 477-781 37-317 (334)
105 1nxk_A MAP kinase-activated pr 100.0 2.8E-40 9.4E-45 365.8 21.3 246 481-776 68-322 (400)
106 2y94_A 5'-AMP-activated protei 100.0 1.2E-40 4.1E-45 374.9 18.6 241 480-775 21-266 (476)
107 4aw2_A Serine/threonine-protei 100.0 1.1E-40 3.6E-45 371.6 17.9 250 479-776 78-339 (437)
108 3fdn_A Serine/threonine-protei 100.0 2.8E-40 9.7E-45 347.8 20.2 241 480-776 14-258 (279)
109 3dbq_A Dual specificity protei 100.0 1.8E-40 6.3E-45 360.1 19.2 247 479-776 13-274 (343)
110 2eue_A Carbon catabolite derep 100.0 2.1E-40 7.3E-45 347.9 19.0 240 480-775 18-262 (275)
111 3kex_A Receptor tyrosine-prote 100.0 5.2E-41 1.8E-45 361.6 14.5 253 480-783 18-277 (325)
112 3kk8_A Calcium/calmodulin depe 100.0 5.5E-40 1.9E-44 346.4 22.0 246 480-776 11-262 (284)
113 2a2a_A Death-associated protei 100.0 4.6E-40 1.6E-44 353.6 21.7 242 479-775 16-272 (321)
114 2v62_A Serine/threonine-protei 100.0 1.4E-40 4.7E-45 361.4 17.7 264 480-787 42-333 (345)
115 3p1a_A MYT1 kinase, membrane-a 100.0 5.5E-40 1.9E-44 351.3 22.1 240 479-775 61-304 (311)
116 3o0g_A Cell division protein k 100.0 4.2E-40 1.4E-44 348.9 20.6 247 480-775 7-282 (292)
117 1mqb_A Ephrin type-A receptor 100.0 3.4E-40 1.2E-44 356.5 20.1 254 479-781 48-308 (333)
118 1qpc_A LCK kinase; alpha beta 100.0 2.3E-40 7.8E-45 348.4 18.1 252 478-781 16-268 (279)
119 2eva_A TAK1 kinase - TAB1 chim 100.0 3.5E-40 1.2E-44 352.2 19.6 246 480-781 13-262 (307)
120 3mdy_A Bone morphogenetic prot 100.0 4.6E-40 1.6E-44 355.9 20.7 261 479-786 41-335 (337)
121 2a19_B Interferon-induced, dou 100.0 4.9E-40 1.7E-44 346.6 20.1 246 479-785 15-277 (284)
122 2pmi_A Negative RE, cyclin-dep 100.0 8.8E-40 3E-44 350.7 22.3 249 480-776 10-294 (317)
123 3cc6_A Protein tyrosine kinase 100.0 5.6E-40 1.9E-44 345.8 20.4 251 479-781 16-272 (281)
124 1u5q_A Serine/threonine protei 100.0 5.6E-40 1.9E-44 356.5 20.8 242 479-776 58-306 (348)
125 2h8h_A Proto-oncogene tyrosine 100.0 2.1E-40 7.3E-45 380.4 18.2 257 478-786 270-527 (535)
126 3lzb_A Epidermal growth factor 100.0 1.6E-40 5.4E-45 358.1 15.8 254 480-784 20-280 (327)
127 2vd5_A DMPK protein; serine/th 100.0 2.5E-40 8.6E-45 366.0 17.8 249 479-776 65-328 (412)
128 2zmd_A Dual specificity protei 100.0 6.8E-40 2.3E-44 361.6 21.3 247 479-776 60-321 (390)
129 3og7_A AKAP9-BRAF fusion prote 100.0 4.1E-40 1.4E-44 348.5 18.7 254 479-782 28-288 (289)
130 3hko_A Calcium/calmodulin-depe 100.0 3.7E-40 1.3E-44 358.0 18.8 257 479-776 30-331 (345)
131 1xbb_A Tyrosine-protein kinase 100.0 3.6E-40 1.2E-44 349.2 18.2 249 481-780 23-277 (291)
132 2h34_A Serine/threonine-protei 100.0 6.9E-40 2.4E-44 350.2 20.5 256 480-785 39-299 (309)
133 3gxj_A TGF-beta receptor type- 100.0 1E-41 3.5E-46 363.0 6.3 261 479-785 7-300 (303)
134 2rku_A Serine/threonine-protei 100.0 9.1E-40 3.1E-44 346.7 21.0 243 480-776 20-266 (294)
135 2owb_A Serine/threonine-protei 100.0 7.1E-40 2.4E-44 354.3 20.6 243 480-776 46-292 (335)
136 2wqm_A Serine/threonine-protei 100.0 4.3E-40 1.5E-44 351.9 18.6 260 479-786 36-301 (310)
137 3llt_A Serine/threonine kinase 100.0 1.7E-39 5.7E-44 355.1 23.6 191 480-714 40-261 (360)
138 2acx_A G protein-coupled recep 100.0 2.9E-40 1E-44 376.6 18.3 249 479-776 188-445 (576)
139 2jam_A Calcium/calmodulin-depe 100.0 6.6E-40 2.3E-44 349.5 19.8 245 479-775 13-261 (304)
140 3rgf_A Cyclin-dependent kinase 100.0 5.2E-40 1.8E-44 365.0 19.7 270 471-776 17-334 (405)
141 3c4z_A Rhodopsin kinase; Ser/T 100.0 6.3E-40 2.1E-44 373.2 20.6 250 480-775 190-448 (543)
142 3is5_A Calcium-dependent prote 100.0 7.5E-40 2.6E-44 345.7 19.7 247 479-775 26-278 (285)
143 3c1x_A Hepatocyte growth facto 100.0 1.4E-40 4.9E-45 364.4 14.7 255 479-781 93-354 (373)
144 2w1i_A JAK2; chromosomal rearr 100.0 2.2E-40 7.4E-45 357.0 15.6 267 478-781 44-321 (326)
145 2ozo_A Tyrosine-protein kinase 100.0 6.5E-40 2.2E-44 381.8 20.7 250 481-780 342-596 (613)
146 3cok_A Serine/threonine-protei 100.0 2.5E-40 8.4E-45 348.0 15.5 243 480-775 16-262 (278)
147 4fl3_A Tyrosine-protein kinase 100.0 4.8E-40 1.6E-44 383.8 19.4 249 481-780 375-629 (635)
148 3f66_A Hepatocyte growth facto 100.0 7.7E-40 2.6E-44 347.9 19.4 256 479-782 29-291 (298)
149 2buj_A Serine/threonine-protei 100.0 1.5E-39 5E-44 348.9 21.3 270 479-786 33-310 (317)
150 2i1m_A Macrophage colony-stimu 100.0 3.5E-40 1.2E-44 356.4 16.6 258 479-781 50-325 (333)
151 3dls_A PAS domain-containing s 100.0 2.3E-40 7.9E-45 357.8 15.0 237 479-776 28-275 (335)
152 3ttj_A Mitogen-activated prote 100.0 1.4E-39 4.7E-44 366.8 22.0 253 479-776 66-356 (464)
153 2vgo_A Serine/threonine-protei 100.0 1.2E-39 4E-44 344.0 20.0 241 479-775 18-262 (284)
154 1p4o_A Insulin-like growth fac 100.0 1E-39 3.4E-44 351.0 19.8 258 478-782 28-299 (322)
155 2qr7_A Ribosomal protein S6 ki 100.0 4.5E-40 1.5E-44 356.2 17.0 242 479-775 26-277 (342)
156 3brb_A Proto-oncogene tyrosine 100.0 1.5E-39 5.1E-44 348.3 20.8 260 476-781 35-307 (313)
157 4hgt_A Casein kinase I isoform 100.0 2E-39 6.8E-44 344.1 21.5 261 479-781 13-279 (296)
158 3bhy_A Death-associated protei 100.0 1.8E-39 6.2E-44 342.2 21.0 242 479-775 9-265 (283)
159 2clq_A Mitogen-activated prote 100.0 1.4E-39 4.8E-44 345.1 20.2 248 480-775 27-278 (295)
160 2y7j_A Phosphorylase B kinase 100.0 2.3E-39 8E-44 354.3 22.5 242 479-775 98-359 (365)
161 3mwu_A Calmodulin-domain prote 100.0 1.9E-39 6.6E-44 369.0 22.5 245 480-776 27-277 (486)
162 3uzp_A CKI-delta, CKID, casein 100.0 3.3E-39 1.1E-43 342.5 22.8 260 480-781 14-279 (296)
163 3lm5_A Serine/threonine-protei 100.0 7.9E-40 2.7E-44 352.7 17.9 248 480-776 34-288 (327)
164 4eut_A Serine/threonine-protei 100.0 7.8E-40 2.7E-44 362.2 18.0 259 480-782 14-309 (396)
165 3g33_A Cell division protein k 100.0 1.9E-39 6.5E-44 346.6 20.4 246 480-775 14-296 (308)
166 4agu_A Cyclin-dependent kinase 100.0 4.6E-39 1.6E-43 344.1 23.3 256 480-776 8-285 (311)
167 3e7e_A HBUB1, BUB1A, mitotic c 100.0 8E-40 2.7E-44 358.3 17.7 249 478-780 68-337 (365)
168 1t4h_A Serine/threonine-protei 100.0 4.1E-39 1.4E-43 340.9 22.5 240 480-775 31-282 (290)
169 1byg_A CSK, protein (C-termina 100.0 7.2E-40 2.4E-44 344.5 16.5 246 479-781 25-272 (278)
170 3oz6_A Mitogen-activated prote 100.0 2.4E-39 8.1E-44 357.6 21.2 275 480-776 14-329 (388)
171 3pfq_A PKC-B, PKC-beta, protei 100.0 1.7E-39 5.6E-44 381.9 20.8 243 479-775 345-597 (674)
172 1vzo_A Ribosomal protein S6 ki 100.0 5.8E-40 2E-44 357.8 15.7 250 479-777 58-323 (355)
173 2h6d_A 5'-AMP-activated protei 100.0 2.5E-39 8.7E-44 339.8 20.0 242 480-776 16-262 (276)
174 2xir_A Vascular endothelial gr 100.0 8.2E-40 2.8E-44 350.6 16.6 258 479-781 31-309 (316)
175 1fvr_A Tyrosine-protein kinase 100.0 7.2E-40 2.5E-44 353.1 16.2 260 479-787 29-305 (327)
176 3ll6_A Cyclin G-associated kin 100.0 6.5E-40 2.2E-44 354.5 15.9 263 477-781 30-307 (337)
177 2jii_A Serine/threonine-protei 100.0 9.9E-40 3.4E-44 355.7 17.4 256 480-781 47-335 (352)
178 3g2f_A Bone morphogenetic prot 100.0 3.7E-40 1.3E-44 356.6 13.6 264 480-781 18-317 (336)
179 3lij_A Calcium/calmodulin depe 100.0 3.1E-39 1.1E-43 368.0 21.8 245 479-775 41-291 (494)
180 3gbz_A Kinase, CMGC CDK; ssgci 100.0 1.5E-39 5E-44 350.9 18.1 245 480-775 39-318 (329)
181 3nyv_A Calmodulin-domain prote 100.0 1.2E-39 4.2E-44 370.7 18.0 245 479-775 30-281 (484)
182 1cm8_A Phosphorylated MAP kina 100.0 5.4E-39 1.8E-43 351.6 22.2 256 480-781 30-315 (367)
183 3byv_A Rhoptry kinase; malaria 100.0 2.1E-40 7.2E-45 364.5 10.7 238 480-775 78-359 (377)
184 3rp9_A Mitogen-activated prote 100.0 7.3E-39 2.5E-43 361.7 23.4 215 479-708 57-280 (458)
185 3i6u_A CDS1, serine/threonine- 100.0 1.1E-39 3.9E-44 363.3 16.6 242 479-775 139-399 (419)
186 3q5i_A Protein kinase; CDPK, m 100.0 4.7E-39 1.6E-43 367.5 21.9 241 480-776 41-302 (504)
187 3com_A Serine/threonine-protei 100.0 8.8E-39 3E-43 342.4 22.7 244 480-775 34-278 (314)
188 3a7i_A MST3 kinase, serine/thr 100.0 6.1E-39 2.1E-43 341.8 21.2 243 480-776 27-271 (303)
189 1b6c_B TGF-B superfamily recep 100.0 2.1E-39 7.1E-44 351.6 17.6 258 479-783 46-337 (342)
190 1wak_A Serine/threonine-protei 100.0 6.4E-39 2.2E-43 355.1 21.6 253 479-775 41-391 (397)
191 2yex_A Serine/threonine-protei 100.0 5.4E-39 1.9E-43 337.2 19.5 247 480-775 12-261 (276)
192 2yfx_A Tyrosine-protein kinase 100.0 3.8E-39 1.3E-43 347.4 18.6 257 479-781 34-303 (327)
193 1ua2_A CAK, cell division prot 100.0 4.4E-39 1.5E-43 349.7 19.2 248 479-776 14-292 (346)
194 3mi9_A Cell division protein k 100.0 1.1E-38 3.6E-43 347.5 22.1 254 480-776 22-312 (351)
195 3eqc_A Dual specificity mitoge 100.0 1.8E-39 6.2E-44 354.8 16.1 254 479-775 37-324 (360)
196 1x8b_A WEE1HU, WEE1-like prote 100.0 1E-38 3.4E-43 337.0 21.2 242 479-776 15-280 (289)
197 3mtl_A Cell division protein k 100.0 1.9E-39 6.5E-44 349.2 15.8 255 480-775 7-281 (324)
198 1phk_A Phosphorylase kinase; g 100.0 1E-38 3.5E-43 339.2 21.1 245 480-775 22-283 (298)
199 4aaa_A Cyclin-dependent kinase 100.0 4.8E-39 1.7E-43 347.2 18.7 255 480-775 30-306 (331)
200 2w5a_A Serine/threonine-protei 100.0 1.3E-39 4.4E-44 342.6 13.8 252 480-780 11-272 (279)
201 3kvw_A DYRK2, dual specificity 100.0 1.3E-38 4.5E-43 355.7 22.7 192 480-715 102-302 (429)
202 2j7t_A Serine/threonine-protei 100.0 3.4E-39 1.1E-43 343.5 17.1 246 480-775 24-275 (302)
203 3n9x_A Phosphotransferase; mal 100.0 1.4E-38 4.7E-43 356.2 22.2 214 480-713 31-253 (432)
204 2wtk_C Serine/threonine-protei 100.0 1.2E-38 4E-43 339.9 20.6 246 480-776 10-264 (305)
205 2xrw_A Mitogen-activated prote 100.0 1.8E-38 6.2E-43 348.2 22.7 252 480-776 30-319 (371)
206 1u46_A ACK-1, activated CDC42 100.0 2.5E-39 8.4E-44 342.6 15.1 256 480-784 23-286 (291)
207 3nsz_A CK II alpha, casein kin 100.0 1E-38 3.5E-43 344.4 20.1 248 480-775 41-319 (330)
208 2r3i_A Cell division protein k 100.0 2.8E-38 9.7E-43 335.9 22.6 255 480-783 8-293 (299)
209 3sv0_A Casein kinase I-like; t 100.0 1.9E-38 6.7E-43 357.6 21.8 259 480-780 12-276 (483)
210 3fme_A Dual specificity mitoge 100.0 9.1E-39 3.1E-43 338.0 17.7 248 479-775 11-266 (290)
211 4e7w_A Glycogen synthase kinas 100.0 1.9E-38 6.4E-43 350.7 20.6 252 478-781 43-329 (394)
212 1j1b_A Glycogen synthase kinas 100.0 2.3E-38 7.8E-43 352.9 21.1 247 477-775 56-336 (420)
213 3qyz_A Mitogen-activated prote 100.0 3.1E-38 1E-42 345.6 21.3 257 480-776 32-314 (364)
214 2fst_X Mitogen-activated prote 100.0 2.2E-38 7.5E-43 346.4 19.8 250 480-776 34-312 (367)
215 2x7f_A TRAF2 and NCK-interacti 100.0 2.5E-38 8.4E-43 340.8 19.7 245 480-775 29-286 (326)
216 3q60_A ROP5B; pseudokinase, tr 100.0 2.6E-39 8.9E-44 355.0 12.3 249 479-775 66-352 (371)
217 2i6l_A Mitogen-activated prote 100.0 2.5E-38 8.6E-43 339.4 19.5 261 480-780 16-312 (320)
218 1q8y_A SR protein kinase; tran 100.0 3.2E-38 1.1E-42 346.5 20.7 249 480-775 24-333 (373)
219 2ycf_A Serine/threonine-protei 100.0 9.8E-39 3.4E-43 343.4 15.9 245 479-775 14-274 (322)
220 3eb0_A Putative uncharacterize 100.0 3.7E-38 1.3E-42 347.3 20.8 245 479-775 11-321 (383)
221 2wei_A Calmodulin-domain prote 100.0 3.9E-38 1.3E-42 332.9 20.1 244 480-775 27-276 (287)
222 2pml_X PFPK7, Ser/Thr protein 100.0 1.1E-38 3.9E-43 346.7 16.1 243 479-775 35-322 (348)
223 3an0_A Dual specificity mitoge 100.0 1.3E-38 4.5E-43 345.1 16.3 248 479-775 55-310 (340)
224 4exu_A Mitogen-activated prote 100.0 5.4E-38 1.9E-42 344.4 21.3 251 479-776 46-324 (371)
225 2j0j_A Focal adhesion kinase 1 100.0 3.7E-38 1.3E-42 369.2 21.1 253 477-781 392-650 (656)
226 3pg1_A Mitogen-activated prote 100.0 3.9E-38 1.3E-42 344.5 19.7 255 480-776 27-317 (362)
227 1z57_A Dual specificity protei 100.0 7.2E-38 2.5E-42 338.6 21.4 253 480-776 19-329 (339)
228 2vwi_A Serine/threonine-protei 100.0 3.8E-39 1.3E-43 343.2 10.9 257 479-775 19-287 (303)
229 2y4i_B KSR2, HKSR2, kinase sup 100.0 5.3E-39 1.8E-43 344.9 12.0 257 479-784 37-304 (319)
230 3fhr_A MAP kinase-activated pr 100.0 1.9E-38 6.6E-43 343.1 16.3 249 477-775 31-287 (336)
231 3cek_A Dual specificity protei 100.0 6.4E-38 2.2E-42 335.6 19.7 246 480-776 33-293 (313)
232 1zy4_A Serine/threonine-protei 100.0 9.6E-38 3.3E-42 332.0 19.4 259 479-775 10-283 (303)
233 2b9h_A MAP kinase FUS3, mitoge 100.0 9.6E-38 3.3E-42 340.1 19.7 267 480-780 16-312 (353)
234 3e3p_A Protein kinase, putativ 100.0 1.5E-37 5.2E-42 339.5 21.4 248 480-776 28-315 (360)
235 2vx3_A Dual specificity tyrosi 100.0 2.7E-37 9.1E-42 340.4 23.4 192 480-715 59-261 (382)
236 1blx_A Cyclin-dependent kinase 100.0 1.3E-37 4.4E-42 335.1 19.3 247 479-775 15-296 (326)
237 3p23_A Serine/threonine-protei 100.0 8.9E-38 3E-42 348.7 18.2 247 478-775 27-283 (432)
238 3coi_A Mitogen-activated prote 100.0 2.5E-37 8.5E-42 336.9 20.8 250 480-776 29-306 (353)
239 3a99_A Proto-oncogene serine/t 100.0 2.3E-38 8E-43 340.1 12.5 235 479-775 47-293 (320)
240 2iwi_A Serine/threonine-protei 100.0 5.1E-38 1.7E-42 336.2 14.8 236 479-776 35-284 (312)
241 2eu9_A Dual specificity protei 100.0 2.9E-37 9.9E-42 336.3 20.8 252 480-775 24-333 (355)
242 3aln_A Dual specificity mitoge 100.0 7E-38 2.4E-42 337.5 15.6 250 479-775 26-285 (327)
243 2rio_A Serine/threonine-protei 100.0 9.7E-38 3.3E-42 349.4 17.2 249 480-775 20-295 (434)
244 2dyl_A Dual specificity mitoge 100.0 3.3E-37 1.1E-41 330.6 18.9 247 478-775 28-283 (318)
245 1ogq_A PGIP-2, polygalacturona 100.0 1.5E-36 5.1E-41 324.7 17.2 255 29-291 2-312 (313)
246 3uqc_A Probable conserved tran 100.0 3.1E-36 1.1E-40 317.8 18.0 223 480-783 36-266 (286)
247 3qa8_A MGC80376 protein; kinas 100.0 3.6E-37 1.2E-41 354.4 11.0 255 479-773 18-295 (676)
248 2pzi_A Probable serine/threoni 100.0 7.1E-36 2.4E-40 353.3 19.0 232 480-779 85-325 (681)
249 3m2w_A MAP kinase-activated pr 100.0 1.2E-35 4.1E-40 315.8 17.4 222 480-776 23-257 (299)
250 3dzo_A Rhoptry kinase domain; 100.0 4.4E-36 1.5E-40 333.7 12.1 238 480-775 83-363 (413)
251 2vuw_A Serine/threonine-protei 100.0 1E-35 3.5E-40 321.8 12.2 235 478-774 23-329 (336)
252 3rgz_A Protein brassinosteroid 100.0 1.8E-30 6.1E-35 311.6 18.1 241 27-280 6-280 (768)
253 4azs_A Methyltransferase WBDD; 100.0 2.2E-31 7.5E-36 306.2 6.8 186 482-712 241-438 (569)
254 4fcg_A Uncharacterized protein 100.0 3.2E-30 1.1E-34 277.3 11.1 250 27-282 21-290 (328)
255 3rgz_A Protein brassinosteroid 100.0 1E-29 3.5E-34 305.0 16.3 215 77-293 462-750 (768)
256 4eco_A Uncharacterized protein 100.0 9E-30 3.1E-34 298.6 10.1 240 30-281 27-389 (636)
257 4ecn_A Leucine-rich repeat pro 100.0 2.2E-29 7.4E-34 300.8 11.4 236 29-281 265-631 (876)
258 2o6q_A Variable lymphocyte rec 99.9 3.6E-26 1.2E-30 238.8 20.1 216 61-286 2-222 (270)
259 1ozn_A Reticulon 4 receptor; N 99.9 1.8E-25 6.1E-30 235.5 16.1 207 80-287 31-243 (285)
260 3en9_A Glycoprotease, O-sialog 99.9 3.2E-26 1.1E-30 261.7 6.3 188 480-712 341-538 (540)
261 3zyj_A Leucine-rich repeat-con 99.9 3.4E-25 1.1E-29 248.5 13.9 206 81-288 64-298 (440)
262 2z62_A TOLL-like receptor 4, v 99.9 1.8E-24 6E-29 226.7 18.2 205 80-286 27-241 (276)
263 2z66_A Variable lymphocyte rec 99.9 1.3E-24 4.3E-29 231.5 16.9 224 62-286 5-265 (306)
264 3m19_A Variable lymphocyte rec 99.9 3.6E-24 1.2E-28 221.1 17.9 192 62-265 3-198 (251)
265 2z80_A TOLL-like receptor 2, v 99.9 3.2E-24 1.1E-28 233.2 15.2 223 61-286 27-318 (353)
266 3zyi_A Leucine-rich repeat-con 99.9 7.6E-24 2.6E-28 238.3 18.6 221 66-288 56-309 (452)
267 4fcg_A Uncharacterized protein 99.9 2.1E-24 7.3E-29 231.8 13.0 189 74-266 97-297 (328)
268 1p9a_G Platelet glycoprotein I 99.9 1.4E-23 4.7E-28 221.3 18.9 200 80-286 9-212 (290)
269 1ozn_A Reticulon 4 receptor; N 99.9 5.2E-24 1.8E-28 224.2 15.5 210 74-284 49-263 (285)
270 2o6q_A Variable lymphocyte rec 99.9 7.1E-23 2.4E-27 213.7 20.9 199 65-264 17-223 (270)
271 3v47_A TOLL-like receptor 5B a 99.9 3E-23 1E-27 233.7 16.7 122 164-286 286-412 (455)
272 3zyi_A Leucine-rich repeat-con 99.9 1E-22 3.5E-27 229.1 19.9 191 84-279 57-276 (452)
273 1ogq_A PGIP-2, polygalacturona 99.9 2.9E-24 1E-28 229.3 6.5 186 74-261 94-307 (313)
274 2z62_A TOLL-like receptor 4, v 99.9 6.5E-23 2.2E-27 214.8 16.5 191 74-265 45-243 (276)
275 2id5_A Lingo-1, leucine rich r 99.9 6.7E-23 2.3E-27 232.3 15.8 211 76-287 51-338 (477)
276 1zar_A RIO2 kinase; serine kin 99.9 1.9E-23 6.5E-28 219.0 9.9 130 480-626 95-242 (282)
277 3oja_B Anopheles plasmodium-re 99.9 1.1E-22 3.7E-27 237.0 16.6 130 81-210 75-204 (597)
278 2xwt_C Thyrotropin receptor; s 99.9 9.6E-23 3.3E-27 208.7 13.9 194 80-279 30-236 (239)
279 3j0a_A TOLL-like receptor 5; m 99.9 1.1E-22 3.6E-27 246.6 16.6 209 75-288 284-566 (844)
280 1wwl_A Monocyte differentiatio 99.9 2.8E-23 9.6E-28 221.7 9.6 197 80-282 94-309 (312)
281 1p9a_G Platelet glycoprotein I 99.9 2.9E-22 1E-26 211.1 17.0 178 80-262 30-211 (290)
282 1xku_A Decorin; proteoglycan, 99.9 8.7E-22 3E-26 211.8 20.8 213 62-280 29-251 (330)
283 1ziw_A TOLL-like receptor 3; i 99.9 2.6E-22 9E-27 237.8 17.2 211 76-287 400-627 (680)
284 2ft3_A Biglycan; proteoglycan, 99.9 1E-21 3.5E-26 211.5 19.6 213 63-280 32-275 (332)
285 3zyj_A Leucine-rich repeat-con 99.9 7.6E-22 2.6E-26 221.1 19.2 188 86-279 48-241 (440)
286 3vq2_A TLR4, TOLL-like recepto 99.9 1.4E-22 4.7E-27 236.9 13.5 209 77-288 346-564 (606)
287 2o6s_A Variable lymphocyte rec 99.9 2.8E-22 9.6E-27 200.5 13.6 177 62-266 5-185 (208)
288 3oja_B Anopheles plasmodium-re 99.9 5.8E-22 2E-26 230.8 18.1 212 69-285 87-361 (597)
289 3oja_A Leucine-rich immune mol 99.9 6.4E-23 2.2E-27 232.4 9.6 198 82-284 35-252 (487)
290 3t6q_A CD180 antigen; protein- 99.9 2.2E-22 7.4E-27 235.2 14.3 208 77-286 346-564 (606)
291 3o6n_A APL1; leucine-rich repe 99.9 4.4E-22 1.5E-26 219.4 16.0 129 80-208 68-196 (390)
292 2z81_A CD282 antigen, TOLL-lik 99.9 4E-22 1.4E-26 230.1 15.7 197 63-261 3-211 (549)
293 3rfs_A Internalin B, repeat mo 99.9 1.7E-21 6E-26 203.4 19.0 180 80-264 40-223 (272)
294 3o6n_A APL1; leucine-rich repe 99.9 1.1E-21 3.7E-26 216.3 18.1 208 73-285 85-355 (390)
295 3rfs_A Internalin B, repeat mo 99.9 8.4E-22 2.9E-26 205.8 15.9 180 77-266 59-242 (272)
296 2ft3_A Biglycan; proteoglycan, 99.9 2.2E-21 7.4E-26 209.0 19.6 206 73-283 70-308 (332)
297 3v47_A TOLL-like receptor 5B a 99.9 9.4E-22 3.2E-26 221.4 17.1 117 76-192 49-169 (455)
298 3m19_A Variable lymphocyte rec 99.9 3E-21 1E-25 199.1 19.3 172 65-236 15-194 (251)
299 4glp_A Monocyte differentiatio 99.9 2.3E-22 8E-27 214.3 10.5 197 81-282 91-307 (310)
300 4eco_A Uncharacterized protein 99.9 1.9E-22 6.4E-27 236.5 9.5 203 74-280 199-444 (636)
301 3cvr_A Invasion plasmid antige 99.9 6.6E-22 2.3E-26 226.0 12.8 198 52-282 32-243 (571)
302 1wwl_A Monocyte differentiatio 99.9 3.8E-22 1.3E-26 212.9 9.9 178 78-261 118-311 (312)
303 2id5_A Lingo-1, leucine rich r 99.9 1.5E-21 5E-26 221.3 15.0 213 66-279 13-234 (477)
304 3o53_A Protein LRIM1, AGAP0063 99.9 2.5E-22 8.5E-27 214.8 8.2 192 80-284 57-252 (317)
305 3a79_B TLR6, VLRB.59, TOLL-lik 99.9 1.2E-21 4.2E-26 226.6 14.0 159 126-287 350-515 (562)
306 1xku_A Decorin; proteoglycan, 99.9 8.2E-21 2.8E-25 204.2 19.0 208 69-281 64-275 (330)
307 2z66_A Variable lymphocyte rec 99.9 9.2E-22 3.1E-26 209.3 10.7 182 80-263 77-265 (306)
308 2z7x_B TOLL-like receptor 1, v 99.9 2.7E-21 9.1E-26 221.6 15.0 159 126-287 321-486 (520)
309 2z80_A TOLL-like receptor 2, v 99.9 2.6E-22 8.7E-27 218.2 6.1 196 68-264 63-319 (353)
310 4ecn_A Leucine-rich repeat pro 99.8 8.1E-22 2.8E-26 235.6 10.5 201 74-280 441-684 (876)
311 3e6j_A Variable lymphocyte rec 99.8 4.1E-20 1.4E-24 187.6 17.5 161 60-263 15-176 (229)
312 2z81_A CD282 antigen, TOLL-lik 99.8 4.7E-21 1.6E-25 221.1 11.5 198 81-286 310-514 (549)
313 3oja_A Leucine-rich immune mol 99.8 6.9E-22 2.4E-26 223.8 4.3 183 76-263 53-255 (487)
314 1ziw_A TOLL-like receptor 3; i 99.8 3.5E-20 1.2E-24 219.5 18.3 201 80-280 24-259 (680)
315 2o6s_A Variable lymphocyte rec 99.8 3.8E-20 1.3E-24 185.0 15.5 171 64-243 14-187 (208)
316 3t6q_A CD180 antigen; protein- 99.8 2.8E-20 9.6E-25 217.3 16.6 156 80-235 32-193 (606)
317 3a79_B TLR6, VLRB.59, TOLL-lik 99.8 2.3E-20 7.7E-25 216.0 14.6 161 102-264 350-515 (562)
318 2z7x_B TOLL-like receptor 1, v 99.8 1.4E-20 4.7E-25 215.7 12.4 161 102-264 321-486 (520)
319 3vq2_A TLR4, TOLL-like recepto 99.8 5.3E-20 1.8E-24 214.9 16.9 197 61-259 4-217 (606)
320 2z63_A TOLL-like receptor 4, v 99.8 2.3E-20 7.9E-25 216.2 13.1 203 81-287 325-536 (570)
321 4glp_A Monocyte differentiatio 99.8 9.7E-21 3.3E-25 201.7 8.9 177 78-260 114-308 (310)
322 4ay9_X Follicle-stimulating ho 99.8 7E-20 2.4E-24 198.6 14.6 213 64-279 9-233 (350)
323 4g8a_A TOLL-like receptor 4; l 99.8 8.4E-20 2.9E-24 214.1 16.3 198 62-261 25-239 (635)
324 3j0a_A TOLL-like receptor 5; m 99.8 1.6E-19 5.4E-24 218.7 17.3 116 78-193 45-164 (844)
325 2xwt_C Thyrotropin receptor; s 99.8 6.3E-20 2.1E-24 187.7 11.6 178 74-257 48-237 (239)
326 3cvr_A Invasion plasmid antige 99.8 2.1E-19 7.1E-24 205.4 16.2 162 81-265 80-249 (571)
327 1h6u_A Internalin H; cell adhe 99.8 2.7E-19 9.2E-24 190.3 15.8 188 80-281 40-229 (308)
328 3o53_A Protein LRIM1, AGAP0063 99.8 2.6E-20 8.8E-25 199.1 7.9 188 80-280 33-225 (317)
329 2xot_A Amphoterin-induced prot 99.8 1.5E-19 5.2E-24 196.7 14.0 174 85-262 22-205 (361)
330 2v70_A SLIT-2, SLIT homolog 2 99.8 7.6E-20 2.6E-24 184.4 10.5 147 85-234 15-166 (220)
331 2v9t_B SLIT homolog 2 protein 99.8 3.1E-19 1.1E-23 180.0 14.9 147 90-261 20-167 (220)
332 2z63_A TOLL-like receptor 4, v 99.8 2.4E-19 8.4E-24 207.6 15.7 153 82-234 29-190 (570)
333 2v70_A SLIT-2, SLIT homolog 2 99.8 5.2E-19 1.8E-23 178.3 15.4 151 109-263 15-170 (220)
334 4b8c_D Glucose-repressible alc 99.8 1.2E-20 4E-25 223.5 3.8 222 31-269 130-364 (727)
335 2xot_A Amphoterin-induced prot 99.8 1.8E-19 6.2E-24 196.1 12.0 176 108-287 21-207 (361)
336 2v9t_B SLIT homolog 2 protein 99.8 2.3E-19 7.8E-24 180.9 11.8 156 108-288 14-171 (220)
337 1h6u_A Internalin H; cell adhe 99.8 6.8E-19 2.3E-23 187.1 14.8 172 77-261 59-232 (308)
338 1zth_A RIO1 serine protein kin 99.8 2.3E-19 7.7E-24 185.6 10.2 134 480-627 52-220 (258)
339 4fmz_A Internalin; leucine ric 99.8 1.2E-18 4.1E-23 188.6 16.3 192 79-280 130-344 (347)
340 4g8a_A TOLL-like receptor 4; l 99.8 4.9E-19 1.7E-23 207.6 14.3 218 48-279 8-234 (635)
341 1h6t_A Internalin B; cell adhe 99.8 1.6E-18 5.4E-23 182.7 15.2 168 80-260 45-214 (291)
342 3bz5_A Internalin-J, INLJ; leu 99.8 1.1E-17 3.8E-22 187.6 20.6 182 77-279 60-243 (457)
343 3bz5_A Internalin-J, INLJ; leu 99.8 9.5E-18 3.2E-22 188.2 19.5 182 80-280 41-223 (457)
344 1o6v_A Internalin A; bacterial 99.8 2.7E-18 9.3E-23 193.7 15.0 189 77-279 173-363 (466)
345 1w8a_A SLIT protein; signaling 99.8 1.3E-18 4.5E-23 171.4 10.3 124 85-211 12-139 (192)
346 1jl5_A Outer protein YOPM; leu 99.7 1.4E-18 4.7E-23 194.8 10.1 149 76-234 29-208 (454)
347 1w8a_A SLIT protein; signaling 99.7 8.9E-18 3E-22 165.4 12.8 131 108-241 11-146 (192)
348 1o6v_A Internalin A; bacterial 99.7 1.7E-17 5.8E-22 187.2 16.6 190 77-281 152-343 (466)
349 4ezg_A Putative uncharacterize 99.7 4.9E-18 1.7E-22 168.1 9.8 150 82-260 45-195 (197)
350 1jl5_A Outer protein YOPM; leu 99.7 6.9E-17 2.4E-21 181.0 19.7 140 105-260 131-271 (454)
351 1m9s_A Internalin B; cell inva 99.7 1.3E-17 4.5E-22 192.6 14.0 170 80-262 42-213 (605)
352 3g06_A SSPH2 (leucine-rich rep 99.7 1.1E-17 3.6E-22 193.6 13.1 186 50-260 9-195 (622)
353 3e6j_A Variable lymphocyte rec 99.7 3.1E-17 1.1E-21 166.4 14.0 143 64-210 26-171 (229)
354 3g06_A SSPH2 (leucine-rich rep 99.7 6E-17 2.1E-21 187.3 17.6 180 80-281 80-296 (622)
355 1xeu_A Internalin C; cellular 99.7 1.3E-17 4.3E-22 173.0 10.6 167 81-261 19-187 (263)
356 4fmz_A Internalin; leucine ric 99.7 8.6E-17 3E-21 173.9 17.7 190 78-280 63-254 (347)
357 4ezg_A Putative uncharacterize 99.7 2.5E-17 8.6E-22 162.9 11.0 131 77-211 62-194 (197)
358 4b8c_D Glucose-repressible alc 99.7 5.1E-18 1.7E-22 200.9 6.9 150 96-256 215-369 (727)
359 3goz_A Leucine-rich repeat-con 99.7 7E-19 2.4E-23 191.6 -0.5 200 80-279 21-263 (362)
360 2ca6_A RAN GTPase-activating p 99.7 2.9E-19 1E-23 196.5 -4.2 205 78-282 57-316 (386)
361 1h6t_A Internalin B; cell adhe 99.7 4.3E-17 1.5E-21 171.7 12.2 184 84-281 27-212 (291)
362 2ast_B S-phase kinase-associat 99.7 6.3E-19 2.1E-23 189.9 -2.3 173 82-256 71-257 (336)
363 2ca6_A RAN GTPase-activating p 99.7 7.5E-19 2.6E-23 193.2 -2.1 200 80-280 31-285 (386)
364 2ast_B S-phase kinase-associat 99.7 1.9E-18 6.6E-23 186.0 0.8 207 62-280 35-258 (336)
365 1m9s_A Internalin B; cell inva 99.7 3E-17 1E-21 189.6 10.7 186 82-281 22-209 (605)
366 3goz_A Leucine-rich repeat-con 99.7 2.7E-18 9.4E-23 186.9 0.3 196 85-280 2-236 (362)
367 1xeu_A Internalin C; cellular 99.7 2.7E-17 9.4E-22 170.4 7.5 169 103-283 17-186 (263)
368 4ay9_X Follicle-stimulating ho 99.7 8.5E-17 2.9E-21 174.2 11.3 212 67-284 40-260 (350)
369 2o6r_A Variable lymphocyte rec 99.7 3.2E-16 1.1E-20 152.1 13.5 134 62-215 5-141 (177)
370 2ell_A Acidic leucine-rich nuc 99.7 1.4E-16 4.9E-21 153.1 10.5 130 80-211 23-160 (168)
371 4gyi_A RIO2 kinase; protein ki 99.7 2.6E-17 9E-22 176.6 5.1 138 477-627 97-266 (397)
372 2ell_A Acidic leucine-rich nuc 99.6 2E-16 6.9E-21 152.0 8.6 134 104-260 23-161 (168)
373 2wfh_A SLIT homolog 2 protein 99.6 1.4E-15 4.8E-20 149.7 14.4 107 85-195 14-120 (193)
374 1dce_A Protein (RAB geranylger 99.6 7.3E-19 2.5E-23 201.9 -10.8 176 82-265 350-552 (567)
375 2je0_A Acidic leucine-rich nuc 99.6 2.8E-16 9.7E-21 147.7 7.6 125 80-206 16-148 (149)
376 2o6r_A Variable lymphocyte rec 99.6 3.2E-15 1.1E-19 144.9 14.2 129 107-238 9-141 (177)
377 2wfh_A SLIT homolog 2 protein 99.6 2.6E-15 8.8E-20 147.8 13.2 129 62-191 8-140 (193)
378 2je0_A Acidic leucine-rich nuc 99.6 9.8E-16 3.3E-20 144.0 7.5 130 104-255 16-149 (149)
379 1z7x_W Ribonuclease inhibitor; 99.6 5.9E-17 2E-21 182.4 -4.8 201 80-280 169-409 (461)
380 1z7x_W Ribonuclease inhibitor; 99.5 1.1E-16 3.7E-21 180.3 -6.2 111 80-190 112-240 (461)
381 1a9n_A U2A', U2A'; complex (nu 99.5 1.2E-14 4E-19 140.8 8.9 132 100-259 14-153 (176)
382 1a9n_A U2A', U2A'; complex (nu 99.5 7.8E-15 2.7E-19 142.1 6.8 126 80-211 18-153 (176)
383 3g39_A Variable lymphocyte rec 99.5 7.2E-14 2.5E-18 134.4 13.2 104 85-191 13-116 (170)
384 1dce_A Protein (RAB geranylger 99.5 3E-14 1E-18 163.5 11.6 117 107-228 443-567 (567)
385 2r9u_A Variable lymphocyte rec 99.5 9.5E-14 3.2E-18 134.0 12.9 105 84-191 15-119 (174)
386 1ds9_A Outer arm dynein; leuci 99.5 8E-17 2.7E-21 159.4 -9.3 148 106-259 19-185 (198)
387 3g39_A Variable lymphocyte rec 99.5 1.9E-13 6.4E-18 131.4 11.8 86 107-195 11-96 (170)
388 1ds9_A Outer arm dynein; leuci 99.5 1.1E-16 3.6E-21 158.5 -11.9 147 81-234 18-185 (198)
389 2r9u_A Variable lymphocyte rec 99.4 3.5E-13 1.2E-17 130.0 11.8 100 108-210 15-117 (174)
390 2ifg_A High affinity nerve gro 99.4 2.1E-13 7.3E-18 147.2 11.0 108 64-191 8-117 (347)
391 2ifg_A High affinity nerve gro 99.3 1.3E-12 4.6E-17 140.9 9.9 87 108-196 11-99 (347)
392 3sb4_A Hypothetical leucine ri 99.3 1.9E-12 6.7E-17 138.6 9.6 182 80-265 48-316 (329)
393 3tm0_A Aminoglycoside 3'-phosp 99.2 1.2E-11 4.2E-16 127.7 10.0 134 481-625 20-213 (263)
394 3un9_A NLR family member X1; l 99.2 2.9E-13 1E-17 147.0 -4.9 131 129-260 101-253 (372)
395 3sb4_A Hypothetical leucine ri 99.2 2.2E-11 7.4E-16 130.4 9.6 195 81-280 25-308 (329)
396 3un9_A NLR family member X1; l 99.2 1.4E-13 4.7E-18 149.7 -8.5 163 81-243 72-261 (372)
397 1nd4_A Aminoglycoside 3'-phosp 99.2 5.6E-11 1.9E-15 122.4 9.1 127 484-626 29-215 (264)
398 3ogk_B Coronatine-insensitive 99.1 3.5E-13 1.2E-17 156.5 -8.6 202 79-280 291-524 (592)
399 3ogk_B Coronatine-insensitive 99.1 1.2E-11 4.2E-16 143.5 0.4 130 80-211 163-306 (592)
400 3dxp_A Putative acyl-COA dehyd 99.0 4.9E-10 1.7E-14 121.4 10.1 137 481-625 44-248 (359)
401 4fdw_A Leucine rich hypothetic 99.0 1.6E-09 5.4E-14 118.7 14.2 166 82-254 136-308 (401)
402 4fdw_A Leucine rich hypothetic 99.0 3.2E-09 1.1E-13 116.3 13.2 198 73-280 150-356 (401)
403 2p1m_B Transport inhibitor res 98.9 9.4E-12 3.2E-16 144.5 -8.4 198 80-279 288-516 (594)
404 3sg8_A APH(2'')-ID; antibiotic 98.9 1.3E-09 4.5E-14 115.0 8.7 133 481-626 26-224 (304)
405 2p1m_B Transport inhibitor res 98.9 1.1E-10 3.7E-15 135.5 -1.7 175 81-256 105-324 (594)
406 2ra8_A Uncharacterized protein 98.8 5.6E-10 1.9E-14 120.2 2.2 177 80-260 106-321 (362)
407 3rw6_A Nuclear RNA export fact 98.8 1.4E-10 4.8E-15 118.5 -4.4 65 127-193 168-236 (267)
408 3r70_A Aminoglycoside phosphot 98.7 8E-08 2.7E-12 102.0 12.0 130 480-626 42-238 (320)
409 2ra8_A Uncharacterized protein 98.6 4.7E-09 1.6E-13 112.9 1.3 173 80-257 138-341 (362)
410 3tdw_A Gentamicin resistance p 98.5 6.3E-07 2.2E-11 94.4 14.1 133 481-626 25-225 (306)
411 3d1u_A Putative fructosamine-3 98.5 7.5E-07 2.6E-11 92.7 12.0 74 481-558 21-97 (288)
412 1io0_A Tropomodulin; LRR prote 98.4 1.9E-08 6.6E-13 97.6 -0.9 94 98-191 29-137 (185)
413 3rw6_A Nuclear RNA export fact 98.4 1.3E-07 4.5E-12 96.5 4.3 80 102-183 167-257 (267)
414 4gkh_A Aminoglycoside 3'-phosp 98.4 1.9E-06 6.4E-11 88.9 12.8 132 483-626 32-224 (272)
415 3ovc_A Hygromycin-B 4-O-kinase 98.3 1.4E-06 4.9E-11 93.8 10.5 73 481-559 47-122 (362)
416 1io0_A Tropomodulin; LRR prote 98.3 5.6E-08 1.9E-12 94.3 -1.2 111 80-190 35-164 (185)
417 3ats_A Putative uncharacterize 98.2 1.2E-06 4E-11 94.5 7.1 79 481-559 26-121 (357)
418 2q83_A YTAA protein; 2635576, 98.1 4.2E-05 1.4E-09 81.5 15.0 139 482-625 39-252 (346)
419 2olc_A MTR kinase, methylthior 98.0 1.5E-05 5.2E-10 87.1 11.3 74 481-556 36-120 (397)
420 4fs7_A Uncharacterized protein 97.8 0.00014 4.8E-09 79.2 14.4 182 69-258 59-265 (394)
421 4fs7_A Uncharacterized protein 97.8 9.9E-05 3.4E-09 80.4 11.5 177 74-256 155-353 (394)
422 3f7w_A Putative fructosamine-3 97.7 9.6E-05 3.3E-09 76.8 9.0 74 481-558 21-97 (288)
423 2pyw_A Uncharacterized protein 97.6 0.00024 8.2E-09 78.1 11.9 72 481-555 40-122 (420)
424 4gt6_A Cell surface protein; l 97.6 0.00013 4.4E-09 79.5 9.1 137 92-234 252-391 (394)
425 4gt6_A Cell surface protein; l 97.6 0.00037 1.3E-08 75.9 12.5 82 172-256 260-344 (394)
426 3jr1_A Putative fructosamine-3 97.5 0.0006 2.1E-08 71.3 12.4 136 481-621 42-232 (312)
427 3dxq_A Choline/ethanolamine ki 97.4 0.00031 1.1E-08 73.3 9.2 71 481-559 24-96 (301)
428 1zyl_A Hypothetical protein YI 97.3 0.0015 5E-08 69.0 13.3 140 482-625 33-223 (328)
429 3e4g_A ATP synthase subunit S, 97.3 4.4E-05 1.5E-09 72.2 0.6 34 82-115 62-95 (176)
430 3e4g_A ATP synthase subunit S, 97.3 7.3E-05 2.5E-09 70.7 1.9 87 105-191 61-154 (176)
431 3csv_A Aminoglycoside phosphot 97.2 0.0015 5E-08 69.2 12.0 140 482-626 25-218 (333)
432 2ppq_A HSK, HK, homoserine kin 97.2 0.0015 5.2E-08 68.7 11.9 142 481-625 28-217 (322)
433 3feg_A Choline/ethanolamine ki 97.2 0.0011 3.7E-08 71.4 10.6 140 481-625 56-254 (379)
434 4h09_A Hypothetical leucine ri 97.2 0.0011 3.6E-08 71.7 10.7 142 96-243 208-353 (379)
435 1nw1_A Choline kinase (49.2 KD 97.2 0.00095 3.2E-08 73.4 9.8 72 481-558 79-159 (429)
436 1pgv_A TMD-1, tropomodulin TMD 97.1 7.6E-05 2.6E-09 71.9 0.3 87 101-187 37-136 (197)
437 3rfe_A Platelet glycoprotein I 97.1 0.00058 2E-08 61.4 6.0 57 202-260 12-69 (130)
438 4h09_A Hypothetical leucine ri 97.1 0.0019 6.4E-08 69.7 10.6 151 100-256 189-343 (379)
439 2yle_A Protein spire homolog 1 97.0 0.0036 1.2E-07 60.6 11.1 99 556-708 33-132 (229)
440 3c5i_A Choline kinase; choline 97.0 0.001 3.4E-08 71.7 7.7 73 481-558 39-121 (369)
441 1pgv_A TMD-1, tropomodulin TMD 96.8 0.00021 7.3E-09 68.8 0.3 110 80-189 40-169 (197)
442 3i1a_A Spectinomycin phosphotr 96.8 0.0026 8.9E-08 67.5 8.7 68 484-558 32-108 (339)
443 3rfe_A Platelet glycoprotein I 96.8 0.0021 7.1E-08 57.7 6.6 56 133-190 12-68 (130)
444 2qg7_A Ethanolamine kinase PV0 96.7 0.0068 2.3E-07 66.9 11.9 73 481-558 114-188 (458)
445 3f2s_A CK, chetk-alpha, cholin 96.4 0.0083 2.8E-07 64.7 9.3 140 482-625 59-280 (401)
446 3mes_A Choline kinase; malaria 96.0 0.009 3.1E-07 65.1 7.0 139 481-625 76-291 (424)
447 2k1k_A Ephrin type-A receptor 93.7 0.015 5.2E-07 39.1 0.6 31 340-370 5-35 (38)
448 3g15_A CK, chetk-alpha, cholin 93.3 0.17 5.8E-06 54.7 8.5 29 597-625 246-280 (401)
449 2l2t_A Receptor tyrosine-prote 90.0 0.087 3E-06 36.4 0.9 11 351-361 12-22 (44)
450 2ks1_B Epidermal growth factor 89.5 0.11 3.8E-06 36.0 1.1 11 351-361 13-23 (44)
451 2ks1_B Epidermal growth factor 88.6 0.2 6.7E-06 34.8 1.8 23 347-369 12-34 (44)
452 2l2t_A Receptor tyrosine-prote 88.0 0.13 4.3E-06 35.6 0.6 27 345-371 9-35 (44)
453 4ann_A ESSB; membrane protein, 84.6 3.8 0.00013 39.4 9.2 85 529-624 43-127 (215)
454 2k9y_A Ephrin type-A receptor 84.0 0.33 1.1E-05 33.3 1.1 15 349-363 13-27 (41)
455 4ano_A ESSB; membrane protein, 81.9 4.4 0.00015 39.1 8.5 87 529-627 48-135 (219)
456 2jwa_A Receptor tyrosine-prote 80.4 0.25 8.6E-06 34.1 -0.6 7 348-354 14-20 (44)
457 2klu_A T-cell surface glycopro 72.4 1.6 5.4E-05 32.6 1.7 28 351-378 12-40 (70)
458 3cxl_A N-chimerin; SH2, RHO-GA 69.9 0.53 1.8E-05 51.8 -2.0 54 488-541 152-214 (463)
459 2x6h_A GH13170P, VPS34, phosph 69.8 91 0.0031 35.5 16.3 85 535-624 477-575 (696)
460 2jwa_A Receptor tyrosine-prote 66.5 1.8 6.2E-05 29.8 0.9 13 349-362 12-24 (44)
461 3ls8_A Phosphatidylinositol 3- 61.6 1.2E+02 0.0042 33.9 15.0 86 534-624 402-501 (614)
462 2l34_A TYRO protein tyrosine k 54.7 3.6 0.00012 26.5 0.7 26 343-368 4-29 (33)
463 2lz0_A Uncharacterized protein 48.1 31 0.001 28.6 5.7 38 123-161 14-51 (100)
464 2knc_B Integrin beta-3; transm 42.2 5.7 0.0002 31.5 0.2 24 348-371 10-33 (79)
465 1afo_A Glycophorin A; integral 39.3 7.6 0.00026 25.6 0.4 28 344-371 8-35 (40)
466 2lz0_A Uncharacterized protein 38.8 61 0.0021 26.7 6.1 50 90-140 5-54 (100)
467 1cja_A Protein (actin-fragmin 29.2 2.3E+02 0.0078 29.0 9.6 75 545-626 156-238 (342)
468 2k1a_A Integrin alpha-IIB; sin 26.7 24 0.00081 24.1 1.2 22 349-370 11-32 (42)
469 2l8s_A Integrin alpha-1; trans 25.3 26 0.0009 25.2 1.3 21 350-370 11-31 (54)
470 1cd1_A CD1, MCD1D.1; immunolog 24.6 16 0.00054 37.6 0.0 10 351-360 286-295 (315)
471 2k9j_B Integrin beta-3; transm 23.1 28 0.00095 23.9 1.0 24 348-371 9-32 (43)
472 2knc_A Integrin alpha-IIB; tra 21.8 33 0.0011 24.8 1.3 23 349-371 13-35 (54)
No 1
>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}
Probab=100.00 E-value=1.1e-53 Score=456.87 Aligned_cols=263 Identities=26% Similarity=0.369 Sum_probs=209.1
Q ss_pred ceeccccCceEEEEEEeC------CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVLE------DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||+|+||+||+|+++ +++.||||+++.......++|.+|+++|++++|||||+++|+|.+.+..|||||||
T Consensus 46 ~~~LG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 125 (329)
T 4aoj_A 46 KWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYM 125 (329)
T ss_dssp EEEEEECSSEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred EEEEccCCCcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEEcC
Confidence 468999999999999854 47899999998877777789999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCC----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcc
Q 003847 554 PNGSLANARYRKMGS----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE 623 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla 623 (791)
++|+|.++++..... ...+++|.+++.|+.||++||+|||+++||||||||+|||+++++.+||+|||++
T Consensus 126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGla 205 (329)
T 4aoj_A 126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMS 205 (329)
T ss_dssp TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC--
T ss_pred CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHHHHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEcccccc
Confidence 999999999865321 1235999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ 703 (791)
+.+...... ......+||+.|||||++.+..|+.++|||||||++|
T Consensus 206 ~~~~~~~~~----------------------------------~~~~~~~gt~~ymAPE~~~~~~~~~~sDvwS~Gvvl~ 251 (329)
T 4aoj_A 206 RDIYSTDYY----------------------------------RVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLW 251 (329)
T ss_dssp ------------------------------------------------CCCCGGGCCHHHHTTCCCCHHHHHHHHHHHHH
T ss_pred eeccCCCcc----------------------------------eecCcccccccccChhhhcCCCCCccccccchHHHHH
Confidence 876432211 0122346999999999999999999999999999999
Q ss_pred HHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 704 ELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 704 ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
||+| |+.||.+... . .....+.... ..+.+...+.++.+|+.+||+.||++|||++||++.|+.|..
T Consensus 252 Ellt~G~~Pf~~~~~---------~-~~~~~i~~g~--~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~ei~~~L~~l~~ 319 (329)
T 4aoj_A 252 EIFTYGKQPWYQLSN---------T-EAIDCITQGR--ELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHARLQALAQ 319 (329)
T ss_dssp HHHTTSCCTTCSSCH---------H-HHHHHHHHTC--CCCCCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHHHHHHHHH
T ss_pred HHHcCCCCCCCCCCH---------H-HHHHHHHcCC--CCCCcccccHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHhh
Confidence 9999 8999965321 1 1111111111 122233356788999999999999999999999999999987
Q ss_pred CCCCCc
Q 003847 783 SPSPYL 788 (791)
Q Consensus 783 ~~~p~~ 788 (791)
.|.-|+
T Consensus 320 ~pp~~l 325 (329)
T 4aoj_A 320 APPVYL 325 (329)
T ss_dssp SCC---
T ss_pred CCcccc
Confidence 776554
No 2
>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*
Probab=100.00 E-value=5.5e-54 Score=453.05 Aligned_cols=261 Identities=23% Similarity=0.366 Sum_probs=212.1
Q ss_pred ceeccccCceEEEEEEeC------CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVLE------DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||+|+||+||+|++. +++.||||+++.......++|.+|+++|++++|||||+++|+|.+++..|+|||||
T Consensus 18 ~~~lG~G~fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~~~~~~~~lV~Ey~ 97 (299)
T 4asz_A 18 KRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYM 97 (299)
T ss_dssp EEEEEC--CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSEEEEEECC
T ss_pred eeEEeeCCCcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEEeeCCEEEEEEEcC
Confidence 468999999999999853 47899999998877777789999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhc--------CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 554 PNGSLANARYRKM--------GSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 554 ~~gsL~~~l~~~~--------~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
++|+|.++++... ......++|.++..|+.||++||+|||+++||||||||+|||+++++.+||+|||+|+.
T Consensus 98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~~ 177 (299)
T 4asz_A 98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRD 177 (299)
T ss_dssp TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHHH
T ss_pred CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCccccee
Confidence 9999999997643 12233599999999999999999999999999999999999999999999999999987
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLEL 705 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~el 705 (791)
........ .....+||+.|||||++.+..|+.++|||||||++|||
T Consensus 178 ~~~~~~~~----------------------------------~~~~~~gt~~ymAPE~~~~~~~~~k~DVwS~Gvvl~El 223 (299)
T 4asz_A 178 VYSTDYYR----------------------------------VGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEI 223 (299)
T ss_dssp HTGGGCEE----------------------------------ETTTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred cCCCCcee----------------------------------ecCceecChhhcCHHHHcCCCCCchhhHHHHHHHHHHH
Confidence 64322110 01123589999999999999999999999999999999
Q ss_pred Hh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcC-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 706 LT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRAD-FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 706 lt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
+| |+.||.+... .++......+. .+.+...+.++.+|+.+||+.||++|||++||++.|+++...
T Consensus 224 lt~G~~Pf~~~~~-------------~~~~~~i~~~~~~~~p~~~~~~~~~li~~cl~~dP~~RPs~~~i~~~L~~~~~~ 290 (299)
T 4asz_A 224 FTYGKQPWYQLSN-------------NEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIKGIHTLLQNLAKA 290 (299)
T ss_dssp HTTTCCTTTTSCH-------------HHHHHHHHHTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHH
T ss_pred HcCCCCCCCCCCH-------------HHHHHHHHcCCCCCCCccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhc
Confidence 99 8999965321 11111111111 122333567889999999999999999999999999988654
Q ss_pred CCCC
Q 003847 784 PSPY 787 (791)
Q Consensus 784 ~~p~ 787 (791)
...|
T Consensus 291 ~p~~ 294 (299)
T 4asz_A 291 SPVY 294 (299)
T ss_dssp SCCC
T ss_pred CCcc
Confidence 4333
No 3
>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*
Probab=100.00 E-value=7.3e-53 Score=449.84 Aligned_cols=244 Identities=21% Similarity=0.335 Sum_probs=205.5
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.+.||+|+||+||+|+. .+|+.||||++........+.+.+|+++|++++|||||+++++|.+++..|||||||+||+|
T Consensus 79 ~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~L 158 (346)
T 4fih_A 79 FIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 158 (346)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEECCCTTEEH
T ss_pred eEEeecCcCeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCCCcH
Confidence 35799999999999995 57999999999765555556789999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++... .+++.+++.|+.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.+.....
T Consensus 159 ~~~l~~~------~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~------- 225 (346)
T 4fih_A 159 TDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------- 225 (346)
T ss_dssp HHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC-------
T ss_pred HHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCC-------
Confidence 9988753 399999999999999999999999999999999999999999999999999987643211
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+...
T Consensus 226 -----------------------------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~- 275 (346)
T 4fih_A 226 -----------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP- 275 (346)
T ss_dssp -----------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-
T ss_pred -----------------------------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH-
Confidence 12346799999999999999999999999999999999999999965421
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
......+..............+.++.+|+.+||+.||++|||++|+++
T Consensus 276 ---------~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~e~l~ 323 (346)
T 4fih_A 276 ---------LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 323 (346)
T ss_dssp ---------HHHHHHHHHSSCCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ---------HHHHHHHHcCCCCCCCccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111222222333335678899999999999999999999987
No 4
>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-52 Score=441.51 Aligned_cols=256 Identities=23% Similarity=0.367 Sum_probs=201.4
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
..+.||+|+||+||+|++++ .||||+++.. .....+.|.+|+++|++++|||||++++++. ++..+||||||++|
T Consensus 40 l~~~iG~G~fG~Vy~~~~~~--~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~-~~~~~iVmEy~~gG 116 (307)
T 3omv_A 40 LSTRIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCEGS 116 (307)
T ss_dssp EEEECCCCSSSEEEEEESSS--EEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCSSC
T ss_pred EeeEEeeCCCcEEEEEEECC--cEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEE-CCeEEEEEEcCCCC
Confidence 35689999999999998753 5999999753 3445678999999999999999999999875 46789999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.++++.... ++++.++..|+.||+.||+|||+++||||||||+|||+++++.+||+|||+|+........
T Consensus 117 sL~~~l~~~~~----~l~~~~~~~i~~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~---- 188 (307)
T 3omv_A 117 SLYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS---- 188 (307)
T ss_dssp BHHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC-----------
T ss_pred CHHHHHhhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcc----
Confidence 99999976543 4999999999999999999999999999999999999999999999999999865432111
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC---CCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS---IKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~---~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
......+||+.|||||++.+ ..|+.++|||||||++|||+||+.||.
T Consensus 189 ------------------------------~~~~~~~GT~~ymAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~ 238 (307)
T 3omv_A 189 ------------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYS 238 (307)
T ss_dssp -----------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTT
T ss_pred ------------------------------eeecccccCCCccCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCC
Confidence 11234579999999999964 468999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhh-hcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAI-RADF-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
+... ............ .+.. ......+..+.+|+.+||+.||++|||+.||++.|+.++++-
T Consensus 239 ~~~~---------~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ei~~~Le~l~~~l 302 (307)
T 3omv_A 239 HINN---------RDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TCCC---------HHHHHHHHHTTCCCCCSTTSCTTSCHHHHHHHHHHTCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CCCh---------HHHHHHHHhcCCCCCCcccccccchHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHhccC
Confidence 5321 111111111111 1111 112235577899999999999999999999999998876543
No 5
>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A
Probab=100.00 E-value=2.6e-52 Score=442.23 Aligned_cols=256 Identities=22% Similarity=0.292 Sum_probs=207.7
Q ss_pred ceeccccCceEEEEEEe------CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL------EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.+.||+|+||+||+|++ .+++.||||+++... ....++|.+|+.++++++|||||+++|+|.+++..++||||
T Consensus 31 ~~~lG~G~fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~~~~~~~~lV~Ey 110 (308)
T 4gt4_A 31 MEELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSY 110 (308)
T ss_dssp EEEEEECSSCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeccCCCcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEEEECCEEEEEEEc
Confidence 45799999999999985 357899999997643 33457899999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccC
Q 003847 553 VPNGSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFG 621 (791)
|++|+|.+++...... ....++|.++.+|+.|||+||+|||+++||||||||+|||+++++.+||+|||
T Consensus 111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DFG 190 (308)
T 4gt4_A 111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLG 190 (308)
T ss_dssp CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCSC
T ss_pred CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCcc
Confidence 9999999999764321 11359999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHH
Q 003847 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVI 701 (791)
Q Consensus 622 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvi 701 (791)
+++.+...... ......+||+.|||||++.+..|+.++|||||||+
T Consensus 191 lar~~~~~~~~----------------------------------~~~~~~~gt~~ymAPE~l~~~~~s~ksDVwSfGvv 236 (308)
T 4gt4_A 191 LFREVYAADYY----------------------------------KLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVV 236 (308)
T ss_dssp CBCGGGGGGCB----------------------------------CSSSSSCBCGGGCCHHHHHHCCCCHHHHHHHHHHH
T ss_pred cceeccCCCce----------------------------------eEecccccCCcccCHHHHhCCCCCccchhhhHHHH
Confidence 99876432111 11224569999999999999999999999999999
Q ss_pred HHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 702 LLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 702 l~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
+|||+| |+.||.+.... .....+.... ..+.+...+..+.+|+.+||+.||++|||+.||++.|+.+
T Consensus 237 l~El~t~g~~Pf~~~~~~----------~~~~~i~~~~--~~~~p~~~~~~~~~li~~C~~~dP~~RPs~~ei~~~L~a~ 304 (308)
T 4gt4_A 237 LWEVFSYGLQPYCGYSNQ----------DVVEMIRNRQ--VLPCPDDCPAWVYALMIECWNEFPSRRPRFKDIHSRLRAW 304 (308)
T ss_dssp HHHHHTTTCCTTTTCCHH----------HHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTS
T ss_pred HHHHHhCCCCCCCCCCHH----------HHHHHHHcCC--CCCCcccchHHHHHHHHHHcCCChhHCcCHHHHHHHHHhc
Confidence 999999 88999653211 1111111111 1122334667889999999999999999999999999986
Q ss_pred C
Q 003847 781 P 781 (791)
Q Consensus 781 ~ 781 (791)
.
T Consensus 305 ~ 305 (308)
T 4gt4_A 305 G 305 (308)
T ss_dssp C
T ss_pred c
Confidence 4
No 6
>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...
Probab=100.00 E-value=1.1e-52 Score=441.77 Aligned_cols=243 Identities=20% Similarity=0.260 Sum_probs=206.7
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||+|+||+||+|+. .+|+.||||++.+. .....+.+.+|+++|++++|||||+++++|++++..|+|||||+
T Consensus 36 i~~~lG~G~fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~yivmEy~~ 115 (311)
T 4aw0_A 36 FGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAK 115 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 356899999999999994 57999999999753 22345779999999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
||+|.+++.... .+++.+++.|+.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.+......
T Consensus 116 gG~L~~~i~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~-- 188 (311)
T 4aw0_A 116 NGELLKYIRKIG-----SFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQ-- 188 (311)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTC--
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCc--
Confidence 999999998764 3999999999999999999999999999999999999999999999999999976532211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||.+
T Consensus 189 --------------------------------~~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~ 236 (311)
T 4aw0_A 189 --------------------------------ARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFRA 236 (311)
T ss_dssp --------------------------------CCBCCCCSCGGGCCHHHHHHSCBCHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred --------------------------------ccccCcccCcccCCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCC
Confidence 123356899999999999999999999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
.. ..++........+..+...+.++.+|+.+||+.||++|||++|+
T Consensus 237 ~~-------------~~~~~~~i~~~~~~~p~~~s~~~~dli~~lL~~dp~~R~t~~e~ 282 (311)
T 4aw0_A 237 GN-------------EGLIFAKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEM 282 (311)
T ss_dssp SS-------------HHHHHHHHHHTCCCCCTTCCHHHHHHHHHHSCSSGGGSTTSGGG
T ss_pred CC-------------HHHHHHHHHcCCCCCCcccCHHHHHHHHHHccCCHhHCcChHHH
Confidence 31 12233333334444444466788999999999999999999986
No 7
>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*
Probab=100.00 E-value=2.5e-52 Score=444.50 Aligned_cols=261 Identities=20% Similarity=0.182 Sum_probs=207.7
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||+|+. .+|+.||||+++.... ..+|++++++++|||||++++++.+++..|||||||+||+
T Consensus 62 ~~~~lG~G~fG~Vy~a~~~~~g~~vAiK~i~~~~~-----~~~E~~il~~l~HpnIV~l~~~~~~~~~~~ivmEy~~gg~ 136 (336)
T 4g3f_A 62 HQPRVGRGSFGEVHRMKDKQTGFQCAVKKVRLEVF-----RVEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGS 136 (336)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTC-----CTHHHHTTTTCCCTTBCCEEEEEEETTEEEEEECCCTTCB
T ss_pred eCcEeccCCCeEEEEEEECCCCCEEEEEEECHHHh-----HHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeccCCCc
Confidence 346799999999999995 5799999999976432 2469999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-CeEEeccCcccccCCCCCCCcCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM-EPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~-~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
|.+++.... .+++.+++.|+.||+.||+|||++|||||||||+|||++.++ .+||+|||+|+.+.......
T Consensus 137 L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~--- 208 (336)
T 4g3f_A 137 LGQLIKQMG-----CLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGK--- 208 (336)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC----------
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCccc---
Confidence 999998764 399999999999999999999999999999999999999987 59999999999775432110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
........+||+.|||||++.+..|+.++|||||||++|||+||+.||.+..
T Consensus 209 ----------------------------~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~Pf~~~~ 260 (336)
T 4g3f_A 209 ----------------------------SLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHPWTQYF 260 (336)
T ss_dssp ---------------------------------CCCCCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSSTTTC
T ss_pred ----------------------------ceecCCccccCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence 0112234679999999999999999999999999999999999999997653
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhc----cCCCCCCCCcCC
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALE----KIPSSPSPYLYG 790 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~----~i~~~~~p~~~~ 790 (791)
...... .+..... .....+...+..+.+++.+||+.||++|||+.|+++.|. ++.....||+-+
T Consensus 261 ~~~~~~---------~i~~~~~-~~~~~~~~~s~~~~~li~~~L~~dP~~R~sa~el~~~l~~~l~~~~~l~hPw~~~ 328 (336)
T 4g3f_A 261 RGPLCL---------KIASEPP-PIREIPPSCAPLTAQAIQEGLRKEPVHRASAMELRRKVGKALQEVGGLKSPWKGE 328 (336)
T ss_dssp CSCCHH---------HHHHSCC-GGGGSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHTTSSCSCSSSS
T ss_pred HHHHHH---------HHHcCCC-CchhcCccCCHHHHHHHHHHccCCHhHCcCHHHHHHHHHHHHhhhhhccCCCcCC
Confidence 322111 1111100 000112235567889999999999999999999988764 455667788754
No 8
>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*
Probab=100.00 E-value=1.8e-52 Score=447.48 Aligned_cols=244 Identities=23% Similarity=0.295 Sum_probs=198.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||+||+|+. .+|+.||||++... .....+.+.+|+++|++++|||||++++++.+++..|||||||+||
T Consensus 29 ~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~yiVmEy~~gg 108 (350)
T 4b9d_A 29 LQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGG 108 (350)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTC
T ss_pred eEEEecCCCeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEeCCCCC
Confidence 46899999999999995 57999999999654 3344578999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++...... .+++.+++.|+.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.+.....
T Consensus 109 ~L~~~i~~~~~~---~~~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~----- 180 (350)
T 4b9d_A 109 DLFKRINAQKGV---LFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVE----- 180 (350)
T ss_dssp BHHHHHHHTTTC---CCCHHHHHHHHHHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHH-----
T ss_pred cHHHHHHHcCCC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcc-----
Confidence 999999765432 379999999999999999999999999999999999999999999999999987542110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....+||+.|||||++.+..|+.++|||||||++|||+||+.||.+..
T Consensus 181 -------------------------------~~~~~~GT~~YmAPE~l~~~~y~~~~DiwSlGvilyemltG~~PF~~~~ 229 (350)
T 4b9d_A 181 -------------------------------LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229 (350)
T ss_dssp -------------------------------HHHHHHSCCTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred -------------------------------cccccCCCccccCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcC
Confidence 0123469999999999999999999999999999999999999996542
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
. .+++.....+.++ .....+.++.+|+.+||+.||++|||++|+++
T Consensus 230 ~-------------~~~~~~i~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 276 (350)
T 4b9d_A 230 M-------------KNLVLKIISGSFPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILE 276 (350)
T ss_dssp H-------------HHHHHHHHHTCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred H-------------HHHHHHHHcCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 1 1222222222221 12235677899999999999999999999986
No 9
>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}
Probab=100.00 E-value=1.1e-51 Score=451.53 Aligned_cols=245 Identities=21% Similarity=0.335 Sum_probs=205.7
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||+|+. .+|+.||||++........+.+.+|+++|++++|||||+++++|.+.+..|||||||+||+
T Consensus 155 ~~~~iG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~~~~~~~~iVmEy~~gG~ 234 (423)
T 4fie_A 155 NFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGA 234 (423)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred eeeEeccCcCcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEEEECCEEEEEEeCCCCCc
Confidence 346799999999999995 5799999999976655556778999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++... .+++.++..|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.+.....
T Consensus 235 L~~~i~~~------~l~e~~~~~~~~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~------ 302 (423)
T 4fie_A 235 LTDIVTHT------RMNEEQIAAVCLAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP------ 302 (423)
T ss_dssp HHHHHHHS------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCC------
T ss_pred HHHHHhcc------CCCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCc------
Confidence 99998653 299999999999999999999999999999999999999999999999999987643211
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
.....+||+.|||||++.+..|+.++|||||||++|||++|+.||.+...
T Consensus 303 ------------------------------~~~~~~GTp~YmAPEvl~~~~y~~~~DiWSlGvilyeml~G~~PF~~~~~ 352 (423)
T 4fie_A 303 ------------------------------RRKSLVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP 352 (423)
T ss_dssp ------------------------------CBCCCEECTTTCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred ------------------------------cccccccCcCcCCHHHHCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCcCH
Confidence 12346799999999999999999999999999999999999999965421
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
......+..............+..+.+|+.+||..||++|||+.|+++
T Consensus 353 ----------~~~~~~i~~~~~~~~~~~~~~s~~~~dli~~~L~~dP~~R~ta~ell~ 400 (423)
T 4fie_A 353 ----------LKAMKMIRDNLPPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLK 400 (423)
T ss_dssp ----------HHHHHHHHHSCCCCCSCTTSSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred ----------HHHHHHHHcCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 111111111122222222335678899999999999999999999987
No 10
>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.4e-51 Score=425.92 Aligned_cols=240 Identities=23% Similarity=0.302 Sum_probs=190.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||+||+|+. .+|+.||||++.+.. ....+.+.+|++++++++|||||++++++.+++..|+||||+ +
T Consensus 18 ~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~ivmEy~-~ 96 (275)
T 3hyh_A 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp EEEEEC---CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECC-C
T ss_pred EEEEecCcCeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEeCC-C
Confidence 46899999999999994 579999999996542 233467999999999999999999999999999999999999 6
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... ++++.+++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+|+......
T Consensus 97 g~L~~~l~~~~-----~l~e~~~~~~~~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~----- 166 (275)
T 3hyh_A 97 NELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGN----- 166 (275)
T ss_dssp EEHHHHHHHSC-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC------------
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCC-----
Confidence 89999987654 39999999999999999999999999999999999999999999999999998654211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....+||+.|||||++.+..| +.++||||+||++|||+||+.||.+
T Consensus 167 --------------------------------~~~~~~GT~~Y~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~ 214 (275)
T 3hyh_A 167 --------------------------------FLKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp ----------------------------------------CTTSCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred --------------------------------ccCCeeECcccCChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCC
Confidence 1224579999999999998776 5899999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.. ...+......+....+...+.++.+|+.+||+.||++|||++|+++
T Consensus 215 ~~-------------~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~s~~eil~ 262 (275)
T 3hyh_A 215 ES-------------IPVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SS-------------HHHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CC-------------HHHHHHHHHcCCCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHc
Confidence 31 1122222223333333335678899999999999999999999987
No 11
>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-50 Score=424.49 Aligned_cols=240 Identities=21% Similarity=0.312 Sum_probs=194.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEc----cCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG----VDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lv~e~ 552 (791)
.+.||+|+||+||+|+. .+++.||||++... .....+.|.+|+++|++++|||||+++++|.+ ++..|+||||
T Consensus 31 ~~~iG~G~fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~lvmEy 110 (290)
T 3fpq_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEEETTEEEEEEEEEC
T ss_pred eeEEecCcCcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeeccCCCcEEEEEEeC
Confidence 35799999999999995 56899999999653 33445779999999999999999999999875 3457999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CeecCCCCCCeEec-CCCCeEEeccCcccccCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK--HVHGNLKPRNVLLG-NDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~--ivHrDlkp~NILl~-~~~~~kL~DFGla~~~~~~ 629 (791)
|++|+|.+++.+.. .+++..++.|+.||+.||+|||+++ ||||||||+|||++ .++.+||+|||+|+.....
T Consensus 111 ~~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~ 185 (290)
T 3fpq_A 111 MTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCC
Confidence 99999999998764 3999999999999999999999988 99999999999998 4789999999999754311
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
.....+||+.|||||++.+ .|+.++|||||||++|||+||+
T Consensus 186 --------------------------------------~~~~~~GTp~YmAPE~~~~-~y~~~~DiwSlGvilyelltg~ 226 (290)
T 3fpq_A 186 --------------------------------------FAKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE 226 (290)
T ss_dssp --------------------------------------SBEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred --------------------------------------ccCCcccCccccCHHHcCC-CCCcHHHHHHHHHHHHHHHHCC
Confidence 1124579999999999875 6999999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCc--cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADF--EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.||.+... ...+......+.. ......+.++.+|+.+||+.||++|||++|+++
T Consensus 227 ~Pf~~~~~------------~~~~~~~i~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~s~~e~l~ 282 (290)
T 3fpq_A 227 YPYSECQN------------AAQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CTTTTCSS------------HHHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCCCc------------HHHHHHHHHcCCCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 99964311 0111111111111 111123457889999999999999999999986
No 12
>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*
Probab=100.00 E-value=3.4e-51 Score=430.59 Aligned_cols=243 Identities=20% Similarity=0.243 Sum_probs=196.3
Q ss_pred cceeccccCceEEEEEEe----CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVL----EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
..+.||+|+||+||+|+. .+++.||||+++... ......+.+|+++|++++|||||++++++.+++..|+||||
T Consensus 28 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~~~~~~~~ivmEy 107 (304)
T 3ubd_A 28 LLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDF 107 (304)
T ss_dssp EEEEEECGGGCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEEEETTEEEEEECC
T ss_pred EEEEEecCCCeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEEEc
Confidence 456899999999999985 247899999997542 22234688999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
|+||+|.+++.... .+++.+++.|+.||+.||+|||++|||||||||+|||++.++.+||+|||+|+......
T Consensus 108 ~~gg~L~~~l~~~~-----~l~e~~~~~~~~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~-- 180 (304)
T 3ubd_A 108 LRGGDLFTRLSKEV-----MFTEEDVKFYLAELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHE-- 180 (304)
T ss_dssp CTTCEEHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-------
T ss_pred CCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCC--
Confidence 99999999998764 39999999999999999999999999999999999999999999999999998653211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
......+||+.|||||++.+..|+.++||||+||++|||+||+.||
T Consensus 181 ----------------------------------~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilyemltG~~PF 226 (304)
T 3ubd_A 181 ----------------------------------KKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226 (304)
T ss_dssp ----------------------------------CCCCSCCCCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ----------------------------------ccccccccCcccCCHHHhccCCCCCCCcccchHHHHHHHHhCCCCC
Confidence 1123467999999999999999999999999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM-----KEALQ 775 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 775 (791)
.+.. ..++...........+...+.++.+|+.+||+.||++|||+ +|+++
T Consensus 227 ~~~~-------------~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~ta~~~~~~eil~ 281 (304)
T 3ubd_A 227 QGKD-------------RKETMTMILKAKLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKR 281 (304)
T ss_dssp CCSS-------------HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSTTTHHHHHT
T ss_pred CCcC-------------HHHHHHHHHcCCCCCCCcCCHHHHHHHHHHcccCHHHCCCCCcCCHHHHHc
Confidence 6532 12222333333333344466788999999999999999984 67764
No 13
>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1.9e-50 Score=428.91 Aligned_cols=264 Identities=20% Similarity=0.224 Sum_probs=198.8
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccC----ceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD----EKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~----~~~lv~e~~~~ 555 (791)
.+.||+|+||+||+|++ +|+.||||++...... ...++.|+..+.+++|||||++++++.+++ ..|||||||++
T Consensus 8 ~~~iG~G~fG~Vy~~~~-~g~~VAvK~l~~~~~~-~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~~~~~~~~lV~Ey~~~ 85 (303)
T 3hmm_A 8 QESIGKGRFGEVWRGKW-RGEEVAVKIFSSREER-SWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDYHEH 85 (303)
T ss_dssp EEEEEECSSSEEEEEEE-TTEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECCTT
T ss_pred EEEEeeCCCeEEEEEEE-CCEEEEEEEECccchh-hHHHHHHHHHHhcCCCCCCCcEEEEEEecCCCceEEEEEecCCCC
Confidence 46899999999999998 5899999999765332 233456677777899999999999998764 57999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CCeecCCCCCCeEecCCCCeEEeccCcccccC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK--------KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVT 627 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~--------~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~ 627 (791)
|+|.++++.. +++|+.+.+|+.|++.||+|||++ +||||||||+|||++.++.+||+|||+|+...
T Consensus 86 gsL~~~l~~~------~l~~~~~~~i~~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~ 159 (303)
T 3hmm_A 86 GSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHD 159 (303)
T ss_dssp CBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEE
T ss_pred CcHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCcccc
Confidence 9999999764 289999999999999999999986 99999999999999999999999999998765
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC------CCCCchhhHHHHHH
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI------KPNPKWDVYSFGVI 701 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~------~~~~~sDvwSlGvi 701 (791)
....... ......+||+.|||||++.+. .++.++|||||||+
T Consensus 160 ~~~~~~~--------------------------------~~~~~~~GT~~ymAPE~l~~~~~~~~~~~~~k~DVwS~Gvv 207 (303)
T 3hmm_A 160 SATDTID--------------------------------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLV 207 (303)
T ss_dssp TTTTEES--------------------------------CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCcee--------------------------------eecccccccccccCHHHhcccccccCCccChhHhhhhHHHH
Confidence 3322110 112245699999999999764 36789999999999
Q ss_pred HHHHHhCCcchhccccCCCC--cchh---chhHH-HHHHHHhhhcCccc---hHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 003847 702 LLELLTGKVIVVDELGQGNG--LLVE---DKNRA-IRLADAAIRADFEG---KEEALLSCFKLGYSCASPLPQKRPSMKE 772 (791)
Q Consensus 702 l~elltG~~pf~~~~~~~~~--~~~~---~~~~~-~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~~RPs~~e 772 (791)
+|||+||+.||......... .... ..... ..+.+...++..+. ..+....+.+|+.+||+.||++||||.|
T Consensus 208 l~El~tg~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~rp~~p~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~e 287 (303)
T 3hmm_A 208 FWEIARRCSIGGIHEDYQLPYYDLVPSDPSVEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGAARLTALR 287 (303)
T ss_dssp HHHHHHTBCBTTBCCCCCCTTTTTSCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGGGSCCHHH
T ss_pred HHHHHHCCCCCCccccccccchhcccccchHHHHHHHHhcccCCCCCCccccchHHHHHHHHHHHHHcccCHhHCcCHHH
Confidence 99999999887543221110 0000 00111 11122222222221 1235667899999999999999999999
Q ss_pred HHHHhccCCCC
Q 003847 773 ALQALEKIPSS 783 (791)
Q Consensus 773 vl~~L~~i~~~ 783 (791)
|++.|++|...
T Consensus 288 i~~~L~~l~~~ 298 (303)
T 3hmm_A 288 IKKTLSQLSQQ 298 (303)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHHH
Confidence 99999887543
No 14
>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*
Probab=100.00 E-value=3.9e-49 Score=416.73 Aligned_cols=261 Identities=23% Similarity=0.321 Sum_probs=189.6
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCc-----------
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE----------- 545 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----------- 545 (791)
..+.||+|+||+||+|+. .+|+.||||+++... ....+.+.+|+++|++++|||||+++++|.+.+.
T Consensus 9 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~ 88 (299)
T 4g31_A 9 PIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKV 88 (299)
T ss_dssp EEEEEEECC--EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CE
T ss_pred EeeEEecCCCeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCc
Confidence 346899999999999995 579999999996543 3345679999999999999999999999976543
Q ss_pred -eEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 546 -KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 546 -~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
.|+|||||++|+|.+++....... ..++..++.|+.||++||+|||++|||||||||+|||++.++.+||+|||+|+
T Consensus 89 ~l~ivmE~~~gg~L~~~l~~~~~~~--~~~~~~~~~i~~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~ 166 (299)
T 4g31_A 89 YLYIQMQLCRKENLKDWMNGRCTIE--ERERSVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVT 166 (299)
T ss_dssp EEEEEEECCCSCCHHHHHHTCCSGG--GSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-
T ss_pred EEEEEEecCCCCcHHHHHHhcCCCC--hhHHHHHHHHHHHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccce
Confidence 689999999999999998654322 25677889999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLE 704 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~e 704 (791)
.+............ .......+..+||+.|||||++.+..|+.++|||||||++||
T Consensus 167 ~~~~~~~~~~~~~~------------------------~~~~~~~~~~~GT~~YmAPE~~~~~~y~~~~DiwSlGvilye 222 (299)
T 4g31_A 167 AMDQDEEEQTVLTP------------------------MPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFE 222 (299)
T ss_dssp -------------------------------------------------CCCTTSCHHHHTTCCCCTHHHHHHHHHHHHH
T ss_pred ecCCCccccccccc------------------------cccccccCCcccCccccCHHHHcCCCCCCHHHHHHHHHHHHH
Confidence 87643322110000 001112345679999999999999999999999999999999
Q ss_pred HHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH--HhccC
Q 003847 705 LLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ--ALEKI 780 (791)
Q Consensus 705 lltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~--~L~~i 780 (791)
|++ ||.... .. ...........++ ........+.+|+.+||+.||++|||+.|+++ .++++
T Consensus 223 ll~---Pf~~~~-----------~~-~~~~~~~~~~~~p~~~~~~~~~~~~li~~~L~~dP~~Rps~~eil~h~~~~~~ 286 (299)
T 4g31_A 223 LLY---PFSTQM-----------ER-VRTLTDVRNLKFPPLFTQKYPCEYVMVQDMLSPSPMERPEAINIIENAVFEDL 286 (299)
T ss_dssp HHS---CCSSHH-----------HH-HHHHHHHHTTCCCHHHHHHCHHHHHHHHHHTCSSGGGSCCHHHHHTSGGGCCC
T ss_pred Hcc---CCCCcc-----------HH-HHHHHHHhcCCCCCCCcccCHHHHHHHHHHcCCChhHCcCHHHHhcCHhhCCC
Confidence 996 664321 01 1111111112222 22234456788999999999999999999987 45554
No 15
>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*
Probab=100.00 E-value=9.4e-50 Score=429.99 Aligned_cols=258 Identities=22% Similarity=0.287 Sum_probs=206.6
Q ss_pred cceeccccCceEEEEEEeC------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCC-CCccceeeEEEcc-CceEEE
Q 003847 479 SAYILGASGSSIMYKAVLE------DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVH-PNLVRIRGFYWGV-DEKLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~-~~~~lv 549 (791)
..+.||+|+||+||+|+.. .++.||||+++... ....+.|.+|+++|++++| ||||+++|+|.+. +..++|
T Consensus 68 l~~~LG~G~fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~~~~~~~iV 147 (353)
T 4ase_A 68 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 147 (353)
T ss_dssp EEEEEEECSSEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred EeeEEecCCCeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEecCCEEEEE
Confidence 4578999999999999843 24689999997653 3445789999999999965 8999999999765 568999
Q ss_pred EeccCCCChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEe
Q 003847 550 YDFVPNGSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~ 618 (791)
||||++|+|.++++..... ....+++.++..|+.|||+||+|||+++||||||||+|||+++++.+||+
T Consensus 148 ~Ey~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~ 227 (353)
T 4ase_A 148 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 227 (353)
T ss_dssp EECCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEcCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHHHHHHHHHHhHhhCCeecCccCccceeeCCCCCEEEC
Confidence 9999999999999864321 11348999999999999999999999999999999999999999999999
Q ss_pred ccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHH
Q 003847 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSF 698 (791)
Q Consensus 619 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSl 698 (791)
|||+|+.+..+.... .....+||+.|||||++.+..|+.++|||||
T Consensus 228 DFGlar~~~~~~~~~----------------------------------~~~~~~gt~~ymAPE~l~~~~y~~ksDVwS~ 273 (353)
T 4ase_A 228 DFGLARDIYKDPDYV----------------------------------RKGDARLPLKWMAPETIFDRVYTIQSDVWSF 273 (353)
T ss_dssp CCGGGSCTTTCTTSE----------------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred cchhhhhcccCCCce----------------------------------eeccccccccccCHHHHhcCCCCCcccEeeh
Confidence 999998765332111 1123458999999999999999999999999
Q ss_pred HHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 699 GVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 699 Gvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
||++|||+| |+.||.+.... ......+....+. +.+...+.++.+++.+||+.||++|||+.||++.|
T Consensus 274 Gv~l~El~t~G~~Pf~~~~~~---------~~~~~~i~~g~~~--~~p~~~~~~~~~li~~c~~~dP~~RPt~~eil~~L 342 (353)
T 4ase_A 274 GVLLWEIFSLGASPYPGVKID---------EEFCRRLKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342 (353)
T ss_dssp HHHHHHHTTTSCCSSTTCCCS---------HHHHHHHHHTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCCCCCHH---------HHHHHHHHcCCCC--CCCccCCHHHHHHHHHHcCcChhHCcCHHHHHHHH
Confidence 999999998 89999653211 1112222222111 22223567889999999999999999999999999
Q ss_pred ccCC
Q 003847 778 EKIP 781 (791)
Q Consensus 778 ~~i~ 781 (791)
+++.
T Consensus 343 ~~ll 346 (353)
T 4ase_A 343 GNLL 346 (353)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 16
>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}
Probab=100.00 E-value=1.9e-46 Score=411.27 Aligned_cols=259 Identities=20% Similarity=0.252 Sum_probs=195.0
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEc------cCceEEE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG------VDEKLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~~~~~lv 549 (791)
..+.||+|+||+||+|+. .+|+.||||+++.. .....+.+.+|+++|++++|||||++++++.. .+..|+|
T Consensus 58 ~~~~lG~G~fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~~~~~~~~~~~iv 137 (398)
T 4b99_A 58 IIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPTVPYGEFKSVYVV 137 (398)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSSCTTTCCCEEEE
T ss_pred EEEEEecccCeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecccccccCCEEEEE
Confidence 346899999999999995 57999999999754 23345678899999999999999999998764 3578999
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
||||+ |+|.+++.... ++++.+++.|+.||+.||+|||++|||||||||+|||++.++.+||+|||+|+.+...
T Consensus 138 mE~~~-g~L~~~i~~~~-----~l~~~~~~~~~~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~ 211 (398)
T 4b99_A 138 LDLME-SDLHQIIHSSQ-----PLTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTS 211 (398)
T ss_dssp EECCS-EEHHHHHTSSS-----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC---
T ss_pred EeCCC-CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccC
Confidence 99995 68999887643 4999999999999999999999999999999999999999999999999999876432
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG 708 (791)
... ........+||+.|||||++.+. .|+.++||||+||++|||++|
T Consensus 212 ~~~--------------------------------~~~~~~~~~GT~~Y~APEv~~~~~~~~~~~DiWSlG~il~ell~G 259 (398)
T 4b99_A 212 PAE--------------------------------HQYFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLAR 259 (398)
T ss_dssp ------------------------------------CCCCCSSCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHT
T ss_pred ccc--------------------------------cccccccceeChHhcCHHHhcCCCCCCChhheehhHHHHHHHHHC
Confidence 111 11123456899999999998875 569999999999999999999
Q ss_pred CcchhccccCCCCcchh------------c--hhHHHHHHHHhhhcCccch-----HHHHHHHHHHHhhccCCCCCCCCC
Q 003847 709 KVIVVDELGQGNGLLVE------------D--KNRAIRLADAAIRADFEGK-----EEALLSCFKLGYSCASPLPQKRPS 769 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~~~-----~~~~~~l~~li~~cl~~dP~~RPs 769 (791)
++||.+.........+. . ........ ..+....+.. .....++.+|+.+||..||++|||
T Consensus 260 ~~pF~g~~~~~~l~~I~~~~g~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL~~dP~~R~t 338 (398)
T 4b99_A 260 RQLFPGKNYVHQLQLIMMVLGTPSPAVIQAVGAERVRAYI-QSLPPRQPVPWETVYPGADRQALSLLGRMLRFEPSARIS 338 (398)
T ss_dssp SCSSCCSSHHHHHHHHHHHHCCCCGGGTC-----CHHHHH-HSSCCCCCCCHHHHSTTCCHHHHHHHHHHSCSSTTTSCC
T ss_pred CCCCCCCCHHHHHHHHHHhcCCCChHHhhhhhhhhhhhhh-hcCCCcCCCCHHHhCCCCCHHHHHHHHHHCcCChhHCcC
Confidence 99996542110000000 0 00000000 0000000000 012456889999999999999999
Q ss_pred HHHHHHH
Q 003847 770 MKEALQA 776 (791)
Q Consensus 770 ~~evl~~ 776 (791)
++|+++.
T Consensus 339 a~e~L~H 345 (398)
T 4b99_A 339 AAAALRH 345 (398)
T ss_dssp HHHHTTS
T ss_pred HHHHhcC
Confidence 9999873
No 17
>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*
Probab=100.00 E-value=1.4e-45 Score=400.12 Aligned_cols=218 Identities=17% Similarity=0.221 Sum_probs=166.1
Q ss_pred cceeccccCceEEEEEEeC----CCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAVLE----DGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
..+.||+|+||+||+|+.+ +++.||||++..... ..++.+|+++|+++ +|||||+++++|.+.+..|+|||||
T Consensus 25 i~~~lG~G~fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~--~~~~~~E~~~l~~~~~h~nIv~l~~~~~~~~~~~lvmE~~ 102 (361)
T 4f9c_A 25 IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSH--PIRIAAELQCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYL 102 (361)
T ss_dssp EEEEEEECSSEEEEEEEEEBTTSCEEEEEEEEECTTSC--HHHHHHHHHHHHHTCSBTTBCCCSEEEEETTEEEEEEECC
T ss_pred EEEEEecccCcEEEEEEEcccCCCCCEEEEEEEccccC--HHHHHHHHHHHHHhcCCCCCceEEEEEEECCEEEEEEeCC
Confidence 3568999999999999842 478999999876533 35688999999998 6999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC-CCeEEeccCcccccCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-MEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~-~~~kL~DFGla~~~~~~~~~ 632 (791)
++|+|.+++. .+++.+++.++.||+.||+|||++|||||||||+|||++.+ +.+||+|||+|+........
T Consensus 103 ~g~~L~~~~~--------~l~~~~~~~~~~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~ 174 (361)
T 4f9c_A 103 EHESFLDILN--------SLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIE 174 (361)
T ss_dssp CCCCHHHHHT--------TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCG
T ss_pred CcccHHHHHc--------CCCHHHHHHHHHHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccc
Confidence 9999999873 28999999999999999999999999999999999999876 79999999999876543221
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~p 711 (791)
........ .. ......................+||+.|||||++.+. .|+.++||||+||++|||++|+.|
T Consensus 175 ~~~~~~~~------~~--~~~~~~~~~~~~~~~~~~~~~~~GT~~Y~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~P 246 (361)
T 4f9c_A 175 LLKFVQSE------AQ--QERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYP 246 (361)
T ss_dssp GGGGC----------------------------------CCCCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSS
T ss_pred cccccccc------cc--ccccccccccccccccccccccccCccccCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCC
Confidence 11000000 00 0000000000001112234567899999999999775 589999999999999999999999
Q ss_pred hhc
Q 003847 712 VVD 714 (791)
Q Consensus 712 f~~ 714 (791)
|..
T Consensus 247 f~~ 249 (361)
T 4f9c_A 247 FYK 249 (361)
T ss_dssp SSC
T ss_pred CCC
Confidence 954
No 18
>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A
Probab=100.00 E-value=3e-45 Score=417.86 Aligned_cols=245 Identities=19% Similarity=0.216 Sum_probs=199.0
Q ss_pred hcceeccccCceEEEEEEe-CCCcEEEEEEcCCCc------hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEE
Q 003847 478 ASAYILGASGSSIMYKAVL-EDGTALAVRRIGENS------VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
....+||+|+||.||+|+. .+|+.||||++.+.. .........++.+++.++|||||+++++|.+.+..|+||
T Consensus 192 ~i~k~LG~G~fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f~~~~~lylVm 271 (689)
T 3v5w_A 192 SVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFIL 271 (689)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEEECSSEEEEEE
T ss_pred EEEEEEecccCeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEEEECCEEEEEE
Confidence 3457899999999999995 579999999996531 111222334567778889999999999999999999999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
|||+||+|.+++.... .+++..++.|+.||+.||+|||++|||||||||+|||++.+|.+||+|||+|+.+....
T Consensus 272 Ey~~GGdL~~~l~~~~-----~l~E~~a~~y~~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~ 346 (689)
T 3v5w_A 272 DLMNGGDLHYHLSQHG-----VFSEADMRFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK 346 (689)
T ss_dssp CCCCSCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCC
T ss_pred ecCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCC
Confidence 9999999999998764 39999999999999999999999999999999999999999999999999998764211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-CCCCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-SIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-~~~~~~~sDvwSlGvil~elltG~ 709 (791)
....+||+.|||||++. +..|+.++|||||||++|||++|+
T Consensus 347 --------------------------------------~~t~~GTp~YmAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~ 388 (689)
T 3v5w_A 347 --------------------------------------PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGH 388 (689)
T ss_dssp --------------------------------------CCSCCSCGGGCCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSS
T ss_pred --------------------------------------CCCccCCcCccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 22457999999999996 457999999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-----MKEALQ 775 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 775 (791)
.||.+..... ...+...........+...+.++.+|+.+||..||++|++ ++||++
T Consensus 389 ~PF~~~~~~~----------~~~i~~~i~~~~~~~p~~~S~~a~dLI~~lL~~dP~~Rl~~~~~ga~ei~~ 449 (689)
T 3v5w_A 389 SPFRQHKTKD----------KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 449 (689)
T ss_dssp CTTCGGGCCC----------HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCGGGCTTCSSSTHHHHTT
T ss_pred CCCCCCChHH----------HHHHHHhhcCCCCCCCccCCHHHHHHHHHHccCCHhHCCCCCCCCHHHHhc
Confidence 9997643211 1122222333333333345678899999999999999998 677765
No 19
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=100.00 E-value=1.8e-45 Score=423.34 Aligned_cols=247 Identities=20% Similarity=0.273 Sum_probs=204.1
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||+|+. .+|+.||||++........+.+.+|+++|++++|||||+++++|.+.+..|+|||||+||+
T Consensus 161 i~~~lG~G~fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~~~~~~~~iv~E~~~gg~ 240 (573)
T 3uto_A 161 IHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGE 240 (573)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEEeeccCeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeecCCCc
Confidence 456899999999999995 5799999999987666666789999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC--CCeEEeccCcccccCCCCCCCcC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND--MEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~--~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|.+++....+ .+++.+++.|+.||+.||+|||++||+||||||+|||++.+ +.+||+|||+|+.+.....
T Consensus 241 L~~~i~~~~~----~l~e~~~~~~~~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~---- 312 (573)
T 3uto_A 241 LFEKVADEHN----KMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS---- 312 (573)
T ss_dssp HHHHHTCTTS----CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSE----
T ss_pred HHHHHHHhCC----CCCHHHHHHHHHHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCc----
Confidence 9998865432 39999999999999999999999999999999999999854 8999999999997653211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
....+||+.|||||++.+..|+.++||||+||++|||++|+.||.+.
T Consensus 313 ---------------------------------~~~~~GT~~y~APEv~~~~~y~~~~DiWSlGvilyeml~G~~Pf~~~ 359 (573)
T 3uto_A 313 ---------------------------------VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGE 359 (573)
T ss_dssp ---------------------------------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred ---------------------------------eeeeEECccccCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCc
Confidence 12346999999999999999999999999999999999999999654
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... .....+...............+..+.+||.+||..||++|||+.|+++
T Consensus 360 ~~~---------~~~~~i~~~~~~~~~~~~~~~s~~~~dli~~~L~~dp~~R~t~~e~l~ 410 (573)
T 3uto_A 360 NDD---------ETLRNVKSCDWNMDDSAFSGISEDGKDFIRKLLLADPNTRMTIHQALE 410 (573)
T ss_dssp SHH---------HHHHHHHTTCCCCCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CHH---------HHHHHHHhCCCCCCcccccCCCHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 211 111111111111111111224567889999999999999999999987
No 20
>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*
Probab=100.00 E-value=6.4e-43 Score=371.46 Aligned_cols=244 Identities=23% Similarity=0.347 Sum_probs=203.2
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.+.||+|+||.||+|. ..+|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (297)
T 3fxz_A 25 FEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSL 104 (297)
T ss_dssp CEEEEEETTEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred eeeeccCCCeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEEEECCEEEEEEECCCCCCH
Confidence 4689999999999999 467999999999766555567889999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++.... +++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 105 ~~~~~~~~------~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------- 171 (297)
T 3fxz_A 105 TDVVTETC------MDEGQIAAVCRECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS------- 171 (297)
T ss_dssp HHHHHHSC------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTC-------
T ss_pred HHHHhhcC------CCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCccc-------
Confidence 99987642 89999999999999999999999999999999999999999999999999987643211
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 172 -----------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~- 221 (297)
T 3fxz_A 172 -----------------------------KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENP- 221 (297)
T ss_dssp -----------------------------CBCCCCSCGGGCCHHHHHCSCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH-
T ss_pred -----------------------------ccCCccCCcCccChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH-
Confidence 11234599999999999999999999999999999999999999965311
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
....... .................+.+++.+||+.||++|||++|+++
T Consensus 222 --------~~~~~~~-~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 269 (297)
T 3fxz_A 222 --------LRALYLI-ATNGTPELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQ 269 (297)
T ss_dssp --------HHHHHHH-HHHCSCCCSCGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred --------HHHHHHH-HhCCCCCCCCccccCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 0111111 11111122223335667889999999999999999999987
No 21
>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A
Probab=100.00 E-value=7.2e-43 Score=375.90 Aligned_cols=242 Identities=23% Similarity=0.339 Sum_probs=203.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+..|+||||+++|
T Consensus 20 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~e~~~~~ 99 (328)
T 3fe3_A 20 LKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYASGG 99 (328)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTTC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEECCCCC
Confidence 46899999999999995 68999999999654 3345577889999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++.++..++.|++.||+|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 100 ~L~~~l~~~~-----~l~~~~~~~~~~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~------ 168 (328)
T 3fe3_A 100 EVFDYLVAHG-----RMKEKEARSKFRQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGG------ 168 (328)
T ss_dssp BHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSC------
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCC------
Confidence 9999987764 39999999999999999999999999999999999999999999999999998654221
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCC-CchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPN-PKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~-~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....+||+.|+|||++.+..+. .++||||+||++|||++|+.||.+.
T Consensus 169 -------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 217 (328)
T 3fe3_A 169 -------------------------------KLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQ 217 (328)
T ss_dssp -------------------------------GGGTTSSSGGGCCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred -------------------------------ccccccCCcceeCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCC
Confidence 11234699999999999887775 7999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. ..++......+.+..+...+..+.+++.+||..||.+|||++|+++.
T Consensus 218 ~-------------~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~R~t~~eil~h 265 (328)
T 3fe3_A 218 N-------------LKELRERVLRGKYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIMKD 265 (328)
T ss_dssp S-------------HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHCCSSTTTSCCHHHHTTC
T ss_pred C-------------HHHHHHHHHhCCCCCCCCCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 1 12222233333333333355678899999999999999999999874
No 22
>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=370.68 Aligned_cols=266 Identities=24% Similarity=0.377 Sum_probs=210.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.+.||+|+||.||+|.. .+++.||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++++|
T Consensus 15 ~~~lG~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~~L 94 (310)
T 3s95_A 15 GEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTL 94 (310)
T ss_dssp EEEEECCSSEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCTTCBH
T ss_pred cceecCCCCEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEEecCCeeEEEEEecCCCcH
Confidence 56899999999999995 46899999999877777778899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++..... .+++.++..|+.|++.||+|||+.||+||||||+||+++.++.+||+|||+++..............
T Consensus 95 ~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~ 170 (310)
T 3s95_A 95 RGIIKSMDS----QYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRS 170 (310)
T ss_dssp HHHHHHCCT----TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC-----------
T ss_pred HHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceeccccccccccccc
Confidence 999987432 3999999999999999999999999999999999999999999999999999876543321110000
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
. ...........+||+.|+|||++.+..++.++||||||+++|||++|..||......
T Consensus 171 ~----------------------~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~~~~~~~~~ 228 (310)
T 3s95_A 171 L----------------------KKPDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEIIGRVNADPDYLPR 228 (310)
T ss_dssp -------------------------------CCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHTCCSSTTTSCB
T ss_pred c----------------------cccccccccccCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHhcCCCCCcchhhh
Confidence 0 000111222457999999999999999999999999999999999999988654332
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
....... .....+...... .+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 229 ~~~~~~~----~~~~~~~~~~~~------~~~~l~~li~~~l~~dP~~Rps~~~l~~~L~~l~ 281 (310)
T 3s95_A 229 TMDFGLN----VRGFLDRYCPPN------CPPSFFPITVRCCDLDPEKRPSFVKLEHWLETLR 281 (310)
T ss_dssp CTTSSBC----HHHHHHHTCCTT------CCTTHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHhhh----hhccccccCCCC------CCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 2211111 111222221111 3456788999999999999999999999998874
No 23
>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*
Probab=100.00 E-value=4.4e-43 Score=377.14 Aligned_cols=269 Identities=30% Similarity=0.472 Sum_probs=215.2
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
....||+|+||.||+|+..+++.||||++........+.+.+|++++++++||||+++++++...+..++||||+++|+|
T Consensus 43 ~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 122 (321)
T 2qkw_B 43 HKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNL 122 (321)
T ss_dssp CCCCSCBCSSSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEECCCTTCCEEEEECCTTCBT
T ss_pred ccceeecCCCeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEEcCCCCcH
Confidence 34689999999999999888999999999877666678899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++...... ...+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++........
T Consensus 123 ~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~------ 195 (321)
T 2qkw_B 123 KRHLYGSDLP-TMSMSWEQRLEICIGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQT------ 195 (321)
T ss_dssp GGGSSSSCCC-SCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCC------
T ss_pred HHHHhccCCC-ccccCHHHHHHHHHHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeeccccccccccccc------
Confidence 9988654321 224899999999999999999999999999999999999999999999999999865322110
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
.......||+.|+|||++.+..++.++||||||+++|||++|+.||......
T Consensus 196 ----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~p~~~~~~~ 247 (321)
T 2qkw_B 196 ----------------------------HLSTVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPR 247 (321)
T ss_dssp ----------------------------CCBCCCEEETTTCCHHHHHHCBCCTHHHHHHHHHHHHHHHHCCTTCSCSSSS
T ss_pred ----------------------------ccccccCCCccccCHHHhcCCCCCcccchHhHHHHHHHHHhCCCcccccCcH
Confidence 0112334899999999998889999999999999999999999999765443
Q ss_pred CCCcchhchhHH------HHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 719 GNGLLVEDKNRA------IRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 719 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
............ ....++.... ....+....+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~l~~~ 317 (321)
T 2qkw_B 248 EMVNLAEWAVESHNNGQLEQIVDPNLAD--KIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALRLQ 317 (321)
T ss_dssp SCCCHHHHTHHHHTTTCCCSSSSSSCTT--CSCHHHHHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHhhhccccccHHHhcChhhcc--ccCHHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhhcc
Confidence 222211110000 0000111111 123457788999999999999999999999999998765433
No 24
>3zgw_A Maternal embryonic leucine zipper kinase; transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=9.3e-43 Score=377.29 Aligned_cols=244 Identities=21% Similarity=0.316 Sum_probs=196.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 15 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~Ei~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~~gg~ 94 (347)
T 3zgw_A 15 HETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGE 94 (347)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEESSCC---CCHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTTCB
T ss_pred EEEEEcCCCeEEEEEEECCCCCEEEEEEEEccccchHHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEEEeCCCCCC
Confidence 46899999999999994 679999999986543 2334578999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++.... .+++.+++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||++........
T Consensus 95 L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~------ 163 (347)
T 3zgw_A 95 LFDYIISQD-----RLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKD------ 163 (347)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBC------------
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCccHHHEEEcCCCCEEEEeccCcccccCCCC------
Confidence 999987664 399999999999999999999999999999999999999999999999999876432211
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......+||+.|+|||++.+..+ +.++||||+||++|||++|+.||.+..
T Consensus 164 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~ 214 (347)
T 3zgw_A 164 -----------------------------YHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN 214 (347)
T ss_dssp -------------------------------------CGGGCCHHHHTTC---CCHHHHHHHHHHHHHHHHSSCSSCCSS
T ss_pred -----------------------------ccccccCCccCccCHHHHcCCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCC
Confidence 01223469999999999988775 899999999999999999999996531
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..........+.+..+......+.+++.+||+.||++|||++|+++.
T Consensus 215 -------------~~~~~~~i~~~~~~~p~~~s~~~~~li~~~L~~dP~~Rps~~eil~h 261 (347)
T 3zgw_A 215 -------------VMALYKKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNH 261 (347)
T ss_dssp -------------HHHHHHHHHHTCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHTC
T ss_pred -------------HHHHHHHHHcCCCCCCCCCCHHHHHHHHHHcccCHhHCcCHHHHhcC
Confidence 11222223333333333355678899999999999999999999874
No 25
>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*
Probab=100.00 E-value=1e-42 Score=371.93 Aligned_cols=256 Identities=29% Similarity=0.371 Sum_probs=199.9
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 40 ~i~~~lG~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 3p86_A 40 NIKEKIGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSR 118 (309)
T ss_dssp EEEEEEEECSSEEEEEEEE-TTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTCCEEEEECCTT
T ss_pred eeeeEeecCCCeEEEEEEE-CCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCceEEEEecCCC
Confidence 3457899999999999987 58999999997653 34456789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK--HVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~--ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
|+|.+++....... .+++..++.++.|++.||+|||+.| |+||||||+||+++.++.+||+|||+++.......
T Consensus 119 ~~L~~~l~~~~~~~--~~~~~~~~~i~~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~-- 194 (309)
T 3p86_A 119 GSLYRLLHKSGARE--QLDERRRLSMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL-- 194 (309)
T ss_dssp CBHHHHHHSTTHHH--HSCHHHHHHHHHHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC------------
T ss_pred CcHHHHHhhcCCCC--CCCHHHHHHHHHHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCcccccccc--
Confidence 99999987643211 2899999999999999999999999 99999999999999999999999999975432110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 195 ----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~Pf~ 240 (309)
T 3p86_A 195 ----------------------------------SSKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPWG 240 (309)
T ss_dssp -----------------------------------------CCTTSCHHHHTTCCCCTTHHHHHHHHHHHHHHHCCCTTT
T ss_pred ----------------------------------ccccCCCCccccChhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1123458999999999999999999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
.... . ........ .......+......+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 241 ~~~~---------~-~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~~L~~~~~~ 299 (309)
T 3p86_A 241 NLNP---------A-QVVAAVGF-KCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLLRPLIKS 299 (309)
T ss_dssp TSCH---------H-HHHHHHHH-SCCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHC-
T ss_pred CCCH---------H-HHHHHHHh-cCCCCCCCccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHh
Confidence 5311 0 11111100 1111122223556789999999999999999999999999887544
No 26
>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A
Probab=100.00 E-value=4.7e-42 Score=376.22 Aligned_cols=257 Identities=20% Similarity=0.319 Sum_probs=206.9
Q ss_pred cceeccccCceEEEEEEe--------CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEE
Q 003847 479 SAYILGASGSSIMYKAVL--------EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~--------~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 548 (791)
..+.||+|+||.||+|+. .++..||||+++.. .....+.+.+|+++++++ +||||+++++++...+..|+
T Consensus 85 ~~~~LG~G~fg~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~~l 164 (370)
T 2psq_A 85 LGKPLGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYV 164 (370)
T ss_dssp EEEEESCCSSSEEEEEEEETCSTTCTTCEEEEEEEECCTTCBHHHHHHHHHHHHHHHHSCCCTTBCCEEEEECSSSSCEE
T ss_pred eeeEEeeCCCeeEEEEEEecccCcCcCcceeEEEEEecCCcCHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEccCCCEEE
Confidence 457899999999999984 24568999999765 334457899999999999 89999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEE
Q 003847 549 IYDFVPNGSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKI 617 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL 617 (791)
||||+++|+|.+++...... ....+++.+++.++.||+.||+|||++||+||||||+|||++.++.+||
T Consensus 165 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl 244 (370)
T 2psq_A 165 IVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVMKI 244 (370)
T ss_dssp EEECCTTCBHHHHHHHTCCC-----------CCCCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEE
T ss_pred EEEcCCCCCHHHHHHhhCCccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeccccchhhEEECCCCCEEE
Confidence 99999999999999875421 1124899999999999999999999999999999999999999999999
Q ss_pred eccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHH
Q 003847 618 GDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYS 697 (791)
Q Consensus 618 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS 697 (791)
+|||+++......... ......||+.|+|||++.+..++.++||||
T Consensus 245 ~DFG~a~~~~~~~~~~----------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Dvws 290 (370)
T 2psq_A 245 ADFGLARDINNIDYYK----------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDVWS 290 (370)
T ss_dssp CCCSSCEETTCCCTTC----------------------------------TTTTTTSCGGGCCHHHHHTCCCCHHHHHHH
T ss_pred ccccCCcccCccccee----------------------------------cccCCCcccceECHhHhcCCCCCcHHHHHH
Confidence 9999998764322110 112234788999999999999999999999
Q ss_pred HHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 698 FGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 698 lGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|||++|||++ |+.||.+.... ............ ..+......+.+++.+||+.||++||++.|+++.
T Consensus 291 lG~il~ellt~g~~p~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dP~~Rpt~~ell~~ 358 (370)
T 2psq_A 291 FGVLMWEIFTLGGSPYPGIPVE----------ELFKLLKEGHRM--DKPANCTNELYMMMRDCWHAVPSQRPTFKQLVED 358 (370)
T ss_dssp HHHHHHHHHTTSCCSSTTCCGG----------GHHHHHHTTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCHH----------HHHHHHhcCCCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHH
Confidence 9999999999 99998653211 111111111111 1122245678999999999999999999999999
Q ss_pred hccCC
Q 003847 777 LEKIP 781 (791)
Q Consensus 777 L~~i~ 781 (791)
|++|.
T Consensus 359 L~~il 363 (370)
T 2psq_A 359 LDRIL 363 (370)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98763
No 27
>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...
Probab=100.00 E-value=4.2e-42 Score=370.98 Aligned_cols=243 Identities=20% Similarity=0.253 Sum_probs=202.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+. .+|+.||||++++. .....+.+.+|++++++++||||+++++++...+..|+||||+++
T Consensus 10 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~~~~~~~~lv~E~~~g 89 (337)
T 1o6l_A 10 LKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANG 89 (337)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 46899999999999995 46999999999754 223456788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++.......
T Consensus 90 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~---- 160 (337)
T 1o6l_A 90 GELFFHLSRER-----VFTEERARFYGAEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA---- 160 (337)
T ss_dssp CBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTC----
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCC----
Confidence 99999987654 389999999999999999999999999999999999999999999999999975322110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 161 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 208 (337)
T 1o6l_A 161 --------------------------------TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQ 208 (337)
T ss_dssp --------------------------------CBCCCEECGGGCCGGGGSSSCBCTTHHHHHHHHHHHHHHHSSCSSCCS
T ss_pred --------------------------------cccccccChhhCChhhhcCCCCCchhhcccchhHHHHHhcCCCCCCCC
Confidence 122456999999999999999999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 776 (791)
.. ..+...........+......+.+++.+||+.||++|| +++|+++.
T Consensus 209 ~~-------------~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~g~~~~~~~ei~~h 261 (337)
T 1o6l_A 209 DH-------------ERLFELILMEEIRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEH 261 (337)
T ss_dssp SH-------------HHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHTS
T ss_pred CH-------------HHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHHcC
Confidence 11 11222222222222333567789999999999999999 89999763
No 28
>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*
Probab=100.00 E-value=6.9e-42 Score=367.69 Aligned_cols=246 Identities=21% Similarity=0.299 Sum_probs=203.0
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||+|+.. +|+.||||++........+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 49 ~~~~lg~G~~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 128 (321)
T 2c30_A 49 SYVKIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGA 128 (321)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEECCCCSCB
T ss_pred ccEEeccCCCeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEecCCCCC
Confidence 3468999999999999965 799999999977655566789999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 129 L~~~l~~~------~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~------ 196 (321)
T 2c30_A 129 LTDIVSQV------RLNEEQIATVCEAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP------ 196 (321)
T ss_dssp HHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSC------
T ss_pred HHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCcc------
Confidence 99987643 389999999999999999999999999999999999999999999999999987643211
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
......||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 197 ------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~pf~~~~~ 246 (321)
T 2c30_A 197 ------------------------------KRKSLVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPPYFSDSP 246 (321)
T ss_dssp ------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred ------------------------------ccccccCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH
Confidence 11234599999999999999999999999999999999999999965321
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. .....+ ..............+..+.+++.+||+.||++|||+.|+++.
T Consensus 247 ~---------~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~h 295 (321)
T 2c30_A 247 V---------QAMKRL-RDSPPPKLKNSHKVSPVLRDFLERMLVRDPQERATAQELLDH 295 (321)
T ss_dssp H---------HHHHHH-HHSSCCCCTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHHTS
T ss_pred H---------HHHHHH-hcCCCCCcCccccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 0 011111 111111111222245678899999999999999999999874
No 29
>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=1.3e-42 Score=363.52 Aligned_cols=255 Identities=24% Similarity=0.399 Sum_probs=207.8
Q ss_pred hhcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 477 KASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
+...+.||+|+||.||+|+..+++.||||++...... .+++.+|++++++++||||+++++++.+.+..++||||++++
T Consensus 12 y~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 90 (269)
T 4hcu_A 12 LTFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 90 (269)
T ss_dssp EEEEEEEEECSSCEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEECCTTC
T ss_pred ceeeheecCCCccEEEEEEecCCCeEEEEEecccccC-HHHHHHHHHHHHhCCCCCEeeEEEEEecCCceEEEEEeCCCC
Confidence 3345789999999999999888999999999865433 367999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++..... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++........
T Consensus 91 ~L~~~l~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---- 162 (269)
T 4hcu_A 91 CLSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT---- 162 (269)
T ss_dssp BHHHHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHH----
T ss_pred cHHHHHHhcCc----ccCHHHHHHHHHHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccc----
Confidence 99999876543 4899999999999999999999999999999999999999999999999999865432110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~ 715 (791)
......||+.|+|||++.+..++.++||||||+++|||++ |+.||...
T Consensus 163 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~~g~~p~~~~ 211 (269)
T 4hcu_A 163 -------------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENR 211 (269)
T ss_dssp -------------------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred -------------------------------cccCcccccccCCHHHhcCCCCCchhhhHHHHHHHHHHhcCCCCCCCCC
Confidence 0112337788999999998899999999999999999999 89998653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
... .....+ ..... ...+......+.+++.+||+.||++||++.|+++.|+++..+
T Consensus 212 ~~~---------~~~~~~-~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~l~~~ 267 (269)
T 4hcu_A 212 SNS---------EVVEDI-STGFR--LYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267 (269)
T ss_dssp CHH---------HHHHHH-HTTCC--CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHC
T ss_pred CHH---------HHHHHH-hcCcc--CCCCCcCCHHHHHHHHHHccCCcccCcCHHHHHHHHHHHHHc
Confidence 111 111111 11111 111222456788999999999999999999999999987543
No 30
>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}
Probab=100.00 E-value=2.2e-42 Score=372.14 Aligned_cols=257 Identities=22% Similarity=0.373 Sum_probs=205.7
Q ss_pred cceeccccCceEEEEEEeC----CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAVLE----DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
..+.||+|+||.||+|+.. .+..||||+++.. .....+.+.+|++++++++||||+++++++.+.+..++||||+
T Consensus 53 i~~~lG~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 132 (325)
T 3kul_A 53 IEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYM 132 (325)
T ss_dssp EEEEEEETTTEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECGGGCCEEEEECC
T ss_pred EeeEEEeCCCcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCccEEEeeCC
Confidence 4578999999999999963 4556999999765 3444578999999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++..... .+++..+..|+.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.........
T Consensus 133 ~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~ 208 (325)
T 3kul_A 133 ENGSLDTFLRTHDG----QFTIMQLVGMLRGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAA 208 (325)
T ss_dssp TTCBHHHHHHTTTT----CSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CC
T ss_pred CCCcHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccce
Confidence 99999999875532 39999999999999999999999999999999999999999999999999998765432111
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
. ......+|+.|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 209 ~---------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~ 255 (325)
T 3kul_A 209 Y---------------------------------TTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPY 255 (325)
T ss_dssp E---------------------------------ECC---CCGGGSCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred e---------------------------------eccCCCCcccccCHhHhcCCCCCcHHHHHHHHHHHHHHHcCCCCCc
Confidence 0 0112236788999999998899999999999999999999 99998
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
...... .......... ..+.....+..+.+++.+||..||++|||+.|+++.|+.+...+
T Consensus 256 ~~~~~~----------~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~eil~~L~~l~~~~ 315 (325)
T 3kul_A 256 WNMTNR----------DVISSVEEGY--RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDALIRSP 315 (325)
T ss_dssp TTSCHH----------HHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHSC
T ss_pred ccCCHH----------HHHHHHHcCC--CCCCCCCcCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHhCc
Confidence 553111 1111111111 11222235567899999999999999999999999999875443
No 31
>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*
Probab=100.00 E-value=1.9e-42 Score=372.29 Aligned_cols=262 Identities=22% Similarity=0.263 Sum_probs=203.8
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCc----eEEEEecc
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE----KLIIYDFV 553 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----~~lv~e~~ 553 (791)
...+.||+|+||.||+|+.. ++.||||++...... ...+++|+.++++++||||+++++++..... .++||||+
T Consensus 27 ~~~~~lg~G~~g~Vy~~~~~-~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~lv~e~~ 104 (322)
T 3soc_A 27 QLLEVKARGRFGCVWKAQLL-NEYVAVKIFPIQDKQ-SWQNEYEVYSLPGMKHENILQFIGAEKRGTSVDVDLWLITAFH 104 (322)
T ss_dssp EEEEEEECSTTCEEEEEEET-TEEEEEEEECGGGHH-HHHHHHHHHTSTTCCCTTBCCEEEEEEEECSSSEEEEEEEECC
T ss_pred hhhheecccCceEEEEEEEC-CCEEEEEEeecCchH-HHHHHHHHHHHhcCCCCCchhhcceeccCCCCCceEEEEEecC
Confidence 34578999999999999875 799999999765433 3456779999999999999999999987653 69999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC----------CCeecCCCCCCeEecCCCCeEEeccCcc
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK----------KHVHGNLKPRNVLLGNDMEPKIGDFGLE 623 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~----------~ivHrDlkp~NILl~~~~~~kL~DFGla 623 (791)
++|+|.+++... .+++..++.|+.|++.||+|||+. ||+||||||+|||++.++.+||+|||++
T Consensus 105 ~~g~L~~~l~~~------~~~~~~~~~i~~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a 178 (322)
T 3soc_A 105 EKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLA 178 (322)
T ss_dssp TTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTC
T ss_pred CCCCHHHHHHhc------CCCHHHHHHHHHHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcc
Confidence 999999999764 289999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-----CCCCCchhhHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-----IKPNPKWDVYSF 698 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~~sDvwSl 698 (791)
+........ .......||+.|+|||++.+ ..++.++|||||
T Consensus 179 ~~~~~~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~Diwsl 224 (322)
T 3soc_A 179 LKFEAGKSA----------------------------------GDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAM 224 (322)
T ss_dssp EEECTTSCC----------------------------------CCCTTCCCCGGGCCHHHHTTCCCCCHHHHHHHHHHHH
T ss_pred cccccccCc----------------------------------cccccCccCccccCHhhcccccccCcCCCccchhHHH
Confidence 876532211 01223469999999999986 345678899999
Q ss_pred HHHHHHHHhCCcchhccccCCCCcchhc---hhHHHHHHHHhh----hcCcc---chHHHHHHHHHHHhhccCCCCCCCC
Q 003847 699 GVILLELLTGKVIVVDELGQGNGLLVED---KNRAIRLADAAI----RADFE---GKEEALLSCFKLGYSCASPLPQKRP 768 (791)
Q Consensus 699 Gvil~elltG~~pf~~~~~~~~~~~~~~---~~~~~~~~~~~~----~~~~~---~~~~~~~~l~~li~~cl~~dP~~RP 768 (791)
||++|||+||+.||.............. ......+.+... ..... ........+.+|+.+||+.||++||
T Consensus 225 G~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rp 304 (322)
T 3soc_A 225 GLVLWELASRCTAADGPVDEYMLPFEEEIGQHPSLEDMQEVVVHKKKRPVLRDYWQKHAGMAMLCETIEECWDHDAEARL 304 (322)
T ss_dssp HHHHHHHHTTBTTSSSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHHHTCSSGGGSC
T ss_pred HHHHHHHHhCCCCCCCCcchhccchhhhhccCCchhhhhhhhhcccCCCCccccccccchHHHHHHHHHHHccCChhhCc
Confidence 9999999999999976544322221110 001111111111 11111 1123556799999999999999999
Q ss_pred CHHHHHHHhccCC
Q 003847 769 SMKEALQALEKIP 781 (791)
Q Consensus 769 s~~evl~~L~~i~ 781 (791)
|+.|+++.|++|.
T Consensus 305 s~~ell~~L~~l~ 317 (322)
T 3soc_A 305 SAGCVGERITQMQ 317 (322)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999998864
No 32
>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*
Probab=100.00 E-value=1.6e-41 Score=369.86 Aligned_cols=242 Identities=23% Similarity=0.307 Sum_probs=200.2
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchh------hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVD------RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
..+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 16 ~~~~LG~G~fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~e 95 (361)
T 2yab_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVYENRTDVVLILE 95 (361)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred EeeEEeeCcCEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEEEeCCEEEEEEE
Confidence 356899999999999995 46899999999654321 24679999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC----CeEEeccCcccccC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM----EPKIGDFGLERLVT 627 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~----~~kL~DFGla~~~~ 627 (791)
|+++|+|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++ .+||+|||+++.+.
T Consensus 96 ~~~gg~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~ 170 (361)
T 2yab_A 96 LVSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (361)
T ss_dssp CCCSCBHHHHHTTCS-----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECC
T ss_pred cCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcC
Confidence 999999999986543 399999999999999999999999999999999999998776 79999999998764
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt 707 (791)
... .....+||+.|+|||++.+..++.++|||||||++|+|++
T Consensus 171 ~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~~ll~ 213 (361)
T 2yab_A 171 DGV-------------------------------------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213 (361)
T ss_dssp TTC-------------------------------------CCCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred CCC-------------------------------------ccccCCCCccEECchHHcCCCCCccccHHHHHHHHHHHHh
Confidence 321 1123469999999999999899999999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchH----HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKE----EALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
|+.||.+... .+.........+.... ..+..+.+|+.+||..||++|||+.|+++
T Consensus 214 g~~Pf~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~e~l~ 272 (361)
T 2yab_A 214 GASPFLGDTK-------------QETLANITAVSYDFDEEFFSQTSELAKDFIRKLLVKETRKRLTIQEALR 272 (361)
T ss_dssp SCCSSCCSSH-------------HHHHHHHHTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred CCCCCCCCCH-------------HHHHHHHHhcCCCCCchhccCCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 9999965321 1112222222222211 23467889999999999999999999985
No 33
>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*
Probab=100.00 E-value=6.1e-42 Score=358.21 Aligned_cols=254 Identities=25% Similarity=0.384 Sum_probs=207.4
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.....||+|+||.||+|...++..||||++...... .+++.+|++++++++||||+++++++...+..++||||+++++
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (268)
T 3sxs_A 11 TLLKELGSGQFGVVKLGKWKGQYDVAVKMIKEGSMS-EDEFFQEAQTMMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGC 89 (268)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECBTTBC-HHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTTCB
T ss_pred eeeeeeccCCCceEEEEEecCceeEEEEEeccCCCc-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCceEEEEEccCCCc
Confidence 345789999999999999988889999999765433 3678999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++..........
T Consensus 90 L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~---- 161 (268)
T 3sxs_A 90 LLNYLRSHGK----GLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVS---- 161 (268)
T ss_dssp HHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEE----
T ss_pred HHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhc----
Confidence 9999977542 38999999999999999999999999999999999999999999999999998764322110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~ 716 (791)
.....||+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 162 -------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (268)
T 3sxs_A 162 -------------------------------SVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYT 210 (268)
T ss_dssp -------------------------------CCSCCCCGGGCCHHHHHHSEEETTHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred -------------------------------ccCCCcCcccCCHHHHhccCCchhhhhHHHHHHHHHHHcCCCCCccccC
Confidence 112236788999999998889999999999999999999 999985431
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
.. .....+.. . .....+...+..+.+++.+||+.||++|||+.|+++.|+.+...
T Consensus 211 ~~---------~~~~~~~~-~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~~ 265 (268)
T 3sxs_A 211 NS---------EVVLKVSQ-G--HRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLSSIEPLREK 265 (268)
T ss_dssp HH---------HHHHHHHT-T--CCCCCCTTSCHHHHHHHHHTTCSSGGGSCCHHHHHHHHGGGCC-
T ss_pred hH---------HHHHHHHc-C--CCCCCCCcChHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhhc
Confidence 11 11111111 1 01111122356788999999999999999999999999998754
No 34
>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...
Probab=100.00 E-value=3.3e-42 Score=365.59 Aligned_cols=267 Identities=22% Similarity=0.342 Sum_probs=204.5
Q ss_pred cceeccccCceEEEEEEe-----CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVL-----EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e 551 (791)
..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++... ...++|||
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e 93 (295)
T 3ugc_A 14 FLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIME 93 (295)
T ss_dssp EEEEEEECSSEEEEEEEECTTCSSCCEEEEEEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECHHHHTSCEEEEE
T ss_pred hhheeeccCCEEEEEEEEecccCCCCcEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCceEEEEE
Confidence 356899999999999984 36899999999887777778899999999999999999999998654 45899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++|+|.+++..... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 94 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 169 (295)
T 3ugc_A 94 YLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKE 169 (295)
T ss_dssp CCTTCBHHHHHHHCGG----GCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------
T ss_pred eCCCCCHHHHHHhccc----ccCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcc
Confidence 9999999999977543 389999999999999999999999999999999999999999999999999987653321
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~p 711 (791)
... ......|+..|+|||++.+..++.++||||||+++|||+||..|
T Consensus 170 ~~~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~~ 216 (295)
T 3ugc_A 170 FFK---------------------------------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEK 216 (295)
T ss_dssp ---------------------------------------CTTCGGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHHTTCT
T ss_pred eee---------------------------------eccCCCCccceeCcHHhcCCCCChHHHHHHHHHHHHHHHhcccc
Confidence 100 11123477889999999999999999999999999999999988
Q ss_pred hhccccCCCC---cchhchhHHHHHHHHhhh-cCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 712 VVDELGQGNG---LLVEDKNRAIRLADAAIR-ADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 712 f~~~~~~~~~---~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
|......... .............+.... ...+.+...+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~el~~~L~~l~~ 291 (295)
T 3ugc_A 217 SKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIRD 291 (295)
T ss_dssp TCSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHHH
T ss_pred cCCChHHHHhhhcCccccchhHHHHHHHHhccCcCCCCcCcCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHH
Confidence 7542111000 000000001111111111 1112223355788999999999999999999999999988753
No 35
>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}
Probab=100.00 E-value=4.6e-42 Score=373.15 Aligned_cols=242 Identities=23% Similarity=0.269 Sum_probs=198.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+||+|+||.||+|+. .+|+.||||+++.. .....+.+.+|.++++.+ +||||+++++++.+.+..|+||||++
T Consensus 28 ~~~lG~G~fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 107 (353)
T 3txo_A 28 IRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVN 107 (353)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEEEeCCEEEEEEeCCC
Confidence 46899999999999995 46899999999754 223346688899999988 79999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 108 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~---- 178 (353)
T 3txo_A 108 GGDLMFHIQKSR-----RFDEARARFYAAEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG---- 178 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC------
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCC----
Confidence 999999988764 39999999999999999999999999999999999999999999999999997532111
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 179 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 226 (353)
T 3txo_A 179 --------------------------------VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEA 226 (353)
T ss_dssp ---------------------------------------CCGGGCCHHHHHHHHCTTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred --------------------------------ccccccCCCcCeEChhhcCCCCcCCccCCCcchHHHHHHHhCCCCCCC
Confidence 112345699999999999998999999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM------KEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 775 (791)
... .++...........+......+.+++.+||+.||++||++ +|+++
T Consensus 227 ~~~-------------~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dP~~R~~~~~~~~~~~il~ 280 (353)
T 3txo_A 227 ENE-------------DDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHAILR 280 (353)
T ss_dssp SSH-------------HHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSGGGTCTHHHHT
T ss_pred CCH-------------HHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhhCHHHccCCcccCCHHHHhh
Confidence 421 1222333333333333355678899999999999999998 77765
No 36
>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...
Probab=100.00 E-value=6.8e-42 Score=375.27 Aligned_cols=256 Identities=21% Similarity=0.378 Sum_probs=196.0
Q ss_pred hhcceeccccCceEEEEEEeC----CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 477 KASAYILGASGSSIMYKAVLE----DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
+...+.||+|+||.||+|+.. ++..||||+++.. .....+.+.+|++++++++||||+++++++...+..++|||
T Consensus 47 ~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 126 (373)
T 2qol_A 47 ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTE 126 (373)
T ss_dssp CCCCEEEEECSSSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred ceeeeEEeeCCCeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCceEEEEe
Confidence 344679999999999999854 5788999999765 33445689999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++|+|.+++..... .+++.++..|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 127 ~~~~~sL~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~ 202 (373)
T 2qol_A 127 YMENGSLDSFLRKHDA----QFTVIQLVGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPE 202 (373)
T ss_dssp CCTTCBHHHHHHTTTT----CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------
T ss_pred CCCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCc
Confidence 9999999999976532 489999999999999999999999999999999999999999999999999987653221
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~ 710 (791)
... ......+|+.|+|||++.+..++.++|||||||++|||++ |+.
T Consensus 203 ~~~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~SlG~il~ellt~g~~ 249 (373)
T 2qol_A 203 AAY---------------------------------TTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249 (373)
T ss_dssp --------------------------------------------CTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTC-C
T ss_pred cce---------------------------------eccCCCcCCCccChhhhccCCcCchhcHHHHHHHHHHHHhCCCC
Confidence 100 0111235778999999999999999999999999999998 999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
||..... ............. +.....+..+.+++.+||+.||++||++.||++.|+++.
T Consensus 250 P~~~~~~----------~~~~~~i~~~~~~--~~~~~~~~~l~~li~~cl~~dp~~RPs~~~i~~~L~~~~ 308 (373)
T 2qol_A 250 PYWEMSN----------QDVIKAVDEGYRL--PPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLI 308 (373)
T ss_dssp TTTTCCH----------HHHHHHHHTTEEC--CCCTTCBHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCH----------HHHHHHHHcCCCC--CCCccccHHHHHHHHHHhCcChhhCcCHHHHHHHHHHHH
Confidence 9854311 1112222211111 112234567899999999999999999999999998764
No 37
>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*
Probab=100.00 E-value=7.1e-42 Score=368.53 Aligned_cols=266 Identities=34% Similarity=0.546 Sum_probs=209.1
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchh-hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVD-RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~-~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||+|+..+|+.||||++...... ....+.+|++++++++||||+++++++...+..++||||+++|+
T Consensus 34 ~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 113 (326)
T 3uim_A 34 NKNILGRGGFGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGS 113 (326)
T ss_dssp STTEEECCSSSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEECCSSCCEEEEECCTTCB
T ss_pred cceeEecCCCcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEEecCCceEEEEEeccCCC
Confidence 34789999999999999888999999999765322 23468999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC---CCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK---KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~---~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
|.+++....... ..+++..+..|+.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++........
T Consensus 114 L~~~l~~~~~~~-~~~~~~~~~~i~~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~-- 190 (326)
T 3uim_A 114 VASCLRERPESQ-PPLDWPKRQRIALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTH-- 190 (326)
T ss_dssp HHHHHHCCSTTC-CCCCHHHHHHHHHHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSC--
T ss_pred HHHHHHhccccC-CCCCHHHHHHHHHHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCccccc--
Confidence 999998754322 3599999999999999999999999 9999999999999999999999999999876432211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 191 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 237 (326)
T 3uim_A 191 ---------------------------------VTTAVRGTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDL 237 (326)
T ss_dssp ---------------------------------EECCCCSCGGGCCHHHHHHSEECHHHHHHHHHHHHHHHHHCCCSBCH
T ss_pred ---------------------------------ccccccCCcCccCHHHhccCCCCccccchhHHHHHHHHHhCCCcccc
Confidence 11234589999999999888899999999999999999999999953
Q ss_pred cccCCCCcchh-c-------hhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 715 ELGQGNGLLVE-D-------KNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 715 ~~~~~~~~~~~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
........... + ........+..... .........+.+++.+||+.||++|||+.||++.|++...
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~Rps~~ell~~L~~~~~ 311 (326)
T 3uim_A 238 ARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQG--NYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGL 311 (326)
T ss_dssp HHHTTTSCSBHHHHHTTTTSSCCSTTSSCTTCTT--SCCHHHHHHHHHHHHHHTCSCGGGSCCHHHHHHHHHTSSC
T ss_pred cccccccchhHHHHHHHHhhchhhhhhcChhhcc--ccCHHHHHHHHHHHHHHhCcCCccCCCHHHHHHHhcCcch
Confidence 21110000000 0 00001111111111 2234577889999999999999999999999999987543
No 38
>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}
Probab=100.00 E-value=1.4e-41 Score=360.62 Aligned_cols=252 Identities=20% Similarity=0.300 Sum_probs=202.5
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 95 (294)
T 4eqm_A 16 VDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EEEEccCCCEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEeeeeCCeEEEEEeCCCC
Confidence 46899999999999994 56899999998542 334457899999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... ++++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++........
T Consensus 96 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~--- 167 (294)
T 4eqm_A 96 PTLSEYIESHG-----PLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLT--- 167 (294)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC---------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCcccccccccc---
Confidence 99999998764 3899999999999999999999999999999999999999999999999999865422110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 168 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~pf~~~ 215 (294)
T 4eqm_A 168 --------------------------------QTNHVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215 (294)
T ss_dssp ---------------------------------------CCSSCCHHHHHTCCCCTTHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred --------------------------------ccCccccCccccCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCC
Confidence 112345899999999999999999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccc-----hHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHhccCCCCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEG-----KEEALLSCFKLGYSCASPLPQKRP-SMKEALQALEKIPSSP 784 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~~ 784 (791)
... ...........+. ....+..+.+++.+||+.||++|| +++++.+.|+.+....
T Consensus 216 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~R~~~~~~l~~~l~~~~~~~ 277 (294)
T 4eqm_A 216 TAV-------------SIAIKHIQDSVPNVTTDVRKDIPQSLSNVILRATEKDKANRYKTIQEMKDDLSSVLHEN 277 (294)
T ss_dssp CHH-------------HHHHHHHSSCCCCHHHHSCTTSCHHHHHHHHHHSCSSGGGSCSSHHHHHHHHHTSSSSS
T ss_pred ChH-------------HHHHHHhhccCCCcchhcccCCCHHHHHHHHHHhcCCHhHccccHHHHHHHHHHHHhhc
Confidence 210 0000111111110 112346788999999999999998 9999999999886544
No 39
>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=372.17 Aligned_cols=246 Identities=21% Similarity=0.231 Sum_probs=197.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.++||+|+||.||+|+. .+|+.||||+++.......+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 94 ~~~lG~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~E~~~~~~L 173 (373)
T 2x4f_A 94 TEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGEL 173 (373)
T ss_dssp EEECC-----CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCTTCEE
T ss_pred ceEEecCcCEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCCCCcH
Confidence 46899999999999995 57999999999877666678899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe--cCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL--GNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl--~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
.+++..... .+++..++.++.||+.||+|||+.||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 174 ~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~----- 244 (373)
T 2x4f_A 174 FDRIIDESY----NLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREK----- 244 (373)
T ss_dssp HHHHHHTGG----GCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCB-----
T ss_pred HHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccc-----
Confidence 998875432 38999999999999999999999999999999999999 5678899999999987643211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 245 --------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~ 292 (373)
T 2x4f_A 245 --------------------------------LKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDN 292 (373)
T ss_dssp --------------------------------CCCCCSSCTTCCHHHHTTCBCCHHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred --------------------------------cccccCCCcEeChhhccCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCC
Confidence 112359999999999998899999999999999999999999996532
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
. ......+..................+.+|+.+||+.||++|||+.|+++
T Consensus 293 ~---------~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rps~~e~l~ 342 (373)
T 2x4f_A 293 D---------AETLNNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALK 342 (373)
T ss_dssp H---------HHHHHHHHHTCCCSCSGGGTTSCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred H---------HHHHHHHHhccCCCChhhhccCCHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 1 1111222211111111111224567899999999999999999999987
No 40
>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B
Probab=100.00 E-value=2.3e-41 Score=369.44 Aligned_cols=248 Identities=25% Similarity=0.322 Sum_probs=199.8
Q ss_pred hcceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 478 ASAYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
...+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++.+.+..|+||||++
T Consensus 32 ~~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~e~~~ 111 (362)
T 2bdw_A 32 DVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVT 111 (362)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEeeEEecCCCeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCC
Confidence 3457899999999999995 46899999999654 33445778999999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC---CCeEEeccCcccccCCCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND---MEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~---~~~kL~DFGla~~~~~~~~ 631 (791)
+|+|.+++.... .+++.++..++.||+.||+|||+.||+||||||+|||++.+ +.+||+|||++.......
T Consensus 112 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~- 185 (362)
T 2bdw_A 112 GGELFEDIVARE-----FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSE- 185 (362)
T ss_dssp SCBHHHHHTTCS-----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCC-
T ss_pred CCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCc-
Confidence 999999887543 38999999999999999999999999999999999999865 459999999998654221
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 186 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~P 229 (362)
T 2bdw_A 186 ------------------------------------AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPP 229 (362)
T ss_dssp ------------------------------------SCCCSCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred ------------------------------------ccccCCCCccccCHHHHccCCCCchhhHHHHHHHHHHHHHCCCC
Confidence 11234599999999999998999999999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|.+... ......+...............+..+.+|+.+||+.||++||++.|+++.
T Consensus 230 f~~~~~---------~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~h 285 (362)
T 2bdw_A 230 FWDEDQ---------HRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 285 (362)
T ss_dssp SCCSSH---------HHHHHHHHHTCCCCCTTGGGGSCHHHHHHHHHHSCSSGGGSCCHHHHTTS
T ss_pred CCCCCH---------HHHHHHHHhCCCCCCcccccCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 965321 01111111111110111112245678899999999999999999999864
No 41
>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}
Probab=100.00 E-value=2.8e-41 Score=377.60 Aligned_cols=244 Identities=25% Similarity=0.306 Sum_probs=199.4
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
..+.||+|+||.||+|.. .+|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..|+||||+++
T Consensus 15 i~~~LG~G~fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~lv~E~~~g 94 (444)
T 3soa_A 15 LFEELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTG 94 (444)
T ss_dssp EEEEEEEC--CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEEECSSEEEEEECCCBC
T ss_pred EEEEeccCCCeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEEEECCEEEEEEEeCCC
Confidence 357899999999999984 579999999996543 33456789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec---CCCCeEEeccCcccccCCCCCC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG---NDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~---~~~~~kL~DFGla~~~~~~~~~ 632 (791)
|+|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++ .++.+||+|||+++.......
T Consensus 95 g~L~~~i~~~~-----~~~e~~~~~i~~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~- 168 (444)
T 3soa_A 95 GELFEDIVARE-----YYSEADASHCIQQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQ- 168 (444)
T ss_dssp CBHHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCC-
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCc-
Confidence 99999887654 399999999999999999999999999999999999998 467899999999976543211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
.....+||+.|+|||++.+..++.++||||+||++|+|++|+.||
T Consensus 169 -----------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~DIwSlGvilyell~G~~Pf 213 (444)
T 3soa_A 169 -----------------------------------AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPF 213 (444)
T ss_dssp -----------------------------------BCCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred -----------------------------------eeecccCCcccCCHHHhcCCCCCCccccHHHHHHHHHHHhCCCCC
Confidence 112346999999999999989999999999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCcc----chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFE----GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.+... .++......+.+. .....+..+.+|+.+||+.||++|||+.|+++.
T Consensus 214 ~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpta~e~L~h 268 (444)
T 3soa_A 214 WDEDQ-------------HRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRITAAEALKH 268 (444)
T ss_dssp CCSSH-------------HHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCccH-------------HHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 65321 1111222222111 112245678899999999999999999999873
No 42
>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}
Probab=100.00 E-value=2e-41 Score=372.43 Aligned_cols=252 Identities=19% Similarity=0.223 Sum_probs=199.7
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
...+||+|+||.||+|+. .+++.||||++++.. ....+.+.+|..+++++ +||||+++++++.+.+..|+||||+
T Consensus 56 ~~~~LG~G~fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~~~~~~~~lV~E~~ 135 (396)
T 4dc2_A 56 LLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYV 135 (396)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEEEECCEEEEEEEcC
Confidence 346899999999999995 468999999997642 22334678899999887 8999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 136 ~gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~--- 207 (396)
T 4dc2_A 136 NGGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG--- 207 (396)
T ss_dssp TTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT---
T ss_pred CCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCC---
Confidence 9999999988754 39999999999999999999999999999999999999999999999999997532111
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 208 ---------------------------------~~~~~~~gt~~Y~aPE~l~~~~~~~~~DiwslGvllyell~G~~Pf~ 254 (396)
T 4dc2_A 208 ---------------------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254 (396)
T ss_dssp ---------------------------------CCBCCCCBCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSST
T ss_pred ---------------------------------CccccccCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCc
Confidence 11234579999999999999999999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM------KEALQ 775 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 775 (791)
........... ....+...........+......+.+|+.+||+.||++||++ .|+++
T Consensus 255 ~~~~~~~~~~~----~~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~ei~~ 318 (396)
T 4dc2_A 255 IVGSSDNPDQN----TEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 318 (396)
T ss_dssp TTTC------C----CHHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTSTTCSTTTHHHHHHH
T ss_pred ccccccccchh----hHHHHHHHHhccccCCCCcCCHHHHHHHHHHhcCCHhHcCCCCCCCCHHHHhc
Confidence 43221111100 011122222333333333356778999999999999999996 56654
No 43
>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.5e-41 Score=364.12 Aligned_cols=243 Identities=22% Similarity=0.301 Sum_probs=199.2
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchh------hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVD------RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
..+.||+|+||.||+|+. .+|+.||||++...... ..+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 15 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 94 (326)
T 2y0a_A 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVYENKTDVILILE 94 (326)
T ss_dssp EEEEEECCSSEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred eceEEeeCCCeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEE
Confidence 457899999999999995 46899999998654221 35779999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC----CeEEeccCcccccC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM----EPKIGDFGLERLVT 627 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~----~~kL~DFGla~~~~ 627 (791)
|+++++|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++ .+||+|||+++...
T Consensus 95 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~ 169 (326)
T 2y0a_A 95 LVAGGELFDFLAEKE-----SLTEEEATEFLKQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKID 169 (326)
T ss_dssp CCCSCBHHHHHTTSS-----CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred cCCCCCHHHHHHhcC-----CcCHHHHHHHHHHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECC
Confidence 999999999986543 399999999999999999999999999999999999999887 79999999998764
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt 707 (791)
.... .....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 170 ~~~~-------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~ 212 (326)
T 2y0a_A 170 FGNE-------------------------------------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 212 (326)
T ss_dssp TTSC-------------------------------------CCCCCSCTTTCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred CCCc-------------------------------------cccccCCcCcCCceeecCCCCCcHHHHHHHHHHHHHHHH
Confidence 2211 123459999999999999899999999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|+.||..... .+............. ...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 213 g~~pf~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 272 (326)
T 2y0a_A 213 GASPFLGDTK-------------QETLANVSAVNYEFEDEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQH 272 (326)
T ss_dssp SCCSSCCSSH-------------HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSGGGSCCHHHHHHS
T ss_pred CcCCCCCCCH-------------HHHHHHHHhcCCCcCccccccCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 9999965321 011111111111111 1234578899999999999999999999873
No 44
>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A
Probab=100.00 E-value=1.1e-41 Score=359.15 Aligned_cols=253 Identities=23% Similarity=0.329 Sum_probs=203.7
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...+.||+|+||.||++...++..||||++...... .+++.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 27 ~~~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 105 (283)
T 3gen_A 27 TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMS-EDEFIEEAKVMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGC 105 (283)
T ss_dssp EEEEECC---CEEEEEEEETTTEEEEEEEECTTSBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEECCCTTCB
T ss_pred HhHhhcCCCCCceEEEEEEcCCCeEEEEEecCCCCC-HHHHHHHHHHHhcCCCCCEeeEEEEEecCCCeEEEEeccCCCc
Confidence 345789999999999999988899999999865433 3678999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.........
T Consensus 106 L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~---- 177 (283)
T 3gen_A 106 LLNYLREMRH----RFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTS---- 177 (283)
T ss_dssp HHHHHHCGGG----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHS----
T ss_pred HHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEcccccccccccccccc----
Confidence 9999876432 38999999999999999999999999999999999999999999999999998664321110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~ 716 (791)
.....||+.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 178 -------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~t~g~~p~~~~~ 226 (283)
T 3gen_A 178 -------------------------------SVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFT 226 (283)
T ss_dssp -------------------------------TTSTTSCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTTCCTTTTSC
T ss_pred -------------------------------ccCCccCcccCCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCccccC
Confidence 112237788999999998899999999999999999998 999986531
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
. . ............ .........+.+++.+||+.||++|||++|+++.|+++..
T Consensus 227 ~---------~-~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~~~~ 280 (283)
T 3gen_A 227 N---------S-ETAEHIAQGLRL--YRPHLASEKVYTIMYSCWHEKADERPTFKILLSNILDVMD 280 (283)
T ss_dssp H---------H-HHHHHHHTTCCC--CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred h---------h-HHHHHHhcccCC--CCCCcCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHhh
Confidence 1 1 111111111111 1112234678899999999999999999999999987643
No 45
>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7
Probab=100.00 E-value=2.4e-41 Score=362.40 Aligned_cols=239 Identities=21% Similarity=0.298 Sum_probs=200.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+|+. .+|+.||+|+++... ....+.+.+|+.+++.++||||+++++++.+.+..|+||||+++
T Consensus 11 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lv~e~~~g 90 (318)
T 1fot_A 11 LRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEG 90 (318)
T ss_dssp EEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEEECSSEEEEEECCCCS
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEEEeCCEEEEEEeCCCC
Confidence 46899999999999995 479999999997542 22346788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 91 g~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~------ 159 (318)
T 1fot_A 91 GELFSLLRKSQ-----RFPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDV------ 159 (318)
T ss_dssp CBHHHHHHHTS-----SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSC------
T ss_pred CCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCc------
Confidence 99999987654 3899999999999999999999999999999999999999999999999999865321
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 160 ---------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~ 206 (318)
T 1fot_A 160 ---------------------------------TYTLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDS 206 (318)
T ss_dssp ---------------------------------BCCCCSCTTTCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ---------------------------------cccccCCccccCHhHhcCCCCCcccchhhhHHHHHHHHhCCCCCCCC
Confidence 11345999999999999999999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 775 (791)
.. ..............+......+.+++.+||..||++|| +++|+++
T Consensus 207 ~~-------------~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~~i~~ 258 (318)
T 1fot_A 207 NT-------------MKTYEKILNAELRFPPFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKN 258 (318)
T ss_dssp SH-------------HHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTTCTTSSTTTTHHHHT
T ss_pred CH-------------HHHHHHHHhCCCCCCCCCCHHHHHHHHHHhccCHHHcCCCcCCCHHHHhc
Confidence 11 11122222222222223456788999999999999999 8999885
No 46
>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*
Probab=100.00 E-value=7.6e-41 Score=357.20 Aligned_cols=262 Identities=32% Similarity=0.554 Sum_probs=207.4
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCC----chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGEN----SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
+.||+|+||.||+|.. +++.||||++... .....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 37 ~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 115 (307)
T 2nru_A 37 NKMGEGGFGVVYKGYV-NNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNG 115 (307)
T ss_dssp CEEEECSSEEEEEEES-SSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred CccccCCCeEEEEEEE-CCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEEecCCceEEEEEecCCC
Confidence 6899999999999987 5899999998653 2334578999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++....... ++++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.........
T Consensus 116 ~L~~~l~~~~~~~--~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~--- 190 (307)
T 2nru_A 116 SLLDRLSCLDGTP--PLSWHMRCKIAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTV--- 190 (307)
T ss_dssp BHHHHHHTGGGCC--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCE---
T ss_pred cHHHHHHhccCCC--CCCHHHHHHHHHHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccc---
Confidence 9999987654332 49999999999999999999999999999999999999999999999999998654321110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......||+.|+|||++.+ .++.++||||||+++|||++|+.||....
T Consensus 191 -------------------------------~~~~~~g~~~y~aPE~~~~-~~~~~~Dv~slG~il~~l~~g~~p~~~~~ 238 (307)
T 2nru_A 191 -------------------------------MTSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEIITGLPAVDEHR 238 (307)
T ss_dssp -------------------------------ECSSCCSCGGGCCHHHHTT-EECTHHHHHHHHHHHHHHHHCCCSBCTTB
T ss_pred -------------------------------cccccCCCcCcCChHHhcC-CCCccchhHHHHHHHHHHHHCCCCcccCc
Confidence 1123458999999999876 58999999999999999999999997643
Q ss_pred cCCCCcchhch-----hHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 717 GQGNGLLVEDK-----NRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 717 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
.......+... .......+..+ ..........+.+++.+||+.||++|||+.++++.|+++..+
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~l~~~L~~l~~s 307 (307)
T 2nru_A 239 EPQLLLDIKEEIEDEEKTIEDYIDKKM---NDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307 (307)
T ss_dssp SSSBTTHHHHHHHTTSCCHHHHSCSSC---SCCCHHHHHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHC--
T ss_pred chHHHHHHHHHhhhhhhhhhhhccccc---cccchHHHHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHhcC
Confidence 32211111110 00111111111 122344677899999999999999999999999999988653
No 47
>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A
Probab=100.00 E-value=1.9e-41 Score=368.92 Aligned_cols=247 Identities=20% Similarity=0.289 Sum_probs=199.6
Q ss_pred hcceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-----hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 478 ASAYILGASGSSIMYKAVL-EDGTALAVRRIGENS-----VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
...+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..|+|||
T Consensus 27 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e 106 (351)
T 3c0i_A 27 ELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETYSSDGMLYMVFE 106 (351)
T ss_dssp EEEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEE
T ss_pred EEeeEEeeCCCEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEe
Confidence 3457899999999999995 578999999985421 1135779999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC---eEEeccCcccccCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFGLERLVTG 628 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~---~kL~DFGla~~~~~ 628 (791)
|+++++|.+++....... ..+++..+..++.||+.||+|||++||+||||||+|||++.++. +||+|||+++....
T Consensus 107 ~~~g~~L~~~l~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~ 185 (351)
T 3c0i_A 107 FMDGADLCFEIVKRADAG-FVYSEAVASHYMRQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGE 185 (351)
T ss_dssp CCSSCBHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCT
T ss_pred CCCCCCHHHHHHHhcccC-CCCCHHHHHHHHHHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecC
Confidence 999999998876543221 24899999999999999999999999999999999999986654 99999999987643
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhC
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG 708 (791)
... .....+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 186 ~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g 229 (351)
T 3c0i_A 186 SGL------------------------------------VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSG 229 (351)
T ss_dssp TSC------------------------------------BCCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHS
T ss_pred CCe------------------------------------eecCCcCCcCccCHHHHcCCCCCchHhhHHHHHHHHHHHHC
Confidence 211 11234599999999999998999999999999999999999
Q ss_pred CcchhccccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+.||.+.. .+.......+.+... ...+..+.+|+.+||+.||++|||+.|+++
T Consensus 230 ~~pf~~~~--------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~s~~e~l~ 286 (351)
T 3c0i_A 230 CLPFYGTK--------------ERLFEGIIKGKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALN 286 (351)
T ss_dssp SCSSCSSH--------------HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCCCcH--------------HHHHHHHHcCCCCCCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 99996531 111112222222111 123567889999999999999999999986
No 48
>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*
Probab=100.00 E-value=5.9e-42 Score=376.68 Aligned_cols=254 Identities=23% Similarity=0.322 Sum_probs=205.5
Q ss_pred hcceeccccCceEEEEEEeC-CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 478 ASAYILGASGSSIMYKAVLE-DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...+.||+|+||.||+|+.. +++.||||+++... ....+++.+|++++++++||||+++++++...+..++||||+++
T Consensus 117 ~~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 196 (377)
T 3cbl_A 117 VLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQG 196 (377)
T ss_dssp EEEEEEEEETTEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEECSSSSCEEEEECCTT
T ss_pred EEeeEeccCCCCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEecCCCcEEEEEcCCC
Confidence 34578999999999999965 78999999997653 33345788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++..... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++..........
T Consensus 197 g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~- 271 (377)
T 3cbl_A 197 GDFLTFLRTEGA----RLRVKTLLQMVGDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAAS- 271 (377)
T ss_dssp CBHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECC-
T ss_pred CCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeec-
Confidence 999999986542 389999999999999999999999999999999999999999999999999986432211000
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~ 714 (791)
.....++..|+|||++.+..++.++|||||||++|||++ |+.||..
T Consensus 272 ---------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~el~t~g~~p~~~ 318 (377)
T 3cbl_A 272 ---------------------------------GGLRQVPVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPN 318 (377)
T ss_dssp ---------------------------------SSCCEEEGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ---------------------------------CCCCCCCcCcCCHhHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 001125677999999998889999999999999999998 8989865
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
... ....+...... ..+.+...+..+.+++.+||+.||++|||+.++++.|++|.
T Consensus 319 ~~~----------~~~~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~~i~~~L~~i~ 373 (377)
T 3cbl_A 319 LSN----------QQTREFVEKGG--RLPCPELCPDAVFRLMEQCWAYEPGQRPSFSTIYQELQSIR 373 (377)
T ss_dssp SCH----------HHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCH----------HHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHHHH
Confidence 311 11122222111 11222224567889999999999999999999999998875
No 49
>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.3e-41 Score=365.22 Aligned_cols=242 Identities=18% Similarity=0.230 Sum_probs=200.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.+.||+|+||.||+|.. .+++.||+|.+..... ....+.+|++++++++||||+++++++.+.+..++||||+++|+|
T Consensus 10 ~~~lG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~g~~L 88 (321)
T 1tki_A 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGT-DQVLVKKEISILNIARHRNILHLHESFESMEELVMIFEFISGLDI 88 (321)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCTH-HHHHHHHHHHHHHHSCCTTBCCEEEEEEETTEEEEEECCCCCCBH
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEEecCcc-cHHHHHHHHHHHHhCCCCCCCeEeEEEecCCEEEEEEEeCCCCCH
Confidence 46899999999999995 4689999999976533 346789999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC--CCCeEEeccCcccccCCCCCCCcCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN--DMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
.+++..... .+++.++..++.|++.||+|||+.||+||||||+|||++. ++.+||+|||+++.......
T Consensus 89 ~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~----- 159 (321)
T 1tki_A 89 FERINTSAF----ELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDN----- 159 (321)
T ss_dssp HHHHTSSSC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCE-----
T ss_pred HHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCc-----
Confidence 998865432 4899999999999999999999999999999999999987 78999999999987643211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||....
T Consensus 160 --------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 207 (321)
T 1tki_A 160 --------------------------------FRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAET 207 (321)
T ss_dssp --------------------------------EEEEESCGGGSCHHHHTTCEECHHHHHHHHHHHHHHHHHSSCTTCCSS
T ss_pred --------------------------------cccccCChhhcCcHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCcCCC
Confidence 112348999999999998888999999999999999999999996532
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. .+............. ...+.++.+++.+||..||++|||+.|+++.
T Consensus 208 ~-------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~Rpt~~e~l~h 258 (321)
T 1tki_A 208 N-------------QQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLVKERKSRMTASEALQH 258 (321)
T ss_dssp H-------------HHHHHHHHHTCCCCCHHHHTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred H-------------HHHHHHHHcCCCCCChhhhccCCHHHHHHHHHHcCCChhHCcCHHHHhcC
Confidence 1 112222222222211 1235678999999999999999999999873
No 50
>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*
Probab=100.00 E-value=1.4e-41 Score=367.97 Aligned_cols=241 Identities=22% Similarity=0.236 Sum_probs=198.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
.++||+|+||.||+|+. .+|+.||||+++... ....+.+..|.++++++ +||||+++++++.+.+..|+||||++
T Consensus 22 ~~~lG~G~fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 101 (345)
T 1xjd_A 22 HKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYLN 101 (345)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEEEeCCEEEEEEeCCC
Confidence 46899999999999996 468999999997542 23346678899999877 89999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 102 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~--- 173 (345)
T 1xjd_A 102 GGDLMYHIQSCH-----KFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDA--- 173 (345)
T ss_dssp TCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTC---
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCC---
Confidence 999999988754 389999999999999999999999999999999999999999999999999975422110
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 174 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 220 (345)
T 1xjd_A 174 ---------------------------------KTNTFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHG 220 (345)
T ss_dssp ---------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ---------------------------------cccCCCCCcccCChhhhcCCCCCChhhhHHHHHHHHHHhcCCCCCCC
Confidence 12245699999999999999999999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHH-HHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMK-EAL 774 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~-evl 774 (791)
... .++...........+......+.+++.+||..||++||++. |++
T Consensus 221 ~~~-------------~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dp~~R~~~~~~i~ 268 (345)
T 1xjd_A 221 QDE-------------EELFHSIRMDNPFYPRWLEKEAKDLLVKLFVREPEKRLGVRGDIR 268 (345)
T ss_dssp SSH-------------HHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSBTTBSCGG
T ss_pred CCH-------------HHHHHHHHhCCCCCCcccCHHHHHHHHHHhcCCHhHcCCChHHHH
Confidence 321 11222222222222222456788999999999999999997 664
No 51
>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.7e-41 Score=365.95 Aligned_cols=241 Identities=21% Similarity=0.298 Sum_probs=198.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+++++.++||||+++++++...+..++||||+ +
T Consensus 14 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~lv~E~~-~ 92 (336)
T 3h4j_B 14 RETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVITTPTDIVMVIEYA-G 92 (336)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCC-C
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEECC-C
Confidence 46899999999999995 678999999986532 222357899999999999999999999999999999999999 7
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++.+++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||++.......
T Consensus 93 g~l~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~----- 162 (336)
T 3h4j_B 93 GELFDYIVEKK-----RMTEDEGRRFFQQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGN----- 162 (336)
T ss_dssp EEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSB-----
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCc-----
Confidence 89999887654 39999999999999999999999999999999999999999999999999998654221
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....+||+.|+|||++.+..+ ++++|||||||++|+|++|+.||.+
T Consensus 163 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~ 210 (336)
T 3h4j_B 163 --------------------------------FLKTSCGSPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDD 210 (336)
T ss_dssp --------------------------------TTCCCTTSTTTSCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBC
T ss_pred --------------------------------ccccccCCcCcCCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCC
Confidence 1123469999999999988776 7899999999999999999999976
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.........+.. ..+..+...+..+.+++.+||+.||.+|||++|+++.
T Consensus 211 ~~~~~~~~~i~~-------------~~~~~p~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 259 (336)
T 3h4j_B 211 EFIPNLFKKVNS-------------CVYVMPDFLSPGAQSLIRRMIVADPMQRITIQEIRRD 259 (336)
T ss_dssp SSSTTCBCCCCS-------------SCCCCCTTSCHHHHHHHHTTSCSSGGGSCCHHHHTTC
T ss_pred ccHHHHHHHHHc-------------CCCCCcccCCHHHHHHHHHHcCCChhHCcCHHHHHhC
Confidence 543322222111 1111112245678899999999999999999999863
No 52
>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}
Probab=100.00 E-value=6.7e-41 Score=369.03 Aligned_cols=259 Identities=23% Similarity=0.309 Sum_probs=207.7
Q ss_pred hhcceeccccCceEEEEEEe--------CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCce
Q 003847 477 KASAYILGASGSSIMYKAVL--------EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEK 546 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~--------~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 546 (791)
+...+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+++++++ +||||+++++++...+..
T Consensus 71 y~i~~~LG~G~~g~Vy~a~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~~~~~~~ 150 (382)
T 3tt0_A 71 LVLGKPLGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPL 150 (382)
T ss_dssp EEEEEEEEECSSEEEEEEEEETSSTTCTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSC
T ss_pred eEeeeEEecCCCeEEEEEEEccccccccccceEEEEEeeccccCHHHHHHHHHHHHHHHHhcCCchhhhheeeeccCCce
Confidence 33457899999999999984 23468999999765 334457899999999999 999999999999999999
Q ss_pred EEEEeccCCCChhHHHHhhcCC-----------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCe
Q 003847 547 LIIYDFVPNGSLANARYRKMGS-----------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~-----------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~ 615 (791)
++||||+++|+|.+++...... ....+++.+++.|+.||+.||+|||+.||+||||||+|||++.++.+
T Consensus 151 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~ 230 (382)
T 3tt0_A 151 YVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVM 230 (382)
T ss_dssp EEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCE
T ss_pred EEEEEecCCCcHHHHHHHhcccccccccccccccccccCHHHHHHHHHHHHHHHHHHHhCCEecCCCCcceEEEcCCCcE
Confidence 9999999999999999876421 11249999999999999999999999999999999999999999999
Q ss_pred EEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhh
Q 003847 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDV 695 (791)
Q Consensus 616 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDv 695 (791)
||+|||+++......... ......||+.|+|||++.+..++.++||
T Consensus 231 kL~DFG~a~~~~~~~~~~----------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di 276 (382)
T 3tt0_A 231 KIADFGLARDIHHIDYYK----------------------------------KTTNGRLPVKWMAPEALFDRIYTHQSDV 276 (382)
T ss_dssp EECSCSCCCCSSCCCTTC----------------------------------CCTTCCCGGGGSCHHHHHSCCCCHHHHH
T ss_pred EEcccCcccccccccccc----------------------------------cccCCCCCcceeCHHHhcCCCCCchhHH
Confidence 999999998664322110 1122347889999999999999999999
Q ss_pred HHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 696 YSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 696 wSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
|||||++|||++ |+.||..... .............. ........+.+++.+||+.||++|||++|++
T Consensus 277 wslG~il~ellt~g~~p~~~~~~----------~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dP~~Rps~~ell 344 (382)
T 3tt0_A 277 WSFGVLLWEIFTLGGSPYPGVPV----------EELFKLLKEGHRMD--KPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 344 (382)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCH----------HHHHHHHHTTCCCC--CCSSCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCCCCH----------HHHHHHHHcCCCCC--CCccCCHHHHHHHHHHcCCChhhCcCHHHHH
Confidence 999999999999 9999864311 11112221111111 1122456788999999999999999999999
Q ss_pred HHhccCC
Q 003847 775 QALEKIP 781 (791)
Q Consensus 775 ~~L~~i~ 781 (791)
+.|+++.
T Consensus 345 ~~L~~~~ 351 (382)
T 3tt0_A 345 EDLDRIV 351 (382)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998863
No 53
>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.2e-40 Score=357.84 Aligned_cols=259 Identities=21% Similarity=0.254 Sum_probs=205.6
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccC--ceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD--EKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lv~e~~~~ 555 (791)
.++||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~~ 93 (319)
T 4euu_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (319)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEEECCTT
T ss_pred EEEecCCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeecCCCceEEEEEeCCCC
Confidence 468999999999999954 58999999997643 333567889999999999999999999998765 67999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe----cCCCCeEEeccCcccccCCCCC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL----GNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl----~~~~~~kL~DFGla~~~~~~~~ 631 (791)
++|.+++....... .+++.+++.|+.||+.||+|||+.||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 94 ~~L~~~l~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~ 171 (319)
T 4euu_A 94 GSLYTVLEEPSNAY--GLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171 (319)
T ss_dssp CBHHHHHHSGGGTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCC
T ss_pred CCHHHHHHHhcccc--CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCc
Confidence 99999998764332 38999999999999999999999999999999999999 7788899999999987643211
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc--------CCCCCCchhhHHHHHHHH
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR--------SIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~--------~~~~~~~sDvwSlGvil~ 703 (791)
.....||+.|+|||++. +..++.++|||||||++|
T Consensus 172 -------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~ 214 (319)
T 4euu_A 172 -------------------------------------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY 214 (319)
T ss_dssp -------------------------------------BCCCCSCGGGCCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHH
T ss_pred -------------------------------------eeecccCCCccCHHHhhhccccccccCCCCcHHHHHHHHHHHH
Confidence 11345899999999986 567899999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHhh---------------------hcCccchHHHHHHHHHHHhhccCC
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAI---------------------RADFEGKEEALLSCFKLGYSCASP 762 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~l~~li~~cl~~ 762 (791)
||++|+.||........ .......+..... .............+.+++.+||+.
T Consensus 215 el~~g~~pf~~~~~~~~-----~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~L~~ 289 (319)
T 4euu_A 215 HAATGSLPFRPFEGPRR-----NKEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA 289 (319)
T ss_dssp HHHHSSCSEECTTCGGG-----CHHHHHHHHHHCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCC
T ss_pred HHHhCCCCCCCCCccch-----hHHHHHHHhcCCCcccchhhhcccCCccccCccCCcccccchhHHHHhHHHHHHhccC
Confidence 99999999964321110 0111111111110 011122345677889999999999
Q ss_pred CCCCCCCHHHHHHHhccCCC
Q 003847 763 LPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 763 dP~~RPs~~evl~~L~~i~~ 782 (791)
||++|||++|+++...+...
T Consensus 290 dP~~R~s~~ell~h~~d~~~ 309 (319)
T 4euu_A 290 DQEKCWGFDQFFAETSDILH 309 (319)
T ss_dssp CTTTSCCHHHHHHHHHHHTC
T ss_pred ChhhhccHHHhhhccHHHhh
Confidence 99999999999999876554
No 54
>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...
Probab=100.00 E-value=3.5e-41 Score=365.96 Aligned_cols=240 Identities=18% Similarity=0.217 Sum_probs=201.5
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
....||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..|+||||++
T Consensus 45 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~ 124 (350)
T 1rdq_E 45 RIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVA 124 (350)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCT
T ss_pred EEEEeecCcCcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCEEEEEEcCCC
Confidence 346899999999999995 479999999996542 2335678899999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 125 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~---- 195 (350)
T 1rdq_E 125 GGEMFSHLRRIG-----RFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRT---- 195 (350)
T ss_dssp TCBHHHHHHHHC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCB----
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCc----
Confidence 999999998754 38999999999999999999999999999999999999999999999999998654211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 196 -----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~ 240 (350)
T 1rdq_E 196 -----------------------------------WTLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFA 240 (350)
T ss_dssp -----------------------------------CCCEECGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred -----------------------------------ccccCCccccCHHHhcCCCCCCcCCEecccHhHhHHhhCCCCCCC
Confidence 124599999999999999999999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-----MKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 775 (791)
... .++......+....+......+.+++.+||+.||++||+ ++|+++
T Consensus 241 ~~~-------------~~~~~~i~~~~~~~p~~~~~~~~~li~~lL~~dp~~R~~~~~~~~~ei~~ 293 (350)
T 1rdq_E 241 DQP-------------IQIYEKIVSGKVRFPSHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKN 293 (350)
T ss_dssp SSH-------------HHHHHHHHHCCCCCCTTCCHHHHHHHHHHSCSCTTTCTTSSTTTTHHHHT
T ss_pred CCH-------------HHHHHHHHcCCCCCCCCCCHHHHHHHHHHhhcCHHhccCCccCCHHHHHh
Confidence 311 122222222222223335677899999999999999998 888875
No 55
>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*
Probab=100.00 E-value=6.5e-41 Score=361.04 Aligned_cols=243 Identities=19% Similarity=0.240 Sum_probs=191.9
Q ss_pred cceeccccCceEEEEEEe----CCCcEEEEEEcCCCc----hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEE
Q 003847 479 SAYILGASGSSIMYKAVL----EDGTALAVRRIGENS----VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
..+.||+|+||.||+++. .+|+.||||+++... ......+.+|++++++++||||+++++++...+..|+||
T Consensus 21 ~~~~lG~G~~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 100 (327)
T 3a62_A 21 LLRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL 100 (327)
T ss_dssp EEEEEEEETTEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEEECSSCEEEEE
T ss_pred EEEEEEeCCCEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEEEcCCEEEEEE
Confidence 346899999999999996 478999999997642 223456788999999999999999999999999999999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++++|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 101 e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 175 (327)
T 3a62_A 101 EYLSGGELFMQLEREG-----IFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDG 175 (327)
T ss_dssp ECCTTEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC-------
T ss_pred eCCCCCcHHHHHHhCC-----CCCHHHHHHHHHHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCC
Confidence 9999999999987654 38999999999999999999999999999999999999999999999999987543211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
. .....+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 176 ~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 219 (327)
T 3a62_A 176 T------------------------------------VTHTFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAP 219 (327)
T ss_dssp ---------------------------------------CTTSSCCTTSCHHHHTTSCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred c------------------------------------cccccCCCcCccCHhhCcCCCCCCcccchhHHHHHHHHHHCCC
Confidence 0 1123469999999999999899999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQ 775 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 775 (791)
||..... ..............+......+.+++.+||..||++|| ++.|+++
T Consensus 220 pf~~~~~-------------~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dp~~R~~~~~~~~~e~l~ 276 (327)
T 3a62_A 220 PFTGENR-------------KKTIDKILKCKLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQA 276 (327)
T ss_dssp SCCCSSH-------------HHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSCGGGSTTSSTTTHHHHHH
T ss_pred CCCCCCH-------------HHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhcCHhhccCCCCCCHHHHHc
Confidence 9965311 11122222222222223456788999999999999999 7888876
No 56
>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}
Probab=100.00 E-value=1e-40 Score=360.10 Aligned_cols=257 Identities=23% Similarity=0.321 Sum_probs=197.4
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCc-----------
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE----------- 545 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~----------- 545 (791)
..+.||+|+||.||+|+.. +|+.||||++... .....+.+.+|++++++++||||++++++|.+.+.
T Consensus 10 ~~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~ 89 (332)
T 3qd2_B 10 PIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIW 89 (332)
T ss_dssp EEEEEECC-CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC--
T ss_pred eeeEecCCCCeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhh
Confidence 3468999999999999965 7999999999654 33345789999999999999999999999866432
Q ss_pred ----------------------------------------------eEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHH
Q 003847 546 ----------------------------------------------KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARL 579 (791)
Q Consensus 546 ----------------------------------------------~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~ 579 (791)
.++||||+++++|.+++....... ..++..++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~--~~~~~~~~ 167 (332)
T 3qd2_B 90 LKDESTDWPLSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLE--DREHGVCL 167 (332)
T ss_dssp ------------------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGG--GSCHHHHH
T ss_pred hccccccccccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCcc--chhhHHHH
Confidence 799999999999999998754332 36777899
Q ss_pred HHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCC
Q 003847 580 KIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGP 659 (791)
Q Consensus 580 ~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 659 (791)
.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++..............
T Consensus 168 ~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~--------------------- 226 (332)
T 3qd2_B 168 HIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP--------------------- 226 (332)
T ss_dssp HHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC------------------------------
T ss_pred HHHHHHHHHHHHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhcccccc---------------------
Confidence 99999999999999999999999999999999999999999999987644321110000
Q ss_pred CCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhh
Q 003847 660 GPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIR 739 (791)
Q Consensus 660 ~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~ 739 (791)
..........+||+.|+|||++.+..++.++|||||||++|||++|..|+... .........
T Consensus 227 ---~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~~~~~~~~---------------~~~~~~~~~ 288 (332)
T 3qd2_B 227 ---MPAYATHTGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMER---------------VRIITDVRN 288 (332)
T ss_dssp --------CCCSCC-CGGGSCHHHHHCCCCCTHHHHHHHHHHHHHHHSCCCCHHHH---------------HHHHHHHHT
T ss_pred ---ccccccccccCCCcCccChHHhcCCCCcchhhHHHHHHHHHHHHHcCCChhHH---------------HHHHHHhhc
Confidence 00011233456999999999999999999999999999999999998776332 111111111
Q ss_pred cCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 740 ADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 740 ~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
...+ ........+.+++.+||+.||++|||+.|+++.
T Consensus 289 ~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~l~~ 326 (332)
T 3qd2_B 289 LKFPLLFTQKYPQEHMMVQDMLSPSPTERPEATDIIEN 326 (332)
T ss_dssp TCCCHHHHHHCHHHHHHHHHHHCSSGGGSCCHHHHHHS
T ss_pred cCCCcccccCChhHHHHHHHHccCCCCcCCCHHHHhhc
Confidence 1211 123345677899999999999999999999873
No 57
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Probab=100.00 E-value=3.1e-41 Score=380.10 Aligned_cols=255 Identities=23% Similarity=0.380 Sum_probs=207.7
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...+.||+|+||.||+|...+++.||||+++.... ..+.+.+|+++|++++||||+++++++. .+..++||||+++|+
T Consensus 191 ~~~~~lG~G~fg~V~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~iv~l~~~~~-~~~~~lv~e~~~~g~ 268 (454)
T 1qcf_A 191 KLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSM-SVEAFLAEANVMKTLQHDKLVKLHAVVT-KEPIYIITEFMAKGS 268 (454)
T ss_dssp EEEEEEECCSSEEEEEEEETTTEEEEEEEECTTSB-CHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEECCCTTCB
T ss_pred EEEEEcccCCceEEEEEEECCccEEEEEEecCCCc-cHHHHHHHHHHHhhCCCCCEeeEEEEEe-CCccEEEEeecCCCc
Confidence 34578999999999999998899999999986543 3578999999999999999999999986 667899999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++...... .+++..+..++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........
T Consensus 269 L~~~l~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~----- 340 (454)
T 1qcf_A 269 LLDFLKSDEGS---KQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT----- 340 (454)
T ss_dssp HHHHHHSHHHH---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHH-----
T ss_pred HHHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCcee-----
Confidence 99999765321 2889999999999999999999999999999999999999999999999999876422110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~ 716 (791)
......+|..|+|||++....++.++|||||||++|||+| |+.||.+..
T Consensus 341 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~t~g~~P~~~~~ 390 (454)
T 1qcf_A 341 ------------------------------AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMS 390 (454)
T ss_dssp ------------------------------TTCSSSSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTTCC
T ss_pred ------------------------------ccCCCcccccccCHHHhccCCCCcHHHHHhHHHHHHHHHhCCCCCCCCCC
Confidence 0112236788999999998899999999999999999999 999996531
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
. ......+.... ..+.+...+..+.+++.+||+.||++|||+++|++.|+.+....
T Consensus 391 ~----------~~~~~~i~~~~--~~~~~~~~~~~l~~li~~cl~~dp~~RPt~~~i~~~L~~~~~~~ 446 (454)
T 1qcf_A 391 N----------PEVIRALERGY--RMPRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFYTAT 446 (454)
T ss_dssp H----------HHHHHHHHHTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSSSS
T ss_pred H----------HHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHHHHhcc
Confidence 1 11111111111 11222335678899999999999999999999999999986543
No 58
>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*
Probab=100.00 E-value=7.9e-41 Score=362.61 Aligned_cols=251 Identities=19% Similarity=0.232 Sum_probs=199.8
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
...||+|+||.||+|+. .+++.||||++... .....+.+.+|..+++++ +||||+++++++.+.+..|+||||++
T Consensus 14 ~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~e~~~ 93 (345)
T 3a8x_A 14 LRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVN 93 (345)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEecCCeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEEEeCCEEEEEEeCCC
Confidence 46899999999999995 46899999999754 233456788999999988 89999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 94 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~---- 164 (345)
T 3a8x_A 94 GGDLMFHMQRQR-----KLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPG---- 164 (345)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTT----
T ss_pred CCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCC----
Confidence 999999987654 39999999999999999999999999999999999999999999999999997532111
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 165 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 212 (345)
T 3a8x_A 165 --------------------------------DTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDI 212 (345)
T ss_dssp --------------------------------CCBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred --------------------------------CcccccCCCccccCccccCCCCCChHHhHHHHHHHHHHHHhCCCCcCC
Confidence 012245699999999999999999999999999999999999999964
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH------HHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM------KEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~------~evl~ 775 (791)
......... .. ...+...........+......+.+++.+||+.||++||++ .|+++
T Consensus 213 ~~~~~~~~~-~~---~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~~i~~ 275 (345)
T 3a8x_A 213 VGSSDNPDQ-NT---EDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQG 275 (345)
T ss_dssp TTC--------C---HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCCTTTHHHHHHT
T ss_pred ccccccccc-cc---HHHHHHHHHcCCCCCCCCCCHHHHHHHHHHhcCCHhHCCCCCCcCCHHHHhc
Confidence 211111000 00 11122222222222233356678999999999999999996 56654
No 59
>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*
Probab=100.00 E-value=4.4e-41 Score=365.24 Aligned_cols=242 Identities=21% Similarity=0.246 Sum_probs=199.9
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+||+|+||.||+|+.. +|+.||||+++... ....+.+..|.++++.+ +||||+++++++.+.+..|+||||++
T Consensus 25 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~~~~~~~~lv~E~~~ 104 (353)
T 2i0e_A 25 LMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVN 104 (353)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEEEcCCEEEEEEeCCC
Confidence 468999999999999965 58999999997542 23346788999999988 79999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 105 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---- 175 (353)
T 2i0e_A 105 GGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDG---- 175 (353)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTT----
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCC----
Confidence 999999988654 39999999999999999999999999999999999999999999999999998532111
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 176 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 223 (353)
T 2i0e_A 176 --------------------------------VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEG 223 (353)
T ss_dssp --------------------------------CCBCCCCSCGGGCCHHHHTTCCBSTHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred --------------------------------cccccccCCccccChhhhcCCCcCCcccccchHHHHHHHHcCCCCCCC
Confidence 012245699999999999999999999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-----HHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-----MKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-----~~evl~ 775 (791)
... .++...........+...+..+.+++.+||..||++||+ ++|+++
T Consensus 224 ~~~-------------~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~~i~~ 276 (353)
T 2i0e_A 224 EDE-------------DELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 276 (353)
T ss_dssp SSH-------------HHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSCTTSCTTCSTTHHHHHHT
T ss_pred CCH-------------HHHHHHHHhCCCCCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 311 122222222333333335678899999999999999995 577765
No 60
>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*
Probab=100.00 E-value=2e-41 Score=360.57 Aligned_cols=254 Identities=21% Similarity=0.273 Sum_probs=194.5
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhc--cCCCCccceeeEEEcc----CceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAK--LVHPNLVRIRGFYWGV----DEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~----~~~~lv~e~~ 553 (791)
.+.||+|+||.||+|+. +++.||||++.... .+.+..|.+++.. ++||||+++++++... ...++||||+
T Consensus 13 ~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~~~~~~~~~lv~e~~ 88 (301)
T 3q4u_A 13 LECVGKGRYGEVWRGSW-QGENVAVKIFSSRD---EKSWFRETELYNTVMLRHENILGFIASDMTSRHSSTQLWLITHYH 88 (301)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHTCCCCTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred EEeeccCCCcEEEEEEE-CCEEEEEEEecccc---chhhHHHHHHHHHhhccCcCeeeEEEeeccccCCCceeEEehhhc
Confidence 46899999999999988 68999999997543 3455566666655 7999999999987653 4579999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLH--------EKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH--------~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
++|+|.+++... .+++..++.|+.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.
T Consensus 89 ~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~ 162 (301)
T 3q4u_A 89 EMGSLYDYLQLT------TLDTVSCLRIVLSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVM 162 (301)
T ss_dssp TTCBHHHHHTTC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEE
T ss_pred cCCCHHHHHhhc------ccCHHHHHHHHHHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeee
Confidence 999999998543 3999999999999999999999 99999999999999999999999999999987
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC------CCCCchhhHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI------KPNPKWDVYSFG 699 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~------~~~~~sDvwSlG 699 (791)
......... .......||+.|+|||++.+. .++.++||||||
T Consensus 163 ~~~~~~~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DvwslG 210 (301)
T 3q4u_A 163 HSQSTNQLD--------------------------------VGNNPRVGTKRYMAPEVLDETIQVDCFDSYKRVDIWAFG 210 (301)
T ss_dssp EETTTTEEE--------------------------------CCCCCCCCCGGGCCHHHHTTCCCTTCHHHHHHHHHHHHH
T ss_pred ccccccccc--------------------------------ccccccccccceeChhhhcCcCCCCcccCCchhhHHHHH
Confidence 653322110 011234599999999999876 445799999999
Q ss_pred HHHHHHHhC----------CcchhccccCCCCcchhchhHHHHHHH-HhhhcCcc---chHHHHHHHHHHHhhccCCCCC
Q 003847 700 VILLELLTG----------KVIVVDELGQGNGLLVEDKNRAIRLAD-AAIRADFE---GKEEALLSCFKLGYSCASPLPQ 765 (791)
Q Consensus 700 vil~elltG----------~~pf~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~l~~li~~cl~~dP~ 765 (791)
|++|||++| +.||.......... ........ .......+ ........+.+++.+||+.||+
T Consensus 211 ~il~el~tg~~~~~~~~~~~~pf~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 285 (301)
T 3q4u_A 211 LVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSF-----EDMRKVVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPS 285 (301)
T ss_dssp HHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCCH-----HHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHCCSSGG
T ss_pred HHHHHHHhhhcCccccccccccccccCCCCcch-----hhhhHHHhccCCCCCCChhhccCccHHHHHHHHHHHhhcChh
Confidence 999999999 67775432211110 01111110 00111111 1223667899999999999999
Q ss_pred CCCCHHHHHHHhccC
Q 003847 766 KRPSMKEALQALEKI 780 (791)
Q Consensus 766 ~RPs~~evl~~L~~i 780 (791)
+|||+.|+++.|++|
T Consensus 286 ~Rps~~~i~~~L~~i 300 (301)
T 3q4u_A 286 ARLTALRIKKTLTKI 300 (301)
T ss_dssp GSCCHHHHHHHHHHH
T ss_pred hCCCHHHHHHHHhcc
Confidence 999999999999875
No 61
>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}
Probab=100.00 E-value=5.8e-41 Score=367.58 Aligned_cols=245 Identities=18% Similarity=0.266 Sum_probs=199.3
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
....||+|+||.||+|+. .+++.||+|++.... ....+.+.+|++++++++|||||++++++.+.+..|+||||++
T Consensus 19 i~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lv~e~~~ 98 (384)
T 4fr4_A 19 ILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLL 98 (384)
T ss_dssp EEEEEECCTTCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 346899999999999995 468999999986532 2335678899999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+....
T Consensus 99 gg~L~~~l~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~---- 169 (384)
T 4fr4_A 99 GGDLRYHLQQNV-----HFKEETVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET---- 169 (384)
T ss_dssp TEEHHHHHHTTC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTC----
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCC----
Confidence 999999987643 39999999999999999999999999999999999999999999999999998754221
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC---CCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS---IKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~---~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.....+||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 170 ---------------------------------~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~P 216 (384)
T 4fr4_A 170 ---------------------------------QITTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216 (384)
T ss_dssp ---------------------------------CBCCCCSCGGGCCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCS
T ss_pred ---------------------------------ceeccCCCccccCCeeeccCCCCCCCccceeechHHHHHHHHhCCCC
Confidence 1224569999999999964 4589999999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-HHHHHH
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-MKEALQ 775 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~ 775 (791)
|....... ...+...........+......+.+|+.+||+.||++||+ ++++++
T Consensus 217 f~~~~~~~----------~~~~~~~~~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~s~~~~l~~ 271 (384)
T 4fr4_A 217 YHIRSSTS----------SKEIVHTFETTVVTYPSAWSQEMVSLLKKLLEPNPDQRFSQLSDVQN 271 (384)
T ss_dssp SCCCTTSC----------HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCSHHHHHT
T ss_pred CCCCCCcc----------HHHHHHHHhhcccCCCCcCCHHHHHHHHHHhcCCHhHhcccHHHHHc
Confidence 96432211 1112222222222222335577899999999999999998 677664
No 62
>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*
Probab=100.00 E-value=5e-41 Score=362.57 Aligned_cols=259 Identities=14% Similarity=0.109 Sum_probs=203.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+++++++ +||||+++++++...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (330)
T 2izr_A 14 GKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSR--APQLHLEYRFYKQLGSGDGIPQVYYFGPCGKYNAMVLELL-GPS 90 (330)
T ss_dssp EEECCC-CTTSEEEEEETTTTEEEEEEEEETTCS--SCCHHHHHHHHHHHCSCTTSCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEeeccCCceEEEEEECCCCcEEEEEEeccccc--hHHHHHHHHHHHHhhCCCCCCEEEEEEecCCccEEEEEeC-CCC
Confidence 46899999999999994 6799999999865432 24688999999999 9999999999999999999999999 999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC-----eEEeccCcccccCCCCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME-----PKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~-----~kL~DFGla~~~~~~~~~ 632 (791)
|.+++..... .+++..++.|+.|++.||+|||+.||+||||||+|||++.++. +||+|||+++........
T Consensus 91 L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~ 166 (330)
T 2izr_A 91 LEDLFDLCDR----TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETK 166 (330)
T ss_dssp HHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTC
T ss_pred HHHHHHHcCC----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCC
Confidence 9999886532 4999999999999999999999999999999999999998887 999999999876533221
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
... +.......+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 167 ~~~-----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~ell~g~~Pf 217 (330)
T 2izr_A 167 KHI-----------------------------PYREHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFLRGSLPW 217 (330)
T ss_dssp CBC-----------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred ccc-----------------------------cccccCCcCCCccccChHHHcCCCCCchhHHHHHHHHHHHHhcCCCCc
Confidence 100 111223556999999999999999999999999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
.+........ ....+..................+.+++..||+.||.+||++++|++.|+++
T Consensus 218 ~~~~~~~~~~------~~~~i~~~~~~~~~~~~~~~~p~~~~li~~~l~~~p~~RP~~~~l~~~l~~~ 279 (330)
T 2izr_A 218 QGLKADTLKE------RYQKIGDTKRATPIEVLCENFPEMATYLRYVRRLDFFEKPDYDYLRKLFTDL 279 (330)
T ss_dssp TTCCCSSHHH------HHHHHHHHHHHSCHHHHTTTCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHH
T ss_pred cccccccHHH------HHHHHHhhhccCCHHHHhccChHHHHHHHHHHhCCCCCCCCHHHHHHHHHHH
Confidence 7642221111 1111111111111000000112789999999999999999999999999765
No 63
>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0
Probab=100.00 E-value=3.6e-41 Score=352.85 Aligned_cols=246 Identities=29% Similarity=0.425 Sum_probs=190.7
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCch----hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSV----DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~----~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||+|+||.||+|... ++.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 89 (271)
T 3dtc_A 11 LEEIIGIGGFGKVYRAFWI-GDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFAR 89 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEECCC--CEEEEECCT
T ss_pred eeeeeccCCCeEEEEEEEc-CCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecCCceEEEEEcCC
Confidence 3568999999999999975 89999999875422 234678999999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---CeecCCCCCCeEecC--------CCCeEEeccCcc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK---HVHGNLKPRNVLLGN--------DMEPKIGDFGLE 623 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~---ivHrDlkp~NILl~~--------~~~~kL~DFGla 623 (791)
+++|.+++... .+++..++.++.|++.||+|||+.| |+||||||+||+++. ++.+||+|||++
T Consensus 90 ~~~L~~~~~~~------~~~~~~~~~i~~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~ 163 (271)
T 3dtc_A 90 GGPLNRVLSGK------RIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLA 163 (271)
T ss_dssp TEEHHHHHTSS------CCCHHHHHHHHHHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC-
T ss_pred CCCHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCcc
Confidence 99999988533 3899999999999999999999998 899999999999986 678999999999
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ 703 (791)
+....... ....||+.|+|||++.+..++.++||||||+++|
T Consensus 164 ~~~~~~~~--------------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ 205 (271)
T 3dtc_A 164 REWHRTTK--------------------------------------MSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLW 205 (271)
T ss_dssp --------------------------------------------------CCGGGSCHHHHHHCCCSHHHHHHHHHHHHH
T ss_pred cccccccc--------------------------------------cCCCCccceeCHHHhccCCCCchhhHHHHHHHHH
Confidence 76542211 1234899999999999989999999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
||++|+.||..... ............. .+.....+..+.+++.+||+.||++|||+.|+++.|++|
T Consensus 206 ~l~~g~~p~~~~~~---------~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~L~~l 271 (271)
T 3dtc_A 206 ELLTGEVPFRGIDG---------LAVAYGVAMNKLA--LPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNILDQLTTI 271 (271)
T ss_dssp HHHHCCCTTTTSCH---------HHHHHHHHTSCCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHC-
T ss_pred HHHhCCCCCCCCCH---------HHHHHhhhcCCCC--CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHHHHHhcC
Confidence 99999999965311 0111111111111 111222456788999999999999999999999999875
No 64
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Probab=100.00 E-value=4.1e-41 Score=382.88 Aligned_cols=255 Identities=28% Similarity=0.379 Sum_probs=209.0
Q ss_pred hcceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 478 ASAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...+.||+|+||.||+|+.. +++.||||+++.... ..++|.+|+++|++++||||+++++++...+..++||||+++|
T Consensus 223 ~~~~~lG~G~fg~Vy~~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~l~~~~~~~~~~~lv~E~~~~g 301 (495)
T 1opk_A 223 TMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYG 301 (495)
T ss_dssp EEEEESGGGTTSSEEEEEEGGGTEEEEEEECCSSSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEECCTTC
T ss_pred eeeeEecCCCCeEEEEEEEcCCCeEEEEEEecCccc-chHHHHHHHHHHHhcCCCCEeeEEEEEecCCcEEEEEEccCCC
Confidence 34578999999999999965 489999999986543 3578999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++...... .+++..++.|+.||+.||+|||+++|+||||||+|||++.++.+||+|||+++........
T Consensus 302 ~L~~~l~~~~~~---~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~---- 374 (495)
T 1opk_A 302 NLLDYLRECNRQ---EVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYT---- 374 (495)
T ss_dssp BHHHHHHHSCTT---TSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEE----
T ss_pred CHHHHHHhcCcC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCcee----
Confidence 999999764332 3899999999999999999999999999999999999999999999999999876432111
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~ 715 (791)
......++..|+|||++.+..++.++|||||||++|||++ |+.||...
T Consensus 375 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlG~~l~el~t~g~~p~~~~ 423 (495)
T 1opk_A 375 -------------------------------AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGI 423 (495)
T ss_dssp -------------------------------CCTTCCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCSSTTC
T ss_pred -------------------------------ecCCCcCCcceeCHhHHhcCCCCcHHhHHhHHHHHHHHHhCCCCCCCCC
Confidence 0112236788999999998889999999999999999999 88898653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
... ...+.+...... ..+...+..+.+|+.+||+.||++|||+.++++.|+.+...
T Consensus 424 ~~~----------~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~el~~~L~~~~~~ 479 (495)
T 1opk_A 424 DLS----------QVYELLEKDYRM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 479 (495)
T ss_dssp CGG----------GHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSCSS
T ss_pred CHH----------HHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCcChhHCcCHHHHHHHHHHHHhc
Confidence 211 112222222111 12223556788999999999999999999999999998654
No 65
>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*
Probab=100.00 E-value=1.3e-40 Score=356.10 Aligned_cols=254 Identities=22% Similarity=0.244 Sum_probs=193.6
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||+||+|+..+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||++ ++
T Consensus 26 ~~~lG~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 104 (311)
T 3niz_A 26 LEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVIHSERCLTLVFEFME-KD 104 (311)
T ss_dssp EEEEEECSSCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEECCSSCEEEEEECCS-EE
T ss_pred hhhccCCCCeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEEccCCEEEEEEcCCC-CC
Confidence 468999999999999998899999999975422 234678899999999999999999999999999999999997 58
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 105 l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~------ 174 (311)
T 3niz_A 105 LKKVLDENKT----GLQDSQIKIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVR------ 174 (311)
T ss_dssp HHHHHHTCTT----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC------
T ss_pred HHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcc------
Confidence 8887765432 389999999999999999999999999999999999999999999999999987542211
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 175 ------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 224 (311)
T 3niz_A 175 ------------------------------SYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVT 224 (311)
T ss_dssp ---------------------------------CCCCCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ------------------------------cccCCcccCCcCCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCC
Confidence 1123358999999999876 568999999999999999999999996543
Q ss_pred cCCCCcchh------------chhHHHHHHHHhhhcCcc------chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVE------------DKNRAIRLADAAIRADFE------GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~------------~~~~~~~~~~~~~~~~~~------~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.......+. .........+... ..+. .......++.+|+.+||+.||++|||++|+++
T Consensus 225 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 300 (311)
T 3niz_A 225 DDDQLPKIFSILGTPNPREWPQVQELPLWKQRTF-QVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMN 300 (311)
T ss_dssp TTTHHHHHHHHHCCCCTTTSGGGTTSHHHHSCCC-CCCCCCCHHHHSTTCCHHHHHHHHHHSCSCTTTSCCHHHHHT
T ss_pred hHHHHHHHHHHHCCCChHHhhhhhccchhhhccc-ccccCCcHHHhCcccCHHHHHHHHHHcCCChhHCCCHHHHhc
Confidence 211100000 0000000000000 0000 00012356789999999999999999999987
No 66
>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7
Probab=100.00 E-value=6.1e-41 Score=363.83 Aligned_cols=260 Identities=26% Similarity=0.371 Sum_probs=207.1
Q ss_pred cceeccccCceEEEEEEeC------CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVLE------DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
..+.||+|+||.||+|+.. +++.||||+++.. .....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 51 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e 130 (343)
T 1luf_A 51 YVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFE 130 (343)
T ss_dssp EEEEEEECSSCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred eeeeeeecCCeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEccCCceEEEEe
Confidence 4578999999999999963 4589999999865 33445789999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCC-------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC
Q 003847 552 FVPNGSLANARYRKMGSS-------------------PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND 612 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~-------------------~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~ 612 (791)
|+++|+|.+++....... ...+++.+++.|+.||+.||+|||+.||+||||||+|||++.+
T Consensus 131 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~ 210 (343)
T 1luf_A 131 YMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGEN 210 (343)
T ss_dssp CCTTCBHHHHHHHTCC----------------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred cCCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEECCC
Confidence 999999999998743210 1359999999999999999999999999999999999999999
Q ss_pred CCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCc
Q 003847 613 MEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPK 692 (791)
Q Consensus 613 ~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~ 692 (791)
+.+||+|||+++......... ......||+.|+|||++.+..++.+
T Consensus 211 ~~~kl~Dfg~~~~~~~~~~~~----------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~ 256 (343)
T 1luf_A 211 MVVKIADFGLSRNIYSADYYK----------------------------------ADGNDAIPIRWMPPESIFYNRYTTE 256 (343)
T ss_dssp GCEEECCCSCHHHHTGGGCBC--------------------------------------CCBCGGGCCHHHHHHCCCCHH
T ss_pred CeEEEeecCCCcccccCcccc----------------------------------ccCCCcccceecChhhhccCCcCcc
Confidence 999999999998764221100 0112347889999999998899999
Q ss_pred hhhHHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 693 WDVYSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 693 sDvwSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
+||||||+++|||++ |+.||.+... ......+.+... .......+..+.+++.+||+.||++||++.
T Consensus 257 ~Di~slG~il~el~t~g~~p~~~~~~---------~~~~~~~~~~~~---~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ 324 (343)
T 1luf_A 257 SDVWAYGVVLWEIFSYGLQPYYGMAH---------EEVIYYVRDGNI---LACPENCPLELYNLMRLCWSKLPADRPSFC 324 (343)
T ss_dssp HHHHHHHHHHHHHHTTTCCTTTTSCH---------HHHHHHHHTTCC---CCCCTTCCHHHHHHHHHHTCSSGGGSCCHH
T ss_pred cccHHHHHHHHHHHhcCCCcCCCCCh---------HHHHHHHhCCCc---CCCCCCCCHHHHHHHHHHcccCcccCCCHH
Confidence 999999999999999 9999865311 011111111111 111222456789999999999999999999
Q ss_pred HHHHHhccCCCCC
Q 003847 772 EALQALEKIPSSP 784 (791)
Q Consensus 772 evl~~L~~i~~~~ 784 (791)
|+++.|+++....
T Consensus 325 ~~~~~L~~~~~~~ 337 (343)
T 1luf_A 325 SIHRILQRMCERA 337 (343)
T ss_dssp HHHHHHHHTTC--
T ss_pred HHHHHHHHHHhhh
Confidence 9999999987644
No 67
>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*
Probab=100.00 E-value=5e-41 Score=359.68 Aligned_cols=259 Identities=27% Similarity=0.336 Sum_probs=208.1
Q ss_pred hhcceeccccCceEEEEEEe------CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEE
Q 003847 477 KASAYILGASGSSIMYKAVL------EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII 549 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 549 (791)
+...+.||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++||||+++++++...+..++|
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv 104 (314)
T 2ivs_A 25 LVLGKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLI 104 (314)
T ss_dssp EEEEEEEEECSSSEEEEEEEETGGGCSSEEEEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEECSSSSCEEE
T ss_pred eeeeeeecccCCeeEEEEEEeccCcccCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCceeeEEEEEecCCceEEE
Confidence 34457899999999999985 34589999999764 344567899999999999999999999999999999999
Q ss_pred EeccCCCChhHHHHhhcCCC-------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec
Q 003847 550 YDFVPNGSLANARYRKMGSS-------------------PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG 610 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~-------------------~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~ 610 (791)
|||+++++|.+++....... ...+++.+++.++.||+.||+|||+.||+||||||+||+++
T Consensus 105 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dikp~NIli~ 184 (314)
T 2ivs_A 105 VEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVA 184 (314)
T ss_dssp EECCTTCBHHHHHHHTTTSTTEEC----------------CEECHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEE
T ss_pred EeecCCCCHHHHHHHHhhccCCcccccccccccccccccccCcCHHHHHHHHHHHHHHHHHHHHCCCcccccchheEEEc
Confidence 99999999999998754311 12389999999999999999999999999999999999999
Q ss_pred CCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCC
Q 003847 611 NDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPN 690 (791)
Q Consensus 611 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~ 690 (791)
.++.+||+|||+++......... ......||+.|+|||++.+..++
T Consensus 185 ~~~~~kl~Dfg~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~ 230 (314)
T 2ivs_A 185 EGRKMKISDFGLSRDVYEEDSYV----------------------------------KRSQGRIPVKWMAIESLFDHIYT 230 (314)
T ss_dssp TTTEEEECCCTTCEECTTTSCEE----------------------------------CSSCCCSCGGGCCHHHHHHCEEC
T ss_pred CCCCEEEccccccccccccccce----------------------------------eccCCCCcccccChhhhcCCCcC
Confidence 99999999999998764322110 01123478889999999988899
Q ss_pred CchhhHHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC
Q 003847 691 PKWDVYSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS 769 (791)
Q Consensus 691 ~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 769 (791)
.++||||||+++|||++ |+.||...... ............ ......+..+.+++.+||+.||++||+
T Consensus 231 ~~~Di~slG~il~el~t~g~~p~~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps 298 (314)
T 2ivs_A 231 TQSDVWSFGVLLWEIVTLGGNPYPGIPPE----------RLFNLLKTGHRM--ERPDNCSEEMYRLMLQCWKQEPDKRPV 298 (314)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCSSTTCCGG----------GHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred chhhHHHHHHHHHHHHhCCCCCCCCCCHH----------HHHHHhhcCCcC--CCCccCCHHHHHHHHHHccCChhhCcC
Confidence 99999999999999999 99998654211 111111111111 112224567899999999999999999
Q ss_pred HHHHHHHhccCC
Q 003847 770 MKEALQALEKIP 781 (791)
Q Consensus 770 ~~evl~~L~~i~ 781 (791)
+.|+++.|+++.
T Consensus 299 ~~~l~~~l~~~~ 310 (314)
T 2ivs_A 299 FADISKDLEKMM 310 (314)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999998764
No 68
>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*
Probab=100.00 E-value=4.5e-41 Score=362.44 Aligned_cols=267 Identities=24% Similarity=0.346 Sum_probs=208.6
Q ss_pred cceeccccCceEEEEEEe-----CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEc--cCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVL-----EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG--VDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lv~e 551 (791)
..+.||+|+||.||+|++ .+++.||||++........+.+.+|++++++++||||+++++++.. .+..++|||
T Consensus 27 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e 106 (327)
T 3lxl_A 27 YISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106 (327)
T ss_dssp EEEEEEEETTEEEEEEEECTTSSSCSEEEEEEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSSCEEEEEEE
T ss_pred hhhhccCCCCeEEEEEEeccCCCCcceEEEEEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEecCCCceEEEEEe
Confidence 357899999999999983 4689999999988777777889999999999999999999999874 456889999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++++|.+++..... .+++..++.|+.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 107 ~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 182 (327)
T 3lxl_A 107 YLPSGCLRDFLQRHRA----RLDASRLLLYSSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKD 182 (327)
T ss_dssp CCTTCBHHHHHHHHGG----GCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCS
T ss_pred ecCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCc
Confidence 9999999999987543 389999999999999999999999999999999999999999999999999987653321
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~p 711 (791)
... ......||..|+|||++.+..++.++||||||+++|||++|+.|
T Consensus 183 ~~~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~~p 229 (327)
T 3lxl_A 183 YYV---------------------------------VREPGQSPIFWYAPESLSDNIFSRQSDVWSFGVVLYELFTYCDK 229 (327)
T ss_dssp EEE---------------------------------CSSCCCSCGGGSCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCG
T ss_pred cce---------------------------------eeccCCccccccCHHHhccCCCChHHhHHHHHHHHHHHHhCCCC
Confidence 110 11123488899999999988899999999999999999999999
Q ss_pred hhccccCCCCc-----chhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 712 VVDELGQGNGL-----LVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 712 f~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
|.......... ................. .......+..+.+++.+||+.||++|||+.|+++.|+.+....
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~~~~ 305 (327)
T 3lxl_A 230 SCSPSAEFLRMMGCERDVPALSRLLELLEEGQR--LPAPPACPAEVHELMKLCWAPSPQDRPSFSALGPQLDMLWSGS 305 (327)
T ss_dssp GGSHHHHHHHHCC----CCHHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHC----
T ss_pred CccccchhhhhcccccccccHHHHHHHhhcccC--CCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhhh
Confidence 86532210000 00000111111111111 1122235567899999999999999999999999999885443
No 69
>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*
Probab=100.00 E-value=4.2e-41 Score=351.44 Aligned_cols=253 Identities=24% Similarity=0.389 Sum_probs=206.3
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...+.||+|+||.||++...+++.||||++...... .+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 11 ~~~~~lg~G~~g~V~~~~~~~~~~vaiK~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 89 (267)
T 3t9t_A 11 TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMS-EEDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGC 89 (267)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTTBC-HHHHHHHHHHHHTCCCTTBCCEEEEECSSSSCEEEECCCTTCB
T ss_pred eeeeEecCCCceeEEEEEecCCCeEEEEEccccCCC-HHHHHHHHHHHHhCCCCCEeeEEEEEccCCCeEEEEeCCCCCc
Confidence 345789999999999999888999999999875433 3678999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 90 L~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~----- 160 (267)
T 3t9t_A 90 LSDYLRTQRG----LFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT----- 160 (267)
T ss_dssp HHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHH-----
T ss_pred HHHHHhhCcc----cCCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccc-----
Confidence 9999876532 3899999999999999999999999999999999999999999999999999865421100
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~ 716 (791)
......||..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 161 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~ 210 (267)
T 3t9t_A 161 ------------------------------SSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRS 210 (267)
T ss_dssp ------------------------------STTSTTCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTCC
T ss_pred ------------------------------ccccccccccccChhhhcCCCccchhchhhhHHHHHHHhccCCCCCCCCC
Confidence 0112337788999999998899999999999999999999 888986531
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
.. .....+ ...... ..+......+.+++.+||+.||++||++.|+++.|+++..
T Consensus 211 ~~---------~~~~~i-~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~L~~l~~ 264 (267)
T 3t9t_A 211 NS---------EVVEDI-STGFRL--YKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAE 264 (267)
T ss_dssp HH---------HHHHHH-HTTCCC--CCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HH---------HHHHHH-hcCCcC--CCCccCcHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 10 011111 111111 1112245678899999999999999999999999998754
No 70
>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A
Probab=100.00 E-value=1.1e-40 Score=357.59 Aligned_cols=263 Identities=22% Similarity=0.267 Sum_probs=198.4
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.++||+|+||.||+|+ ..+++.||||++........+.+.+|++++.++ +||||+++++++.+.+..++||||+++++
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 97 (316)
T 2ac3_A 18 EDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEKMRGGS 97 (316)
T ss_dssp CCCCCCCSSEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTCB
T ss_pred CceecCCceEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEEcCCCCc
Confidence 4579999999999999 457999999999776555567899999999985 79999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC---eEEeccCcccccCCCCCCCc
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~---~kL~DFGla~~~~~~~~~~~ 634 (791)
|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++. +||+|||++...........
T Consensus 98 L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 172 (316)
T 2ac3_A 98 ILSHIHKRR-----HFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSP 172 (316)
T ss_dssp HHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC----------
T ss_pred HHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccc
Confidence 999998764 3899999999999999999999999999999999999998766 99999999886542211100
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-----CCCCCchhhHHHHHHHHHHHhCC
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-----IKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----~~~~~~sDvwSlGvil~elltG~ 709 (791)
. ........+||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 173 ~-----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~ 223 (316)
T 2ac3_A 173 I-----------------------------STPELLTPCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGY 223 (316)
T ss_dssp --------------------------------------CCSGGGCCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSS
T ss_pred c-----------------------------cccccccccCCcCccChHHhhcccccccCCCcccccHhHHHHHHHHHHCC
Confidence 0 0011223469999999999875 55789999999999999999999
Q ss_pred cchhccccCCCCcchhc--hhHHHHHHHHhhhcCccchH----HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 710 VIVVDELGQGNGLLVED--KNRAIRLADAAIRADFEGKE----EALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.||.............. ......+...........+. .....+.+|+.+||+.||++|||+.|+++.
T Consensus 224 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~h 296 (316)
T 2ac3_A 224 PPFVGRCGSDCGWDRGEACPACQNMLFESIQEGKYEFPDKDWAHISCAAKDLISKLLVRDAKQRLSAAQVLQH 296 (316)
T ss_dssp CSCCCCCCSCSCC----CCHHHHHHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHHS
T ss_pred CCCcccccccccccccccchhHHHHHHHHHhccCcccCchhcccCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 99976433211111000 00011122222222222221 134678999999999999999999999983
No 71
>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7
Probab=100.00 E-value=5e-41 Score=369.27 Aligned_cols=248 Identities=19% Similarity=0.235 Sum_probs=201.2
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||+|.. .+|+.||+|++..........+.+|++++++++||||+++++++.+.+..++||||+++|+
T Consensus 55 i~~~LG~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~lv~E~~~gg~ 134 (387)
T 1kob_A 55 ILEELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAFEDKYEMVLILEFLSGGE 134 (387)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEEECSSEEEEEEECCCCCB
T ss_pred EEEEEecCCCEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEEEeCCEEEEEEEcCCCCc
Confidence 356899999999999995 4689999999987665556789999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC--CCCeEEeccCcccccCCCCCCCcC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN--DMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~--~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|.+++..... .+++..+..++.||+.||+|||+.||+||||||+|||++. ++.+||+|||+++.......
T Consensus 135 L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~---- 206 (387)
T 1kob_A 135 LFDRIAAEDY----KMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEI---- 206 (387)
T ss_dssp HHHHTTCTTC----CBCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSC----
T ss_pred HHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcc----
Confidence 9998765432 3899999999999999999999999999999999999974 57799999999987643211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+.
T Consensus 207 ---------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~ 253 (387)
T 1kob_A 207 ---------------------------------VKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSPFAGE 253 (387)
T ss_dssp ---------------------------------EEEECSSGGGCCHHHHTTCCBCHHHHHHHHHHHHHHHHHSCCSSCCS
T ss_pred ---------------------------------eeeeccCCCccCchhccCCCCCCcccEeeHhHHHHHHHhCCCCCCCC
Confidence 11234899999999999989999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. ......+...............+..+.+|+.+||+.||++|||+.|+++.
T Consensus 254 ~~---------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 305 (387)
T 1kob_A 254 DD---------LETLQNVKRCDWEFDEDAFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEH 305 (387)
T ss_dssp SH---------HHHHHHHHHCCCCCCSSTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHTS
T ss_pred CH---------HHHHHHHHhCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhhC
Confidence 21 01111111111100111112245678899999999999999999999874
No 72
>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*
Probab=100.00 E-value=2.4e-41 Score=369.56 Aligned_cols=258 Identities=22% Similarity=0.293 Sum_probs=204.5
Q ss_pred cceeccccCceEEEEEEe------CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCc-eEEE
Q 003847 479 SAYILGASGSSIMYKAVL------EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDE-KLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~-~~lv 549 (791)
..+.||+|+||.||+|+. .+++.||||+++.. .....+.+.+|+++++++ +||||+++++++...+. .++|
T Consensus 26 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~~~~~~~~iv 105 (359)
T 3vhe_A 26 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 105 (359)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSTTSCCEEE
T ss_pred eceeecCCCCceEEEEEeccccccccceEEEEEEecCcCCHHHHHHHHHHHHHHHhhcCCcceeeeeeeeecCCCceEEE
Confidence 457899999999999973 34689999999764 334456799999999999 79999999999987655 8999
Q ss_pred EeccCCCChhHHHHhhcCCC------------------------------------------------------------
Q 003847 550 YDFVPNGSLANARYRKMGSS------------------------------------------------------------ 569 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~------------------------------------------------------------ 569 (791)
|||+++|+|.+++.......
T Consensus 106 ~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (359)
T 3vhe_A 106 VEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQGKDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDL 185 (359)
T ss_dssp EECCTTEEHHHHHHTTTTSBCSCC------------------------------------------------------CT
T ss_pred EEecCCCcHHHHHHhccccccccccccchhhcccccccccchhhhccccccCccccccccccccccccchhhhcccccch
Confidence 99999999999998754310
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccc
Q 003847 570 -PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRST 648 (791)
Q Consensus 570 -~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~ 648 (791)
...+++..++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.........
T Consensus 186 ~~~~l~~~~~~~~~~ql~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~--------------- 250 (359)
T 3vhe_A 186 YKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYV--------------- 250 (359)
T ss_dssp TTTCBCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTSCTTCE---------------
T ss_pred hccccCHHHHHHHHHHHHHHHHHHHHCCcccCCCChhhEEEcCCCcEEEEeccceeeecccccch---------------
Confidence 1128999999999999999999999999999999999999999999999999998654322110
Q ss_pred cccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccccCCCCcchhch
Q 003847 649 ASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELGQGNGLLVEDK 727 (791)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~ 727 (791)
......||+.|+|||++.+..++.++|||||||++|||+| |+.||......
T Consensus 251 -------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--------- 302 (359)
T 3vhe_A 251 -------------------RKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID--------- 302 (359)
T ss_dssp -------------------EC--CEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHTTTSCCSSTTCCCS---------
T ss_pred -------------------hccccCCCceeEChhhhcCCCCCchhhhhhHHHHHHHHHhcCCCCCCccchh---------
Confidence 1123348899999999999999999999999999999998 99999653211
Q ss_pred hHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 728 NRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 728 ~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
............. ..+......+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 303 ~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~~~ 354 (359)
T 3vhe_A 303 EEFCRRLKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLL 354 (359)
T ss_dssp HHHHHHHHHTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHH
Confidence 1111112211111 112224567889999999999999999999999998764
No 73
>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}
Probab=100.00 E-value=4.2e-41 Score=368.37 Aligned_cols=256 Identities=22% Similarity=0.314 Sum_probs=204.2
Q ss_pred ceeccccCceEEEEEEeC------CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLE------DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.+.||+|+||.||+|+.. +++.||||+++.. .......+.+|+.++++++||||+++++++...+..++||||
T Consensus 76 ~~~LG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~ 155 (367)
T 3l9p_A 76 IRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLEL 155 (367)
T ss_dssp EEECCCCSSSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEEC
T ss_pred eeEeeeCCCEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCCEEEEEe
Confidence 468999999999999843 4678999999764 344456789999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCC--CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC---CeEEeccCcccccC
Q 003847 553 VPNGSLANARYRKMGS--SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM---EPKIGDFGLERLVT 627 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~--~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~---~~kL~DFGla~~~~ 627 (791)
+++|+|.+++...... ....+++.+++.|+.||+.||+|||++||+||||||+|||++.++ .+||+|||+++.+.
T Consensus 156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~~ 235 (367)
T 3l9p_A 156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIY 235 (367)
T ss_dssp CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHH
T ss_pred CCCCCHHHHHHhhccccCccccccHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCccccccc
Confidence 9999999999876532 123489999999999999999999999999999999999999554 59999999998653
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt 707 (791)
...... ......||+.|+|||++.+..++.++|||||||++|||++
T Consensus 236 ~~~~~~----------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DvwslG~il~ellt 281 (367)
T 3l9p_A 236 RAGYYR----------------------------------KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281 (367)
T ss_dssp HHSSCT----------------------------------TCCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHT
T ss_pred cccccc----------------------------------cCCCcCCcccEECHHHhcCCCCCcHHHHHHHHHHHHHHHh
Confidence 221100 1112347889999999999899999999999999999998
Q ss_pred -CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 708 -GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 708 -G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
|+.||..... ........... ........+..+.+|+.+||+.||++|||+.||++.|+.+.
T Consensus 282 ~g~~pf~~~~~----------~~~~~~i~~~~--~~~~~~~~~~~l~~li~~~l~~dP~~Rps~~eil~~l~~~~ 344 (367)
T 3l9p_A 282 LGYMPYPSKSN----------QEVLEFVTSGG--RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 344 (367)
T ss_dssp TSCCSSTTCCH----------HHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCCCCCH----------HHHHHHHHcCC--CCCCCccCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHHh
Confidence 9999865321 11111111111 11122234567889999999999999999999999997753
No 74
>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...
Probab=100.00 E-value=2.2e-41 Score=364.91 Aligned_cols=253 Identities=21% Similarity=0.328 Sum_probs=197.4
Q ss_pred cceeccccCceEEEEEEe-CCCc----EEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVL-EDGT----ALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~----~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
..+.||+|+||.||+|+. .+++ .||+|.+... .....+.+.+|++++++++||||+++++++... ..++|+||
T Consensus 19 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~-~~~~v~e~ 97 (327)
T 3poz_A 19 KIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQL 97 (327)
T ss_dssp EEEEEEEETTEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEESS-SEEEEEEC
T ss_pred cceEEeeCCCeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecC-CeEEEEEe
Confidence 346899999999999994 3444 4688888653 334457899999999999999999999999875 47899999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++|+|.+++..... .+++..++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++........
T Consensus 98 ~~~g~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~ 173 (327)
T 3poz_A 98 MPFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKE 173 (327)
T ss_dssp CTTCBHHHHHHHSTT----SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-
T ss_pred cCCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCccc
Confidence 999999999887543 3899999999999999999999999999999999999999999999999999876533211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~p 711 (791)
. ......||+.|+|||++.+..++.++|||||||++|||+| |+.|
T Consensus 174 ~----------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 219 (327)
T 3poz_A 174 Y----------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 219 (327)
T ss_dssp ----------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred c----------------------------------cccCCCccccccChHHhccCCCCchhhhhhhHHHHHHHHhcCCCC
Confidence 1 1112347889999999999999999999999999999999 9999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
|...... ........... ..........+.+++.+||+.||++||++.|+++.|+++..
T Consensus 220 ~~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~l~~~~~ 278 (327)
T 3poz_A 220 YDGIPAS----------EISSILEKGER--LPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMAR 278 (327)
T ss_dssp TTTCCGG----------GHHHHHHTTCC--CCCCTTBCHHHHHHHHHHTCSCGGGSCCHHHHHHHHHHHHT
T ss_pred ccCCCHH----------HHHHHHHcCCC--CCCCccCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHh
Confidence 9653211 11222221111 11222245678899999999999999999999999987643
No 75
>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A
Probab=100.00 E-value=3.6e-41 Score=362.68 Aligned_cols=247 Identities=23% Similarity=0.303 Sum_probs=182.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|.. .+++.||||++... ....+.+|+.+++++. ||||+++++++.+.+..|+||||+++|+
T Consensus 16 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~---~~~~~~~e~~~l~~l~~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 92 (325)
T 3kn6_A 16 DKPLGEGSFSICRKCVHKKSNQAFAVKIISKR---MEANTQKEITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGE 92 (325)
T ss_dssp SCCSEEETTEEEEEEEETTTCCEEEEEEEEGG---GHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred CCccccCCCeEEEEEEECCCCCEEEEEEEChh---hhhhHHHHHHHHHHhcCCCCeeEEEEEEEcCCEEEEEEEccCCCc
Confidence 46899999999999995 46899999999654 3367789999999997 9999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC---CeEEeccCcccccCCCCCCCc
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM---EPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~---~~kL~DFGla~~~~~~~~~~~ 634 (791)
|.+++.... .+++.++..|+.||+.||+|||+.||+||||||+|||++.++ .+||+|||+++.......
T Consensus 93 L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~--- 164 (325)
T 3kn6_A 93 LFERIKKKK-----HFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ--- 164 (325)
T ss_dssp HHHHHHHCS-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC------
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCC---
Confidence 999987753 399999999999999999999999999999999999998765 799999999986543211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 165 ---------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~ 211 (325)
T 3kn6_A 165 ---------------------------------PLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQS 211 (325)
T ss_dssp ----------------------------------------------------CCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred ---------------------------------cccccCCCcCccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCC
Confidence 11234589999999999999999999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
......... ..++......+.+... ...+..+.+|+.+||+.||++|||+.|+++.
T Consensus 212 ~~~~~~~~~------~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~ell~h 271 (325)
T 3kn6_A 212 HDRSLTCTS------AVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRLKMSGLRYN 271 (325)
T ss_dssp ------CCC------HHHHHHHHTTTCCCCCSHHHHTSCHHHHHHHHHHHCCCTTTCCCTTTSTTC
T ss_pred Ccccccccc------HHHHHHHHHcCCCCCCcccccCCCHHHHHHHHHHCCCChhHCCCHHHHhcC
Confidence 432211111 1222222222222211 2245678999999999999999999998743
No 76
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Probab=100.00 E-value=5.5e-41 Score=377.75 Aligned_cols=256 Identities=23% Similarity=0.349 Sum_probs=203.6
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
..+.||+|+||.||+|...++..||||+++.... ..+++.+|+++|++++||||+++++++.+ +..++||||+++|+|
T Consensus 188 ~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hp~iv~~~~~~~~-~~~~iv~e~~~~gsL 265 (452)
T 1fmk_A 188 LEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGSL 265 (452)
T ss_dssp EEEEEEECSSCEEEEEEETTTEEEEEEECCTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTCBH
T ss_pred eeeeecCCCCeEEEEEEECCCceEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEcC-CceEEEehhhcCCCH
Confidence 4568999999999999988888999999986543 24689999999999999999999999866 778999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++...... .+++..+..++.||+.||+|||++||+||||||+|||++.++.+||+|||+++........
T Consensus 266 ~~~l~~~~~~---~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~------ 336 (452)
T 1fmk_A 266 LDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT------ 336 (452)
T ss_dssp HHHHSHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------
T ss_pred HHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCcee------
Confidence 9999754322 3899999999999999999999999999999999999999999999999999876432111
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcccc
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDELG 717 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~~ 717 (791)
......++..|+|||++.+..++.++|||||||++|||++ |+.||.+...
T Consensus 337 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~~ 387 (452)
T 1fmk_A 337 -----------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVN 387 (452)
T ss_dssp -----------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTTCCH
T ss_pred -----------------------------cccCCcccccccCHhHHhcCCCCccccHHhHHHHHHHHHhCCCCCCCCCCH
Confidence 0112236788999999998899999999999999999999 8999865311
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCCCC
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSPSP 786 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~p 786 (791)
. .....+.... ..+.+...+..+.+++.+||+.||++|||++++++.|+.+.....|
T Consensus 388 ~----------~~~~~i~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~Rpt~~~l~~~L~~~~~~~~~ 444 (452)
T 1fmk_A 388 R----------EVLDQVERGY--RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 444 (452)
T ss_dssp H----------HHHHHHHTTC--CCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTTTSCSCC
T ss_pred H----------HHHHHHHcCC--CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHhccCCc
Confidence 0 1111111111 1122223566789999999999999999999999999998765543
No 77
>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*
Probab=100.00 E-value=8.2e-41 Score=357.85 Aligned_cols=260 Identities=26% Similarity=0.335 Sum_probs=208.3
Q ss_pred hhcceeccccCceEEEEEEe------CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEE
Q 003847 477 KASAYILGASGSSIMYKAVL------EDGTALAVRRIGENS-VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 548 (791)
+...+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++...+..++
T Consensus 25 y~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~~~~l 104 (313)
T 1t46_A 25 LSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLV 104 (313)
T ss_dssp EEEEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred hhHHHhhCccCCcceEEEEEeeccccchhhhhHHHhcCcchhHHHHHHHHHHHHHHhhcccCCCeeeEEEEEecCCCcEE
Confidence 34457899999999999984 357899999997653 34457899999999999 99999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcCC-------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCe
Q 003847 549 IYDFVPNGSLANARYRKMGS-------------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~-------------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~ 615 (791)
||||+++|+|.+++...... ....+++..++.++.|++.||+|||+.||+||||||+||+++.++.+
T Consensus 105 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~ 184 (313)
T 1t46_A 105 ITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNILLTHGRIT 184 (313)
T ss_dssp EEECCTTEEHHHHHHHTTTTC--------------CCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEE
T ss_pred EEecCCCCCHHHHHHhcccccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHCCeecCCCccceEEEcCCCCE
Confidence 99999999999999875421 11248999999999999999999999999999999999999999999
Q ss_pred EEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhh
Q 003847 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDV 695 (791)
Q Consensus 616 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDv 695 (791)
||+|||+++......... ......||+.|+|||++.+..++.++||
T Consensus 185 kl~Dfg~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di 230 (313)
T 1t46_A 185 KICDFGLARDIKNDSNYV----------------------------------VKGNARLPVKWMAPESIFNCVYTFESDV 230 (313)
T ss_dssp EECCCGGGSCTTSCTTSE----------------------------------ECSSSEECGGGCCHHHHHHCCCCHHHHH
T ss_pred EEccccccccccccccce----------------------------------eccCCCCcceeeChHHhcCCCCChHHHH
Confidence 999999998765332110 0112347888999999998899999999
Q ss_pred HHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 696 YSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 696 wSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
||||+++|||++ |+.||...... ............... ....+..+.+++.+||+.||++|||+.|++
T Consensus 231 ~slG~il~ellt~g~~p~~~~~~~---------~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~ell 299 (313)
T 1t46_A 231 WSYGIFLWELFSLGSSPYPGMPVD---------SKFYKMIKEGFRMLS--PEHAPAEMYDIMKTCWDADPLKRPTFKQIV 299 (313)
T ss_dssp HHHHHHHHHHHTTTCCSSTTCCSS---------HHHHHHHHHTCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCCcccch---------hHHHHHhccCCCCCC--cccCCHHHHHHHHHHcCCCchhCcCHHHHH
Confidence 999999999999 99998653211 111222222221111 122456789999999999999999999999
Q ss_pred HHhccCC
Q 003847 775 QALEKIP 781 (791)
Q Consensus 775 ~~L~~i~ 781 (791)
+.|+++.
T Consensus 300 ~~L~~~~ 306 (313)
T 1t46_A 300 QLIEKQI 306 (313)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998764
No 78
>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*
Probab=100.00 E-value=7.7e-41 Score=352.50 Aligned_cols=253 Identities=22% Similarity=0.274 Sum_probs=193.5
Q ss_pred hhcceeccccCceEEEEEEeC----CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 477 KASAYILGASGSSIMYKAVLE----DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
+...+.||+|+||.||+|... .+..||||++... .....+.+.+|+.++++++||||+++++++ ..+..++|||
T Consensus 17 y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e 95 (281)
T 1mp8_A 17 IELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI-TENPVWIIME 95 (281)
T ss_dssp EEEEEEEEECSSSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE-CSSSCEEEEE
T ss_pred eEEEeEeeecCCeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE-ccCccEEEEe
Confidence 344678999999999999854 2567999998764 334456799999999999999999999998 4567899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++++|.+++..... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 96 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~ 171 (281)
T 1mp8_A 96 LCTLGELRSFLQVRKY----SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 171 (281)
T ss_dssp CCTTEEHHHHHHHTTT----TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------------
T ss_pred cCCCCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccc
Confidence 9999999999876532 389999999999999999999999999999999999999999999999999987643211
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~ 710 (791)
. ......+|+.|+|||++.+..++.++||||||+++|||++ |+.
T Consensus 172 ~-----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~ 216 (281)
T 1mp8_A 172 Y-----------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 216 (281)
T ss_dssp ------------------------------------------CCGGGCCHHHHHHCCCSHHHHHHHHHHHHHHHHTTSCC
T ss_pred c-----------------------------------ccccCCCcccccChhhcccCCCCCccCchHHHHHHHHHHhcCCC
Confidence 0 0112236788999999998899999999999999999997 888
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
||.+.... .....+.... ..+.....+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 217 pf~~~~~~---------~~~~~i~~~~---~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 275 (281)
T 1mp8_A 217 PFQGVKNN---------DVIGRIENGE---RLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 275 (281)
T ss_dssp TTTTCCGG---------GHHHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCcCCHH---------HHHHHHHcCC---CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 98653211 1111111111 11112234567889999999999999999999999998763
No 79
>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*
Probab=100.00 E-value=1.7e-40 Score=350.86 Aligned_cols=247 Identities=25% Similarity=0.422 Sum_probs=196.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchh-------hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVD-------RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
.+.||+|+||.||+|+. .+++.||||++...... ..+.+.+|++++++++||||+++++++.+.. ++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~--~lv~e 101 (287)
T 4f0f_A 24 EKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPP--RMVME 101 (287)
T ss_dssp EEECCCCSSSCEEEEEETTTCCEEEEEECCCCTTTCCHHHHCCSHHHHHHHHHHTTCCCTTBCCEEEEETTTT--EEEEE
T ss_pred hhccccCCceeEEEEEEcCCceEEEEEEeeccccccchhHHHHHHHHHHHHHHHHhCCCCCchhhheeecCCC--eEEEE
Confidence 46899999999999995 57899999999653221 1267899999999999999999999986554 79999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CeecCCCCCCeEecCCCC-----eEEeccCccc
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK--HVHGNLKPRNVLLGNDME-----PKIGDFGLER 624 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~--ivHrDlkp~NILl~~~~~-----~kL~DFGla~ 624 (791)
|+++|+|.+++..... .+++..++.++.|++.||+|||+.| |+||||||+||+++.++. +||+|||+++
T Consensus 102 ~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~l~~~l~~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~ 177 (287)
T 4f0f_A 102 FVPCGDLYHRLLDKAH----PIKWSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ 177 (287)
T ss_dssp CCTTCBHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCB
T ss_pred ecCCCCHHHHHhcccC----CccHHHHHHHHHHHHHHHHHHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccc
Confidence 9999999998876532 4999999999999999999999999 999999999999988776 9999999987
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc--CCCCCCchhhHHHHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR--SIKPNPKWDVYSFGVIL 702 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~--~~~~~~~sDvwSlGvil 702 (791)
..... .....||+.|+|||++. ...++.++|||||||++
T Consensus 178 ~~~~~---------------------------------------~~~~~g~~~y~aPE~~~~~~~~~~~~~Di~slG~~l 218 (287)
T 4f0f_A 178 QSVHS---------------------------------------VSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMIL 218 (287)
T ss_dssp CCSSC---------------------------------------EECCCCCCTTSCGGGSSCSSCEECHHHHHHHHHHHH
T ss_pred ccccc---------------------------------------ccccCCCccccCchhhccCCCCcCchhhHHHHHHHH
Confidence 43321 11234899999999984 45678999999999999
Q ss_pred HHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 703 LELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 703 ~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
|||++|+.||...... ................. ....+..+.+++.+||+.||++|||++|+++.|+++
T Consensus 219 ~~l~~g~~pf~~~~~~-------~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 287 (287)
T 4f0f_A 219 YTILTGEGPFDEYSYG-------KIKFINMIREEGLRPTI--PEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELSEL 287 (287)
T ss_dssp HHHHHSSCTTTTCCCC-------HHHHHHHHHHSCCCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTC
T ss_pred HHHHcCCCCCcccccc-------HHHHHHHHhccCCCCCC--CcccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhC
Confidence 9999999999653211 01011111111111111 223556789999999999999999999999999875
No 80
>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}
Probab=100.00 E-value=7.1e-41 Score=360.20 Aligned_cols=259 Identities=22% Similarity=0.351 Sum_probs=193.8
Q ss_pred hcceeccccCceEEEEEEeCC-C---cEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCce-----
Q 003847 478 ASAYILGASGSSIMYKAVLED-G---TALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK----- 546 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~-g---~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~----- 546 (791)
...+.||+|+||.||+|+... + ..||||+++.. .....+.+.+|++++++++||||+++++++...+..
T Consensus 26 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~ 105 (323)
T 3qup_A 26 TLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPI 105 (323)
T ss_dssp EEEEEEEEETTEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC-------C
T ss_pred EEeceecccCCeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccccccCCCc
Confidence 345789999999999999543 3 28999999764 344567899999999999999999999999887655
Q ss_pred -EEEEeccCCCChhHHHHhhcCC-CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 547 -LIIYDFVPNGSLANARYRKMGS-SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 547 -~lv~e~~~~gsL~~~l~~~~~~-~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
++||||+++|+|.+++...... ....+++..++.|+.|++.||+|||+.||+||||||+|||++.++.+||+|||+++
T Consensus 106 ~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~ 185 (323)
T 3qup_A 106 PMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSR 185 (323)
T ss_dssp EEEEEECCTTCBHHHHHHHHHC---CCCCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC--
T ss_pred cEEEEEeccCCcHHHHHHhhhccccccccCHHHHHHHHHHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeeccccc
Confidence 9999999999999998765432 22248999999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLE 704 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~e 704 (791)
......... ......+++.|+|||++.+..++.++|||||||++||
T Consensus 186 ~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e 231 (323)
T 3qup_A 186 KIYSGDYYR----------------------------------QGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWE 231 (323)
T ss_dssp -------------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHH
T ss_pred ccccccccc----------------------------------ccccccCcccccCchhhcCCCCCCccchhhHHHHHHH
Confidence 764322110 0112236788999999999999999999999999999
Q ss_pred HHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 705 LLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 705 llt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
|++ |+.||.+.... .....+.... ........+..+.+++.+||+.||++|||+.++++.|+++..
T Consensus 232 ll~~g~~p~~~~~~~---------~~~~~~~~~~---~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~l~ 298 (323)
T 3qup_A 232 IMTRGQTPYAGIENA---------EIYNYLIGGN---RLKQPPECMEEVYDLMYQCWSADPKQRPSFTCLRMELENILG 298 (323)
T ss_dssp HHTTSCCTTTTCCGG---------GHHHHHHTTC---CCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHhCCCCCccccChH---------HHHHHHhcCC---CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHH
Confidence 999 88898653211 1111111111 111222345678999999999999999999999999988643
No 81
>3lb7_A RAF proto-oncogene serine/threonine-protein kinas; kinase domain, alternative splicing, ATP-binding, disease MU kinase, metal-binding; 4.00A {Homo sapiens} PDB: 3omv_A*
Probab=100.00 E-value=1.5e-40 Score=354.97 Aligned_cols=258 Identities=23% Similarity=0.363 Sum_probs=199.7
Q ss_pred hhcceeccccCceEEEEEEeCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 477 KASAYILGASGSSIMYKAVLEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
+.....||+|+||.||+|+.. ..+|+|+++.. .....+.+.+|++++++++||||+++++++. .+..++||||++
T Consensus 38 ~~~~~~lG~G~~g~Vy~~~~~--~~~avk~~k~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-~~~~~lv~e~~~ 114 (307)
T 3lb7_A 38 VMLSTRIGSGSFGTVYKGKWH--GDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMT-KDNLAIVTQWCE 114 (307)
T ss_dssp CCEEEEEEECSSCEEEEEESS--SEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEC-SSSCEEEEECCS
T ss_pred eEEEeEecCCCCeEEEEEEEC--CEEEEEEEecCCCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEc-cCcEEEEEecCC
Confidence 344578999999999999864 46899988753 3445578999999999999999999999764 566899999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++..... .+++.++..|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++........
T Consensus 115 ~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DFg~a~~~~~~~~~-- 188 (307)
T 3lb7_A 115 GSSLYKHLHVQET----KFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGS-- 188 (307)
T ss_dssp SCBHHHHHHTSCC----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCSSSEEECTTSCEEECCCCSSCC---------
T ss_pred CCcHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCCEeeCCCChhhEEEcCCCCEEEccCCCceeccccccc--
Confidence 9999999875432 4999999999999999999999999999999999999999999999999999764321110
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.......||+.|+|||++. +..++.++|||||||++|||++|+.|
T Consensus 189 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~elltg~~P 236 (307)
T 3lb7_A 189 --------------------------------QQVEQPTGSVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236 (307)
T ss_dssp -------------------------------------CCCCTTSCCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCT
T ss_pred --------------------------------ccccCCCCCcceECcceeeccCCCCCCchhhHHHHHHHHHHHHhCCCC
Confidence 0112345999999999986 56788999999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhh-hcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAI-RADF-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
|..... ............ .... ......+..+.+++.+||+.||++||++.|+++.|+.+....
T Consensus 237 f~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~il~~l~~l~~~~ 302 (307)
T 3lb7_A 237 YSHINN---------RDQIIFMVGRGYASPDLSKLYKNCPKAMKRLVADCVKKVKEERPLFPQILSSIELLQHSL 302 (307)
T ss_dssp TTTCCC---------HHHHHHHHHHTCCCCCSTTSCSSSCHHHHHHHHHHSCSSSTTSCCHHHHHHHHHHHHTTC
T ss_pred CccCCc---------HHHHHHHHhcCCCCcchhhhhcCCcHHHHHHHHHHhhCChhhCcCHHHHHHHHHHHHhhc
Confidence 965321 111111111111 1110 011124567889999999999999999999999998876554
No 82
>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*
Probab=100.00 E-value=4.2e-41 Score=361.80 Aligned_cols=248 Identities=20% Similarity=0.264 Sum_probs=196.6
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++||||+++++++.+.+..++||||+++|+
T Consensus 12 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~lv~e~~~~~~ 91 (323)
T 3tki_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (323)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCTTEE
T ss_pred eeEEecCCCEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEEcCCCCc
Confidence 468999999999999954 78999999986542 2234678899999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++.... .+++.+++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+......
T Consensus 92 L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~----- 161 (323)
T 3tki_A 92 LFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE----- 161 (323)
T ss_dssp GGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE-----
T ss_pred HHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcc-----
Confidence 999876543 3899999999999999999999999999999999999999999999999999865422110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......+||+.|+|||++.+..+ +.++|||||||++|||++|+.||....
T Consensus 162 -----------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~ 212 (323)
T 3tki_A 162 -----------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (323)
T ss_dssp -----------------------------CCBCSCCSCGGGSCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSC
T ss_pred -----------------------------cccCCCccCcCccCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence 01123469999999999987765 779999999999999999999996532
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
... .......... ............+.+|+.+||+.||++|||+.|+++.
T Consensus 213 ~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eil~h 262 (323)
T 3tki_A 213 DSC--------QEYSDWKEKK--TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKKD 262 (323)
T ss_dssp TTS--------HHHHHHHTTC--TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTTC
T ss_pred hHH--------HHHHHHhccc--ccCCccccCCHHHHHHHHHHccCChhhCcCHHHHhhC
Confidence 210 0111111111 1111112245677899999999999999999999874
No 83
>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*
Probab=100.00 E-value=5.9e-41 Score=357.09 Aligned_cols=265 Identities=23% Similarity=0.331 Sum_probs=203.3
Q ss_pred cceeccccCceEEEEEEe-----CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEE
Q 003847 479 SAYILGASGSSIMYKAVL-----EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~ 550 (791)
..+.||+|+||.||+|++ .+++.||||++... .....+.+.+|++++++++||||+++++++... ...++||
T Consensus 25 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~ 104 (302)
T 4e5w_A 25 RIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIM 104 (302)
T ss_dssp EEEEEEECSSEEEEEEEECTTSSSCSEEEEEEEEC-----CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---CCEEEEE
T ss_pred hhhccCCCCceEEEEEEEccccCccCeEEEEEEecccccchhHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCceEEEEE
Confidence 356899999999999983 46899999999754 333457899999999999999999999999877 6689999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++++|.+++..... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 105 e~~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~ 180 (302)
T 4e5w_A 105 EFLPSGSLKEYLPKNKN----KINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDK 180 (302)
T ss_dssp ECCTTCBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTC
T ss_pred EeCCCCcHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCC
Confidence 99999999999976543 38999999999999999999999999999999999999999999999999998765332
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.... ......||..|+|||++.+..++.++||||||+++|||++|+.
T Consensus 181 ~~~~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 227 (302)
T 4e5w_A 181 EYYT---------------------------------VKDDRDSPVFWYAPECLMQSKFYIASDVWSFGVTLHELLTYCD 227 (302)
T ss_dssp CEEE---------------------------------CCCCTTCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTC
T ss_pred ccee---------------------------------ccCCCCCCccccCCeeecCCCCCcchhHHHHHHHHHHHHHccC
Confidence 1100 1123348889999999998889999999999999999999999
Q ss_pred chhccccCCCCc--chhchhHHHHHHHHhhhc-CccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 711 IVVDELGQGNGL--LVEDKNRAIRLADAAIRA-DFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 711 pf~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
|+.......... ..........+....... ..+.....+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 228 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~l 300 (302)
T 4e5w_A 228 SDSSPMALFLKMIGPTHGQMTVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLIEGFEAL 300 (302)
T ss_dssp GGGSHHHHHHHHHCSCCGGGHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCcchhhHHhhccCCcccccCHHHHHHHHhccCCCCCCCCCCHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHH
Confidence 864431100000 000001111111111111 1112223456789999999999999999999999999875
No 84
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A
Probab=100.00 E-value=1.5e-40 Score=374.03 Aligned_cols=247 Identities=23% Similarity=0.349 Sum_probs=202.6
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccC-ceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD-EKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~-~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||+|... |+.||||+++... ..+.+.+|+++|++++||||+++++++...+ ..++||||+++|+
T Consensus 197 ~~~~lG~G~fg~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~iv~e~~~~g~ 273 (450)
T 1k9a_A 197 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 273 (450)
T ss_dssp EEEEEEECSSEEEEEEEET-TEEEEEEEESSCT--TSHHHHHHHHHHHTCCCTTBCCEEEEEECTTSCEEEEEECCTTCB
T ss_pred EEeeecCcCCeeEEEEEec-CCeEEEEEeCCch--HHHHHHHHHHHHHhccCCCEEEEEEEEEcCCCceEEEEEecCCCc
Confidence 3578999999999999975 7899999998654 3478999999999999999999999987765 7899999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++...... .+++..++.++.||+.||+|||+++|+||||||+|||++.++.+||+|||+++......
T Consensus 274 L~~~l~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~------- 343 (450)
T 1k9a_A 274 LVDYLRSRGRS---VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ------- 343 (450)
T ss_dssp HHHHHHHHCTT---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC----------
T ss_pred HHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccc-------
Confidence 99999876432 37999999999999999999999999999999999999999999999999998543211
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~ 716 (791)
....++..|+|||++.+..++.++|||||||++|||++ |+.||....
T Consensus 344 --------------------------------~~~~~~~~y~aPE~~~~~~~~~~sDvwslG~~l~el~t~g~~P~~~~~ 391 (450)
T 1k9a_A 344 --------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 391 (450)
T ss_dssp -----------------------------------CCCTTTSCHHHHHSSCCCHHHHHHHHHHHHHHHHTTTCCSSTTSC
T ss_pred --------------------------------cCCCCCcceeCHHHhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCC
Confidence 01136778999999999999999999999999999998 999996532
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
... ....+..... .+.+...+..+.+++.+||+.||++|||+.++++.|+.|..
T Consensus 392 ~~~----------~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~dp~~Rpt~~~l~~~L~~i~~ 445 (450)
T 1k9a_A 392 LKD----------VVPRVEKGYK--MDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIRT 445 (450)
T ss_dssp TTT----------HHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred HHH----------HHHHHHcCCC--CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHH
Confidence 211 1111111111 12222356788999999999999999999999999998754
No 85
>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*
Probab=100.00 E-value=3.2e-41 Score=372.87 Aligned_cols=248 Identities=17% Similarity=0.196 Sum_probs=199.7
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
...+||+|+||.||+|+.. +++.||+|++.+... ...+.+.+|+++++.++||||+++++++.+.+..|+||||++
T Consensus 73 ~~~~LG~G~fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~~~~~~~~lV~E~~~ 152 (410)
T 3v8s_A 73 VVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMP 152 (410)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEcCCCEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEECCEEEEEEeCCC
Confidence 3468999999999999954 689999999965311 122457889999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++........
T Consensus 153 gg~L~~~l~~~------~~~e~~~~~~~~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~-- 224 (410)
T 3v8s_A 153 GGDLVNLMSNY------DVPEKWARFYTAEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMV-- 224 (410)
T ss_dssp TEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEE--
T ss_pred CCcHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcc--
Confidence 99999988653 2899999999999999999999999999999999999999999999999999876432110
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC----CCCchhhHHHHHHHHHHHhCCc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK----PNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~----~~~~sDvwSlGvil~elltG~~ 710 (791)
.....+||+.|+|||++.+.. ++.++|||||||++|||++|+.
T Consensus 225 ---------------------------------~~~~~~gt~~Y~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~ 271 (410)
T 3v8s_A 225 ---------------------------------RCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDT 271 (410)
T ss_dssp ---------------------------------ECCSCCSCGGGCCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSC
T ss_pred ---------------------------------cccCCcCCccccCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCC
Confidence 122456999999999998655 7899999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQK--RPSMKEALQA 776 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 776 (791)
||..... ......+........++.....+..+.+|+.+||..+|++ ||+++||++.
T Consensus 272 Pf~~~~~---------~~~~~~i~~~~~~~~~p~~~~~s~~~~~li~~lL~~~~~rlgR~~~~ei~~H 330 (410)
T 3v8s_A 272 PFYADSL---------VGTYSKIMNHKNSLTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 330 (410)
T ss_dssp TTCCSSH---------HHHHHHHHTHHHHCCCCTTCCCCHHHHHHHHHHSSCGGGCTTSSCHHHHHTS
T ss_pred CCCCCCh---------hhHHHHHHhccccccCCCcccccHHHHHHHHHHccChhhhCCCCCHHHHhcC
Confidence 9965421 1111222222211222222224567889999999999988 9999999974
No 86
>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*
Probab=100.00 E-value=2.2e-41 Score=358.01 Aligned_cols=249 Identities=24% Similarity=0.344 Sum_probs=200.0
Q ss_pred cceeccccCceEEEEEEeC-CC-------cEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEE
Q 003847 479 SAYILGASGSSIMYKAVLE-DG-------TALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g-------~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
..+.||+|+||.||+|+.. ++ +.||+|++........+.+.+|++++++++||||+++++++...+..++||
T Consensus 12 ~~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ 91 (289)
T 4fvq_A 12 FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDENILVQ 91 (289)
T ss_dssp EEEEEEEETTEEEEEEEEEEECGGGCEEEEEEEEEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEECCTTCCEEEE
T ss_pred eeeeeccCCCceEEEEEEecccccccccchhhhhhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEeCCCCEEEE
Confidence 3568999999999999843 33 579999998776666788999999999999999999999999999999999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC--------eEEeccCc
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME--------PKIGDFGL 622 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~--------~kL~DFGl 622 (791)
||+++++|.+++..... .+++..++.++.||+.||+|||++||+||||||+|||++.++. +||+|||+
T Consensus 92 e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~ 167 (289)
T 4fvq_A 92 EFVKFGSLDTYLKKNKN----CINILWKLEVAKQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGI 167 (289)
T ss_dssp ECCTTCBHHHHHHHTGG----GCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCS
T ss_pred ECCCCCCHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcc
Confidence 99999999999987542 3899999999999999999999999999999999999998887 99999999
Q ss_pred ccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHH
Q 003847 623 ERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVI 701 (791)
Q Consensus 623 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvi 701 (791)
+....... ...||+.|+|||++.+ ..++.++||||||++
T Consensus 168 ~~~~~~~~----------------------------------------~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~i 207 (289)
T 4fvq_A 168 SITVLPKD----------------------------------------ILQERIPWVPPECIENPKNLNLATDKWSFGTT 207 (289)
T ss_dssp CTTTSCHH----------------------------------------HHHHTTTTSCHHHHHCGGGCCHHHHHHHHHHH
T ss_pred cccccCcc----------------------------------------ccCCcCcccCHHHhCCCCCCCchhHHHHHHHH
Confidence 87543211 1237888999999987 678999999999999
Q ss_pred HHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 702 LLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 702 l~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
+|||++|..|+..... .......... ....+. .....+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 208 l~el~~g~~~~~~~~~---------~~~~~~~~~~--~~~~~~--~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~l~ 274 (289)
T 4fvq_A 208 LWEICSGGDKPLSALD---------SQRKLQFYED--RHQLPA--PKAAELANLINNCMDYEPDHRPSFRAIIRDLNSLF 274 (289)
T ss_dssp HHHHHTTTCCTTTTSC---------HHHHHHHHHT--TCCCCC--CSSCTTHHHHHHHSCSSGGGSCCHHHHHHHHHTCC
T ss_pred HHHHHcCCCCCccccc---------hHHHHHHhhc--cCCCCC--CCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHhc
Confidence 9999997665432211 0011111111 111111 13456789999999999999999999999999997
Q ss_pred CCC
Q 003847 782 SSP 784 (791)
Q Consensus 782 ~~~ 784 (791)
.+.
T Consensus 275 ~p~ 277 (289)
T 4fvq_A 275 TPD 277 (289)
T ss_dssp ---
T ss_pred CCC
Confidence 654
No 87
>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*
Probab=100.00 E-value=6.1e-41 Score=366.71 Aligned_cols=241 Identities=21% Similarity=0.253 Sum_probs=189.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch---hhHHHHHHHHHH-HhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV---DRFRDFETQVRV-IAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
.++||+|+||.||+|+.. +++.||||++.+... ...+.+.+|..+ ++.++||||+++++++.+.+..|+||||++
T Consensus 43 ~~~lG~G~fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~~~~~~~~lv~E~~~ 122 (373)
T 2r5t_A 43 LKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYIN 122 (373)
T ss_dssp EEEEECCTTCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEEECSSEEEEEEECCC
T ss_pred EEEEeeCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEEEeCCEEEEEEeCCC
Confidence 468999999999999954 689999999976432 223456667766 567899999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++.... .+++..++.++.||+.||+|||++||+||||||+|||++.++.+||+|||+++......
T Consensus 123 gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~---- 193 (373)
T 2r5t_A 123 GGELFYHLQRER-----CFLEPRARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN---- 193 (373)
T ss_dssp SCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCC----
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCC----
Confidence 999999988754 38999999999999999999999999999999999999999999999999998643211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 194 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~Pf~~ 241 (373)
T 2r5t_A 194 --------------------------------STTSTFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYS 241 (373)
T ss_dssp --------------------------------CCCCSBSCCCCCCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred --------------------------------CccccccCCccccCHHHhCCCCCCchhhhHHHHHHHHHHHcCCCCCCC
Confidence 112345699999999999999999999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
... .++.+................+.+++.+||+.||++||++.+.+
T Consensus 242 ~~~-------------~~~~~~i~~~~~~~~~~~~~~~~~li~~lL~~dp~~R~~~~~~~ 288 (373)
T 2r5t_A 242 RNT-------------AEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKRLGAKDDF 288 (373)
T ss_dssp SBH-------------HHHHHHHHHSCCCCCSSSCHHHHHHHHHHTCSSGGGSTTTTTTH
T ss_pred CCH-------------HHHHHHHHhcccCCCCCCCHHHHHHHHHHcccCHHhCCCCCCCH
Confidence 311 12222222222222223456788999999999999999985433
No 88
>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*
Probab=100.00 E-value=1.1e-40 Score=357.96 Aligned_cols=263 Identities=23% Similarity=0.311 Sum_probs=204.7
Q ss_pred hcceeccccCceEEEEEEe-----CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEE
Q 003847 478 ASAYILGASGSSIMYKAVL-----EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLII 549 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv 549 (791)
...+.||+|+||.||++.+ .+++.||||++.... ....+.+.+|++++++++||||+++++++.+. ...++|
T Consensus 34 ~~~~~lG~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv 113 (318)
T 3lxp_A 34 KKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLV 113 (318)
T ss_dssp EEEEEEEECSSEEEEEEEECSCC--CCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTTTEEEEE
T ss_pred hhhheecCCCCeEEEEEEEccCCCCCCcEEEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEecCCCceEEEE
Confidence 4457899999999998864 268999999998653 34457799999999999999999999999874 567999
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
|||+++++|.+++.... +++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 114 ~e~~~~~~L~~~l~~~~------~~~~~~~~i~~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~ 187 (318)
T 3lxp_A 114 MEYVPLGSLRDYLPRHS------IGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEG 187 (318)
T ss_dssp ECCCTTCBHHHHGGGSC------CCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTT
T ss_pred EecccCCcHHHHHhhCC------CCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCcccccccccc
Confidence 99999999999886542 899999999999999999999999999999999999999999999999999876532
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
..... ......||..|+|||++.+..++.++||||||+++|||++|+
T Consensus 188 ~~~~~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~g~ 234 (318)
T 3lxp_A 188 HEYYR---------------------------------VREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHC 234 (318)
T ss_dssp CSEEE---------------------------------C---CCCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTT
T ss_pred ccccc---------------------------------cccCCCCCceeeChHHhcCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 21100 111234788899999999888999999999999999999999
Q ss_pred cchhccccCC-----CCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 710 VIVVDELGQG-----NGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 710 ~pf~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
.||....... ............+....... .+.....+..+.+|+.+||+.||++|||+.|+++.|+++.
T Consensus 235 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dP~~Rps~~ell~~L~~l~ 309 (318)
T 3lxp_A 235 DSSQSPPTKFLELIGIAQGQMTVLRLTELLERGER--LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPILKTVH 309 (318)
T ss_dssp CGGGSHHHHHHHHHCSCCHHHHHHHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CcccccchhhhhhhcccccchhHHHHHHHHhcccC--CCCCccccHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHH
Confidence 9986532110 00000001111111111111 1122235578899999999999999999999999998763
No 89
>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A
Probab=100.00 E-value=2.4e-40 Score=350.11 Aligned_cols=246 Identities=21% Similarity=0.272 Sum_probs=193.4
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+..+|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||+++ +
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~-~ 85 (288)
T 1ob3_A 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVLVFEHLDQ-D 85 (288)
T ss_dssp EEEEEEETTEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEEECSSCEEEEEECCSE-E
T ss_pred hhhcccCCCEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEEccCCeEEEEEEecCC-C
Confidence 468999999999999998899999999965432 2246788999999999999999999999999999999999975 9
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 86 l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------ 155 (288)
T 1ob3_A 86 LKKLLDVCEG----GLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVR------ 155 (288)
T ss_dssp HHHHHHTSTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------
T ss_pred HHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCcccc------
Confidence 9988876432 389999999999999999999999999999999999999999999999999987642211
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||....
T Consensus 156 ------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 205 (288)
T 1ob3_A 156 ------------------------------KYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205 (288)
T ss_dssp ------------------------------------CCCTTCCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ------------------------------ccccccccccccCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1112358999999999976 458999999999999999999999996532
Q ss_pred cCCCCcchhchhHHHHHHHHhh----------------hcCc---------cchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAI----------------RADF---------EGKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~----------------~~~~---------~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
.. .....+..... ...+ .........+.+++.+||+.||++|||++
T Consensus 206 ~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 276 (288)
T 1ob3_A 206 EA---------DQLMRIFRILGTPNSKNWPNVTELPKYDPNFTVYEPLPWESFLKGLDESGIDLLSKMLKLDPNQRITAK 276 (288)
T ss_dssp HH---------HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCGGGTCCSCCHHHHHHHHHHTCSSTTTSCCHH
T ss_pred HH---------HHHHHHHHHHCCCChhhchhhhcccccccccccccCccHHHHhhhcCHHHHHHHHHHcCCCcccCCCHH
Confidence 10 00111110000 0000 00011345778999999999999999999
Q ss_pred HHHH
Q 003847 772 EALQ 775 (791)
Q Consensus 772 evl~ 775 (791)
|+++
T Consensus 277 e~l~ 280 (288)
T 1ob3_A 277 QALE 280 (288)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9986
No 90
>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*
Probab=100.00 E-value=2.2e-40 Score=351.97 Aligned_cols=260 Identities=14% Similarity=0.149 Sum_probs=205.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|+++++++ +|+||+++++++......++||||+ +++
T Consensus 15 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 91 (298)
T 1csn_A 15 GRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSD--APQLRDEYRTYKLLAGCTGIPNVYYFGQEGLHNVLVIDLL-GPS 91 (298)
T ss_dssp EEEEEECSSCEEEEEEETTTTEEEEEEEEECCTT--SCCHHHHHHHHHHTTTCTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeccCCc--cHHHHHHHHHHHHHhcCCCCCeEEeecCCCceeEEEEEec-CCC
Confidence 46899999999999994 6799999999865432 24678899999999 7999999999999999999999999 999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC-----eEEeccCcccccCCCCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME-----PKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~-----~kL~DFGla~~~~~~~~~ 632 (791)
|.+++..... ++++..+..++.||+.||+|||+.||+||||||+||+++.++. +||+|||+++........
T Consensus 92 L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~ 167 (298)
T 1csn_A 92 LEDLLDLCGR----KFSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTK 167 (298)
T ss_dssp HHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTC
T ss_pred HHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECcccccccccccc
Confidence 9999986532 3899999999999999999999999999999999999987776 999999999877543221
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
... .........||+.|+|||++.+..++.++||||||+++|||++|+.||
T Consensus 168 ~~~-----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~pf 218 (298)
T 1csn_A 168 QHI-----------------------------PYREKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPW 218 (298)
T ss_dssp CBC-----------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTT
T ss_pred ccc-----------------------------cccCccCCCCCcccCCchhhcCCCCChHHHHHHHHHHHHHHHcCCCCc
Confidence 110 011233456999999999999999999999999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
........ ......+.......... .....+..+.+++.+||+.||++||++++|++.|+++.
T Consensus 219 ~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~RP~~~~l~~~l~~~~ 282 (298)
T 1csn_A 219 QGLKAATN------KQKYERIGEKKQSTPLRELCAGFPEEFYKYMHYARNLAFDATPDYDYLQGLFSKVL 282 (298)
T ss_dssp SSCCSCCH------HHHHHHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHHCCTTCCCCHHHHHHHHHHHH
T ss_pred chhhcccc------HHHHHHHHhhccCccHHHHHhhCcHHHHHHHHHHhcCCcccCCCHHHHHHHHHHHH
Confidence 76422111 11111111111111100 00123467889999999999999999999999998764
No 91
>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}
Probab=100.00 E-value=9.8e-41 Score=362.86 Aligned_cols=246 Identities=26% Similarity=0.353 Sum_probs=185.0
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
....||+|+||.||+|+.. +++.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+++++
T Consensus 57 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~~~~ 134 (349)
T 2w4o_A 57 VESELGRGATSIVYRCKQKGTQKPYALKVLKKTV--DKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGE 134 (349)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred EeeEEeeCCCEEEEEEEECCCCcEEEEEEeccch--hHHHHHHHHHHHHhCCCCCCcceeeeEecCCeEEEEEEeCCCCC
Confidence 3468999999999999965 58899999997643 23678899999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC---CCCeEEeccCcccccCCCCCCCc
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
|.+++.... .+++.+++.++.|++.||+|||+.||+||||||+|||++. ++.+||+|||+++......
T Consensus 135 L~~~l~~~~-----~~~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~---- 205 (349)
T 2w4o_A 135 LFDRIVEKG-----YYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQV---- 205 (349)
T ss_dssp HHHHHTTCS-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC-------------
T ss_pred HHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCccc----
Confidence 999887543 3899999999999999999999999999999999999975 8899999999998654211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 206 ---------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~pf~~ 252 (349)
T 2w4o_A 206 ---------------------------------LMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFYD 252 (349)
T ss_dssp ----------------------------------------CGGGSCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ---------------------------------ccccccCCCCccCHHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 01234589999999999999999999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.... ......+.........+........+.+|+.+||+.||++|||+.|+++.
T Consensus 253 ~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~h 306 (349)
T 2w4o_A 253 ERGD--------QFMFRRILNCEYYFISPWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQH 306 (349)
T ss_dssp TTCH--------HHHHHHHHTTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred Cccc--------HHHHHHHHhCCCccCCchhhhCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 3211 00111111111100001112245678899999999999999999999873
No 92
>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*
Probab=100.00 E-value=1.4e-40 Score=348.11 Aligned_cols=248 Identities=24% Similarity=0.326 Sum_probs=201.2
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEcc--CceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--DEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--~~~~lv~e~~~ 554 (791)
..+.||+|+||.||+|+.. ++.||||++... .....+.+.+|++++++++||||+++++++.+. +..++||||++
T Consensus 14 ~~~~lg~G~~g~V~~~~~~-~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~e~~~ 92 (271)
T 3kmu_A 14 FLTKLNENHSGELWKGRWQ-GNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMP 92 (271)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECTTTSSSCEEEEECCT
T ss_pred HHHHhcCCCcceEEEEEEC-CeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEccCCCCCeEeeecccC
Confidence 3568999999999999985 899999999764 334456799999999999999999999999887 77899999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK--HVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~--ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+|+|.+++...... .+++..++.|+.|++.||+|||+.+ |+||||||+||+++.++.++|+|||++.....
T Consensus 93 ~~~L~~~l~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~---- 165 (271)
T 3kmu_A 93 YGSLYNVLHEGTNF---VVDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQS---- 165 (271)
T ss_dssp TCBHHHHHHSCSSC---CCCHHHHHHHHHHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSC----
T ss_pred CCcHHHHHhhcccC---CCCHHHHHHHHHHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecc----
Confidence 99999999865432 4899999999999999999999999 99999999999999999999999998654221
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCC---chhhHHHHHHHHHHHhCC
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNP---KWDVYSFGVILLELLTGK 709 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~---~sDvwSlGvil~elltG~ 709 (791)
....||+.|+|||++.+..++. ++||||||+++|||++|+
T Consensus 166 -------------------------------------~~~~~t~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~ 208 (271)
T 3kmu_A 166 -------------------------------------PGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTRE 208 (271)
T ss_dssp -------------------------------------TTCBSCGGGSCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCS
T ss_pred -------------------------------------cCccCCccccChhhhccCCCCCCCchhhHHHHHHHHHHHHhCC
Confidence 1224889999999998755544 899999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
.||.+... ................ ....+..+.+++.+||+.||++|||++|+++.|+++..
T Consensus 209 ~p~~~~~~---------~~~~~~~~~~~~~~~~--~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~L~~l~~ 270 (271)
T 3kmu_A 209 VPFADLSN---------MEIGMKVALEGLRPTI--PPGISPHVSKLMKICMNEDPAKRPKFDMIVPILEKMQD 270 (271)
T ss_dssp CTTTTSCH---------HHHHHHHHHSCCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHCC
T ss_pred CCccccCh---------HHHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhc
Confidence 99964311 1111111111111111 22245678999999999999999999999999998764
No 93
>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}
Probab=100.00 E-value=1e-40 Score=354.79 Aligned_cols=243 Identities=22% Similarity=0.337 Sum_probs=188.8
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch--------------------------hhHHHHHHHHHHHhccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV--------------------------DRFRDFETQVRVIAKLVHPN 532 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--------------------------~~~~~~~~E~~~l~~l~H~n 532 (791)
.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++|||
T Consensus 18 ~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ 97 (298)
T 2zv2_A 18 KDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRGPIEQVYQEIAILKKLDHPN 97 (298)
T ss_dssp EEEEEC--CCEEEEEEETTTTEEEEEEEEECC-------------------------------CHHHHHHHHHHTCCCTT
T ss_pred EeEEeecCCEEEEEEEECCCCcEEEEEEeehhhhhhhcccccccccccccccccccccccchHHHHHHHHHHHHhCCCCC
Confidence 46899999999999995 5689999999865421 11356889999999999999
Q ss_pred ccceeeEEEc--cCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec
Q 003847 533 LVRIRGFYWG--VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG 610 (791)
Q Consensus 533 Iv~l~~~~~~--~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~ 610 (791)
|+++++++.+ .+..++||||+++++|.+++... ++++..++.++.||+.||+|||+.||+||||||+|||++
T Consensus 98 iv~~~~~~~~~~~~~~~lv~e~~~~~~l~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~ 171 (298)
T 2zv2_A 98 VVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLK------PLSEDQARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVG 171 (298)
T ss_dssp BCCEEEEEECSSSSEEEEEEECCTTCBSCCSSCSS------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEC
T ss_pred CCeEEEEEEcCCCCEEEEEEecCCCCcHHHHhhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEC
Confidence 9999999987 56789999999999998754321 499999999999999999999999999999999999999
Q ss_pred CCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC--
Q 003847 611 NDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK-- 688 (791)
Q Consensus 611 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-- 688 (791)
.++.+||+|||+++....... ......||+.|+|||++.+..
T Consensus 172 ~~~~~kl~Dfg~~~~~~~~~~------------------------------------~~~~~~gt~~y~aPE~~~~~~~~ 215 (298)
T 2zv2_A 172 EDGHIKIADFGVSNEFKGSDA------------------------------------LLSNTVGTPAFMAPESLSETRKI 215 (298)
T ss_dssp TTSCEEECCCTTCEECSSSSC------------------------------------EECCCCSCGGGCCGGGCCTTCCC
T ss_pred CCCCEEEecCCCccccccccc------------------------------------cccCCcCCccccChhhhccCCCC
Confidence 999999999999987643211 011235899999999998755
Q ss_pred -CCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCC
Q 003847 689 -PNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKR 767 (791)
Q Consensus 689 -~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R 767 (791)
++.++|||||||++|||++|+.||.+.... .....+.... ..++........+.+++.+||+.||++|
T Consensus 216 ~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~---------~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~R 284 (298)
T 2zv2_A 216 FSGKALDVWAMGVTLYCFVFGQCPFMDERIM---------CLHSKIKSQA--LEFPDQPDIAEDLKDLITRMLDKNPESR 284 (298)
T ss_dssp EESHHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHCC--CCCCSSSCCCHHHHHHHHHHTCSCTTTS
T ss_pred CCCchhhhHhHHHHHHHHHHCCCCCCCccHH---------HHHHHHhccc--CCCCCccccCHHHHHHHHHHhhcChhhC
Confidence 378899999999999999999999653110 0011111111 1111112245678899999999999999
Q ss_pred CCHHHHHH
Q 003847 768 PSMKEALQ 775 (791)
Q Consensus 768 Ps~~evl~ 775 (791)
||+.|+++
T Consensus 285 ~s~~e~l~ 292 (298)
T 2zv2_A 285 IVVPEIKL 292 (298)
T ss_dssp CCHHHHTT
T ss_pred CCHHHHhc
Confidence 99999875
No 94
>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.6e-40 Score=351.13 Aligned_cols=252 Identities=23% Similarity=0.316 Sum_probs=203.3
Q ss_pred ceeccccCceEEEEEEeC---CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE---DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+|... +++.||||+++.. .....+.+.+|++++++++||||+++++++ ..+..++||||+++
T Consensus 15 ~~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 93 (287)
T 1u59_A 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC-QAEALMLVMEMAGG 93 (287)
T ss_dssp EEEEECCTTEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred hccccccCceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe-cCCCcEEEEEeCCC
Confidence 348999999999999853 6789999999875 344567899999999999999999999999 55678999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++..... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++...........
T Consensus 94 ~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~- 168 (287)
T 1u59_A 94 GPLHKFLVGKRE----EIPVSNVAELLHQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT- 168 (287)
T ss_dssp EEHHHHHTTCTT----TSCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEEC-
T ss_pred CCHHHHHHhCCc----cCCHHHHHHHHHHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceee-
Confidence 999999865432 489999999999999999999999999999999999999999999999999987653221100
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~ 714 (791)
......||+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 169 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~ 216 (287)
T 1u59_A 169 --------------------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKK 216 (287)
T ss_dssp --------------------------------CCCSSCCCGGGCCHHHHHHCEECHHHHHHHHHHHHHHHHTTSCCTTTT
T ss_pred --------------------------------ccccccccccccCHHHhccCCCCchhhHHHHHHHHHHHHcCCCCCccc
Confidence 1112347889999999988889999999999999999999 9999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
.... ............ ..+...+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 217 ~~~~----------~~~~~i~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 271 (287)
T 1u59_A 217 MKGP----------EVMAFIEQGKRM--ECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACY 271 (287)
T ss_dssp CCTH----------HHHHHHHTTCCC--CCCTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCHH----------HHHHHHhcCCcC--CCCCCcCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 3211 111111111111 112235678899999999999999999999999998863
No 95
>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*
Probab=100.00 E-value=4.1e-40 Score=346.06 Aligned_cols=241 Identities=21% Similarity=0.274 Sum_probs=199.5
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||+|... ++..||+|++........+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (277)
T 3f3z_A 13 LENTIGRGSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGE 92 (277)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCSCB
T ss_pred eeeEEeecCCEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCeEEEEEeccCCCc
Confidence 3568999999999999954 578999999977655556889999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe---cCCCCeEEeccCcccccCCCCCCCc
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||++ +.++.+||+|||++........
T Consensus 93 L~~~~~~~~-----~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~--- 164 (277)
T 3f3z_A 93 LFERVVHKR-----VFRESDAARIMKDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKM--- 164 (277)
T ss_dssp HHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSC---
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccc---
Confidence 999887654 38999999999999999999999999999999999999 7889999999999987543211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....||+.|+|||++.+. ++.++||||||+++|||++|+.||..
T Consensus 165 ----------------------------------~~~~~~t~~y~aPE~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~ 209 (277)
T 3f3z_A 165 ----------------------------------MRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSA 209 (277)
T ss_dssp ----------------------------------BCCCCSCTTTCCHHHHTTC-BCTTHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ----------------------------------hhccCCCCCccChHHhccc-CCchhhehhHHHHHHHHHHCCCCCCC
Confidence 1123589999999998764 89999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchH----HHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKE----EALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... .+.............. ..+..+.+++.+||+.||++|||+.|+++
T Consensus 210 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~R~s~~~~l~ 261 (277)
T 3f3z_A 210 PTD-------------SEVMLKIREGTFTFPEKDWLNVSPQAESLIRRLLTKSPKQRITSLQALE 261 (277)
T ss_dssp SSH-------------HHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCH-------------HHHHHHHHhCCCCCCchhhhcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 311 1111111122222221 23567899999999999999999999985
No 96
>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*
Probab=100.00 E-value=8e-41 Score=376.17 Aligned_cols=243 Identities=21% Similarity=0.241 Sum_probs=192.9
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||+|+||.||+|+. .+|+.||||++... .......+.+|++++++++||||+++++++...+..++||||++
T Consensus 152 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~~~~~~~~lv~e~~~ 231 (446)
T 4ejn_A 152 YLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 231 (446)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEEEETTEEEEEECCCS
T ss_pred EeEEEeeCcCEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEEeeCCEEEEEEeeCC
Confidence 357899999999999994 57899999999753 23334567889999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
+|+|.+++.... .+++..+..++.||+.||+|||+ .||+||||||+|||++.++.+||+|||+++......
T Consensus 232 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~--- 303 (446)
T 4ejn_A 232 GGELFFHLSRER-----VFSEDRARFYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDG--- 303 (446)
T ss_dssp SCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCC---
Confidence 999999987654 38999999999999999999998 999999999999999999999999999987533211
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
......+||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 304 ---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf~ 350 (446)
T 4ejn_A 304 ---------------------------------ATMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY 350 (446)
T ss_dssp ------------------------------------CCSSSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ---------------------------------cccccccCCccccCHhhcCCCCCCCccchhhhHHHHHHHhhCCCCCC
Confidence 11224569999999999999999999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQ 775 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~ 775 (791)
.... ..+...........+......+.+|+.+||+.||++|| +++|+++
T Consensus 351 ~~~~-------------~~~~~~i~~~~~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~t~~ell~ 404 (446)
T 4ejn_A 351 NQDH-------------EKLFELILMEEIRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQ 404 (446)
T ss_dssp CSSH-------------HHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSTTTSTTCSTTTHHHHHT
T ss_pred CCCH-------------HHHHHHHHhCCCCCCccCCHHHHHHHHHHcccCHHHhCCCCCCCHHHHHh
Confidence 5311 12222222222223333557789999999999999999 9999986
No 97
>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=8.8e-41 Score=362.81 Aligned_cols=263 Identities=24% Similarity=0.265 Sum_probs=205.4
Q ss_pred hhcceeccccCceEEEEEEe------CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEE
Q 003847 477 KASAYILGASGSSIMYKAVL------EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 548 (791)
+...+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+++++++ +||||+++++++...+..++
T Consensus 47 y~~~~~lG~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 126 (344)
T 1rjb_A 47 LEFGKVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIVNLLGACTLSGPIYL 126 (344)
T ss_dssp EEEEEEEEECSSEEEEEEEEESCSSSSCEEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEE
T ss_pred ceeeeeecCCCCceeEEeeeeccccCCcceEEEEEecccccCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEeeCCccEE
Confidence 34467999999999999995 24678999999754 233457899999999999 89999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcCCC------------------CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec
Q 003847 549 IYDFVPNGSLANARYRKMGSS------------------PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG 610 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~------------------~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~ 610 (791)
||||+++|+|.+++....... ...+++..++.++.||+.||+|||+.||+||||||+|||++
T Consensus 127 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~ 206 (344)
T 1rjb_A 127 IFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVT 206 (344)
T ss_dssp EEECCTTCBHHHHHHTTTTCC---------------------CCHHHHHHHHHHHHHHHHHHHHTTEEETTCSGGGEEEE
T ss_pred EEecCCCCcHHHHHhhccccccccccchhhhcccccccccccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCChhhEEEc
Confidence 999999999999998654210 12379999999999999999999999999999999999999
Q ss_pred CCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCC
Q 003847 611 NDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPN 690 (791)
Q Consensus 611 ~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~ 690 (791)
.++.+||+|||++.......... ......||+.|+|||++.+..++
T Consensus 207 ~~~~~kL~Dfg~~~~~~~~~~~~----------------------------------~~~~~~~t~~y~aPE~~~~~~~~ 252 (344)
T 1rjb_A 207 HGKVVKICDFGLARDIMSDSNYV----------------------------------VRGNARLPVKWMAPESLFEGIYT 252 (344)
T ss_dssp TTTEEEECCCGGGSCGGGCTTSE----------------------------------EETTEEECGGGCCHHHHHHCCCC
T ss_pred CCCcEEeCCCccCcccccCccce----------------------------------eccCccCccCccCHHHhccCCCC
Confidence 99999999999998664322110 01123378889999999988999
Q ss_pred CchhhHHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC
Q 003847 691 PKWDVYSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS 769 (791)
Q Consensus 691 ~~sDvwSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs 769 (791)
.++|||||||++|||+| |+.||...... .............. .....+..+.+++.+||+.||++|||
T Consensus 253 ~~~Di~slG~il~el~t~g~~p~~~~~~~---------~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps 321 (344)
T 1rjb_A 253 IKSDVWSYGILLWEIFSLGVNPYPGIPVD---------ANFYKLIQNGFKMD--QPFYATEEIYIIMQSCWAFDSRKRPS 321 (344)
T ss_dssp HHHHHHHHHHHHHHHTTTSCCSSTTCCCS---------HHHHHHHHTTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCC
T ss_pred hhHhHHHHHHHHHHHHcCCCCCcccCCcH---------HHHHHHHhcCCCCC--CCCCCCHHHHHHHHHHcCCCchhCcC
Confidence 99999999999999998 99999654211 11122222211111 11224567889999999999999999
Q ss_pred HHHHHHHhccCCCCC
Q 003847 770 MKEALQALEKIPSSP 784 (791)
Q Consensus 770 ~~evl~~L~~i~~~~ 784 (791)
+.|+++.|+.+....
T Consensus 322 ~~~l~~~l~~~~~~~ 336 (344)
T 1rjb_A 322 FPNLTSFLGCQLADA 336 (344)
T ss_dssp HHHHHHHHHHHC---
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999876543
No 98
>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*
Probab=100.00 E-value=1.9e-40 Score=366.51 Aligned_cols=270 Identities=20% Similarity=0.236 Sum_probs=202.3
Q ss_pred cceecccc--CceEEEEEEeC-CCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGAS--GSSIMYKAVLE-DGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G--~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
..+.||+| +||.||+|+.. +|+.||||++... .....+.+.+|++++++++|||||++++++.+.+..++||||+
T Consensus 29 ~~~~lG~G~~~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~ 108 (389)
T 3gni_B 29 LLTVIGKGFEDLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 108 (389)
T ss_dssp EEEEEEEETTTTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC
T ss_pred EEecccCCcCCceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEEEECCEEEEEEEcc
Confidence 35689999 99999999964 7999999999754 2344567889999999999999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++...... .+++..++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||.+..........
T Consensus 109 ~~~~L~~~l~~~~~~---~~~~~~~~~~~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~ 185 (389)
T 3gni_B 109 AYGSAKDLICTHFMD---GMNELAIAYILQGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQ 185 (389)
T ss_dssp TTCBHHHHHHHTCTT---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEEC
T ss_pred CCCCHHHHHhhhccc---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccc
Confidence 999999998775332 38999999999999999999999999999999999999999999999999987653221110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.. ........+||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 186 ~~-----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~p 236 (389)
T 3gni_B 186 RV-----------------------------VHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVP 236 (389)
T ss_dssp SC-----------------------------BCCCCTTCTTTGGGSCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred cc-----------------------------cccccccccccccccCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCC
Confidence 00 0011223469999999999987 6789999999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHh----------------------------------hhcCccchHHHHHHHHHHHh
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAA----------------------------------IRADFEGKEEALLSCFKLGY 757 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------------~~~~~~~~~~~~~~l~~li~ 757 (791)
|.+.............. .....+.. .....+........+.+|+.
T Consensus 237 f~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~li~ 315 (389)
T 3gni_B 237 FKDMPATQMLLEKLNGT-VPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTPRPSNGDSPSHPYHRTFSPHFHHFVE 315 (389)
T ss_dssp TTTCCSTTHHHHC---------------------------------------------------------CCHHHHHHHH
T ss_pred CCCCCHHHHHHHHhcCC-CCccccccccccccccccccccccccccccccccCccccccCCCCCCccccccCHHHHHHHH
Confidence 96532211100000000 00000000 00000011223456889999
Q ss_pred hccCCCCCCCCCHHHHHHH--hccCC
Q 003847 758 SCASPLPQKRPSMKEALQA--LEKIP 781 (791)
Q Consensus 758 ~cl~~dP~~RPs~~evl~~--L~~i~ 781 (791)
+||+.||++|||+.|+++. ++++.
T Consensus 316 ~~L~~dP~~Rpta~ell~hp~f~~~~ 341 (389)
T 3gni_B 316 QCLQRNPDARPSASTLLNHSFFKQIK 341 (389)
T ss_dssp HHTCSCTTTSCCHHHHTTSGGGGGC-
T ss_pred HHhhcCcccCCCHHHHhcCHHHHHHh
Confidence 9999999999999999864 45443
No 99
>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-40 Score=350.44 Aligned_cols=258 Identities=22% Similarity=0.313 Sum_probs=202.4
Q ss_pred hhcceeccccCceEEEEEEeC-C---CcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCce-EEEE
Q 003847 477 KASAYILGASGSSIMYKAVLE-D---GTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK-LIIY 550 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~-~---g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~-~lv~ 550 (791)
+...++||+|+||.||+|+.. + +..||+|++... .....+.+.+|++++++++||||+++++++...+.. ++||
T Consensus 23 ~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~ 102 (298)
T 3pls_A 23 THSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIMLPPEGLPHVLL 102 (298)
T ss_dssp EEEEEEEEEETTEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEE
T ss_pred EccCceeccCCCceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEecCCCCcEEEE
Confidence 344678999999999999843 2 237999999764 334557899999999999999999999999877665 9999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+.+|+|.+++..... .+++..+..|+.|++.||+|||+.||+||||||+||+++.++.+||+|||+++......
T Consensus 103 e~~~~~~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~ 178 (298)
T 3pls_A 103 PYMCHGDLLQFIRSPQR----NPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDRE 178 (298)
T ss_dssp CCCTTCBHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGG
T ss_pred ecccCCCHHHHHhcccc----CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCc
Confidence 99999999999876432 38999999999999999999999999999999999999999999999999998654321
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
... ........||+.|+|||.+.+..++.++||||||+++|||++|..
T Consensus 179 ~~~--------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~ 226 (298)
T 3pls_A 179 YYS--------------------------------VQQHRHARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGA 226 (298)
T ss_dssp GGC--------------------------------SCCSSCTTCGGGGSCHHHHTTCCCCHHHHHHHHHHHHHHHHHTSC
T ss_pred ccc--------------------------------cccCcCCCCCccccChhhhccCCCChhhchhhHHHHHHHHhhCCC
Confidence 110 011223458899999999999999999999999999999999766
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
|+...... ............ .......+..+.+++.+||+.||++|||++++++.|+++.
T Consensus 227 ~~~~~~~~---------~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 286 (298)
T 3pls_A 227 PPYRHIDP---------FDLTHFLAQGRR--LPQPEYCPDSLYQVMQQCWEADPAVRPTFRVLVGEVEQIV 286 (298)
T ss_dssp CTTTTSCG---------GGHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCccCCH---------HHHHHHhhcCCC--CCCCccchHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 54332111 011111111111 1112224567889999999999999999999999998874
No 100
>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*
Probab=100.00 E-value=4.2e-41 Score=360.01 Aligned_cols=250 Identities=21% Similarity=0.306 Sum_probs=191.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCce----EEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK----LIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~----~lv~e 551 (791)
.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++...... |+|||
T Consensus 17 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~lv~e 96 (311)
T 3ork_A 17 GEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYIVME 96 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EEEEccCCCEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeeccCCCCcccEEEEe
Confidence 46899999999999994 67899999999764 233456789999999999999999999998876544 99999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++++|.+++.... .+++.+++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 97 ~~~g~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~ 171 (311)
T 3ork_A 97 YVDGVTLRDIVHTEG-----PMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGN 171 (311)
T ss_dssp CCCEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC--------
T ss_pred cCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccccc
Confidence 999999999998654 389999999999999999999999999999999999999999999999999987643221
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.. .......||+.|+|||++.+..++.++||||||+++|||++|+.|
T Consensus 172 ~~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~~l~~ll~g~~p 218 (311)
T 3ork_A 172 SV---------------------------------TQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218 (311)
T ss_dssp -------------------------------------------CCTTCCHHHHHTCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred cc---------------------------------ccccccCcCcccCCHHHhcCCCCCchHhHHHHHHHHHHHHhCCCC
Confidence 10 112234589999999999999999999999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHH-HHhccC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEAL-QALEKI 780 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl-~~L~~i 780 (791)
|..... ............... ...+..+.+++.+||+.||++||++.+++ ..|.++
T Consensus 219 f~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~~ 279 (311)
T 3ork_A 219 FTGDSP-------------VSVAYQHVREDPIPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRADLVRV 279 (311)
T ss_dssp CCCSSH-------------HHHHHHHHHCCCCCHHHHSTTCCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHH
T ss_pred CCCCCh-------------HHHHHHHhcCCCCCcccccCCCCHHHHHHHHHHHhcCHhhChhhHHHHHHHHHHH
Confidence 965321 011111111111111 11346788999999999999999666554 445443
No 101
>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A
Probab=100.00 E-value=1.7e-40 Score=363.53 Aligned_cols=262 Identities=16% Similarity=0.169 Sum_probs=196.9
Q ss_pred ceeccccCceEEEEEEeCC------CcEEEEEEcCCCchhhH-----------HHHHHHHHHHhccCCCCccceeeEEEc
Q 003847 480 AYILGASGSSIMYKAVLED------GTALAVRRIGENSVDRF-----------RDFETQVRVIAKLVHPNLVRIRGFYWG 542 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~------g~~vavK~~~~~~~~~~-----------~~~~~E~~~l~~l~H~nIv~l~~~~~~ 542 (791)
...||+|+||.||+|...+ ++.||||++........ ..+..|+..++.++||||+++++++..
T Consensus 40 ~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~ 119 (364)
T 3op5_A 40 GLPIGQGGFGCIYLADMNSSESVGSDAPCVVKVEPSDNGPLFTELKFYQRAAKPEQIQKWIRTRKLKYLGVPKYWGSGLH 119 (364)
T ss_dssp EEECCCC-CCEEEEEEECCSSCCCTTCSEEEEEEETTCHHHHHHHHHHHHHCCHHHHHHHHHHTTCSCCCSCCEEEEEEE
T ss_pred EEEEecCCCeEEEEeeecCccccccccceEEEEeeccchhHHHHHHHHHhhhhhHHHHHHHHHhhccCCCCCeEEeeeee
Confidence 4689999999999998654 47899999876532211 123456667778899999999999887
Q ss_pred c----CceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec--CCCCeE
Q 003847 543 V----DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG--NDMEPK 616 (791)
Q Consensus 543 ~----~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~--~~~~~k 616 (791)
. ...++||||+ +++|.+++..... .+++..++.|+.||+.||+|||+.||+||||||+|||++ .++.+|
T Consensus 120 ~~~~~~~~~lv~e~~-g~~L~~~~~~~~~----~l~~~~~~~i~~qi~~~l~~lH~~~iiHrDlkp~Nill~~~~~~~~k 194 (364)
T 3op5_A 120 DKNGKSYRFMIMDRF-GSDLQKIYEANAK----RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLNYKNPDQVY 194 (364)
T ss_dssp EETTEEEEEEEEECE-EEEHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEESSCTTCEE
T ss_pred ccCCcceEEEEEeCC-CCCHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHHCCeEEecCCHHHEEEecCCCCeEE
Confidence 5 4479999999 9999999876532 499999999999999999999999999999999999999 889999
Q ss_pred EeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhH
Q 003847 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVY 696 (791)
Q Consensus 617 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvw 696 (791)
|+|||+++.+......... ........+||+.|+|||++.+..++.++|||
T Consensus 195 l~DFG~a~~~~~~~~~~~~-----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~ 245 (364)
T 3op5_A 195 LVDYGLAYRYCPEGVHKAY-----------------------------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLE 245 (364)
T ss_dssp ECCCTTCEESSGGGCCCCS-----------------------------SCCSSCCCCCCTTTCCHHHHTTCCCCHHHHHH
T ss_pred EEECCcceecccCCccccc-----------------------------ccCcccccCCCCCccCHHHhCCCCCCchhhHH
Confidence 9999999876532211100 01112345699999999999999999999999
Q ss_pred HHHHHHHHHHhCCcchhccccCCCCcchhch---hHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 697 SFGVILLELLTGKVIVVDELGQGNGLLVEDK---NRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 697 SlGvil~elltG~~pf~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
||||++|||+||+.||.+............. .....+.+..+.. ...+..+.+++..||+.||++||++.++
T Consensus 246 slG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~li~~cl~~~p~~RP~~~~l 320 (364)
T 3op5_A 246 ILGYCMIQWLTGHLPWEDNLKDPKYVRDSKIRYRENIASLMDKCFPA-----ANAPGEIAKYMETVKLLDYTEKPLYENL 320 (364)
T ss_dssp HHHHHHHHHHHSCCTTGGGTTCHHHHHHHHHHHHHCHHHHHHHHSCT-----TCCCHHHHHHHHHHHTCCTTCCCCHHHH
T ss_pred HHHHHHHHHHhCCCCccccccCHHHHHHHHHHhhhhHHHHHHHhccc-----ccCHHHHHHHHHHHhcCCCCCCCCHHHH
Confidence 9999999999999999764221100000000 0011111111100 1134678899999999999999999999
Q ss_pred HHHhccC
Q 003847 774 LQALEKI 780 (791)
Q Consensus 774 l~~L~~i 780 (791)
++.|+++
T Consensus 321 ~~~l~~~ 327 (364)
T 3op5_A 321 RDILLQG 327 (364)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998775
No 102
>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...
Probab=100.00 E-value=1e-40 Score=352.71 Aligned_cols=253 Identities=28% Similarity=0.382 Sum_probs=206.6
Q ss_pred hhcceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 477 KASAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
+.....||+|+||.||+|... +++.||||++..... ..+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 15 ~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~ 93 (288)
T 3kfa_A 15 ITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTY 93 (288)
T ss_dssp EEEEEESGGGTTCSEEEEEEGGGTEEEEEEEECSCST-HHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSEEEEEECCTT
T ss_pred eeEEeecCCCCceeEEEeEecCCCEEEEEEecCcCHH-HHHHHHHHHHHHHhCCCCCEeeEEEEEccCCCEEEEEEcCCC
Confidence 344578999999999999965 589999999976543 457899999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++...... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++..........
T Consensus 94 ~~L~~~~~~~~~~---~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~-- 168 (288)
T 3kfa_A 94 GNLLDYLRECNRQ---EVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA-- 168 (288)
T ss_dssp EEHHHHHHHCCTT---TSCHHHHHHHHHHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEE--
T ss_pred CcHHHHHHhcccC---CccHhHHHHHHHHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCcccc--
Confidence 9999999764432 48999999999999999999999999999999999999999999999999998765322110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~ 714 (791)
.....||+.|+|||++.+..++.++||||||+++|+|++ |+.||..
T Consensus 169 ---------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~ll~~g~~p~~~ 215 (288)
T 3kfa_A 169 ---------------------------------HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPG 215 (288)
T ss_dssp ---------------------------------ETTEEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSSTT
T ss_pred ---------------------------------ccCCccccCcCChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 112236788999999998899999999999999999999 8889865
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
.... ...+........ ......+..+.+++.+||+.||++|||+.|+++.|+++
T Consensus 216 ~~~~----------~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~~~~~l~~~ 269 (288)
T 3kfa_A 216 IDLS----------QVYELLEKDYRM--ERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETM 269 (288)
T ss_dssp CCGG----------GHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred CCHH----------HHHHHHhccCCC--CCCCCCCHHHHHHHHHHhCCChhhCcCHHHHHHHHHHH
Confidence 3211 111222211111 11222456789999999999999999999999999865
No 103
>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A
Probab=100.00 E-value=1.8e-40 Score=362.44 Aligned_cols=245 Identities=21% Similarity=0.237 Sum_probs=190.0
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.+.||+|+||.||+++.. +++.||||++...... .+.+.+|+.++++++||||+++++++...+..++||||+++|+|
T Consensus 25 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~~L 103 (361)
T 3uc3_A 25 VKDIGSGNFGVARLMRDKLTKELVAVKYIERGAAI-DENVQREIINHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGEL 103 (361)
T ss_dssp EEEESSSTTSSEEEEEETTTCCEEEEEEEESSTTS-CHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEECCCSCBH
T ss_pred EEEeccCCCEEEEEEEECCCCcEEEEEEEecCccc-cHHHHHHHHHHHhCCCCCCCcEEEEEeeCCEEEEEEEeCCCCCH
Confidence 468999999999999954 7899999999764332 36788999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC--eEEeccCcccccCCCCCCCcCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME--PKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~--~kL~DFGla~~~~~~~~~~~~~ 636 (791)
.+++.... .+++..++.++.|++.||+|||+.||+||||||+|||++.++. +||+|||+++......
T Consensus 104 ~~~l~~~~-----~~~~~~~~~i~~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~------ 172 (361)
T 3uc3_A 104 YERICNAG-----RFSEDEARFFFQQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHS------ 172 (361)
T ss_dssp HHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC-------------
T ss_pred HHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccC------
Confidence 99987654 3999999999999999999999999999999999999987765 9999999987432111
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCc-hhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPK-WDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~-sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+..++.+ +|||||||++|||++|+.||...
T Consensus 173 -------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~Pf~~~ 221 (361)
T 3uc3_A 173 -------------------------------QPKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP 221 (361)
T ss_dssp ---------------------------------------CTTSCHHHHHCSSCCHHHHHHHHHHHHHHHHHHSSCSCC--
T ss_pred -------------------------------CCCCCcCCCCcCChhhhcCCCCCCCeeeeehhHHHHHHHHhCCCCCCCC
Confidence 1123459999999999988777655 89999999999999999999654
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCc--cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADF--EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..... ............. +........+.+|+.+||+.||++|||+.|+++.
T Consensus 222 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rps~~ell~h 275 (361)
T 3uc3_A 222 EEPRD---------YRKTIQRILSVKYSIPDDIRISPECCHLISRIFVADPATRISIPEIKTH 275 (361)
T ss_dssp --CCC---------HHHHHHHHHTTCCCCCTTSCCCHHHHHHHHHHSCSCTTTSCCHHHHHTS
T ss_pred ccHHH---------HHHHHHHHhcCCCCCCCcCCCCHHHHHHHHHHccCChhHCcCHHHHHhC
Confidence 22111 1111111111111 1111235678899999999999999999999874
No 104
>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...
Probab=100.00 E-value=3.3e-40 Score=356.76 Aligned_cols=259 Identities=20% Similarity=0.320 Sum_probs=205.5
Q ss_pred hhcceeccccCceEEEEEEe--------CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCce
Q 003847 477 KASAYILGASGSSIMYKAVL--------EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEK 546 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~--------~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~ 546 (791)
+...+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+++++++ +||||+++++++...+..
T Consensus 37 y~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~ 116 (334)
T 2pvf_A 37 LTLGKPLGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPL 116 (334)
T ss_dssp EEEEEEEEECSSCEEEEEEETTCSTTCC---CEEEEEECCTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSCC
T ss_pred eEEeeEEeecCceeEEEeEeccccccccccceEEEEeeeccCCcHHHHHHHHHHHHHHHHhhcCCCEeeEEEEEccCCce
Confidence 34467899999999999985 35788999999765 334457899999999999 899999999999999999
Q ss_pred EEEEeccCCCChhHHHHhhcCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCe
Q 003847 547 LIIYDFVPNGSLANARYRKMGSS-----------PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEP 615 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~ 615 (791)
++||||+++|+|.+++....... ...+++.+++.++.||+.||+|||+.||+||||||+||+++.++.+
T Consensus 117 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~ 196 (334)
T 2pvf_A 117 YVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLVTENNVM 196 (334)
T ss_dssp EEEEECCTTCBHHHHHHTTSCTTCCSCC--------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCE
T ss_pred EEEEECCCCCcHHHHHHHhccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCccceEEEcCCCCE
Confidence 99999999999999998654211 1248999999999999999999999999999999999999999999
Q ss_pred EEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhh
Q 003847 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDV 695 (791)
Q Consensus 616 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDv 695 (791)
||+|||+++......... ......+|+.|+|||++.+..++.++||
T Consensus 197 kL~Dfg~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di 242 (334)
T 2pvf_A 197 KIADFGLARDINNIDYYK----------------------------------KTTNGRLPVKWMAPEALFDRVYTHQSDV 242 (334)
T ss_dssp EECCCTTCEECTTTSSEE----------------------------------CCSCCCCCGGGCCHHHHHHCEECHHHHH
T ss_pred EEcccccccccccccccc----------------------------------ccCCCCcccceeChHHhcCCCcChHHHH
Confidence 999999998764322110 0112347888999999988889999999
Q ss_pred HHHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 696 YSFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 696 wSlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
||||+++|||++ |+.||.+... .............. ........+.+++.+||+.||++|||+.|++
T Consensus 243 ~slG~il~ellt~g~~p~~~~~~----------~~~~~~~~~~~~~~--~~~~~~~~l~~li~~~l~~dp~~Rps~~ell 310 (334)
T 2pvf_A 243 WSFGVLMWEIFTLGGSPYPGIPV----------EELFKLLKEGHRMD--KPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310 (334)
T ss_dssp HHHHHHHHHHHTTSCCSSTTCCH----------HHHHHHHHHTCCCC--CCTTCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHHHHhCCCCCcCcCCH----------HHHHHHHhcCCCCC--CCccCCHHHHHHHHHHccCChhhCcCHHHHH
Confidence 999999999999 9999865311 11111111111111 1122456788999999999999999999999
Q ss_pred HHhccCC
Q 003847 775 QALEKIP 781 (791)
Q Consensus 775 ~~L~~i~ 781 (791)
+.|+++.
T Consensus 311 ~~L~~l~ 317 (334)
T 2pvf_A 311 EDLDRIL 317 (334)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998874
No 105
>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C
Probab=100.00 E-value=2.8e-40 Score=365.82 Aligned_cols=246 Identities=20% Similarity=0.232 Sum_probs=189.0
Q ss_pred eeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhc-cCCCCccceeeEEEc----cCceEEEEeccC
Q 003847 481 YILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAK-LVHPNLVRIRGFYWG----VDEKLIIYDFVP 554 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~-l~H~nIv~l~~~~~~----~~~~~lv~e~~~ 554 (791)
++||+|+||.||++.. .+|+.||||++... ..+.+|++++.+ .+||||++++++|.. .+..|+||||++
T Consensus 68 ~~LG~G~~g~V~~~~~~~~~~~vAiK~~~~~-----~~~~~E~~~~~~~~~hp~iv~l~~~~~~~~~~~~~~~lv~E~~~ 142 (400)
T 1nxk_A 68 QVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECLD 142 (400)
T ss_dssp EEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEECCC
T ss_pred ceeeeccCeEEEEEEECCCCCEEEEEEeCcc-----hhHHHHHHHHHHhcCCCCcceEeEEEeecccCCcEEEEEEEeCC
Confidence 5899999999999995 46899999998643 456788888754 589999999999875 567899999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC---CCCeEEeccCcccccCCCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---~~~~kL~DFGla~~~~~~~~ 631 (791)
+|+|.+++...... .+++..++.|+.||+.||+|||+.||+||||||+|||++. ++.+||+|||+++......
T Consensus 143 gg~L~~~l~~~~~~---~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~- 218 (400)
T 1nxk_A 143 GGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHN- 218 (400)
T ss_dssp SEEHHHHHHCC------CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC----
T ss_pred CCcHHHHHHHhCCC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCC-
Confidence 99999999765322 4999999999999999999999999999999999999997 7889999999998653211
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 219 ------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~p 262 (400)
T 1nxk_A 219 ------------------------------------SLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262 (400)
T ss_dssp --------------------------------------------CTTCCGGGSCCCCSSSHHHHHHHHHHHHHHHHSSCS
T ss_pred ------------------------------------ccccCCCCCCccCHhhcCCCCCCCcccHHHHHHHHHHHHhCCCC
Confidence 11234689999999999999999999999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|............. ..+..................+.+|+.+||+.||++|||+.|+++.
T Consensus 263 f~~~~~~~~~~~~~-----~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~Rpt~~eil~h 322 (400)
T 1nxk_A 263 FYSNHGLAISPGMK-----TRIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 322 (400)
T ss_dssp CCCCTTCSSCCSHH-----HHHHHTCCCCCTTTTTTSCHHHHHHHHTTSCSSGGGSCCHHHHHHS
T ss_pred CCCCccccccHHHH-----HHHHcCcccCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhcC
Confidence 97653322111110 1111111100001112245678999999999999999999999974
No 106
>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-40 Score=374.89 Aligned_cols=241 Identities=23% Similarity=0.332 Sum_probs=200.0
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+++++.++||||+++++++...+..|+||||+++
T Consensus 21 ~~~LG~G~fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~~~~~~~~lv~E~~~g 100 (476)
T 2y94_A 21 GDTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVSG 100 (476)
T ss_dssp EEEEECCSSSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCSS
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEEECCEEEEEEeCCCC
Confidence 468999999999999964 79999999996542 22346789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 101 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~----- 170 (476)
T 2y94_A 101 GELFDYICKNG-----RLDEKESRRLFQQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGE----- 170 (476)
T ss_dssp EEHHHHTTSSS-----SCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTC-----
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccc-----
Confidence 99999886543 39999999999999999999999999999999999999999999999999998754221
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....+||+.|+|||++.+..+ +.++|||||||++|||++|+.||.+
T Consensus 171 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~ 218 (476)
T 2y94_A 171 --------------------------------FLRTSCGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDD 218 (476)
T ss_dssp --------------------------------CBCCCCSCSTTCCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred --------------------------------cccccCCCcCeEChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCC
Confidence 1123469999999999988765 6899999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... ..+......+.+..+......+.+++.+||..||++|||+.|+++
T Consensus 219 ~~~-------------~~~~~~i~~~~~~~p~~~s~~~~~Li~~~L~~dP~~Rpt~~eil~ 266 (476)
T 2y94_A 219 DHV-------------PTLFKKICDGIFYTPQYLNPSVISLLKHMLQVDPMKRATIKDIRE 266 (476)
T ss_dssp SSS-------------HHHHHHHHTTCCCCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCH-------------HHHHHHHhcCCcCCCccCCHHHHHHHHHHcCCCchhCcCHHHHHh
Confidence 321 111122222222222224567889999999999999999999997
No 107
>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*
Probab=100.00 E-value=1.1e-40 Score=371.57 Aligned_cols=250 Identities=16% Similarity=0.196 Sum_probs=199.4
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..++||+|+||.||+|+.. +++.||||++.+... ...+.+.+|+.++..++||||++++++|.+.+..|+||||++
T Consensus 78 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lV~Ey~~ 157 (437)
T 4aw2_A 78 ILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLVMDYYV 157 (437)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCT
T ss_pred EEEEEEeCCCEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCEEEEEEecCC
Confidence 3468999999999999965 589999999965321 122348899999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++..... .+++..++.++.||+.||+|||+.|||||||||+|||++.++.+||+|||+++........
T Consensus 158 gg~L~~~l~~~~~----~l~e~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~-- 231 (437)
T 4aw2_A 158 GGDLLTLLSKFED----RLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTV-- 231 (437)
T ss_dssp TCBHHHHHHTTTT----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE--
T ss_pred CCcHHHHHHHccC----CCCHHHHHHHHHHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCc--
Confidence 9999999976432 3999999999999999999999999999999999999999999999999999865432110
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHHHHhCC
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~elltG~ 709 (791)
.....+||+.|+|||++. ...++.++|||||||++|||++|+
T Consensus 232 ---------------------------------~~~~~~GT~~Y~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~ 278 (437)
T 4aw2_A 232 ---------------------------------QSSVAVGTPDYISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGE 278 (437)
T ss_dssp ---------------------------------ECCSCCSCGGGCCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSS
T ss_pred ---------------------------------ccccccCCcCeeChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCC
Confidence 122356999999999997 567899999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccch-HHHHHHHHHHHhhccCCCCCC--CCCHHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK-EEALLSCFKLGYSCASPLPQK--RPSMKEALQA 776 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~li~~cl~~dP~~--RPs~~evl~~ 776 (791)
.||..... ......+........++.. ...+..+.+|+.+||..+|++ ||+++|+++.
T Consensus 279 ~Pf~~~~~---------~~~~~~i~~~~~~~~~p~~~~~~s~~~~dLi~~lL~~~~~r~~r~~~~eil~H 339 (437)
T 4aw2_A 279 TPFYAESL---------VETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREHRLGQNGIEDFKKH 339 (437)
T ss_dssp CTTCCSSH---------HHHHHHHHTHHHHCCCCSSCCCSCHHHHHHHHTTSSCGGGCTTTTTTHHHHTS
T ss_pred CCCCCCCh---------hHHHHhhhhccccccCCcccccCCHHHHHHHHHHhcccccccCCCCHHHHhCC
Confidence 99965321 1111222221111111111 124567889999999998888 9999999874
No 108
>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...
Probab=100.00 E-value=2.8e-40 Score=347.75 Aligned_cols=241 Identities=23% Similarity=0.341 Sum_probs=196.8
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 93 (279)
T 3fdn_A 14 GRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPL 93 (279)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred eeEEecCCCeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheEecCCEEEEEEecCCC
Confidence 46899999999999985 457899999986532 22246788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 94 ~~l~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~----- 163 (279)
T 3fdn_A 94 GTVYRELQKLS-----KFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSR----- 163 (279)
T ss_dssp EEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC---------
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCccc-----
Confidence 99999987764 38999999999999999999999999999999999999999999999999986543211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....||+.|+|||++.+..++.++||||||+++|+|++|+.||...
T Consensus 164 ---------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 210 (279)
T 3fdn_A 164 ---------------------------------RTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEAN 210 (279)
T ss_dssp -------------------------------------CCCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred ---------------------------------ccccCCCCCccCHhHhccCCCCccchhHhHHHHHHHHHHCCCCCCCC
Confidence 11235899999999999999999999999999999999999999643
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. ..............+......+.+++.+||+.||++|||++|+++.
T Consensus 211 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~h 258 (279)
T 3fdn_A 211 TY-------------QETYKRISRVEFTFPDFVTEGARDLISRLLKHNPSQRPMLREVLEH 258 (279)
T ss_dssp SH-------------HHHHHHHHHTCCCCCTTSCHHHHHHHHHHCCSSGGGSCCHHHHHHC
T ss_pred cH-------------HHHHHHHHhCCCCCCCcCCHHHHHHHHHHhccChhhCCCHHHHhhC
Confidence 11 1111111112222222245678899999999999999999999974
No 109
>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.8e-40 Score=360.14 Aligned_cols=247 Identities=22% Similarity=0.295 Sum_probs=193.8
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCC--CCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVH--PNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||+|+||.||++...+++.||||++... .....+.+.+|++++++++| +||+++++++...+..++|||+ .
T Consensus 13 i~~~lG~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e~-~ 91 (343)
T 3dbq_A 13 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMEC-G 91 (343)
T ss_dssp EEEEESCCSSEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECC-C
T ss_pred EEEEEecCCCeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeEeeCCEEEEEEeC-C
Confidence 45689999999999999888999999998654 33445788999999999986 9999999999999999999994 5
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++.... .+++.++..|+.||+.||+|||+.||+||||||+|||++ ++.+||+|||+++........
T Consensus 92 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~iiHrDikp~NIll~-~~~~kl~DFG~a~~~~~~~~~-- 163 (343)
T 3dbq_A 92 NIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS-- 163 (343)
T ss_dssp SEEHHHHHHHSC-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEE-TTEEEECCCSSSCCC--------
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCcceEEEE-CCcEEEeecccccccCccccc--
Confidence 889999998753 389999999999999999999999999999999999997 578999999999876432111
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-----------CCCCCchhhHHHHHHHH
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-----------IKPNPKWDVYSFGVILL 703 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----------~~~~~~sDvwSlGvil~ 703 (791)
......+||+.|+|||++.+ ..++.++|||||||++|
T Consensus 164 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ 211 (343)
T 3dbq_A 164 --------------------------------VVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 211 (343)
T ss_dssp --------------------------------------CCCCSSCCHHHHHHCC-----------CCHHHHHHHHHHHHH
T ss_pred --------------------------------ccCCCCcCCcCcCCHHHHhhccccccccccccCCCchhhHHHHHHHHH
Confidence 01123469999999999864 67899999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
||++|+.||..... .........+......++.. ....+.+|+.+||+.||++|||+.|+++.
T Consensus 212 ell~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~l~~li~~~L~~dp~~Rpt~~e~l~h 274 (343)
T 3dbq_A 212 YMTYGKTPFQQIIN--------QISKLHAIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRISIPELLAH 274 (343)
T ss_dssp HHHHSSCTTTTCCS--------HHHHHHHHHCTTSCCCCCCC--SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHhCCCcchhhhh--------HHHHHHHHhcCCcccCCccc--CCHHHHHHHHHHcCCChhHCCCHHHHHhC
Confidence 99999999964311 11122222222222222211 34568899999999999999999999864
No 110
>2eue_A Carbon catabolite derepressing protein kinase; kinase domain; 2.20A {Saccharomyces cerevisiae} PDB: 3fam_A 3hyh_A 3dae_A 2fh9_A 3mn3_A
Probab=100.00 E-value=2.1e-40 Score=347.91 Aligned_cols=240 Identities=23% Similarity=0.298 Sum_probs=178.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+ +
T Consensus 18 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~-~ 96 (275)
T 2eue_A 18 VKTLGEGSFAKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVIKSKDEIIMVIEYA-G 96 (275)
T ss_dssp CC---------EEEEECTTTCCEEEEEEECSCC-----CHHHHHHHHHHHHHCCCTTBCCEEEEEECSSCEEEEEECC-C
T ss_pred EEEEEcCCCEEEEEEEECCCCCEEEEEEEEhhhcchHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCeEEEEehhc-C
Confidence 46899999999999994 578999999997642 233567899999999999999999999999999999999999 7
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++.+++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 97 ~~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~---- 167 (275)
T 2eue_A 97 NELFDYIVQRD-----KMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNF---- 167 (275)
T ss_dssp EEHHHHHHTSS-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCSSCC------------
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCCeeccCChHhEEECCCCCEEEeecccceeccCccc----
Confidence 78888776643 389999999999999999999999999999999999999999999999999876542211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....||+.|+|||++.+..+ +.++||||||+++|||++|+.||..
T Consensus 168 ---------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (275)
T 2eue_A 168 ---------------------------------LKTSCGSPNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDD 214 (275)
T ss_dssp ----------------------------------------CTTCCHHHHCC-----THHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ---------------------------------ccCCCCCcCcCCceeeeCCCCCCcccchHHHHHHHHHHHhCCCCCCC
Confidence 112358999999999988765 7899999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... ..............+......+.+++.+||+.||++|||++|+++
T Consensus 215 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~ 262 (275)
T 2eue_A 215 ESI-------------PVLFKNISNGVYTLPKFLSPGAAGLIKRMLIVNPLNRISIHEIMQ 262 (275)
T ss_dssp SSH-------------HHHHHHHHHTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred CCH-------------HHHHHHHHhCCCCCCccCCHHHHHHHHHHhhcCHhHCCCHHHHhh
Confidence 311 111111222222222335567889999999999999999999975
No 111
>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*
Probab=100.00 E-value=5.2e-41 Score=361.60 Aligned_cols=253 Identities=24% Similarity=0.321 Sum_probs=198.8
Q ss_pred ceeccccCceEEEEEEe-CCCcE----EEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL-EDGTA----LAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~----vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
...||+|+||.||+|+. .+++. ||+|.+.... ....+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 18 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~ 96 (325)
T 3kex_A 18 LKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRLLGLCP-GSSLQLVTQYL 96 (325)
T ss_dssp EEEEECCSSCEEEEEEECCTTCSCCEEEEEEEECCTTSCSCBCSCCHHHHHHHTCCCTTBCCEEEEEC-BSSEEEEEECC
T ss_pred eeeeeecCCceEEEEEEcCCCceEEEEEEEEeccccccHHHHHHHHHHHHHHhcCCCCCcCeEEEEEc-CCccEEEEEeC
Confidence 46899999999999995 34544 8888875432 233456788999999999999999999885 56789999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++..... .+++..+..|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.........
T Consensus 97 ~~~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~ 172 (325)
T 3kex_A 97 PLGSLLDHVRQHRG----ALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQL 172 (325)
T ss_dssp TTCBSHHHHHSSGG----GSCTTHHHHHHHHHHHHHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCC
T ss_pred CCCCHHHHHHHccc----cCCHHHHHHHHHHHHHHHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccc
Confidence 99999999876532 38899999999999999999999999999999999999999999999999998765332110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
......||..|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 173 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~ 218 (325)
T 3kex_A 173 ----------------------------------LYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPY 218 (325)
T ss_dssp ----------------------------------C-----CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred ----------------------------------cccCCCCcccccChHHhccCCCChhhHhHHhHHHHHHHHhCCCCCc
Confidence 1123457889999999998899999999999999999999 99999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
...... ............ .........+.+++.+||+.||++||++.|+++.|+++...
T Consensus 219 ~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~el~~~l~~~~~~ 277 (325)
T 3kex_A 219 AGLRLA----------EVPDLLEKGERL--AQPQICTIDVYMVMVKCWMIDENIRPTFKELANEFTRMARD 277 (325)
T ss_dssp TTSCTT----------HHHHHHHTTCBC--CCCTTBCTTTTHHHHHHTCSCTTTSCCHHHHHHHHHHHTTS
T ss_pred cccCHH----------HHHHHHHcCCCC--CCCCcCcHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 654211 111111111111 11112345678899999999999999999999999887543
No 112
>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*
Probab=100.00 E-value=5.5e-40 Score=346.36 Aligned_cols=246 Identities=25% Similarity=0.328 Sum_probs=198.8
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||.||+|.. .+|+.||+|++... .....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~ 90 (284)
T 3kk8_A 11 KEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGG 90 (284)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred hhhhcCcCCeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEcCCEEEEEEecCCCC
Confidence 46899999999999995 46899999998654 3344577899999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC---eEEeccCcccccCCCCCCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~---~kL~DFGla~~~~~~~~~~ 633 (791)
+|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++. +||+|||++........
T Consensus 91 ~l~~~~~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~-- 163 (284)
T 3kk8_A 91 ELFEDIVARE-----FYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEA-- 163 (284)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCB--
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCcc--
Confidence 9999887664 3899999999999999999999999999999999999986655 99999999976542211
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....||+.|+|||++.+..++.++||||||+++|+|++|+.||.
T Consensus 164 -----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~ 208 (284)
T 3kk8_A 164 -----------------------------------WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFW 208 (284)
T ss_dssp -----------------------------------CCCSCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred -----------------------------------ccCCCCCcCCcCchhhcCCCCCcccchHHHHHHHHHHHHCCCCCC
Confidence 112458999999999999999999999999999999999999995
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+... ......+.........+........+.+++.+||+.||++|||+.|+++.
T Consensus 209 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~h 262 (284)
T 3kk8_A 209 DEDQ---------HRLYAQIKAGAYDYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQALKV 262 (284)
T ss_dssp CSSH---------HHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSTTTSCCHHHHTTS
T ss_pred CCch---------hHHHHHHHhccccCCchhhcccCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 5311 01111111111111111112245678899999999999999999999873
No 113
>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A
Probab=100.00 E-value=4.6e-40 Score=353.62 Aligned_cols=242 Identities=22% Similarity=0.292 Sum_probs=198.9
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCchh------hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVD------RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
..+.||+|+||.||+|+.. +|+.||||++...... ..+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 16 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 95 (321)
T 2a2a_A 16 IGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVYENRTDVVLILE 95 (321)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEC
T ss_pred EeeEeeecCCEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEEEEE
Confidence 4578999999999999954 6899999998654221 35779999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC----CeEEeccCcccccC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM----EPKIGDFGLERLVT 627 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~----~~kL~DFGla~~~~ 627 (791)
|+++++|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++ .+||+|||+++...
T Consensus 96 ~~~~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~ 170 (321)
T 2a2a_A 96 LVSGGELFDFLAQKE-----SLSEEEATSFIKQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE 170 (321)
T ss_dssp CCCSCBHHHHHHTCS-----CEEHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECC
T ss_pred cCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecC
Confidence 999999999987643 389999999999999999999999999999999999999887 79999999998764
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt 707 (791)
.... .....||+.|+|||++.+..++.++||||||+++|||++
T Consensus 171 ~~~~-------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 213 (321)
T 2a2a_A 171 DGVE-------------------------------------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 213 (321)
T ss_dssp TTCC-------------------------------------CCCCCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred cccc-------------------------------------ccccCCCCCccCcccccCCCCCCccccHHHHHHHHHHHH
Confidence 3211 123358999999999999999999999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
|+.||..... .+............. ...+..+.+++.+||+.||++|||+.|+++
T Consensus 214 g~~pf~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~e~l~ 272 (321)
T 2a2a_A 214 GASPFLGDTK-------------QETLANITSVSYDFDEEFFSHTSELAKDFIRKLLVKETRKRLTIQEALR 272 (321)
T ss_dssp SCCSSCCSSH-------------HHHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSTTTSCCHHHHHH
T ss_pred CCCCCCCCCH-------------HHHHHHHHhcccccChhhhcccCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 9999965311 111111111111111 113456889999999999999999999987
No 114
>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}
Probab=100.00 E-value=1.4e-40 Score=361.44 Aligned_cols=264 Identities=14% Similarity=0.157 Sum_probs=198.5
Q ss_pred ceeccccCceEEEEEEeC----CCcEEEEEEcCCCchh-----------hHHHHHHHHHHHhccCCCCccceeeEEEc--
Q 003847 480 AYILGASGSSIMYKAVLE----DGTALAVRRIGENSVD-----------RFRDFETQVRVIAKLVHPNLVRIRGFYWG-- 542 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~~~~-----------~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-- 542 (791)
.+.||+|+||.||+|+.. ++..||||++...... ..+.+.+|+.+++.++||||+++++++..
T Consensus 42 ~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~e~~~~~~~~~~~~~~e~~~~~~l~h~ni~~~~~~~~~~~ 121 (345)
T 2v62_A 42 GKKIGSGGFGLIYLAFPTNKPEKDARHVVKVEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEF 121 (345)
T ss_dssp EEEC------CEEEEEESSSCGGGCCEEEEEEECC-CHHHHHHHHHHHHCCHHHHHHHHHHHTCSCCCCCCEEEEEEEES
T ss_pred EeeEeecCCeEEEEEEecCCCCccceEEEEeeecCCcchHHHHHHHHHHhhhHHHHHHHhhccccccCcceeeccccccc
Confidence 468999999999999965 5789999998764321 11346678889999999999999999988
Q ss_pred --cCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC--CeEEe
Q 003847 543 --VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM--EPKIG 618 (791)
Q Consensus 543 --~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~--~~kL~ 618 (791)
....++||||+ +++|.+++.... .+++.+++.|+.||+.||+|||+.||+||||||+|||++.++ .+||+
T Consensus 122 ~~~~~~~lv~e~~-~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kL~ 195 (345)
T 2v62_A 122 KGRSYRFMVMERL-GIDLQKISGQNG-----TFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGYKNPDQVYLA 195 (345)
T ss_dssp SSCEEEEEEEECE-EEEHHHHCBGGG-----BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEESSSTTSEEEC
T ss_pred CCCcEEEEEEecc-CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCcCHHHEEEccCCCCcEEEE
Confidence 67889999999 999999887654 399999999999999999999999999999999999999877 99999
Q ss_pred ccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHH
Q 003847 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSF 698 (791)
Q Consensus 619 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSl 698 (791)
|||+++.+......... .........||+.|+|||++.+..++.++|||||
T Consensus 196 Dfg~a~~~~~~~~~~~~-----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~sl 246 (345)
T 2v62_A 196 DYGLSYRYCPNGNHKQY-----------------------------QENPRKGHNGTIEFTSLDAHKGVALSRRSDVEIL 246 (345)
T ss_dssp CCTTCEESSGGGCCCCC-----------------------------CCCGGGCSCSCTTTCCHHHHHTCCCCHHHHHHHH
T ss_pred eCCCceecccccccccc-----------------------------hhccccccCCCccccCHHHhcCCCCCchhhHHHH
Confidence 99999876532211000 0011123469999999999999899999999999
Q ss_pred HHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchH-------HHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 699 GVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKE-------EALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 699 Gvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
||++|||++|+.||........ ...... .......+... ..+..+.+++.+||+.||++||+++
T Consensus 247 G~il~ell~g~~pf~~~~~~~~--------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ 317 (345)
T 2v62_A 247 GYCMLRWLCGKLPWEQNLKDPV--------AVQTAK-TNLLDELPQSVLKWAPSGSSCCEIAQFLVCAHSLAYDEKPNYQ 317 (345)
T ss_dssp HHHHHHHHHSSCTTGGGTTCHH--------HHHHHH-HHHHHTTTHHHHHHSCTTSCCHHHHHHHHHHHTCCTTCCCCHH
T ss_pred HHHHHHHHhCCCCccccccccH--------HHHHHH-HhhcccccHHHHhhccccccHHHHHHHHHHHhhcCcccCCCHH
Confidence 9999999999999965322111 001110 11111111100 2345789999999999999999999
Q ss_pred HHHHHhccCCCCCCCC
Q 003847 772 EALQALEKIPSSPSPY 787 (791)
Q Consensus 772 evl~~L~~i~~~~~p~ 787 (791)
+|++.|+++.....+.
T Consensus 318 ~l~~~L~~~~~~~~~~ 333 (345)
T 2v62_A 318 ALKKILNPHGIPLGPL 333 (345)
T ss_dssp HHHHHHCTTCCCCCCC
T ss_pred HHHHHHhccCCcccCC
Confidence 9999999887655443
No 115
>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}
Probab=100.00 E-value=5.5e-40 Score=351.28 Aligned_cols=240 Identities=22% Similarity=0.200 Sum_probs=188.9
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCC--chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGEN--SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
....||+|+||+||+|+.. +|+.||||++... .......+..|+..+.++ +||||+++++++.+.+..++||||+
T Consensus 61 ~~~~LG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~~~~~~~~lv~e~~- 139 (311)
T 3p1a_A 61 RLSRLGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTELC- 139 (311)
T ss_dssp EEEEEEEETTEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECC-
T ss_pred eeheeccCCCeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEEEeCCEEEEEEecc-
Confidence 4568999999999999965 7999999998653 223334555666666555 8999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++..... .+++..++.|+.||+.||+|||+.+|+||||||+|||++.++.+||+|||++........
T Consensus 140 ~~~L~~~~~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~--- 212 (311)
T 3p1a_A 140 GPSLQQHCEAWGA----SLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGA--- 212 (311)
T ss_dssp CCBHHHHHHHHCS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC-------
T ss_pred CCCHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCC---
Confidence 7799998877643 399999999999999999999999999999999999999999999999999876542211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....||+.|+|||++.+ .++.++|||||||++|||++|..++..
T Consensus 213 ----------------------------------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~el~~g~~~~~~ 257 (311)
T 3p1a_A 213 ----------------------------------GEVQEGDPRYMAPELLQG-SYGTAADVFSLGLTILEVACNMELPHG 257 (311)
T ss_dssp ------------------------------------CCCCCGGGCCGGGGGT-CCSTHHHHHHHHHHHHHHHHTCCCCSS
T ss_pred ----------------------------------CcccCCCccccCHhHhcC-CCCchhhHHHHHHHHHHHHhCCCCCCC
Confidence 112348999999999886 789999999999999999999776533
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.. ....+....... .........+.+++.+||+.||++|||++|+++
T Consensus 258 ~~------------~~~~~~~~~~~~--~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 304 (311)
T 3p1a_A 258 GE------------GWQQLRQGYLPP--EFTAGLSSELRSVLVMMLEPDPKLRATAEALLA 304 (311)
T ss_dssp HH------------HHHHHTTTCCCH--HHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred cc------------HHHHHhccCCCc--ccccCCCHHHHHHHHHHcCCChhhCcCHHHHHh
Confidence 21 011111110000 001123467889999999999999999999986
No 116
>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A
Probab=100.00 E-value=4.2e-40 Score=348.92 Aligned_cols=247 Identities=21% Similarity=0.219 Sum_probs=192.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||+||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 7 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~- 85 (292)
T 3o0g_A 7 LEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQ- 85 (292)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCSE-
T ss_pred eeEecCCCCeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEEEeCCEEEEEEecCCC-
Confidence 46899999999999995 46899999999654 233346788999999999999999999999999999999999975
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
++.+.+..... .+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 86 ~l~~~~~~~~~----~l~~~~~~~~~~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----- 156 (292)
T 3o0g_A 86 DLKKYFDSCNG----DLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVR----- 156 (292)
T ss_dssp EHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCS-----
T ss_pred CHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccc-----
Confidence 66665554332 399999999999999999999999999999999999999999999999999987542211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC-CCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK-PNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+.. ++.++|||||||++|||++|+.||...
T Consensus 157 -------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~ 205 (292)
T 3o0g_A 157 -------------------------------CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPG 205 (292)
T ss_dssp -------------------------------CCCSCCSCGGGCCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCC
T ss_pred -------------------------------cccCCccccCCcChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCC
Confidence 112345899999999997765 799999999999999999998886432
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhc-------------------------CccchHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRA-------------------------DFEGKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
... ......+....... ...........+.+|+.+||+.||++|||+
T Consensus 206 ~~~--------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~ 277 (292)
T 3o0g_A 206 NDV--------DDQLKRIFRLLGTPTEEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQRISA 277 (292)
T ss_dssp SSH--------HHHHHHHHHHHCCCCTTTCTTGGGSTTCCCCCCCCTTCCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred CCH--------HHHHHHHHHHhCCCChhhhhhhcccccccccccccCCcchhhcccccChHHHHHHHHHhccChhhCCCH
Confidence 110 00111111100000 000011234577899999999999999999
Q ss_pred HHHHH
Q 003847 771 KEALQ 775 (791)
Q Consensus 771 ~evl~ 775 (791)
+|+++
T Consensus 278 ~e~l~ 282 (292)
T 3o0g_A 278 EEALQ 282 (292)
T ss_dssp HHHHT
T ss_pred HHHhc
Confidence 99986
No 117
>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=3.4e-40 Score=356.48 Aligned_cols=254 Identities=22% Similarity=0.398 Sum_probs=197.9
Q ss_pred cceeccccCceEEEEEEeCC-----CcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVLED-----GTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~-----g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
..+.||+|+||.||+|.... +..||||++... .......+.+|++++++++||||+++++++...+..++||||
T Consensus 48 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 127 (333)
T 1mqb_A 48 RQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEY 127 (333)
T ss_dssp EEEEEEECSSSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECSSSSEEEEEEC
T ss_pred cccEEecCCCeEEEEEEEecCCCCccccEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCCcEEEEeC
Confidence 35789999999999998532 346999999765 333456789999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++++|.+++..... .+++..++.++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++........
T Consensus 128 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~ 203 (333)
T 1mqb_A 128 MENGALDKFLREKDG----EFSVLQLVGMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEA 203 (333)
T ss_dssp CTTEEHHHHHHHTTT----CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC----------
T ss_pred CCCCcHHHHHHhCCC----CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhcccccc
Confidence 999999999876532 3899999999999999999999999999999999999999999999999999876532211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~p 711 (791)
.. ......+|+.|+|||++.+..++.++||||||+++|||++ |+.|
T Consensus 204 ~~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p 250 (333)
T 1mqb_A 204 TY---------------------------------TTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250 (333)
T ss_dssp ----------------------------------------CCCGGGSCHHHHHSCCCCHHHHHHHHHHHHHHHHTTSCCT
T ss_pred cc---------------------------------ccCCCCccccccCchhcccCCCCchhhhHHHHHHHHHHHcCCCCC
Confidence 00 0112236788999999999899999999999999999999 9999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
|..... . .....+.... ..+.....+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 251 f~~~~~---------~-~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~~ 308 (333)
T 1mqb_A 251 YWELSN---------H-EVMKAINDGF--RLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLI 308 (333)
T ss_dssp TTTCCH---------H-HHHHHHHTTC--CCCCCTTCBHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHHH
T ss_pred cccCCH---------H-HHHHHHHCCC--cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 854311 0 1111111111 11122234567889999999999999999999999998764
No 118
>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...
Probab=100.00 E-value=2.3e-40 Score=348.43 Aligned_cols=252 Identities=25% Similarity=0.370 Sum_probs=202.7
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...+.||+|+||.||+|...+++.||||++..... ..+.+.+|++++++++||||+++++++. .+..++||||+++++
T Consensus 16 ~~~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~~~~ 93 (279)
T 1qpc_A 16 KLVERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSM-SPDAFLAEANLMKQLQHQRLVRLYAVVT-QEPIYIITEYMENGS 93 (279)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEECCTTCB
T ss_pred hheeeecCCCCeEEEEEEEcCCcEEEEEEecCCcc-cHHHHHHHHHHHHhCCCcCcceEEEEEc-CCCcEEEEecCCCCC
Confidence 34578999999999999988888999999976543 3478999999999999999999999886 456899999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++...... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 94 L~~~l~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~----- 165 (279)
T 1qpc_A 94 LVDFLKTPSGI---KLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT----- 165 (279)
T ss_dssp HHHHTTSHHHH---TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEE-----
T ss_pred HHHHHhcCCCC---CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccc-----
Confidence 99998754321 3899999999999999999999999999999999999999999999999999876432111
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~ 716 (791)
......++..|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 166 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~ 215 (279)
T 1qpc_A 166 ------------------------------AREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMT 215 (279)
T ss_dssp ------------------------------CCTTCCCCTTTSCHHHHHHCEECHHHHHHHHHHHHHHHHTTTCCSSTTCC
T ss_pred ------------------------------cccCCCCccCccChhhhccCCCCchhhhHHHHHHHHHHHhCCCCCCcccC
Confidence 0112236788999999998889999999999999999999 888986531
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
.. ............ ......+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 216 ~~----------~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~ 268 (279)
T 1qpc_A 216 NP----------EVIQNLERGYRM--VRPDNCPEELYQLMRLCWKERPEDRPTFDYLRSVLEDFF 268 (279)
T ss_dssp HH----------HHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HH----------HHHHHHhcccCC--CCcccccHHHHHHHHHHhccChhhCCCHHHHHHHHHHHH
Confidence 10 111111111111 111224567889999999999999999999999998763
No 119
>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}
Probab=100.00 E-value=3.5e-40 Score=352.18 Aligned_cols=246 Identities=24% Similarity=0.338 Sum_probs=192.8
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
.+.||+|+||.||+++.. ++.||||++.... ..+.+.+|++++++++||||+++++++. +..++||||+++|+|.
T Consensus 13 ~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~hp~iv~~~~~~~--~~~~lv~e~~~~~~L~ 87 (307)
T 2eva_A 13 EEVVGRGAFGVVCKAKWR-AKDVAIKQIESES--ERKAFIVELRQLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLY 87 (307)
T ss_dssp EEEEECCSSSEEEEEEET-TEEEEEEECSSTT--HHHHHHHHHHHHHHCCCTTBCCEEEBCT--TTTEEEEECCTTCBHH
T ss_pred eeEeecCCCceEEEEEEC-CeeEEEEEecChh--HHHHHHHHHHHHhcCCCCCcCeEEEEEc--CCcEEEEEcCCCCCHH
Confidence 468999999999999975 7899999997543 3478999999999999999999999876 4589999999999999
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc---CCCeecCCCCCCeEecCCCC-eEEeccCcccccCCCCCCCcC
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE---KKHVHGNLKPRNVLLGNDME-PKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~---~~ivHrDlkp~NILl~~~~~-~kL~DFGla~~~~~~~~~~~~ 635 (791)
+++...... ..+++..++.++.|+++||+|||+ +||+||||||+||+++.++. +||+|||++.......
T Consensus 88 ~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~----- 160 (307)
T 2eva_A 88 NVLHGAEPL--PYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHM----- 160 (307)
T ss_dssp HHHHCSSSE--ECCCHHHHHHHHHHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC-------------
T ss_pred HHHhccCCC--CccCHHHHHHHHHHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEccccccccccccc-----
Confidence 998765322 137899999999999999999999 89999999999999998886 7999999987543211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
....||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 161 ----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~ 206 (307)
T 2eva_A 161 ----------------------------------TNNKGSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEI 206 (307)
T ss_dssp --------------------------------------CCTTSSCHHHHTCCCCCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred ----------------------------------ccCCCCCceEChhhhCCCCCCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence 1224899999999999999999999999999999999999999643
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
... ........... .........+..+.+++.+||+.||++|||++|+++.|+.+.
T Consensus 207 ~~~--------~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 262 (307)
T 2eva_A 207 GGP--------AFRIMWAVHNG--TRPPLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLM 262 (307)
T ss_dssp CSS--------HHHHHHHHHTT--CCCCCBTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHG
T ss_pred Ccc--------HHHHHHHHhcC--CCCCcccccCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHH
Confidence 211 00000001111 111112224567889999999999999999999999997753
No 120
>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.6e-40 Score=355.87 Aligned_cols=261 Identities=22% Similarity=0.267 Sum_probs=197.1
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc--CCCCccceeeEEEcc----CceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL--VHPNLVRIRGFYWGV----DEKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l--~H~nIv~l~~~~~~~----~~~~lv~e~ 552 (791)
..+.||+|+||.||+|+.. ++.||||++.... ...+..|.+++..+ +||||+++++++... ...++||||
T Consensus 41 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 116 (337)
T 3mdy_A 41 MVKQIGKGRYGEVWMGKWR-GEKVAVKVFFTTE---EASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDY 116 (337)
T ss_dssp EEEEEEEETTEEEEEEEET-TEEEEEEEEEGGG---HHHHHHHHHHHTSTTCCCTTBCCEEEEEEESCGGGCEEEEEECC
T ss_pred EEeEeecCCCeEEEEEEEC-CceEEEEEEeccc---cchhhhHHHHHHHHhhcCCCeeeEEEEEccCCCCCCceEEEEec
Confidence 3578999999999999975 8999999986542 23445556666554 899999999999887 678999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------CCeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK--------KHVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~--------~ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
+++|+|.+++... .+++..++.++.|++.||+|||+. ||+||||||+|||++.++.+||+|||+++
T Consensus 117 ~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~ 190 (337)
T 3mdy_A 117 HENGSLYDYLKST------TLDAKSMLKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 190 (337)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCcHHHHhhcc------CCCHHHHHHHHHHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCce
Confidence 9999999999654 289999999999999999999998 99999999999999999999999999998
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCc------hhhHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPK------WDVYSF 698 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~------sDvwSl 698 (791)
.......... .......||+.|+|||++.+..++.+ +|||||
T Consensus 191 ~~~~~~~~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diwsl 238 (337)
T 3mdy_A 191 KFISDTNEVD--------------------------------IPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMADMYSF 238 (337)
T ss_dssp ECC-----------------------------------------CCSSCSCGGGCCHHHHTTCCCTTCTHHHHHHHHHHH
T ss_pred eecccccccc--------------------------------CCCCCCccCcceeChhhcccccCCccccCccccchHHH
Confidence 7643221100 01223469999999999988766665 999999
Q ss_pred HHHHHHHHhCC----------cchhccccCCCCcchhchhHHHHHH-HHhhhcCccc---hHHHHHHHHHHHhhccCCCC
Q 003847 699 GVILLELLTGK----------VIVVDELGQGNGLLVEDKNRAIRLA-DAAIRADFEG---KEEALLSCFKLGYSCASPLP 764 (791)
Q Consensus 699 Gvil~elltG~----------~pf~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP 764 (791)
||++|||+||. .||........ ......... ........+. .......+.+++.+||+.||
T Consensus 239 G~il~el~tg~~~~~~~~~~~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP 313 (337)
T 3mdy_A 239 GLILWEVARRCVSGGIVEEYQLPYHDLVPSDP-----SYEDMREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNP 313 (337)
T ss_dssp HHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSC-----CHHHHHHHHTTSCCCCCCCGGGGGSHHHHHHHHHHHHHSCSSG
T ss_pred HHHHHHHHhccCcccccccccccHhhhcCCCC-----chhhhHHHHhhhccCccccccchhhHHHHHHHHHHHHhhhhCh
Confidence 99999999994 44433211110 001111111 1111111111 22467789999999999999
Q ss_pred CCCCCHHHHHHHhccCCCCCCC
Q 003847 765 QKRPSMKEALQALEKIPSSPSP 786 (791)
Q Consensus 765 ~~RPs~~evl~~L~~i~~~~~p 786 (791)
++|||+.|+++.|+++..+...
T Consensus 314 ~~Rps~~ell~~L~~l~~~~~~ 335 (337)
T 3mdy_A 314 ASRLTALRVKKTLAKMSESQDI 335 (337)
T ss_dssp GGSCCHHHHHHHHHHHHHTTTC
T ss_pred hhCCCHHHHHHHHHHHHhhccc
Confidence 9999999999999988765543
No 121
>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*
Probab=100.00 E-value=4.9e-40 Score=346.59 Aligned_cols=246 Identities=27% Similarity=0.396 Sum_probs=200.2
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEc---------------
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG--------------- 542 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--------------- 542 (791)
..+.||+|+||.||+|+.. +++.||||++.... +.+.+|++++++++||||+++++++..
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~----~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 90 (284)
T 2a19_B 15 EIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN----EKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRS 90 (284)
T ss_dssp EEEEEECSSSCCEEEEEETTTCCEEEEEEEECCS----GGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CC
T ss_pred eeeeeccCCceEEEEEEEcCCCeEEEEEEecccc----HHHHHHHHHHHhCCCCCEEEEeeeEeccccCccccccccccc
Confidence 3568999999999999965 79999999997653 356789999999999999999998864
Q ss_pred -cCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccC
Q 003847 543 -VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621 (791)
Q Consensus 543 -~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFG 621 (791)
....++||||+++++|.+++...... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||
T Consensus 91 ~~~~~~lv~e~~~~~~L~~~l~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 167 (284)
T 2a19_B 91 KTKCLFIQMEFCDKGTLEQWIEKRRGE---KLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFG 167 (284)
T ss_dssp EEEEEEEEECCCCSCBHHHHHHHGGGS---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCT
T ss_pred CcceEEEEEeccCCCCHHHHHhhccCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcch
Confidence 34579999999999999999765422 38999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHH
Q 003847 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVI 701 (791)
Q Consensus 622 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvi 701 (791)
++........ .....||+.|+|||++.+..++.++||||||++
T Consensus 168 ~~~~~~~~~~-------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 210 (284)
T 2a19_B 168 LVTSLKNDGK-------------------------------------RTRSKGTLRYMSPEQISSQDYGKEVDLYALGLI 210 (284)
T ss_dssp TCEESSCCSC-------------------------------------CCCCCSCCTTSCHHHHHCSCCCTHHHHHHHHHH
T ss_pred hheecccccc-------------------------------------ccccCCcccccChhhhccCCCcchhhhHHHHHH
Confidence 9987643211 112348999999999999999999999999999
Q ss_pred HHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 702 LLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 702 l~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
+|||++|..|+.... .....+. ....+ ......+.+++.+||+.||++|||+.|+++.|+.+.
T Consensus 211 l~~l~~~~~~~~~~~-----------~~~~~~~----~~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~e~l~~l~~~~ 273 (284)
T 2a19_B 211 LAELLHVCDTAFETS-----------KFFTDLR----DGIIS--DIFDKKEKTLLQKLLSKKPEDRPNTSEILRTLTVWK 273 (284)
T ss_dssp HHHHHSCCSSHHHHH-----------HHHHHHH----TTCCC--TTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHT
T ss_pred HHHHHhcCCcchhHH-----------HHHHHhh----ccccc--ccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHh
Confidence 999999999875321 0011111 11111 113456789999999999999999999999999887
Q ss_pred CCCC
Q 003847 782 SSPS 785 (791)
Q Consensus 782 ~~~~ 785 (791)
..+.
T Consensus 274 ~~~~ 277 (284)
T 2a19_B 274 KSPE 277 (284)
T ss_dssp C---
T ss_pred hCCC
Confidence 6654
No 122
>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*
Probab=100.00 E-value=8.8e-40 Score=350.73 Aligned_cols=249 Identities=24% Similarity=0.305 Sum_probs=188.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|.. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++ ++
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~-~~ 88 (317)
T 2pmi_A 10 LEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVIHTENKLTLVFEFMD-ND 88 (317)
T ss_dssp ---------CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEECCTTEEEEEEECCC-CB
T ss_pred eeEECCCCCEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEEEECCeEEEEEEecC-CC
Confidence 45899999999999995 468999999996543 2234678899999999999999999999999999999999997 69
Q ss_pred hhHHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 558 LANARYRKMG-SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 558 L~~~l~~~~~-~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
|.+++..... .....+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 89 L~~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~----- 163 (317)
T 2pmi_A 89 LKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN----- 163 (317)
T ss_dssp HHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCC-----
T ss_pred HHHHHHhccccccccCCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcc-----
Confidence 9998876542 2223489999999999999999999999999999999999999999999999999987542211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||...
T Consensus 164 -------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~ 212 (317)
T 2pmi_A 164 -------------------------------TFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGT 212 (317)
T ss_dssp -------------------------------CCCCCCSCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred -------------------------------cCCCCcccccccCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1123358999999999976 46899999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHh--------------------------------hhcCccchHHHHHHHHHHHhhccCCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAA--------------------------------IRADFEGKEEALLSCFKLGYSCASPL 763 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~~~~~~~~l~~li~~cl~~d 763 (791)
... .....+.+.. +.... .......+.+|+.+||+.|
T Consensus 213 ~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~L~~d 281 (317)
T 2pmi_A 213 NDE---------EQLKLIFDIMGTPNESLWPSVTKLPKYNPNIQQRPPRDLRQVLQPHT--KEPLDGNLMDFLHGLLQLN 281 (317)
T ss_dssp SHH---------HHHHHHHHHHCSCCTTTCGGGGGCTTCCTTCCCCCCCCSHHHHGGGC--SSCCCHHHHHHHHHHSCSS
T ss_pred ChH---------HHHHHHHHHhCCCChhHhhhhhhhhhcccccccccchhHHHhhcccc--cccCCHHHHHHHHHHCCCC
Confidence 211 0001111000 00000 0013457889999999999
Q ss_pred CCCCCCHHHHHHH
Q 003847 764 PQKRPSMKEALQA 776 (791)
Q Consensus 764 P~~RPs~~evl~~ 776 (791)
|++|||++|+++.
T Consensus 282 P~~Rpt~~e~l~h 294 (317)
T 2pmi_A 282 PDMRLSAKQALHH 294 (317)
T ss_dssp GGGSCCHHHHTTS
T ss_pred cccCCCHHHHhCC
Confidence 9999999999863
No 123
>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*
Probab=100.00 E-value=5.6e-40 Score=345.84 Aligned_cols=251 Identities=22% Similarity=0.320 Sum_probs=199.4
Q ss_pred cceeccccCceEEEEEEeCC----CcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAVLED----GTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
..+.||+|+||.||+|+..+ +..||||.+... .....+.+.+|++++++++||||+++++++.+ +..++||||+
T Consensus 16 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~-~~~~~v~e~~ 94 (281)
T 3cc6_A 16 LNRILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGIIEE-EPTWIIMELY 94 (281)
T ss_dssp EEEEEEECSSSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEECS-SSCEEEEECC
T ss_pred EEEEEEecCCeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCCEEEEecC
Confidence 45789999999999998432 346999999765 34456789999999999999999999999764 5678999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++++|.+++..... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 95 ~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~- 169 (281)
T 3cc6_A 95 PYGELGHYLERNKN----SLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY- 169 (281)
T ss_dssp TTCBHHHHHHHHTT----TCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC-------
T ss_pred CCCCHHHHHHhccc----cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCccccccccc-
Confidence 99999999976543 3899999999999999999999999999999999999999999999999999876432110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
......||+.|+|||++.+..++.++||||||+++|||++ |+.||
T Consensus 170 ----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~llt~g~~p~ 215 (281)
T 3cc6_A 170 ----------------------------------KASVTRLPIKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPF 215 (281)
T ss_dssp -------------------------------------CCCCCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCTT
T ss_pred ----------------------------------ccccCCCCcceeCchhhccCCCCchhccHHHHHHHHHHHhCCCCCc
Confidence 0112347888999999998899999999999999999998 99998
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
...... .......... ..+.....+..+.+++.+||+.||++||++.|+++.|+++.
T Consensus 216 ~~~~~~----------~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~ 272 (281)
T 3cc6_A 216 FWLENK----------DVIGVLEKGD--RLPKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVCSLSDVY 272 (281)
T ss_dssp TTSCGG----------GHHHHHHHTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred ccCChH----------HHHHHHhcCC--CCCCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHHHHH
Confidence 643211 0111111111 11112224567889999999999999999999999998763
No 124
>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*
Probab=100.00 E-value=5.6e-40 Score=356.53 Aligned_cols=242 Identities=23% Similarity=0.354 Sum_probs=195.3
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||+|+||.||+|+. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+..++||||+.
T Consensus 58 ~~~~lG~G~~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 137 (348)
T 1u5q_A 58 DLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVMEYCL 137 (348)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCS
T ss_pred eeeEEccCCCEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCeEEEEEecCC
Confidence 346899999999999994 67999999999653 23345678999999999999999999999999999999999997
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
|+|.+++..... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 138 -g~l~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~----- 207 (348)
T 1u5q_A 138 -GSASDLLEVHKK----PLQEVEIAAVTHGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA----- 207 (348)
T ss_dssp -EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSB-----
T ss_pred -CCHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCC-----
Confidence 688888765432 4999999999999999999999999999999999999999999999999998764311
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~elltG~~p 711 (791)
....||+.|+|||++. ...++.++|||||||++|||++|+.|
T Consensus 208 -----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p 252 (348)
T 1u5q_A 208 -----------------------------------NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPP 252 (348)
T ss_dssp -----------------------------------CCCCSCGGGCCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCT
T ss_pred -----------------------------------CcccCCcceeCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCC
Confidence 1235899999999984 56789999999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|..... ......+..... ... .....+..+.+++.+||+.||++|||++++++.
T Consensus 253 ~~~~~~---------~~~~~~~~~~~~-~~~-~~~~~~~~l~~li~~~l~~dP~~Rps~~~ll~h 306 (348)
T 1u5q_A 253 LFNMNA---------MSALYHIAQNES-PAL-QSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKH 306 (348)
T ss_dssp TTTSCH---------HHHHHHHHHSCC-CCC-CCTTSCHHHHHHHHHHTCSSGGGSCCHHHHTTC
T ss_pred CCCCCh---------HHHHHHHHhcCC-CCC-CCCCCCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 865311 011111111111 111 111245678899999999999999999999864
No 125
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7
Probab=100.00 E-value=2.1e-40 Score=380.42 Aligned_cols=257 Identities=23% Similarity=0.345 Sum_probs=207.8
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
...+.||+|+||.||+|...++..||||+++.... ..++|.+|+++|++++|+||+++++++.+ +..++||||+++|+
T Consensus 270 ~~~~~lG~G~fg~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~E~~~l~~l~hpniv~~~~~~~~-~~~~lv~e~~~~gs 347 (535)
T 2h8h_A 270 RLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMSKGS 347 (535)
T ss_dssp EEEEEEEECSSEEEEEEEETTTEEEEEEEECTTSS-CHHHHHHHHHHHHHCCCTTBCCEEEEECS-SSCEEEECCCTTEE
T ss_pred hhheecccCCCeEEEEEEECCCceEEEEEeCCCCC-CHHHHHHHHHHHHhCCCCCEeeEEEEEee-ccceEeeehhcCCc
Confidence 34578999999999999988888999999986543 24689999999999999999999999866 77899999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++...... .+++.+++.|+.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+......
T Consensus 348 L~~~l~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~----- 419 (535)
T 2h8h_A 348 LLDFLKGETGK---YLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT----- 419 (535)
T ss_dssp HHHHHSHHHHT---TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHH-----
T ss_pred HHHHHhhcCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCcee-----
Confidence 99999754322 3899999999999999999999999999999999999999999999999999865421100
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~ 716 (791)
......++..|+|||++.+..++.++|||||||++|||++ |+.||.+..
T Consensus 420 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~sDvwSlGv~l~el~t~g~~P~~~~~ 469 (535)
T 2h8h_A 420 ------------------------------ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMV 469 (535)
T ss_dssp ------------------------------TTCSTTSCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHTTTTCCSSTTCC
T ss_pred ------------------------------cccCCcCcccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCC
Confidence 0112236788999999998899999999999999999999 898986531
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCCCC
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSPSP 786 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~p 786 (791)
. ......+.... ..+........+.+|+.+||+.||++|||+++|++.|+.+.....|
T Consensus 470 ~----------~~~~~~i~~~~--~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~L~~~~~~~~~ 527 (535)
T 2h8h_A 470 N----------REVLDQVERGY--RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDYFTSTEP 527 (535)
T ss_dssp H----------HHHHHHHHTTC--CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHTSSCCCSC
T ss_pred H----------HHHHHHHHcCC--CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHhhccCc
Confidence 1 01111111111 1112223556789999999999999999999999999998765544
No 126
>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}
Probab=100.00 E-value=1.6e-40 Score=358.05 Aligned_cols=254 Identities=21% Similarity=0.335 Sum_probs=197.1
Q ss_pred ceeccccCceEEEEEEe-CCCcE----EEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL-EDGTA----LAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~----vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||+|+||.||+|+. .+++. ||+|.+... .....+.+.+|++++++++||||+++++++... ..++|+||+
T Consensus 20 ~~~lG~G~~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~-~~~~v~~~~ 98 (327)
T 3lzb_A 20 IKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQLITQLM 98 (327)
T ss_dssp EEEEEECSSEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEESS-SEEEEECCC
T ss_pred EEEeeeCCCeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEecC-CceEEEEec
Confidence 46899999999999994 34544 577877543 334457899999999999999999999999875 488999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++..... .+++..++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.........
T Consensus 99 ~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~ 174 (327)
T 3lzb_A 99 PFGCLLDYVREHKD----NIGSQYLLNWCVQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEY 174 (327)
T ss_dssp SSCBHHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC-----------
T ss_pred CCCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCccccc
Confidence 99999999887543 38999999999999999999999999999999999999999999999999998764322111
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf 712 (791)
......||+.|+|||++.+..++.++|||||||++|||++ |+.||
T Consensus 175 ----------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~ell~~g~~p~ 220 (327)
T 3lzb_A 175 ----------------------------------HAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPY 220 (327)
T ss_dssp ---------------------------------------CCCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTT
T ss_pred ----------------------------------cccCCCccccccCHHHHcCCCCChHHHHHHHHHHHHHHHHCCCCCC
Confidence 1112337888999999999999999999999999999999 99999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
...... ........... .+........+.+++.+||+.||++||++.|+++.|+++...+
T Consensus 221 ~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~~~~ 280 (327)
T 3lzb_A 221 DGIPAS----------EISSILEKGER--LPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFSKMARDP 280 (327)
T ss_dssp TTCCGG----------GHHHHHHTTCC--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHTSH
T ss_pred CCCCHH----------HHHHHHHcCCC--CCCCccCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHHhCc
Confidence 654221 11122221111 1122224567889999999999999999999999999876554
No 127
>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=365.98 Aligned_cols=249 Identities=14% Similarity=0.162 Sum_probs=198.3
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..++||+|+||.||+|+. .+|+.||||++.+.. ....+.+.+|.+++.+++||||+++++++.+.+..|+||||++
T Consensus 65 ~~~~lG~G~fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~~~~~~~~lVmE~~~ 144 (412)
T 2vd5_A 65 ILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYLVMEYYV 144 (412)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEEeeCCEEEEEEcCCC
Confidence 356899999999999996 479999999997532 1223458899999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++..... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++........
T Consensus 145 gg~L~~~l~~~~~----~l~~~~~~~~~~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~-- 218 (412)
T 2vd5_A 145 GGDLLTLLSKFGE----RIPAEMARFYLAEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTV-- 218 (412)
T ss_dssp SCBHHHHHHHHSS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCE--
T ss_pred CCcHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCcc--
Confidence 9999999986542 3999999999999999999999999999999999999999999999999999876432110
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-------CCCCCCchhhHHHHHHHHHHHh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-------SIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-------~~~~~~~sDvwSlGvil~ellt 707 (791)
.....+||+.|+|||++. ...++.++|||||||++|||++
T Consensus 219 ---------------------------------~~~~~~Gt~~Y~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyellt 265 (412)
T 2vd5_A 219 ---------------------------------RSLVAVGTPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFY 265 (412)
T ss_dssp ---------------------------------ECSSCCSCGGGCCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------ccceeccccCcCCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHh
Confidence 112346999999999997 3568999999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccc-hHHHHHHHHHHHhhccCCCCCCC---CCHHHHHHH
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEG-KEEALLSCFKLGYSCASPLPQKR---PSMKEALQA 776 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~R---Ps~~evl~~ 776 (791)
|+.||...... .....+........++. ....+.++.+|+.+||. +|++| |+++|+++.
T Consensus 266 G~~Pf~~~~~~---------~~~~~i~~~~~~~~~p~~~~~~s~~~~dli~~lL~-~p~~Rlgr~~~~ei~~H 328 (412)
T 2vd5_A 266 GQTPFYADSTA---------ETYGKIVHYKEHLSLPLVDEGVPEEARDFIQRLLC-PPETRLGRGGAGDFRTH 328 (412)
T ss_dssp SSCTTCCSSHH---------HHHHHHHTHHHHCCCC----CCCHHHHHHHHTTSS-CGGGCTTTTTHHHHHTS
T ss_pred CCCCCCCCCHH---------HHHHHHHhcccCcCCCccccCCCHHHHHHHHHHcC-ChhhcCCCCCHHHHhcC
Confidence 99999654211 11122222111111111 12245678999999999 99998 589999864
No 128
>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*
Probab=100.00 E-value=6.8e-40 Score=361.56 Aligned_cols=247 Identities=22% Similarity=0.294 Sum_probs=194.5
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccC--CCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLV--HPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||+|+||.||++...+++.||||++... .....+.+.+|++++++++ ||||+++++++...+..|+||| +.
T Consensus 60 ~~~~LG~G~fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~E-~~ 138 (390)
T 2zmd_A 60 ILKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CG 138 (390)
T ss_dssp EEEEEECCSSEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEE-CC
T ss_pred EEEEEccCCCeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEEecCCEEEEEEe-cC
Confidence 35689999999999999888999999998653 3445578999999999996 5999999999999999999999 56
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++.... .+++.++..|+.||+.||+|||+.||+||||||+|||++ ++.+||+|||+++.+......
T Consensus 139 ~~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~lH~~~ivHrDlkp~NIll~-~~~~kl~DFG~a~~~~~~~~~-- 210 (390)
T 2zmd_A 139 NIDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIV-DGMLKLIDFGIANQMQPDTTS-- 210 (390)
T ss_dssp SEEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCCGGGEEES-SSCEEECCCSSSCCC--------
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCCHHHEEEE-CCeEEEEecCccccccCCCcc--
Confidence 889999988654 389999999999999999999999999999999999996 579999999999876432111
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-----------CCCCCchhhHHHHHHHH
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-----------IKPNPKWDVYSFGVILL 703 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----------~~~~~~sDvwSlGvil~ 703 (791)
......+||+.|+|||++.+ ..++.++|||||||++|
T Consensus 211 --------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ 258 (390)
T 2zmd_A 211 --------------------------------VVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258 (390)
T ss_dssp -----------------------------------CCSCCCGGGCCHHHHHCC------------CCHHHHHHHHHHHHH
T ss_pred --------------------------------ccCCCCCcCCCccChHHhhhccccccccccccCCCChhhHHHHHHHHH
Confidence 01123469999999999865 46899999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
||++|+.||..... .......+.+......++.. ....+.+|+.+||+.||++|||+.|+++.
T Consensus 259 ell~G~~Pf~~~~~--------~~~~~~~~~~~~~~~~~~~~--~~~~~~~li~~~L~~dP~~Rps~~ell~h 321 (390)
T 2zmd_A 259 YMTYGKTPFQQIIN--------QISKLHAIIDPNHEIEFPDI--PEKDLQDVLKCCLKRDPKQRISIPELLAH 321 (390)
T ss_dssp HHHHSSCTTTTCCC--------HHHHHHHHHCTTSCCCCCCC--SCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHCCCcchhhhH--------HHHHHHHHhCccccCCCCcc--chHHHHHHHHHHcccChhhCCCHHHHhhC
Confidence 99999999964311 11112222222222122211 24578899999999999999999999864
No 129
>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...
Probab=100.00 E-value=4.1e-40 Score=348.46 Aligned_cols=254 Identities=25% Similarity=0.395 Sum_probs=192.3
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
..+.||+|+||.||+|+.. ..||||+++.. .....+.+.+|++++++++||||+++++++ ..+..++||||++++
T Consensus 28 ~~~~lG~G~~g~Vy~~~~~--~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~-~~~~~~lv~e~~~~~ 104 (289)
T 3og7_A 28 VGQRIGSGSFGTVYKGKWH--GDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS-TAPQLAIVTQWCEGS 104 (289)
T ss_dssp EEEEEEECSSEEEEEEESS--SEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE-CSSSCEEEEECCCEE
T ss_pred eeeEecCCCCeEEEEEEEc--CceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec-cCCccEEEEEecCCC
Confidence 4578999999999999864 35999999754 344457899999999999999999999965 566789999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++..... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++........
T Consensus 105 ~L~~~l~~~~~----~~~~~~~~~i~~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~---- 176 (289)
T 3og7_A 105 SLYHHLHASET----KFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGS---- 176 (289)
T ss_dssp EHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC---------------
T ss_pred cHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceecccccccccc----
Confidence 99998865432 4899999999999999999999999999999999999999999999999999765421110
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.......||+.|+|||++. +..++.++||||||+++|||++|+.||.
T Consensus 177 ------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~ 226 (289)
T 3og7_A 177 ------------------------------HQFEQLSGSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYS 226 (289)
T ss_dssp -------------------------------------CCCTTCCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred ------------------------------ccccccCCCccccCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCcc
Confidence 0112345899999999986 5678889999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHh-hhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAA-IRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
.... .....+..... ...... .....+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 227 ~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~l~~ 288 (289)
T 3og7_A 227 NINN---------RDQIIEMVGRGSLSPDLSKVRSNCPKRMKRLMAECLKKKRDERPSFPRILAEIEELAR 288 (289)
T ss_dssp SCCC---------HHHHHHHHHHTSCCCCTTSSCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTTC
T ss_pred ccch---------HHHHHHHhcccccCcchhhccccCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHhh
Confidence 5311 11112222111 111111 111245678999999999999999999999999998864
No 130
>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.7e-40 Score=357.98 Aligned_cols=257 Identities=20% Similarity=0.234 Sum_probs=196.2
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC-----chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN-----SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-----~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
..+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 30 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~ 109 (345)
T 3hko_A 30 LKGAIGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVYEDEQYICLVMEL 109 (345)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEEC
T ss_pred ecceeeecCCeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhhccCCeEEEEEeC
Confidence 357899999999999995 56899999998653 234457899999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCC-----------------------------------CCCCCCHHHHHHHHHHHHHHHHHHhcCCC
Q 003847 553 VPNGSLANARYRKMGS-----------------------------------SPCHLPWEARLKIAKGVARGLAFLHEKKH 597 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~-----------------------------------~~~~l~~~~~~~i~~qi~~gL~yLH~~~i 597 (791)
+++|+|.+++...... ....+++..++.|+.||+.||+|||+.||
T Consensus 110 ~~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~LH~~~i 189 (345)
T 3hko_A 110 CHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGI 189 (345)
T ss_dssp CCSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHHHHHHHHHHHHHHTTE
T ss_pred CCCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHCCc
Confidence 9999999987521110 01124677888999999999999999999
Q ss_pred eecCCCCCCeEecCCC--CeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCC
Q 003847 598 VHGNLKPRNVLLGNDM--EPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGI 675 (791)
Q Consensus 598 vHrDlkp~NILl~~~~--~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt 675 (791)
+||||||+||+++.++ .+||+|||+++.+....... ........||
T Consensus 190 vH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~--------------------------------~~~~~~~~gt 237 (345)
T 3hko_A 190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGE--------------------------------YYGMTTKAGT 237 (345)
T ss_dssp ECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC----------------------------------------CCC
T ss_pred cccCCChhhEEEecCCCceEEEeeccccccccccCccc--------------------------------cccccccCCC
Confidence 9999999999998776 89999999998654321110 0012234599
Q ss_pred CcccCcccccC--CCCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHH
Q 003847 676 SPYHAPESLRS--IKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCF 753 (791)
Q Consensus 676 ~~y~APE~~~~--~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 753 (791)
+.|+|||++.+ ..++.++|||||||++|||++|+.||..... ......+.........+........+.
T Consensus 238 ~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (345)
T 3hko_A 238 PYFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVND---------ADTISQVLNKKLCFENPNYNVLSPLAR 308 (345)
T ss_dssp GGGCCHHHHTCSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSH---------HHHHHHHHHCCCCTTSGGGGGSCHHHH
T ss_pred ccccCchhhccCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCh---------HHHHHHHHhcccccCCcccccCCHHHH
Confidence 99999999975 6789999999999999999999999965321 111122222221111122222456788
Q ss_pred HHHhhccCCCCCCCCCHHHHHHH
Q 003847 754 KLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 754 ~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+++.+||+.||++||++.|+++.
T Consensus 309 ~li~~~l~~~p~~Rps~~~~l~h 331 (345)
T 3hko_A 309 DLLSNLLNRNVDERFDAMRALQH 331 (345)
T ss_dssp HHHHHHSCSCTTTSCCHHHHHHS
T ss_pred HHHHHHcCCChhHCCCHHHHhcC
Confidence 99999999999999999999873
No 131
>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*
Probab=100.00 E-value=3.6e-40 Score=349.25 Aligned_cols=249 Identities=22% Similarity=0.305 Sum_probs=198.7
Q ss_pred eeccccCceEEEEEEe---CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 481 YILGASGSSIMYKAVL---EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~---~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
..||+|+||.||+|.. .+++.||||++.... ....+.+.+|++++++++||||+++++++ ..+..++||||+++
T Consensus 23 ~~lg~G~~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~-~~~~~~lv~e~~~~ 101 (291)
T 1xbb_A 23 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAEL 101 (291)
T ss_dssp EEEEECSSEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE-ESSSEEEEEECCTT
T ss_pred CccccccCeeeEeeeecCCCceeeEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE-CCCCcEEEEEeCCC
Confidence 3899999999999963 347899999997642 33357899999999999999999999999 56778999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++...........
T Consensus 102 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~- 175 (291)
T 1xbb_A 102 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK- 175 (291)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEE-
T ss_pred CCHHHHHHhCc-----CCCHHHHHHHHHHHHHHHHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCccc-
Confidence 99999997643 389999999999999999999999999999999999999999999999999987653321110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~ 714 (791)
......||+.|+|||++.+..++.++||||||+++|||++ |+.||..
T Consensus 176 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~ 223 (291)
T 1xbb_A 176 --------------------------------AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 223 (291)
T ss_dssp --------------------------------C----CCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred --------------------------------ccccCCCCceeeChHHhccCCCChhhhHHHHHHHHHHHHhcCCCCCCC
Confidence 0112236788999999988889999999999999999999 9999865
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
... ............. ......+..+.+++.+||+.||++||++.|+++.|+++
T Consensus 224 ~~~----------~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~~ 277 (291)
T 1xbb_A 224 MKG----------SEVTAMLEKGERM--GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 277 (291)
T ss_dssp CCH----------HHHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCH----------HHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHH
Confidence 321 1111111111111 11222456789999999999999999999999999875
No 132
>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}
Probab=100.00 E-value=6.9e-40 Score=350.24 Aligned_cols=256 Identities=18% Similarity=0.178 Sum_probs=196.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++
T Consensus 39 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 118 (309)
T 2h34_A 39 RRLVGRGGMGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFGEIDGQLYVDMRLING 118 (309)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCCC
T ss_pred EEEEcCCCCeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEEeeCCeEEEEEEecCC
Confidence 46899999999999995 478999999997642 23346789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 119 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~--- 190 (309)
T 2h34_A 119 VDLAAMLRRQG-----PLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLT--- 190 (309)
T ss_dssp EEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC-------------
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccc---
Confidence 99999988654 3899999999999999999999999999999999999999999999999998765432110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 191 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 238 (309)
T 2h34_A 191 --------------------------------QLGNTVGTLYYMAPERFSESHATYRADIYALTCVLYECLTGSPPYQGD 238 (309)
T ss_dssp --------------------------------------CCGGGCCGGGTCC----CCCHHHHHHHHHHHHHHSSCSSCSC
T ss_pred --------------------------------cccccCCCcCccCHHHHcCCCCCchHhHHHHHHHHHHHHHCCCCCCCc
Confidence 111335899999999999989999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-CHHHHHHHhccCCCCCC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-SMKEALQALEKIPSSPS 785 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-s~~evl~~L~~i~~~~~ 785 (791)
... ....................+..+.+++.+||+.||++|| +++++++.|+++.....
T Consensus 239 ~~~----------~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~Rp~s~~~l~~~l~~~l~~~~ 299 (309)
T 2h34_A 239 QLS----------VMGAHINQAIPRPSTVRPGIPVAFDAVIARGMAKNPEDRYVTCGDLSAAAHAALATAD 299 (309)
T ss_dssp HHH----------HHHHHHHSCCCCGGGTSTTCCTHHHHHHHHHTCSSGGGSCSSHHHHHHHHHHTCC---
T ss_pred hHH----------HHHHHhccCCCCccccCCCCCHHHHHHHHHhccCCHHHHHHhHHHHHHHHHHHHHhhc
Confidence 111 1111111111000011122445788999999999999999 99999999998765543
No 133
>3gxj_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3hmm_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*
Probab=100.00 E-value=1e-41 Score=362.96 Aligned_cols=261 Identities=20% Similarity=0.277 Sum_probs=185.9
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhc--cCCCCccceeeEEEccC----ceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAK--LVHPNLVRIRGFYWGVD----EKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~lv~e~ 552 (791)
..+.||+|+||.||+|+.. |+.||||++.... ...+.+|.+++.. ++||||+++++++...+ ..++||||
T Consensus 7 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~---~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~ 82 (303)
T 3gxj_A 7 LQESIGKGRFGEVWRGKWR-GEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 82 (303)
T ss_dssp CCEEEEECSSSEEEEC-CT-TSCEEEEECC-TT---HHHHHHHHHHHTSTTCCC-CBCCEEEEEEEECSSSEEEEEEEEC
T ss_pred ehhhccCCCCeEEEEEEEc-CcceEEEEecccc---hhhHHHHHHHHHHHhccCcceeeeeeecccCCCccceeEEEEec
Confidence 3568999999999999874 8999999997543 3567778888887 79999999999998877 78999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLH--------EKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH--------~~~ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
+++|+|.+++... .+++..+..++.|++.||+||| +.||+||||||+|||++.++.+||+|||+++
T Consensus 83 ~~~g~L~~~l~~~------~~~~~~~~~~~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nil~~~~~~~kl~DFg~a~ 156 (303)
T 3gxj_A 83 HEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 156 (303)
T ss_dssp CTTCCHHHHHHHC------CBCC-CHHHHC-CHHHHHC-CCCCBCSTTCBC-CCCSCCCGGGC-CCTTCCC-BCCCCC-C
T ss_pred cCCCCHHHHHhcc------CcchHHHHHHHHHHHHHHHHHHHHHhhhccCCCEeeCcCCHHHeEECCCCCEEEeecCcce
Confidence 9999999999654 2788899999999999999999 9999999999999999999999999999997
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC------CCCCchhhHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI------KPNPKWDVYSF 698 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~------~~~~~sDvwSl 698 (791)
.......... .......||+.|+|||++.+. .++.++|||||
T Consensus 157 ~~~~~~~~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Diwsl 204 (303)
T 3gxj_A 157 RHDSATDTID--------------------------------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 204 (303)
T ss_dssp CEETTTTEES--------------------------------CC-----CCGGGCCHHHHTTCSCTTCHHHHHHHHHHC-
T ss_pred eccCCCcccc--------------------------------cccCCCCcCccccCHhhhcCcccccccccCcchhHHHH
Confidence 6643321110 011234599999999999775 34468999999
Q ss_pred HHHHHHHHhC----------CcchhccccCCCCcchhchhHHHHHHHHhhhcCccc---hHHHHHHHHHHHhhccCCCCC
Q 003847 699 GVILLELLTG----------KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEG---KEEALLSCFKLGYSCASPLPQ 765 (791)
Q Consensus 699 Gvil~elltG----------~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP~ 765 (791)
||++|||++| +.||.......... .. ....+.........+. .......+.+++.+||+.||+
T Consensus 205 G~il~el~~g~~~~~~~~~~~~p~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~ 280 (303)
T 3gxj_A 205 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPSV--EE--MRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANGA 280 (303)
T ss_dssp CCCC-CTGGGBCBTTBC-CCCCTTTTTCC-CCCC--C---CHHHHTTSCCCCCCCGGGGSSHHHHHHHHHHHTTCCSSGG
T ss_pred HHHHHHHHhcCCCccccceeeccccccCCCCccH--HH--HHHHHHHhhcCCCccccccchhhHHHHHHHHHHHhccCcc
Confidence 9999999999 55554322111100 00 0111111122222211 123667899999999999999
Q ss_pred CCCCHHHHHHHhccCCCCCC
Q 003847 766 KRPSMKEALQALEKIPSSPS 785 (791)
Q Consensus 766 ~RPs~~evl~~L~~i~~~~~ 785 (791)
+|||+.|+++.|+++.....
T Consensus 281 ~Rps~~~i~~~L~~l~~~~~ 300 (303)
T 3gxj_A 281 ARLTALRIKKTLSQLSQQEG 300 (303)
T ss_dssp GSCCHHHHHHHHHC-CCC--
T ss_pred cCCCHHHHHHHHHHhhhhcc
Confidence 99999999999999987653
No 134
>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*
Probab=100.00 E-value=9.1e-40 Score=346.65 Aligned_cols=243 Identities=23% Similarity=0.305 Sum_probs=200.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||++... +++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 20 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 99 (294)
T 2rku_A 20 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 99 (294)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred EEEEeecCCEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCEEEEEEecCCC
Confidence 468999999999999964 5889999998654 234456789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++.++..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 100 ~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~---- 170 (294)
T 2rku_A 100 RSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---- 170 (294)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTC----
T ss_pred CCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCcc----
Confidence 99999887654 389999999999999999999999999999999999999999999999999987542211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 171 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~ 218 (294)
T 2rku_A 171 --------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 218 (294)
T ss_dssp --------------------------------CBCCCCSCCSSCCHHHHTTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred --------------------------------ccccccCCCCcCCcchhccCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 011245899999999999988999999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. .+............+......+.+++.+||+.||++|||++|+++.
T Consensus 219 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~ 266 (294)
T 2rku_A 219 CL-------------KETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 266 (294)
T ss_dssp SH-------------HHHHHHHHTTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CH-------------HHHHHHHhhccCCCccccCHHHHHHHHHHcccChhhCcCHHHHhhC
Confidence 21 0111111112222222245678899999999999999999999874
No 135
>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*
Probab=100.00 E-value=7.1e-40 Score=354.30 Aligned_cols=243 Identities=23% Similarity=0.305 Sum_probs=200.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+++.. +++.||+|++... .....+.+.+|+.++++++||||+++++++.+.+..++||||+++
T Consensus 46 ~~~lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~ 125 (335)
T 2owb_A 46 GRFLGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRR 125 (335)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCeEEEEEecCCC
Confidence 468999999999999954 5889999998654 234456789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++.+++.++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 126 ~~L~~~~~~~~-----~l~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~---- 196 (335)
T 2owb_A 126 RSLLELHKRRK-----ALTEPEARYYLRQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGE---- 196 (335)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTC----
T ss_pred CCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcc----
Confidence 99999887654 389999999999999999999999999999999999999999999999999987642211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 197 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 244 (335)
T 2owb_A 197 --------------------------------RKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLVGKPPFETS 244 (335)
T ss_dssp --------------------------------CBCCCCSCCSSCCHHHHHTSCBCTHHHHHHHHHHHHHHHHSSCTTCCS
T ss_pred --------------------------------cccccCCCccccCHHHhccCCCCchhhHHHHHHHHHHHHHCcCCCCCC
Confidence 011245899999999999989999999999999999999999999643
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.. .+...................+.+++.+||+.||++|||+.|+++.
T Consensus 245 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~~ 292 (335)
T 2owb_A 245 CL-------------KETYLRIKKNEYSIPKHINPVAASLIQKMLQTDPTARPTINELLND 292 (335)
T ss_dssp SH-------------HHHHHHHHHTCCCCCTTSCHHHHHHHHHHTCSSGGGSCCGGGGGGS
T ss_pred CH-------------HHHHHHHhcCCCCCCccCCHHHHHHHHHHccCChhHCcCHHHHhcC
Confidence 11 0111111112222222245678899999999999999999999873
No 136
>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*
Probab=100.00 E-value=4.3e-40 Score=351.93 Aligned_cols=260 Identities=21% Similarity=0.322 Sum_probs=196.6
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+..++||||++
T Consensus 36 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 115 (310)
T 2wqm_A 36 IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELAD 115 (310)
T ss_dssp EEEEEECC--CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCC
T ss_pred EEEeecCCCCceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCcEEEEEecCC
Confidence 346899999999999995 57999999999752 34445778999999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++...... ...+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 116 ~~~L~~~l~~~~~~-~~~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~--- 191 (310)
T 2wqm_A 116 AGDLSRMIKHFKKQ-KRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--- 191 (310)
T ss_dssp SCBHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC--------------
T ss_pred CCCHHHHHHHhccc-ccCCCHHHHHHHHHHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCc---
Confidence 99999998753321 12489999999999999999999999999999999999999999999999999876542211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
......||+.|+|||++.+..++.++||||||+++|||++|+.||.+
T Consensus 192 ---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~ 238 (310)
T 2wqm_A 192 ---------------------------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYG 238 (310)
T ss_dssp ----------------------------------------CCSSCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTC-
T ss_pred ---------------------------------cccccCCCeeEeChHHhCCCCCCchhhHHHHHHHHHHHHhCCCCCcc
Confidence 01123488999999999998999999999999999999999999865
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCcc--chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCCCC
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFE--GKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSPSP 786 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~p 786 (791)
.... . ...........++ ........+.+++.+||+.||++|||+.++++.|+++.....+
T Consensus 239 ~~~~--------~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~il~~l~~l~~~~~~ 301 (310)
T 2wqm_A 239 DKMN--------L---YSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDVTYVYDVAKRMHACTAS 301 (310)
T ss_dssp --CC--------H---HHHHHHHHTTCSCCCCTTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHHHHC-
T ss_pred cchh--------H---HHHHHHhhcccCCCCcccccCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHHhhhh
Confidence 3211 0 1111111111111 0112456788999999999999999999999999998654433
No 137
>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=1.7e-39 Score=355.08 Aligned_cols=191 Identities=21% Similarity=0.303 Sum_probs=167.8
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-----CCCccceeeEEEccCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-----HPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
.+.||+|+||.||+|+. .+++.||||++.... ...+.+..|++++++++ ||||+++++++...+..++||||+
T Consensus 40 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~ 118 (360)
T 3llt_A 40 IRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIK-KYTRSAKIEADILKKIQNDDINNNNIVKYHGKFMYYDHMCLIFEPL 118 (360)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCH-HHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEEEETTEEEEEECCC
T ss_pred EEEEcccCCeEEEEEEECCCCeEEEEEEeccch-hhhhhhHHHHHHHHHhcccCCCCCCeecccceeeECCeeEEEEcCC
Confidence 46899999999999995 578999999997542 33467788999999986 999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC----------------------
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---------------------- 611 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---------------------- 611 (791)
+++|.+++...... .+++..++.|+.||+.||+|||+.||+||||||+|||++.
T Consensus 119 -~~~L~~~~~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~ 194 (360)
T 3llt_A 119 -GPSLYEIITRNNYN---GFHIEDIKLYCIEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIY 194 (360)
T ss_dssp -CCBHHHHHHHTTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEE
T ss_pred -CCCHHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccccccc
Confidence 99999999875432 3899999999999999999999999999999999999975
Q ss_pred ---CCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC
Q 003847 612 ---DMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK 688 (791)
Q Consensus 612 ---~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~ 688 (791)
++.+||+|||+++..... .....||+.|+|||++.+..
T Consensus 195 ~~~~~~~kl~DFG~a~~~~~~---------------------------------------~~~~~gt~~y~aPE~~~~~~ 235 (360)
T 3llt_A 195 RTKSTGIKLIDFGCATFKSDY---------------------------------------HGSIINTRQYRAPEVILNLG 235 (360)
T ss_dssp EESCCCEEECCCTTCEETTSC---------------------------------------CCSCCSCGGGCCHHHHTTCC
T ss_pred ccCCCCEEEEeccCceecCCC---------------------------------------CcCccCcccccCcHHHcCCC
Confidence 788999999999864321 11345899999999999999
Q ss_pred CCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 689 PNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 689 ~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
++.++|||||||++|||++|+.||..
T Consensus 236 ~~~~~DiwslG~il~ell~g~~pf~~ 261 (360)
T 3llt_A 236 WDVSSDMWSFGCVLAELYTGSLLFRT 261 (360)
T ss_dssp CCTTHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCccchHHHHHHHHHHHHCCCCCCC
Confidence 99999999999999999999999965
No 138
>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*
Probab=100.00 E-value=2.9e-40 Score=376.64 Aligned_cols=249 Identities=20% Similarity=0.225 Sum_probs=202.1
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
...+||+|+||.||+|+. .+|+.||||++.... ......+.+|+++|++++||||+++++++.+.+..|+||||++
T Consensus 188 ~~~~LG~G~fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmEy~~ 267 (576)
T 2acx_A 188 QYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTLMN 267 (576)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEEeeCCEEEEEEEcCC
Confidence 357899999999999995 479999999996532 2234568899999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|+|.+++...... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 268 gg~L~~~l~~~~~~---~l~e~~~~~i~~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~--- 341 (576)
T 2acx_A 268 GGDLKFHIYHMGQA---GFPEARAVFYAAEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT--- 341 (576)
T ss_dssp SCBHHHHHHSSSSC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC---
T ss_pred CCcHHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCcc---
Confidence 99999988765422 389999999999999999999999999999999999999999999999999987642211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
....+||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 342 ----------------------------------~~~~~GT~~Y~APEvl~~~~~~~~~DiwSLGvilyeLltG~~PF~~ 387 (576)
T 2acx_A 342 ----------------------------------IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQ 387 (576)
T ss_dssp ----------------------------------EECCCSCGGGCCHHHHTTCEESSHHHHHHHHHHHHHHHHSSCSSSC
T ss_pred ----------------------------------ccccCCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCcc
Confidence 1124699999999999998999999999999999999999999976
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQA 776 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~ 776 (791)
...... ....... ............+..+.+|+.+||+.||++|| +++|+++.
T Consensus 388 ~~~~~~------~~~i~~~---i~~~~~~~p~~~s~~~~dLI~~lL~~dP~~R~g~~~~sa~eil~H 445 (576)
T 2acx_A 388 RKKKIK------REEVERL---VKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEH 445 (576)
T ss_dssp SSSCCC------HHHHHHH---HHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTCSSSHHHHHHTS
T ss_pred cccchh------HHHHHHH---hhcccccCCccCCHHHHHHHHHhccCCHHHcCCCCCCCHHHHHhC
Confidence 432211 1111111 11111112223557789999999999999999 78888753
No 139
>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A
Probab=100.00 E-value=6.6e-40 Score=349.49 Aligned_cols=245 Identities=22% Similarity=0.278 Sum_probs=196.4
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||+++. .+|+.||||++........+.+.+|++++++++||||+++++++.+.+..++||||+++++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 92 (304)
T 2jam_A 13 FMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGE 92 (304)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSCB
T ss_pred eeeeccCCCCceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhcccCCEEEEEEEcCCCcc
Confidence 356899999999999995 4799999999986654455678999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe---cCCCCeEEeccCcccccCCCCCCCc
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||++ +.++.+||+|||+++......
T Consensus 93 L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~---- 163 (304)
T 2jam_A 93 LFDRILERG-----VYTEKDASLVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI---- 163 (304)
T ss_dssp HHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBT----
T ss_pred HHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCc----
Confidence 999987654 38999999999999999999999999999999999999 788999999999987543210
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 164 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 209 (304)
T 2jam_A 164 ----------------------------------MSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPFYE 209 (304)
T ss_dssp ----------------------------------THHHHSCCCBCCTTTBSSCSCCHHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred ----------------------------------cccccCCCCccChHHhccCCCCchhhHHHHHHHHHHHHHCCCCCCC
Confidence 0122488999999999999999999999999999999999999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... ......+.........+.....+..+.+++.+||+.||++|||+.|+++
T Consensus 210 ~~~---------~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 261 (304)
T 2jam_A 210 ETE---------SKLFEKIKEGYYEFESPFWDDISESAKDFICHLLEKDPNERYTCEKALS 261 (304)
T ss_dssp SCH---------HHHHHHHHHCCCCCCTTTTTTSCHHHHHHHHHHHCSSTTTSCCHHHHHT
T ss_pred CCH---------HHHHHHHHcCCCCCCccccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 321 0111111111110011111224567889999999999999999999986
No 140
>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}
Probab=100.00 E-value=5.2e-40 Score=364.96 Aligned_cols=270 Identities=20% Similarity=0.286 Sum_probs=186.4
Q ss_pred chHHHhhhcceeccccCceEEEEEEeC---CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEc--cCc
Q 003847 471 ELETLLKASAYILGASGSSIMYKAVLE---DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG--VDE 545 (791)
Q Consensus 471 ~~~~~~~~~~~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~ 545 (791)
.+++.....+.+||+|+||.||+|+.. +++.||||++...... +.+.+|++++++++||||+++++++.. ...
T Consensus 17 ~~~~~y~~~g~~lG~G~~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~--~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~ 94 (405)
T 3rgf_A 17 RVEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGIS--MSACREIALLRELKHPNVISLQKVFLSHADRK 94 (405)
T ss_dssp CHHHHEECSSCCCC-----EEEEEEESSSSCCCCEEEEECSSSSCC--HHHHHHHHHHHHCCCTTBCCCCEEEEETTTTE
T ss_pred hhhhhhhhcCcEeeecCCeEEEEEEEccCCCCeEEEEEEECCCCCC--HHHHHHHHHHHhcCCCCeeeEeeEEecCCCCe
Confidence 344554455678999999999999965 5789999999765332 568899999999999999999999954 667
Q ss_pred eEEEEeccCCCChhHHHHhhcC----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe----cCCCCeEE
Q 003847 546 KLIIYDFVPNGSLANARYRKMG----SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL----GNDMEPKI 617 (791)
Q Consensus 546 ~~lv~e~~~~gsL~~~l~~~~~----~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl----~~~~~~kL 617 (791)
.++||||++ ++|.+++..... .....+++..++.|+.||+.||+|||+.||+||||||+|||+ +.++.+||
T Consensus 95 ~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl 173 (405)
T 3rgf_A 95 VWLLFDYAE-HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKI 173 (405)
T ss_dssp EEEEEECCS-EEHHHHHHHHHHHC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEE
T ss_pred EEEEEeCCC-CCHHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEE
Confidence 899999996 588887764321 112248999999999999999999999999999999999999 67889999
Q ss_pred eccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhH
Q 003847 618 GDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVY 696 (791)
Q Consensus 618 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvw 696 (791)
+|||+++........ .......+||+.|+|||++.+ ..++.++|||
T Consensus 174 ~Dfg~a~~~~~~~~~---------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Diw 220 (405)
T 3rgf_A 174 ADMGFARLFNSPLKP---------------------------------LADLDPVVVTFWYRAPELLLGARHYTKAIDIW 220 (405)
T ss_dssp CCTTCCC-------------------------------------------------CCCTTCCHHHHTTCCSCCHHHHHH
T ss_pred EECCCceecCCCCcc---------------------------------cccCCCceecCcccCchhhcCCCcccchhhhH
Confidence 999999876432110 011223569999999999987 4589999999
Q ss_pred HHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHh------------------------hhcCccc---hH---
Q 003847 697 SFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAA------------------------IRADFEG---KE--- 746 (791)
Q Consensus 697 SlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~---~~--- 746 (791)
||||++|||++|+.||....................++... ....+.. ..
T Consensus 221 SlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (405)
T 3rgf_A 221 AIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYME 300 (405)
T ss_dssp HHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCCCTTTCGGGGGSTTHHHHHHHCCGGGGTTCCHHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCCChhhcchhhcCcchhhhhhhccccCCCcchhhhhHh
Confidence 99999999999999996543211110000011111111100 0000000 00
Q ss_pred ----HHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 747 ----EALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 747 ----~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
.....+.+|+.+||..||++|||++|+++.
T Consensus 301 ~~~~~~~~~~~~Ll~~~L~~dP~~R~ta~e~L~h 334 (405)
T 3rgf_A 301 KHKVKPDSKAFHLLQKLLTMDPIKRITSEQAMQD 334 (405)
T ss_dssp TTTCCTTSHHHHHHHHHSCSSGGGSCCHHHHHTS
T ss_pred hcCCCCCHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 013467899999999999999999999974
No 141
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=100.00 E-value=6.3e-40 Score=373.20 Aligned_cols=250 Identities=16% Similarity=0.235 Sum_probs=202.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
..+||+|+||.||+|+. .+|+.||||++.... ....+.+.+|++++++++||||+++++++...+..|+||||++|
T Consensus 190 ~~~LG~G~fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~~~~~~l~lVmE~~~g 269 (543)
T 3c4z_A 190 FRVLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFETKTDLCLVMTIMNG 269 (543)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCTT
T ss_pred EEEEeeCCCeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEEeeCCEEEEEEEeccC
Confidence 46899999999999996 469999999996542 22346788999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++...... ...+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+.....
T Consensus 270 g~L~~~l~~~~~~-~~~l~e~~~~~~~~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~---- 344 (543)
T 3c4z_A 270 GDIRYHIYNVDED-NPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQT---- 344 (543)
T ss_dssp CBHHHHHHTSSTT-SCSCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCC----
T ss_pred CCHHHHHHHhhcc-cccccHHHHHHHHHHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCc----
Confidence 9999998765422 12499999999999999999999999999999999999999999999999999987643211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 345 --------------------------------~~~~~~GT~~Y~APE~l~~~~~~~~~DiwSlGvilyelltG~~PF~~~ 392 (543)
T 3c4z_A 345 --------------------------------KTKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRAR 392 (543)
T ss_dssp --------------------------------CBCCCCSCTTTSCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCSSCCT
T ss_pred --------------------------------ccccccCCccccChhhhcCCCCChHHhcCcchHHHHHHHhCCCCCCCC
Confidence 112346999999999999999999999999999999999999999654
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM-----KEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 775 (791)
..... ...+...........+...+..+.+++.+||+.||++||++ +++++
T Consensus 393 ~~~~~---------~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~a~ei~~ 448 (543)
T 3c4z_A 393 GEKVE---------NKELKQRVLEQAVTYPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRT 448 (543)
T ss_dssp TCCCC---------HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHSCSSGGGSCCCBTTBSHHHHT
T ss_pred ccchh---------HHHHHHHHhhcccCCCcccCHHHHHHHHHhccCCHhHCCCCcccCHHHHHc
Confidence 22111 11222222222222233356788999999999999999965 66664
No 142
>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}
Probab=100.00 E-value=7.5e-40 Score=345.71 Aligned_cols=247 Identities=22% Similarity=0.315 Sum_probs=192.6
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
..+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 26 ~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~~ 105 (285)
T 3is5_A 26 FKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGG 105 (285)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCSCC
T ss_pred ecceeccCCCeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHheecCCeEEEEEEeCCCC
Confidence 356899999999999995 568999999986643 334578999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe---cCCCCeEEeccCcccccCCCCCCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
+|.+++....... ..+++..++.|+.|++.||+|||+.||+||||||+||++ +.++.+||+|||++........
T Consensus 106 ~L~~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~-- 182 (285)
T 3is5_A 106 ELLERIVSAQARG-KALSEGYVAELMKQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH-- 182 (285)
T ss_dssp BHHHHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC--------
T ss_pred cHHHHHHhhhhcc-cCCCHHHHHHHHHHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCccc--
Confidence 9999886542111 249999999999999999999999999999999999999 4567899999999976543211
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....||+.|+|||++.+ .++.++||||||+++|||++|+.||.
T Consensus 183 -----------------------------------~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~il~~ll~g~~pf~ 226 (285)
T 3is5_A 183 -----------------------------------STNAAGTALYMAPEVFKR-DVTFKCDIWSAGVVMYFLLTGCLPFT 226 (285)
T ss_dssp ---------------------------------------CTTGGGCCHHHHTT-CCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred -----------------------------------CcCcccccCcCChHHhcc-CCCcccCeehHHHHHHHHHhCCCCCC
Confidence 113358999999999864 68999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
..... ......... ..... ........+.+++.+||+.||++|||+.|+++
T Consensus 227 ~~~~~----------~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 278 (285)
T 3is5_A 227 GTSLE----------EVQQKATYK-EPNYAVECRPLTPQAVDLLKQMLTKDPERRPSAAQVLH 278 (285)
T ss_dssp CSSHH----------HHHHHHHHC-CCCCCC--CCCCHHHHHHHHHHTCSCTTTSCCHHHHHT
T ss_pred CCCHH----------HHHhhhccC-CcccccccCcCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 53210 011100000 00111 00113467889999999999999999999985
No 143
>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=1.4e-40 Score=364.38 Aligned_cols=255 Identities=25% Similarity=0.340 Sum_probs=192.0
Q ss_pred cceeccccCceEEEEEEeC--C--CcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEc-cCceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVLE--D--GTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG-VDEKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~--~--g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-~~~~~lv~e~ 552 (791)
..+.||+|+||.||+|+.. + +..||||.+... .....+++.+|+.++++++||||+++++++.. .+..++||||
T Consensus 93 ~~~~LG~G~fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~~~~~~~~lv~e~ 172 (373)
T 3c1x_A 93 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 172 (373)
T ss_dssp EEEEEECCSSSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEECCCSSCCEEEEEC
T ss_pred cCcEeeeCCCeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCCCeEEEEEC
Confidence 4568999999999999853 2 246899999754 34456789999999999999999999998764 4578999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++|+|.+++..... .+++.++..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+......
T Consensus 173 ~~~g~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~ 248 (373)
T 3c1x_A 173 MKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFD 248 (373)
T ss_dssp CTTCBHHHHHHCTTC----CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC------------
T ss_pred CCCCCHHHHHhhccc----CCCHHHHHHHHHHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeeccccccccccccc
Confidence 999999999875432 3889999999999999999999999999999999999999999999999999866432211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~p 711 (791)
.. .......||+.|+|||++.+..++.++|||||||++|||+| |.+|
T Consensus 249 ~~--------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~ellt~~~~p 296 (373)
T 3c1x_A 249 SV--------------------------------HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 296 (373)
T ss_dssp -----------------------------------------CCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cc--------------------------------cccCCCCCcccccChHHhcCCCCCcHHHHHHHHHHHHHHHhCcCCC
Confidence 00 01122347888999999999999999999999999999999 5667
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
|.+...... ...+.... ....+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 297 ~~~~~~~~~---------~~~~~~~~---~~~~p~~~~~~l~~li~~cl~~dp~~RPs~~ell~~L~~i~ 354 (373)
T 3c1x_A 297 YPDVNTFDI---------TVYLLQGR---RLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIF 354 (373)
T ss_dssp CTTSCSSCH---------HHHHHTTC---CCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHH---------HHHHHcCC---CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 754322110 01111110 11111224567889999999999999999999999998864
No 144
>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}
Probab=100.00 E-value=2.2e-40 Score=356.97 Aligned_cols=267 Identities=22% Similarity=0.351 Sum_probs=206.2
Q ss_pred hcceeccccCceEEEEEEe-----CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccC--ceEEEE
Q 003847 478 ASAYILGASGSSIMYKAVL-----EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD--EKLIIY 550 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~-----~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lv~ 550 (791)
...+.||+|+||.||+++. .+++.||||++........+.+.+|++++++++||||+++++++...+ ..++||
T Consensus 44 ~~~~~lg~G~~g~V~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 123 (326)
T 2w1i_A 44 KFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 123 (326)
T ss_dssp EEEEEEECCSSEEEEEEEECTTSSSCCEEEEEEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----CCEEEE
T ss_pred eeeeeeccCCCeEEEEEEeccccCCCceEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEecCCCceEEEE
Confidence 3457899999999999983 468999999998876666788999999999999999999999987654 679999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+++++|.+++..... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++......
T Consensus 124 e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~ 199 (326)
T 2w1i_A 124 EYLPYGSLRDYLQKHKE----RIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDK 199 (326)
T ss_dssp CCCTTCBHHHHHHHSTT----SSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSC
T ss_pred ECCCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccc
Confidence 99999999999976542 38999999999999999999999999999999999999999999999999998765332
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.... ......++..|+|||++.+..++.++||||||+++|||+||..
T Consensus 200 ~~~~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~tg~~ 246 (326)
T 2w1i_A 200 EYYK---------------------------------VKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIE 246 (326)
T ss_dssp SEEE---------------------------------CSSCCSCCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHHTTC
T ss_pred cccc---------------------------------cccCCCCceeEECchhhcCCCCCchhhHHHHHHHHHHHHhcCC
Confidence 1100 0112237788999999998889999999999999999999999
Q ss_pred chhccccCCCCc---chhchhHHHHHHHHhhh-cCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 711 IVVDELGQGNGL---LVEDKNRAIRLADAAIR-ADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 711 pf~~~~~~~~~~---~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
||.......... ..........+.+.... ...+.....+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~Rps~~el~~~L~~l~ 321 (326)
T 2w1i_A 247 KSKSPPAEFMRMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRVDQIR 321 (326)
T ss_dssp GGGSHHHHHHHHHCTTCCTHHHHHHHHHHHHTTCCCCCCTTCCHHHHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHhhccccchhhhHHHHHHHhhcCCCCCCCCcccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 875421100000 00000001111111111 111122234567899999999999999999999999998764
No 145
>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}
Probab=100.00 E-value=6.5e-40 Score=381.77 Aligned_cols=250 Identities=23% Similarity=0.328 Sum_probs=198.8
Q ss_pred eeccccCceEEEEEEeC---CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 481 YILGASGSSIMYKAVLE---DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~---~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
..||+|+||.||+|... ++..||||+++... ....+++.+|+++|++++|||||++++++.. +..++||||+++|
T Consensus 342 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~~-~~~~lv~E~~~~g 420 (613)
T 2ozo_A 342 IELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQA-EALMLVMEMAGGG 420 (613)
T ss_dssp EEEEECSSSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEES-SSEEEEEECCTTC
T ss_pred cEEecCCCcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEecc-CCeEEEEEeCCCC
Confidence 36999999999999853 56789999998653 3356789999999999999999999999976 5689999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++..... .+++..+..|+.||+.||+|||+++|+||||||+|||++.++.+||+|||+++.+........
T Consensus 421 ~L~~~l~~~~~----~l~~~~~~~i~~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~-- 494 (613)
T 2ozo_A 421 PLHKFLVGKRE----EIPVSNVAELLHQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT-- 494 (613)
T ss_dssp BHHHHHTTCTT----TSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC---------
T ss_pred cHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceee--
Confidence 99999865432 499999999999999999999999999999999999999999999999999987643221100
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~ 715 (791)
......+|+.|+|||++.+..++.++|||||||++|||++ |+.||.+.
T Consensus 495 -------------------------------~~~~~~~~~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~~ 543 (613)
T 2ozo_A 495 -------------------------------ARSAGKWPLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKM 543 (613)
T ss_dssp --------------------------------------CCTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCTTTTC
T ss_pred -------------------------------eccCCCCccceeCHhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence 0112236688999999998899999999999999999998 99999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
... .....+..... ...+...+..+.+|+.+||+.||++||++.+|++.|+.+
T Consensus 544 ~~~----------~~~~~i~~~~~--~~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 596 (613)
T 2ozo_A 544 KGP----------EVMAFIEQGKR--MECPPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRAC 596 (613)
T ss_dssp CSH----------HHHHHHHTTCC--CCCCTTCCHHHHHHHHHTTCSSTTTSCCHHHHHHHHHHH
T ss_pred CHH----------HHHHHHHcCCC--CCCCCcCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHH
Confidence 211 11111111111 122223567889999999999999999999999999875
No 146
>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.5e-40 Score=347.98 Aligned_cols=243 Identities=20% Similarity=0.319 Sum_probs=179.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch---hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV---DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||+|+. .+|+.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||+++
T Consensus 16 ~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (278)
T 3cok_A 16 GNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHN 95 (278)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred eeeecCCCceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEEccCCeEEEEEecCCC
Confidence 46899999999999995 5799999999965421 2246789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++..... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 96 ~~L~~~l~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~---- 167 (278)
T 3cok_A 96 GEMNRYLKNRVK----PFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHE---- 167 (278)
T ss_dssp EEHHHHHHTCSS----CCCHHHHHHHHHHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC--------
T ss_pred CcHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCC----
Confidence 999999876432 489999999999999999999999999999999999999999999999999986542211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+..++.++||||||+++|||++|+.||...
T Consensus 168 --------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 215 (278)
T 3cok_A 168 --------------------------------KHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPFDTD 215 (278)
T ss_dssp --------------------------------------------------------CTHHHHHHHHHHHHHHSSCSSCCC
T ss_pred --------------------------------cceeccCCCCcCCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCh
Confidence 011235899999999999988999999999999999999999999654
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
....... .........+......+.+++.+||+.||++|||++|+++
T Consensus 216 ~~~~~~~-------------~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 262 (278)
T 3cok_A 216 TVKNTLN-------------KVVLADYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLD 262 (278)
T ss_dssp SCC------------------CCSSCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred hHHHHHH-------------HHhhcccCCccccCHHHHHHHHHHcccCHhhCCCHHHHhc
Confidence 2211100 0011111111224467889999999999999999999986
No 147
>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*
Probab=100.00 E-value=4.8e-40 Score=383.85 Aligned_cols=249 Identities=22% Similarity=0.301 Sum_probs=199.0
Q ss_pred eeccccCceEEEEEEe---CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 481 YILGASGSSIMYKAVL---EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~---~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
+.||+|+||.||+|.+ .+++.||||+++... ....+++.+|++++++++|||||++++++.. +..++||||+++
T Consensus 375 ~~LG~G~fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~~~-~~~~lv~E~~~~ 453 (635)
T 4fl3_A 375 KELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGICEA-ESWMLVMEMAEL 453 (635)
T ss_dssp EEEEECSSEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEEES-SSEEEEEECCTT
T ss_pred CEeccCCCEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec-CCEEEEEEccCC
Confidence 5799999999999964 356899999997643 2335789999999999999999999999864 568999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
|+|.+++.... .+++..++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+........
T Consensus 454 g~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~- 527 (635)
T 4fl3_A 454 GPLNKYLQQNR-----HVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYK- 527 (635)
T ss_dssp EEHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC-------
T ss_pred CCHHHHHhhCC-----CCCHHHHHHHHHHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccc-
Confidence 99999997643 389999999999999999999999999999999999999999999999999987654321110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~ 714 (791)
......||+.|+|||++.+..++.++|||||||++|||++ |+.||.+
T Consensus 528 --------------------------------~~~~~~~t~~y~APE~~~~~~~~~~sDvwSlGv~l~ellt~G~~Pf~~ 575 (635)
T 4fl3_A 528 --------------------------------AQTHGKWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRG 575 (635)
T ss_dssp ---------------------------------------CGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTTCCSSTT
T ss_pred --------------------------------cccCCCCceeeeChhhhcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 1112337788999999999999999999999999999998 9999965
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
... ......+...... ..+...+..+.+|+.+||+.||++||++.+|++.|+++
T Consensus 576 ~~~----------~~~~~~i~~~~~~--~~p~~~~~~l~~li~~cl~~dP~~RPs~~~l~~~L~~~ 629 (635)
T 4fl3_A 576 MKG----------SEVTAMLEKGERM--GCPAGCPREMYDLMNLCWTYDVENRPGFAAVELRLRNY 629 (635)
T ss_dssp CCH----------HHHHHHHHTTCCC--CCCTTCCHHHHHHHHHHTCSSTTTSCCHHHHHHHHHHH
T ss_pred CCH----------HHHHHHHHcCCCC--CCCCCCCHHHHHHHHHHcCCCHhHCcCHHHHHHHHHHH
Confidence 321 1112222221111 12223567889999999999999999999999999864
No 148
>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...
Probab=100.00 E-value=7.7e-40 Score=347.86 Aligned_cols=256 Identities=25% Similarity=0.334 Sum_probs=198.7
Q ss_pred cceeccccCceEEEEEEeCC----CcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEE-ccCceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVLED----GTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYW-GVDEKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~----g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~-~~~~~~lv~e~ 552 (791)
..+.||+|+||.||+|+..+ ...||||.+... .....+.+.+|++++++++||||+++++++. .++..++||||
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~v~e~ 108 (298)
T 3f66_A 29 FNEVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLRSEGSPLVVLPY 108 (298)
T ss_dssp EEEEEEEETTEEEEEEEEC-----CEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEECCSSSCCEEEEEC
T ss_pred hcceeeecCCceEEEEEEecCCCceeEEEEEecccCCCHHHHHHHHHHHHHHHhCCCCCEeeeeeEEEcCCCceEEEEeC
Confidence 45789999999999998532 246899998764 3445578999999999999999999999865 45678999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++|+|.+++..... .+++..+..|+.|++.||+|||+.||+||||||+||+++.++.+||+|||+++........
T Consensus 109 ~~~~~L~~~l~~~~~----~~~~~~~~~i~~ql~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 184 (298)
T 3f66_A 109 MKHGDLRNFIRNETH----NPTVKDLIGFGLQVAKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYY 184 (298)
T ss_dssp CTTCBHHHHHHCTTC----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGC
T ss_pred CCCCCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchh
Confidence 999999999875432 3899999999999999999999999999999999999999999999999999876432211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc-c
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV-I 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~-p 711 (791)
.. .......||+.|+|||.+.+..++.++||||||+++|||++|.. |
T Consensus 185 ~~--------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~~~~~ 232 (298)
T 3f66_A 185 SV--------------------------------HNKTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPP 232 (298)
T ss_dssp BC-------------------------------------CCBCGGGSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCS
T ss_pred cc--------------------------------ccccCCCCCccccChHHhcCCCCChHHHHHHHHHHHHHHHhCCCCC
Confidence 00 11223447889999999999899999999999999999999554 5
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
|....... ......... .. ......+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 233 ~~~~~~~~---------~~~~~~~~~-~~--~~~~~~~~~l~~li~~~l~~~p~~Rps~~ell~~L~~~~~ 291 (298)
T 3f66_A 233 YPDVNTFD---------ITVYLLQGR-RL--LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFS 291 (298)
T ss_dssp STTSCTTT---------HHHHHHTTC-CC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHHH
T ss_pred CccCCHHH---------HHHHHhcCC-CC--CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHH
Confidence 54332110 011111110 11 1111234678899999999999999999999999988754
No 149
>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}
Probab=100.00 E-value=1.5e-39 Score=348.94 Aligned_cols=270 Identities=22% Similarity=0.285 Sum_probs=204.9
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEc----cCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG----VDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lv~e~~ 553 (791)
..+.||+|+||.||+++. .+++.||||++........+.+.+|++++++++||||+++++++.. ....++||||+
T Consensus 33 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~~ 112 (317)
T 2buj_A 33 FIQKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRERGAKHEAWLLLPFF 112 (317)
T ss_dssp EEEEEEC--CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEEETTEEEEEEEEECC
T ss_pred EEEEecCCCCeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEeccCCCceeEEEEEeC
Confidence 356899999999999995 6799999999977666667889999999999999999999999873 34779999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++....... ..+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||++..........
T Consensus 113 ~~~~L~~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~ 191 (317)
T 2buj_A 113 KRGTLWNEIERLKDKG-NFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGS 191 (317)
T ss_dssp TTCBHHHHHHHHHTTT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESH
T ss_pred CCCcHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhcccccccc
Confidence 9999999988643221 259999999999999999999999999999999999999999999999999987643211000
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC---CCCchhhHHHHHHHHHHHhCCc
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK---PNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~---~~~~sDvwSlGvil~elltG~~ 710 (791)
... .. ........||+.|+|||++.+.. ++.++||||||+++|||++|+.
T Consensus 192 ~~~----------~~-----------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~ 244 (317)
T 2buj_A 192 RQA----------LT-----------------LQDWAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEG 244 (317)
T ss_dssp HHH----------HH-----------------HHHHHHHHSCGGGCCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSC
T ss_pred ccc----------cc-----------------ccccccccCCcccCCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCC
Confidence 000 00 00000123788999999987544 6899999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCCCC
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSPSP 786 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~~p 786 (791)
||........ .......... ..+........+.+++.+||+.||++|||+.|+++.|+.+.....+
T Consensus 245 p~~~~~~~~~--------~~~~~~~~~~--~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~L~~~~~~~~~ 310 (317)
T 2buj_A 245 PYDMVFQKGD--------SVALAVQNQL--SIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQPPAPG 310 (317)
T ss_dssp TTHHHHHTTS--------CHHHHHHCC----CCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHTCCCCCC
T ss_pred Chhhhhcccc--------hhhHHhhccC--CCCccccCCHHHHHHHHHHhhcChhhCCCHHHHHHHhhhcCCCCCC
Confidence 9864321110 0011111111 1111122456788999999999999999999999999999766543
No 150
>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*
Probab=100.00 E-value=3.5e-40 Score=356.37 Aligned_cols=258 Identities=24% Similarity=0.328 Sum_probs=204.5
Q ss_pred cceeccccCceEEEEEEeCC-C-----cEEEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEE
Q 003847 479 SAYILGASGSSIMYKAVLED-G-----TALAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~-g-----~~vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
..+.||+|+||.||+|.... + ..||||.+... .....+.+.+|+++++++ +||||+++++++...+..++||
T Consensus 50 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~ 129 (333)
T 2i1m_A 50 FGKTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVIT 129 (333)
T ss_dssp EEEEEEECSSEEEEEEEETTCSSSCCCCEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeEeccCCCcceEEEEecCCCcccchhHHHHHhcccccChHHHHHHHHHHHHHHhhcCCCCeeeEEEEEecCCceEEEE
Confidence 45789999999999999532 2 48999999765 334457799999999999 8999999999999999999999
Q ss_pred eccCCCChhHHHHhhcCC---------CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccC
Q 003847 551 DFVPNGSLANARYRKMGS---------SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~---------~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFG 621 (791)
||+++|+|.+++...... ....+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||
T Consensus 130 e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg 209 (333)
T 2i1m_A 130 EYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFG 209 (333)
T ss_dssp ECCTTEEHHHHHHHHHHHHSCC-------CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCG
T ss_pred ecCCCCcHHHHHHHhcccccccccccccccccCHHHHHHHHHHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccc
Confidence 999999999998765310 01248999999999999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHH
Q 003847 622 LERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVI 701 (791)
Q Consensus 622 la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvi 701 (791)
+++......... ......||+.|+|||++.+..++.++|||||||+
T Consensus 210 ~~~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~i 255 (333)
T 2i1m_A 210 LARDIMNDSNYI----------------------------------VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGIL 255 (333)
T ss_dssp GGCCGGGCTTSE----------------------------------ECSSCEECGGGSCHHHHHHCCCCHHHHHHHHHHH
T ss_pred ccccccccccee----------------------------------ecCCCCCCccccCHHHhccCCCChHHHHHHHHHH
Confidence 998654322110 0112337888999999998899999999999999
Q ss_pred HHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 702 LLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 702 l~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
+|||+| |..||.+.... ............... +...+..+.+++.+||+.||.+|||+.|+++.|+++
T Consensus 256 l~el~t~g~~p~~~~~~~---------~~~~~~~~~~~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~~ 324 (333)
T 2i1m_A 256 LWEIFSLGLNPYPGILVN---------SKFYKLVKDGYQMAQ--PAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQEQ 324 (333)
T ss_dssp HHHHTTTSCCSSTTCCSS---------HHHHHHHHHTCCCCC--CTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHH
T ss_pred HHHHHcCCCCCCcccchh---------HHHHHHHhcCCCCCC--CCCCCHHHHHHHHHHhccChhhCcCHHHHHHHHHHH
Confidence 999999 88898653211 111222222211111 112356788999999999999999999999999875
Q ss_pred C
Q 003847 781 P 781 (791)
Q Consensus 781 ~ 781 (791)
.
T Consensus 325 ~ 325 (333)
T 2i1m_A 325 A 325 (333)
T ss_dssp H
T ss_pred H
Confidence 3
No 151
>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.3e-40 Score=357.81 Aligned_cols=237 Identities=18% Similarity=0.273 Sum_probs=195.9
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCch--------hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEE
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENSV--------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 549 (791)
....||+|+||.||+|+ ..+++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++|
T Consensus 28 ~~~~lG~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~Iv~~~~~~~~~~~~~lv 107 (335)
T 3dls_A 28 TMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEHANIIKVLDIFENQGFFQLV 107 (335)
T ss_dssp EEEECSSSSSCSEEEEEETTTTEEEEEEEEESTTSCTTSEEEETTTEEEEHHHHHHTTCCCTTBCCEEEEEECSSEEEEE
T ss_pred EEeEEEecCCEEEEEEEECCCCcEEEEEEEehhhcccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEEeeCCEEEEE
Confidence 34689999999999999 45789999999975421 1234677899999999999999999999999999999
Q ss_pred EeccCCC-ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 550 YDFVPNG-SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 550 ~e~~~~g-sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
|||+.+| +|.+++.... .+++..+..|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++....
T Consensus 108 ~e~~~~g~~l~~~~~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~ 182 (335)
T 3dls_A 108 MEKHGSGLDLFAFIDRHP-----RLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER 182 (335)
T ss_dssp EECCTTSCBHHHHHHTCC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCT
T ss_pred EEeCCCCccHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCC
Confidence 9999777 9999887653 399999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHh
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLT 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~ellt 707 (791)
... ....+||+.|+|||++.+..+ +.++|||||||++|||++
T Consensus 183 ~~~-------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~ 225 (335)
T 3dls_A 183 GKL-------------------------------------FYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVF 225 (335)
T ss_dssp TCC-------------------------------------BCEECSCGGGCCHHHHTTCCBCSHHHHHHHHHHHHHHHHH
T ss_pred CCc-------------------------------------eeccCCCccccChhhhcCCCCCCCcccchhHHHHHHHHHh
Confidence 211 112458999999999988776 789999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|+.||....... . .....+......+.+|+.+||+.||++|||+.|+++.
T Consensus 226 g~~pf~~~~~~~---------------~----~~~~~~~~~~~~l~~li~~~L~~dP~~Rps~~ell~h 275 (335)
T 3dls_A 226 EENPFCELEETV---------------E----AAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTD 275 (335)
T ss_dssp SSCSCSSGGGGT---------------T----TCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHHC
T ss_pred CCCchhhHHHHH---------------h----hccCCCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 999996521110 0 0001111134568899999999999999999999985
No 152
>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*
Probab=100.00 E-value=1.4e-39 Score=366.78 Aligned_cols=253 Identities=18% Similarity=0.218 Sum_probs=188.7
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceEEE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv 549 (791)
..+.||+|+||.||+|.. .+|+.||||++... .....+++.+|+++++.++||||+++++++...+ ..|+|
T Consensus 66 ~~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv 145 (464)
T 3ttj_A 66 NLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLV 145 (464)
T ss_dssp EEEEEEECSSCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCCSTTTCCEEEEE
T ss_pred EEEEeecCCCeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCCccccCCeEEEE
Confidence 346899999999999984 56899999999754 3444577889999999999999999999997653 56999
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
|||+++ +|.+.+.. .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 146 ~E~~~~-~l~~~~~~-------~l~~~~~~~~~~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~ 217 (464)
T 3ttj_A 146 MELMDA-NLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTS 217 (464)
T ss_dssp EECCSE-EHHHHHTS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----C
T ss_pred EeCCCC-CHHHHHhh-------cCCHHHHHHHHHHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCC
Confidence 999975 46555532 2899999999999999999999999999999999999999999999999999865421
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
. .....+||+.|+|||++.+..|+.++|||||||++|||++|+
T Consensus 218 ~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~ 260 (464)
T 3ttj_A 218 F-------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260 (464)
T ss_dssp C-------------------------------------CC----CCCTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSS
T ss_pred c-------------------------------------ccCCCcccccccCHHHHcCCCCCHHHHHHHHHHHHHHHHhCC
Confidence 1 122356999999999999999999999999999999999999
Q ss_pred cchhccccCCCCc------------chhch-hHHHHHHHH---------------h-hhcCccchHHHHHHHHHHHhhcc
Q 003847 710 VIVVDELGQGNGL------------LVEDK-NRAIRLADA---------------A-IRADFEGKEEALLSCFKLGYSCA 760 (791)
Q Consensus 710 ~pf~~~~~~~~~~------------~~~~~-~~~~~~~~~---------------~-~~~~~~~~~~~~~~l~~li~~cl 760 (791)
.||.+........ ..... ......... . ..............+.+|+.+||
T Consensus 261 ~pF~g~~~~~~~~~i~~~lg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~dLl~~mL 340 (464)
T 3ttj_A 261 ILFPGRDYIDQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKML 340 (464)
T ss_dssp CSSCCSSHHHHHHHHHHHHCSCCHHHHTTSCHHHHHHHTTSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHS
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCHHHHHHcchhhhhHhhcccccCCCChHHhCcccccccccccccccCHHHHHHHHHHc
Confidence 9996532100000 00000 000000000 0 00000011123567899999999
Q ss_pred CCCCCCCCCHHHHHHH
Q 003847 761 SPLPQKRPSMKEALQA 776 (791)
Q Consensus 761 ~~dP~~RPs~~evl~~ 776 (791)
..||++|||++|+++.
T Consensus 341 ~~dP~~R~ta~e~L~H 356 (464)
T 3ttj_A 341 VIDPAKRISVDDALQH 356 (464)
T ss_dssp CSSTTTSCCHHHHHTS
T ss_pred CCChhhCCCHHHHhcC
Confidence 9999999999999874
No 153
>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...
Probab=100.00 E-value=1.2e-39 Score=343.97 Aligned_cols=241 Identities=20% Similarity=0.286 Sum_probs=198.9
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||++
T Consensus 18 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 97 (284)
T 2vgo_A 18 IGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFHDRKRIYLMLEFAP 97 (284)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCT
T ss_pred eeheecCCCCeEEEEEEEcCCCcEEEEEEEcccccchHHHHHHHHHHHHHHhcCCCCCEeeEEEEEEcCCEEEEEEEeCC
Confidence 3568999999999999954 68899999986532 2224678999999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+++|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 98 ~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~---- 168 (284)
T 2vgo_A 98 RGELYKELQKHG-----RFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLR---- 168 (284)
T ss_dssp TEEHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSC----
T ss_pred CCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccc----
Confidence 999999988764 38999999999999999999999999999999999999999999999999987543211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||..
T Consensus 169 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 214 (284)
T 2vgo_A 169 ----------------------------------RRTMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFDS 214 (284)
T ss_dssp ----------------------------------BCCCCSCGGGCCHHHHTTCCBCTTHHHHHHHHHHHHHHHSSCTTCC
T ss_pred ----------------------------------cccccCCCCcCCHHHhccCCCCcccchhhHHHHHHHHHHCCCCCCC
Confidence 1123589999999999998999999999999999999999999964
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... .+............+......+.+++.+||+.||++||+++|+++
T Consensus 215 ~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~ 262 (284)
T 2vgo_A 215 PSH-------------TETHRRIVNVDLKFPPFLSDGSKDLISKLLRYHPPQRLPLKGVME 262 (284)
T ss_dssp SSH-------------HHHHHHHHTTCCCCCTTSCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCH-------------hHHHHHHhccccCCCCcCCHHHHHHHHHHhhcCHhhCCCHHHHhh
Confidence 311 011111111222222224567889999999999999999999986
No 154
>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...
Probab=100.00 E-value=1e-39 Score=351.02 Aligned_cols=258 Identities=22% Similarity=0.304 Sum_probs=205.0
Q ss_pred hcceeccccCceEEEEEEeC------CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEE
Q 003847 478 ASAYILGASGSSIMYKAVLE------DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~------~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
...+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..++||
T Consensus 28 ~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 107 (322)
T 1p4o_A 28 TMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIM 107 (322)
T ss_dssp EEEEEEEECSSSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEECSSSSCEEEE
T ss_pred eeeeEeccCCceEEEeeeecCccCCCCceEEEEEecccccCHHHHHHHHHHHHHHHhcCCCCEeeeEEEEccCCccEEEE
Confidence 34578999999999999853 47899999997643 334567899999999999999999999999999999999
Q ss_pred eccCCCChhHHHHhhcC-----CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 551 DFVPNGSLANARYRKMG-----SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~-----~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
||+++|+|.+++..... .....+++..++.++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++.
T Consensus 108 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~ 187 (322)
T 1p4o_A 108 ELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRD 187 (322)
T ss_dssp ECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCG
T ss_pred EeCCCCcHHHHHHHhchhhccCCCCCCcCHHHHHHHHHHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccc
Confidence 99999999999876431 1112479999999999999999999999999999999999999999999999999986
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLEL 705 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~el 705 (791)
........ ......||+.|+|||++.+..++.++||||||+++|||
T Consensus 188 ~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el 233 (322)
T 1p4o_A 188 IYETDYYR----------------------------------KGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEI 233 (322)
T ss_dssp GGGGGCEE----------------------------------GGGSSEECGGGCCHHHHHHCCCCHHHHHHHHHHHHHHH
T ss_pred cccccccc----------------------------------cccCCCCCCCccChhhhccCCCCchhhHHHHHHHHHHH
Confidence 54221100 00122368889999999988999999999999999999
Q ss_pred Hh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcC-ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCC
Q 003847 706 LT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRAD-FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 706 lt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~ 782 (791)
++ |+.||..... ........... .......+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 234 ~~~g~~p~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~e~l~~L~~~~~ 299 (322)
T 1p4o_A 234 ATLAEQPYQGLSN-------------EQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIKEEME 299 (322)
T ss_dssp HHTSCCTTTTSCH-------------HHHHHHHHTTCCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHGGGSC
T ss_pred HhcCCCccccCCH-------------HHHHHHHHcCCcCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHhhc
Confidence 99 7888854311 11111111111 11122245678899999999999999999999999988744
No 155
>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A
Probab=100.00 E-value=4.5e-40 Score=356.21 Aligned_cols=242 Identities=18% Similarity=0.275 Sum_probs=194.0
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
..+.||+|+||.||+|.. .+|+.||||++..... ...+|++++.++ +||||+++++++.+.+..|+||||+++|
T Consensus 26 ~~~~lG~G~~g~V~~~~~~~~~~~~avK~~~~~~~----~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~gg 101 (342)
T 2qr7_A 26 VKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKR----DPTEEIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG 101 (342)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEETTTC----CCHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred EEEEEeeCCCEEEEEEEECCCCCEEEEEEEEcccC----ChHHHHHHHHHhcCCCCcCeEEEEEEcCCEEEEEEeCCCCC
Confidence 346899999999999995 4689999999976533 235688888888 7999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC----CCeEEeccCcccccCCCCCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND----MEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~----~~~kL~DFGla~~~~~~~~~ 632 (791)
+|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||+..+ +.+||+|||+++.......
T Consensus 102 ~L~~~i~~~~-----~~~~~~~~~~~~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~- 175 (342)
T 2qr7_A 102 ELLDKILRQK-----FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENG- 175 (342)
T ss_dssp BHHHHHHTCT-----TCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTC-
T ss_pred cHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCC-
Confidence 9999887653 38999999999999999999999999999999999998533 3599999999987643211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
.....+||+.|+|||++.+..++.++|||||||++|||++|+.||
T Consensus 176 -----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~g~~Pf 220 (342)
T 2qr7_A 176 -----------------------------------LLMTPCYTANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPF 220 (342)
T ss_dssp -----------------------------------CBCCSSCCSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCSS
T ss_pred -----------------------------------ceeccCCCccccCHHHhcCCCCCCccCeeeHhHHHHHHhcCCCCC
Confidence 112345899999999998888899999999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccc----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEG----KEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
...... ...++......+.+.. ....+..+.+|+.+||..||++||++.|+++
T Consensus 221 ~~~~~~----------~~~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dP~~R~t~~~il~ 277 (342)
T 2qr7_A 221 ANGPDD----------TPEEILARIGSGKFSLSGGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLR 277 (342)
T ss_dssp CSSTTS----------CHHHHHHHHHHCCCCCCSTTTTTSCHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred CCCCcC----------CHHHHHHHHccCCcccCccccccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 653211 0112222222222211 1224567889999999999999999999986
No 156
>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*
Probab=100.00 E-value=1.5e-39 Score=348.27 Aligned_cols=260 Identities=24% Similarity=0.357 Sum_probs=195.1
Q ss_pred hhhcceeccccCceEEEEEEeC----CCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCc----
Q 003847 476 LKASAYILGASGSSIMYKAVLE----DGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE---- 545 (791)
Q Consensus 476 ~~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~---- 545 (791)
.+...+.||+|+||.||+|... +++.||||++... .....+.+.+|++++++++||||+++++++...+.
T Consensus 35 ~y~~~~~lg~G~~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 114 (313)
T 3brb_A 35 LLILGKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRLLGVCIEMSSQGIP 114 (313)
T ss_dssp GEEEEEEEEC-CCCCEEEEEEECTTSCEEEEEEEEC---CCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC-------
T ss_pred HeeeccceeecCCeEEEEEEEeccCCceeEEEEEEEeccccchhHHHHHHHHHHHHhcCCCCCeeeeeEEEeeccccCCc
Confidence 3445678999999999999843 3568999999754 33445779999999999999999999999987653
Q ss_pred -eEEEEeccCCCChhHHHHhhcC-CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcc
Q 003847 546 -KLIIYDFVPNGSLANARYRKMG-SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE 623 (791)
Q Consensus 546 -~~lv~e~~~~gsL~~~l~~~~~-~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla 623 (791)
.++||||+++++|.+++..... .....+++..++.|+.||+.||+|||+.||+||||||+||+++.++.+||+|||++
T Consensus 115 ~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~ 194 (313)
T 3brb_A 115 KPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLS 194 (313)
T ss_dssp CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHHHHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC
T ss_pred ccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcc
Confidence 4999999999999999864321 22235999999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ 703 (791)
+......... ......+++.|+|||.+.+..++.++||||||+++|
T Consensus 195 ~~~~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ 240 (313)
T 3brb_A 195 KKIYSGDYYR----------------------------------QGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMW 240 (313)
T ss_dssp --------------------------------------------------CCGGGSCHHHHHSSCCCHHHHHHHHHHHHH
T ss_pred eecccccccC----------------------------------cccccCCCccccCchhhcCCCccchhhhHHHHHHHH
Confidence 8664321100 011234788899999999999999999999999999
Q ss_pred HHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 704 ELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 704 ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
||++ |+.||...... .....+... .. .......+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 241 el~~~g~~p~~~~~~~---------~~~~~~~~~-~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~L~~l~ 307 (313)
T 3brb_A 241 EIATRGMTPYPGVQNH---------EMYDYLLHG-HR--LKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLL 307 (313)
T ss_dssp HHHTTSCCSSTTCCGG---------GHHHHHHTT-CC--CCCBTTCCHHHHHHHHHTTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHhcCCCCCccCCHH---------HHHHHHHcC-CC--CCCCccccHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHH
Confidence 9999 88888653211 011111111 11 1112234567899999999999999999999999998764
No 157
>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A
Probab=100.00 E-value=2e-39 Score=344.06 Aligned_cols=261 Identities=15% Similarity=0.167 Sum_probs=201.1
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEE-EccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY-WGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lv~e~~~~g 556 (791)
..+.||+|+||.||+|+. .+++.||||++..... .+.+.+|++++++++|++++..+.++ ...+..++||||+ ++
T Consensus 13 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~ 89 (296)
T 4hgt_A 13 LGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GP 89 (296)
T ss_dssp EEEEEEECSSSEEEEEEETTTTEEEEEEEEEC-----CCCHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CC
T ss_pred EeeeecCCCCeEEEEEEEcCCCceEEEEeeccccc--chHHHHHHHHHHHhcCCCCCCeeeeecCCCCceEEEEEcc-CC
Confidence 356899999999999995 6789999998755432 24578899999999988877776665 5566779999999 99
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe---cCCCCeEEeccCcccccCCCCCCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
+|.+++..... .+++..+..++.|++.||+|||+.||+||||||+|||+ +.++.+||+|||+++.........
T Consensus 90 ~L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~ 165 (296)
T 4hgt_A 90 SLEDLFNFCSR----KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQ 165 (296)
T ss_dssp BHHHHHHHTTS----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCC
T ss_pred CHHHHHHHhcC----CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCc
Confidence 99999875432 39999999999999999999999999999999999999 788999999999998765432211
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.. +........||+.|+|||++.+..++.++|||||||++|||++|+.||.
T Consensus 166 ~~-----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~ 216 (296)
T 4hgt_A 166 HI-----------------------------PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQ 216 (296)
T ss_dssp BC-----------------------------CCCCSCCCCSCGGGCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTS
T ss_pred cC-----------------------------CCCcccccCCCccccchHHhcCCCCCchhHHHHHHHHHHHHhcCCCCCc
Confidence 10 0112234569999999999999999999999999999999999999997
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
............ .+.......... .....+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 217 ~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~~~ 279 (296)
T 4hgt_A 217 GLKAATKRQKYE------RISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp SCCCSSSSSHHH------HHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred ccchhhhhhhhh------hhhcccccchhhhhhccCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHH
Confidence 643332222211 111111111100 00112467889999999999999999999999998864
No 158
>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...
Probab=100.00 E-value=1.8e-39 Score=342.21 Aligned_cols=242 Identities=21% Similarity=0.311 Sum_probs=196.6
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCch------hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENSV------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
..+.||+|+||.||+|+.. +|+.||||+++.... ...+.+.+|++++++++||||+++++++...+..++|||
T Consensus 9 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 88 (283)
T 3bhy_A 9 MGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIFENKTDVVLILE 88 (283)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEEE
T ss_pred hHHhhcccCceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhheecCCCeEEEEEe
Confidence 3568999999999999965 689999999865321 135789999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC----CeEEeccCcccccC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM----EPKIGDFGLERLVT 627 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~----~~kL~DFGla~~~~ 627 (791)
|+++++|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++ .+||+|||++....
T Consensus 89 ~~~~~~L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~ 163 (283)
T 3bhy_A 89 LVSGGELFDFLAEKE-----SLTEDEATQFLKQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE 163 (283)
T ss_dssp CCCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC
T ss_pred ecCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceecc
Confidence 999999999997654 389999999999999999999999999999999999998877 79999999998654
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt 707 (791)
.... .....||+.|+|||++.+..++.++||||||+++|||++
T Consensus 164 ~~~~-------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~ 206 (283)
T 3bhy_A 164 AGNE-------------------------------------FKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLS 206 (283)
T ss_dssp ---------------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHH
T ss_pred CCCc-------------------------------------ccccCCCcCccCcceecCCCCCcchhhhhHHHHHHHHHH
Confidence 2211 112348999999999999899999999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
|+.||...... +............. ...+..+.+++.+||+.||++||++.|+++
T Consensus 207 g~~p~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~~l~ 265 (283)
T 3bhy_A 207 GASPFLGETKQ-------------ETLTNISAVNYDFDEEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLE 265 (283)
T ss_dssp SSCTTCCSSHH-------------HHHHHHHTTCCCCCHHHHTTCCHHHHHHHHTTSCSSGGGSCCHHHHHH
T ss_pred CCCCCCCcchH-------------HHHHHhHhcccCCcchhcccCCHHHHHHHHHHccCCHhHCcCHHHHHh
Confidence 99999653210 11111111111111 113456889999999999999999999997
No 159
>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}
Probab=100.00 E-value=1.4e-39 Score=345.13 Aligned_cols=248 Identities=23% Similarity=0.311 Sum_probs=197.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
..+||+|+||.||+|.. .+++.||||.+........+.+.+|+.++++++||||+++++++...+..++||||+++++|
T Consensus 27 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 106 (295)
T 2clq_A 27 RVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSL 106 (295)
T ss_dssp BCEEEECSSSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCSEEEH
T ss_pred cEEEeecCcEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEEEeCCcEEEEEEeCCCCCH
Confidence 45899999999999994 56899999999776655667899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-CCCeEEeccCcccccCCCCCCCcCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-DMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
.+++...... ..+++..+..++.|++.||+|||+.||+||||||+||+++. ++.+||+|||++........
T Consensus 107 ~~~l~~~~~~--~~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~------ 178 (295)
T 2clq_A 107 SALLRSKWGP--LKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINP------ 178 (295)
T ss_dssp HHHHHHTTCC--CTTCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC---------
T ss_pred HHHHHhhccC--CCccHHHHHHHHHHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCC------
Confidence 9998765432 23778999999999999999999999999999999999987 89999999999986542110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC--CCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK--PNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~--~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+.. ++.++||||||+++|||++|+.||...
T Consensus 179 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (295)
T 2clq_A 179 ------------------------------CTETFTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228 (295)
T ss_dssp --------------------------------CCCCCCGGGCCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred ------------------------------cccccCCCccccChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence 011335899999999997643 789999999999999999999999643
Q ss_pred ccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... .............. .........+.+++.+||+.||++||++.|+++
T Consensus 229 ~~~--------~~~~~~~~~~~~~~--~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 278 (295)
T 2clq_A 229 GEP--------QAAMFKVGMFKVHP--EIPESMSAEAKAFILKCFEPDPDKRACANDLLV 278 (295)
T ss_dssp SSH--------HHHHHHHHHHCCCC--CCCTTSCHHHHHHHHHTTCSSTTTSCCHHHHHT
T ss_pred Cch--------hHHHHhhccccccc--cccccCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 110 00001110111111 112224567889999999999999999999986
No 160
>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A
Probab=100.00 E-value=2.3e-39 Score=354.27 Aligned_cols=242 Identities=22% Similarity=0.355 Sum_probs=196.7
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--------hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEE
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENS--------VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~l 548 (791)
..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|+.+++++ +||||+++++++...+..++
T Consensus 98 ~~~~lg~G~~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~l 177 (365)
T 2y7j_A 98 PKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFL 177 (365)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEETTSSCCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEEBSSEEEE
T ss_pred cceEEecCCCEEEEEEEECCCCcEEEEEEEEccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeEEEEEEeeCCEEEE
Confidence 3478999999999999964 79999999986532 11245688999999999 79999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
||||+++++|.+++.... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||++..+..
T Consensus 178 v~e~~~g~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~ 252 (365)
T 2y7j_A 178 VFDLMRKGELFDYLTEKV-----ALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEP 252 (365)
T ss_dssp EECCCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEEeCCCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCC
Confidence 999999999999987654 399999999999999999999999999999999999999999999999999987643
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC------CCCCCchhhHHHHHHH
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS------IKPNPKWDVYSFGVIL 702 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~------~~~~~~sDvwSlGvil 702 (791)
... ....+||+.|+|||++.+ ..++.++|||||||++
T Consensus 253 ~~~-------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~il 295 (365)
T 2y7j_A 253 GEK-------------------------------------LRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295 (365)
T ss_dssp TCC-------------------------------------BCCCCSCGGGCCHHHHHHTTCTTSCCBCTTHHHHHHHHHH
T ss_pred Ccc-------------------------------------cccCCCCCCccChhhccccccccCcCCCchhhHHhHHHHH
Confidence 211 123459999999999863 3578999999999999
Q ss_pred HHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 703 LELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 703 ~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
|||++|+.||..... .........+..... ...+..+.+++.+||+.||++|||+.|+++
T Consensus 296 ~ell~g~~pf~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~ell~ 359 (365)
T 2y7j_A 296 FTLLAGSPPFWHRRQ-------------ILMLRMIMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQ 359 (365)
T ss_dssp HHHHHSSCSSCCSSH-------------HHHHHHHHHTCCCCCHHHHSSSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHHCCCCCCCCCH-------------HHHHHHHHhCCCCCCCcccccCCHHHHHHHHHHcCCChhHCcCHHHHhc
Confidence 999999999965311 111111111111111 113456889999999999999999999987
No 161
>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*
Probab=100.00 E-value=1.9e-39 Score=369.03 Aligned_cols=245 Identities=24% Similarity=0.299 Sum_probs=198.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|+||+||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++.+.+..++||||+++|
T Consensus 27 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~~ 106 (486)
T 3mwu_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (486)
T ss_dssp EEEEECCSSSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEeecCCEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEEEcCCEEEEEEEcCCCC
Confidence 46899999999999995 47899999998643 2223567899999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec---CCCCeEEeccCcccccCCCCCCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG---NDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~---~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
+|.+++.... .+++..+..|+.||+.||+|||+.||+||||||+|||++ .++.+||+|||+++......
T Consensus 107 ~L~~~~~~~~-----~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~--- 178 (486)
T 3mwu_A 107 ELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNT--- 178 (486)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----
T ss_pred cHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCC---
Confidence 9999887664 399999999999999999999999999999999999995 45679999999998654221
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||.
T Consensus 179 ----------------------------------~~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~pf~ 223 (486)
T 3mwu_A 179 ----------------------------------KMKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFY 223 (486)
T ss_dssp -------------------------------------CCTTGGGGCCGGGGGS-CCCHHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ----------------------------------ccCCCcCCCCCCCHHHhCC-CCCchhhHHHHHHHHHHHHhCCCCCC
Confidence 1123459999999999986 58999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
+... ......+.........+.....+..+.+++.+||+.||++|||+.|+++.
T Consensus 224 ~~~~---------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~~~l~h 277 (486)
T 3mwu_A 224 GKNE---------YDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEH 277 (486)
T ss_dssp CSSH---------HHHHHHHHHTCCCSCSGGGGGSCHHHHHHHHHHTCSSTTTSCCHHHHHHC
T ss_pred CCCH---------HHHHHHHHhCCCCCCCcccCCCCHHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 5321 11111111111111122223345678999999999999999999999974
No 162
>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A
Probab=100.00 E-value=3.3e-39 Score=342.49 Aligned_cols=260 Identities=14% Similarity=0.162 Sum_probs=201.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEE-EccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFY-WGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~-~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+. .+|+.||||++..... .+.+.+|++++++++|++++..+.++ ...+..++||||+ +++
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~--~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~~lv~e~~-~~~ 90 (296)
T 3uzp_A 14 GRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTK--HPQLHIESKIYKMMQGGVGIPTIRWCGAEGDYNVMVMELL-GPS 90 (296)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEEESCSS--CCHHHHHHHHHHHHTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEccCCCeEEEEEEEcCCCcEEEEEEecCCcc--hhHHHHHHHHHHHhhcCCCCCccccccCCCCceEEEEEec-CCC
Confidence 46899999999999995 6799999999865433 24688999999999988877666655 4556779999999 999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe---cCCCCeEEeccCcccccCCCCCCCc
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
|.+++..... .+++..+..++.|++.||+|||++||+||||||+|||+ +.++.+||+|||+++..........
T Consensus 91 L~~~~~~~~~----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~ 166 (296)
T 3uzp_A 91 LEDLFNFCSR----KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQH 166 (296)
T ss_dssp HHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB
T ss_pred HHHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccc
Confidence 9999875432 39999999999999999999999999999999999999 4888999999999987654322111
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
. +........||+.|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 167 ~-----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~ 217 (296)
T 3uzp_A 167 I-----------------------------PYRENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYFNLGSLPWQG 217 (296)
T ss_dssp C-----------------------------CCCCSCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred c-----------------------------ccccccccccccccCChhhhcCCCCCcchhhHHHHHHHHHHHhCCCCCCC
Confidence 0 01122345699999999999999999999999999999999999999976
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFE-GKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
.......... ..+.........+ .....+..+.+++.+||+.||++|||+.++++.|+++.
T Consensus 218 ~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~l~~~l~~~~ 279 (296)
T 3uzp_A 218 LKAATKRQKY------ERISEKKMSTPIEVLCKGYPSEFATYLNFCRSLRFDDKPDYSYLRQLFRNLF 279 (296)
T ss_dssp CCCSSSSSHH------HHHHHHHHHSCHHHHTTTSCHHHHHHHHHHHTSCTTCCCCHHHHHHHHHHHH
T ss_pred cCchhhhhhh------hhhcccccCCchHHHHhhCCHHHHHHHHHHHhcCcCcCCCHHHHHHHHHHHH
Confidence 4332222211 1111111111100 00113467889999999999999999999999998764
No 163
>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*
Probab=100.00 E-value=7.9e-40 Score=352.69 Aligned_cols=248 Identities=20% Similarity=0.299 Sum_probs=196.5
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS--VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++++ .||||+++++++...+..++||||+++
T Consensus 34 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~~~~~~~~lv~e~~~~ 113 (327)
T 3lm5_A 34 SKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVYENTSEIILILEYAAG 113 (327)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEEECCTT
T ss_pred cceeCCCCCeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEEEeCCeEEEEEEecCC
Confidence 478999999999999954 68999999997642 23357889999999999 469999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC---CCCeEEeccCcccccCCCCCC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---~~~~kL~DFGla~~~~~~~~~ 632 (791)
|+|.+++..... ..+++..++.|+.|++.||+|||+.||+||||||+|||++. ++.+||+|||+++.......
T Consensus 114 ~~L~~~~~~~~~---~~~~~~~~~~i~~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~- 189 (327)
T 3lm5_A 114 GEIFSLCLPELA---EMVSENDVIRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACE- 189 (327)
T ss_dssp EEGGGGGSSCC----CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC------
T ss_pred CcHHHHHHHhcc---cCCCHHHHHHHHHHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCccc-
Confidence 999998754322 24999999999999999999999999999999999999987 78999999999987642211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
.....||+.|+|||++.+..++.++||||||+++|||++|+.||
T Consensus 190 ------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~ll~g~~pf 233 (327)
T 3lm5_A 190 ------------------------------------LREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPF 233 (327)
T ss_dssp ----------------------------------------CCCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ------------------------------------cccccCCcCccCCeeecCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 11245899999999999999999999999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..... ......+..................+.+++.+||+.||++|||++|+++.
T Consensus 234 ~~~~~---------~~~~~~i~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~~ll~h 288 (327)
T 3lm5_A 234 VGEDN---------QETYLNISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSH 288 (327)
T ss_dssp CCSSH---------HHHHHHHHHTCCCCCTTTTTTSCHHHHHHHHHHSCSSGGGSCCHHHHTTC
T ss_pred CCCCc---------hHHHHHHHhcccccCchhhcccCHHHHHHHHHHcCCChhhCcCHHHHhCC
Confidence 55311 11111111111111111112245678899999999999999999999874
No 164
>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}
Probab=100.00 E-value=7.8e-40 Score=362.23 Aligned_cols=259 Identities=21% Similarity=0.257 Sum_probs=204.1
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccC--ceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD--EKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~--~~~lv~e~~~~ 555 (791)
.++||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+ ..++||||+++
T Consensus 14 ~~~LG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~lv~e~~~~ 93 (396)
T 4eut_A 14 SDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPC 93 (396)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEECTTTCCEEEEECCCTT
T ss_pred EEEEEcCCCeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeeccCCCCeeEEEEecCCC
Confidence 468999999999999954 58999999997643 233567889999999999999999999998765 67999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe----cCCCCeEEeccCcccccCCCCC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL----GNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl----~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+|.+++....... .+++..++.|+.||+.||+|||+.||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 94 g~L~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~ 171 (396)
T 4eut_A 94 GSLYTVLEEPSNAY--GLPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQ 171 (396)
T ss_dssp EEHHHHTTSGGGTT--CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGG
T ss_pred CCHHHHHHhhhccc--CCCHHHHHHHHHHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCc
Confidence 99999987654322 38999999999999999999999999999999999999 7778899999999987643211
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--------CCCCCchhhHHHHHHHH
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--------IKPNPKWDVYSFGVILL 703 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--------~~~~~~sDvwSlGvil~ 703 (791)
.....||+.|+|||++.+ ..++.++|||||||++|
T Consensus 172 -------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~ 214 (396)
T 4eut_A 172 -------------------------------------FVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFY 214 (396)
T ss_dssp -------------------------------------SSCSSSCCTTCCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------cccccCCccccCHHHhhccccccccccCCCcHHHHHHHHHHHH
Confidence 112458999999999865 56788999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHh---------------------hhcCccchHHHHHHHHHHHhhccCC
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAA---------------------IRADFEGKEEALLSCFKLGYSCASP 762 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~li~~cl~~ 762 (791)
||++|+.||......... ......+.... ..............+.+++.+||+.
T Consensus 215 el~tg~~Pf~~~~~~~~~-----~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~ll~~~L~~ 289 (396)
T 4eut_A 215 HAATGSLPFRPFEGPRRN-----KEVMYKIITGKPSGAISGVQKAENGPIDWSGDMPVSCSLSRGLQVLLTPVLANILEA 289 (396)
T ss_dssp HHHHSSCSEECTTCTTTC-----HHHHHHHHHSCCTTCCEEEECSTTCCEEEESSCCTTCSSCHHHHHHHHHHHHHHSCC
T ss_pred HHHHCCCCCCCCCcccch-----HHHHHHHhcCCCcccchhheeccCCCcccCccCCcccccchHHHhhchHHHHHhhcc
Confidence 999999999653221110 01111111110 0001112245677889999999999
Q ss_pred CCCCCCCHHHHHHHhccCCC
Q 003847 763 LPQKRPSMKEALQALEKIPS 782 (791)
Q Consensus 763 dP~~RPs~~evl~~L~~i~~ 782 (791)
||++||+++|+++.++++..
T Consensus 290 dP~~R~s~~e~l~~l~~il~ 309 (396)
T 4eut_A 290 DQEKCWGFDQFFAETSDILH 309 (396)
T ss_dssp CTTTSCCHHHHHHHHHHHHT
T ss_pred ChhhhccHHHHHHHHHHHhh
Confidence 99999999999999987643
No 165
>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=346.65 Aligned_cols=246 Identities=24% Similarity=0.262 Sum_probs=191.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-----hhhHHHHHHHHHHHhcc---CCCCccceeeEEEccC-----c
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-----VDRFRDFETQVRVIAKL---VHPNLVRIRGFYWGVD-----E 545 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-----~~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~~~~-----~ 545 (791)
...||+|+||.||+|+. .+++.||||++.... ......+.+|+++++++ +||||+++++++.... .
T Consensus 14 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~~~~~~~~ 93 (308)
T 3g33_A 14 VAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATSRTDREIK 93 (308)
T ss_dssp EEEECCSSSCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEECCSSSEEE
T ss_pred EEEEecCCCeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeeccCCCCcee
Confidence 46899999999999994 678999999986422 11124567777777766 4999999999998765 4
Q ss_pred eEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 546 KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 546 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
.++||||+. ++|.+++...... .+++..++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.
T Consensus 94 ~~lv~e~~~-~~L~~~~~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~ 169 (308)
T 3g33_A 94 VTLVFEHVD-QDLRTYLDKAPPP---GLPAETIKDLMRQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARI 169 (308)
T ss_dssp EEEEEECCC-CBHHHHHHTCCTT---CSCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTT
T ss_pred EEEEehhhh-cCHHHHHhhccCC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccc
Confidence 789999996 6999998765432 389999999999999999999999999999999999999999999999999976
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLEL 705 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~el 705 (791)
...... .....||+.|+|||++.+..++.++|||||||++|||
T Consensus 170 ~~~~~~-------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~~l 212 (308)
T 3g33_A 170 YSYQMA-------------------------------------LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEM 212 (308)
T ss_dssp STTCCC-------------------------------------SGGGGCCCSSCCHHHHHTSCCCSTHHHHHHHHHHHHT
T ss_pred cCCCcc-------------------------------------cCCccccccccCchHHcCCCCCchHHHHHHHHHHHHH
Confidence 532111 1234589999999999999999999999999999999
Q ss_pred HhCCcchhccccCCCCcchhchhHHHHHHHHhhh------------------cCcc-----chHHHHHHHHHHHhhccCC
Q 003847 706 LTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIR------------------ADFE-----GKEEALLSCFKLGYSCASP 762 (791)
Q Consensus 706 ltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~~-----~~~~~~~~l~~li~~cl~~ 762 (791)
++|+.||...... .....+.+.... .... ...+....+.+|+.+||+.
T Consensus 213 ~~g~~pf~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 283 (308)
T 3g33_A 213 FRRKPLFCGNSEA---------DQLGKIFDLIGLPPEDDWPRDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLTF 283 (308)
T ss_dssp TTSSCSCCCSSHH---------HHHHHHHHHHCCCCTTTSCSSCSSCGGGSCCCCCCCHHHHSCSCCHHHHHHHHHHTCS
T ss_pred HhCCCCCCCCCHH---------HHHHHHHHHhCCCChhhccchhhccccccCCCCCCcHHHhCccccHHHHHHHHHHhcC
Confidence 9999999653211 011111111000 0000 0011345788999999999
Q ss_pred CCCCCCCHHHHHH
Q 003847 763 LPQKRPSMKEALQ 775 (791)
Q Consensus 763 dP~~RPs~~evl~ 775 (791)
||++|||+.|+++
T Consensus 284 dP~~R~t~~e~l~ 296 (308)
T 3g33_A 284 NPHKRISAFRALQ 296 (308)
T ss_dssp STTTSCCHHHHHT
T ss_pred CCccCCCHHHHhc
Confidence 9999999999986
No 166
>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}
Probab=100.00 E-value=4.6e-39 Score=344.09 Aligned_cols=256 Identities=20% Similarity=0.298 Sum_probs=192.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 87 (311)
T 4agu_A 8 IGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDHT 87 (311)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhheeecCCeEEEEEEeCCCc
Confidence 468999999999999964 58999999986543 233567889999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 88 ~l~~~~~~~~-----~~~~~~~~~i~~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----- 157 (311)
T 4agu_A 88 VLHELDRYQR-----GVPEHLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSD----- 157 (311)
T ss_dssp HHHHHHHTSS-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC---------
T ss_pred hHHHHHhhhc-----CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCccc-----
Confidence 9998876543 389999999999999999999999999999999999999999999999999987642211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+ ..++.++||||||+++|||++|+.||...
T Consensus 158 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~ 206 (311)
T 4agu_A 158 -------------------------------YYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGK 206 (311)
T ss_dssp ---------------------------------------GGGCCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred -------------------------------ccCCCcCCccccChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCC
Confidence 1113358999999999976 67899999999999999999999999653
Q ss_pred ccCCCCcchhch-----hHHHHHHH-Hhhhc--Cc------cc----hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 716 LGQGNGLLVEDK-----NRAIRLAD-AAIRA--DF------EG----KEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 716 ~~~~~~~~~~~~-----~~~~~~~~-~~~~~--~~------~~----~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
........+... ........ ..... .. .. ....+..+.+++.+||+.||++|||++|+++.
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~h 285 (311)
T 4agu_A 207 SDVDQLYLIRKTLGDLIPRHQQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHH 285 (311)
T ss_dssp SHHHHHHHHHHHHCSCCHHHHHHHHTCGGGTTCCCCCCSSCCCHHHHCTTCCHHHHHHHHHHCCSSTTTSCCHHHHHTS
T ss_pred CHHHHHHHHHHHhcccccccccccccccccccCcCCCccccchhhhhcccccHHHHHHHHHHccCChhhcCCHHHHhcC
Confidence 211000000000 00000000 00000 00 00 01134568899999999999999999999864
No 167
>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}
Probab=100.00 E-value=8e-40 Score=358.31 Aligned_cols=249 Identities=16% Similarity=0.157 Sum_probs=198.1
Q ss_pred hcceeccccCceEEEEEE------eCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC---CCCccceeeEEEccCceEE
Q 003847 478 ASAYILGASGSSIMYKAV------LEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV---HPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~------~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~l 548 (791)
...+.||+|+||.||+|. ..+++.||||++..... .++..|++++++++ |+||+++++++...+..++
T Consensus 68 ~~~~~lG~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~---~~~~~e~~~~~~l~~~~~~~iv~~~~~~~~~~~~~l 144 (365)
T 3e7e_A 68 YVHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANP---WEFYIGTQLMERLKPSMQHMFMKFYSAHLFQNGSVL 144 (365)
T ss_dssp EEEEEEEECSSEEEEEEEC-------CCCCEEEEEESSCCH---HHHHHHHHHHHHSCGGGGGGBCCEEEEEECSSCEEE
T ss_pred EEEEEeeccCCEEEEEEEecCCcccccCcEEEEEEeCCCCh---hHHHHHHHHHHHhhhhhhhhhhhhheeeecCCCcEE
Confidence 345789999999999993 45689999999976543 56777888888886 9999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-----------CCCeEE
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-----------DMEPKI 617 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-----------~~~~kL 617 (791)
||||+++|+|.+++..........+++..++.|+.||+.||+|||+.|||||||||+|||++. ++.+||
T Consensus 145 v~e~~~~g~L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl 224 (365)
T 3e7e_A 145 VGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLAL 224 (365)
T ss_dssp EECCCCSCBHHHHHHHHHTSTTCSCCHHHHHHHHHHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEE
T ss_pred EEeccCCCcHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEE
Confidence 999999999999998654333345999999999999999999999999999999999999998 899999
Q ss_pred eccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHH
Q 003847 618 GDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYS 697 (791)
Q Consensus 618 ~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwS 697 (791)
+|||+++.+...... ......+||+.|+|||++.+..++.++||||
T Consensus 225 ~DFG~a~~~~~~~~~----------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~Diws 270 (365)
T 3e7e_A 225 IDLGQSIDMKLFPKG----------------------------------TIFTAKCETSGFQCVEMLSNKPWNYQIDYFG 270 (365)
T ss_dssp CCCTTCEEGGGSCTT----------------------------------EEECCSSCTTSCCCHHHHTTCCBSTHHHHHH
T ss_pred eeCchhhhhhccCCC----------------------------------ceeeeecCCCCCCChHHhcCCCCCccccHHH
Confidence 999999765421110 0122346999999999999999999999999
Q ss_pred HHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCC-CCHHHHHHH
Q 003847 698 FGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKR-PSMKEALQA 776 (791)
Q Consensus 698 lGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~R-Ps~~evl~~ 776 (791)
|||++|||+||+.||......... ... .. .... ....+.+++..|++.+|.+| |+++++.+.
T Consensus 271 lG~il~elltg~~pf~~~~~~~~~--~~~----------~~-~~~~----~~~~~~~~~~~~l~~~p~~r~~~~~~l~~~ 333 (365)
T 3e7e_A 271 VAATVYCMLFGTYMKVKNEGGECK--PEG----------LF-RRLP----HLDMWNEFFHVMLNIPDCHHLPSLDLLRQK 333 (365)
T ss_dssp HHHHHHHHHHSSCCCEEEETTEEE--ECS----------CC-TTCS----SHHHHHHHHHHHHCCCCTTCCCCHHHHHHH
T ss_pred HHHHHHHHHhCCCccccCCCCcee--ech----------hc-cccC----cHHHHHHHHHHHcCCCCCCcchHHHHHHHH
Confidence 999999999999998654221000 000 00 0111 23456678889999999999 688888888
Q ss_pred hccC
Q 003847 777 LEKI 780 (791)
Q Consensus 777 L~~i 780 (791)
|+++
T Consensus 334 l~~~ 337 (365)
T 3e7e_A 334 LKKV 337 (365)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7764
No 168
>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A
Probab=100.00 E-value=4.1e-39 Score=340.90 Aligned_cols=240 Identities=21% Similarity=0.313 Sum_probs=192.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEcc----CceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV----DEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----~~~~lv~e~ 552 (791)
...||+|+||.||+|.. .++..||+|++... .....+.+.+|++++++++||||+++++++... ...++||||
T Consensus 31 ~~~lg~G~~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~lv~e~ 110 (290)
T 1t4h_A 31 DIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWESTVKGKKCIVLVTEL 110 (290)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEESSSCEEEEEEEEC
T ss_pred eeeccCCCCeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccccCCCceEEEEEEe
Confidence 45899999999999995 56889999998654 344457799999999999999999999998753 457999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CeecCCCCCCeEec-CCCCeEEeccCcccccCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK--HVHGNLKPRNVLLG-NDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~--ivHrDlkp~NILl~-~~~~~kL~DFGla~~~~~~ 629 (791)
+++++|.+++.... .+++..++.|+.|++.||+|||+.+ |+||||||+||+++ .++.+||+|||++......
T Consensus 111 ~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~ 185 (290)
T 1t4h_A 111 MTSGTLKTYLKRFK-----VMKIKVLRSWCRQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRAS 185 (290)
T ss_dssp CCSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTT
T ss_pred cCCCCHHHHHHHcc-----CCCHHHHHHHHHHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCccccccc
Confidence 99999999997754 3899999999999999999999999 99999999999998 7899999999999754321
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
. .....||+.|+|||++.+ .++.++||||||+++|+|++|+
T Consensus 186 ~--------------------------------------~~~~~~t~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~ 226 (290)
T 1t4h_A 186 F--------------------------------------AKAVIGTPEFMAPEMYEE-KYDESVDVYAFGMCMLEMATSE 226 (290)
T ss_dssp S--------------------------------------BEESCSSCCCCCGGGGGT-CCCTHHHHHHHHHHHHHHHHSS
T ss_pred c--------------------------------------cccccCCcCcCCHHHHhc-cCCCcchHHHHHHHHHHHHhCC
Confidence 1 112348999999998875 5899999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcC--ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRAD--FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.||..... . ........... ..........+.+++.+||+.||++|||+.|+++
T Consensus 227 ~pf~~~~~---------~---~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 282 (290)
T 1t4h_A 227 YPYSECQN---------A---AQIYRRVTSGVKPASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282 (290)
T ss_dssp CTTTTCSS---------H---HHHHHHHTTTCCCGGGGGCCCHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCCcCc---------H---HHHHHHHhccCCccccCCCCCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 99964311 0 11111111110 0111113357889999999999999999999986
No 169
>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*
Probab=100.00 E-value=7.2e-40 Score=344.48 Aligned_cols=246 Identities=24% Similarity=0.348 Sum_probs=194.5
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEcc-CceEEEEeccCCCC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV-DEKLIIYDFVPNGS 557 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-~~~~lv~e~~~~gs 557 (791)
..+.||+|+||.||++... |+.||||++.... ..+.+.+|++++++++||||+++++++.+. +..++||||+++++
T Consensus 25 ~~~~lg~G~~g~V~~~~~~-~~~vavK~~~~~~--~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~~~~ 101 (278)
T 1byg_A 25 LLQTIGKGEFGDVMLGDYR-GNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGS 101 (278)
T ss_dssp EEEEEEECSSCEEEEEEET-TEEEEEEECCCCC----HHHHHTHHHHTTCCCTTBCCEEEEECCC--CCEEEECCCTTEE
T ss_pred EEeEEecCCCceEEEEEEc-CCEEEEEEecchh--HHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCCceEEEEecCCCCC
Confidence 4578999999999999874 8999999997653 346789999999999999999999997654 47899999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++...... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.......
T Consensus 102 L~~~l~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~------- 171 (278)
T 1byg_A 102 LVDYLRSRGRS---VLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ------- 171 (278)
T ss_dssp HHHHHHHHHHH---HCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---------------
T ss_pred HHHHHHhcccc---cCCHHHHHHHHHHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccc-------
Confidence 99998765321 27899999999999999999999999999999999999999999999999987543211
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~pf~~~~ 716 (791)
....+++.|+|||++.+..++.++||||||+++|||++ |+.||....
T Consensus 172 --------------------------------~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~ 219 (278)
T 1byg_A 172 --------------------------------DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIP 219 (278)
T ss_dssp ------------------------------------CCTTTSCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCCSCTTSC
T ss_pred --------------------------------cCCCccccccCHHHhCCCCCCchhcHHHHHHHHHHHHhCCCCCCCCCC
Confidence 01236788999999998899999999999999999998 999986532
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
.. ........... .......+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 220 ~~----------~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~L~~i~ 272 (278)
T 1byg_A 220 LK----------DVVPRVEKGYK--MDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQLREQLEHIK 272 (278)
T ss_dssp GG----------GHHHHHTTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HH----------HHHHHHhcCCC--CCCcccCCHHHHHHHHHHhcCChhhCCCHHHHHHHHHHHH
Confidence 11 01111111111 1112224567889999999999999999999999998875
No 170
>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=2.4e-39 Score=357.58 Aligned_cols=275 Identities=21% Similarity=0.262 Sum_probs=186.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccC-CCCccceeeEEEccC--ceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVD--EKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~--~~~lv~e~~ 553 (791)
...||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.+++++. ||||+++++++...+ ..|+||||+
T Consensus 14 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~~~~~~~~lv~e~~ 93 (388)
T 3oz6_A 14 VKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYM 93 (388)
T ss_dssp EEC-------CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECTTSSCEEEEEECC
T ss_pred EEEeeeCCCeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEecCCCCEEEEEeccc
Confidence 46899999999999994 57999999998653 3444567889999999997 999999999998654 689999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
+ ++|.+++... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+.......
T Consensus 94 ~-~~L~~~~~~~------~~~~~~~~~i~~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~ 166 (388)
T 3oz6_A 94 E-TDLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVT 166 (388)
T ss_dssp S-EEHHHHHHHT------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCC
T ss_pred C-cCHHHHHHcC------CCCHHHHHHHHHHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCccccccccccccc
Confidence 7 6899888763 38999999999999999999999999999999999999999999999999998765322111
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
..... . .. ................+||+.|+|||++.+ ..++.++|||||||++|||++|+.||
T Consensus 167 ~~~~~----~----------~~-~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf 231 (388)
T 3oz6_A 167 NNIPL----S----------IN-ENTENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIF 231 (388)
T ss_dssp CCGGG----C----------CC----------------CCCGGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSC
T ss_pred ccccc----c----------cc-ccccccccccccccCCcccCCcCCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCC
Confidence 00000 0 00 000000011123445679999999999976 67899999999999999999999999
Q ss_pred hccccCCCCcchhc------h--------hHHHHHHHH----------hhhcCcc----------chHHHHHHHHHHHhh
Q 003847 713 VDELGQGNGLLVED------K--------NRAIRLADA----------AIRADFE----------GKEEALLSCFKLGYS 758 (791)
Q Consensus 713 ~~~~~~~~~~~~~~------~--------~~~~~~~~~----------~~~~~~~----------~~~~~~~~l~~li~~ 758 (791)
.+.........+.. . ......... .....++ ........+.+|+.+
T Consensus 232 ~~~~~~~~~~~i~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~ 311 (388)
T 3oz6_A 232 PGSSTMNQLERIIGVIDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNLLLKINPKADCNEEALDLLDK 311 (388)
T ss_dssp CCSSHHHHHHHHHHHHCCCCHHHHHTSCCSSHHHHHHHHHHHCC-----CCCCHHHHHHHHHHHCTTCCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHhcCCCCHHHHHhccCHHHHHHHHhCcccccccCCCHHHhCcchhhhcccccccccCCHHHHHHHHH
Confidence 65321100000000 0 000000000 0000000 000124578899999
Q ss_pred ccCCCCCCCCCHHHHHHH
Q 003847 759 CASPLPQKRPSMKEALQA 776 (791)
Q Consensus 759 cl~~dP~~RPs~~evl~~ 776 (791)
||..||++|||++|+++.
T Consensus 312 ~L~~dP~~R~t~~e~l~H 329 (388)
T 3oz6_A 312 LLQFNPNKRISANDALKH 329 (388)
T ss_dssp HCCSSGGGSCCHHHHTTS
T ss_pred hhccCcccCCCHHHHhCC
Confidence 999999999999999876
No 171
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=100.00 E-value=1.7e-39 Score=381.86 Aligned_cols=243 Identities=21% Similarity=0.244 Sum_probs=203.0
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC---chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN---SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~---~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
...+||+|+||.||+|+. .+++.||||+++.. .....+.+..|.+++..+ +||+|+++++++.+.+..|+||||+
T Consensus 345 ~~~~LG~G~fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~~~~~~~~lV~E~~ 424 (674)
T 3pfq_A 345 FLMVLGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 424 (674)
T ss_dssp EEEESSBTTTBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEECBCSSEEEEEEECC
T ss_pred EEEEEccCCCEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEEEeCCEEEEEEeCc
Confidence 356899999999999995 46899999999753 223346788899999988 7999999999999999999999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++|+|.+++.... .+++..++.|+.||+.||+|||+.|||||||||+|||++.++.+||+|||+++.......
T Consensus 425 ~gg~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~-- 497 (674)
T 3pfq_A 425 NGGDLMYHIQQVG-----RFKEPHAVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-- 497 (674)
T ss_dssp CSCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTC--
T ss_pred CCCcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCc--
Confidence 9999999998764 399999999999999999999999999999999999999999999999999985432111
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....+||+.|+|||++.+..|+.++|||||||++|||++|+.||.
T Consensus 498 ----------------------------------~~~~~~GT~~Y~APE~l~~~~~~~~~DvwSlGvilyelltG~~Pf~ 543 (674)
T 3pfq_A 498 ----------------------------------TTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFE 543 (674)
T ss_dssp ----------------------------------CBCCCCSCSSSCCHHHHTCCCBSTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred ----------------------------------ccccccCCCcccCHhhhcCCCCCccceEechHHHHHHHHcCCCCCC
Confidence 1234579999999999999999999999999999999999999996
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCH-----HHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSM-----KEALQ 775 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~-----~evl~ 775 (791)
+.. ..++....+......+.....++.+|+.+||+.||++||++ +||++
T Consensus 544 ~~~-------------~~~~~~~i~~~~~~~p~~~s~~~~~li~~lL~~dP~~R~~~~~~~~~ei~~ 597 (674)
T 3pfq_A 544 GED-------------EDELFQSIMEHNVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKE 597 (674)
T ss_dssp CSS-------------HHHHHHHHHSSCCCCCTTSCHHHHHHHHHHSCSSSTTCTTCSTTHHHHHHS
T ss_pred CCC-------------HHHHHHHHHhCCCCCCccCCHHHHHHHHHHccCCHHHCCCCCCCcHHHHhc
Confidence 531 12233333334333344466788999999999999999997 77764
No 172
>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.8e-40 Score=357.75 Aligned_cols=250 Identities=18% Similarity=0.247 Sum_probs=198.8
Q ss_pred cceeccccCceEEEEEEe----CCCcEEEEEEcCCCc----hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEE
Q 003847 479 SAYILGASGSSIMYKAVL----EDGTALAVRRIGENS----VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~----~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 549 (791)
..+.||+|+||.||+|+. .+++.||||+++... ....+.+.+|+++++++ +||||+++++++...+..++|
T Consensus 58 ~~~~lG~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv 137 (355)
T 1vzo_A 58 LLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLI 137 (355)
T ss_dssp EEEEEEETTTEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEEEETTEEEEE
T ss_pred EEEEeccCCCEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEEeeCceEEEE
Confidence 457899999999999996 478999999997532 22345677899999999 699999999999999999999
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
|||+++++|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 138 ~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~ 212 (355)
T 1vzo_A 138 LDYINGGELFTHLSQRE-----RFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVAD 212 (355)
T ss_dssp ECCCCSCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGG
T ss_pred eecCCCCCHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccC
Confidence 99999999999998754 3899999999999999999999999999999999999999999999999999865321
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CCCCCchhhHHHHHHHHHHHh
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~~sDvwSlGvil~ellt 707 (791)
... .....+||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 213 ~~~-----------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~DvwslG~il~ell~ 257 (355)
T 1vzo_A 213 ETE-----------------------------------RAYDFCGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLT 257 (355)
T ss_dssp GGG-----------------------------------GGCGGGSCCTTCCHHHHTTCC---CTHHHHHHHHHHHHHHHH
T ss_pred CCC-----------------------------------cccCcccCcCccChhhhcCCCCCCCchhhHHHHHHHHHHHHH
Confidence 110 0113458999999999985 457899999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCC-----CHHHHHHHh
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRP-----SMKEALQAL 777 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RP-----s~~evl~~L 777 (791)
|+.||........ ...+..................+.+|+.+||..||++|| +++|+++..
T Consensus 258 g~~pf~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~~~~~~s~~ell~h~ 323 (355)
T 1vzo_A 258 GASPFTVDGEKNS---------QAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKRLGCGPRDADEIKEHL 323 (355)
T ss_dssp SSCTTSCTTSCCC---------HHHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSTTSSTTTHHHHHTSG
T ss_pred CCCCCccCCccch---------HHHHHHHHhccCCCCCcccCHHHHHHHHHHhhhCHHHhcCCCCCCHHHHHcCc
Confidence 9999965422111 111222222222222233456788999999999999999 999998753
No 173
>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*
Probab=100.00 E-value=2.5e-39 Score=339.78 Aligned_cols=242 Identities=22% Similarity=0.306 Sum_probs=192.3
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||+++
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~ 95 (276)
T 2h6d_A 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVSG 95 (276)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeecCCCCeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCeEEEEEeccCC
Confidence 468999999999999965 79999999986532 23346789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 96 ~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~---- 166 (276)
T 2h6d_A 96 GELFDYICKHG-----RVEEMEARRLFQQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEF---- 166 (276)
T ss_dssp CBHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-------
T ss_pred CcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcc----
Confidence 99999997754 389999999999999999999999999999999999999999999999999886542210
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHhCCcchhc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
.....||+.|+|||++.+..+ +.++||||||+++|+|++|+.||..
T Consensus 167 ---------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~ 213 (276)
T 2h6d_A 167 ---------------------------------LRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDD 213 (276)
T ss_dssp -------------------------------------------CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCC
T ss_pred ---------------------------------eecccCCccccCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCC
Confidence 112348899999999988765 6899999999999999999999864
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
... ..............+......+.+++.+||+.||++|||+.|+++.
T Consensus 214 ~~~-------------~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~~l~h 262 (276)
T 2h6d_A 214 EHV-------------PTLFKKIRGGVFYIPEYLNRSVATLLMHMLQVDPLKRATIKDIREH 262 (276)
T ss_dssp SSH-------------HHHHHHHHHCCCCCCTTSCHHHHHHHHHHTCSSGGGSCCHHHHHHS
T ss_pred CcH-------------HHHHHHhhcCcccCchhcCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 311 1111111112112222245678899999999999999999999974
No 174
>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...
Probab=100.00 E-value=8.2e-40 Score=350.56 Aligned_cols=258 Identities=22% Similarity=0.293 Sum_probs=203.5
Q ss_pred cceeccccCceEEEEEEe------CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhcc-CCCCccceeeEEEccC-ceEEE
Q 003847 479 SAYILGASGSSIMYKAVL------EDGTALAVRRIGENS-VDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVD-EKLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~-~~~lv 549 (791)
..+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+++++++ +||||+++++++...+ ..++|
T Consensus 31 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~~lv 110 (316)
T 2xir_A 31 LGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVI 110 (316)
T ss_dssp EEEEEEECSSEEEEEEEEESSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECCTTSCCEEE
T ss_pred eeeEEcCCCceeEEEEEEecCCccccceEEEEEecccCCCcHHHHHHHHHHHHHHhcccCCCeeeEEEEEecCCCceEEE
Confidence 457899999999999983 356899999997653 33456799999999999 7999999999988765 48999
Q ss_pred EeccCCCChhHHHHhhcCCC-----------CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEe
Q 003847 550 YDFVPNGSLANARYRKMGSS-----------PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIG 618 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~-----------~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~ 618 (791)
|||+++++|.+++....... ...+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+
T Consensus 111 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~ 190 (316)
T 2xir_A 111 VEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKIC 190 (316)
T ss_dssp EECCTTEEHHHHHHTCTTSEECC-------CTTCEEHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEEC
T ss_pred EEcCCCCcHHHHHHhcccccccccccchhhhccccCHHHHHHHHHHHHHHHHHHHhCCcccccCccceEEECCCCCEEEC
Confidence 99999999999998654310 1127899999999999999999999999999999999999999999999
Q ss_pred ccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHH
Q 003847 619 DFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSF 698 (791)
Q Consensus 619 DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSl 698 (791)
|||+++......... ......||+.|+|||++.+..++.++|||||
T Consensus 191 Dfg~~~~~~~~~~~~----------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~Di~sl 236 (316)
T 2xir_A 191 DFGLARDIYKDPDYV----------------------------------RKGDARLPLKWMAPETIFDRVYTIQSDVWSF 236 (316)
T ss_dssp CCGGGSCTTTCTTSE----------------------------------EETTEEECGGGCCHHHHHHCCCCHHHHHHHH
T ss_pred CCccccccccCccce----------------------------------eccCCCcceeecCchhhccccccchhHHHHH
Confidence 999998654322110 0112347889999999999899999999999
Q ss_pred HHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHh
Q 003847 699 GVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQAL 777 (791)
Q Consensus 699 Gvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L 777 (791)
|+++|||+| |+.||...... ............. .........+.+++.+||+.||++|||+.|+++.|
T Consensus 237 G~il~~l~t~g~~p~~~~~~~---------~~~~~~~~~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L 305 (316)
T 2xir_A 237 GVLLWEIFSLGASPYPGVKID---------EEFCRRLKEGTRM--RAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305 (316)
T ss_dssp HHHHHHHHTTSCCSSTTCCCS---------HHHHHHHHHTCCC--CCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCcccchh---------HHHHHHhccCccC--CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHH
Confidence 999999998 99998653211 0111111111111 11122456788999999999999999999999999
Q ss_pred ccCC
Q 003847 778 EKIP 781 (791)
Q Consensus 778 ~~i~ 781 (791)
+++.
T Consensus 306 ~~~~ 309 (316)
T 2xir_A 306 GNLL 309 (316)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8764
No 175
>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*
Probab=100.00 E-value=7.2e-40 Score=353.05 Aligned_cols=260 Identities=27% Similarity=0.379 Sum_probs=201.7
Q ss_pred cceeccccCceEEEEEEe-CCCcE--EEEEEcCCC-chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEecc
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTA--LAVRRIGEN-SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFV 553 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~--vavK~~~~~-~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~ 553 (791)
..+.||+|+||.||+|+. .+++. ||||++... .....+.+.+|+++++++ +||||+++++++.+.+..++||||+
T Consensus 29 ~~~~lg~G~~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv~e~~ 108 (327)
T 1fvr_A 29 FQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYA 108 (327)
T ss_dssp EEEEEECGGGCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEEEETTEEEEEECCC
T ss_pred ceeeeecCCCceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceeeeeCCceEEEEecC
Confidence 356899999999999994 45664 499998653 333456789999999999 8999999999999999999999999
Q ss_pred CCCChhHHHHhhcC-----------CCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCc
Q 003847 554 PNGSLANARYRKMG-----------SSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGL 622 (791)
Q Consensus 554 ~~gsL~~~l~~~~~-----------~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGl 622 (791)
++++|.+++..... .....+++..++.++.||+.||+|||+.||+||||||+||+++.++.+||+|||+
T Consensus 109 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~ 188 (327)
T 1fvr_A 109 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL 188 (327)
T ss_dssp TTCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred CCCCHHHHHHhcccccccccccccccccccCCHHHHHHHHHHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCc
Confidence 99999999876530 1112489999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHH
Q 003847 623 ERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVIL 702 (791)
Q Consensus 623 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil 702 (791)
++...... ......+++.|+|||++.+..++.++||||||+++
T Consensus 189 ~~~~~~~~-------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il 231 (327)
T 1fvr_A 189 SRGQEVYV-------------------------------------KKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLL 231 (327)
T ss_dssp EESSCEEC-------------------------------------CC----CCTTTCCHHHHHHCEECHHHHHHHHHHHH
T ss_pred Cccccccc-------------------------------------cccCCCCCccccChhhhccccCCchhcchHHHHHH
Confidence 87432110 01122367889999999988899999999999999
Q ss_pred HHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 703 LELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 703 ~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
|||++ |+.||...... ........... ..........+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 232 ~ellt~g~~pf~~~~~~----------~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~~L~~~~ 299 (327)
T 1fvr_A 232 WEIVSLGGTPYCGMTCA----------ELYEKLPQGYR--LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 299 (327)
T ss_dssp HHHHTTSCCTTTTCCHH----------HHHHHGGGTCC--CCCCTTBCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCCcHH----------HHHHHhhcCCC--CCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 99998 99999653210 11111111111 1112224567889999999999999999999999998875
Q ss_pred CCCCCC
Q 003847 782 SSPSPY 787 (791)
Q Consensus 782 ~~~~p~ 787 (791)
.....+
T Consensus 300 ~~~~~~ 305 (327)
T 1fvr_A 300 EERKTY 305 (327)
T ss_dssp HSSSCS
T ss_pred HhhcCc
Confidence 554443
No 176
>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}
Probab=100.00 E-value=6.5e-40 Score=354.50 Aligned_cols=263 Identities=22% Similarity=0.275 Sum_probs=186.6
Q ss_pred hhcceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-CCCccceeeEEEc--------cCce
Q 003847 477 KASAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWG--------VDEK 546 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~--------~~~~ 546 (791)
+...+.||+|+||.||+|+. .+++.||||++........+.+.+|+.+++++. ||||+++++++.. ....
T Consensus 30 y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~ 109 (337)
T 3ll6_A 30 LRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEF 109 (337)
T ss_dssp EEEEEEEECCSSEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEE
T ss_pred EEEEEEEccCCceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceE
Confidence 34457999999999999995 578999999997766666778999999999996 9999999999852 3347
Q ss_pred EEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC--CeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 547 LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK--HVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~--ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
++||||+. |+|.+++....... .+++.+++.|+.||+.||+|||+.| |+||||||+|||++.++.+||+|||+++
T Consensus 110 ~lv~e~~~-g~L~~~l~~~~~~~--~~~~~~~~~i~~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~ 186 (337)
T 3ll6_A 110 LLLTELCK-GQLVEFLKKMESRG--PLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186 (337)
T ss_dssp EEEEECCS-EEHHHHHHHHHTTC--SCCHHHHHHHHHHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCB
T ss_pred EEEEEecC-CCHHHHHHHhhccC--CCCHHHHHHHHHHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccce
Confidence 89999995 79999887644332 4999999999999999999999999 9999999999999999999999999998
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccc---cCCCCCCchhhHHHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESL---RSIKPNPKWDVYSFGVI 701 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~---~~~~~~~~sDvwSlGvi 701 (791)
.............. ...........||+.|+|||++ .+..++.++|||||||+
T Consensus 187 ~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~~Dv~slG~i 242 (337)
T 3ll6_A 187 TISHYPDYSWSAQR------------------------RALVEEEITRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCI 242 (337)
T ss_dssp CCSSCC-------------------------------------------------------CCTTSCSSHHHHHHHHHHH
T ss_pred eccccCcccccccc------------------------cccchhhccccCCCCcCChhhhhccccCCCChHHhHHHHHHH
Confidence 76543221100000 0000112234589999999998 56778999999999999
Q ss_pred HHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 702 LLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 702 l~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
+|||++|+.||.+.... ......... +........+.+|+.+||+.||++|||+.|+++.|+.+.
T Consensus 243 l~el~~g~~p~~~~~~~-------------~~~~~~~~~--~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~~~~ 307 (337)
T 3ll6_A 243 LYLLCFRQHPFEDGAKL-------------RIVNGKYSI--PPHDTQYTVFHSLIRAMLQVNPEERLSIAEVVHQLQEIA 307 (337)
T ss_dssp HHHHHHSSCCC-------------------------CCC--CTTCCSSGGGHHHHHHHSCSSGGGSCCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCcchhHH-------------HhhcCcccC--CcccccchHHHHHHHHHccCChhhCcCHHHHHHHHHHHH
Confidence 99999999999653211 011111110 111112345778999999999999999999999998763
No 177
>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}
Probab=100.00 E-value=9.9e-40 Score=355.74 Aligned_cols=256 Identities=15% Similarity=0.150 Sum_probs=198.1
Q ss_pred ceeccccCceEEEEEEeC---------CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccc---------------
Q 003847 480 AYILGASGSSIMYKAVLE---------DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVR--------------- 535 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~---------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~--------------- 535 (791)
.+.||+|+||.||+|+.. +++.||||++... +.+.+|++++++++||||++
T Consensus 47 ~~~lg~G~~g~Vy~~~~~~t~~~~~~~~~~~vavK~~~~~-----~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~ 121 (352)
T 2jii_A 47 KSFQTRDNQGILYEAAPTSTLTCDSGPQKQKFSLKLDAKD-----GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPT 121 (352)
T ss_dssp EEEEEEETTEEEEEEEECC-----------CEEEEEEETT-----STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCC
T ss_pred EEEecCCCCeEEEEEeecCCccccccccCceEEEEEeccc-----chHHHHHHHHHHhcccchhhhhhhhccCCccCccc
Confidence 468999999999999965 3889999998754 45789999999999999988
Q ss_pred eeeEEEc-cCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-
Q 003847 536 IRGFYWG-VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM- 613 (791)
Q Consensus 536 l~~~~~~-~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~- 613 (791)
+++++.. .+..++||||+ +++|.+++...... .+++.+++.|+.||+.||+|||+.||+||||||+|||++.++
T Consensus 122 ~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~---~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~ 197 (352)
T 2jii_A 122 CMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKH---VLSERSVLQVACRLLDALEFLHENEYVHGNVTAENIFVDPEDQ 197 (352)
T ss_dssp CCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGG---CCCHHHHHHHHHHHHHHHHHHHHTTCBCSCCCGGGEEEETTEE
T ss_pred hhhccccCCcEEEEEecCC-CcCHHHHHHhCCcC---CCCHHHHHHHHHHHHHHHHHHHhCCccCCCCCHHHEEEcCCCC
Confidence 6777766 67789999999 99999999865221 399999999999999999999999999999999999999998
Q ss_pred -CeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCc
Q 003847 614 -EPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPK 692 (791)
Q Consensus 614 -~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~ 692 (791)
.+||+|||+++.+......... .........||+.|+|||++.+..++.+
T Consensus 198 ~~~kl~Dfg~a~~~~~~~~~~~~-----------------------------~~~~~~~~~gt~~y~aPE~~~~~~~~~~ 248 (352)
T 2jii_A 198 SQVTLAGYGFAFRYCPSGKHVAY-----------------------------VEGSRSPHEGDLEFISMDLHKGCGPSRR 248 (352)
T ss_dssp EEEEECCGGGCBCSSGGGCCCCC-----------------------------CTTSSCTTCSCTTTCCHHHHTTCCCCHH
T ss_pred ceEEEecCcceeeccCCCccccc-----------------------------cccccccccCCccccCHHHHccCCCCch
Confidence 8999999999876532211100 0011223469999999999999999999
Q ss_pred hhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccch------HHHHHHHHHHHhhccCCCCCC
Q 003847 693 WDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK------EEALLSCFKLGYSCASPLPQK 766 (791)
Q Consensus 693 sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~li~~cl~~dP~~ 766 (791)
+|||||||++|||++|+.||...... ................... ...+..+.+++.+||+.||++
T Consensus 249 ~Di~slG~il~el~~g~~pf~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~ 320 (352)
T 2jii_A 249 SDLQSLGYCMLKWLYGFLPWTNCLPN--------TEDIMKQKQKFVDKPGPFVGPCGHWIRPSETLQKYLKVVMALTYEE 320 (352)
T ss_dssp HHHHHHHHHHHHHHHSCCTTGGGTTC--------HHHHHHHHHHHHHSCCCEECTTSCEECCCHHHHHHHHHHHTCCTTC
T ss_pred hhHHHHHHHHHHHHhCCCCcccCCcC--------HHHHHHHHHhccCChhhhhhhccccCCCcHHHHHHHHHHHhCChhh
Confidence 99999999999999999999764211 0111111111111110000 013467889999999999999
Q ss_pred CCCHHHHHHHhccCC
Q 003847 767 RPSMKEALQALEKIP 781 (791)
Q Consensus 767 RPs~~evl~~L~~i~ 781 (791)
||+++++++.|+++.
T Consensus 321 Rps~~~l~~~L~~~~ 335 (352)
T 2jii_A 321 KPPYAMLRNNLEALL 335 (352)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 999999999998763
No 178
>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}
Probab=100.00 E-value=3.7e-40 Score=356.59 Aligned_cols=264 Identities=23% Similarity=0.306 Sum_probs=192.0
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHH--HhccCCCCccceeeEEEcc-----CceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRV--IAKLVHPNLVRIRGFYWGV-----DEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~--l~~l~H~nIv~l~~~~~~~-----~~~~lv~e~ 552 (791)
.+.||+|+||.||+|+. +++.||||++..... ..+..|.++ +..++||||+++++++... ...++||||
T Consensus 18 ~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~~---~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~~lv~e~ 93 (336)
T 3g2f_A 18 LELIGRGRYGAVYKGSL-DERPVAVKVFSFANR---QNFINEKNIYRVPLMEHDNIARFIVGDERVTADGRMEYLLVMEY 93 (336)
T ss_dssp EEEEEECSSEEEEEEEE-TTEEEEEEEEEGGGH---HHHHHHHHHHTSTTCCCTTBCCEEEEEEEECTTSCEEEEEEECC
T ss_pred eeecccCCCeEEEEEEE-CCeEEEEEEeeccch---hhHHHHHHHHHHHhccCcchhhheecccccccCCCceEEEEEec
Confidence 46899999999999987 689999999975433 334444444 5568999999999865432 256899999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC---------CCeecCCCCCCeEecCCCCeEEeccCcc
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK---------KHVHGNLKPRNVLLGNDMEPKIGDFGLE 623 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~---------~ivHrDlkp~NILl~~~~~~kL~DFGla 623 (791)
+++|+|.+++.... .++..+..|+.||+.||+|||+. ||+||||||+|||++.++.+||+|||++
T Consensus 94 ~~~g~L~~~l~~~~------~~~~~~~~i~~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a 167 (336)
T 3g2f_A 94 YPNGSLXKYLSLHT------SDWVSSCRLAHSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLS 167 (336)
T ss_dssp CTTCBHHHHHHHCC------BCHHHHHHHHHHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTC
T ss_pred CCCCcHHHHHhhcc------cchhHHHHHHHHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccce
Confidence 99999999997653 68999999999999999999999 9999999999999999999999999999
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-------CCCCCchhhH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-------IKPNPKWDVY 696 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-------~~~~~~sDvw 696 (791)
+.+......... .........+||+.|+|||++.+ ..++.++|||
T Consensus 168 ~~~~~~~~~~~~----------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diw 219 (336)
T 3g2f_A 168 MRLTGNRLVRPG----------------------------EEDNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMY 219 (336)
T ss_dssp EECSSSSCC-------------------------------------CCTTSCGGGCCHHHHTTCCCGGGHHHHHHHHHHH
T ss_pred eecccccccCcc----------------------------ccccccccCCCccceeCchhhcCCcccccccccccccchH
Confidence 876543211100 00111234569999999999986 4567799999
Q ss_pred HHHHHHHHHHhCCcchhccccC-CCCcchhc-------hhHHHHHH-HHhhhc----CccchHHHHHHHHHHHhhccCCC
Q 003847 697 SFGVILLELLTGKVIVVDELGQ-GNGLLVED-------KNRAIRLA-DAAIRA----DFEGKEEALLSCFKLGYSCASPL 763 (791)
Q Consensus 697 SlGvil~elltG~~pf~~~~~~-~~~~~~~~-------~~~~~~~~-~~~~~~----~~~~~~~~~~~l~~li~~cl~~d 763 (791)
||||++|||++|+.||...... ........ ........ ...... ........+..+.+|+.+||+.|
T Consensus 220 slG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~d 299 (336)
T 3g2f_A 220 ALGLIYWEIFMRCTDLFPGESVPEYQMAFQTEVGNHPTFEDMQVLVSREKQRPKFPEAWKENSLAVRSLKETIEDCWDQD 299 (336)
T ss_dssp HHHHHHHHHHTTBGGGSTTSCCCCCCCTTHHHHCSSCCHHHHHHHHTTSCCCCCCCTTCCCCSHHHHHHHHHHHHHSCSS
T ss_pred HHHHHHHHHHhcCCcCCCccchhHHHHhhhcccCCCchHHHHHhhhcccccCCCCCcccccccchHHHHHHHHHHHhcCC
Confidence 9999999999998876443221 11111100 00000110 011111 11112235667999999999999
Q ss_pred CCCCCCHHHHHHHhccCC
Q 003847 764 PQKRPSMKEALQALEKIP 781 (791)
Q Consensus 764 P~~RPs~~evl~~L~~i~ 781 (791)
|++|||++|+++.|+++.
T Consensus 300 P~~Rps~~e~l~~L~~ll 317 (336)
T 3g2f_A 300 AEARLTAQXAEERMAELM 317 (336)
T ss_dssp GGGSCCHHHHHHHHHHHH
T ss_pred hhhCcchHHHHHHHHHHH
Confidence 999999999999998863
No 179
>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*
Probab=100.00 E-value=3.1e-39 Score=367.96 Aligned_cols=245 Identities=26% Similarity=0.304 Sum_probs=193.5
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
..+.||+|+||.||+|+.. +++.||||++.... ......+.+|++++++++||||+++++++.+.+..|+||||+++
T Consensus 41 ~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~~ 120 (494)
T 3lij_A 41 RVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKG 120 (494)
T ss_dssp EEEEEECC---EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEEECCCS
T ss_pred EeeEEecCCCEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEEEeCCEEEEEEecCCC
Confidence 3568999999999999954 78999999997542 23356789999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC---CCCeEEeccCcccccCCCCCC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---~~~~kL~DFGla~~~~~~~~~ 632 (791)
|+|.+++.... .+++..+..|+.||+.||+|||+.||+||||||+|||++. ++.+||+|||+++.......
T Consensus 121 g~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~- 194 (494)
T 3lij_A 121 GELFDEIIHRM-----KFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKK- 194 (494)
T ss_dssp CBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBC-
T ss_pred CcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCcc-
Confidence 99999887664 3899999999999999999999999999999999999976 45599999999987643211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
....+||+.|+|||++.+ .++.++||||+||++|+|++|+.||
T Consensus 195 ------------------------------------~~~~~gt~~y~aPE~l~~-~~~~~~DiwslG~il~~ll~g~~pf 237 (494)
T 3lij_A 195 ------------------------------------MKERLGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF 237 (494)
T ss_dssp ------------------------------------BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHHHHHHHSSCSS
T ss_pred ------------------------------------ccccCCCcCeeCHHHHcc-cCCCchhHHHHHHHHHHHHhCCCCC
Confidence 123459999999999874 6899999999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
...... .....+.........+.....+..+.+|+.+||+.||++|||+.|+++
T Consensus 238 ~~~~~~---------~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 291 (494)
T 3lij_A 238 GGQTDQ---------EILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALE 291 (494)
T ss_dssp CCSSHH---------HHHHHHHHTCCCCCSGGGTTSCHHHHHHHHHHTCSSTTTSCCHHHHHT
T ss_pred CCCCHH---------HHHHHHHhCCCCCCchhcccCCHHHHHHHHHHCCCChhhCccHHHHhc
Confidence 653211 111111111111111111234567889999999999999999999985
No 180
>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*
Probab=100.00 E-value=1.5e-39 Score=350.92 Aligned_cols=245 Identities=20% Similarity=0.240 Sum_probs=186.4
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||.||+|+ ..+++.||||++..... ...+.+.+|++++++++||||+++++++.+.+..++||||++ |
T Consensus 39 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~ 117 (329)
T 3gbz_A 39 ITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHHNHRLHLIFEYAE-N 117 (329)
T ss_dssp EEEEEECSSSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred EEEEEecCCeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEEecCCEEEEEEecCC-C
Confidence 4689999999999998 45789999999975432 224567899999999999999999999999999999999997 5
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec-----CCCCeEEeccCcccccCCCCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG-----NDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~-----~~~~~kL~DFGla~~~~~~~~ 631 (791)
+|.+++.... .+++..++.|+.||+.||+|||+.||+||||||+|||++ .++.+||+|||+++.......
T Consensus 118 ~L~~~~~~~~-----~~~~~~~~~i~~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~ 192 (329)
T 3gbz_A 118 DLKKYMDKNP-----DVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIR 192 (329)
T ss_dssp EHHHHHHHCT-----TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC----
T ss_pred CHHHHHhhcC-----CCCHHHHHHHHHHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCccc
Confidence 9999887654 389999999999999999999999999999999999994 455699999999987642211
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~ 710 (791)
......||+.|+|||++.+. .++.++|||||||++|||++|+.
T Consensus 193 ------------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~ 236 (329)
T 3gbz_A 193 ------------------------------------QFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKTP 236 (329)
T ss_dssp -------------------------------------------CCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred ------------------------------------ccCCCcCCccccCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCC
Confidence 11233589999999999874 48999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhc----------------Cc-----c-----chHHHHHHHHHHHhhccCCCC
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRA----------------DF-----E-----GKEEALLSCFKLGYSCASPLP 764 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~-----~-----~~~~~~~~l~~li~~cl~~dP 764 (791)
||...... .....+....... .+ . ........+.+|+.+||+.||
T Consensus 237 pf~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 307 (329)
T 3gbz_A 237 LFPGDSEI---------DQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALLDDEGLDLLTAMLEMDP 307 (329)
T ss_dssp SSCCSSHH---------HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTCCCCCCCCHHHHHGGGSCHHHHHHHHHHTCSSG
T ss_pred CcCCCCHH---------HHHHHHHHHhCCCchhhhhhhhhhhhhhhhhhhhccccHhhhcccccCHHHHHHHHHHccCCh
Confidence 99653210 0111111100000 00 0 000023567899999999999
Q ss_pred CCCCCHHHHHH
Q 003847 765 QKRPSMKEALQ 775 (791)
Q Consensus 765 ~~RPs~~evl~ 775 (791)
++|||++|+++
T Consensus 308 ~~R~t~~e~l~ 318 (329)
T 3gbz_A 308 VKRISAKNALE 318 (329)
T ss_dssp GGSCCHHHHHT
T ss_pred hhCCCHHHHhC
Confidence 99999999987
No 181
>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*
Probab=100.00 E-value=1.2e-39 Score=370.65 Aligned_cols=245 Identities=23% Similarity=0.309 Sum_probs=199.5
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++.+.+..++||||+.
T Consensus 30 ~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~~ 109 (484)
T 3nyv_A 30 GQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFFEDKGYFYLVGEVYT 109 (484)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEEECSSEEEEEECCCC
T ss_pred EeeEEecCCCEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEEEeCCEEEEEEecCC
Confidence 3568999999999999954 79999999985432 3345789999999999999999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe---cCCCCeEEeccCcccccCCCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~~~ 631 (791)
+|+|.+++.... .+++..+..|+.||+.||+|||+.||+||||||+|||+ +.++.+||+|||+++.......
T Consensus 110 ~~~L~~~~~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~ 184 (484)
T 3nyv_A 110 GGELFDEIISRK-----RFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKK 184 (484)
T ss_dssp SCBHHHHHHTCS-----CCBHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCS
T ss_pred CCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccc
Confidence 999999887653 39999999999999999999999999999999999999 5678999999999987643211
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~p 711 (791)
....+||+.|+|||++.+ .++.++||||+||++|+|++|+.|
T Consensus 185 -------------------------------------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il~~ll~g~~p 226 (484)
T 3nyv_A 185 -------------------------------------MKDKIGTAYYIAPEVLHG-TYDEKCDVWSTGVILYILLSGCPP 226 (484)
T ss_dssp -------------------------------------HHHHTTGGGTCCHHHHHT-CCCTHHHHHHHHHHHHHHHHSSCS
T ss_pred -------------------------------------cccCCCCccccCceeecC-CCCCcceeHHHHHHHHHHHHCCCC
Confidence 112358999999999976 689999999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
|..... ......+.........+.....+..+.+|+.+||+.||++|||+.|+++
T Consensus 227 f~~~~~---------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~s~~e~l~ 281 (484)
T 3nyv_A 227 FNGANE---------YDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALD 281 (484)
T ss_dssp SCCSSH---------HHHHHHHHHCCCCCCSGGGGGSCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred CCCCCH---------HHHHHHHHcCCCCCCCcccccCCHHHHHHHHHHCCCChhHCcCHHHHhh
Confidence 965321 1111111111111112222335677899999999999999999999986
No 182
>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=5.4e-39 Score=351.56 Aligned_cols=256 Identities=20% Similarity=0.261 Sum_probs=190.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceEEEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv~ 550 (791)
...||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++...+ ..|+||
T Consensus 30 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~~~~~~~~~~lv~ 109 (367)
T 1cm8_A 30 LQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDETLDDFTDFYLVM 109 (367)
T ss_dssp EEEC------CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCSSTTTCCCCEEEE
T ss_pred eEEeeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCCccccCceEEEEE
Confidence 46899999999999995 57999999999653 3334567899999999999999999999998763 459999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+ +++|.+++... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 110 e~~-~~~L~~~~~~~------~l~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~- 181 (367)
T 1cm8_A 110 PFM-GTDLGKLMKHE------KLGEDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE- 181 (367)
T ss_dssp ECC-SEEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSS-
T ss_pred ecC-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccc-
Confidence 999 88999988763 3899999999999999999999999999999999999999999999999999865321
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~ 709 (791)
.....||+.|+|||++.+ ..++.++||||+||++|||++|+
T Consensus 182 --------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 223 (367)
T 1cm8_A 182 --------------------------------------MTGYVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223 (367)
T ss_dssp --------------------------------------CCSSCSCGGGCCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSS
T ss_pred --------------------------------------cCcCcCCCCcCCHHHHhCCCCCChhhhHHHHHHHHHHHHhCC
Confidence 123458999999999877 67999999999999999999999
Q ss_pred cchhccccCCCCcchhc--------------hhHHHHHHHHhh---hcCcc-chHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 710 VIVVDELGQGNGLLVED--------------KNRAIRLADAAI---RADFE-GKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~--------------~~~~~~~~~~~~---~~~~~-~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
.||.+.........+.. ............ ...+. ........+.+|+.+||..||++|||+.
T Consensus 224 ~pf~~~~~~~~l~~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~mL~~dP~~R~t~~ 303 (367)
T 1cm8_A 224 TLFKGSDHLDQLKEIMKVTGTPPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAG 303 (367)
T ss_dssp CSSCCSSHHHHHHHHHHHHCCCCHHHHHTCSCHHHHHHHHHSCCCCCCCGGGTCTTCCHHHHHHHHHHSCSSTTTSCCHH
T ss_pred CCCCCCCHHHHHHHHHHhcCCCCHHHHHHhhhHHHHHHHHhCCCCCCCCHHHHCCCCCHHHHHHHHHHccCChhHCCCHH
Confidence 99965321100000000 000000000000 00000 0011345788999999999999999999
Q ss_pred HHHHH--hccCC
Q 003847 772 EALQA--LEKIP 781 (791)
Q Consensus 772 evl~~--L~~i~ 781 (791)
|+++. ++++.
T Consensus 304 e~l~hp~f~~~~ 315 (367)
T 1cm8_A 304 EALAHPYFESLH 315 (367)
T ss_dssp HHHHSGGGTTTC
T ss_pred HHhcChHHHhhc
Confidence 99983 55543
No 183
>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A
Probab=100.00 E-value=2.1e-40 Score=364.50 Aligned_cols=238 Identities=15% Similarity=0.160 Sum_probs=185.2
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCC---CchhhHHHHHHHH---HHHhccCCCCcccee-------eEEEccCc
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGE---NSVDRFRDFETQV---RVIAKLVHPNLVRIR-------GFYWGVDE 545 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~---~~~~~~~~~~~E~---~~l~~l~H~nIv~l~-------~~~~~~~~ 545 (791)
.+.||+|+||.||+|+. .+|+.||||++.. ......+.+.+|+ +++++++|||||+++ +++...+.
T Consensus 78 ~~~lG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 157 (377)
T 3byv_A 78 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 157 (377)
T ss_dssp EEEEEEETTEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTS
T ss_pred cceeecCCCEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCC
Confidence 56899999999999994 6799999999963 2334567899999 455566899999998 66665532
Q ss_pred -----------------eEEEEeccCCCChhHHHHhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCC
Q 003847 546 -----------------KLIIYDFVPNGSLANARYRKMGSS--PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRN 606 (791)
Q Consensus 546 -----------------~~lv~e~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~N 606 (791)
.|+||||+ +|+|.+++....... ...+++..++.|+.||+.||+|||+.||+||||||+|
T Consensus 158 ~~~~~~~~~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~ivHrDikp~N 236 (377)
T 3byv_A 158 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVD 236 (377)
T ss_dssp CSEEEC------CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred ccccccccCCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHH
Confidence 78999999 689999998653211 0124458888999999999999999999999999999
Q ss_pred eEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC
Q 003847 607 VLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS 686 (791)
Q Consensus 607 ILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~ 686 (791)
||++.++.+||+|||+++..... ....+| +.|+|||++.+
T Consensus 237 Ill~~~~~~kL~DFG~a~~~~~~---------------------------------------~~~~~g-~~y~aPE~~~~ 276 (377)
T 3byv_A 237 IVLDQRGGVFLTGFEHLVRDGAR---------------------------------------VVSSVS-RGFEPPELEAR 276 (377)
T ss_dssp EEECTTCCEEECCGGGCEETTCE---------------------------------------EECCCC-TTCCCHHHHHH
T ss_pred EEEcCCCCEEEEechhheecCCc---------------------------------------ccCCCC-cCccChhhhcc
Confidence 99999999999999999853311 112347 88999999988
Q ss_pred C-----------CCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHH
Q 003847 687 I-----------KPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKL 755 (791)
Q Consensus 687 ~-----------~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l 755 (791)
. .++.++|||||||++|||++|+.||...........+.. . . ...+..+.+|
T Consensus 277 ~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~~~~~~~~-------------~-~---~~~~~~~~~l 339 (377)
T 3byv_A 277 RATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALGGSEWIFR-------------S-C---KNIPQPVRAL 339 (377)
T ss_dssp HTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------CCSGGGGS-------------S-C---CCCCHHHHHH
T ss_pred cccccccccccccCChhhhHHHHHHHHHHHHHCCCCCcccccccchhhhhh-------------h-c---cCCCHHHHHH
Confidence 7 899999999999999999999999966433221111110 0 0 1134568899
Q ss_pred HhhccCCCCCCCCCHHHHHH
Q 003847 756 GYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 756 i~~cl~~dP~~RPs~~evl~ 775 (791)
+.+||+.||++|||+.|+++
T Consensus 340 i~~~L~~dp~~Rpt~~e~l~ 359 (377)
T 3byv_A 340 LEGFLRYPKEDRLLPLQAME 359 (377)
T ss_dssp HHHHTCSSGGGCCCHHHHHT
T ss_pred HHHHcCCCchhCCCHHHHhh
Confidence 99999999999999999986
No 184
>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}
Probab=100.00 E-value=7.3e-39 Score=361.67 Aligned_cols=215 Identities=18% Similarity=0.236 Sum_probs=151.4
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEcc-----CceEEEE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV-----DEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lv~ 550 (791)
..+.||+|+||.||+|+. .+++.||||++... .....+.+.+|+++|++++||||+++++++... ...|+||
T Consensus 57 ~~~~lG~G~~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~~~~~~~~~~lv~ 136 (458)
T 3rp9_A 57 IRHLIGTGSYGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVL 136 (458)
T ss_dssp ECCC-------CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEE
T ss_pred EeeEeeecCCeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecCCcccCceEEEEE
Confidence 356899999999999984 47899999999653 334457889999999999999999999998543 5689999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+ +++|.+++.... .+++..++.|+.||+.||+|||+.|||||||||+|||++.++.+||+|||+++......
T Consensus 137 e~~-~~~L~~~~~~~~-----~l~~~~~~~~~~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~ 210 (458)
T 3rp9_A 137 EIA-DSDFKKLFRTPV-----YLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPE 210 (458)
T ss_dssp CCC-SEEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCT
T ss_pred ecc-ccchhhhcccCC-----CCCHHHHHHHHHHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCcc
Confidence 998 579998886543 39999999999999999999999999999999999999999999999999999775432
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccc-cCCCCCCchhhHHHHHHHHHHHhC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESL-RSIKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~-~~~~~~~~sDvwSlGvil~elltG 708 (791)
.......... .. .....................+||+.|+|||++ .+..++.++|||||||++|||++|
T Consensus 211 ~~~~~~~~~~----~~-----~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~~DiwSlG~il~elltg 280 (458)
T 3rp9_A 211 NGNSQLPISP----RE-----DDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNM 280 (458)
T ss_dssp TCCCCCC------------------------------------CCCTTCCHHHHTTCCCCCTHHHHHHHHHHHHHHHTT
T ss_pred ccccccccCc----cc-----cccccccccccccccccccCCcccccccChHHhhCCCCCCcHhHHHHHHHHHHHHHHh
Confidence 2111000000 00 000000000000111234566799999999986 566799999999999999999994
No 185
>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A
Probab=100.00 E-value=1.1e-39 Score=363.32 Aligned_cols=242 Identities=25% Similarity=0.323 Sum_probs=185.2
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--------hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS--------VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 549 (791)
..+.||+|+||.||+|.. .+++.||||++.... ......+.+|++++++++||||+++++++. .+..++|
T Consensus 139 ~~~~LG~G~~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~~-~~~~~lv 217 (419)
T 3i6u_A 139 MSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFD-AEDYYIV 217 (419)
T ss_dssp EEEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEEE-SSEEEEE
T ss_pred EEeEEeeCCCeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEEe-cCceEEE
Confidence 457899999999999984 568999999986532 112235789999999999999999999975 4568999
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC---CCeEEeccCccccc
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND---MEPKIGDFGLERLV 626 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~---~~~kL~DFGla~~~ 626 (791)
|||+++|+|.+++.... .+++..++.|+.|++.||+|||+.||+||||||+|||++.+ +.+||+|||+++..
T Consensus 218 ~e~~~~g~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~ 292 (419)
T 3i6u_A 218 LELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 292 (419)
T ss_dssp EECCTTCBGGGGTSSSC-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSC
T ss_pred EEcCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceec
Confidence 99999999998876543 39999999999999999999999999999999999999754 45999999999875
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC---CCCCCchhhHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS---IKPNPKWDVYSFGVILL 703 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~---~~~~~~sDvwSlGvil~ 703 (791)
.... .....+||+.|+|||++.+ ..++.++|||||||++|
T Consensus 293 ~~~~-------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~DiwslG~il~ 335 (419)
T 3i6u_A 293 GETS-------------------------------------LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 335 (419)
T ss_dssp C------------------------------------------------CTTCCTTTTC----CTTHHHHHHHHHHHHHH
T ss_pred CCCc-------------------------------------cccccCCCCCccCceeeecCCCCCCCchhhhHhHHHHHH
Confidence 4211 1123469999999999853 56788999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||++|+.||........ ..... ..+..... ......+.+++.+||+.||++|||++|+++
T Consensus 336 ~lltg~~pf~~~~~~~~---------~~~~i---~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e~l~ 399 (419)
T 3i6u_A 336 ICLSGYPPFSEHRTQVS---------LKDQI---TSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 399 (419)
T ss_dssp HHHHSSCSSCCCSSSCC---------HHHHH---HTTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHH
T ss_pred HHHHCCCCCCCCcchHH---------HHHHH---hcCCCCCCchhhcccCHHHHHHHHHHccCChhHCcCHHHHhC
Confidence 99999999965322111 01111 11111111 123567889999999999999999999987
No 186
>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}
Probab=100.00 E-value=4.7e-39 Score=367.45 Aligned_cols=241 Identities=23% Similarity=0.291 Sum_probs=195.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCch-------------hhHHHHHHHHHHHhccCCCCccceeeEEEccCc
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSV-------------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE 545 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~-------------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~ 545 (791)
.+.||+|+||.||+|+. .+++.||||++..... ...+.+.+|++++++++||||+++++++.+.+.
T Consensus 41 ~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~ 120 (504)
T 3q5i_A 41 VRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKY 120 (504)
T ss_dssp EEEEEC--CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEEECSSE
T ss_pred EeEecccCCeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcCCE
Confidence 46899999999999995 4689999999865321 234678999999999999999999999999999
Q ss_pred eEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC---CeEEeccCc
Q 003847 546 KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM---EPKIGDFGL 622 (791)
Q Consensus 546 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~---~~kL~DFGl 622 (791)
.++||||+++|+|.+++.... .+++..+..|+.||+.||+|||+.||+||||||+|||++.++ .+||+|||+
T Consensus 121 ~~lv~e~~~gg~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~ 195 (504)
T 3q5i_A 121 FYLVTEFYEGGELFEQIINRH-----KFDECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGL 195 (504)
T ss_dssp EEEEEECCTTCBHHHHHHHHS-----CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTT
T ss_pred EEEEEecCCCCcHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCC
Confidence 999999999999999887654 399999999999999999999999999999999999998775 699999999
Q ss_pred ccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHH
Q 003847 623 ERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVIL 702 (791)
Q Consensus 623 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil 702 (791)
++....... ....+||+.|+|||++.+ .++.++||||+||++
T Consensus 196 a~~~~~~~~-------------------------------------~~~~~gt~~y~aPE~~~~-~~~~~~DiwslG~il 237 (504)
T 3q5i_A 196 SSFFSKDYK-------------------------------------LRDRLGTAYYIAPEVLKK-KYNEKCDVWSCGVIM 237 (504)
T ss_dssp CEECCTTSC-------------------------------------BCCCCSCTTTCCHHHHTT-CBCTHHHHHHHHHHH
T ss_pred CEEcCCCCc-------------------------------------cccccCCcCCCCHHHhcc-CCCchHHHHHHHHHH
Confidence 987643211 123459999999999875 689999999999999
Q ss_pred HHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 703 LELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 703 ~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|+|++|+.||.+... .++......+.+... ...+..+.+|+.+||..||.+|||+.|+++.
T Consensus 238 ~~ll~g~~pf~~~~~-------------~~~~~~i~~~~~~~~~~~~~~~s~~~~~li~~~L~~dp~~R~t~~e~l~h 302 (504)
T 3q5i_A 238 YILLCGYPPFGGQND-------------QDIIKKVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNS 302 (504)
T ss_dssp HHHHHSSCSSCCSSH-------------HHHHHHHHHCCCCCCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHHHhCCCCCCCCCH-------------HHHHHHHHcCCCCCCccccCCCCHHHHHHHHHHcCCChhHCCCHHHHhcC
Confidence 999999999965321 112222222222111 1235678999999999999999999999863
No 187
>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}
Probab=100.00 E-value=8.8e-39 Score=342.37 Aligned_cols=244 Identities=21% Similarity=0.351 Sum_probs=195.4
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.+.||+|+||.||+|... +|+.||||++.... ..+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 34 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~--~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 111 (314)
T 3com_A 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSV 111 (314)
T ss_dssp EEECC----CEEEEEEETTTCCEEEEEEEETTS--CCHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEEH
T ss_pred heeeccCCCeEEEEEEECCCCCEEEEEecCchH--HHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEeecCCCCCH
Confidence 468999999999999964 58999999997643 246789999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++..... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 112 ~~~~~~~~~----~~~~~~~~~i~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~------- 180 (314)
T 3com_A 112 SDIIRLRNK----TLTEDEIATILQSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMA------- 180 (314)
T ss_dssp HHHHHHHTC----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBS-------
T ss_pred HHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhcc-------
Confidence 999875432 389999999999999999999999999999999999999999999999999986643211
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccC
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQ 718 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~ 718 (791)
......||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 181 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~- 230 (314)
T 3com_A 181 -----------------------------KRNTVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADIHP- 230 (314)
T ss_dssp -----------------------------CBCCCCSCGGGCCHHHHSSSCBCTTHHHHHHHHHHHHHHHSSCTTTTSCH-
T ss_pred -----------------------------ccCccCCCCCccChhhcCCCCCCccccHHHHHHHHHHHHhCCCCCCCCCh-
Confidence 01123589999999999998999999999999999999999999964311
Q ss_pred CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 719 GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 719 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... ...........+......+..+.+++.+||+.||++|||+.++++
T Consensus 231 --------~~~-~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rpt~~~ll~ 278 (314)
T 3com_A 231 --------MRA-IFMIPTNPPPTFRKPELWSDNFTDFVKQCLVKSPEQRATATQLLQ 278 (314)
T ss_dssp --------HHH-HHHHHHSCCCCCSSGGGSCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred --------HHH-HHHHhcCCCcccCCcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 001 111111111112222224567889999999999999999999986
No 188
>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*
Probab=100.00 E-value=6.1e-39 Score=341.84 Aligned_cols=243 Identities=22% Similarity=0.330 Sum_probs=199.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+. .+++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++||||+++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 106 (303)
T 3a7i_A 27 LEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGS 106 (303)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred hhhhcccCCeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEEeCCCCc
Confidence 46899999999999984 568999999996542 3446789999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 107 L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~------ 174 (303)
T 3a7i_A 107 ALDLLEPG------PLDETQIATILREILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI------ 174 (303)
T ss_dssp HHHHHTTS------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBC------
T ss_pred HHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCcccc------
Confidence 99988642 389999999999999999999999999999999999999999999999999987643211
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELG 717 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~ 717 (791)
......||+.|+|||++.+..++.++||||||+++|||++|+.||.....
T Consensus 175 ------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~ 224 (303)
T 3a7i_A 175 ------------------------------KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPPHSELHP 224 (303)
T ss_dssp ------------------------------CBCCCCSCGGGCCHHHHTTCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCH
T ss_pred ------------------------------ccCccCCCcCccCHHHHhcCCCCchhhhHHHHHHHHHHccCCCCCCCcCH
Confidence 01133589999999999999999999999999999999999999864311
Q ss_pred CCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 718 QGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 718 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
. ............... ......+.+++.+||+.||++|||+.|+++.
T Consensus 225 ---------~-~~~~~~~~~~~~~~~--~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 271 (303)
T 3a7i_A 225 ---------M-KVLFLIPKNNPPTLE--GNYSKPLKEFVEACLNKEPSFRPTAKELLKH 271 (303)
T ss_dssp ---------H-HHHHHHHHSCCCCCC--SSCCHHHHHHHHHHCCSSGGGSCCHHHHTTC
T ss_pred ---------H-HHHHHhhcCCCCCCc--cccCHHHHHHHHHHcCCChhhCcCHHHHhhC
Confidence 0 111111111111111 1244678899999999999999999999874
No 189
>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*
Probab=100.00 E-value=2.1e-39 Score=351.60 Aligned_cols=258 Identities=20% Similarity=0.272 Sum_probs=200.2
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhc--cCCCCccceeeEEEccC----ceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAK--LVHPNLVRIRGFYWGVD----EKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~--l~H~nIv~l~~~~~~~~----~~~lv~e~ 552 (791)
..+.||+|+||.||+|+. +|+.||||++.... .+.+.+|+++++. ++||||+++++++...+ ..++||||
T Consensus 46 ~~~~lg~G~~g~Vy~~~~-~~~~vavK~~~~~~---~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~~~~~~~~~lv~e~ 121 (342)
T 1b6c_B 46 LQESIGKGRFGEVWRGKW-RGEEVAVKIFSSRE---ERSWFREAEIYQTVMLRHENILGFIAADNKDNGTWTQLWLVSDY 121 (342)
T ss_dssp EEEEEEEETTEEEEEEEE-TTEEEEEEEECGGG---HHHHHHHHHHHHHSCCCCTTBCCEEEEEECCCSSCCCEEEEECC
T ss_pred EEeeecCCCCcEEEEEEE-cCccEEEEEeCchh---HHHHHHHHHHHHHhhcCCCcEEEEEeeecccCCccceeEEEEee
Confidence 357899999999999998 58999999997542 3567788888887 78999999999998876 78999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--------cCCCeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLH--------EKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH--------~~~ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
+++|+|.+++... .+++..++.++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++
T Consensus 122 ~~~g~L~~~l~~~------~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~ 195 (342)
T 1b6c_B 122 HEHGSLFDYLNRY------TVTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAV 195 (342)
T ss_dssp CTTCBHHHHHHHC------CBCHHHHHHHHHHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCE
T ss_pred cCCCcHHHHHhcc------CccHHHHHHHHHHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCce
Confidence 9999999999754 2899999999999999999999 8999999999999999999999999999998
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC------CCCchhhHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK------PNPKWDVYSF 698 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~------~~~~sDvwSl 698 (791)
.......... .......||+.|+|||++.+.. ++.++|||||
T Consensus 196 ~~~~~~~~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~Di~sl 243 (342)
T 1b6c_B 196 RHDSATDTID--------------------------------IAPNHRVGTKRYMAPEVLDDSINMKHFESFKRADIYAM 243 (342)
T ss_dssp EEETTTTEEE--------------------------------ECCCSCCCCGGGCCHHHHTSCCCTTCHHHHHHHHHHHH
T ss_pred eccccccccc--------------------------------cccccCCcCcccCCHhhhcccccccccccCCcccHHHH
Confidence 7653321100 0112345999999999997652 3368999999
Q ss_pred HHHHHHHHhC----------CcchhccccCCCCcchhchhHHHH-HHHHhhhcCccc---hHHHHHHHHHHHhhccCCCC
Q 003847 699 GVILLELLTG----------KVIVVDELGQGNGLLVEDKNRAIR-LADAAIRADFEG---KEEALLSCFKLGYSCASPLP 764 (791)
Q Consensus 699 Gvil~elltG----------~~pf~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~l~~li~~cl~~dP 764 (791)
||++|||++| +.||......... ...... +.........+. ..+....+.+++.+||+.||
T Consensus 244 G~il~el~tg~~~~~~~~~~~~p~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dp 318 (342)
T 1b6c_B 244 GLVFWEIARRCSIGGIHEDYQLPYYDLVPSDPS-----VEEMRKVVCEQKLRPNIPNRWQSCEALRVMAKIMRECWYANG 318 (342)
T ss_dssp HHHHHHHHTTBCBTTBCCCCCCTTTTTSCSSCC-----HHHHHHHHTTSCCCCCCCGGGGTSHHHHHHHHHHHHHCCSSG
T ss_pred HHHHHHHHhccCcCCcccccccCccccCcCccc-----HHHHHHHHHHHHhCCCCcccccchhHHHHHHHHHHHHhccCh
Confidence 9999999999 5666543211110 001111 111112222221 12466789999999999999
Q ss_pred CCCCCHHHHHHHhccCCCC
Q 003847 765 QKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 765 ~~RPs~~evl~~L~~i~~~ 783 (791)
++|||+.||++.|++|...
T Consensus 319 ~~Rps~~~i~~~L~~i~~~ 337 (342)
T 1b6c_B 319 AARLTALRIKKTLSQLSQQ 337 (342)
T ss_dssp GGSCCHHHHHHHHHHHHHT
T ss_pred hhCCCHHHHHHHHHHHHHH
Confidence 9999999999999987543
No 190
>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*
Probab=100.00 E-value=6.4e-39 Score=355.08 Aligned_cols=253 Identities=19% Similarity=0.223 Sum_probs=195.8
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC--------CCCccceeeEEE----ccCc
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLV--------HPNLVRIRGFYW----GVDE 545 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--------H~nIv~l~~~~~----~~~~ 545 (791)
..+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++ |+||+++++++. ....
T Consensus 41 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~~~~~~~~ 119 (397)
T 1wak_A 41 VIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAE-HYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTH 119 (397)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEEEETTEEE
T ss_pred EEEEeeecCCeeEEEEEecCCCeEEEEEEEecCC-cchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceeecCCCCce
Confidence 346899999999999984 568999999997543 34567889999999985 788999999998 5567
Q ss_pred eEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCeecCCCCCCeEecCCC-----------
Q 003847 546 KLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDM----------- 613 (791)
Q Consensus 546 ~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~ivHrDlkp~NILl~~~~----------- 613 (791)
.++||||+ +++|.+++...... .+++..++.|+.||+.||+|||++ ||+||||||+|||++.++
T Consensus 120 ~~lv~e~~-~~~l~~~~~~~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~ 195 (397)
T 1wak_A 120 ICMVFEVL-GHHLLKWIIKSNYQ---GLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEAT 195 (397)
T ss_dssp EEEEECCC-CCBHHHHHHHTTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC
T ss_pred EEEEEecc-CccHHHHHHhcccC---CCCHHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhH
Confidence 89999999 66776766554322 399999999999999999999998 999999999999999775
Q ss_pred --------------------------------------CeEEeccCcccccCCCCCCCcCCCCccccCCccccccccccc
Q 003847 614 --------------------------------------EPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQ 655 (791)
Q Consensus 614 --------------------------------------~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 655 (791)
.+||+|||+++.....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~-------------------------- 249 (397)
T 1wak_A 196 EWQRSGAPPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH-------------------------- 249 (397)
T ss_dssp ---------------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBC--------------------------
T ss_pred HHhhcCCCCCCCCccccCCcccccccccccccccccccceEecccccccccccc--------------------------
Confidence 7999999999865421
Q ss_pred CCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHH
Q 003847 656 DLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLAD 735 (791)
Q Consensus 656 ~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~ 735 (791)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||.......................
T Consensus 250 -------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~ 316 (397)
T 1wak_A 250 -------------FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLG 316 (397)
T ss_dssp -------------SCSCCSCGGGCCHHHHHTSCCCTHHHHHHHHHHHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHC
T ss_pred -------------CccCCCCCcccCChhhcCCCCCcHHHHHHHHHHHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcC
Confidence 1123589999999999999999999999999999999999999975433222111111000000000
Q ss_pred -----------------------------------HhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 736 -----------------------------------AAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 736 -----------------------------------~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
..+...+.........+.+|+.+||+.||++|||++|+++
T Consensus 317 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~e~l~ 391 (397)
T 1wak_A 317 KVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWGLFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLR 391 (397)
T ss_dssp SCCHHHHHHCTTGGGTBCTTSSBSSCCCCCCCCHHHHHHHTSCCCHHHHHHHHHHHGGGGCSSGGGSCCHHHHHT
T ss_pred CCChHHhhcccccccccCCccccccccccCCcchhHhhhhhcccchhhHHHHHHHHHHHhccChhhcCCHHHHhh
Confidence 0001112223456778999999999999999999999986
No 191
>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...
Probab=100.00 E-value=5.4e-39 Score=337.17 Aligned_cols=247 Identities=20% Similarity=0.267 Sum_probs=197.9
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+.. +++.||||++... .....+.+.+|+.++++++||||+++++++.+.+..++||||+++++
T Consensus 12 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~ 91 (276)
T 2yex_A 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGE 91 (276)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCTTEE
T ss_pred EEEeecCCCcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEEEcCCEEEEEEEecCCCc
Confidence 468999999999999964 7899999998654 23445788999999999999999999999999999999999999999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 92 L~~~l~~~~-----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~----- 161 (276)
T 2yex_A 92 LFDRIEPDI-----GMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRE----- 161 (276)
T ss_dssp GGGGSBTTT-----BCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEE-----
T ss_pred HHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcch-----
Confidence 999876432 3899999999999999999999999999999999999999999999999999865422110
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
.......||+.|+|||++.+..+ +.++||||||+++|||++|+.||....
T Consensus 162 -----------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~ 212 (276)
T 2yex_A 162 -----------------------------RLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS 212 (276)
T ss_dssp -----------------------------CCBCCCCSCGGGCCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred -----------------------------hcccCCccccCccChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence 01123458999999999987665 779999999999999999999996532
Q ss_pred cCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
... .......... ............+.+++.+||+.||++|||++|+++
T Consensus 213 ~~~--------~~~~~~~~~~--~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 261 (276)
T 2yex_A 213 DSC--------QEYSDWKEKK--TYLNPWKKIDSAPLALLHKILVENPSARITIPDIKK 261 (276)
T ss_dssp TTS--------HHHHHHHTTC--TTSTTGGGSCHHHHHHHHHHSCSSTTTSCCHHHHTT
T ss_pred hHH--------HHHHHhhhcc--cccCchhhcCHHHHHHHHHHCCCCchhCCCHHHHhc
Confidence 210 0011111110 011111224567889999999999999999999986
No 192
>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*
Probab=100.00 E-value=3.8e-39 Score=347.39 Aligned_cols=257 Identities=22% Similarity=0.322 Sum_probs=200.0
Q ss_pred cceeccccCceEEEEEEe------CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 479 SAYILGASGSSIMYKAVL------EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~------~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
..+.||+|+||.||+|+. .+++.||||++... ......++.+|+.++++++||||+++++++...+..++|||
T Consensus 34 ~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 113 (327)
T 2yfx_A 34 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILME 113 (327)
T ss_dssp EEEECC--CSSCEEEEEC--------CCEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSSSCEEEEE
T ss_pred EEEEEcCCCCeeEEEEEEcCCCCCCccceEEEEEeccccchhhHHHHHHHHHHHhhCCCCCCCeEEEEEcCCCCcEEEEe
Confidence 346899999999999983 35789999999754 34455678999999999999999999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCC--CCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC---CCCeEEeccCccccc
Q 003847 552 FVPNGSLANARYRKMGSS--PCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLV 626 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~--~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---~~~~kL~DFGla~~~ 626 (791)
|+++++|.+++....... ...+++..++.++.|++.||+|||+.||+||||||+|||++. +..+||+|||+++..
T Consensus 114 ~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~ 193 (327)
T 2yfx_A 114 LMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI 193 (327)
T ss_dssp CCTTEEHHHHHHHTSCCSSSTTSCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred cCCCCcHHHHHHhhcccccccccccHHHHHHHHHHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECcccccccc
Confidence 999999999998764321 134899999999999999999999999999999999999984 446999999999865
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ell 706 (791)
....... ......||+.|+|||++.+..++.++||||||+++|||+
T Consensus 194 ~~~~~~~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ell 239 (327)
T 2yfx_A 194 YRASYYR----------------------------------KGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239 (327)
T ss_dssp HC----------------------------------------CCGGGSCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccc----------------------------------cCCCcCCCcceeCHhHhcCCCCCchhhHHHHHHHHHHHH
Confidence 4322110 011234788999999999889999999999999999999
Q ss_pred h-CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 707 T-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 707 t-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
| |+.||..... ............ .......+..+.+++.+||+.||++||++.|+++.|+.+.
T Consensus 240 t~g~~p~~~~~~----------~~~~~~~~~~~~--~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~l~~~~ 303 (327)
T 2yfx_A 240 SLGYMPYPSKSN----------QEVLEFVTSGGR--MDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERIEYCT 303 (327)
T ss_dssp TTSCCSSTTCCH----------HHHHHHHHTTCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred cCCCCCCCCcCH----------HHHHHHHhcCCC--CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHh
Confidence 8 8889865311 111111111111 1112224567889999999999999999999999998753
No 193
>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7
Probab=100.00 E-value=4.4e-39 Score=349.71 Aligned_cols=248 Identities=21% Similarity=0.221 Sum_probs=192.1
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchh-----hHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVD-----RFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~-----~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
....||+|+||.||+|+. .+|+.||||++...... ..+.+.+|++++++++||||+++++++...+..++||||
T Consensus 14 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 93 (346)
T 1ua2_A 14 KLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDF 93 (346)
T ss_dssp EEEEEEEETTEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEECCTTCCEEEEEC
T ss_pred EEeEEeecCCEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEEeeCCceEEEEEc
Confidence 346899999999999995 46899999999753221 124678999999999999999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++ +|.+++..... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 94 ~~~-~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~- 167 (346)
T 1ua2_A 94 MET-DLEVIIKDNSL----VLTPSHIKAYMLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNR- 167 (346)
T ss_dssp CSE-EHHHHHTTCCS----SCCSSHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCC-
T ss_pred CCC-CHHHHHHhcCc----CCCHHHHHHHHHHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcc-
Confidence 975 88888765432 388899999999999999999999999999999999999999999999999986542211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~p 711 (791)
.....+||+.|+|||++.+ ..++.++|||||||++|||++|.+|
T Consensus 168 -----------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~ 212 (346)
T 1ua2_A 168 -----------------------------------AYTHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPF 212 (346)
T ss_dssp -----------------------------------CCCCSCCCCTTCCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred -----------------------------------cCCcccccccccCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCC
Confidence 1123458999999999975 4589999999999999999999999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhc------------------Ccc------chHHHHHHHHHHHhhccCCCCCCC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRA------------------DFE------GKEEALLSCFKLGYSCASPLPQKR 767 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------~~~------~~~~~~~~l~~li~~cl~~dP~~R 767 (791)
|..... ......+....... ..+ ........+.+|+.+||+.||++|
T Consensus 213 ~~~~~~---------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R 283 (346)
T 1ua2_A 213 LPGDSD---------LDQLTRIFETLGTPTEEQWPDMCSLPDYVTFKSFPGIPLHHIFSAAGDDLLDLIQGLFLFNPCAR 283 (346)
T ss_dssp SCCSSH---------HHHHHHHHHHHCCCCTTTSSSTTSSTTCCCCCCCCCCCHHHHCTTCCHHHHHHHHHHHCSSTTTS
T ss_pred CCCCCH---------HHHHHHHHHHcCCCChhhhhhhccCcccccccccCCCChHHhhccCCHHHHHHHHHHhccChhhC
Confidence 865321 01111111110000 000 001134678999999999999999
Q ss_pred CCHHHHHHH
Q 003847 768 PSMKEALQA 776 (791)
Q Consensus 768 Ps~~evl~~ 776 (791)
||+.|+++.
T Consensus 284 pt~~ell~h 292 (346)
T 1ua2_A 284 ITATQALKM 292 (346)
T ss_dssp CCHHHHHTS
T ss_pred CCHHHHhcC
Confidence 999999975
No 194
>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*
Probab=100.00 E-value=1.1e-38 Score=347.50 Aligned_cols=254 Identities=19% Similarity=0.222 Sum_probs=193.0
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEcc--------CceEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV--------DEKLI 548 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~--------~~~~l 548 (791)
.+.||+|+||.||+|+. .+|+.||||++.... ......+.+|++++++++||||+++++++... +..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~l 101 (351)
T 3mi9_A 22 LAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYL 101 (351)
T ss_dssp EEECSSCSTTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEE
T ss_pred EEEEecCCCcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEE
Confidence 46899999999999996 579999999986542 22245788999999999999999999999873 46899
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
||||+++ +|.+.+..... .+++.+++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.+..
T Consensus 102 v~e~~~~-~l~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~ 176 (351)
T 3mi9_A 102 VFDFCEH-DLAGLLSNVLV----KFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSL 176 (351)
T ss_dssp EEECCSE-EHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCC
T ss_pred EEeccCC-CHHHHHhhccC----CCCHHHHHHHHHHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccc
Confidence 9999974 77777765432 399999999999999999999999999999999999999999999999999987653
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHh
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~ellt 707 (791)
..... ........||+.|+|||++.+ ..++.++|||||||++|||++
T Consensus 177 ~~~~~--------------------------------~~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~ 224 (351)
T 3mi9_A 177 AKNSQ--------------------------------PNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT 224 (351)
T ss_dssp CSSSS--------------------------------CCCCCSSCSCGGGCCHHHHTTCCSCCTHHHHHHHHHHHHHHHH
T ss_pred ccccc--------------------------------ccccCCcccccCccCchhhcCCCCCCcHhHHHHHHHHHHHHHh
Confidence 22111 011234568999999999876 457999999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHH---Hhhhc----------------CccchHH------HHHHHHHHHhhccCC
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLAD---AAIRA----------------DFEGKEE------ALLSCFKLGYSCASP 762 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~---~~~~~----------------~~~~~~~------~~~~l~~li~~cl~~ 762 (791)
|+.||.......... ....... ..... ......+ ....+.+|+.+||+.
T Consensus 225 g~~pf~~~~~~~~~~------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~ 298 (351)
T 3mi9_A 225 RSPIMQGNTEQHQLA------LISQLCGSITPEVWPNVDNYELYEKLELVKGQKRKVKDRLKAYVRDPYALDLIDKLLVL 298 (351)
T ss_dssp SSCSCCCSSHHHHHH------HHHHHHCCCCTTTSTTGGGCGGGTSSCCCSSCCCCHHHHHHHHHCCHHHHHHHHHHSCS
T ss_pred CCCCCCCCChHHHHH------HHHHHhCCCChhhccccccchhhcccccccccccCHHHHhhhccCChHHHHHHHHHhcC
Confidence 999986532110000 0000000 00000 0000000 134578999999999
Q ss_pred CCCCCCCHHHHHHH
Q 003847 763 LPQKRPSMKEALQA 776 (791)
Q Consensus 763 dP~~RPs~~evl~~ 776 (791)
||++|||++|+++.
T Consensus 299 dP~~R~t~~e~l~h 312 (351)
T 3mi9_A 299 DPAQRIDSDDALNH 312 (351)
T ss_dssp SGGGSCCHHHHHTS
T ss_pred ChhhCCCHHHHhCC
Confidence 99999999999874
No 195
>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...
Probab=100.00 E-value=1.8e-39 Score=354.83 Aligned_cols=254 Identities=22% Similarity=0.323 Sum_probs=199.2
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
....||+|+||.||+|... +++.||+|++... .....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 116 (360)
T 3eqc_A 37 KISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGG 116 (360)
T ss_dssp EEEEEEECSSCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEETTEEEEEECCCTTC
T ss_pred eeeeecCCCCeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEEEECCEEEEEEECCCCC
Confidence 3568999999999999954 7899999999765 3444578999999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
+|.+++.... .+++..+..++.|++.||+|||+. ||+||||||+|||++.++.+||+|||++.......
T Consensus 117 ~L~~~l~~~~-----~~~~~~~~~i~~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~----- 186 (360)
T 3eqc_A 117 SLDQVLKKAG-----RIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM----- 186 (360)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC-----
T ss_pred CHHHHHHHcC-----CCCHHHHHHHHHHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCccccccc-----
Confidence 9999998764 389999999999999999999995 99999999999999999999999999987653211
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
.....||+.|+|||++.+..++.++|||||||++|||++|+.||...
T Consensus 187 ---------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 233 (360)
T 3eqc_A 187 ---------------------------------ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPP 233 (360)
T ss_dssp -------------------------------------CCCCTTCCHHHHTTCCCSHHHHHHHHHHHHHHHHHTSCCSSCC
T ss_pred ---------------------------------ccCCCCCCCeECHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCC
Confidence 11235899999999999999999999999999999999999998643
Q ss_pred ccCCCCcch-----------------------------hchhHHHHHHHHhhhcCcc--chHHHHHHHHHHHhhccCCCC
Q 003847 716 LGQGNGLLV-----------------------------EDKNRAIRLADAAIRADFE--GKEEALLSCFKLGYSCASPLP 764 (791)
Q Consensus 716 ~~~~~~~~~-----------------------------~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~dP 764 (791)
......... .......+..+........ ........+.+|+.+||+.||
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 313 (360)
T 3eqc_A 234 DAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNP 313 (360)
T ss_dssp CHHHHHHHHC------------------------------CCCHHHHHHHHHHSCCCCCCTTTSCHHHHHHHHHHHCSST
T ss_pred CHHHHHHHhcccccccCCCCCCCcccCCCcccccccCCCCcccchhhhhHHhccCCCCCCcccccHHHHHHHHHHhhcCh
Confidence 211000000 0000001111111111111 011134578899999999999
Q ss_pred CCCCCHHHHHH
Q 003847 765 QKRPSMKEALQ 775 (791)
Q Consensus 765 ~~RPs~~evl~ 775 (791)
++|||++|+++
T Consensus 314 ~~Rpt~~ell~ 324 (360)
T 3eqc_A 314 AERADLKQLMV 324 (360)
T ss_dssp TTSCCHHHHHT
T ss_pred hhCCCHHHHhh
Confidence 99999999986
No 196
>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*
Probab=100.00 E-value=1e-38 Score=337.02 Aligned_cols=242 Identities=21% Similarity=0.252 Sum_probs=193.2
Q ss_pred cceeccccCceEEEEEEeC-CCcEEEEEEcCCC--chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccC
Q 003847 479 SAYILGASGSSIMYKAVLE-DGTALAVRRIGEN--SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
..+.||+|+||.||+|+.. +++.||||++... ......++.+|+..+.++ +||||+++++++.+.+..++||||++
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~ 94 (289)
T 1x8b_A 15 ELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAWAEDDHMLIQNEYCN 94 (289)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEEEETTEEEEEEECCT
T ss_pred hhhhhcCCCceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEEEecC
Confidence 3568999999999999964 7999999998753 233456788999999999 99999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC-------------------CCe
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-------------------MEP 615 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~-------------------~~~ 615 (791)
+++|.+++....... ..+++..++.|+.||+.||+|||+.||+||||||+||+++.+ ..+
T Consensus 95 ~~~L~~~l~~~~~~~-~~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (289)
T 1x8b_A 95 GGSLADAISENYRIM-SYFKEAELKDLLLQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMF 173 (289)
T ss_dssp TCBHHHHHHHHHHHT-CCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCE
T ss_pred CCcHHHHHHhhcccc-cCCCHHHHHHHHHHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEE
Confidence 999999997653211 148999999999999999999999999999999999999844 479
Q ss_pred EEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchh
Q 003847 616 KIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWD 694 (791)
Q Consensus 616 kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sD 694 (791)
||+|||.+....... ...||+.|+|||++.+. .++.++|
T Consensus 174 kl~Dfg~~~~~~~~~----------------------------------------~~~gt~~y~aPE~~~~~~~~~~~~D 213 (289)
T 1x8b_A 174 KIGDLGHVTRISSPQ----------------------------------------VEEGDSRFLANEVLQENYTHLPKAD 213 (289)
T ss_dssp EECCCTTCEETTCSC----------------------------------------CCCCCGGGCCHHHHTTCCTTHHHHH
T ss_pred EEcccccccccCCcc----------------------------------------ccCCCccccChhHhcCCCCCCchhh
Confidence 999999988654211 12389999999999765 5668999
Q ss_pred hHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 695 VYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 695 vwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
||||||++|||++|.+++.... ....+..... ...+ ......+.+++.+||+.||++|||+.|++
T Consensus 214 i~slG~il~~l~~~~~~~~~~~------------~~~~~~~~~~-~~~~--~~~~~~~~~li~~~l~~dp~~Rps~~~ll 278 (289)
T 1x8b_A 214 IFALALTVVCAAGAEPLPRNGD------------QWHEIRQGRL-PRIP--QVLSQEFTELLKVMIHPDPERRPSAMALV 278 (289)
T ss_dssp HHHHHHHHHHHTTCCCCCSSSH------------HHHHHHTTCC-CCCS--SCCCHHHHHHHHHHTCSSGGGSCCHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCcchh------------HHHHHHcCCC-CCCC--cccCHHHHHHHHHHhCCCcccCCCHHHHh
Confidence 9999999999999998653320 1111111111 1111 12456788999999999999999999998
Q ss_pred HH
Q 003847 775 QA 776 (791)
Q Consensus 775 ~~ 776 (791)
+.
T Consensus 279 ~h 280 (289)
T 1x8b_A 279 KH 280 (289)
T ss_dssp TC
T ss_pred hC
Confidence 63
No 197
>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=349.21 Aligned_cols=255 Identities=18% Similarity=0.186 Sum_probs=187.9
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhh-HHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDR-FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+.. +++.||||++....... ...+.+|++++++++||||+++++++...+..++||||++ |+
T Consensus 7 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~-~~ 85 (324)
T 3mtl_A 7 LDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLD-KD 85 (324)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEEECSSCEEEEEECCS-EE
T ss_pred EEEEcCCCCEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEEeeCCEEEEEecccc-cC
Confidence 468999999999999964 78999999997543221 1245679999999999999999999999999999999997 58
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCC
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGG 637 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~ 637 (791)
|.+++..... .+++..++.++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 86 l~~~~~~~~~----~~~~~~~~~~~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~------ 155 (324)
T 3mtl_A 86 LKQYLDDCGN----IINMHNVKLFLFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK------ 155 (324)
T ss_dssp HHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC-----------
T ss_pred HHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCcc------
Confidence 9988876542 389999999999999999999999999999999999999999999999999976432111
Q ss_pred CccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchhccc
Q 003847 638 SARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVVDEL 716 (791)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~~~~ 716 (791)
......||+.|+|||++.+ ..++.++|||||||++|||++|+.||.+..
T Consensus 156 ------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~ 205 (324)
T 3mtl_A 156 ------------------------------TYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGST 205 (324)
T ss_dssp -------------------------------------CGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSS
T ss_pred ------------------------------ccccccCcccccChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence 1123358999999999876 568999999999999999999999996532
Q ss_pred cCCCCcc------------hhchhHHHHHHHHhhhcC-----ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 717 GQGNGLL------------VEDKNRAIRLADAAIRAD-----FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 717 ~~~~~~~------------~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
....... .................. ..........+.+|+.+||+.||++|||++|+++
T Consensus 206 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 281 (324)
T 3mtl_A 206 VEEQLHFIFRILGTPTEETWPGILSNEEFKTYNYPKYRAEALLSHAPRLDSDGADLLTKLLQFEGRNRISAEDAMK 281 (324)
T ss_dssp HHHHHHHHHHHHCCCCTTTSTTGGGCHHHHHTCCCCCCCCCHHHHCTTSCHHHHHHHHHHSCSSGGGSCCHHHHTT
T ss_pred HHHHHHHHHHHhCCCChHhchhhhcchhhcccccccccchhhhhhcCCCCHHHHHHHHHHcCcCcccCCCHHHHhc
Confidence 1100000 000000000000000000 0000112456789999999999999999999987
No 198
>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*
Probab=100.00 E-value=1e-38 Score=339.15 Aligned_cols=245 Identities=24% Similarity=0.298 Sum_probs=196.8
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc---------hhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS---------VDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLI 548 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~---------~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~l 548 (791)
...||+|+||.||+|.. .+|+.||||++.... ....+.+.+|+++++++. ||||+++++++...+..++
T Consensus 22 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~l 101 (298)
T 1phk_A 22 KEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFL 101 (298)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEEECSSEEEE
T ss_pred eeeecCCCceEEEEEEEcCcCceEEEEEEecccccccCHHHHHHHHHHHHHHHHHHHHhcCCCCEeeeeeeeccCCeEEE
Confidence 46899999999999996 468999999986532 122456889999999995 9999999999999999999
Q ss_pred EEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCC
Q 003847 549 IYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 549 v~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~ 628 (791)
||||+++++|.+++.... .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||++.....
T Consensus 102 v~e~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~ 176 (298)
T 1phk_A 102 VFDLMKKGELFDYLTEKV-----TLSEKETRKIMRALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP 176 (298)
T ss_dssp EEECCTTCBHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCT
T ss_pred EEeccCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCC
Confidence 999999999999998754 389999999999999999999999999999999999999999999999999987543
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc------CCCCCCchhhHHHHHHH
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR------SIKPNPKWDVYSFGVIL 702 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~------~~~~~~~sDvwSlGvil 702 (791)
... .....||+.|+|||++. ...++.++||||||+++
T Consensus 177 ~~~-------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~Di~slG~~l 219 (298)
T 1phk_A 177 GEK-------------------------------------LREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIM 219 (298)
T ss_dssp TCC-------------------------------------BCCCCSCGGGCCHHHHHHHHCTTSCCBCTHHHHHHHHHHH
T ss_pred Ccc-------------------------------------cccccCCccccCHHHhccccccccccCCcccccHhHHHHH
Confidence 211 11235899999999985 45678999999999999
Q ss_pred HHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 703 LELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 703 ~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
|||++|+.||..... ......+.........+.....+..+.+++.+||+.||++|||+.|+++
T Consensus 220 ~~l~~g~~p~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (298)
T 1phk_A 220 YTLLAGSPPFWHRKQ---------MLMLRMIMSGNYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALA 283 (298)
T ss_dssp HHHHHSSCSSCCSSH---------HHHHHHHHHTCCCCCTTTGGGSCHHHHHHHHHHCCSSGGGSCCHHHHTT
T ss_pred HHHHHCCCCCcCccH---------HHHHHHHhcCCcccCcccccccCHHHHHHHHHHccCCcccCCCHHHHHh
Confidence 999999999854311 0111111111111111111234567899999999999999999999986
No 199
>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*
Probab=100.00 E-value=4.8e-39 Score=347.19 Aligned_cols=255 Identities=19% Similarity=0.260 Sum_probs=191.2
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|+||.||+|+.. +|+.||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 30 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~ 109 (331)
T 4aaa_A 30 LGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHT 109 (331)
T ss_dssp EEEGGGGTTSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEETTEEEEEEECCSEE
T ss_pred eeEEeecCCEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEeecCCEEEEEEecCCcc
Confidence 468999999999999954 58999999985542 333466889999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++.... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++.......
T Consensus 110 ~l~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~----- 179 (331)
T 4aaa_A 110 ILDDLELFPN-----GLDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE----- 179 (331)
T ss_dssp HHHHHHHSTT-----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC-------------
T ss_pred hHHHHHhhcc-----CCCHHHHHHHHHHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCcc-----
Confidence 9988765443 389999999999999999999999999999999999999999999999999986543211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+. .++.++|||||||++|||++|+.||...
T Consensus 180 -------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~ 228 (331)
T 4aaa_A 180 -------------------------------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGD 228 (331)
T ss_dssp -----------------------------------CCCCCTTCCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred -------------------------------ccCCCcCCccccCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCC
Confidence 11123589999999999875 7899999999999999999999998654
Q ss_pred ccCCCCcchhc-----hhHHHHHHHHh--hh----c----Ccc---chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 716 LGQGNGLLVED-----KNRAIRLADAA--IR----A----DFE---GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 716 ~~~~~~~~~~~-----~~~~~~~~~~~--~~----~----~~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
........+.. ........... .. . ... .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~ 306 (331)
T 4aaa_A 229 SDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306 (331)
T ss_dssp SHHHHHHHHHHHHCSCCHHHHHHHHHCGGGTTCCCCCCSSCCCHHHHSTTSCHHHHHHHHHHTCSSGGGSCCGGGGGG
T ss_pred CcHHHHHHHHHHhCCCChhhhhHhhhccccccccCccccccchhhhcccchhHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 21100000000 00000000000 00 0 000 00113467899999999999999999999876
No 200
>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*
Probab=100.00 E-value=1.3e-39 Score=342.58 Aligned_cols=252 Identities=23% Similarity=0.283 Sum_probs=198.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEc--cCceEEEEeccC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG--VDEKLIIYDFVP 554 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~--~~~~~lv~e~~~ 554 (791)
.+.||+|+||.||+++. .+++.||+|++... .....+.+.+|++++++++||||+++++++.. .+..++||||++
T Consensus 11 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~~~ 90 (279)
T 2w5a_A 11 LYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCE 90 (279)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEEGGGTEEEEEEECCT
T ss_pred ehhccCCCCcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEecCCCceEEEEEeCCC
Confidence 46899999999999995 47899999999654 33445679999999999999999999998854 567899999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC-----CeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK-----HVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~-----ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
+++|.+++...... ...+++..++.++.|++.||+|||+.+ |+||||||+||+++.++.+||+|||+++.....
T Consensus 91 ~~~L~~~l~~~~~~-~~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~ 169 (279)
T 2w5a_A 91 GGDLASVITKGTKE-RQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD 169 (279)
T ss_dssp TEEHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---
T ss_pred CCCHHHHHHhhccc-CCCCCHHHHHHHHHHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccc
Confidence 99999998765422 124899999999999999999999998 999999999999999999999999999876432
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
... .....||+.|+|||++.+..++.++||||||+++|||++|+
T Consensus 170 ~~~------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~ 213 (279)
T 2w5a_A 170 TSF------------------------------------AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALM 213 (279)
T ss_dssp CHH------------------------------------HHHHHSCCTTCCHHHHHCC-CCHHHHHHHHHHHHHHHHHSS
T ss_pred ccc------------------------------------ccccCCCccccChHHhccCCCCchhhHHHHHHHHHHHHHCC
Confidence 110 00123788999999999989999999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
.||..... ......+... ..... ....+..+.+++.+||+.||++||++.|+++.+..-
T Consensus 214 ~p~~~~~~---------~~~~~~i~~~-~~~~~--~~~~~~~l~~li~~~l~~~p~~Rps~~~ll~~~~~~ 272 (279)
T 2w5a_A 214 PPFTAFSQ---------KELAGKIREG-KFRRI--PYRYSDELNEIITRMLNLKDYHRPSVEEILENPLIL 272 (279)
T ss_dssp CSSCCSSH---------HHHHHHHHHT-CCCCC--CTTSCHHHHHHHHHHTCSSGGGSCCHHHHHTSTTCC
T ss_pred CCCcccCH---------HHHHHHHhhc-ccccC--CcccCHHHHHHHHHHcCCCcccCCCHHHHHhChhhh
Confidence 99865311 0111111111 11111 122456788999999999999999999999877543
No 201
>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*
Probab=100.00 E-value=1.3e-38 Score=355.73 Aligned_cols=192 Identities=21% Similarity=0.263 Sum_probs=166.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc------CCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKL------VHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l------~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.+.||+|+||.||+|.. .+++.||||++.... ...+.+.+|+++++.+ +|+||+++++++...+..++||||
T Consensus 102 ~~~LG~G~fg~V~~a~~~~~~~~vAvK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 180 (429)
T 3kvw_A 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEK-RFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENFTFRNHICMTFEL 180 (429)
T ss_dssp EEEEEESSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEEEETTEEEEEECC
T ss_pred EEEcccCccEEEEEEEECCCCcEEEEEEECCcc-chHHHHHHHHHHHHHHhhccccCCcCEEEEEeecccCCeEEEEEec
Confidence 46899999999999985 468999999997653 3346778888888877 577999999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC--eEEeccCcccccCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME--PKIGDFGLERLVTGDT 630 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~--~kL~DFGla~~~~~~~ 630 (791)
+. ++|.+++...... .+++..++.|+.||+.||+|||+.||+||||||+|||++.++. +||+|||+++.....
T Consensus 181 ~~-~~L~~~l~~~~~~---~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~- 255 (429)
T 3kvw_A 181 LS-MNLYELIKKNKFQ---GFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQR- 255 (429)
T ss_dssp CC-CBHHHHHHHTTTC---CCCHHHHHHHHHHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCC-
T ss_pred cC-CCHHHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCc-
Confidence 95 6999988775432 3899999999999999999999999999999999999999887 999999999754321
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
....+||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 256 --------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltG~~ 297 (429)
T 3kvw_A 256 --------------------------------------VYTYIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297 (429)
T ss_dssp --------------------------------------CCSSCSCGGGCCHHHHHTBCCCTHHHHHHHHHHHHHHHHSSC
T ss_pred --------------------------------------ccccCCCCCccChHHHhCCCCCchHHHHhHHHHHHHHHhCCC
Confidence 113458999999999999999999999999999999999999
Q ss_pred chhcc
Q 003847 711 IVVDE 715 (791)
Q Consensus 711 pf~~~ 715 (791)
||...
T Consensus 298 pf~~~ 302 (429)
T 3kvw_A 298 LLPGE 302 (429)
T ss_dssp SSCCS
T ss_pred CCCCC
Confidence 98654
No 202
>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*
Probab=100.00 E-value=3.4e-39 Score=343.55 Aligned_cols=246 Identities=21% Similarity=0.306 Sum_probs=194.0
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
...||+|+||.||+|+.. +++.||+|++........+.+.+|++++++++||||+++++++...+..++||||+++++|
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~l 103 (302)
T 2j7t_A 24 VGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAV 103 (302)
T ss_dssp EEEEECSTTCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEEECC-CEEEEEECCTTEEH
T ss_pred cceeccCCCeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeeeeeCCeEEEEEEeCCCCcH
Confidence 457999999999999964 5899999999876666678899999999999999999999999999999999999999999
Q ss_pred hHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCC
Q 003847 559 ANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGS 638 (791)
Q Consensus 559 ~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~ 638 (791)
.+++..... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 104 ~~~~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~------- 172 (302)
T 2j7t_A 104 DAIMLELDR----GLTEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQ------- 172 (302)
T ss_dssp HHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHH-------
T ss_pred HHHHHhhcc----CCCHHHHHHHHHHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCcccccccc-------
Confidence 998876432 389999999999999999999999999999999999999999999999999764321100
Q ss_pred ccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccc-----cCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 639 ARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESL-----RSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~-----~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
......||+.|+|||++ .+..++.++||||||+++|||++|+.||.
T Consensus 173 -----------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~ 223 (302)
T 2j7t_A 173 -----------------------------KRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHH 223 (302)
T ss_dssp -----------------------------C-----CCGGGCCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTT
T ss_pred -----------------------------ccccccCChhhcCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCc
Confidence 01123489999999998 46678999999999999999999999986
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.... ........... ..........+..+.+++.+||+.||++|||+.|+++
T Consensus 224 ~~~~---------~~~~~~~~~~~-~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 275 (302)
T 2j7t_A 224 ELNP---------MRVLLKIAKSD-PPTLLTPSKWSVEFRDFLKIALDKNPETRPSAAQLLE 275 (302)
T ss_dssp TSCH---------HHHHHHHHHSC-CCCCSSGGGSCHHHHHHHHHHSCSCTTTSCCHHHHTT
T ss_pred cCCH---------HHHHHHHhccC-CcccCCccccCHHHHHHHHHHcccChhhCCCHHHHhc
Confidence 5311 01111111110 1111112224567889999999999999999999976
No 203
>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*
Probab=100.00 E-value=1.4e-38 Score=356.15 Aligned_cols=214 Identities=21% Similarity=0.314 Sum_probs=162.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEcc-----CceEEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV-----DEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lv~e 551 (791)
.+.||+|+||.||+|+. .+++.||||++... .....+.+.+|++++++++||||+++++++... +..|+|||
T Consensus 31 ~~~lG~G~~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~~~~~~~~~~lv~e 110 (432)
T 3n9x_A 31 KHLIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLE 110 (432)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCTTTCCCEEEEEE
T ss_pred EEEEeecCCEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecCCCCcCCeEEEEEe
Confidence 46899999999999995 56899999999763 334457889999999999999999999999776 56899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|++ ++|.+++.... .+++..++.|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 111 ~~~-~~L~~~~~~~~-----~l~~~~~~~i~~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 184 (432)
T 3n9x_A 111 IAD-SDLKKLFKTPI-----FLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKD 184 (432)
T ss_dssp CCS-EEHHHHHHSSC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC-----
T ss_pred cCC-cCHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCccccccccc
Confidence 996 69999887543 399999999999999999999999999999999999999999999999999997754322
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccc-cCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESL-RSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~-~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.......... ...++ ............+||+.|+|||++ ....++.++|||||||++|||++|..
T Consensus 185 ~~~~~~~~~~-------------~~~~~-~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~ 250 (432)
T 3n9x_A 185 TNIVNDLEEN-------------EEPGP-HNKNLKKQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLNMLQ 250 (432)
T ss_dssp ----------------------------------------CCCCCTTCCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCT
T ss_pred cccccccccc-------------ccccc-cccchhccccCCCCCccccCHHHHhcCCCCCcccccchHHHHHHHHHhccc
Confidence 1100000000 00000 000001123566799999999986 56679999999999999999998766
Q ss_pred chh
Q 003847 711 IVV 713 (791)
Q Consensus 711 pf~ 713 (791)
||.
T Consensus 251 p~~ 253 (432)
T 3n9x_A 251 SHI 253 (432)
T ss_dssp TTC
T ss_pred ccc
Confidence 553
No 204
>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-38 Score=339.88 Aligned_cols=246 Identities=17% Similarity=0.228 Sum_probs=193.4
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCc----hhhHHHHHHHHHHHhccCCCCccceeeEEE--ccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENS----VDRFRDFETQVRVIAKLVHPNLVRIRGFYW--GVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~----~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--~~~~~~lv~e~ 552 (791)
.+.||+|+||.||++.. .+++.||||++.... ....+.+.+|++++++++||||+++++++. +.+..++||||
T Consensus 10 ~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~lv~e~ 89 (305)
T 2wtk_C 10 GDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEY 89 (305)
T ss_dssp CCEEEECSSCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEECC---CEEEEEEC
T ss_pred eeEEecCCCeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEcCCCCeEEEEehh
Confidence 46899999999999995 568999999997642 234578999999999999999999999985 44578999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
++++ |.+++...... .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 90 ~~~~-l~~~~~~~~~~---~~~~~~~~~~~~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~ 165 (305)
T 2wtk_C 90 CVCG-MQEMLDSVPEK---RFPVCQAHGYFCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAAD 165 (305)
T ss_dssp CSEE-HHHHHHHSTTC---SCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSS
T ss_pred ccCC-HHHHHHhCccc---ccCHHHHHHHHHHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCccccc
Confidence 9876 77777654322 4999999999999999999999999999999999999999999999999999876432111
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC--CCchhhHHHHHHHHHHHhCCc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP--NPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~--~~~sDvwSlGvil~elltG~~ 710 (791)
. ......||+.|+|||++.+... +.++||||||+++|||++|+.
T Consensus 166 ~----------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~ 211 (305)
T 2wtk_C 166 D----------------------------------TCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLY 211 (305)
T ss_dssp C----------------------------------EECCCCSCGGGCCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSC
T ss_pred c----------------------------------ccccCCCCCCCcChhhccCcccCCcchhhHHHHHHHHHHHHhCCC
Confidence 0 0112348999999999976443 779999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
||..... .....................+.+++.+||+.||++|||+.|+++.
T Consensus 212 p~~~~~~-------------~~~~~~i~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~~ 264 (305)
T 2wtk_C 212 PFEGDNI-------------YKLFENIGKGSYAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQH 264 (305)
T ss_dssp SCCCSSH-------------HHHHHHHHHCCCCCCSSSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred CCCCchH-------------HHHHHHHhcCCCCCCCccCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 9965311 1111211222222222345678899999999999999999999974
No 205
>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...
Probab=100.00 E-value=1.8e-38 Score=348.17 Aligned_cols=252 Identities=19% Similarity=0.219 Sum_probs=186.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceEEEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv~ 550 (791)
...||+|+||.||+|.. .+++.||||++... .....+.+.+|+.++++++||||+++++++...+ ..++||
T Consensus 30 ~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~lv~ 109 (371)
T 2xrw_A 30 LKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVM 109 (371)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCCSTTTCCEEEEEE
T ss_pred eeeeEecCCEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeeccccccccccceEEEE
Confidence 46899999999999984 46899999999653 3344567889999999999999999999998765 679999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||++ ++|.+++.. .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++......
T Consensus 110 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~ 181 (371)
T 2xrw_A 110 ELMD-ANLCQVIQM-------ELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSF 181 (371)
T ss_dssp ECCS-EEHHHHHHS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC--------
T ss_pred EcCC-CCHHHHHhh-------ccCHHHHHHHHHHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeeccccccccc
Confidence 9996 578877752 28999999999999999999999999999999999999999999999999998653211
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.
T Consensus 182 -------------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~ 224 (371)
T 2xrw_A 182 -------------------------------------MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGV 224 (371)
T ss_dssp ---------------------------------------------CTTCCHHHHTTCCCCTTHHHHHHHHHHHHHHHSSC
T ss_pred -------------------------------------ccCCceecCCccCHHHhcCCCCCchHhHHHHHHHHHHHHhCCC
Confidence 1123458999999999999999999999999999999999999
Q ss_pred chhccccCCCCc------------chhch-hHHHHHHH---------------Hhh-hcCccchHHHHHHHHHHHhhccC
Q 003847 711 IVVDELGQGNGL------------LVEDK-NRAIRLAD---------------AAI-RADFEGKEEALLSCFKLGYSCAS 761 (791)
Q Consensus 711 pf~~~~~~~~~~------------~~~~~-~~~~~~~~---------------~~~-~~~~~~~~~~~~~l~~li~~cl~ 761 (791)
||.+........ ..... ........ ... .............+.+|+.+||.
T Consensus 225 pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~ 304 (371)
T 2xrw_A 225 LFPGTDHIDQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLV 304 (371)
T ss_dssp SSCCSSHHHHHHHHHC-CCCCCHHHHTTSCHHHHHHHHSSCCCCCCCHHHHSCGGGSCCSSHHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHhhCccccccchhhhcccccCcccccccccccHHHHHHHHHHCc
Confidence 996532100000 00000 00000000 000 00001112235678999999999
Q ss_pred CCCCCCCCHHHHHHH
Q 003847 762 PLPQKRPSMKEALQA 776 (791)
Q Consensus 762 ~dP~~RPs~~evl~~ 776 (791)
.||++|||++|+++.
T Consensus 305 ~dP~~R~t~~e~l~h 319 (371)
T 2xrw_A 305 IDASKRISVDEALQH 319 (371)
T ss_dssp SSGGGSCCHHHHHHS
T ss_pred CChhhCCCHHHHhCC
Confidence 999999999999874
No 206
>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*
Probab=100.00 E-value=2.5e-39 Score=342.57 Aligned_cols=256 Identities=23% Similarity=0.360 Sum_probs=193.2
Q ss_pred ceeccccCceEEEEEEeC--CCc--EEEEEEcCCC---chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLE--DGT--ALAVRRIGEN---SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~--~g~--~vavK~~~~~---~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.+.||+|+||.||+|+.. +++ .||||+++.. .....+.+.+|++++++++||||+++++++.... .++||||
T Consensus 23 ~~~lg~G~~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~-~~~v~e~ 101 (291)
T 1u46_A 23 LEKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVLTPP-MKMVTEL 101 (291)
T ss_dssp EEECC----CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEECSSS-CEEEEEC
T ss_pred eeeecCCCceeEEEEEeccCCCceeEEEEEEEccCccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEccCC-ceeeEec
Confidence 468999999999999842 333 6999998754 2344678999999999999999999999997654 8899999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+++++|.+++..... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++.........
T Consensus 102 ~~~~~L~~~l~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~ 177 (291)
T 1u46_A 102 APLGSLLDRLRKHQG----HFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDH 177 (291)
T ss_dssp CTTCBHHHHHHHHGG----GSCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCE
T ss_pred ccCCCHHHHHHhccC----CcCHHHHHHHHHHHHHHHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccc
Confidence 999999999886542 3899999999999999999999999999999999999999999999999999876533211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~p 711 (791)
.. ......||..|+|||++.+..++.++||||||+++|||++ |+.|
T Consensus 178 ~~---------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p 224 (291)
T 1u46_A 178 YV---------------------------------MQEHRKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224 (291)
T ss_dssp EE---------------------------------C-----CCGGGCCHHHHHHCEEEHHHHHHHHHHHHHHHHTTSCCT
T ss_pred hh---------------------------------hhccCCCCceeeCchhhcCCCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 00 1112347888999999998889999999999999999999 9999
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
|..... ......+.... ...+.....+..+.+++.+||+.||++|||+.++++.|+++....
T Consensus 225 ~~~~~~---------~~~~~~~~~~~--~~~~~~~~~~~~l~~li~~~l~~~p~~Rps~~~l~~~l~~~~~~~ 286 (291)
T 1u46_A 225 WIGLNG---------SQILHKIDKEG--ERLPRPEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQPTD 286 (291)
T ss_dssp TTTCCH---------HHHHHHHHTSC--CCCCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHC---
T ss_pred cccCCH---------HHHHHHHHccC--CCCCCCcCcCHHHHHHHHHHccCCcccCcCHHHHHHHHHHhCccc
Confidence 865311 01111111110 111122235567899999999999999999999999999876543
No 207
>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...
Probab=100.00 E-value=1e-38 Score=344.39 Aligned_cols=248 Identities=15% Similarity=0.187 Sum_probs=191.6
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-CCCccceeeEEEc--cCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWG--VDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~--~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+. .+++.||||+++... .+.+.+|++++++++ ||||+++++++.+ ....++||||+++
T Consensus 41 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~---~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~lv~e~~~~ 117 (330)
T 3nsz_A 41 VRKLGRGKYSEVFEAINITNNEKVVVKILKPVK---KKKIKREIKILENLRGGPNIITLADIVKDPVSRTPALVFEHVNN 117 (330)
T ss_dssp EEEEEECSSEEEEEEEETTTCCEEEEEEECSCC---HHHHHHHHHHHHHHTTSTTBCCEEEEEECTTTCCEEEEEECCCC
T ss_pred EEEecccCCeEEEEEEECCCCcEEEEEEecccc---hHHHHHHHHHHHHcCCCCCEEEeeeeeccCCCCceEEEEeccCc
Confidence 46899999999999984 678999999997543 367899999999997 9999999999988 5678999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-CeEEeccCcccccCCCCCCCc
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM-EPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~-~~kL~DFGla~~~~~~~~~~~ 634 (791)
++|.+++.. +++.++..++.||+.||+|||+.||+||||||+|||++.++ .+||+|||+++.......
T Consensus 118 ~~l~~~~~~--------~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~--- 186 (330)
T 3nsz_A 118 TDFKQLYQT--------LTDYDIRFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQE--- 186 (330)
T ss_dssp CCHHHHGGG--------CCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCC---
T ss_pred hhHHHHHHh--------CCHHHHHHHHHHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCc---
Confidence 999887642 88999999999999999999999999999999999999776 899999999986543211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....||..|+|||++.+ ..++.++|||||||++|||++|+.||.
T Consensus 187 ----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~ 232 (330)
T 3nsz_A 187 ----------------------------------YNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFF 232 (330)
T ss_dssp ----------------------------------CCSCCSCGGGCCHHHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSS
T ss_pred ----------------------------------cccccccccccChhhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcc
Confidence 123358999999999977 678999999999999999999999985
Q ss_pred ccccCCCCc-chh---chhHHHHHHHHhhhcC---------------------ccchHHHHHHHHHHHhhccCCCCCCCC
Q 003847 714 DELGQGNGL-LVE---DKNRAIRLADAAIRAD---------------------FEGKEEALLSCFKLGYSCASPLPQKRP 768 (791)
Q Consensus 714 ~~~~~~~~~-~~~---~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~l~~li~~cl~~dP~~RP 768 (791)
......... .+. .........+...... ..........+.+|+.+||+.||++||
T Consensus 233 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rp 312 (330)
T 3nsz_A 233 HGHDNYDQLVRIAKVLGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYDHQSRL 312 (330)
T ss_dssp CCSSHHHHHHHHHHHHCHHHHHHHHHHTTCCCCTHHHHHHCCCCCCCGGGGCCTTTGGGCCHHHHHHHHTTSCSSGGGSC
T ss_pred cCCchHHHHHHHHHhcCCchhhhHHHHhccccccchhhhhhhccccchhhhccccccccCCHHHHHHHHHHhcCCcccCC
Confidence 432110000 000 0000000000000000 000111356789999999999999999
Q ss_pred CHHHHHH
Q 003847 769 SMKEALQ 775 (791)
Q Consensus 769 s~~evl~ 775 (791)
|++|+++
T Consensus 313 ta~e~l~ 319 (330)
T 3nsz_A 313 TAREAME 319 (330)
T ss_dssp CHHHHHT
T ss_pred CHHHHhc
Confidence 9999987
No 208
>2r3i_A Cell division protein kinase 2; serine/threonine-protein kinase, cell cycle, inhibition, cyclin-dependent kinase, cancer, ATP-binding; HET: SCF; 1.28A {Homo sapiens} PDB: 2r3j_A* 2r3k_A* 2r3l_A* 2r3m_A* 2r3n_A* 2r3o_A* 2r3p_A* 2r3q_A* 1jvp_P* 1buh_A 1ckp_A* 1di8_A* 1dm2_A* 1f5q_A 1fin_A* 1fq1_B* 1fvt_A* 1fvv_A* 1g5s_A* 1gih_A* ...
Probab=100.00 E-value=2.8e-38 Score=335.88 Aligned_cols=255 Identities=21% Similarity=0.285 Sum_probs=197.5
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCch--hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSV--DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
.+.||+|+||.||+|+.. +|+.||||++..... ...+.+.+|++++++++||||+++++++...+..++||||++ +
T Consensus 8 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~-~ 86 (299)
T 2r3i_A 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLH-Q 86 (299)
T ss_dssp EEEEEECSSSEEEEEEETTTCCEEEEEEC--------CCHHHHHHHHHHTTCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred hhhhccCCCeeEEEEEEcCCCceEEEEEeecCccchhhHHHHHHHHHHHHHcCCCCeeeEEEEEecCCceEEEEEccc-C
Confidence 468999999999999964 789999999975432 224678899999999999999999999999999999999997 6
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++...... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 87 ~L~~~~~~~~~~---~~~~~~~~~~~~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~----- 158 (299)
T 2r3i_A 87 DLKKFMDASALT---GIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR----- 158 (299)
T ss_dssp EHHHHHHHTTTT---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECSTTHHHHHCCCSB-----
T ss_pred CHHHHHHhhhcc---CCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHeEEcCCCCEEECcchhhhhccCCcc-----
Confidence 999988765432 389999999999999999999999999999999999999999999999999987643211
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCC-CCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIK-PNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~-~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
......||+.|+|||++.+.. ++.++||||||+++|||++|+.||...
T Consensus 159 -------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~ 207 (299)
T 2r3i_A 159 -------------------------------TYTHEVVTLWYRAPEILLGAKYYSTAVDIWSLGCIFAEMVTRRALFPGD 207 (299)
T ss_dssp -------------------------------CTTSCBCCCTTCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCS
T ss_pred -------------------------------ccCcccccccccCcHHhhccccCChHHHHHHHHHHHHHHHhCCCCCCCc
Confidence 011234789999999998755 799999999999999999999999653
Q ss_pred ccCCCCcchhchhHHHHHHHHhh----------------hcCcc---------chHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 716 LGQGNGLLVEDKNRAIRLADAAI----------------RADFE---------GKEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~---------~~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
... .....+..... ...++ ........+.+++.+||+.||++|||+
T Consensus 208 ~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 278 (299)
T 2r3i_A 208 SEI---------DQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 278 (299)
T ss_dssp SHH---------HHHHHHHHHHCCCCTTTSTTGGGSTTCCTTSCCCCCCCHHHHSTTCCHHHHHHHHHHTCSSTTTSCCH
T ss_pred cHH---------HHHHHHHHHhCCCchhhhhHhhcCcccchhhhcccchhhHhhCCCCCHHHHHHHHHhcCcCcccCCCH
Confidence 210 00111111000 00000 001134578899999999999999999
Q ss_pred HHHHH--HhccCCCC
Q 003847 771 KEALQ--ALEKIPSS 783 (791)
Q Consensus 771 ~evl~--~L~~i~~~ 783 (791)
.|+++ .++++...
T Consensus 279 ~~~l~hp~~~~~~~~ 293 (299)
T 2r3i_A 279 KAALAHPFFQDVTKP 293 (299)
T ss_dssp HHHHTSGGGTTCCCC
T ss_pred HHHhcChhhhcCCCC
Confidence 99998 46655543
No 209
>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}
Probab=100.00 E-value=1.9e-38 Score=357.58 Aligned_cols=259 Identities=16% Similarity=0.218 Sum_probs=200.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCC-CCccceeeEEEccCceEEEEeccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVH-PNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H-~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.+.||+|+||.||+|+. .+++.||||++...... +++.+|+++++.++| ++|..+..++...+..++||||+ +++
T Consensus 12 ~~~LG~G~fG~Vy~a~~~~~~~~vAvK~~~~~~~~--~~~~~E~~il~~L~~~~~i~~i~~~~~~~~~~~lvme~~-g~s 88 (483)
T 3sv0_A 12 GRKIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKH--PQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLL-GPS 88 (483)
T ss_dssp CCCCEECSSCEEEEEEETTTCCEEEEEEEETTCSS--CCHHHHHHHHHHTTTSTTCCCEEEEEEETTEEEEEEECC-CCB
T ss_pred EEEEeeCCCEEEEEEEECCCCcEEEEEEecccccc--HHHHHHHHHHHHhcCCCCCCeEEEEEeeCCEEEEEEECC-CCC
Confidence 46899999999999995 67999999987654332 457889999999987 55666666667778889999999 999
Q ss_pred hhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe---cCCCCeEEeccCcccccCCCCCCCc
Q 003847 558 LANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL---GNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 558 L~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl---~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
|.+++..... .+++.+++.|+.||+.||+|||+.|||||||||+|||+ +.++.+||+|||+++.+........
T Consensus 89 L~~ll~~~~~----~l~~~~~~~i~~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~ 164 (483)
T 3sv0_A 89 LEDLFNFCSR----KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQH 164 (483)
T ss_dssp HHHHHHHTTT----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCB
T ss_pred HHHHHHhhcC----CCCHHHHHHHHHHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccc
Confidence 9999875432 39999999999999999999999999999999999999 6889999999999987654322111
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVD 714 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~ 714 (791)
. .........||+.|+|||++.+..++.++|||||||++|||++|+.||.+
T Consensus 165 ~-----------------------------~~~~~~~~~gt~~Y~aPE~~~~~~~s~~sDvwSlGvil~elltG~~Pf~~ 215 (483)
T 3sv0_A 165 I-----------------------------PYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQG 215 (483)
T ss_dssp C-----------------------------CCCCCCCCCSCTTTCCHHHHTTCCCCHHHHHHHHHHHHHHHHHSSCTTSS
T ss_pred c-----------------------------ccccccccCCCccccCHHHhcCCCCChHHHHHHHHHHHHHHHhCCCCCcc
Confidence 0 01122345699999999999999999999999999999999999999976
Q ss_pred cccCCCCcchhchhHHHHHHHHhhhcCccc-hHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccC
Q 003847 715 ELGQGNGLLVEDKNRAIRLADAAIRADFEG-KEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKI 780 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i 780 (791)
....... .....+........... ....+.++.+++..||+.||++||++.+|++.|+++
T Consensus 216 ~~~~~~~------~~~~~i~~~~~~~~~~~l~~~~p~~l~~li~~cl~~dP~~RPs~~el~~~L~~l 276 (483)
T 3sv0_A 216 LKAGTKK------QKYEKISEKKVATSIEALCRGYPTEFASYFHYCRSLRFDDKPDYSYLKRLFRDL 276 (483)
T ss_dssp CCCSSHH------HHHHHHHHHHHHSCHHHHHTTSCHHHHHHHHHHHTCCTTCCCCHHHHHHHHHHH
T ss_pred ccchhHH------HHHHHHhhccccccHHHHhcCCcHHHHHHHHHHhcCChhhCcCHHHHHHHHHHH
Confidence 4221111 11112222221111110 011346789999999999999999999999999876
No 210
>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A
Probab=100.00 E-value=9.1e-39 Score=338.03 Aligned_cols=248 Identities=21% Similarity=0.279 Sum_probs=181.9
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-h-hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS-V-DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~-~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
....||+|+||.||+|+. .+|+.||||++.... . ...+.+.++...++.++||||+++++++.+.+..++||||++
T Consensus 11 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~- 89 (290)
T 3fme_A 11 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMD- 89 (290)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEEECSSSEEEEEECCS-
T ss_pred hHHhcCCCCCeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeeeeccCCEEEEEehhc-
Confidence 356899999999999995 579999999997642 2 222334455556888899999999999999999999999997
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
|+|.+++....... ..+++..++.|+.|++.||+|||++ ||+||||||+||+++.++.+||+|||+++.......
T Consensus 90 ~~l~~~l~~~~~~~-~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--- 165 (290)
T 3fme_A 90 TSLDKFYKQVIDKG-QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVA--- 165 (290)
T ss_dssp EEHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC--------------
T ss_pred cchHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccc---
Confidence 58888776532211 2499999999999999999999997 999999999999999999999999999986543211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccc----cCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESL----RSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~----~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.....||+.|+|||++ .+..++.++||||||+++|||++|+.
T Consensus 166 ----------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~ 211 (290)
T 3fme_A 166 ----------------------------------KDIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF 211 (290)
T ss_dssp --------------------------------------CCCCCCSCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSC
T ss_pred ----------------------------------ccccCCCccccChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCC
Confidence 1123489999999996 56678999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||..... .............. ... ....+..+.+++.+||+.||++|||+.|+++
T Consensus 212 p~~~~~~--------~~~~~~~~~~~~~~-~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~e~l~ 266 (290)
T 3fme_A 212 PYDSWGT--------PFQQLKQVVEEPSP-QLP-ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266 (290)
T ss_dssp SSCCCSC--------HHHHHHHHHHSCCC-CCC-TTTSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CccccCc--------hHHHHHHHhccCCC-Ccc-cccCCHHHHHHHHHHhhcChhhCcCHHHHHh
Confidence 9954211 11111111111111 111 1124567889999999999999999999986
No 211
>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}
Probab=100.00 E-value=1.9e-38 Score=350.68 Aligned_cols=252 Identities=19% Similarity=0.322 Sum_probs=190.0
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCc------eEEEEe
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE------KLIIYD 551 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~~lv~e 551 (791)
...++||+|+||.||+|+...+..||+|++..... ...+|+++++.++||||+++++++...+. .++|||
T Consensus 43 ~~~~~lG~G~~g~V~~a~~~~~~~~aikk~~~~~~----~~~~E~~il~~l~h~niv~l~~~~~~~~~~~~~~~~~lv~e 118 (394)
T 4e7w_A 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKR----FKNRELQIMRIVKHPNVVDLKAFFYSNGDKKDEVFLNLVLE 118 (394)
T ss_dssp EEEEEEEEETTEEEEEEEETTTEEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEESSSSSCEEEEEEEE
T ss_pred EEeEEEeeCCCeEEEEEEECCCCeEEEEEEecCcc----hHHHHHHHHHhCCCCCcceEEEEEEecCCCCCceEEEEEee
Confidence 34578999999999999987777799998865422 22469999999999999999999976543 789999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec-CCCCeEEeccCcccccCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG-NDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~-~~~~~kL~DFGla~~~~~~~ 630 (791)
|++++.+.......... ..+++..++.++.||+.||+|||+.||+||||||+|||++ .++.+||+|||+++......
T Consensus 119 ~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~ 196 (394)
T 4e7w_A 119 YVPETVYRASRHYAKLK--QTMPMLLIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGE 196 (394)
T ss_dssp CCSEEHHHHHHHHHHTT--SCCCHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTC
T ss_pred ccCccHHHHHHHHHhhc--CCCCHHHHHHHHHHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCC
Confidence 99875444433322212 2499999999999999999999999999999999999999 78999999999998764221
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~elltG~ 709 (791)
. .....||+.|+|||++.+. .++.++|||||||++|||++|+
T Consensus 197 ~-------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~ 239 (394)
T 4e7w_A 197 P-------------------------------------NVSYICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239 (394)
T ss_dssp C-------------------------------------CCSSCSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSS
T ss_pred C-------------------------------------CcccccCcCccCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCC
Confidence 1 1234589999999998764 5899999999999999999999
Q ss_pred cchhccccCCCCcchhchhHHHHHHHH--------------hh-hcCcc----------chHHHHHHHHHHHhhccCCCC
Q 003847 710 VIVVDELGQGNGLLVEDKNRAIRLADA--------------AI-RADFE----------GKEEALLSCFKLGYSCASPLP 764 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~~~~~~~~~~~--------------~~-~~~~~----------~~~~~~~~l~~li~~cl~~dP 764 (791)
.||.+.... .....+... .. ...++ ........+.+|+.+||+.||
T Consensus 240 ~pf~~~~~~---------~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP 310 (394)
T 4e7w_A 240 PLFPGESGI---------DQLVEIIKVLGTPSREQIKTMNPNYMEHKFPQIRPHPFSKVFRPRTPPDAIDLISRLLEYTP 310 (394)
T ss_dssp CSSCCSSHH---------HHHHHHHHHHCCCCHHHHHHHCGGGSSSCCCCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSG
T ss_pred CCCCCCCHH---------HHHHHHHHHhCCCCHHHHHhhChhhhhhccccccCCcHHHhccccCCHHHHHHHHHHhCCCh
Confidence 999654211 001111110 00 00000 000134578999999999999
Q ss_pred CCCCCHHHHHHH--hccCC
Q 003847 765 QKRPSMKEALQA--LEKIP 781 (791)
Q Consensus 765 ~~RPs~~evl~~--L~~i~ 781 (791)
++|||+.|+++. ++++.
T Consensus 311 ~~R~t~~e~l~hp~f~~~~ 329 (394)
T 4e7w_A 311 SARLTAIEALCHPFFDELR 329 (394)
T ss_dssp GGSCCHHHHHTSGGGSTTT
T ss_pred hhCCCHHHHhcChhhhhhc
Confidence 999999999974 55543
No 212
>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...
Probab=100.00 E-value=2.3e-38 Score=352.92 Aligned_cols=247 Identities=23% Similarity=0.334 Sum_probs=186.5
Q ss_pred hhcceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccC------ceEEE
Q 003847 477 KASAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVD------EKLII 549 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~------~~~lv 549 (791)
+...++||+|+||.||+|+. .+|+.||||++..... ...+|++++++++|||||+++++|...+ ..++|
T Consensus 56 y~~~~~lG~G~fg~Vy~~~~~~~~~~vaiK~~~~~~~----~~~~E~~il~~l~hpniv~l~~~~~~~~~~~~~~~~~lv 131 (420)
T 1j1b_A 56 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKR----FKNRELQIMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLV 131 (420)
T ss_dssp EEEEEEEEECSSEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHHTCCCTTBCCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeeeEEeeCCCEEEEEEEECCCCcEEEEEEecccch----hHHHHHHHHHHcCCCCccceeeEEeccCCCCcceeEEee
Confidence 34457899999999999996 4699999999865422 2347999999999999999999986432 35789
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC-CCeEEeccCcccccCC
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-MEPKIGDFGLERLVTG 628 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~-~~~kL~DFGla~~~~~ 628 (791)
|||+++ +|.+.+...... ...+++..++.++.||+.||+|||+.||+||||||+|||++.+ +.+||+|||+++.+..
T Consensus 132 ~e~~~~-~l~~~~~~~~~~-~~~l~~~~~~~~~~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~ 209 (420)
T 1j1b_A 132 LDYVPE-TVYRVARHYSRA-KQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR 209 (420)
T ss_dssp EECCCE-EHHHHHHHHHHT-TCCCCHHHHHHHHHHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCT
T ss_pred hhcccc-cHHHHHHHHhhc-cCCCCHHHHHHHHHHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhccc
Confidence 999975 666665432111 1249999999999999999999999999999999999999965 5689999999987542
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHh
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~ellt 707 (791)
... .....||+.|+|||++.+. .++.++|||||||++|||++
T Consensus 210 ~~~-------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~ell~ 252 (420)
T 1j1b_A 210 GEP-------------------------------------NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLL 252 (420)
T ss_dssp TCC-------------------------------------CCSCCSCTTSCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred CCC-------------------------------------ceeeeeCCCcCCHHHHcCCCCCCchhhhHHHHHHHHHHHh
Confidence 211 1234589999999998764 78999999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHh----------hhcC-----cc----------chHHHHHHHHHHHhhccCC
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAA----------IRAD-----FE----------GKEEALLSCFKLGYSCASP 762 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~-----~~----------~~~~~~~~l~~li~~cl~~ 762 (791)
|+.||.+.... ....+++... .... ++ ........+.+|+.+||..
T Consensus 253 G~~pf~~~~~~---------~~l~~i~~~lg~p~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~Li~~~L~~ 323 (420)
T 1j1b_A 253 GQPIFPGDSGV---------DQLVEIIKVLGTPTREQIREMNPNYTEFKFPQIKAHPWTKVFRPRTPPEAIALCSRLLEY 323 (420)
T ss_dssp SSCSSCCSSHH---------HHHHHHHHHHCSCCHHHHHHHCSCCCCCCCCCCCCCCHHHHSCTTSCHHHHHHHHHHSCS
T ss_pred CCCCCCCCCHH---------HHHHHHHHHhCCCCHHHHHhhChhhhhhccCccCCCCHHHhcCCCCCHHHHHHHHHhccC
Confidence 99999654211 0111111100 0000 00 0011246789999999999
Q ss_pred CCCCCCCHHHHHH
Q 003847 763 LPQKRPSMKEALQ 775 (791)
Q Consensus 763 dP~~RPs~~evl~ 775 (791)
||++|||+.|+++
T Consensus 324 dP~~R~t~~e~l~ 336 (420)
T 1j1b_A 324 TPTARLTPLEACA 336 (420)
T ss_dssp SGGGSCCHHHHHT
T ss_pred ChhHCCCHHHHhC
Confidence 9999999999986
No 213
>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...
Probab=100.00 E-value=3.1e-38 Score=345.56 Aligned_cols=257 Identities=20% Similarity=0.250 Sum_probs=193.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEcc-----CceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV-----DEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lv~e~ 552 (791)
...||+|+||.||+|.. .+++.||||++... .....+.+.+|++++++++||||+++++++... ...++||||
T Consensus 32 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~iv~e~ 111 (364)
T 3qyz_A 32 LSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRAPTIEQMKDVYIVQDL 111 (364)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECCSSTTTCCCEEEEEEC
T ss_pred EEEeecCCCeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEecCCccccceEEEEEcc
Confidence 46899999999999995 47899999999754 333457789999999999999999999999765 368999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
++ ++|.+++... .+++..+..|+.||+.||+|||+.||+||||||+|||++.++.+||+|||+++........
T Consensus 112 ~~-~~L~~~l~~~------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~ 184 (364)
T 3qyz_A 112 ME-TDLYKLLKTQ------HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDH 184 (364)
T ss_dssp CS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCB
T ss_pred cC-cCHHHHHHhC------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCc
Confidence 96 5999988653 2899999999999999999999999999999999999999999999999999876432111
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~p 711 (791)
. ......+||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 185 ~---------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~p 231 (364)
T 3qyz_A 185 T---------------------------------GFLTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPI 231 (364)
T ss_dssp C---------------------------------CTTCCCCSCGGGCCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCS
T ss_pred c---------------------------------ccccccccccCCCCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCC
Confidence 0 01223469999999998754 4589999999999999999999999
Q ss_pred hhccccCCCCcchhc------hh--------HHHHHHHHhhhcC-cc---chHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 712 VVDELGQGNGLLVED------KN--------RAIRLADAAIRAD-FE---GKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 712 f~~~~~~~~~~~~~~------~~--------~~~~~~~~~~~~~-~~---~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
|...........+.. .. ............. .+ ........+.+|+.+||+.||++|||+.|+
T Consensus 232 f~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~ 311 (364)
T 3qyz_A 232 FPGKHYLDQLNHILGILGSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQA 311 (364)
T ss_dssp SCCSSGGGHHHHHHHHHCSCCHHHHHTCCCHHHHHHHHTSCCCCCCCHHHHCTTSCHHHHHHHHHHTCSSTTTSCCHHHH
T ss_pred CCCCChHHHHHHHHHHhCCCCHHHHHHhhhhhHHHHHHhcCCccCCCHHHhCCCCCHHHHHHHHHHcCCChhhCCCHHHH
Confidence 965422110000000 00 0000000000000 00 001124568899999999999999999999
Q ss_pred HHH
Q 003847 774 LQA 776 (791)
Q Consensus 774 l~~ 776 (791)
++.
T Consensus 312 l~h 314 (364)
T 3qyz_A 312 LAH 314 (364)
T ss_dssp HTS
T ss_pred hcC
Confidence 873
No 214
>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...
Probab=100.00 E-value=2.2e-38 Score=346.43 Aligned_cols=250 Identities=21% Similarity=0.279 Sum_probs=177.1
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEcc------CceEEEE
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV------DEKLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~------~~~~lv~ 550 (791)
...||+|+||.||+|. ..+|+.||||++... .....+.+.+|++++++++||||+++++++... ...|+|+
T Consensus 34 ~~~lG~G~~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~~~~~~~~~~lv~ 113 (367)
T 2fst_X 34 LSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVT 113 (367)
T ss_dssp EEECC----CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeEEeecCCeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCCccccCCeEEEEe
Confidence 4689999999999998 457899999999753 334456788999999999999999999998754 5679999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||+ +++|.+++... .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 114 e~~-~~~L~~~~~~~------~l~~~~~~~i~~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~- 185 (367)
T 2fst_X 114 HLM-GADLNNIVKCQ------KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE- 185 (367)
T ss_dssp ECC-CEECC-----C------CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC-----------
T ss_pred ccc-CCCHHHHHhcC------CCCHHHHHHHHHHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeecccccccccc-
Confidence 999 78999887652 3999999999999999999999999999999999999999999999999999864321
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~ 709 (791)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 186 --------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~ell~g~ 227 (367)
T 2fst_X 186 --------------------------------------MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227 (367)
T ss_dssp -------------------------------------------CCCTTCCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSS
T ss_pred --------------------------------------CCCcCcCcCccChHHHcCCcCCCchhhHHHHHHHHHHHHhCC
Confidence 112358999999999877 67899999999999999999999
Q ss_pred cchhccccCCCCcchhc--------------hhHHHHHHHHhhhc--Cccch---HHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 710 VIVVDELGQGNGLLVED--------------KNRAIRLADAAIRA--DFEGK---EEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~--~~~~~---~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
.||.+.........+.. ......... .+.. ..... ......+.+|+.+||..||++|||+
T Consensus 228 ~pf~~~~~~~~l~~i~~~~g~p~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~dLl~~mL~~dP~~R~t~ 306 (367)
T 2fst_X 228 TLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQ-SLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITA 306 (367)
T ss_dssp CSCCCSSHHHHHHHHHHHHCSCCHHHHTTCCCHHHHHHHH-TSCCCCCCCHHHHTTTCCHHHHHHHHHHSCSSGGGSCCH
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHHHhhhHHHHHHHh-ccCCCCCCCHHHHCCCCCHHHHHHHHHhCCCCcccCcCH
Confidence 99965321000000000 000000000 0000 00000 0123568899999999999999999
Q ss_pred HHHHHH
Q 003847 771 KEALQA 776 (791)
Q Consensus 771 ~evl~~ 776 (791)
.|+++.
T Consensus 307 ~e~L~h 312 (367)
T 2fst_X 307 AQALAH 312 (367)
T ss_dssp HHHHTS
T ss_pred HHHhcC
Confidence 999874
No 215
>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=340.79 Aligned_cols=245 Identities=20% Similarity=0.312 Sum_probs=189.8
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEc------cCceEEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWG------VDEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~------~~~~~lv~e 551 (791)
.+.||+|+||.||+|+. .+|+.||||++..... ..+.+.+|+.+++++ +||||+++++++.. .+..++|||
T Consensus 29 ~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~-~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~~~~~lv~e 107 (326)
T 2x7f_A 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVME 107 (326)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECCSS-TTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC--CCCCEEEEEEE
T ss_pred EEEeccCCCEEEEEEEECCCCCeEEEEEEecCcc-cHHHHHHHHHHHHhccCCCCeeeeeeEEeeccCccccceEEEEEE
Confidence 46899999999999995 5789999999865433 346789999999999 79999999999987 457899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++++|.+++...... .+++..++.++.||+.||+|||+.||+||||||+||+++.++.+||+|||++........
T Consensus 108 ~~~~~~L~~~l~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~ 184 (326)
T 2x7f_A 108 FCGAGSVTDLIKNTKGN---TLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVG 184 (326)
T ss_dssp CCTTEEHHHHHHHSGGG---CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------
T ss_pred cCCCCcHHHHHHhcccC---CCCHHHHHHHHHHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCcc
Confidence 99999999999865322 389999999999999999999999999999999999999999999999999876542110
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHHHH
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~ell 706 (791)
......||+.|+|||++. +..++.++|||||||++|||+
T Consensus 185 ------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~ 228 (326)
T 2x7f_A 185 ------------------------------------RRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMA 228 (326)
T ss_dssp ------------------------------------------CCGGGCCHHHHC--------CCTTHHHHHHHHHHHHHH
T ss_pred ------------------------------------ccccccCCccccChhhhccccccCcCCCccchHHHHHHHHHHHH
Confidence 011235899999999986 567899999999999999999
Q ss_pred hCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 707 TGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 707 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+|+.||.+... ......+..... ... .....+..+.+++.+||..||++||++.|+++
T Consensus 229 ~g~~p~~~~~~---------~~~~~~~~~~~~-~~~-~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 286 (326)
T 2x7f_A 229 EGAPPLCDMHP---------MRALFLIPRNPA-PRL-KSKKWSKKFQSFIESCLVKNHSQRPATEQLMK 286 (326)
T ss_dssp HSSCTTTTSCH---------HHHHHHHHHSCC-CCC-SCSCSCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred hCCCCCCCCcH---------HHHHHHhhcCcc-ccC-CccccCHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 99999854311 011111111100 111 01113467889999999999999999999987
No 216
>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*
Probab=100.00 E-value=2.6e-39 Score=355.01 Aligned_cols=249 Identities=14% Similarity=0.009 Sum_probs=177.0
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCch---hhHHHHHHHHHHHhcc--CCCCcccee-------eEEEcc--
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSV---DRFRDFETQVRVIAKL--VHPNLVRIR-------GFYWGV-- 543 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~---~~~~~~~~E~~~l~~l--~H~nIv~l~-------~~~~~~-- 543 (791)
..+.||+|+||.||+|+. .+|+.||||++..... ...+.+.+|+++++.+ +||||++++ +++...
T Consensus 66 ~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~ 145 (371)
T 3q60_A 66 LVEPLRVGDRSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQ 145 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTS
T ss_pred eeeeccCCCCEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCC
Confidence 457899999999999995 4799999999977432 3345677885544444 699988755 444433
Q ss_pred ---------------CceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHH------HHHHHHHHHHHHHHhcCCCeecCC
Q 003847 544 ---------------DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEAR------LKIAKGVARGLAFLHEKKHVHGNL 602 (791)
Q Consensus 544 ---------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~------~~i~~qi~~gL~yLH~~~ivHrDl 602 (791)
...|+||||++ |+|.+++..... .+++..+ ..++.||+.||+|||++||+||||
T Consensus 146 ~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~----~~~~~~~~~~~vk~~i~~qi~~aL~~LH~~~ivHrDi 220 (371)
T 3q60_A 146 PPFAQLSPGQDDYAVANYLLLMPAAS-VDLELLFSTLDF----VYVFRGDEGILALHILTAQLIRLAANLQSKGLVHGHF 220 (371)
T ss_dssp CSSSBCSCC---CCEEEEEEEECCCS-EEHHHHHHHHHH----SCCCCHHHHHHHHHHHHHHHHHHHHHHHHTTEEETTC
T ss_pred CCeeeccCCcccceeeeEEEEecCCC-CCHHHHHHHhcc----ccchhhhhhhhhHHHHHHHHHHHHHHHHHCCCccCcC
Confidence 23799999998 899999987532 1455555 778899999999999999999999
Q ss_pred CCCCeEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcc
Q 003847 603 KPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPE 682 (791)
Q Consensus 603 kp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE 682 (791)
||+|||++.++.+||+|||+++....... ...||+.|+|||
T Consensus 221 kp~NIll~~~~~~kL~DFG~a~~~~~~~~---------------------------------------~~~~t~~y~aPE 261 (371)
T 3q60_A 221 TPDNLFIMPDGRLMLGDVSALWKVGTRGP---------------------------------------ASSVPVTYAPRE 261 (371)
T ss_dssp SGGGEEECTTSCEEECCGGGEEETTCEEE---------------------------------------GGGSCGGGCCHH
T ss_pred CHHHEEECCCCCEEEEecceeeecCCCcc---------------------------------------CccCCcCCcChh
Confidence 99999999999999999999986542110 122668899999
Q ss_pred cccC--CCCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhcc
Q 003847 683 SLRS--IKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCA 760 (791)
Q Consensus 683 ~~~~--~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl 760 (791)
++.+ ..++.++|||||||++|||++|+.||................ ... ......++.....+..+.+|+.+||
T Consensus 262 ~~~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~li~~~L 337 (371)
T 3q60_A 262 FLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPSL--RVP--GTDSLAFGSCTPLPDFVKTLIGRFL 337 (371)
T ss_dssp HHTCSEEECCHHHHHHHHHHHHHHHHHSSCSTTBCCTTCTTCCCBCCT--TSC--CCCSCCCTTSSCCCHHHHHHHHHHT
T ss_pred hccCCCCCcCccccHHHHHHHHHHHHhCCCCCCCcCcccccchhhhhh--hhc--cccccchhhccCCCHHHHHHHHHHc
Confidence 9987 779999999999999999999999997653321111100000 000 0000011111124567889999999
Q ss_pred CCCCCCCCCHHHHHH
Q 003847 761 SPLPQKRPSMKEALQ 775 (791)
Q Consensus 761 ~~dP~~RPs~~evl~ 775 (791)
+.||++|||+.|+++
T Consensus 338 ~~dP~~Rpt~~e~l~ 352 (371)
T 3q60_A 338 NFDRRRRLLPLEAME 352 (371)
T ss_dssp CSSTTTCCCHHHHTT
T ss_pred CCChhhCCCHHHHhc
Confidence 999999999999975
No 217
>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.5e-38 Score=339.44 Aligned_cols=261 Identities=22% Similarity=0.289 Sum_probs=188.9
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEE--------------ccC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYW--------------GVD 544 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~--------------~~~ 544 (791)
.+.||+|+||.||+|... +++.||||++........+.+.+|++++++++||||+++++++. +.+
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~ 95 (320)
T 2i6l_A 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELN 95 (320)
T ss_dssp EEECC-----CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCS
T ss_pred EEEeccCCCeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccC
Confidence 468999999999999965 58999999998776666788999999999999999999999874 335
Q ss_pred ceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec-CCCCeEEeccCcc
Q 003847 545 EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG-NDMEPKIGDFGLE 623 (791)
Q Consensus 545 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~-~~~~~kL~DFGla 623 (791)
..++||||++ |+|.+++... ++++..++.++.|++.||+|||+.||+||||||+||+++ +++.+||+|||++
T Consensus 96 ~~~lv~e~~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~ 168 (320)
T 2i6l_A 96 SVYIVQEYME-TDLANVLEQG------PLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLA 168 (320)
T ss_dssp EEEEEEECCS-EEHHHHHTTC------CCCHHHHHHHHHHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTC
T ss_pred ceeEEeeccC-CCHHHHhhcC------CccHHHHHHHHHHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccc
Confidence 7799999997 6999988542 389999999999999999999999999999999999997 5678999999999
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVIL 702 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil 702 (791)
+......... .......||..|+|||++.+ ..++.++||||||+++
T Consensus 169 ~~~~~~~~~~---------------------------------~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il 215 (320)
T 2i6l_A 169 RIMDPHYSHK---------------------------------GHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIF 215 (320)
T ss_dssp BCC-----------------------------------------CCCGGGSCCTTCCHHHHHCTTCCCHHHHHHHHHHHH
T ss_pred cccCCCcccc---------------------------------cccccccccccccCcHHhcCcccCCchhhhHhHHHHH
Confidence 8764321110 01122347889999998865 6789999999999999
Q ss_pred HHHHhCCcchhccccCCCCcchh------chhHHHHHH-------HHhhhcCccc----hHHHHHHHHHHHhhccCCCCC
Q 003847 703 LELLTGKVIVVDELGQGNGLLVE------DKNRAIRLA-------DAAIRADFEG----KEEALLSCFKLGYSCASPLPQ 765 (791)
Q Consensus 703 ~elltG~~pf~~~~~~~~~~~~~------~~~~~~~~~-------~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~ 765 (791)
|||++|+.||...........+. ......++. .......... ....+..+.+++.+||+.||+
T Consensus 216 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~ 295 (320)
T 2i6l_A 216 AEMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPM 295 (320)
T ss_dssp HHHHHSSCSSCCSSHHHHHHHHHHHSCCCCHHHHHHHHTTSCHHHHHHTTSCCCCHHHHSTTCCHHHHHHHHTTSCSSGG
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHhcCCCchhhhhhhhhcCcccccccccCCCCChhHhcchhhHHHHHHHHHHcCCCcc
Confidence 99999999996542110000000 000000000 0000000000 011346788999999999999
Q ss_pred CCCCHHHHHHH--hccC
Q 003847 766 KRPSMKEALQA--LEKI 780 (791)
Q Consensus 766 ~RPs~~evl~~--L~~i 780 (791)
+|||++|+++. ++.+
T Consensus 296 ~Rpt~~ell~hp~~~~~ 312 (320)
T 2i6l_A 296 DRLTAEEALSHPYMSIY 312 (320)
T ss_dssp GSCCHHHHHTSHHHHTT
T ss_pred ccCCHHHHhCCcccccc
Confidence 99999999873 4443
No 218
>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A
Probab=100.00 E-value=3.2e-38 Score=346.52 Aligned_cols=249 Identities=16% Similarity=0.229 Sum_probs=193.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-----------CCCccceeeEEEccC---
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-----------HPNLVRIRGFYWGVD--- 544 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-----------H~nIv~l~~~~~~~~--- 544 (791)
.+.||+|+||.||+|+. .+++.||||++.... ...+.+.+|++++++++ |+||+++++++...+
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 102 (373)
T 1q8y_A 24 VRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDK-VYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNG 102 (373)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEEETTE
T ss_pred EEeeeecCCeEEEEEEecCCCcEEEEEEecCCc-cchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhccCCCC
Confidence 46899999999999995 578999999997643 23467889999999886 899999999998654
Q ss_pred -ceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCeecCCCCCCeEec------CCCCeE
Q 003847 545 -EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-KHVHGNLKPRNVLLG------NDMEPK 616 (791)
Q Consensus 545 -~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~ivHrDlkp~NILl~------~~~~~k 616 (791)
..++||||+ +++|.+++...... .+++..+..|+.||+.||+|||++ ||+||||||+|||++ ..+.+|
T Consensus 103 ~~~~lv~e~~-~~~L~~~~~~~~~~---~~~~~~~~~i~~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~k 178 (373)
T 1q8y_A 103 VHVVMVFEVL-GENLLALIKKYEHR---GIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIK 178 (373)
T ss_dssp EEEEEEECCC-CEEHHHHHHHTTTS---CCCHHHHHHHHHHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEE
T ss_pred ceEEEEEecC-CCCHHHHHHHhhcc---CCcHHHHHHHHHHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEE
Confidence 689999999 89999998875432 389999999999999999999998 999999999999994 445799
Q ss_pred EeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhH
Q 003847 617 IGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVY 696 (791)
Q Consensus 617 L~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvw 696 (791)
|+|||+++..... .....||+.|+|||++.+..++.++|||
T Consensus 179 l~Dfg~a~~~~~~---------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~ 219 (373)
T 1q8y_A 179 IADLGNACWYDEH---------------------------------------YTNSIQTREYRSPEVLLGAPWGCGADIW 219 (373)
T ss_dssp ECCCTTCEETTBC---------------------------------------CCSCCSCGGGCCHHHHHTCCCCTHHHHH
T ss_pred EcccccccccCCC---------------------------------------CCCCCCCccccCcHHHhCCCCCchHhHH
Confidence 9999999865421 1123489999999999999999999999
Q ss_pred HHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHH--------------------------------------Hhh
Q 003847 697 SFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLAD--------------------------------------AAI 738 (791)
Q Consensus 697 SlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~ 738 (791)
||||++|||++|+.||............ .....+.+ ...
T Consensus 220 slG~il~el~~g~~pf~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (373)
T 1q8y_A 220 STACLIFELITGDFLFEPDEGHSYTKDD---DHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLEDVL 296 (373)
T ss_dssp HHHHHHHHHHHSSCCC---------CHH---HHHHHHHHHHCSCCHHHHHHCTTHHHHBCC--CBSSCCCCCBCCHHHHH
T ss_pred HHHHHHHHHHhCCCCCCCCcccccCChH---HHHHHHHHhcCCCCHHHHhccchhhhhcCCcchhcccccccccchhhhh
Confidence 9999999999999999754322111110 01111110 011
Q ss_pred hcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 739 RADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 739 ~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
.............+.+|+.+||+.||++|||++|+++
T Consensus 297 ~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 333 (373)
T 1q8y_A 297 TEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVN 333 (373)
T ss_dssp HHTTCCCHHHHHHHHHHHGGGGCSSTTTCBCHHHHHT
T ss_pred hhcccCCcchHHHHHHHHHHHhccCccccCCHHHHhh
Confidence 1122233456788999999999999999999999997
No 219
>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*
Probab=100.00 E-value=9.8e-39 Score=343.38 Aligned_cols=245 Identities=25% Similarity=0.308 Sum_probs=188.8
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCch--------hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSV--------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv 549 (791)
..+.||+|+||.||+|+. .+++.||||++..... .....+.+|++++++++||||+++++++...+ .++|
T Consensus 14 ~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~-~~lv 92 (322)
T 2ycf_A 14 MSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFFDAED-YYIV 92 (322)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECC---------------CHHHHHHHHHHCCCTTBCCEEEEEESSS-EEEE
T ss_pred EeeEEecCCCEEEEEEEEcCCCcEEEEEEeehhhhhhcccccchhhhhHHHHHHHHHhCCCCCCceEeeEEcCCc-eEEE
Confidence 356899999999999995 4689999999865321 22345889999999999999999999987654 8999
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC---eEEeccCccccc
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFGLERLV 626 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~---~kL~DFGla~~~ 626 (791)
|||+++++|.+++.... .+++..++.++.||+.||+|||+.||+||||||+||+++.++. +||+|||+++..
T Consensus 93 ~e~~~~~~L~~~~~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~ 167 (322)
T 2ycf_A 93 LELMEGGELFDKVVGNK-----RLKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL 167 (322)
T ss_dssp EECCTTEETHHHHSTTC-----CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEEC
T ss_pred EecCCCCcHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceec
Confidence 99999999999886543 3899999999999999999999999999999999999987654 999999999876
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILL 703 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~ 703 (791)
..... .....||+.|+|||++. ...++.++|||||||++|
T Consensus 168 ~~~~~-------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~Di~slG~il~ 210 (322)
T 2ycf_A 168 GETSL-------------------------------------MRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILF 210 (322)
T ss_dssp CCCHH-------------------------------------HHHHHSCCTTCCHHHHHHTTTTTCTTHHHHHHHHHHHH
T ss_pred ccccc-------------------------------------cccccCCcCccCchhhccCCCCCCCchhhHHHHHHHHH
Confidence 42210 01124889999999974 567899999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADF-EGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||++|+.||........ ............. ......+..+.+++.+||+.||++||++.|+++
T Consensus 211 ~l~~g~~pf~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~~~l~ 274 (322)
T 2ycf_A 211 ICLSGYPPFSEHRTQVS---------LKDQITSGKYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALR 274 (322)
T ss_dssp HHHHSSCSSCSTTCSSC---------HHHHHHHTCCCCCHHHHTTSCHHHHHHHHHHSCSSTTTSCCHHHHHT
T ss_pred HHHhCCCCCcccchHHH---------HHHHHHhCccccCchhhhhcCHHHHHHHHHHcccCHhhCCCHHHHhh
Confidence 99999999965322111 0111110000000 001123467889999999999999999999985
No 220
>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=3.7e-38 Score=347.34 Aligned_cols=245 Identities=20% Similarity=0.300 Sum_probs=187.0
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEcc--------------
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV-------------- 543 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-------------- 543 (791)
..+.||+|+||.||+|+. .+|+.||||++..... ...+|+++++.++||||+++++++...
T Consensus 11 ~~~~lG~G~fg~V~~a~~~~~~~~vAiK~~~~~~~----~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~ 86 (383)
T 3eb0_A 11 LGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPR----YKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDH 86 (383)
T ss_dssp EEEEEECC-CEEEEEEEETTTCCEEEEEEEECCTT----SCCHHHHHHTTCCCTTBCCEEEEEEEC--------------
T ss_pred EEEEEEeccCEEEEEEEECCCCCEEEEEEEecCcc----hHHHHHHHHHHcCCCCccchhheeeecCccccccccccccc
Confidence 356899999999999984 6799999999865432 234799999999999999999998543
Q ss_pred ------------------------CceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCee
Q 003847 544 ------------------------DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVH 599 (791)
Q Consensus 544 ------------------------~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivH 599 (791)
...++||||++ |+|.+.+....... ..+++..++.++.||+.||+|||+.||+|
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~-~~l~~~~~~~i~~qi~~aL~~LH~~gi~H 164 (383)
T 3eb0_A 87 NKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHKVLKSFIRSG-RSIPMNLISIYIYQLFRAVGFIHSLGICH 164 (383)
T ss_dssp -----------------------CCEEEEEECCCS-EEHHHHHHHHHHTT-CCCCHHHHHHHHHHHHHHHHHHHTTTEEC
T ss_pred ccccccccccccccccccccCCCceEEEEEEecCC-ccHHHHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHHHCcCcc
Confidence 23789999997 58888776532111 24999999999999999999999999999
Q ss_pred cCCCCCCeEec-CCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcc
Q 003847 600 GNLKPRNVLLG-NDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPY 678 (791)
Q Consensus 600 rDlkp~NILl~-~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y 678 (791)
|||||+|||++ .++.+||+|||+++....... .....||+.|
T Consensus 165 ~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~-------------------------------------~~~~~~t~~y 207 (383)
T 3eb0_A 165 RDIKPQNLLVNSKDNTLKLCDFGSAKKLIPSEP-------------------------------------SVAYICSRFY 207 (383)
T ss_dssp SCCCGGGEEEETTTTEEEECCCTTCEECCTTSC-------------------------------------CCCCCCCSSC
T ss_pred CccCHHHEEEcCCCCcEEEEECCCCcccCCCCC-------------------------------------CcCcccCCCc
Confidence 99999999998 688999999999987643211 1233589999
Q ss_pred cCcccccCC-CCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhh----------hcC-----c
Q 003847 679 HAPESLRSI-KPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAI----------RAD-----F 742 (791)
Q Consensus 679 ~APE~~~~~-~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~-----~ 742 (791)
+|||++.+. .++.++||||+||++|||++|+.||.+.... .....+..... ... +
T Consensus 208 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~---------~~~~~i~~~~g~p~~~~~~~~~~~~~~~~~ 278 (383)
T 3eb0_A 208 RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSI---------DQLVRIIQIMGTPTKEQMIRMNPHYTEVRF 278 (383)
T ss_dssp CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHH---------HHHHHHHHHHCCCCHHHHHHHCTTC--CCC
T ss_pred cCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChH---------HHHHHHHHHhCCCCHHHHHHhCcccccccC
Confidence 999998764 4899999999999999999999999654211 00111110000 000 0
Q ss_pred -----c-----chHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 743 -----E-----GKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 743 -----~-----~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
. .....+..+.+|+.+||+.||++|||+.|+++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~e~l~ 321 (383)
T 3eb0_A 279 PTLKAKDWRKILPEGTPSLAIDLLEQILRYEPDLRINPYEAMA 321 (383)
T ss_dssp CCCCCCCHHHHSCTTCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred CccCcccHHhhCCCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 00113456889999999999999999999985
No 221
>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*
Probab=100.00 E-value=3.9e-38 Score=332.87 Aligned_cols=244 Identities=24% Similarity=0.300 Sum_probs=195.8
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...||+|+||.||+|+.. +++.||||++... .....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 106 (287)
T 2wei_A 27 VCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGG 106 (287)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEEECSSEEEEEECCCCSC
T ss_pred eEEEcCCCCEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEEeCCCeEEEEEEccCCC
Confidence 468999999999999964 7899999998653 2234578899999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC---CCeEEeccCcccccCCCCCCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND---MEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~---~~~kL~DFGla~~~~~~~~~~ 633 (791)
+|.+++.... .+++..++.++.||+.||+|||+.||+||||||+||+++.+ +.+||+|||++........
T Consensus 107 ~L~~~l~~~~-----~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~-- 179 (287)
T 2wei_A 107 ELFDEIIKRK-----RFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTK-- 179 (287)
T ss_dssp BHHHHHHHHS-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSS--
T ss_pred CHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCc--
Confidence 9999887654 38999999999999999999999999999999999999754 4699999999886543211
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchh
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVV 713 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~ 713 (791)
.....||+.|+|||++.+ .++.++||||||+++|+|++|+.||.
T Consensus 180 -----------------------------------~~~~~~~~~y~aPE~~~~-~~~~~~Di~slG~~l~~l~~g~~p~~ 223 (287)
T 2wei_A 180 -----------------------------------MKDRIGTAYYIAPEVLRG-TYDEKCDVWSAGVILYILLSGTPPFY 223 (287)
T ss_dssp -----------------------------------CSCHHHHHTTCCHHHHTT-CCCTHHHHHHHHHHHHHHHHSSCSSC
T ss_pred -----------------------------------cccccCcccccChHHhcC-CCCCchhhHhHHHHHHHHHhCCCCCC
Confidence 112237888999999876 48999999999999999999999986
Q ss_pred ccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 714 DELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
..... .....+.........+.....+..+.+++.+||+.||++|||+.|+++
T Consensus 224 ~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 276 (287)
T 2wei_A 224 GKNEY---------DILKRVETGKYAFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLE 276 (287)
T ss_dssp CSSHH---------HHHHHHHHCCCCCCSGGGTTSCHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred CCCHH---------HHHHHHHcCCCCCCchhhhhcCHHHHHHHHHHcccChhhCcCHHHHhc
Confidence 53110 111111111111111111224567889999999999999999999997
No 222
>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*
Probab=100.00 E-value=1.1e-38 Score=346.69 Aligned_cols=243 Identities=19% Similarity=0.305 Sum_probs=195.6
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCchhh-----------------HHHHHHHHHHHhccCCCCccceeeEEE
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDR-----------------FRDFETQVRVIAKLVHPNLVRIRGFYW 541 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~-----------------~~~~~~E~~~l~~l~H~nIv~l~~~~~ 541 (791)
..+.||+|+||.||+|.. +|+.||||++....... .+.+.+|++++++++||||+++++++.
T Consensus 35 ~~~~lg~G~~g~V~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~ 113 (348)
T 2pml_X 35 IIRTLNQGKFNKIILCEK-DNKFYALKKYEKSLLEKKRDFTKSNNDKISIKSKYDDFKNELQIITDIKNEYCLTCEGIIT 113 (348)
T ss_dssp EEEEEECCSSCCEEEEEE-TTEEEEEEEEEHHHHSSCEEECCCSSSSCCEEEHHHHHHHHHHHHTTCCCTTBCCCSEEEE
T ss_pred EEEEEcCCCCeEEEEEEc-CCceEEEEEeecccccchhhhccccchhhhHHhHHHHHHHHHHHHHhCCCCCcceEEEEEe
Confidence 346899999999999999 89999999986532211 178999999999999999999999999
Q ss_pred ccCceEEEEeccCCCChhHH------HHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCC
Q 003847 542 GVDEKLIIYDFVPNGSLANA------RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDME 614 (791)
Q Consensus 542 ~~~~~~lv~e~~~~gsL~~~------l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~ 614 (791)
+.+..++||||+++++|.++ +.... ...+++..++.++.|++.||+|||+ .||+||||||+||+++.++.
T Consensus 114 ~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~---~~~~~~~~~~~i~~qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~ 190 (348)
T 2pml_X 114 NYDEVYIIYEYMENDSILKFDEYFFVLDKNY---TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGR 190 (348)
T ss_dssp SSSEEEEEEECCTTCBSSEESSSEESSCSSS---CCCCCHHHHHHHHHHHHHHHHHHHHTSCEECCCCCGGGEEECTTSC
T ss_pred eCCeEEEEEeccCCCcHHHHHHHhhhhhhcc---ccCCCHHHHHHHHHHHHHHHHHHhccCCEeecCCChHhEEEcCCCc
Confidence 99999999999999999998 44321 1259999999999999999999999 99999999999999999999
Q ss_pred eEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCC-c
Q 003847 615 PKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNP-K 692 (791)
Q Consensus 615 ~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~-~ 692 (791)
+||+|||++....... .....||+.|+|||++.+. .++. +
T Consensus 191 ~kl~dfg~~~~~~~~~--------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~ 232 (348)
T 2pml_X 191 VKLSDFGESEYMVDKK--------------------------------------IKGSRGTYEFMPPEFFSNESSYNGAK 232 (348)
T ss_dssp EEECCCTTCEECBTTE--------------------------------------ECSSCSCGGGCCGGGGSSCCCEEHHH
T ss_pred EEEecccccccccccc--------------------------------------ccCCCCCcCccCchhhcCCCCCCcch
Confidence 9999999998754321 1123489999999999876 5666 9
Q ss_pred hhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccch-------------------HHHHHHHH
Q 003847 693 WDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK-------------------EEALLSCF 753 (791)
Q Consensus 693 sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~~~~l~ 753 (791)
+||||||+++|||++|+.||...... .+............+ ......+.
T Consensus 233 ~Di~slG~il~~l~~g~~pf~~~~~~------------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 300 (348)
T 2pml_X 233 VDIWSLGICLYVMFYNVVPFSLKISL------------VELFNNIRTKNIEYPLDRNHFLYPLTNKKSTCSNNFLSNEDI 300 (348)
T ss_dssp HHHHHHHHHHHHHHHSSCSSCCSSCS------------HHHHHHHTSCCCCCCCSSSSSTTTTCC--------CCCHHHH
T ss_pred hhHHHHHHHHHHHHhCCCCCCCCCcH------------HHHHHHHhccCcCCccchhhhhccccccccccchhhcCHHHH
Confidence 99999999999999999999653220 000111111100000 22456788
Q ss_pred HHHhhccCCCCCCCCCHHHHHH
Q 003847 754 KLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 754 ~li~~cl~~dP~~RPs~~evl~ 775 (791)
+++.+||+.||++|||+.|+++
T Consensus 301 ~li~~~L~~dP~~Rps~~e~l~ 322 (348)
T 2pml_X 301 DFLKLFLRKNPAERITSEDALK 322 (348)
T ss_dssp HHHHHHCCSSGGGSCCHHHHHT
T ss_pred HHHHHHccCChhhCCCHHHHhc
Confidence 9999999999999999999987
No 223
>3an0_A Dual specificity mitogen-activated protein kinase; auto inhibition state, activation helix, serine/threonine-PR kinase; HET: ANK; 2.60A {Homo sapiens} PDB: 3vn9_A*
Probab=100.00 E-value=1.3e-38 Score=345.09 Aligned_cols=248 Identities=20% Similarity=0.292 Sum_probs=191.9
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHH-HhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRV-IAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~-l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
....||+|+||.||+|+. .+|+.||||++.... .....++..|+.+ ++.++||||+++++++...+..++||||+++
T Consensus 55 ~~~~lG~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 134 (340)
T 3an0_A 55 PIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFREGDVWICMELMDT 134 (340)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSCCCCHHHHHHHHHHHHHHTTCCCTTTCCEEEEEECSSCEEEEECCCSE
T ss_pred EeeEecccCCEEEEEEEEcCCCCEEEEEEeccccCcHHHHHHHHHHHHHHhhcCCCcEEEEeeEEEeCCcEEEEHHHhhC
Confidence 346899999999999995 579999999997642 2334555666665 7788999999999999999999999999975
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|.+++...... ...+++..++.|+.||+.||+|||+. ||+||||||+|||++.++.+||+|||+++........
T Consensus 135 -~L~~~l~~~~~~-~~~l~~~~~~~i~~qi~~~l~~lH~~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~-- 210 (340)
T 3an0_A 135 -SLDKFYKQVIDK-GQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK-- 210 (340)
T ss_dssp -EHHHHHHHHHHT-SCCCCHHHHHHHHHHHHHHHHHHHHHTCCCCCSCCSTTEEECSTTCEEECCCSHHHHHSCHHHH--
T ss_pred -cHHHHHHHHHhc-CCCCCHHHHHHHHHHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeeCCCceeccccccc--
Confidence 999888753211 12499999999999999999999986 9999999999999999999999999999876421100
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc----CCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR----SIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~----~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
....||+.|+|||++. ...++.++|||||||++|||++|+.
T Consensus 211 -----------------------------------~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~tg~~ 255 (340)
T 3an0_A 211 -----------------------------------TIDAGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRF 255 (340)
T ss_dssp -----------------------------------HHSSCCCCCCCHHHHSCCTTCCSCCHHHHHHHHHHHHHHHHHTSC
T ss_pred -----------------------------------ccCCCCccccCccccccccccCCCCchhhHHHHHHHHHHHHHCCC
Confidence 0124899999999964 3478999999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||..... ............. .... .......+.+++.+||+.||++||++.|+++
T Consensus 256 p~~~~~~--------~~~~~~~~~~~~~-~~~~-~~~~~~~~~~li~~~l~~dp~~Rps~~ell~ 310 (340)
T 3an0_A 256 PYDSWGT--------PFQQLKQVVEEPS-PQLP-ADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310 (340)
T ss_dssp SSCCCSC--------HHHHHHHHHHSCC-CCCC-GGGSCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCccccc--------hHHHHHHHhcCCC-CCCC-cccCCHHHHHHHHHHccCCcccCcCHHHHhc
Confidence 9964211 0111111111111 1111 1124567899999999999999999999986
No 224
>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A
Probab=100.00 E-value=5.4e-38 Score=344.39 Aligned_cols=251 Identities=20% Similarity=0.238 Sum_probs=189.3
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCce------EEE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEK------LII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~------~lv 549 (791)
....||+|+||.||+|.. .+|+.||||++... .....+.+.+|+.++++++||||+++++++...+.. ++|
T Consensus 46 ~~~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~lv 125 (371)
T 4exu_A 46 SPTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLV 125 (371)
T ss_dssp EEEEEEECSSEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSSTTCCCCEEE
T ss_pred EEeEEecCCCeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccCCcccceeEEEE
Confidence 356899999999999994 56899999999764 333457788999999999999999999999877655 999
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
|||+. ++|.+++.. .+++..+..++.||+.||+|||+.||+||||||+|||++.++.+||+|||+++.....
T Consensus 126 ~e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~ 197 (371)
T 4exu_A 126 MPFMQ-TDLQKIMGM-------EFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE 197 (371)
T ss_dssp EECCC-EEHHHHTTS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC------
T ss_pred Ecccc-ccHHHHhhc-------CCCHHHHHHHHHHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccC
Confidence 99996 688776532 3899999999999999999999999999999999999999999999999999754321
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG 708 (791)
.....||+.|+|||++.+ ..++.++|||||||++|||++|
T Consensus 198 ---------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g 238 (371)
T 4exu_A 198 ---------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTG 238 (371)
T ss_dssp -----------------------------------------CTTCCCTTSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHS
T ss_pred ---------------------------------------cCCcccCccccCHHHhcCCCCCCcHHhHHHHHHHHHHHHhC
Confidence 112358999999999987 7889999999999999999999
Q ss_pred CcchhccccCCCCcchh--------------chhHHHHHHHHhhhcCccc----hHHHHHHHHHHHhhccCCCCCCCCCH
Q 003847 709 KVIVVDELGQGNGLLVE--------------DKNRAIRLADAAIRADFEG----KEEALLSCFKLGYSCASPLPQKRPSM 770 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~ 770 (791)
+.||...........+. ................... .......+.+|+.+||+.||++|||+
T Consensus 239 ~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~ 318 (371)
T 4exu_A 239 KTLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTA 318 (371)
T ss_dssp SCSCCCSSHHHHHHHHHHHHCCCCHHHHTTCSCHHHHHHHHHSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSCTTTSCCH
T ss_pred CCCCCCCChHHHHHHHHHHhCCCcHHHHHHhhhhhhhhhhhccCCCcchhHHHhccccChHHHHHHHHHCCCChhhcCCH
Confidence 99996532100000000 0000000000000000000 01124678999999999999999999
Q ss_pred HHHHHH
Q 003847 771 KEALQA 776 (791)
Q Consensus 771 ~evl~~ 776 (791)
.|+++.
T Consensus 319 ~ell~h 324 (371)
T 4exu_A 319 AQALTH 324 (371)
T ss_dssp HHHHTS
T ss_pred HHHhcC
Confidence 999875
No 225
>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*
Probab=100.00 E-value=3.7e-38 Score=369.25 Aligned_cols=253 Identities=22% Similarity=0.274 Sum_probs=200.5
Q ss_pred hhcceeccccCceEEEEEEeC----CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 477 KASAYILGASGSSIMYKAVLE----DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~----~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
+...+.||+|+||.||+|... .+..||||++... .....+.+.+|+.++++++||||+++++++. .+..++|||
T Consensus 392 y~i~~~LG~G~fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~~-~~~~~lv~E 470 (656)
T 2j0j_A 392 IELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVIT-ENPVWIIME 470 (656)
T ss_dssp EEEEEEEECCSSCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-SSSCEEEEE
T ss_pred EEEeeEEeeCCCEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-cCceEEEEE
Confidence 445678999999999999853 2568999998764 3344578999999999999999999999984 567899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++|+|.+++..... .+++..++.++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++.......
T Consensus 471 ~~~~g~L~~~l~~~~~----~l~~~~~~~i~~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~ 546 (656)
T 2j0j_A 471 LCTLGELRSFLQVRKF----SLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTY 546 (656)
T ss_dssp CCTTCBHHHHHHHTTT----TCCHHHHHHHHHHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---
T ss_pred cCCCCcHHHHHHhccC----CCCHHHHHHHHHHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcc
Confidence 9999999999876532 389999999999999999999999999999999999999999999999999987643211
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh-CCc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT-GKV 710 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt-G~~ 710 (791)
. ......||+.|+|||++.+..++.++|||||||++|||++ |..
T Consensus 547 ~-----------------------------------~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ellt~g~~ 591 (656)
T 2j0j_A 547 Y-----------------------------------KASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVK 591 (656)
T ss_dssp ------------------------------------------CCGGGCCHHHHHHCCCCHHHHHHHHHHHHHHHHTTSCC
T ss_pred e-----------------------------------eccCCCCCcceeCHHHhcCCCCCchhhHHHHHHHHHHHHHcCCC
Confidence 0 0112336788999999998899999999999999999997 888
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCC
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIP 781 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~ 781 (791)
||.+.... .....+.. ... .+.+...+..+.+++.+||+.||++|||+.|+++.|+++.
T Consensus 592 Pf~~~~~~---------~~~~~i~~-~~~--~~~~~~~~~~l~~li~~~l~~dP~~RPs~~el~~~L~~il 650 (656)
T 2j0j_A 592 PFQGVKNN---------DVIGRIEN-GER--LPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTIL 650 (656)
T ss_dssp TTTTCCHH---------HHHHHHHH-TCC--CCCCTTCCHHHHHHHHHHTCSSGGGSCCHHHHHHHHHHHH
T ss_pred CCCCCCHH---------HHHHHHHc-CCC--CCCCccccHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHH
Confidence 98653111 11111111 111 1122234567889999999999999999999999998763
No 226
>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*
Probab=100.00 E-value=3.9e-38 Score=344.54 Aligned_cols=255 Identities=19% Similarity=0.211 Sum_probs=186.2
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCch-----------hhHHHHHHHHHHHhccCCCCccceeeEEEcc-----
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSV-----------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGV----- 543 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~-----------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~----- 543 (791)
.+.||+|+||.||+|...+|+.||||++..... ...+.+.+|++++++++||||+++++++...
T Consensus 27 ~~~lg~G~~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 106 (362)
T 3pg1_A 27 QRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAM 106 (362)
T ss_dssp EEEEEEETTEEEEEEECTTSCEEEEEEECEECCTTSCEEGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEEEECCTTTC
T ss_pred eEEeccCCCEEEEEEECCCCCeEEEEeccccCCccchhhhhhhhhHHHHHHHHHHHHHhCCCcCccceeeeEEeccCCCc
Confidence 468999999999999988899999999864321 1237899999999999999999999998543
Q ss_pred CceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcc
Q 003847 544 DEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLE 623 (791)
Q Consensus 544 ~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla 623 (791)
...++||||++ |+|.+++..... .+++..+..|+.||+.||+|||+.||+||||||+||+++.++.+||+|||++
T Consensus 107 ~~~~lv~e~~~-~~l~~~~~~~~~----~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~ 181 (362)
T 3pg1_A 107 HKLYLVTELMR-TDLAQVIHDQRI----VISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLA 181 (362)
T ss_dssp CEEEEEEECCS-EEHHHHHHCTTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCTTC-
T ss_pred ceEEEEEccCC-CCHHHHHHhccc----CCCHHHHHHHHHHHHHHHHHHHHCcCEecCCChHHEEEcCCCCEEEEecCcc
Confidence 35799999997 688888775432 4899999999999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVIL 702 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil 702 (791)
+....... .....||+.|+|||++.+ ..++.++|||||||++
T Consensus 182 ~~~~~~~~-------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il 224 (362)
T 3pg1_A 182 REDTADAN-------------------------------------KTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVM 224 (362)
T ss_dssp ---------------------------------------------------CGGGCCHHHHTTCTTCCTHHHHHHHHHHH
T ss_pred cccccccc-------------------------------------cceecccceecCcHHhcCCCCCCcHhHHHhHHHHH
Confidence 75432111 123458999999999876 6789999999999999
Q ss_pred HHHHhCCcchhccccCCCCcchhc--------------hhHHHHHHHHhhhcCcc-----chHHHHHHHHHHHhhccCCC
Q 003847 703 LELLTGKVIVVDELGQGNGLLVED--------------KNRAIRLADAAIRADFE-----GKEEALLSCFKLGYSCASPL 763 (791)
Q Consensus 703 ~elltG~~pf~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~-----~~~~~~~~l~~li~~cl~~d 763 (791)
|||++|+.||...........+.. ................. ........+.+|+.+||+.|
T Consensus 225 ~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 304 (362)
T 3pg1_A 225 AEMFNRKALFRGSTFYNQLNKIVEVVGTPKIEDVVMFSSPSARDYLRNSLSNVPARAWTAVVPTADPVALDLIAKMLEFN 304 (362)
T ss_dssp HHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHTSCHHHHHHTTTCCCCCCCCCHHHHSTTSCHHHHHHHHHHTCSS
T ss_pred HHHHhCCCCCCCCCHHHHHHHHHHHcCCCChHHhhhccchhhhHHHHhhcccCChhhHHhhCCCCCHHHHHHHHHHhcCC
Confidence 999999999965321100000000 00000000000000000 00112356889999999999
Q ss_pred CCCCCCHHHHHHH
Q 003847 764 PQKRPSMKEALQA 776 (791)
Q Consensus 764 P~~RPs~~evl~~ 776 (791)
|++|||+.|+++.
T Consensus 305 P~~Rpt~~ell~h 317 (362)
T 3pg1_A 305 PQRRISTEQALRH 317 (362)
T ss_dssp GGGSCCHHHHHTS
T ss_pred hhhCCCHHHHHcC
Confidence 9999999999874
No 227
>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*
Probab=100.00 E-value=7.2e-38 Score=338.63 Aligned_cols=253 Identities=21% Similarity=0.264 Sum_probs=195.0
Q ss_pred ceeccccCceEEEEEEe--CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCC------CccceeeEEEccCceEEEEe
Q 003847 480 AYILGASGSSIMYKAVL--EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHP------NLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~--~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~------nIv~l~~~~~~~~~~~lv~e 551 (791)
.+.||+|+||.||+|.. .+++.||||+++... ...+.+.+|+++++.++|+ +|+++++++...+..++|||
T Consensus 19 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~~~~~~~~lv~e 97 (339)
T 1z57_A 19 VDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVD-RYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHICIVFE 97 (339)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEEEETTEEEEEEE
T ss_pred EEEEecCCCeEEEEEEecCCCCcEEEEEEEecCC-chhHHHHHHHHHHHHhhhcCCCCceeeEeeecccccCCcEEEEEc
Confidence 46899999999999985 368999999997643 3356788999999988665 49999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-------------------C
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-------------------D 612 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-------------------~ 612 (791)
|+ +++|.+++...... ++++..+..++.||+.||+|||+.||+||||||+|||++. +
T Consensus 98 ~~-~~~l~~~l~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~ 173 (339)
T 1z57_A 98 LL-GLSTYDFIKENGFL---PFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLIN 173 (339)
T ss_dssp CC-CCBHHHHHHHTTTC---CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESC
T ss_pred CC-CCCHHHHHHhcCCC---CCcHHHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccC
Confidence 99 89999998765432 4899999999999999999999999999999999999987 6
Q ss_pred CCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCc
Q 003847 613 MEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPK 692 (791)
Q Consensus 613 ~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~ 692 (791)
+.+||+|||+++..... .....||+.|+|||++.+..++.+
T Consensus 174 ~~~kl~Dfg~~~~~~~~---------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~ 214 (339)
T 1z57_A 174 PDIKVVDFGSATYDDEH---------------------------------------HSTLVSTRHYRAPEVILALGWSQP 214 (339)
T ss_dssp CCEEECCCSSCEETTSC---------------------------------------CCSSCSCGGGCCHHHHTTSCCCTH
T ss_pred CCceEeeCcccccCccc---------------------------------------cccccCCccccChHHhhCCCCCcc
Confidence 68999999998764321 112358999999999999999999
Q ss_pred hhhHHHHHHHHHHHhCCcchhccccCCCCcchhc----------------------------hhHHHHHHHHh---hhcC
Q 003847 693 WDVYSFGVILLELLTGKVIVVDELGQGNGLLVED----------------------------KNRAIRLADAA---IRAD 741 (791)
Q Consensus 693 sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~---~~~~ 741 (791)
+|||||||++|||++|+.||...........+.. ........... ....
T Consensus 215 ~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (339)
T 1z57_A 215 CDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSRACKPLKEF 294 (339)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGG
T ss_pred hhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHhhccchhHHhhccccccccccccchhhhcCcchhhh
Confidence 9999999999999999999864321100000000 00000000000 0000
Q ss_pred ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 742 FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 742 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
..........+.+|+.+||+.||++|||+.|+++.
T Consensus 295 ~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~ell~h 329 (339)
T 1z57_A 295 MLSQDVEHERLFDLIQKMLEYDPAKRITLREALKH 329 (339)
T ss_dssp CSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTTS
T ss_pred cccchhhHHHHHHHHHHHhCcCcccccCHHHHhcC
Confidence 11122356788999999999999999999999853
No 228
>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*
Probab=100.00 E-value=3.8e-39 Score=343.16 Aligned_cols=257 Identities=21% Similarity=0.311 Sum_probs=180.4
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
..+.||+|+||.||+|.. .+++.||||++.... ....+++.+|++++++++||||+++++++...+..++||||++++
T Consensus 19 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~ 98 (303)
T 2vwi_A 19 LQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGG 98 (303)
T ss_dssp EEEECC---CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEEESSSCEEEEEECCTTC
T ss_pred hhheeccccceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEEeecCCcEEEehhccCC
Confidence 356899999999999994 478999999987542 334567889999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCC---CCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 557 SLANARYRKMGS---SPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 557 sL~~~l~~~~~~---~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
+|.+++...... ....+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||++..........
T Consensus 99 ~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~ 178 (303)
T 2vwi_A 99 SVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT 178 (303)
T ss_dssp BHHHHHHHHHHTTTTTTCSSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC------
T ss_pred chHHHHHHHhhccccccCCCCHHHHHHHHHHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCcc
Confidence 999998752111 12248999999999999999999999999999999999999999999999999998764322110
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcch
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVIV 712 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~pf 712 (791)
. ........||+.|+|||++.+ ..++.++||||||+++|||++|+.||
T Consensus 179 ~-------------------------------~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf 227 (303)
T 2vwi_A 179 R-------------------------------NKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPY 227 (303)
T ss_dssp ----------------------------------------CCCTTCCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTT
T ss_pred c-------------------------------hhhhcccCCCccccCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCC
Confidence 0 001123458999999999875 56899999999999999999999999
Q ss_pred hccccCCCCcchhchhHHHHHHHHhhhc------CccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 713 VDELGQGNGLLVEDKNRAIRLADAAIRA------DFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
....... ............ ...........+.+++.+||+.||++||++.|+++
T Consensus 228 ~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 287 (303)
T 2vwi_A 228 HKYPPMK---------VLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLR 287 (303)
T ss_dssp TTSCGGG---------HHHHHHTSSCCCTTC-----CCCCCCCHHHHHHHHHHCCSSGGGSCCHHHHHT
T ss_pred ccCchhh---------HHHHHhccCCCccccccccchhhhhhhHHHHHHHHHHccCChhhCcCHHHHhh
Confidence 6532110 000000000000 00000113356889999999999999999999986
No 229
>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}
Probab=100.00 E-value=5.3e-39 Score=344.86 Aligned_cols=257 Identities=19% Similarity=0.261 Sum_probs=193.6
Q ss_pred cceeccccCceEEEEEEeCCCcEEEEEEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCCC
Q 003847 479 SAYILGASGSSIMYKAVLEDGTALAVRRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
..+.||+|+||.||+|+..+ .||||++.... ....+.+.+|++++++++||||+++++++...+..++||||++++
T Consensus 37 ~~~~lg~G~~g~V~~~~~~~--~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~iv~e~~~~~ 114 (319)
T 2y4i_B 37 IGELIGKGRFGQVYHGRWHG--EVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGR 114 (319)
T ss_dssp CCCBCCCSSSSEEEEEEESS--SEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEEECSSCEEEECBCCCSE
T ss_pred EeeEeccCCceEEEEEEEcC--eEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEEecCCceEEEeecccCC
Confidence 35789999999999998753 59999987532 223456788999999999999999999999999999999999999
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKAG 636 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~ 636 (791)
+|.+++..... .+++..++.++.||+.||+|||+.||+||||||+||+++ ++.+||+|||+++..........
T Consensus 115 ~L~~~l~~~~~----~~~~~~~~~i~~qi~~al~~lH~~~i~H~dlkp~NIl~~-~~~~~l~Dfg~~~~~~~~~~~~~-- 187 (319)
T 2y4i_B 115 TLYSVVRDAKI----VLDVNKTRQIAQEIVKGMGYLHAKGILHKDLKSKNVFYD-NGKVVITDFGLFSISGVLQAGRR-- 187 (319)
T ss_dssp EHHHHTTSSCC----CCCSHHHHHHHHHHHHHHHHHHHTTCCCCCCCSTTEEEC---CCEECCCSCCC------------
T ss_pred cHHHHHHhcCC----CCCHHHHHHHHHHHHHHHHHHHhCCccccCCChhhEEEe-CCCEEEeecCCcccccccccccc--
Confidence 99998865432 489999999999999999999999999999999999998 67999999999876532111100
Q ss_pred CCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC---------CCCCCchhhHHHHHHHHHHHh
Q 003847 637 GSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS---------IKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~---------~~~~~~sDvwSlGvil~ellt 707 (791)
........||+.|+|||++.+ ..++.++||||||+++|||++
T Consensus 188 -----------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~ 238 (319)
T 2y4i_B 188 -----------------------------EDKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHA 238 (319)
T ss_dssp -----------------------------CCSCBCCSGGGGTSCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------------------ccccccCCCcccccChHHhhhccccccccccCCCchhhHHHHHHHHHHHHh
Confidence 011123348999999999874 457889999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCCC
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSSP 784 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~~ 784 (791)
|+.||...... .....+.. ....... ....+..+.+++.+||+.||++|||+.++++.|+++....
T Consensus 239 g~~p~~~~~~~---------~~~~~~~~-~~~~~~~-~~~~~~~l~~li~~~l~~~p~~Rpt~~~l~~~l~~l~~~~ 304 (319)
T 2y4i_B 239 REWPFKTQPAE---------AIIWQMGT-GMKPNLS-QIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRN 304 (319)
T ss_dssp SSCSSSSCCHH---------HHHHHHHT-TCCCCCC-CSSCCTTHHHHHHHHHCSSTTTSCCHHHHHHHHTTC----
T ss_pred CCCCCCCCCHH---------HHHHHhcc-CCCCCCC-cCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHHHHHhh
Confidence 99999653211 01111111 1111111 1113456889999999999999999999999999987554
No 230
>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*
Probab=100.00 E-value=1.9e-38 Score=343.06 Aligned_cols=249 Identities=20% Similarity=0.219 Sum_probs=170.2
Q ss_pred hhcceeccccCceEEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEc----cCceEEEEe
Q 003847 477 KASAYILGASGSSIMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG----VDEKLIIYD 551 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~----~~~~~lv~e 551 (791)
....++||+|+||.||+|+.. +|+.||||++..... ........++.++||||+++++++.. ....++|||
T Consensus 31 ~i~~~~lG~G~~g~V~~~~~~~~~~~vavK~~~~~~~----~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e 106 (336)
T 3fhr_A 31 QLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPK----ARQEVDHHWQASGGPHIVCILDVYENMHHGKRCLLIIME 106 (336)
T ss_dssp EEEEEEEEEETTEEEEEEEETTTCCEEEEEEEESSHH----HHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEEE
T ss_pred EecceeeeeCCCeEEEEEEECCCCCEEEEEEecCcHH----HHHHHHHHHHhcCCCChHHHHHHHhhccCCCceEEEEEe
Confidence 333568999999999999965 799999999965421 12222334566799999999999976 445799999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC---CCCeEEeccCcccccCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTG 628 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---~~~~kL~DFGla~~~~~ 628 (791)
|+++|+|.+++...... .+++.+++.|+.||+.||+|||+.||+||||||+||+++. ++.+||+|||+++....
T Consensus 107 ~~~gg~L~~~l~~~~~~---~l~~~~~~~i~~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~ 183 (336)
T 3fhr_A 107 CMEGGELFSRIQERGDQ---AFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQ 183 (336)
T ss_dssp CCTTEEHHHHHHTC-CC---CCBHHHHHHHHHHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC--
T ss_pred ccCCCCHHHHHHhcCCC---CCCHHHHHHHHHHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccc
Confidence 99999999999865432 4999999999999999999999999999999999999976 45599999999986542
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhC
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG 708 (791)
.. .....||+.|+|||++.+..++.++||||||+++|||++|
T Consensus 184 ~~--------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g 225 (336)
T 3fhr_A 184 NA--------------------------------------LQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG 225 (336)
T ss_dssp ----------------------------------------------------------CHHHHHHHHHHHHHHHHHHHHS
T ss_pred cc--------------------------------------cccCCCCcCccChhhhCCCCCCchhhHHHHHHHHHHHHHC
Confidence 11 1123489999999999888899999999999999999999
Q ss_pred CcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+.||.............. .+.........+........+.+|+.+||+.||++|||+.|+++
T Consensus 226 ~~pf~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ell~ 287 (336)
T 3fhr_A 226 FPPFYSNTGQAISPGMKR-----RIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMN 287 (336)
T ss_dssp SCCC--------------------------CCCTTTSTTCCHHHHHHHHHHSCSSGGGSCCHHHHHH
T ss_pred CCCCCCccchhhhhhHHH-----hhhccccccCchhhccCCHHHHHHHHHHCCCChhHCcCHHHHhc
Confidence 999966433221111000 00000000001111224567889999999999999999999997
No 231
>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*
Probab=100.00 E-value=6.4e-38 Score=335.59 Aligned_cols=246 Identities=22% Similarity=0.294 Sum_probs=192.1
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccC--CCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLV--HPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...||+|+||.||++...+++.||||++... .....+.+.+|++++++++ |+||+++++++...+..++||| +.+
T Consensus 33 ~~~lg~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~~~~~~~~lv~e-~~~ 111 (313)
T 3cek_A 33 LKQIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVME-CGN 111 (313)
T ss_dssp EEEEECCSSEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEEECSSEEEEEEC-CCS
T ss_pred EEEecCCCCEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEeecCCEEEEEEe-cCC
Confidence 4689999999999999888999999998653 3445678999999999997 5999999999999999999999 558
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++.... .+++..++.++.|++.||+|||+.||+||||||+||++++ +.+||+|||+++.........
T Consensus 112 ~~L~~~l~~~~-----~~~~~~~~~i~~qi~~aL~~LH~~~ivH~dlkp~NIl~~~-~~~kL~Dfg~~~~~~~~~~~~-- 183 (313)
T 3cek_A 112 IDLNSWLKKKK-----SIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLIVD-GMLKLIDFGIANQMQPDTTSV-- 183 (313)
T ss_dssp EEHHHHHHHCS-----SCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEEET-TEEEECCCSSSCC----------
T ss_pred CcHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCceecCCCcccEEEEC-CeEEEeeccccccccCccccc--
Confidence 89999988653 3899999999999999999999999999999999999965 799999999998664321110
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-----------CCCCCchhhHHHHHHHHH
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-----------IKPNPKWDVYSFGVILLE 704 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-----------~~~~~~sDvwSlGvil~e 704 (791)
......||+.|+|||++.+ ..++.++||||||+++||
T Consensus 184 --------------------------------~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~e 231 (313)
T 3cek_A 184 --------------------------------VKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYY 231 (313)
T ss_dssp --------------------------------------CCGGGCCHHHHTTCC----------CCCHHHHHHHHHHHHHH
T ss_pred --------------------------------cccCCCCCCCcCCHHHHhhcccccccccccccCCchHHHHHHHHHHHH
Confidence 1123458999999999875 468889999999999999
Q ss_pred HHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 705 LLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 705 lltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|++|+.||..... .........+......++. .....+.+++.+||+.||++||++.|+++.
T Consensus 232 l~~g~~pf~~~~~--------~~~~~~~~~~~~~~~~~~~--~~~~~l~~li~~~l~~dp~~Rps~~ell~h 293 (313)
T 3cek_A 232 MTYGKTPFQQIIN--------QISKLHAIIDPNHEIEFPD--IPEKDLQDVLKCCLKRDPKQRISIPELLAH 293 (313)
T ss_dssp HHHSSCTTTTCCS--------HHHHHHHHHCTTSCCCCCC--CSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred HHhCCCchhhHHH--------HHHHHHHHHhcccccCCcc--cchHHHHHHHHHHccCCcccCcCHHHHhcC
Confidence 9999999964311 1111222222222211211 134578899999999999999999999863
No 232
>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A
Probab=100.00 E-value=9.6e-38 Score=332.02 Aligned_cols=259 Identities=23% Similarity=0.316 Sum_probs=186.7
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEc-------------cC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG-------------VD 544 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~-------------~~ 544 (791)
....||+|+||.||+|+. .+++.||||++... ....+.+.+|++++++++||||+++++++.+ .+
T Consensus 10 ~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~ 88 (303)
T 1zy4_A 10 EIAVLGQGAFGQVVKARNALDSRYYAIKKIRHT-EEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKS 88 (303)
T ss_dssp EEEEEEECSSEEEEEEEETTTCCEEEEEEEEEE-HHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEE
T ss_pred hhheeccCCcEEEEEEEEcCCCeEEEEEEEecc-HHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCC
Confidence 346899999999999995 57999999999653 3345788999999999999999999998865 35
Q ss_pred ceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccc
Q 003847 545 EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 545 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
..++||||+++++|.+++..... .+++..++.++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++
T Consensus 89 ~~~lv~e~~~~~~L~~~l~~~~~----~~~~~~~~~i~~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~ 164 (303)
T 1zy4_A 89 TLFIQMEYCENGTLYDLIHSENL----NQQRDEYWRLFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAK 164 (303)
T ss_dssp EEEEEEECCCSCBHHHHHHHSCG----GGCHHHHHHHHHHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCS
T ss_pred ceEEEEecCCCCCHHHhhhcccc----ccchHHHHHHHHHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchh
Confidence 67999999999999999976432 37889999999999999999999999999999999999999999999999998
Q ss_pred ccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHH
Q 003847 625 LVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILL 703 (791)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~ 703 (791)
............. ..............||+.|+|||++.+. .++.++|||||||++|
T Consensus 165 ~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~ 222 (303)
T 1zy4_A 165 NVHRSLDILKLDS----------------------QNLPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFF 222 (303)
T ss_dssp CTTC-----------------------------------------------CTTSCHHHHTSCSCCCTHHHHHHHHHHHH
T ss_pred hcccccchhcccc----------------------ccccccccccccCCCcccccCcccccCCCCCcchhhHHHHHHHHH
Confidence 7653221100000 0000011122345689999999999764 6899999999999999
Q ss_pred HHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 704 ELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 704 elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||++ ||.... ........+...............+..+.+++.+||+.||++|||+.|+++
T Consensus 223 ~l~~---p~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 283 (303)
T 1zy4_A 223 EMIY---PFSTGM--------ERVNILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLN 283 (303)
T ss_dssp HHHS---CCSSHH--------HHHHHHHHHHSTTCCCCTTCCTTTSHHHHHHHHHHTCSSGGGSCCHHHHHH
T ss_pred HHHh---ccCCch--------hHHHHHHhccccccccCccccccchHHHHHHHHHHHhcCcccCcCHHHHhC
Confidence 9998 332110 000001111110000000111224456889999999999999999999987
No 233
>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*
Probab=100.00 E-value=9.6e-38 Score=340.11 Aligned_cols=267 Identities=21% Similarity=0.232 Sum_probs=195.5
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEcc-----CceEEEEec
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGV-----DEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~-----~~~~lv~e~ 552 (791)
...||+|+||.||+|+.. +|+.||||++... .......+.+|++++++++||||+++++++... ...++||||
T Consensus 16 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~lv~e~ 95 (353)
T 2b9h_A 16 KSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRPDSFENFNEVYIIQEL 95 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCSCSTTCCCEEEEECC
T ss_pred eeEEcCCCCeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecccccCccceEEEEEec
Confidence 468999999999999954 6899999999754 333456788999999999999999999988754 678999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSS 632 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~ 632 (791)
+. ++|.+++... .+++..+..++.|++.||+|||+.||+||||||+|||++.++.+||+|||+++........
T Consensus 96 ~~-~~L~~~~~~~------~~~~~~~~~~~~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~ 168 (353)
T 2b9h_A 96 MQ-TDLHRVISTQ------MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168 (353)
T ss_dssp CS-EEHHHHHHHC------CCCHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC-----
T ss_pred cC-ccHHHHHhhc------CCCHHHHHHHHHHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEeccccccccccccc
Confidence 96 6999988763 3899999999999999999999999999999999999999999999999999876533211
Q ss_pred CcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 633 SKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~~p 711 (791)
..... .........+||+.|+|||++.+ ..++.++|||||||++|||++|+.|
T Consensus 169 ~~~~~--------------------------~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p 222 (353)
T 2b9h_A 169 NSEPT--------------------------GQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPI 222 (353)
T ss_dssp -------------------------------------CCCCCCGGGCCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCS
T ss_pred ccCcc--------------------------ccccchhhccccccccCCeeeccCCCccchhhHHHHHHHHHHHHhCCCC
Confidence 10000 00011234569999999998764 6789999999999999999999999
Q ss_pred hhccccCC----------------CCcchhchhHHHHHHHHhhhcCccc----hHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 712 VVDELGQG----------------NGLLVEDKNRAIRLADAAIRADFEG----KEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 712 f~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
|.+..... ....... ....+............ .......+.+++.+||+.||++|||+.
T Consensus 223 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rpt~~ 301 (353)
T 2b9h_A 223 FPGRDYRHQLLLIFGIIGTPHSDNDLRCIES-PRAREYIKSLPMYPAAPLEKMFPRVNPKGIDLLQRMLVFDPAKRITAK 301 (353)
T ss_dssp CCCSSHHHHHHHHHHHHCCCCSTTTTTTCCC-HHHHHHHHTSCCCCCCCHHHHSTTSCHHHHHHHHHHSCSSGGGSCCHH
T ss_pred CCCCCcHHHHHHHHHHhCCCchhcccccccc-chhhHHhhcccCCCCcchhhhcccCCHHHHHHHHHhcCcCcccCCCHH
Confidence 96532100 0000000 00011111000000000 012345788999999999999999999
Q ss_pred HHHHH--hccC
Q 003847 772 EALQA--LEKI 780 (791)
Q Consensus 772 evl~~--L~~i 780 (791)
|+++. ++.+
T Consensus 302 ell~hp~~~~~ 312 (353)
T 2b9h_A 302 EALEHPYLQTY 312 (353)
T ss_dssp HHHTSGGGTTT
T ss_pred HHhcCcccccc
Confidence 99973 5544
No 234
>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}
Probab=100.00 E-value=1.5e-37 Score=339.47 Aligned_cols=248 Identities=19% Similarity=0.261 Sum_probs=178.3
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCccceeeEEEccCc-------eEEEEe
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE-------KLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-------~~lv~e 551 (791)
.+.||+|+||.||+|+. .+|+.||||++...... ...+.+|++.++.++||||+++++++...+. .++|||
T Consensus 28 ~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~-~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~~~lv~e 106 (360)
T 3e3p_A 28 ERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRF-RNRELQIMQDLAVLHHPNIVQLQSYFYTLGERDRRDIYLNVVME 106 (360)
T ss_dssp C----------CEEEEETTTCCEEEEEEEECCTTC-CCHHHHHHHHHHHHCCTTBCCEEEEEEEECSSCTTCEEEEEEEE
T ss_pred EEEEecCCCeEEEEEEECCCCCEEEEEEEecCccc-cHHHHHHHHHHHhcCCCCcccHHHhhhccccccccceeEEEEee
Confidence 46899999999999996 46899999998654322 2456778888899999999999999976544 789999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCeecCCCCCCeEecC-CCCeEEeccCcccccCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLH--EKKHVHGNLKPRNVLLGN-DMEPKIGDFGLERLVTG 628 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH--~~~ivHrDlkp~NILl~~-~~~~kL~DFGla~~~~~ 628 (791)
|+++ +|.+.+...... ...+++..+..++.|++.||+||| +.||+||||||+|||++. ++.+||+|||+++....
T Consensus 107 ~~~~-~l~~~~~~~~~~-~~~~~~~~~~~~~~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~ 184 (360)
T 3e3p_A 107 YVPD-TLHRCCRNYYRR-QVAPPPILIKVFLFQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSP 184 (360)
T ss_dssp CCSC-BHHHHHHHHHTT-TCCCCHHHHHHHHHHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCT
T ss_pred cccc-cHHHHHHHHhhc-ccCCCHHHHHHHHHHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCC
Confidence 9976 555544432211 124899999999999999999999 999999999999999996 89999999999986643
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCC-CCCCchhhHHHHHHHHHHHh
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSI-KPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~-~~~~~sDvwSlGvil~ellt 707 (791)
... .....||+.|+|||++.+. .++.++|||||||++|||++
T Consensus 185 ~~~-------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~ell~ 227 (360)
T 3e3p_A 185 SEP-------------------------------------NVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIFAEMML 227 (360)
T ss_dssp TSC-------------------------------------CCSTTSCGGGCCHHHHTTCSSCCTHHHHHHHHHHHHHHHH
T ss_pred CCC-------------------------------------cccccCCcceeCHHHHcCCCCCCcHHHHHHHHHHHHHHHh
Confidence 211 1234589999999998654 48999999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHh----------h-h----------cCc-------cchHHHHHHHHHHHhhc
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAA----------I-R----------ADF-------EGKEEALLSCFKLGYSC 759 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~----------~-~----------~~~-------~~~~~~~~~l~~li~~c 759 (791)
|+.||...... .....+.... + . ... .........+.+|+.+|
T Consensus 228 g~~pf~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~ 298 (360)
T 3e3p_A 228 GEPIFRGDNSA---------GQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKGIPWSNVFSDHSLKDAKEAYDLLSAL 298 (360)
T ss_dssp SSCSSCCSSHH---------HHHHHHHHHHCCCCHHHHHHHCTTCCCGGGGCCCCCCHHHHTTTCCCTTHHHHHHHHHHH
T ss_pred CCCCcCCCChH---------HHHHHHHHHcCCCCHHHHHhcccchhhccccccccCCcccccchhhccccHHHHHHHHHH
Confidence 99999653211 0011111000 0 0 000 00001356789999999
Q ss_pred cCCCCCCCCCHHHHHHH
Q 003847 760 ASPLPQKRPSMKEALQA 776 (791)
Q Consensus 760 l~~dP~~RPs~~evl~~ 776 (791)
|+.||++|||+.|+++.
T Consensus 299 L~~dP~~Rpt~~e~l~h 315 (360)
T 3e3p_A 299 LQYLPEERMKPYEALCH 315 (360)
T ss_dssp TCSSGGGSCCHHHHTTS
T ss_pred hccCccccCCHHHHhcC
Confidence 99999999999999874
No 235
>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*
Probab=100.00 E-value=2.7e-37 Score=340.37 Aligned_cols=192 Identities=21% Similarity=0.282 Sum_probs=164.1
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-CC-----CccceeeEEEccCceEEEEec
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-HP-----NLVRIRGFYWGVDEKLIIYDF 552 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~-----nIv~l~~~~~~~~~~~lv~e~ 552 (791)
.+.||+|+||.||+|+. .+++.||||+++... ...+++..|+++++.++ |+ +|+++++++...+..++||||
T Consensus 59 ~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~~~~~~~~lv~e~ 137 (382)
T 2vx3_A 59 DSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKK-AFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHFMFRNHLCLVFEM 137 (382)
T ss_dssp EEEEEEETTEEEEEEEETTTTEEEEEEEECSSH-HHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEEEETTEEEEEEEC
T ss_pred EEEEeecCCEEEEEEEEcCCCcEEEEEEEeccH-HHHHHHHHHHHHHHHHHhcccccceeEEEeeeeeccCCceEEEEec
Confidence 46899999999999995 468999999997543 33467788999998885 55 499999999999999999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh--cCCCeecCCCCCCeEec--CCCCeEEeccCcccccCC
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLH--EKKHVHGNLKPRNVLLG--NDMEPKIGDFGLERLVTG 628 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH--~~~ivHrDlkp~NILl~--~~~~~kL~DFGla~~~~~ 628 (791)
++ ++|.+++...... .+++..++.++.|++.||+||| +.||+||||||+|||++ .++.+||+|||+++....
T Consensus 138 ~~-~~L~~~l~~~~~~---~~~~~~~~~i~~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~ 213 (382)
T 2vx3_A 138 LS-YNLYDLLRNTNFR---GVSLNLTRKFAQQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQ 213 (382)
T ss_dssp CC-CBHHHHHHHTTTS---CCCHHHHHHHHHHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTC
T ss_pred CC-CCHHHHHhhcCcC---CCCHHHHHHHHHHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccc
Confidence 95 5999998875432 3899999999999999999999 47999999999999994 578899999999987542
Q ss_pred CCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhC
Q 003847 629 DTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG 708 (791)
. .....||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 214 ~---------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg 254 (382)
T 2vx3_A 214 R---------------------------------------IYQYIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTG 254 (382)
T ss_dssp C---------------------------------------CCSSCSCGGGCCHHHHTTCCCCTHHHHHHHHHHHHHHHHS
T ss_pred c---------------------------------------cccccCCccccChHHHcCCCCCcHHHHHHHHHHHHHHHhC
Confidence 1 1124589999999999999999999999999999999999
Q ss_pred Ccchhcc
Q 003847 709 KVIVVDE 715 (791)
Q Consensus 709 ~~pf~~~ 715 (791)
+.||...
T Consensus 255 ~~pf~~~ 261 (382)
T 2vx3_A 255 EPLFSGA 261 (382)
T ss_dssp SCSSCCS
T ss_pred CCCCCCC
Confidence 9999653
No 236
>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B
Probab=100.00 E-value=1.3e-37 Score=335.09 Aligned_cols=247 Identities=23% Similarity=0.267 Sum_probs=190.9
Q ss_pred cceeccccCceEEEEEEe--CCCcEEEEEEcCCCch--hhHHHHHHHHHHHhcc---CCCCccceeeEEE-----ccCce
Q 003847 479 SAYILGASGSSIMYKAVL--EDGTALAVRRIGENSV--DRFRDFETQVRVIAKL---VHPNLVRIRGFYW-----GVDEK 546 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~--~~g~~vavK~~~~~~~--~~~~~~~~E~~~l~~l---~H~nIv~l~~~~~-----~~~~~ 546 (791)
....||+|+||.||+|+. .+|+.||||++..... .....+.+|+.+++.+ +||||+++++++. .....
T Consensus 15 ~~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~~ 94 (326)
T 1blx_A 15 CVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKL 94 (326)
T ss_dssp EEEEEEEETTEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEEECSSEEEE
T ss_pred eeeeecccccEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeecccCCCceE
Confidence 346899999999999996 4689999999864321 1123566777777666 8999999999987 55678
Q ss_pred EEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 547 LIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 547 ~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
++||||++ |+|.+++...... .+++..+..++.|++.||+|||+.||+||||||+||+++.++.+||+|||+++..
T Consensus 95 ~lv~e~~~-~~L~~~l~~~~~~---~~~~~~~~~~~~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~ 170 (326)
T 1blx_A 95 TLVFEHVD-QDLTTYLDKVPEP---GVPTETIKDMMFQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIY 170 (326)
T ss_dssp EEEEECCS-CBHHHHHHHSCTT---CSCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCC
T ss_pred EEEEecCC-CCHHHHHHhcccC---CCCHHHHHHHHHHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccc
Confidence 99999997 6999998765432 3899999999999999999999999999999999999999999999999998765
Q ss_pred CCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHH
Q 003847 627 TGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELL 706 (791)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ell 706 (791)
.... ......||+.|+|||++.+..++.++|||||||++|||+
T Consensus 171 ~~~~-------------------------------------~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~ 213 (326)
T 1blx_A 171 SFQM-------------------------------------ALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMF 213 (326)
T ss_dssp CGGG-------------------------------------GGCCCCCCCTTCCHHHHTTCCCCTHHHHHHHHHHHHHHH
T ss_pred cCCC-------------------------------------CccccccccceeCHHHHhcCCCCcchhHHHHHHHHHHHH
Confidence 3211 011235899999999999989999999999999999999
Q ss_pred hCCcchhccccCCCCcchhchhHHHHHHHHhhhc----------------------C-ccchHHHHHHHHHHHhhccCCC
Q 003847 707 TGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRA----------------------D-FEGKEEALLSCFKLGYSCASPL 763 (791)
Q Consensus 707 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------~-~~~~~~~~~~l~~li~~cl~~d 763 (791)
+|+.||...... .....+.+..... . ..........+.+|+.+||+.|
T Consensus 214 ~g~~pf~~~~~~---------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~d 284 (326)
T 1blx_A 214 RRKPLFRGSSDV---------DQLGKILDVIGLPGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFN 284 (326)
T ss_dssp HSSCSCCCSSHH---------HHHHHHHHHHCCCCGGGSCTTCSSCGGGSCCCCCCCGGGTCCSCCHHHHHHHHHHSCSS
T ss_pred cCCCCCCCCCHH---------HHHHHHHHHcCCCCcccCccccccchhhhcccCcchhhhccccCCHHHHHHHHHHcCCC
Confidence 999999653210 0111111100000 0 0000113456789999999999
Q ss_pred CCCCCCHHHHHH
Q 003847 764 PQKRPSMKEALQ 775 (791)
Q Consensus 764 P~~RPs~~evl~ 775 (791)
|++|||+.|+++
T Consensus 285 P~~Rpt~~e~l~ 296 (326)
T 1blx_A 285 PAKRISAYSALS 296 (326)
T ss_dssp TTTSCCHHHHHT
T ss_pred cccCCCHHHHhc
Confidence 999999999995
No 237
>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}
Probab=100.00 E-value=8.9e-38 Score=348.74 Aligned_cols=247 Identities=23% Similarity=0.269 Sum_probs=184.1
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCC
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNG 556 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~g 556 (791)
...++||+|+||+||.....+|+.||||++..... ..+.+|+++++++ +|||||++++++.+.+..|+||||+. |
T Consensus 27 ~~~~~LG~G~~G~V~~~~~~~~~~vAvK~~~~~~~---~~~~~E~~~l~~l~~HpnIv~l~~~~~~~~~~~lv~E~~~-g 102 (432)
T 3p23_A 27 CPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECF---SFADREVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCA-A 102 (432)
T ss_dssp EEEEEEEECGGGCEEEEEESSSSEEEEEEECTTTE---EECHHHHHHHHHSCCCTTBCCEEEEEEETTEEEEEEECCS-E
T ss_pred ecCCeeecCcCEEEEEEEEeCCeEEEEEEECHHHH---HHHHHHHHHHHhccCCCCcCeEEEEEecCCEEEEEEECCC-C
Confidence 34578999999997665566899999999976433 2356899999999 79999999999999999999999996 6
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC-----CCCeEEeccCcccccCCCCC
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN-----DMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~-----~~~~kL~DFGla~~~~~~~~ 631 (791)
+|.+++...... ..+..+..|+.||+.||+|||+.||+||||||+|||++. ...+||+|||+++.......
T Consensus 103 ~L~~~l~~~~~~----~~~~~~~~i~~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~ 178 (432)
T 3p23_A 103 TLQEYVEQKDFA----HLGLEPITLLQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRH 178 (432)
T ss_dssp EHHHHHHSSSCC----CCSSCHHHHHHHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC-----
T ss_pred CHHHHHHhcCCC----ccchhHHHHHHHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCc
Confidence 999998765432 455567899999999999999999999999999999953 33588999999987643211
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc---CCCCCCchhhHHHHHHHHHHHh-
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR---SIKPNPKWDVYSFGVILLELLT- 707 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~---~~~~~~~sDvwSlGvil~ellt- 707 (791)
.. ......+||+.|+|||++. ...++.++|||||||++|||++
T Consensus 179 ~~---------------------------------~~~~~~~gt~~y~APE~l~~~~~~~~t~~~DiwSlG~il~ellt~ 225 (432)
T 3p23_A 179 SF---------------------------------SRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISE 225 (432)
T ss_dssp ----------------------------------------CCSCTTSCCGGGTSCC---CCCTHHHHHHHHHHHHHHHTT
T ss_pred ce---------------------------------eeccccCCCcCccChhhhhcccccCCCcHHHHHHHHHHHHHHHcC
Confidence 10 1122356999999999997 4567889999999999999999
Q ss_pred CCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 708 GKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 708 G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
|+.||...... .......................+.+|+.+||+.||++|||+.|+++
T Consensus 226 g~~pf~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~evl~ 283 (432)
T 3p23_A 226 GSHPFGKSLQR----------QANILLGACSLDCLHPEKHEDVIARELIEKMIAMDPQKRPSAKHVLK 283 (432)
T ss_dssp SCBTTBSTTTH----------HHHHHTTCCCCTTSCTTCHHHHHHHHHHHHHSCSSGGGSCCHHHHHT
T ss_pred CCCCcchhhHH----------HHHHHhccCCccccCccccccHHHHHHHHHHHhCCHhhCCCHHHHHh
Confidence 88888543111 00111110001111112224556789999999999999999999984
No 238
>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}
Probab=100.00 E-value=2.5e-37 Score=336.90 Aligned_cols=250 Identities=21% Similarity=0.250 Sum_probs=188.9
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCC--chhhHHHHHHHHHHHhccCCCCccceeeEEEccCc------eEEEE
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGEN--SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE------KLIIY 550 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~--~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~------~~lv~ 550 (791)
...||+|+||.||+|+. .+|+.||||++... .....+.+.+|+.++++++||||+++++++...+. .++||
T Consensus 29 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~lv~ 108 (353)
T 3coi_A 29 PTHVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPASSLRNFYDFYLVM 108 (353)
T ss_dssp EEEEEECSSEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCSSGGGCCCCEEEE
T ss_pred eeeEecCCCeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEecccccccceeEEEEe
Confidence 46899999999999995 56999999999764 23335678899999999999999999999987654 49999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~ 630 (791)
||++ ++|.+++.. .+++..+..++.||+.||+|||+.||+||||||+||+++.++.+||+|||+++.....
T Consensus 109 e~~~-~~l~~~~~~-------~~~~~~~~~i~~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~- 179 (353)
T 3coi_A 109 PFMQ-TDLQKIMGL-------KFSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE- 179 (353)
T ss_dssp ECCS-EEGGGTTTS-------CCCHHHHHHHHHHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC-----
T ss_pred cccc-CCHHHHhcC-------CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCC-
Confidence 9997 688776532 3899999999999999999999999999999999999999999999999998754321
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-CCCCCchhhHHHHHHHHHHHhCC
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-IKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-~~~~~~sDvwSlGvil~elltG~ 709 (791)
.....||+.|+|||++.+ ..++.++|||||||++|||++|+
T Consensus 180 --------------------------------------~~~~~~t~~y~aPE~~~~~~~~~~~~Di~slG~il~el~~g~ 221 (353)
T 3coi_A 180 --------------------------------------MTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221 (353)
T ss_dssp ------------------------------------------CCSBCCSCHHHHSCCSCCCTTHHHHHHHHHHHHHHHSS
T ss_pred --------------------------------------ccccccCcCcCCHHHHhCcCCCCchhhHHHHHHHHHHHHhCC
Confidence 112348999999999876 67899999999999999999999
Q ss_pred cchhccccCCCCcchhc--------------hhHHHHHHHHhh---hcCc-cchHHHHHHHHHHHhhccCCCCCCCCCHH
Q 003847 710 VIVVDELGQGNGLLVED--------------KNRAIRLADAAI---RADF-EGKEEALLSCFKLGYSCASPLPQKRPSMK 771 (791)
Q Consensus 710 ~pf~~~~~~~~~~~~~~--------------~~~~~~~~~~~~---~~~~-~~~~~~~~~l~~li~~cl~~dP~~RPs~~ 771 (791)
.||...........+.. ............ ...+ .........+.+++.+||+.||++|||+.
T Consensus 222 ~pf~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rpt~~ 301 (353)
T 3coi_A 222 TLFKGKDYLDQLTQILKVTGVPGTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAA 301 (353)
T ss_dssp CSSBSSCHHHHHHHHHHHHCBCCHHHHTTCSCHHHHHHHHTSCBCSSCCTTTTCTTSCHHHHHHHHHHSCSCTTTSCCHH
T ss_pred CCCCCCCHHHHHHHHHHHhCCCCHHHHHHHhhHHHHHHHHhCcCCCCccHHHhcCCcCHHHHHHHHHHcCCCcccCCCHH
Confidence 99965321000000000 000000000000 0000 00112356789999999999999999999
Q ss_pred HHHHH
Q 003847 772 EALQA 776 (791)
Q Consensus 772 evl~~ 776 (791)
|+++.
T Consensus 302 e~l~h 306 (353)
T 3coi_A 302 QALTH 306 (353)
T ss_dssp HHHTS
T ss_pred HHhcC
Confidence 99864
No 239
>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...
Probab=100.00 E-value=2.3e-38 Score=340.11 Aligned_cols=235 Identities=19% Similarity=0.306 Sum_probs=192.3
Q ss_pred cceeccccCceEEEEEE-eCCCcEEEEEEcCCCchh------hHHHHHHHHHHHhccC--CCCccceeeEEEccCceEEE
Q 003847 479 SAYILGASGSSIMYKAV-LEDGTALAVRRIGENSVD------RFRDFETQVRVIAKLV--HPNLVRIRGFYWGVDEKLII 549 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~~~~~lv 549 (791)
..+.||+|+||.||+|+ ..+++.||||++...... ..+.+.+|+.++++++ |+||+++++++...+..++|
T Consensus 47 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~~~~~~~~lv 126 (320)
T 3a99_A 47 VGPLLGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI 126 (320)
T ss_dssp EEEECSSSSSCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEEECSSEEEEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEEecCCcEEEE
Confidence 34689999999999998 457899999999654221 2245678999999996 59999999999999999999
Q ss_pred EeccCC-CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec-CCCCeEEeccCcccccC
Q 003847 550 YDFVPN-GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG-NDMEPKIGDFGLERLVT 627 (791)
Q Consensus 550 ~e~~~~-gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~-~~~~~kL~DFGla~~~~ 627 (791)
|||+.+ ++|.+++.... .+++..++.++.||+.||+|||+.||+||||||+|||++ .++.+||+|||+++...
T Consensus 127 ~e~~~~~~~L~~~l~~~~-----~l~~~~~~~i~~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~ 201 (320)
T 3a99_A 127 LERPEPVQDLFDFITERG-----ALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLK 201 (320)
T ss_dssp EECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECC
T ss_pred EEcCCCCccHHHHHhccC-----CCCHHHHHHHHHHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCccccccc
Confidence 999976 89999988754 389999999999999999999999999999999999999 78899999999998764
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHHHH
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLELL 706 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~ell 706 (791)
... .....||+.|+|||++.+..+ +.++||||||+++|||+
T Consensus 202 ~~~--------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~Di~slG~il~el~ 243 (320)
T 3a99_A 202 DTV--------------------------------------YTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMV 243 (320)
T ss_dssp SSC--------------------------------------BCCCCSCGGGSCHHHHHHSCBCHHHHHHHHHHHHHHHHH
T ss_pred ccc--------------------------------------ccCCCCCccCCChHHhccCCCCCccchHHhHHHHHHHHH
Confidence 211 112348999999999987665 68899999999999999
Q ss_pred hCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 707 TGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 707 tG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+|+.||.... .... ............+.+++.+||+.||++|||++|+++
T Consensus 244 ~g~~pf~~~~---------------~~~~----~~~~~~~~~~~~~~~li~~~l~~dp~~Rps~~~ll~ 293 (320)
T 3a99_A 244 CGDIPFEHDE---------------EIIR----GQVFFRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293 (320)
T ss_dssp HSSCSCCSHH---------------HHHH----CCCCCSSCCCHHHHHHHHHHTCSSGGGSCCHHHHHT
T ss_pred HCCCCCCChh---------------hhhc----ccccccccCCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 9999985421 0111 111111123467889999999999999999999987
No 240
>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}
Probab=100.00 E-value=5.1e-38 Score=336.17 Aligned_cols=236 Identities=21% Similarity=0.325 Sum_probs=188.3
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCchh------hHHHHHHHHHHHhcc----CCCCccceeeEEEccCceE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENSVD------RFRDFETQVRVIAKL----VHPNLVRIRGFYWGVDEKL 547 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~------~~~~~~~E~~~l~~l----~H~nIv~l~~~~~~~~~~~ 547 (791)
..+.||+|+||.||+|+. .+++.||||++...... ....+.+|+++++++ +|+||+++++++...+..+
T Consensus 35 ~~~~lg~G~~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~~~~~~~~ 114 (312)
T 2iwi_A 35 LGPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFM 114 (312)
T ss_dssp EEEEEEEETTEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-----CE
T ss_pred EeeEEEcCCCEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEEecCCeEE
Confidence 356899999999999984 57899999999764321 223456789999988 8999999999999999999
Q ss_pred EEEec-cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEec-CCCCeEEeccCcccc
Q 003847 548 IIYDF-VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLG-NDMEPKIGDFGLERL 625 (791)
Q Consensus 548 lv~e~-~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~-~~~~~kL~DFGla~~ 625 (791)
+|||| +.+++|.+++.... .+++..++.++.||+.||+|||+.||+||||||+||+++ .++.+||+|||+++.
T Consensus 115 ~v~e~~~~~~~L~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~ 189 (312)
T 2iwi_A 115 LVLERPLPAQDLFDYITEKG-----PLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGAL 189 (312)
T ss_dssp EEEECCSSEEEHHHHHHHHC-----SCCHHHHHHHHHHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEE
T ss_pred EEEEecCCCCCHHHHHHhcC-----CCCHHHHHHHHHHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhh
Confidence 99999 78999999998754 389999999999999999999999999999999999999 889999999999987
Q ss_pred cCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCC-CCchhhHHHHHHHHH
Q 003847 626 VTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKP-NPKWDVYSFGVILLE 704 (791)
Q Consensus 626 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~-~~~sDvwSlGvil~e 704 (791)
..... .....||..|+|||++.+..+ +.++||||||+++||
T Consensus 190 ~~~~~--------------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~ 231 (312)
T 2iwi_A 190 LHDEP--------------------------------------YTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYD 231 (312)
T ss_dssp CCSSC--------------------------------------BCCCCSCTTTSCHHHHHHSCBCHHHHHHHHHHHHHHH
T ss_pred cccCc--------------------------------------ccccCCcccccCceeeecCCCCCccchHHHHHHHHHH
Confidence 64321 112348999999999977666 458999999999999
Q ss_pred HHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 705 LLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 705 lltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
|++|+.||.... ..... ...........+.+++.+||+.||++|||++|+++.
T Consensus 232 l~~g~~pf~~~~---------------~~~~~----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~ 284 (312)
T 2iwi_A 232 MVCGDIPFERDQ---------------EILEA----ELHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLD 284 (312)
T ss_dssp HHHSSCSCCSHH---------------HHHHT----CCCCCTTSCHHHHHHHHHHTCSSTTTSCCHHHHHHS
T ss_pred HHHCCCCCCChH---------------HHhhh----ccCCcccCCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 999999985421 11111 111112245678899999999999999999999983
No 241
>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*
Probab=100.00 E-value=2.9e-37 Score=336.26 Aligned_cols=252 Identities=18% Similarity=0.246 Sum_probs=191.9
Q ss_pred ceeccccCceEEEEEEeC-CC-cEEEEEEcCCCchhhHHHHHHHHHHHhccCCCC------ccceeeEEEccCceEEEEe
Q 003847 480 AYILGASGSSIMYKAVLE-DG-TALAVRRIGENSVDRFRDFETQVRVIAKLVHPN------LVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g-~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n------Iv~l~~~~~~~~~~~lv~e 551 (791)
.+.||+|+||.||+|... ++ +.||||+++... ...+.+.+|++++++++|++ ++.+++++...+..++|||
T Consensus 24 ~~~lg~G~~g~V~~~~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~lv~e 102 (355)
T 2eu9_A 24 VGNLGEGTFGKVVECLDHARGKSQVALKIIRNVG-KYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFE 102 (355)
T ss_dssp EEEEEEETTEEEEEEEETTTTTEEEEEEEECSCH-HHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEEEETTEEEEEEE
T ss_pred EEEeeccCCeEEEEEEecCCCceEEEEEEEcccc-cchhHHHHHHHHHHHHhhcCCCCceeEEEeeeeeeeCCeEEEEEe
Confidence 468999999999999953 44 799999997643 33467889999999997665 9999999999999999999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEe-------------------cCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLL-------------------GND 612 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl-------------------~~~ 612 (791)
|+ +++|.+++...... .+++.+++.|+.||+.||+|||+.||+||||||+|||+ +.+
T Consensus 103 ~~-~~~l~~~l~~~~~~---~~~~~~~~~i~~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~ 178 (355)
T 2eu9_A 103 LL-GKNTFEFLKENNFQ---PYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKN 178 (355)
T ss_dssp CC-CCBHHHHHHHTTTC---CCCHHHHHHHHHHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESC
T ss_pred cc-CCChHHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCC
Confidence 99 66777777654322 38999999999999999999999999999999999999 567
Q ss_pred CCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCc
Q 003847 613 MEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPK 692 (791)
Q Consensus 613 ~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~ 692 (791)
+.+||+|||+++..... .....||+.|+|||++.+..++.+
T Consensus 179 ~~~kl~Dfg~~~~~~~~---------------------------------------~~~~~gt~~y~aPE~~~~~~~~~~ 219 (355)
T 2eu9_A 179 TSIRVADFGSATFDHEH---------------------------------------HTTIVATRHYRPPEVILELGWAQP 219 (355)
T ss_dssp CCEEECCCTTCEETTSC---------------------------------------CCSSCSCGGGCCHHHHTTCCCCTH
T ss_pred CcEEEeecCcccccccc---------------------------------------ccCCcCCCcccCCeeeecCCCCCc
Confidence 89999999999764321 112458999999999999999999
Q ss_pred hhhHHHHHHHHHHHhCCcchhccccCCCCcchhc----------------------------hhHHHHHHHHh---hhcC
Q 003847 693 WDVYSFGVILLELLTGKVIVVDELGQGNGLLVED----------------------------KNRAIRLADAA---IRAD 741 (791)
Q Consensus 693 sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~----------------------------~~~~~~~~~~~---~~~~ 741 (791)
+|||||||++|||++|+.||...........+.. ........... ....
T Consensus 220 ~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (355)
T 2eu9_A 220 CDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKENCKPLKSY 299 (355)
T ss_dssp HHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCHHHHHHCSCGGGEETTEECCCTTSHHHHHHHHHCCCGGGG
T ss_pred cchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCcHHHhhhccchhhhcccccccccccchhccccccCCccccc
Confidence 9999999999999999999965321100000000 00000000000 0000
Q ss_pred ccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 742 FEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 742 ~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
..........+.+|+.+||+.||++|||+.|+++
T Consensus 300 ~~~~~~~~~~l~~li~~~L~~dP~~Rpt~~e~l~ 333 (355)
T 2eu9_A 300 MLQDSLEHVQLFDLMRRMLEFDPAQRITLAEALL 333 (355)
T ss_dssp CSCCSHHHHHHHHHHHHHTCSSTTTSCCHHHHTT
T ss_pred ccccchhHHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 0111224568899999999999999999999985
No 242
>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*
Probab=100.00 E-value=7e-38 Score=337.46 Aligned_cols=250 Identities=23% Similarity=0.293 Sum_probs=174.2
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCCc-hhhHHHHHHHHH-HHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGENS-VDRFRDFETQVR-VIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~-~~~~~~~~~E~~-~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
....||+|+||.||+|.. .+|+.||||++.... .....++..|+. +++.++||||+++++++...+..++||||+++
T Consensus 26 ~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~~~~~~~~lv~e~~~~ 105 (327)
T 3aln_A 26 DLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMST 105 (327)
T ss_dssp C-CEEEECSSEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEEECSSEEEEEECCCSE
T ss_pred ehheeccCCCEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEEEeCCceEEEEeecCC
Confidence 356899999999999996 479999999997642 333445666666 67778999999999999999999999999975
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
+|.+++..........+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||+++.......
T Consensus 106 -~l~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~--- 181 (327)
T 3aln_A 106 -SFDKFYKYVYSVLDDVIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIA--- 181 (327)
T ss_dssp -EHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---------
T ss_pred -ChHHHHHHHHhhhcccCcHHHHHHHHHHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceecccccc---
Confidence 888877643221122489999999999999999999998 999999999999999999999999999976542211
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccc----cCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESL----RSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~----~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
.....||+.|+|||++ .+..++.++||||||+++|||++|+.
T Consensus 182 ----------------------------------~~~~~gt~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~ 227 (327)
T 3aln_A 182 ----------------------------------KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRF 227 (327)
T ss_dssp ----------------------------------------------------------CCSHHHHHHHHHHHHHHHHSCC
T ss_pred ----------------------------------cccCCCCccccCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCC
Confidence 1122489999999998 45678999999999999999999999
Q ss_pred chhccccC--CCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 711 IVVDELGQ--GNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 711 pf~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
||...... .......... +.+.. .........+.+++.+||+.||++|||+.|+++
T Consensus 228 pf~~~~~~~~~~~~~~~~~~-------~~~~~--~~~~~~~~~l~~li~~~l~~dp~~Rps~~ell~ 285 (327)
T 3aln_A 228 PYPKWNSVFDQLTQVVKGDP-------PQLSN--SEEREFSPSFINFVNLCLTKDESKRPKYKELLK 285 (327)
T ss_dssp CSSCC-------CCCCCSCC-------CCCCC--CSSCCCCHHHHHHHHHHTCSSGGGSCCHHHHTT
T ss_pred CCCCcchHHHHHHHHhcCCC-------CCCCC--cccccCCHHHHHHHHHHhhCChhhCcCHHHHHh
Confidence 99653211 0000000000 00000 000113467889999999999999999999965
No 243
>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*
Probab=100.00 E-value=9.7e-38 Score=349.37 Aligned_cols=249 Identities=22% Similarity=0.260 Sum_probs=184.4
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEEEeccCCCCh
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.++||+|+||+||.+...+|+.||||++.... .+.+.+|+++++++ +||||+++++++.+.+..|+||||+. |+|
T Consensus 20 ~~~LG~G~~g~V~~~~~~~g~~vAvK~~~~~~---~~~~~~E~~~l~~l~~HpnIv~~~~~~~~~~~~~lv~E~~~-gsL 95 (434)
T 2rio_A 20 EKILGYGSSGTVVFQGSFQGRPVAVKRMLIDF---CDIALMEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCN-LNL 95 (434)
T ss_dssp EEEEEECSTTCEEEEEESSSSEEEEEEEEGGG---HHHHHHHHHHHHHHTTSTTBCCEEEEEECSSEEEEEECCCS-EEH
T ss_pred cCeEeeCCCeEEEEEEEECCeEEEEEEEcHHH---HHHHHHHHHHHHhccCCCCcCeEEEEEecCCeEEEEEecCC-CCH
Confidence 46899999999987777789999999986542 35678899999886 89999999999999999999999995 699
Q ss_pred hHHHHhhcCCCC--CCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCC-------------CCeEEeccCcc
Q 003847 559 ANARYRKMGSSP--CHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGND-------------MEPKIGDFGLE 623 (791)
Q Consensus 559 ~~~l~~~~~~~~--~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~-------------~~~kL~DFGla 623 (791)
.+++........ ...++..++.|+.||+.||+|||+.||+||||||+|||++.+ +.+||+|||++
T Consensus 96 ~~~l~~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a 175 (434)
T 2rio_A 96 QDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC 175 (434)
T ss_dssp HHHHHTC------------CCHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTC
T ss_pred HHHHhccCCCchhhhhccchhHHHHHHHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEcccccc
Confidence 999976543211 011334567899999999999999999999999999999754 47999999999
Q ss_pred cccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC-------CCCCCchhhH
Q 003847 624 RLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS-------IKPNPKWDVY 696 (791)
Q Consensus 624 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~-------~~~~~~sDvw 696 (791)
+.......... ......+||+.|+|||++.+ ..++.++|||
T Consensus 176 ~~~~~~~~~~~--------------------------------~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~~Diw 223 (434)
T 2rio_A 176 KKLDSGQSSFR--------------------------------TNLNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIF 223 (434)
T ss_dssp EECCC----------------------------------------------CCTTSCHHHHSCCCTTSCCCCCCTHHHHH
T ss_pred eecCCCCccce--------------------------------eeecCCCCCCCccCHHHhccccccccccCcchhhhhH
Confidence 87653221100 01123469999999999975 6789999999
Q ss_pred HHHHHHHHHHh-CCcchhccccCCCCcchhchhHHHHHHHHhhh-c--CccchHHHHHHHHHHHhhccCCCCCCCCCHHH
Q 003847 697 SFGVILLELLT-GKVIVVDELGQGNGLLVEDKNRAIRLADAAIR-A--DFEGKEEALLSCFKLGYSCASPLPQKRPSMKE 772 (791)
Q Consensus 697 SlGvil~ellt-G~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~e 772 (791)
||||++|||++ |+.||.+.... . ..+...... . ...........+.+++.+||+.||++|||+.|
T Consensus 224 SlG~il~ellt~g~~Pf~~~~~~-------~----~~i~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~Rps~~e 292 (434)
T 2rio_A 224 SMGCVFYYILSKGKHPFGDKYSR-------E----SNIIRGIFSLDEMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMK 292 (434)
T ss_dssp HHHHHHHHHHTTSCCTTCSTTTH-------H----HHHHHTCCCCCCCTTCCCHHHHHHHHHHHHHHTCSSGGGSCCHHH
T ss_pred hHHHHHHHHHhCCCCCCCCchhh-------H----HHHhcCCCCcccccccccccchHHHHHHHHHHhhCChhhCCCHHH
Confidence 99999999999 89998543211 0 111111100 0 00112345678899999999999999999999
Q ss_pred HHH
Q 003847 773 ALQ 775 (791)
Q Consensus 773 vl~ 775 (791)
+++
T Consensus 293 il~ 295 (434)
T 2rio_A 293 VLR 295 (434)
T ss_dssp HHT
T ss_pred HHh
Confidence 985
No 244
>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}
Probab=100.00 E-value=3.3e-37 Score=330.61 Aligned_cols=247 Identities=21% Similarity=0.300 Sum_probs=175.2
Q ss_pred hcceeccccCceEEEEEEeC-CCcEEEEEEcCCCch-hh-HHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccC
Q 003847 478 ASAYILGASGSSIMYKAVLE-DGTALAVRRIGENSV-DR-FRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVP 554 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-~~-~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~ 554 (791)
.....||+|+||.||+|+.. +|+.||||++..... .. .+.+..+..+++.++||||+++++++...+..++||||+
T Consensus 28 ~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~~~~~~~~lv~e~~- 106 (318)
T 2dyl_A 28 ENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTFITNTDVFIAMELM- 106 (318)
T ss_dssp EEEEEC------CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEECSSEEEEEECCC-
T ss_pred cccceeeecCCeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEEecCCcEEEEEecc-
Confidence 34568999999999999964 789999999976432 22 233445556788889999999999999999999999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC-CCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCC
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-KHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSS 633 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~ 633 (791)
++.+..+...... .+++..+..++.|++.||+|||+. ||+||||||+||+++.++.+||+|||++........
T Consensus 107 ~~~~~~l~~~~~~----~~~~~~~~~~~~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~-- 180 (318)
T 2dyl_A 107 GTCAEKLKKRMQG----PIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKA-- 180 (318)
T ss_dssp SEEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC----------
T ss_pred CCcHHHHHHHhcc----CCCHHHHHHHHHHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCcc--
Confidence 5555555443322 389999999999999999999995 999999999999999999999999999876542211
Q ss_pred cCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCccccc-----CCCCCCchhhHHHHHHHHHHHhC
Q 003847 634 KAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLR-----SIKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~-----~~~~~~~sDvwSlGvil~elltG 708 (791)
.....||+.|+|||++. ...++.++||||||+++|||++|
T Consensus 181 -----------------------------------~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g 225 (318)
T 2dyl_A 181 -----------------------------------KDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATG 225 (318)
T ss_dssp -----------------------------------------CCTTCCHHHHC--------CCTHHHHHHHHHHHHHHHHS
T ss_pred -----------------------------------ccccCCCccccChhhcccccccccCCccccchhhHHHHHHHHHhC
Confidence 11234899999999994 56789999999999999999999
Q ss_pred CcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHH
Q 003847 709 KVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 709 ~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~ 775 (791)
+.||..... ........... .....+.....+..+.+++.+||+.||.+||+++|+++
T Consensus 226 ~~pf~~~~~--------~~~~~~~~~~~-~~~~~~~~~~~~~~l~~li~~~l~~dp~~Rps~~~ll~ 283 (318)
T 2dyl_A 226 QFPYKNCKT--------DFEVLTKVLQE-EPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLE 283 (318)
T ss_dssp SCTTTTCCS--------HHHHHHHHHHS-CCCCCCSSSCCCHHHHHHHHHHTCSCTTTSCCHHHHTT
T ss_pred CCCCCCCCc--------cHHHHHHHhcc-CCCCCCccCCCCHHHHHHHHHHccCChhHCcCHHHHhh
Confidence 999964211 01111111111 11111111123467889999999999999999999976
No 245
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=100.00 E-value=1.5e-36 Score=324.74 Aligned_cols=255 Identities=30% Similarity=0.560 Sum_probs=205.7
Q ss_pred CCChhhHHHHHHHHhhccCCCCCccCCCCCCCCCCce--eeeeeeCCCCCCCCCCcEEEEEcCCCCCcc--CCCcCCCCC
Q 003847 29 LGLNTDGVLLLSFKYSVLSDPLGVLGSWNYNDENPCS--WNGVTCASPGEGNNDSRVIGLALPNSQLLG--SIPADLGMI 104 (791)
Q Consensus 29 ~~~~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~c~--w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~--~~~~~~~~l 104 (791)
.|.++|..||++||.++ .||. .+++|+. +.+||. |.||+|+... ..++|+.|+|++|++.| .+|..|+++
T Consensus 2 ~c~~~~~~aL~~~k~~~-~~~~-~l~~W~~-~~~~C~~~w~gv~C~~~~---~~~~l~~L~L~~~~l~~~~~~~~~l~~l 75 (313)
T 1ogq_A 2 LCNPQDKQALLQIKKDL-GNPT-TLSSWLP-TTDCCNRTWLGVLCDTDT---QTYRVNNLDLSGLNLPKPYPIPSSLANL 75 (313)
T ss_dssp CSCHHHHHHHHHHHHHT-TCCG-GGTTCCT-TSCTTTTCSTTEEECCSS---SCCCEEEEEEECCCCSSCEECCGGGGGC
T ss_pred CCCHHHHHHHHHHHHhc-CCcc-cccCCCC-CCCCCcCCCcceEeCCCC---CCceEEEEECCCCCccCCcccChhHhCC
Confidence 47788999999999998 5776 7899975 468998 9999997321 12689999999999998 889999999
Q ss_pred CCCCEEeCcC-CCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEe
Q 003847 105 EFLQYLDLSN-NSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVS 183 (791)
Q Consensus 105 ~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~ 183 (791)
++|++|+|++ |.+.+.+|..|.++++|++|+|++|+|++.+|..|.++++|++|+|++|++++.+|..|..+++|++|+
T Consensus 76 ~~L~~L~L~~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~ 155 (313)
T 1ogq_A 76 PYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGIT 155 (313)
T ss_dssp TTCSEEEEEEETTEESCCCGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEE
T ss_pred CCCCeeeCCCCCcccccCChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEE
Confidence 9999999994 889888888888888888888888888888888888888888888888888888888888888888888
Q ss_pred CCCCcCCCCCCCCC---c-ccceeccccccccccCCC-----------------------Cc------------------
Q 003847 184 LKNNYFSDGLPSKF---N-SVQVLDLSSNLINGSLPP-----------------------DI------------------ 218 (791)
Q Consensus 184 L~~N~l~~~~p~~l---~-~L~~L~ls~N~l~~~~p~-----------------------~~------------------ 218 (791)
|++|++++.+|..+ . +|++|+|++|++++.+|. .+
T Consensus 156 L~~N~l~~~~p~~l~~l~~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 235 (313)
T 1ogq_A 156 FDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAF 235 (313)
T ss_dssp CCSSCCEEECCGGGGCCCTTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECC
T ss_pred CcCCcccCcCCHHHhhhhhcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceee
Confidence 88888876666443 2 444444444444433222 11
Q ss_pred -----CC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCCCCCCCCCCC
Q 003847 219 -----GG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCGQPTKNPC 291 (791)
Q Consensus 219 -----~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~c 291 (791)
.. .+|++|+|++|+|+|.+|..+.. +++|++|+|++|+++|.+|....+.++..+.+.+|+++||.|+. .|
T Consensus 236 ~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~-l~~L~~L~Ls~N~l~~~ip~~~~l~~L~~l~l~~N~~lc~~p~~-~C 312 (313)
T 1ogq_A 236 DLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQ-LKFLHSLNVSFNNLCGEIPQGGNLQRFDVSAYANNKCLCGSPLP-AC 312 (313)
T ss_dssp BGGGCCCCTTCCEEECCSSCCEECCCGGGGG-CTTCCEEECCSSEEEEECCCSTTGGGSCGGGTCSSSEEESTTSS-CC
T ss_pred ecCcccccCCCCEEECcCCcccCcCChHHhc-CcCCCEEECcCCcccccCCCCccccccChHHhcCCCCccCCCCC-CC
Confidence 11 36888888888888888988876 99999999999999999999888889999999999999998765 46
No 246
>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A
Probab=100.00 E-value=3.1e-36 Score=317.83 Aligned_cols=223 Identities=12% Similarity=0.100 Sum_probs=178.7
Q ss_pred ceeccccCceEEEEEEeC-CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLE-DGTALAVRRIGENS---VDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++++...+..|+||||+++
T Consensus 36 ~~~lg~G~~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~~~~~~~~lv~e~~~g 115 (286)
T 3uqc_A 36 LIFHGGVPPLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVVHTRAGGLVVAEWIRG 115 (286)
T ss_dssp EEEEEBSTTCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEETTEEEEEEECCCE
T ss_pred EEEEcccCCeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEEEECCcEEEEEEecCC
Confidence 368999999999999964 58999999997652 33457899999999999999999999999999999999999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCcC
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSKA 635 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~ 635 (791)
++|.+++... ....++.+|+.|++.||+|||+.||+||||||+|||++.++.+||+++|
T Consensus 116 ~~L~~~l~~~-------~~~~~~~~i~~ql~~aL~~lH~~givH~Dikp~NIll~~~g~~kl~~~~-------------- 174 (286)
T 3uqc_A 116 GSLQEVADTS-------PSPVGAIRAMQSLAAAADAAHRAGVALSIDHPSRVRVSIDGDVVLAYPA-------------- 174 (286)
T ss_dssp EEHHHHHTTC-------CCHHHHHHHHHHHHHHHHHHHHTTCCCCCCSGGGEEEETTSCEEECSCC--------------
T ss_pred CCHHHHHhcC-------CChHHHHHHHHHHHHHHHHHHHCCCccCCCCcccEEEcCCCCEEEEecc--------------
Confidence 9999998432 3556788999999999999999999999999999999999999998443
Q ss_pred CCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcchhcc
Q 003847 636 GGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVIVVDE 715 (791)
Q Consensus 636 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~pf~~~ 715 (791)
|++| ++.++|||||||++|||+||+.||...
T Consensus 175 ------------------------------------------~~~~-------~~~~~Di~slG~il~elltg~~Pf~~~ 205 (286)
T 3uqc_A 175 ------------------------------------------TMPD-------ANPQDDIRGIGASLYALLVNRWPLPEA 205 (286)
T ss_dssp ------------------------------------------CCTT-------CCHHHHHHHHHHHHHHHHHSEECSCCC
T ss_pred ------------------------------------------ccCC-------CCchhHHHHHHHHHHHHHHCCCCCCcC
Confidence 3433 688999999999999999999999765
Q ss_pred ccCCCC----cchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHHHHHhccCCCC
Q 003847 716 LGQGNG----LLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEALQALEKIPSS 783 (791)
Q Consensus 716 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl~~L~~i~~~ 783 (791)
...... ......... ..... ...+..+.+++.+||+.||++| |+.|+++.|+++...
T Consensus 206 ~~~~~~~~~~~~~~~~~~~----~~~~~------~~~~~~l~~li~~~l~~dP~~R-s~~el~~~L~~~~~~ 266 (286)
T 3uqc_A 206 GVRSGLAPAERDTAGQPIE----PADID------RDIPFQISAVAARSVQGDGGIR-SASTLLNLMQQATAV 266 (286)
T ss_dssp SBCCCSEECCBCTTSCBCC----HHHHC------TTSCHHHHHHHHHHHCTTSSCC-CHHHHHHHHHHHHC-
T ss_pred CcchhhHHHHHHhccCCCC----hhhcc------cCCCHHHHHHHHHHcccCCccC-CHHHHHHHHHHHhcc
Confidence 432211 000000000 00000 1134568899999999999999 999999999886443
No 247
>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*
Probab=100.00 E-value=3.6e-37 Score=354.37 Aligned_cols=255 Identities=20% Similarity=0.241 Sum_probs=193.0
Q ss_pred cceeccccCceEEEEEEe-CCCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEc------cCceEEEE
Q 003847 479 SAYILGASGSSIMYKAVL-EDGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWG------VDEKLIIY 550 (791)
Q Consensus 479 ~~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~------~~~~~lv~ 550 (791)
..+.||+|+||.||+|.. .+|+.||||++... .....+.+.+|++++++++||||+++++++.. .+..++||
T Consensus 18 i~~~LG~G~fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~~~~~~~~~~~LVm 97 (676)
T 3qa8_A 18 MKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAM 97 (676)
T ss_dssp CCCCCCBCSSSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTTCCCCTTSSCCCEE
T ss_pred EEEEEeeCCCeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeecccccccCCCeEEEEE
Confidence 346899999999999995 56899999999764 44445779999999999999999999998765 66779999
Q ss_pred eccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCC---eEEeccCcccccC
Q 003847 551 DFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDME---PKIGDFGLERLVT 627 (791)
Q Consensus 551 e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~---~kL~DFGla~~~~ 627 (791)
||+++|+|.+++....... .+++..++.|+.|++.||+|||+.||+||||||+||+++.++. +||+|||++....
T Consensus 98 Ey~~ggsL~~~L~~~~~~~--~lse~~i~~I~~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~ 175 (676)
T 3qa8_A 98 EYCEGGDLRKYLNQFENCC--GLKEGPIRTLLSDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELD 175 (676)
T ss_dssp ECCSSCBHHHHHHSSSCTT--CCCSSHHHHHHHHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTT
T ss_pred EeCCCCCHHHHHHhcccCC--CCCHHHHHHHHHHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccc
Confidence 9999999999988754322 3889999999999999999999999999999999999997665 8999999998654
Q ss_pred CCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHh
Q 003847 628 GDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLT 707 (791)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~ellt 707 (791)
.... .....||+.|+|||++.+..++.++|||||||++|||++
T Consensus 176 ~~~~-------------------------------------~~~~~gt~~Y~APE~l~~~~~s~ksDIwSLGviLyeLlt 218 (676)
T 3qa8_A 176 QGEL-------------------------------------CTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECIT 218 (676)
T ss_dssp SCCC-------------------------------------CCCCCSCCTTCSSCSSCCSCCSTTHHHHHHHHHHHHHHS
T ss_pred cccc-------------------------------------cccccCCcccCChHHhccCCCCchhHHHHHHHHHHHHHH
Confidence 2211 123458999999999999999999999999999999999
Q ss_pred CCcchhcccc--CCCCcchhchhHHHHHHHH----------hhhcCccchHHHHHHHHHHHhhccCCCCCCCCCHHHH
Q 003847 708 GKVIVVDELG--QGNGLLVEDKNRAIRLADA----------AIRADFEGKEEALLSCFKLGYSCASPLPQKRPSMKEA 773 (791)
Q Consensus 708 G~~pf~~~~~--~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~ev 773 (791)
|+.||..... .|.......... ...... ...............+.+++.+||..||++|||+.|+
T Consensus 219 G~~Pf~~~~~~~~~~~~i~~~~~~-~~~~~~~l~g~~~~~~~lp~p~~l~~~ls~~L~dLI~~mL~~DP~kRPTa~el 295 (676)
T 3qa8_A 219 GFRPFLPNWQPVQWHGKVREKSNE-HIVVYDDLTGAVKFSSVLPTPNHLSGILAGKLERWLQCMLMWHQRQRGTDPQN 295 (676)
T ss_dssp SCSSCCSSCHHHHSSTTCC-------CCSCCCCSSSCCCCSSSCCSCCCCGGGHHHHHHHHHHHSCSSCC---CCTTC
T ss_pred CCCCCCcccchhhhhhhhhcccch-hhhhhhhhccccccccccCCchhhchhhhHHHHHHHHHHccCCHhhCcCHHHH
Confidence 9999854211 111111000000 000000 0000001122256788999999999999999999773
No 248
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=100.00 E-value=7.1e-36 Score=353.26 Aligned_cols=232 Identities=22% Similarity=0.299 Sum_probs=187.3
Q ss_pred ceeccccCceEEEEEEeC--CCcEEEEEEcCCC-chhhHHHHHHHHHHHhccCCCCccceeeEEEccCc-----eEEEEe
Q 003847 480 AYILGASGSSIMYKAVLE--DGTALAVRRIGEN-SVDRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDE-----KLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~--~g~~vavK~~~~~-~~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~-----~~lv~e 551 (791)
...||+|+||.||+|... +|+.||||++... .....+.+.+|++++++++||||+++++++...+. .|+|||
T Consensus 85 ~~~lg~G~~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~~~~~~lv~E 164 (681)
T 2pzi_A 85 KGCIAHGGLGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTDRHGDPVGYIVME 164 (681)
T ss_dssp EEEEEEETTEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEECTTSCEEEEEEEE
T ss_pred EEEEeeCCCeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecCCCCCceeEEEEE
Confidence 468999999999999964 6899999998654 33445678999999999999999999999988766 699999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++++|.+++.. .+++.+++.|+.||+.||+|||+.||+||||||+|||++.+ .+||+|||+++.....
T Consensus 165 ~~~g~~L~~~~~~-------~l~~~~~~~~~~qi~~aL~~lH~~giiHrDlkp~NIll~~~-~~kl~DFG~a~~~~~~-- 234 (681)
T 2pzi_A 165 YVGGQSLKRSKGQ-------KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPENIMLTEE-QLKLIDLGAVSRINSF-- 234 (681)
T ss_dssp CCCCEECC----C-------CCCHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEECSS-CEEECCCTTCEETTCC--
T ss_pred eCCCCcHHHHHhC-------CCCHHHHHHHHHHHHHHHHHHHHCCCeecccChHHeEEeCC-cEEEEecccchhcccC--
Confidence 9999999887643 39999999999999999999999999999999999999885 8999999999865421
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCcc
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKVI 711 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~p 711 (791)
....||+.|+|||++.+. ++.++|||||||++|||++|..|
T Consensus 235 --------------------------------------~~~~gt~~y~aPE~~~~~-~~~~sDi~slG~~l~~l~~g~~~ 275 (681)
T 2pzi_A 235 --------------------------------------GYLYGTPGFQAPEIVRTG-PTVATDIYTVGRTLAALTLDLPT 275 (681)
T ss_dssp --------------------------------------SCCCCCTTTSCTTHHHHC-SCHHHHHHHHHHHHHHHHSCCCE
T ss_pred --------------------------------------CccCCCccccCHHHHcCC-CCCceehhhhHHHHHHHHhCCCC
Confidence 123589999999998764 48999999999999999999998
Q ss_pred hhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHHhhccCCCCCCCCC-HHHHHHHhcc
Q 003847 712 VVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLGYSCASPLPQKRPS-MKEALQALEK 779 (791)
Q Consensus 712 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~cl~~dP~~RPs-~~evl~~L~~ 779 (791)
|......... .. .........+.+++.+||+.||++||+ ++++...|..
T Consensus 276 ~~~~~~~~~~----~~---------------~~~~~~~~~l~~li~~~l~~dP~~R~~~~~~l~~~l~~ 325 (681)
T 2pzi_A 276 RNGRYVDGLP----ED---------------DPVLKTYDSYGRLLRRAIDPDPRQRFTTAEEMSAQLTG 325 (681)
T ss_dssp ETTEECSSCC----TT---------------CHHHHHCHHHHHHHHHHTCSSGGGSCSSHHHHHHHHHH
T ss_pred Cccccccccc----cc---------------ccccccCHHHHHHHhhhccCChhhCCCHHHHHHHHHHH
Confidence 8654322111 00 001113456789999999999999995 5666665544
No 249
>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*
Probab=100.00 E-value=1.2e-35 Score=315.79 Aligned_cols=222 Identities=19% Similarity=0.252 Sum_probs=174.7
Q ss_pred ceeccccCceEEEEEEe-CCCcEEEEEEcCCCchhhHHHHHHHHHHH-hccCCCCccceeeEEEc----cCceEEEEecc
Q 003847 480 AYILGASGSSIMYKAVL-EDGTALAVRRIGENSVDRFRDFETQVRVI-AKLVHPNLVRIRGFYWG----VDEKLIIYDFV 553 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~vavK~~~~~~~~~~~~~~~E~~~l-~~l~H~nIv~l~~~~~~----~~~~~lv~e~~ 553 (791)
.++||+|+||.||+|.. .+++.||||++... ..+.+|++++ +..+||||+++++++.. ....++||||+
T Consensus 23 ~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~-----~~~~~e~~~~~~~~~h~~i~~~~~~~~~~~~~~~~~~lv~e~~ 97 (299)
T 3m2w_A 23 SQVLGLGINGKVLQIFNKRTQEKFALKMLQDC-----PKARREVELHWRASQCPHIVRIVDVYENLYAGRKCLLIVMECL 97 (299)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEEECS-----HHHHHHHHHHHHHTTSTTBCCEEEEEEEEETTEEEEEEEECCC
T ss_pred CcccccCCCeEEEEEEEcCCCcEEEEEEeccc-----HHHHHHHHHHHHhccCCCchhHHhhhhhhcCCCceEEEEEeec
Confidence 36799999999999995 57899999998643 4567888888 55689999999999987 66789999999
Q ss_pred CCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecC---CCCeEEeccCcccccCCCC
Q 003847 554 PNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGN---DMEPKIGDFGLERLVTGDT 630 (791)
Q Consensus 554 ~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~---~~~~kL~DFGla~~~~~~~ 630 (791)
++|+|.+++...... .+++..++.++.|++.||+|||+.||+||||||+||+++. ++.+||+|||++....
T Consensus 98 ~~~~L~~~l~~~~~~---~~~~~~~~~i~~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~--- 171 (299)
T 3m2w_A 98 DGGELFSRIQDRGDQ---AFTEREASEIMKSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETT--- 171 (299)
T ss_dssp CSCBHHHHHHHCTTC---CCBHHHHHHHHHHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECT---
T ss_pred CCCcHHHHHHhccCC---CCCHHHHHHHHHHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEeccccccccc---
Confidence 999999999875432 4999999999999999999999999999999999999998 7889999999987532
Q ss_pred CCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCCc
Q 003847 631 SSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGKV 710 (791)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~~ 710 (791)
+..++.++|||||||++|||++|+.
T Consensus 172 -------------------------------------------------------~~~~~~~~DiwslG~il~el~tg~~ 196 (299)
T 3m2w_A 172 -------------------------------------------------------GEKYDKSCDMWSLGVIMYILLCGYP 196 (299)
T ss_dssp -------------------------------------------------------TCGGGGHHHHHHHHHHHHHHHHSSC
T ss_pred -------------------------------------------------------cccCCchhhHHHHHHHHHHHHHCCC
Confidence 1235789999999999999999999
Q ss_pred chhccccCCCCcchhchhHHHHHHHHhhhcCccch----HHHHHHHHHHHhhccCCCCCCCCCHHHHHHH
Q 003847 711 IVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGK----EEALLSCFKLGYSCASPLPQKRPSMKEALQA 776 (791)
Q Consensus 711 pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~l~~li~~cl~~dP~~RPs~~evl~~ 776 (791)
||............... ......... ...+..+.+++.+||+.||++|||+.|+++.
T Consensus 197 pf~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rps~~e~l~h 257 (299)
T 3m2w_A 197 PFYSNHGLAISPGMKTR---------IRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNH 257 (299)
T ss_dssp SCCC-------CCSCCS---------SCTTCCSSCHHHHTTSCHHHHHHHHHHTCSSTTTSCCHHHHHTS
T ss_pred CCCCCcchhhhHHHHHH---------HhhccccCCchhcccCCHHHHHHHHHHcccChhhCCCHHHHhcC
Confidence 99654321111000000 000000000 1235678899999999999999999999973
No 250
>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=4.4e-36 Score=333.69 Aligned_cols=238 Identities=17% Similarity=0.152 Sum_probs=176.3
Q ss_pred ceeccccCceEEEEEE-eCCCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccCC-CCccce---------eeE------
Q 003847 480 AYILGASGSSIMYKAV-LEDGTALAVRRIGENS---VDRFRDFETQVRVIAKLVH-PNLVRI---------RGF------ 539 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~H-~nIv~l---------~~~------ 539 (791)
.++||+|+||.||+|+ ..+|+.||||++.... ....+.+.+|+.+++.++| +|.... .+.
T Consensus 83 ~~~LG~G~fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (413)
T 3dzo_A 83 GTVLGQEDPYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQK 162 (413)
T ss_dssp EEEEEEETTEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC-
T ss_pred ecccccCCCEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCC
Confidence 4689999999999999 5679999999997432 2235789999999999987 322111 111
Q ss_pred ------EEc-----cCceEEEEeccCCCChhHHHHhhc--CCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCC
Q 003847 540 ------YWG-----VDEKLIIYDFVPNGSLANARYRKM--GSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRN 606 (791)
Q Consensus 540 ------~~~-----~~~~~lv~e~~~~gsL~~~l~~~~--~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~N 606 (791)
+.. ....+++|+++ +++|.+++.... ......+++..++.|+.||+.||+|||++||+||||||+|
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH~~~iiHrDiKp~N 241 (413)
T 3dzo_A 163 KKMIRVRLDERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLTLQVIRLLASLHHYGLVHTYLRPVD 241 (413)
T ss_dssp --------------CCSEEEEEECC-SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHTTEECSCCCGGG
T ss_pred CccccccCCCccccccceEEEeehh-cCCHHHHHHHhhcccccCCCCCHHHHHHHHHHHHHHHHHHHhCCcccCCcccce
Confidence 111 12456777766 689999885321 1111247888999999999999999999999999999999
Q ss_pred eEecCCCCeEEeccCcccccCCCCCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccc--
Q 003847 607 VLLGNDMEPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESL-- 684 (791)
Q Consensus 607 ILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~-- 684 (791)
||++.++.+||+|||+++..... ....+| +.|+|||++
T Consensus 242 ILl~~~~~~kL~DFG~a~~~~~~---------------------------------------~~~~~g-~~y~aPE~~~~ 281 (413)
T 3dzo_A 242 IVLDQRGGVFLTGFEHLVRDGAS---------------------------------------AVSPIG-RGFAPPETTAE 281 (413)
T ss_dssp EEECTTCCEEECCGGGCEETTEE---------------------------------------ECCCCC-TTTCCHHHHHH
T ss_pred EEEecCCeEEEEeccceeecCCc---------------------------------------cccCCC-CceeCchhhhc
Confidence 99999999999999998865321 112347 889999999
Q ss_pred --------cCCCCCCchhhHHHHHHHHHHHhCCcchhccccCCCCcchhchhHHHHHHHHhhhcCccchHHHHHHHHHHH
Q 003847 685 --------RSIKPNPKWDVYSFGVILLELLTGKVIVVDELGQGNGLLVEDKNRAIRLADAAIRADFEGKEEALLSCFKLG 756 (791)
Q Consensus 685 --------~~~~~~~~sDvwSlGvil~elltG~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li 756 (791)
.+..++.++|||||||++|||++|+.||........... .+.... ..+..+.+|+
T Consensus 282 ~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~~~~~~~~~-------------~~~~~~----~~~~~~~~li 344 (413)
T 3dzo_A 282 RMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDDAALGGSEW-------------IFRSCK----NIPQPVRALL 344 (413)
T ss_dssp HTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTTGGGSCSGG-------------GGSSCC----CCCHHHHHHH
T ss_pred cccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCcchhhhHHH-------------HHhhcc----cCCHHHHHHH
Confidence 556688899999999999999999999966432221111 111111 1345688999
Q ss_pred hhccCCCCCCCCCHHHHHH
Q 003847 757 YSCASPLPQKRPSMKEALQ 775 (791)
Q Consensus 757 ~~cl~~dP~~RPs~~evl~ 775 (791)
.+||+.||++||++.|+++
T Consensus 345 ~~~l~~dP~~Rpt~~~~l~ 363 (413)
T 3dzo_A 345 EGFLRYPKEDRLLPLQAME 363 (413)
T ss_dssp HHHTCSSGGGSCCHHHHTT
T ss_pred HHHccCChhhCcCHHHHHh
Confidence 9999999999999877753
No 251
>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A
Probab=100.00 E-value=1e-35 Score=321.83 Aligned_cols=235 Identities=13% Similarity=0.086 Sum_probs=178.8
Q ss_pred hcceeccccCceEEEEEEeCCCcEEEEEEcCCCc--------hhhHHHHHHHHHHHhccC---------CCCccceeeEE
Q 003847 478 ASAYILGASGSSIMYKAVLEDGTALAVRRIGENS--------VDRFRDFETQVRVIAKLV---------HPNLVRIRGFY 540 (791)
Q Consensus 478 ~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~--------~~~~~~~~~E~~~l~~l~---------H~nIv~l~~~~ 540 (791)
...+.||+|+||.||+|+. +|+.||||++.... ....+.+.+|++++++++ ||||+++.+++
T Consensus 23 ~~~~~lG~G~~g~V~~~~~-~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~ 101 (336)
T 2vuw_A 23 QRCEKIGEGVFGEVFQTIA-DHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVH 101 (336)
T ss_dssp HTCEEEEEETTEEEEEEEE-TTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEE
T ss_pred hheeeecccCceEEEEEEe-CCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhccee
Confidence 3457899999999999998 68999999997542 223477899999998886 66666665553
Q ss_pred -----------------Ec-------------cCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHH
Q 003847 541 -----------------WG-------------VDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLA 590 (791)
Q Consensus 541 -----------------~~-------------~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~ 590 (791)
.+ .+..|+||||+++|++.+.+... .+++..++.|+.||+.||+
T Consensus 102 ~~~~~~hp~iv~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~------~~~~~~~~~i~~qi~~aL~ 175 (336)
T 2vuw_A 102 CVQGSYPPLLLKAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTK------LSSLATAKSILHQLTASLA 175 (336)
T ss_dssp EEESSCCHHHHHHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTT------CCCHHHHHHHHHHHHHHHH
T ss_pred EecCCCcHHHHHHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhc------CCCHHHHHHHHHHHHHHHH
Confidence 32 67899999999999776665331 3899999999999999999
Q ss_pred HHh-cCCCeecCCCCCCeEecCCC--------------------CeEEeccCcccccCCCCCCCcCCCCccccCCccccc
Q 003847 591 FLH-EKKHVHGNLKPRNVLLGNDM--------------------EPKIGDFGLERLVTGDTSSSKAGGSARNFGSKRSTA 649 (791)
Q Consensus 591 yLH-~~~ivHrDlkp~NILl~~~~--------------------~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (791)
||| +.||+||||||+|||++.++ .+||+|||+|+.....
T Consensus 176 ~lH~~~~ivHrDlKp~NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~-------------------- 235 (336)
T 2vuw_A 176 VAEASLRFEHRDLHWGNVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDG-------------------- 235 (336)
T ss_dssp HHHHHHCCBCSCCCGGGEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETT--------------------
T ss_pred HHHHhCCEeECCCCHHHEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCC--------------------
Confidence 999 89999999999999999887 8999999999876421
Q ss_pred ccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHH-HHHHHhCCcchhccccCCCCcchhchh
Q 003847 650 SRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVI-LLELLTGKVIVVDELGQGNGLLVEDKN 728 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvi-l~elltG~~pf~~~~~~~~~~~~~~~~ 728 (791)
..+||+.|+|||++.+.. +.++||||+|++ .+++++|..||.+.. ....
T Consensus 236 ---------------------~~~gt~~y~aPE~~~g~~-~~~~Diwsl~~~~~~~~~~g~~p~~~~~--------~~~~ 285 (336)
T 2vuw_A 236 ---------------------IVVFCDVSMDEDLFTGDG-DYQFDIYRLMKKENNNRWGEYHPYSNVL--------WLHY 285 (336)
T ss_dssp ---------------------EEECCCCTTCSGGGCCCS-SHHHHHHHHHHHHHTTCTTSCCTHHHHH--------HHHH
T ss_pred ---------------------cEEEeecccChhhhcCCC-ccceehhhhhCCCCcccccccCCCcchh--------hhhH
Confidence 124899999999998766 899999998777 788899999985420 0000
Q ss_pred HHHHHHHHhhhc---CccchHHHHHHHHHHHhhccCCCCCCCCCHHHHH
Q 003847 729 RAIRLADAAIRA---DFEGKEEALLSCFKLGYSCASPLPQKRPSMKEAL 774 (791)
Q Consensus 729 ~~~~~~~~~~~~---~~~~~~~~~~~l~~li~~cl~~dP~~RPs~~evl 774 (791)
....+....... ........+.++.+|+.+||+.| |++|++
T Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dli~~~L~~d-----sa~e~l 329 (336)
T 2vuw_A 286 LTDKMLKQMTFKTKCNTPAMKQIKRKIQEFHRTMLNFS-----SATDLL 329 (336)
T ss_dssp HHHHHHHTCCCSSCCCSHHHHHHHHHHHHHHHHGGGSS-----SHHHHH
T ss_pred HHHhhhhhhccCcccchhhhhhcCHHHHHHHHHHhccC-----CHHHHH
Confidence 011111110011 11123346788999999999876 999998
No 252
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.97 E-value=1.8e-30 Score=311.57 Aligned_cols=241 Identities=28% Similarity=0.403 Sum_probs=204.6
Q ss_pred ccCCChhhHHHHHHHHhhccCCCCCccCCCCCCCCCCceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccC---CC-----
Q 003847 27 QSLGLNTDGVLLLSFKYSVLSDPLGVLGSWNYNDENPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGS---IP----- 98 (791)
Q Consensus 27 ~~~~~~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~---~~----- 98 (791)
++.+.++|+.||++||+++. ||. .+++|+ .+.+||.|.||+|+ .++|+.|+|+++++.|. +|
T Consensus 6 ~~~~~~~~~~all~~k~~~~-~~~-~l~~W~-~~~~~C~w~gv~C~-------~~~v~~L~L~~~~l~g~~~~l~~~l~~ 75 (768)
T 3rgz_A 6 PSQSLYREIHQLISFKDVLP-DKN-LLPDWS-SNKNPCTFDGVTCR-------DDKVTSIDLSSKPLNVGFSAVSSSLLS 75 (768)
T ss_dssp --CCHHHHHHHHHHHHTTCS-CTT-SSTTCC-TTSCGGGSTTEEEE-------TTEEEEEECTTSCCCEEHHHHHHHTTT
T ss_pred cccCCHHHHHHHHHHHhhCC-Ccc-cccCCC-CCCCCcCCcceEEC-------CCcEEEEECCCCCcCCccCccChhHhc
Confidence 34567789999999999985 887 899998 45689999999997 47999999999999886 43
Q ss_pred ------------------cCCCCCCCCCEEeCcCCCCCCCCcc--cccCCCCccEEEccCCcCCCCCcccc-CCCCCCCE
Q 003847 99 ------------------ADLGMIEFLQYLDLSNNSLNGSLSF--SLFNASQLRNLDLSNNLISGHLPETM-GSLHNLQL 157 (791)
Q Consensus 99 ------------------~~~~~l~~L~~L~L~~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~ 157 (791)
..|+.+++|++|+|++|.|+|.+|. .++++++|++|+|++|.+++.+|..+ .++++|++
T Consensus 76 L~~L~~l~~~~~~~~~l~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~ 155 (768)
T 3rgz_A 76 LTGLESLFLSNSHINGSVSGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSSNTLDFPGKVSGGLKLNSLEV 155 (768)
T ss_dssp CTTCCEEECTTSCEEECCCCCCCCTTCCEEECCSSEEEEEGGGGGGGGGCTTCCEEECCSSEEECCSSCCSCCCCTTCSE
T ss_pred cCcccccCCcCCCcCCCchhhccCCCCCEEECCCCcCCCcCCChHHHhCCCCCCEEECcCCccCCcCCHHHhccCCCCCE
Confidence 5788888999999999999888888 88899999999999999988888776 78899999
Q ss_pred EeCcCCcCCCCCccc---cCCCCCCCEEeCCCCcCCCCCCC-CCcccceeccccccccccCCCCcCC-ccccEEEccCCc
Q 003847 158 LNLSDNALAGKLPVS---LTTLQSLTIVSLKNNYFSDGLPS-KFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNR 232 (791)
Q Consensus 158 L~ls~N~l~~~~p~~---~~~l~~L~~L~L~~N~l~~~~p~-~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~ 232 (791)
|+|++|++++..|.. +.++++|++|+|++|++++.+|. .+++|++|+|++|++++.+|. ++. .+|++|+|++|+
T Consensus 156 L~Ls~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~l~~L~~L~Ls~n~l~~~~~~-l~~l~~L~~L~Ls~n~ 234 (768)
T 3rgz_A 156 LDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDVDVSRCVNLEFLDVSSNNFSTGIPF-LGDCSALQHLDISGNK 234 (768)
T ss_dssp EECCSSCCEEETHHHHHHTTCCTTCCEEECCSSEEESCCBCTTCTTCCEEECCSSCCCSCCCB-CTTCCSCCEEECCSSC
T ss_pred EECCCCccCCcCChhhhhhccCCCCCEEECCCCcccccCCcccCCcCCEEECcCCcCCCCCcc-cccCCCCCEEECcCCc
Confidence 999999998888877 78899999999999998886664 568999999999999988887 665 589999999999
Q ss_pred CcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCC
Q 003847 233 LSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNL 280 (791)
Q Consensus 233 l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 280 (791)
+++.+|..+.. +++|++|+|++|++++.+|.. .+.+++.+.+.+|.
T Consensus 235 l~~~~~~~l~~-l~~L~~L~Ls~n~l~~~~~~~-~l~~L~~L~L~~n~ 280 (768)
T 3rgz_A 235 LSGDFSRAIST-CTELKLLNISSNQFVGPIPPL-PLKSLQYLSLAENK 280 (768)
T ss_dssp CCSCHHHHTTT-CSSCCEEECCSSCCEESCCCC-CCTTCCEEECCSSE
T ss_pred CCCcccHHHhc-CCCCCEEECCCCcccCccCcc-ccCCCCEEECcCCc
Confidence 99888888876 999999999999999888876 56666777776664
No 253
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.97 E-value=2.2e-31 Score=306.17 Aligned_cols=186 Identities=15% Similarity=0.066 Sum_probs=132.7
Q ss_pred eccccCceEEEEEE-eCCCcEEEEEEcCCC----------chhhHHHHHHHHHHHhcc-CCCCccceeeEEEccCceEEE
Q 003847 482 ILGASGSSIMYKAV-LEDGTALAVRRIGEN----------SVDRFRDFETQVRVIAKL-VHPNLVRIRGFYWGVDEKLII 549 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~-~~~g~~vavK~~~~~----------~~~~~~~~~~E~~~l~~l-~H~nIv~l~~~~~~~~~~~lv 549 (791)
-.+.|+.|.++.++ ...|+.||||++... .....++|.+|+++|+++ .|+||+++++++++++..|||
T Consensus 241 ~~~~~~~~~h~~~rr~~fg~~~~~K~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~ed~~~~yLV 320 (569)
T 4azs_A 241 QPYAGAGLAHKRSRRYFFGEDYVCKFFYYDMPHGILTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLV 320 (569)
T ss_dssp C-C--------CCEEEEECSSEEEEEEESSCSTTCSCHHHHHHHHHHHHHHHHHHHSCCTTCCCCCEEEEEECSSEEEEE
T ss_pred ccccCCcccccccccccccceeEEEEEecccccccchhhhhHHHHHHHHHHHHHHHhcCCCCCeeEEEEEEEECCEEEEE
Confidence 35667777777765 446899999999653 122346799999999999 799999999999999999999
Q ss_pred EeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCC
Q 003847 550 YDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGD 629 (791)
Q Consensus 550 ~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~ 629 (791)
|||++|++|.+++.... +++.. +|+.||+.||+|+|++|||||||||+|||++.+|.+||+|||+|+.....
T Consensus 321 MEyv~G~~L~d~i~~~~-----~l~~~---~I~~QIl~AL~ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~ 392 (569)
T 4azs_A 321 MEKLPGRLLSDMLAAGE-----EIDRE---KILGSLLRSLAALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQD 392 (569)
T ss_dssp EECCCSEEHHHHHHTTC-----CCCHH---HHHHHHHHHHHHHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC--
T ss_pred EecCCCCcHHHHHHhCC-----CCCHH---HHHHHHHHHHHHHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCC
Confidence 99999999999997653 26553 58999999999999999999999999999999999999999999866432
Q ss_pred CCCCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhCC
Q 003847 630 TSSSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG~ 709 (791)
.. .....+||+.|||||++.+ .+..++|+||+|++++++.++.
T Consensus 393 ~~------------------------------------~~~t~vGTp~YmAPE~l~g-~~~~~~d~~s~g~~~~~l~~~~ 435 (569)
T 4azs_A 393 CS------------------------------------WPTNLVQSFFVFVNELFAE-NKSWNGFWRSAPVHPFNLPQPW 435 (569)
T ss_dssp -C------------------------------------CSHHHHHHHHHHHHHHC------------------CCCCTTH
T ss_pred Cc------------------------------------cccCceechhhccHHHhCC-CCCCcccccccccchhhhcccc
Confidence 11 1224569999999999986 4678899999999999988877
Q ss_pred cch
Q 003847 710 VIV 712 (791)
Q Consensus 710 ~pf 712 (791)
.++
T Consensus 436 ~~~ 438 (569)
T 4azs_A 436 SNW 438 (569)
T ss_dssp HHH
T ss_pred chh
Confidence 665
No 254
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.96 E-value=3.2e-30 Score=277.32 Aligned_cols=250 Identities=20% Similarity=0.244 Sum_probs=208.6
Q ss_pred ccCCChhhHHHHHHHHhhccCCCCCccCCCC---CCCCCCceeeeeeeCCCCC---CCCCCcEEEEEcCCCCCccCCCcC
Q 003847 27 QSLGLNTDGVLLLSFKYSVLSDPLGVLGSWN---YNDENPCSWNGVTCASPGE---GNNDSRVIGLALPNSQLLGSIPAD 100 (791)
Q Consensus 27 ~~~~~~~~~~~ll~~k~~~~~~~~~~l~sw~---~~~~~~c~w~gv~C~~~~~---~~~~~~v~~L~L~~~~l~~~~~~~ 100 (791)
...+..+|..||++||..+..|+.+.+++|. ....++|.|.|+.|..... .....+|+.|+|++|++. .+|..
T Consensus 21 ~~~~~~~~~~aLl~~k~~~~~~~~~~~~~w~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~l~~L~L~~n~l~-~lp~~ 99 (328)
T 4fcg_A 21 GSTALRPYHDVLSQWQRHYNADRNRWHSAWRQANSNNPQIETRTGRALKATADLLEDATQPGRVALELRSVPLP-QFPDQ 99 (328)
T ss_dssp --CCCCCHHHHHHHHHHHHHHCCTTHHHHHHHHTTTCTTSCCSHHHHHHHHHHHHHHHTSTTCCEEEEESSCCS-SCCSC
T ss_pred ccccCchHHHHHHHHHHhccCCchhhhhhhcccccccccccccCCcchhhhHHHHhcccccceeEEEccCCCch-hcChh
Confidence 4457778999999999998888988889994 4456889999999951000 012468999999999998 77888
Q ss_pred CCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCC-----
Q 003847 101 LGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTT----- 175 (791)
Q Consensus 101 ~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~----- 175 (791)
++.+++|++|+|++|.|+ .+|..|.++++|++|+|++|+|+ .+|..|+++++|++|+|++|++.+.+|..+..
T Consensus 100 l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~~~~ 177 (328)
T 4fcg_A 100 AFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTDASG 177 (328)
T ss_dssp GGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC-CC
T ss_pred hhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhccchh
Confidence 999999999999999999 88999999999999999999999 88999999999999999999988899987764
Q ss_pred ----CCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCC
Q 003847 176 ----LQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPV 247 (791)
Q Consensus 176 ----l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~ 247 (791)
+++|++|+|++|+|+ .+|..+ ++|++|+|++|+|++ +|..+.. .+|++|+|++|.+.+.+|..+.. +++
T Consensus 178 ~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~-l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~-l~~ 254 (328)
T 4fcg_A 178 EHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSA-LGPAIHHLPKLEELDLRGCTALRNYPPIFGG-RAP 254 (328)
T ss_dssp CEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCC-CCGGGGGCTTCCEEECTTCTTCCBCCCCTTC-CCC
T ss_pred hhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCc-CchhhccCCCCCEEECcCCcchhhhHHHhcC-CCC
Confidence 999999999999998 566654 789999999999985 5656665 58999999999999899988876 999
Q ss_pred CcEEEcccCcCcccCCCCC-cccccccccccCCCCC
Q 003847 248 NATIDLSFNNLTGEIPESN-VFMNQESSSFSGNLDL 282 (791)
Q Consensus 248 l~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n~~l 282 (791)
|++|+|++|++.+.+|... .+.++..+.+.+|+..
T Consensus 255 L~~L~L~~n~~~~~~p~~~~~l~~L~~L~L~~n~~~ 290 (328)
T 4fcg_A 255 LKRLILKDCSNLLTLPLDIHRLTQLEKLDLRGCVNL 290 (328)
T ss_dssp CCEEECTTCTTCCBCCTTGGGCTTCCEEECTTCTTC
T ss_pred CCEEECCCCCchhhcchhhhcCCCCCEEeCCCCCch
Confidence 9999999999999998763 4556667777776543
No 255
>3rgz_A Protein brassinosteroid insensitive 1; phytohormone, leucine-rich RE receptor-like kinases, leucine-rich repeat; HET: NAG BLD; 2.28A {Arabidopsis thaliana} PDB: 3rgx_A* 3riz_A* 3rj0_A*
Probab=99.96 E-value=1e-29 Score=304.98 Aligned_cols=215 Identities=33% Similarity=0.514 Sum_probs=182.0
Q ss_pred CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCC
Q 003847 77 GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQ 156 (791)
Q Consensus 77 ~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 156 (791)
+....+++.|+|++|++++.+|..|+.+++|++|+|++|++++.+|..|+++++|++|+|++|+++|.+|..++++++|+
T Consensus 462 ~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~~L~ 541 (768)
T 3rgz_A 462 LMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLI 541 (768)
T ss_dssp GGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEEECCGGGGGCTTCC
T ss_pred HcCCCCceEEEecCCcccCcCCHHHhcCCCCCEEEccCCccCCcCChHHhcCCCCCEEECCCCcccCcCCHHHcCCCCCC
Confidence 34456777777777887777777788888888888888888878888888888888888888888888888888888888
Q ss_pred EEeCcCCcCCCCCcccc---------------------------------------------------------------
Q 003847 157 LLNLSDNALAGKLPVSL--------------------------------------------------------------- 173 (791)
Q Consensus 157 ~L~ls~N~l~~~~p~~~--------------------------------------------------------------- 173 (791)
.|+|++|+++|.+|..+
T Consensus 542 ~L~Ls~N~l~g~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~ 621 (768)
T 3rgz_A 542 WLDLNTNLFNGTIPAAMFKQSGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYG 621 (768)
T ss_dssp EEECCSSEEESBCCGGGGTTTTCBCCSTTCSCEEEEEECCSCCTTCCSSEEEEECTTCCGGGGGGGGGTCCSCTTSCEEE
T ss_pred EEECCCCccCCcCChHHhcccchhhhhccccccccccccccccccccccccccccccccchhhhccccccccccccceec
Confidence 88888888877666533
Q ss_pred -------CCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHh
Q 003847 174 -------TTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFG 242 (791)
Q Consensus 174 -------~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~ 242 (791)
..+++|+.|+|++|+|+|.+|..+ ++|+.|+|++|+|+|.+|..++. .+|++|||++|+|+|.+|..+.
T Consensus 622 g~~~~~~~~l~~L~~LdLs~N~l~g~ip~~l~~l~~L~~L~Ls~N~l~g~ip~~l~~L~~L~~LdLs~N~l~g~ip~~l~ 701 (768)
T 3rgz_A 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMS 701 (768)
T ss_dssp EECCCSCSSSBCCCEEECCSSCCBSCCCGGGGGCTTCCEEECCSSCCCSCCCGGGGGCTTCCEEECCSSCCEECCCGGGG
T ss_pred ccCchhhhccccccEEECcCCcccccCCHHHhccccCCEEeCcCCccCCCCChHHhCCCCCCEEECCCCcccCcCChHHh
Confidence 335678889999999998888766 67899999999999999999988 5899999999999999999998
Q ss_pred hcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCCCCCCCCCCCCC
Q 003847 243 EKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCGQPTKNPCPI 293 (791)
Q Consensus 243 ~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~c~~ 293 (791)
. +++|++|||++|+|+|.+|+...+..+....|.||+++||.|+. +|..
T Consensus 702 ~-l~~L~~L~ls~N~l~g~iP~~~~~~~~~~~~~~gN~~Lcg~~l~-~C~~ 750 (768)
T 3rgz_A 702 A-LTMLTEIDLSNNNLSGPIPEMGQFETFPPAKFLNNPGLCGYPLP-RCDP 750 (768)
T ss_dssp G-CCCCSEEECCSSEEEEECCSSSSGGGSCGGGGCSCTEEESTTSC-CCCS
T ss_pred C-CCCCCEEECcCCcccccCCCchhhccCCHHHhcCCchhcCCCCc-CCCC
Confidence 7 99999999999999999999999999999999999999999887 7854
No 256
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.96 E-value=9e-30 Score=298.62 Aligned_cols=240 Identities=24% Similarity=0.391 Sum_probs=207.1
Q ss_pred CChhhHHHHHHHHhhccCCCCCc-------cCCCCCCCCCCcee---eeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCc
Q 003847 30 GLNTDGVLLLSFKYSVLSDPLGV-------LGSWNYNDENPCSW---NGVTCASPGEGNNDSRVIGLALPNSQLLGSIPA 99 (791)
Q Consensus 30 ~~~~~~~~ll~~k~~~~~~~~~~-------l~sw~~~~~~~c~w---~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~ 99 (791)
....|..||.+++.++..+.+.. ..+|+. +.+||.| .||+|+. .++|+.|+|+++++.|.+|+
T Consensus 27 ~~~~d~~aL~~~~~~~~~~~w~~~~~~~~~~~~W~~-~~~~c~w~~~~GV~C~~------~~~V~~L~L~~~~l~g~lp~ 99 (636)
T 4eco_A 27 EYIKDYLALKEIWDALNGKNWSQQGFGTQPGANWNF-NKELDMWGAQPGVSLNS------NGRVTGLSLEGFGASGRVPD 99 (636)
T ss_dssp HHHHHHHHHHHHHHHTTGGGCCCCC------CCCCC-SSCGGGTTCCTTEEECT------TCCEEEEECTTSCCEEEECG
T ss_pred hHHHHHHHHHHHHHHcCCCCcccCCcCCccCCCCCC-CCCcccccCCCCeEEcC------CCCEEEEEecCcccCCcCCh
Confidence 34468999999999975544432 348985 5789999 9999973 37999999999999999999
Q ss_pred CCCCCCCCCEEeCcCCCC--------------------------------------------------------------
Q 003847 100 DLGMIEFLQYLDLSNNSL-------------------------------------------------------------- 117 (791)
Q Consensus 100 ~~~~l~~L~~L~L~~N~l-------------------------------------------------------------- 117 (791)
+|++|++|++|+|++|.+
T Consensus 100 ~l~~L~~L~~L~Ls~N~~~~~~~~~~~~~~~~~~~~~~~~~l~l~l~~~~l~~~~~~~~~~~~~~l~~~~l~~~~~~~~~ 179 (636)
T 4eco_A 100 AIGQLTELEVLALGSHGEKVNERLFGPKGISANMSDEQKQKMRMHYQKTFVDYDPREDFSDLIKDCINSDPQQKSIKKSS 179 (636)
T ss_dssp GGGGCTTCCEEESCCGGGGGTCCSBSTTSBCTTCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHHCTTSCCCCCCC
T ss_pred HHhcCccceEEECcCCccccCCccccccccccCchHHHHHHHHhhHHHhhhccCchhhHHHHHHHHhhcCcccccccccc
Confidence 999999999999999843
Q ss_pred ----------------CCCCcccccCCCCccEEEccCCcCCCC-----------------CccccC--CCCCCCEEeCcC
Q 003847 118 ----------------NGSLSFSLFNASQLRNLDLSNNLISGH-----------------LPETMG--SLHNLQLLNLSD 162 (791)
Q Consensus 118 ----------------~~~~p~~~~~l~~L~~L~L~~N~l~~~-----------------~p~~~~--~l~~L~~L~ls~ 162 (791)
+| +|..|+++++|++|+|++|+|+|. +|..++ ++++|++|+|++
T Consensus 180 ~~~l~~l~l~~~~n~l~~-ip~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~ 258 (636)
T 4eco_A 180 RITLKDTQIGQLSNNITF-VSKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYN 258 (636)
T ss_dssp CCCCCTTTTTCCSCEEEE-ECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEEC
T ss_pred ccchhhhhhccccCCCcc-CCHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecC
Confidence 35 788999999999999999999986 999999 999999999999
Q ss_pred CcCCCCCccccCCCCCCCEEeCCCCc-CCC-CCCCCC---------cccceeccccccccccCCC--CcCC-ccccEEEc
Q 003847 163 NALAGKLPVSLTTLQSLTIVSLKNNY-FSD-GLPSKF---------NSVQVLDLSSNLINGSLPP--DIGG-YSLRYLNL 228 (791)
Q Consensus 163 N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l---------~~L~~L~ls~N~l~~~~p~--~~~~-~~L~~L~l 228 (791)
|++.+.+|..|.++++|++|+|++|+ +++ .+|..+ ++|++|+|++|+|+ .+|. .++. .+|++|+|
T Consensus 259 n~l~~~~p~~l~~l~~L~~L~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L 337 (636)
T 4eco_A 259 CPNLTKLPTFLKALPEMQLINVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLEC 337 (636)
T ss_dssp CTTCSSCCTTTTTCSSCCEEECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEEC
T ss_pred CcCCccChHHHhcCCCCCEEECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeC
Confidence 99999999999999999999999998 998 788644 78999999999999 8888 7776 58999999
Q ss_pred cCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-Ccccc-cccccccCCCC
Q 003847 229 SYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMN-QESSSFSGNLD 281 (791)
Q Consensus 229 ~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~-~~~~~~~~n~~ 281 (791)
++|+++|.+| .+.. +++|++|+|++|+++ .+|.. ..+.+ +..+.+.+|..
T Consensus 338 ~~N~l~g~ip-~~~~-l~~L~~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l 389 (636)
T 4eco_A 338 LYNQLEGKLP-AFGS-EIKLASLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKL 389 (636)
T ss_dssp CSCCCEEECC-CCEE-EEEESEEECCSSEEE-ECCTTSEEECTTCCEEECCSSCC
T ss_pred cCCcCccchh-hhCC-CCCCCEEECCCCccc-cccHhhhhhcccCcEEEccCCcC
Confidence 9999999999 6655 899999999999999 66654 34445 67777777753
No 257
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.96 E-value=2.2e-29 Score=300.80 Aligned_cols=236 Identities=22% Similarity=0.341 Sum_probs=204.5
Q ss_pred CCChhhHHHHHHHHhhccCCCCCccCCCCCCC----CCC--cee------------eeeeeCCCCCCCCCCcEEEEEcCC
Q 003847 29 LGLNTDGVLLLSFKYSVLSDPLGVLGSWNYND----ENP--CSW------------NGVTCASPGEGNNDSRVIGLALPN 90 (791)
Q Consensus 29 ~~~~~~~~~ll~~k~~~~~~~~~~l~sw~~~~----~~~--c~w------------~gv~C~~~~~~~~~~~v~~L~L~~ 90 (791)
++...|..||++||.++ .+| +|+.++ .+| |.| .||+|+. .++|+.|+|++
T Consensus 265 ~~~~~d~~ALl~~k~~l-~~~-----~W~~~~~~~~~~~~~C~W~~~~~~~~w~~~~GV~C~~------~~~V~~L~Ls~ 332 (876)
T 4ecn_A 265 AEYIKDYKALKAIWEAL-DGK-----NWRYYSGTINNTIHSLNWNFNKELDMWGDQPGVDLDN------NGRVTGLSLAG 332 (876)
T ss_dssp CHHHHHHHHHHHHHHHT-TGG-----GCCCCCSSCSSCCCCCSCCCSSCGGGTTCCTTEEECT------TSCEEEEECTT
T ss_pred ccchHHHHHHHHHHHHc-CCC-----CCCcCCCcccccCCccccccccccccccCcCceEecC------CCCEEEEECcc
Confidence 34557999999999998 455 787554 456 999 9999973 47999999999
Q ss_pred CCCccCCCcCCCCCCCCCEEeC-cCCCCCCC-------------------------------------------------
Q 003847 91 SQLLGSIPADLGMIEFLQYLDL-SNNSLNGS------------------------------------------------- 120 (791)
Q Consensus 91 ~~l~~~~~~~~~~l~~L~~L~L-~~N~l~~~------------------------------------------------- 120 (791)
|+|.|.+|+.|++|++|++|+| ++|.+.|.
T Consensus 333 ~~L~G~ip~~l~~L~~L~~LdLss~N~lsG~~~~~~~~~~~~l~~~~l~~lr~~~~~~~l~~~~~~~~s~l~~~~l~~~~ 412 (876)
T 4ecn_A 333 FGAKGRVPDAIGQLTELKVLSFGTHSETVSGRLFGDEELTPDMSEERKHRIRMHYKKMFLDYDQRLNLSDLLQDAINRNP 412 (876)
T ss_dssp TCCEEEECGGGGGCTTCCEEESCCTTHHHHTTCBTTBCCCSSCCHHHHHHHHTHHHHHHTCCCGGGGSCHHHHHHHHTCT
T ss_pred CCCCCcCchHHhccccceEeeecccccccccccccccccccccchhHHHHHHHhhhhhhhccCcchhhhHHHHHHhhhCc
Confidence 9999999999999999999999 77765443
Q ss_pred ---------------------------CcccccCCCCccEEEccCCcCCC-----------------CCccccC--CCCC
Q 003847 121 ---------------------------LSFSLFNASQLRNLDLSNNLISG-----------------HLPETMG--SLHN 154 (791)
Q Consensus 121 ---------------------------~p~~~~~l~~L~~L~L~~N~l~~-----------------~~p~~~~--~l~~ 154 (791)
+|..|+++++|++|+|++|+|+| .+|..++ ++++
T Consensus 413 ~~~~i~~~~~l~l~~l~l~~~~N~L~~IP~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~ 492 (876)
T 4ecn_A 413 EMKPIKKDSRISLKDTQIGNLTNRITFISKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKD 492 (876)
T ss_dssp TSCCCCCCCCCCCCTTTTTCCSCEEEEECGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTT
T ss_pred cccccccccccchhhceeccccCcccchhHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCC
Confidence 78899999999999999999998 3999988 9999
Q ss_pred CCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCc-CCC-CCCCCC----------cccceeccccccccccCCC--CcCC
Q 003847 155 LQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNY-FSD-GLPSKF----------NSVQVLDLSSNLINGSLPP--DIGG 220 (791)
Q Consensus 155 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~-~~p~~l----------~~L~~L~ls~N~l~~~~p~--~~~~ 220 (791)
|++|+|++|++.+.+|..|.++++|+.|+|++|+ |++ .+|..+ ++|+.|+|++|+|+ .+|. .+..
T Consensus 493 L~~L~Ls~N~l~~~iP~~l~~L~~L~~L~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~ 571 (876)
T 4ecn_A 493 LTDVELYNCPNMTQLPDFLYDLPELQSLNIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQK 571 (876)
T ss_dssp CCEEEEESCTTCCSCCGGGGGCSSCCEEECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTT
T ss_pred CCEEECcCCCCCccChHHHhCCCCCCEEECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhc
Confidence 9999999999999999999999999999999998 998 777543 48999999999999 8888 7776
Q ss_pred -ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-Ccccc-cccccccCCCC
Q 003847 221 -YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMN-QESSSFSGNLD 281 (791)
Q Consensus 221 -~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~-~~~~~~~~n~~ 281 (791)
.+|++|+|++|+|+ .+| .+.. +++|+.|+|++|+++ .+|.. ..+.+ +..+.+.+|..
T Consensus 572 L~~L~~L~Ls~N~l~-~lp-~~~~-L~~L~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L 631 (876)
T 4ecn_A 572 MVKLGLLDCVHNKVR-HLE-AFGT-NVKLTDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKL 631 (876)
T ss_dssp CTTCCEEECTTSCCC-BCC-CCCT-TSEESEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCC
T ss_pred CCCCCEEECCCCCcc-cch-hhcC-CCcceEEECcCCccc-cchHHHhhccccCCEEECcCCCC
Confidence 58999999999999 999 6655 999999999999999 67755 44445 77777777753
No 258
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.94 E-value=3.6e-26 Score=238.83 Aligned_cols=216 Identities=22% Similarity=0.240 Sum_probs=183.6
Q ss_pred CCCceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCc
Q 003847 61 ENPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNL 140 (791)
Q Consensus 61 ~~~c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 140 (791)
.+.|.|.|+.|.+. ..++.+++++++++. +|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 2 ~~~C~~~~~~C~c~------~~~~~l~~~~~~l~~-ip~~~~--~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~ 72 (270)
T 2o6q_A 2 EALCKKDGGVCSCN------NNKNSVDCSSKKLTA-IPSNIP--ADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNK 72 (270)
T ss_dssp CCCBGGGTCSBEEE------TTTTEEECTTSCCSS-CCSCCC--TTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSC
T ss_pred CccCCCCCCCCEeC------CCCCEEEccCCCCCc-cCCCCC--CCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCc
Confidence 46899999999753 345689999999985 666554 689999999999998877899999999999999999
Q ss_pred CCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCC
Q 003847 141 ISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPD 217 (791)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~ 217 (791)
|+...+..|.++++|++|+|++|++++..+..|.++++|++|+|++|++++..+..| ++|++|+|++|+|++..+..
T Consensus 73 l~~i~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~ 152 (270)
T 2o6q_A 73 LQTLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGV 152 (270)
T ss_dssp CSCCCTTTTSSCTTCCEEECCSSCCCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTT
T ss_pred cCeeChhhhcCCCCCCEEECCCCcCCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhH
Confidence 997666778999999999999999998777888999999999999999999777654 78999999999999666665
Q ss_pred cCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCCCCCCC
Q 003847 218 IGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLDLCGQP 286 (791)
Q Consensus 218 ~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~ 286 (791)
+.. .+|++|+|++|+|+ .+|...+..+++|++|+|++|++++..+.. ..+.++..+.+.+|+|.|++.
T Consensus 153 ~~~l~~L~~L~L~~n~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 222 (270)
T 2o6q_A 153 FDKLTSLKELRLYNNQLK-RVPEGAFDKLTELKTLKLDNNQLKRVPEGAFDSLEKLKMLQLQENPWDCTCN 222 (270)
T ss_dssp TTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCSSS
T ss_pred ccCCcccceeEecCCcCc-EeChhHhccCCCcCEEECCCCcCCcCCHHHhccccCCCEEEecCCCeeCCCc
Confidence 665 58999999999999 566554445999999999999999766654 345678889999999999764
No 259
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.93 E-value=1.8e-25 Score=235.50 Aligned_cols=207 Identities=23% Similarity=0.198 Sum_probs=185.0
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCc-CCCCCccccCCCCCCCEE
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNL-ISGHLPETMGSLHNLQLL 158 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L 158 (791)
..+++.|+|++|++++..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|. ++...|..|.++++|++|
T Consensus 31 ~~~l~~L~l~~n~i~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L 110 (285)
T 1ozn_A 31 PAASQRIFLHGNRISHVPAASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTL 110 (285)
T ss_dssp CTTCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEE
T ss_pred CCCceEEEeeCCcCCccCHHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEE
Confidence 5689999999999999888899999999999999999998889999999999999999997 887778899999999999
Q ss_pred eCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCc
Q 003847 159 NLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLS 234 (791)
Q Consensus 159 ~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~ 234 (791)
+|++|++++..|..|.++++|++|+|++|++++..+..| ++|+.|+|++|+|++..+..+.. .+|++|+|++|+++
T Consensus 111 ~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~ 190 (285)
T 1ozn_A 111 HLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVA 190 (285)
T ss_dssp ECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC
T ss_pred ECCCCcCCEECHhHhhCCcCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCccc
Confidence 999999998889999999999999999999998776544 78999999999999766666766 58999999999999
Q ss_pred ccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCCCCCCCC
Q 003847 235 GEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLDLCGQPT 287 (791)
Q Consensus 235 g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~~ 287 (791)
+..|..+.. +++|+.|+|++|++++..+.. ..+.++..+.+.+|++.|++++
T Consensus 191 ~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~~~~ 243 (285)
T 1ozn_A 191 HVHPHAFRD-LGRLMTLYLFANNLSALPTEALAPLRALQYLRLNDNPWVCDCRA 243 (285)
T ss_dssp EECTTTTTT-CTTCCEEECCSSCCSCCCHHHHTTCTTCCEEECCSSCEECSGGG
T ss_pred ccCHhHccC-cccccEeeCCCCcCCcCCHHHcccCcccCEEeccCCCccCCCCc
Confidence 777887776 999999999999999866542 4566778899999999998764
No 260
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=99.92 E-value=3.2e-26 Score=261.74 Aligned_cols=188 Identities=13% Similarity=0.120 Sum_probs=144.2
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCch--------hhHHHHHHHHHHHhccCCCCccceeeEEEccCceEEEEe
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSV--------DRFRDFETQVRVIAKLVHPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~~~~~~~lv~e 551 (791)
.++||+|+||.||++.. .++.+|+|+...... ...+.+.+|++++++++||||+++..++...+..|+|||
T Consensus 341 ~~~LG~G~fg~Vy~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~~~~~~~~lVmE 419 (540)
T 3en9_A 341 EHLIGKGAEADIKRDSY-LDFDVIIKERVKKGYRDERLDENIRKSRTAREARYLALVKDFGIPAPYIFDVDLDNKRIMMS 419 (540)
T ss_dssp -------CCEEEEEEEC-SSCEEEEEEECCCTTSCHHHHHHHHHHHHHHHHHHHHHGGGGTCCCCCEEEEETTTTEEEEE
T ss_pred CCEEeeCCCEEEEEEEE-CCCeEEEEEEecccccchhhhhHHHHHHHHHHHHHHHhcCCCCcCceEEEEEeCCccEEEEE
Confidence 56899999999999954 578899998643211 113458999999999999999977777777888899999
Q ss_pred ccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCC
Q 003847 552 FVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTS 631 (791)
Q Consensus 552 ~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~ 631 (791)
|+++++|.+++.. +..|+.|+++||+|||++||+||||||+|||++. .+||+|||+++.......
T Consensus 420 ~~~ggsL~~~l~~-------------~~~i~~qi~~aL~~LH~~gIiHrDiKp~NILl~~--~~kL~DFGla~~~~~~~~ 484 (540)
T 3en9_A 420 YINGKLAKDVIED-------------NLDIAYKIGEIVGKLHKNDVIHNDLTTSNFIFDK--DLYIIDFGLGKISNLDED 484 (540)
T ss_dssp CCCSEEHHHHSTT-------------CTHHHHHHHHHHHHHHHTTEECTTCCTTSEEESS--SEEECCCTTCEECCCHHH
T ss_pred CCCCCCHHHHHHH-------------HHHHHHHHHHHHHHHHHCcCccCCCCHHHEEECC--eEEEEECccCEECCCccc
Confidence 9999999998764 4589999999999999999999999999999998 999999999997653211
Q ss_pred CCcCCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccC--CCCCCchhhHHHHHHHHHHHhCC
Q 003847 632 SSKAGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRS--IKPNPKWDVYSFGVILLELLTGK 709 (791)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~--~~~~~~sDvwSlGvil~elltG~ 709 (791)
..... .......+||+.|||||++.. ..|+..+|+||..+-.++.+.++
T Consensus 485 ~~~~~-----------------------------~~~~~~~~GT~~y~APEv~~~~~~~Y~~~~d~ws~vl~~l~~v~~r 535 (540)
T 3en9_A 485 KAVDL-----------------------------IVFKKAVLSTHHEKFDEIWERFLEGYKSVYDRWEIILELMKDVERR 535 (540)
T ss_dssp HHHHH-----------------------------HHHHHHHHHHCGGGHHHHHHHHHHHHHHHCTTHHHHHHHHHHHHTC
T ss_pred cccch-----------------------------hhhhhhhcCCCCcCCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhc
Confidence 00000 000113459999999999986 56788899999999888888777
Q ss_pred cch
Q 003847 710 VIV 712 (791)
Q Consensus 710 ~pf 712 (791)
.+|
T Consensus 536 ~rY 538 (540)
T 3en9_A 536 ARY 538 (540)
T ss_dssp SCC
T ss_pred ccc
Confidence 665
No 261
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.92 E-value=3.4e-25 Score=248.46 Aligned_cols=206 Identities=19% Similarity=0.186 Sum_probs=144.9
Q ss_pred CcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeC
Q 003847 81 SRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNL 160 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 160 (791)
..++.|+|++|++.+..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|
T Consensus 64 ~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L 143 (440)
T 3zyj_A 64 TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRLTTIPNGAFVYLSKLKELWL 143 (440)
T ss_dssp TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCCSSCCTTTSCSCSSCCEEEC
T ss_pred CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcCCeeCHhHhhccccCceeeC
Confidence 45666777777777666666777777777777777776666666666777777777777776555556666666777777
Q ss_pred cCCcCCCCCccc-------------------------cCCCCCCCEEeCCCCcCCCCCCC--CCcccceecccccccccc
Q 003847 161 SDNALAGKLPVS-------------------------LTTLQSLTIVSLKNNYFSDGLPS--KFNSVQVLDLSSNLINGS 213 (791)
Q Consensus 161 s~N~l~~~~p~~-------------------------~~~l~~L~~L~L~~N~l~~~~p~--~l~~L~~L~ls~N~l~~~ 213 (791)
++|+|+...+.. |.++++|++|+|++|+|+. +|. .+++|+.|+|++|+|++.
T Consensus 144 ~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~l~~L~~L~Ls~N~l~~~ 222 (440)
T 3zyj_A 144 RNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLRE-IPNLTPLIKLDELDLSGNHLSAI 222 (440)
T ss_dssp CSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCSS-CCCCTTCSSCCEEECTTSCCCEE
T ss_pred CCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCcc-ccccCCCcccCEEECCCCccCcc
Confidence 666666444434 4555556666666666554 232 236788888888888877
Q ss_pred CCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCCCCCCCCC
Q 003847 214 LPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLDLCGQPTK 288 (791)
Q Consensus 214 ~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~~~ 288 (791)
.|..+.. .+|++|+|++|+|++..|..+.. +++|+.|+|++|+|++..+.. ..+.++..+.+.+|+|.|+|.+.
T Consensus 223 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~Np~~CdC~l~ 298 (440)
T 3zyj_A 223 RPGSFQGLMHLQKLWMIQSQIQVIERNAFDN-LQSLVEINLAHNNLTLLPHDLFTPLHHLERIHLHHNPWNCNCDIL 298 (440)
T ss_dssp CTTTTTTCTTCCEEECTTCCCCEECTTSSTT-CTTCCEEECTTSCCCCCCTTTTSSCTTCCEEECCSSCEECSSTTH
T ss_pred ChhhhccCccCCEEECCCCceeEEChhhhcC-CCCCCEEECCCCCCCccChhHhccccCCCEEEcCCCCccCCCCch
Confidence 7777766 47888888888888555555544 999999999999999776665 34667888999999999998643
No 262
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.92 E-value=1.8e-24 Score=226.73 Aligned_cols=205 Identities=23% Similarity=0.169 Sum_probs=180.2
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
...++.|+|++|++++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 27 ~~~l~~L~ls~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 106 (276)
T 2z62_A 27 PFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLV 106 (276)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEE
T ss_pred CCCccEEECCCCcccccCHhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEE
Confidence 34699999999999998888999999999999999999987888999999999999999999988889999999999999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCC-CCCCC---cccceeccccccccccCCCCcCC-cccc----EEEccC
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDG-LPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLR----YLNLSY 230 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~----~L~l~~ 230 (791)
|++|++++..+..+.++++|++|+|++|++++. +|..| ++|++|+|++|+|++..+..+.. .+|+ +|++++
T Consensus 107 l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~ 186 (276)
T 2z62_A 107 AVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSL 186 (276)
T ss_dssp CTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCS
T ss_pred CCCCCccccCchhcccCCCCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCC
Confidence 999999988777899999999999999999874 46655 78999999999999777766665 3566 899999
Q ss_pred CcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCCCCCCC
Q 003847 231 NRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLDLCGQP 286 (791)
Q Consensus 231 N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~ 286 (791)
|+++ .+|...+. ..+|+.|+|++|++++..+.. ..+.++..+.+.+|++.|+++
T Consensus 187 n~l~-~~~~~~~~-~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 241 (276)
T 2z62_A 187 NPMN-FIQPGAFK-EIRLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 241 (276)
T ss_dssp SCCC-EECTTSSC-SCCEEEEECCSSCCSCCCTTTTTTCCSCCEEECCSSCBCCCTT
T ss_pred Cccc-ccCccccC-CCcccEEECCCCceeecCHhHhcccccccEEEccCCcccccCC
Confidence 9999 66666665 568999999999999776654 456778889999999999875
No 263
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.92 E-value=1.3e-24 Score=231.47 Aligned_cols=224 Identities=22% Similarity=0.248 Sum_probs=160.9
Q ss_pred CCceeeeeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCC-----------------
Q 003847 62 NPCSWNGVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGS----------------- 120 (791)
Q Consensus 62 ~~c~w~gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~----------------- 120 (791)
..|.|.+|.|+..+- .....+++.|+|++|+++...+..|.++++|++|+|++|+|+..
T Consensus 5 C~C~~~~l~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~ 84 (306)
T 2z66_A 5 CSCSGTEIRCNSKGLTSVPTGIPSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSSNGLSFKGCCSQSDFGTTSLKYLD 84 (306)
T ss_dssp CEEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCEEEEEEHHHHSCSCCCEEE
T ss_pred CeeCCCEEEcCCCCcccCCCCCCCCCCEEECCCCccCccCHhHhhccccCCEEECCCCccCcccCcccccccccccCEEE
Confidence 448999999974321 11235799999999999866666689999999999999988732
Q ss_pred --------CcccccCCCCccEEEccCCcCCCCCc-cccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCC
Q 003847 121 --------LSFSLFNASQLRNLDLSNNLISGHLP-ETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSD 191 (791)
Q Consensus 121 --------~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 191 (791)
+|..+.++++|++|+|++|++++..+ ..+.++++|++|+|++|.+++..+..|.++++|++|+|++|.+++
T Consensus 85 Ls~n~i~~l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~ 164 (306)
T 2z66_A 85 LSFNGVITMSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQE 164 (306)
T ss_dssp CCSCSEEEEEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEEECTTCEEGG
T ss_pred CCCCccccChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEEECCCCcccc
Confidence 23345556666666666666664433 456677777777777777776667777777777777887777776
Q ss_pred -CCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCC
Q 003847 192 -GLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESN 266 (791)
Q Consensus 192 -~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~ 266 (791)
.+|..+ ++|++|+|++|+|++..|..+.. .+|++|+|++|++++..+..+. .+++|++|+|++|++++..|...
T Consensus 165 ~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~L~~N~l~~~~~~~~ 243 (306)
T 2z66_A 165 NFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYK-CLNSLQVLDYSLNHIMTSKKQEL 243 (306)
T ss_dssp GEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGT-TCTTCCEEECTTSCCCBCSSSSC
T ss_pred ccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhcc-CcccCCEeECCCCCCcccCHHHH
Confidence 445443 67888888888888777777765 5788888888888844443444 48888888888888888877654
Q ss_pred cc--cccccccccCCCCCCCCC
Q 003847 267 VF--MNQESSSFSGNLDLCGQP 286 (791)
Q Consensus 267 ~~--~~~~~~~~~~n~~lc~~~ 286 (791)
.. .++..+.+.+|++.|++.
T Consensus 244 ~~~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 244 QHFPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CCCCTTCCEEECTTCCEECSGG
T ss_pred HhhhccCCEEEccCCCeecccC
Confidence 32 367778888888888754
No 264
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.91 E-value=3.6e-24 Score=221.06 Aligned_cols=192 Identities=21% Similarity=0.195 Sum_probs=166.9
Q ss_pred CCceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcC
Q 003847 62 NPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLI 141 (791)
Q Consensus 62 ~~c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 141 (791)
+||.|.|.+|. ...+.+++++++++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 3 ~Cp~~~gC~C~--------~~~~~l~~~~~~l~-~~p~~~~--~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l 71 (251)
T 3m19_A 3 TCETVTGCTCN--------EGKKEVDCQGKSLD-SVPSGIP--ADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQL 71 (251)
T ss_dssp -CHHHHSSEEE--------GGGTEEECTTCCCS-SCCSCCC--TTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCC
T ss_pred cCCCCCceEcC--------CCCeEEecCCCCcc-ccCCCCC--CCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcC
Confidence 57899999995 23457999999998 5666665 6899999999999999999999999999999999999
Q ss_pred CCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCC---CcccceeccccccccccCCCCc
Q 003847 142 SGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSK---FNSVQVLDLSSNLINGSLPPDI 218 (791)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---l~~L~~L~ls~N~l~~~~p~~~ 218 (791)
++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+.. +++|+.|+|++|+|++..+..+
T Consensus 72 ~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~ 151 (251)
T 3m19_A 72 QTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAF 151 (251)
T ss_dssp CCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTT
T ss_pred CccCHhHhccCCcCCEEECCCCcccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHc
Confidence 9988888999999999999999999888889999999999999999999877655 4789999999999997777677
Q ss_pred CC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC
Q 003847 219 GG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES 265 (791)
Q Consensus 219 ~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~ 265 (791)
.. .+|++|+|++|+|+ .+|...+..+++|+.|+|++|++++..++.
T Consensus 152 ~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~~~~~ 198 (251)
T 3m19_A 152 DKLTNLQTLSLSTNQLQ-SVPHGAFDRLGKLQTITLFGNQFDCSRCEI 198 (251)
T ss_dssp TTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSCCBCTTSTTH
T ss_pred CcCcCCCEEECCCCcCC-ccCHHHHhCCCCCCEEEeeCCceeCCcccc
Confidence 66 58999999999999 455444445999999999999999875543
No 265
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.91 E-value=3.2e-24 Score=233.20 Aligned_cols=223 Identities=22% Similarity=0.254 Sum_probs=165.8
Q ss_pred CCCceeeeeeeCCCCC------CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEE
Q 003847 61 ENPCSWNGVTCASPGE------GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNL 134 (791)
Q Consensus 61 ~~~c~w~gv~C~~~~~------~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 134 (791)
..+|.|.|+ |+..+. ..-..+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|
T Consensus 27 ~~~C~~~~~-c~~~~~~l~~iP~~~~~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L 105 (353)
T 2z80_A 27 SLSCDRNGI-CKGSSGSLNSIPSGLTEAVKSLDLSNNRITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHL 105 (353)
T ss_dssp CCEECTTSE-EECCSTTCSSCCTTCCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred CCCCCCCeE-eeCCCCCcccccccccccCcEEECCCCcCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEE
Confidence 356888887 653221 1123478999999999998777789999999999999999998778889999999999
Q ss_pred EccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCc-cccCCCCCCCEEeCCCC-cCCCCCCCCC---cccceecccccc
Q 003847 135 DLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLP-VSLTTLQSLTIVSLKNN-YFSDGLPSKF---NSVQVLDLSSNL 209 (791)
Q Consensus 135 ~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~L~~N-~l~~~~p~~l---~~L~~L~ls~N~ 209 (791)
+|++|+|++..+..|.++++|++|+|++|++++..+ ..|.++++|++|+|++| .+.+..+..| ++|+.|+|++|+
T Consensus 106 ~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~ 185 (353)
T 2z80_A 106 DLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGETSLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASD 185 (353)
T ss_dssp ECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETT
T ss_pred ECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCchhhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCC
Confidence 999999996666668999999999999999985444 47888999999999998 4666555544 678888999998
Q ss_pred ccccCCCCcCC-ccccEEEccCCcC------------------------ccc----------------------------
Q 003847 210 INGSLPPDIGG-YSLRYLNLSYNRL------------------------SGE---------------------------- 236 (791)
Q Consensus 210 l~~~~p~~~~~-~~L~~L~l~~N~l------------------------~g~---------------------------- 236 (791)
+++..|..+.. .+|++|++++|++ ++.
T Consensus 186 l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~ 265 (353)
T 2z80_A 186 LQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTSSVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDES 265 (353)
T ss_dssp CCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTTTEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHH
T ss_pred cCccCHHHHhccccCCeecCCCCccccchhhhhhhcccccEEECCCCccccccccccccccccchhhccccccccccCcc
Confidence 88777777655 3455555555544 431
Q ss_pred ---CchhHhhcCCCCcEEEcccCcCcccCCCC--CcccccccccccCCCCCCCCC
Q 003847 237 ---IPPQFGEKIPVNATIDLSFNNLTGEIPES--NVFMNQESSSFSGNLDLCGQP 286 (791)
Q Consensus 237 ---ip~~~~~~l~~l~~l~l~~N~l~~~~p~~--~~~~~~~~~~~~~n~~lc~~~ 286 (791)
+|..+.. +++|+.|+|++|+++ .+|.. ..+.++..+.+.+|++.|+++
T Consensus 266 l~~l~~~l~~-l~~L~~L~Ls~N~l~-~i~~~~~~~l~~L~~L~L~~N~~~~~~~ 318 (353)
T 2z80_A 266 LFQVMKLLNQ-ISGLLELEFSRNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCP 318 (353)
T ss_dssp HHHHHHHHHT-CTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred hhhhHHHHhc-ccCCCEEECCCCCCC-ccCHHHHhcCCCCCEEEeeCCCccCcCC
Confidence 2233333 677788888888887 34443 356677778888888888754
No 266
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.91 E-value=7.6e-24 Score=238.28 Aligned_cols=221 Identities=19% Similarity=0.176 Sum_probs=167.9
Q ss_pred eeeeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcC
Q 003847 66 WNGVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLI 141 (791)
Q Consensus 66 w~gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 141 (791)
|..|.|...+- .....+++.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 56 ~~~v~c~~~~l~~iP~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n~l 135 (452)
T 3zyi_A 56 FSKVVCTRRGLSEVPQGIPSNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDNWL 135 (452)
T ss_dssp SCEEECCSSCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CcEEEECCCCcCccCCCCCCCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCCcC
Confidence 45677753220 11235788999999999998888999999999999999999988888899999999999999999
Q ss_pred CCCCccccCCCCCCCEEeCcCCcCCCCCccccC-------------------------CCCCCCEEeCCCCcCCCCCCC-
Q 003847 142 SGHLPETMGSLHNLQLLNLSDNALAGKLPVSLT-------------------------TLQSLTIVSLKNNYFSDGLPS- 195 (791)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-------------------------~l~~L~~L~L~~N~l~~~~p~- 195 (791)
++..+..|.++++|++|+|++|+|++..+..|. ++++|++|+|++|+|++. |.
T Consensus 136 ~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~~-~~~ 214 (452)
T 3zyi_A 136 TVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKDM-PNL 214 (452)
T ss_dssp SBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSSC-CCC
T ss_pred CccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCccccc-ccc
Confidence 877777788899999999999988855554444 455555555555555542 22
Q ss_pred -CCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-Ccccccc
Q 003847 196 -KFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQE 272 (791)
Q Consensus 196 -~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~ 272 (791)
.+++|+.|+|++|+|++..|..+.. .+|++|+|++|+|++..|..+.. +++|+.|+|++|+|++..+.. ..+.++.
T Consensus 215 ~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 293 (452)
T 3zyi_A 215 TPLVGLEELEMSGNHFPEIRPGSFHGLSSLKKLWVMNSQVSLIERNAFDG-LASLVELNLAHNNLSSLPHDLFTPLRYLV 293 (452)
T ss_dssp TTCTTCCEEECTTSCCSEECGGGGTTCTTCCEEECTTSCCCEECTTTTTT-CTTCCEEECCSSCCSCCCTTSSTTCTTCC
T ss_pred cccccccEEECcCCcCcccCcccccCccCCCEEEeCCCcCceECHHHhcC-CCCCCEEECCCCcCCccChHHhccccCCC
Confidence 2357777888888887777777766 47888888888888555655554 899999999999998766655 3456788
Q ss_pred cccccCCCCCCCCCCC
Q 003847 273 SSSFSGNLDLCGQPTK 288 (791)
Q Consensus 273 ~~~~~~n~~lc~~~~~ 288 (791)
.+.+.+|+|.|+|.+.
T Consensus 294 ~L~L~~Np~~CdC~~~ 309 (452)
T 3zyi_A 294 ELHLHHNPWNCDCDIL 309 (452)
T ss_dssp EEECCSSCEECSTTTH
T ss_pred EEEccCCCcCCCCCch
Confidence 8999999999998753
No 267
>4fcg_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, LRR, N- and C-terminal helices; 2.00A {Xanthomonas campestris PV}
Probab=99.91 E-value=2.1e-24 Score=231.83 Aligned_cols=189 Identities=25% Similarity=0.317 Sum_probs=172.3
Q ss_pred CCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCC--
Q 003847 74 PGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGS-- 151 (791)
Q Consensus 74 ~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~-- 151 (791)
|..+....+++.|+|++|+++ .+|..|+.+++|++|+|++|+|+ .+|..|.++++|++|+|++|++.+.+|..+..
T Consensus 97 p~~l~~l~~L~~L~L~~n~l~-~lp~~~~~l~~L~~L~Ls~n~l~-~lp~~l~~l~~L~~L~L~~n~~~~~~p~~~~~~~ 174 (328)
T 4fcg_A 97 PDQAFRLSHLQHMTIDAAGLM-ELPDTMQQFAGLETLTLARNPLR-ALPASIASLNRLRELSIRACPELTELPEPLASTD 174 (328)
T ss_dssp CSCGGGGTTCSEEEEESSCCC-CCCSCGGGGTTCSEEEEESCCCC-CCCGGGGGCTTCCEEEEEEETTCCCCCSCSEEEC
T ss_pred ChhhhhCCCCCEEECCCCCcc-chhHHHhccCCCCEEECCCCccc-cCcHHHhcCcCCCEEECCCCCCccccChhHhhcc
Confidence 333445789999999999999 88999999999999999999999 78999999999999999999999999988765
Q ss_pred -------CCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCC--CCcccceeccccccccccCCCCcCC-c
Q 003847 152 -------LHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPS--KFNSVQVLDLSSNLINGSLPPDIGG-Y 221 (791)
Q Consensus 152 -------l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~l~~L~~L~ls~N~l~~~~p~~~~~-~ 221 (791)
+++|++|+|++|+|+ .+|..+.++++|++|+|++|++++..+. .+++|++|+|++|.+.+.+|..+.. .
T Consensus 175 ~~~~~~~l~~L~~L~L~~n~l~-~lp~~l~~l~~L~~L~L~~N~l~~l~~~l~~l~~L~~L~Ls~n~~~~~~p~~~~~l~ 253 (328)
T 4fcg_A 175 ASGEHQGLVNLQSLRLEWTGIR-SLPASIANLQNLKSLKIRNSPLSALGPAIHHLPKLEELDLRGCTALRNYPPIFGGRA 253 (328)
T ss_dssp -CCCEEESTTCCEEEEEEECCC-CCCGGGGGCTTCCEEEEESSCCCCCCGGGGGCTTCCEEECTTCTTCCBCCCCTTCCC
T ss_pred chhhhccCCCCCEEECcCCCcC-cchHhhcCCCCCCEEEccCCCCCcCchhhccCCCCCEEECcCCcchhhhHHHhcCCC
Confidence 999999999999999 8899999999999999999999974432 3478999999999999999999887 5
Q ss_pred cccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCC
Q 003847 222 SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESN 266 (791)
Q Consensus 222 ~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~ 266 (791)
+|++|+|++|.+.+.+|..+.. +++|++|+|++|++.+.+|+..
T Consensus 254 ~L~~L~L~~n~~~~~~p~~~~~-l~~L~~L~L~~n~~~~~iP~~l 297 (328)
T 4fcg_A 254 PLKRLILKDCSNLLTLPLDIHR-LTQLEKLDLRGCVNLSRLPSLI 297 (328)
T ss_dssp CCCEEECTTCTTCCBCCTTGGG-CTTCCEEECTTCTTCCCCCGGG
T ss_pred CCCEEECCCCCchhhcchhhhc-CCCCCEEeCCCCCchhhccHHH
Confidence 8999999999999999999877 9999999999999999999764
No 268
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.91 E-value=1.4e-23 Score=221.33 Aligned_cols=200 Identities=24% Similarity=0.208 Sum_probs=164.8
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|++++++|+. +|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|++. +.. +.+++|++|+
T Consensus 9 l~~l~~l~~~~~~l~~-ip~~~~--~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~-~~~-~~l~~L~~L~ 83 (290)
T 1p9a_G 9 VASHLEVNCDKRNLTA-LPPDLP--KDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKL-QVD-GTLPVLGTLD 83 (290)
T ss_dssp STTCCEEECTTSCCSS-CCSCCC--TTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEE-ECC-SCCTTCCEEE
T ss_pred cCCccEEECCCCCCCc-CCCCCC--CCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcc-cCC-CCCCcCCEEE
Confidence 5678889999999874 555554 6889999999999988888899999999999999999854 433 7889999999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSG 235 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g 235 (791)
|++|+|+ .+|..+..+++|++|+|++|+|++..+..| ++|++|+|++|+|++..+..+.. .+|++|+|++|+|+
T Consensus 84 Ls~N~l~-~l~~~~~~l~~L~~L~l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~- 161 (290)
T 1p9a_G 84 LSHNQLQ-SLPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLT- 161 (290)
T ss_dssp CCSSCCS-SCCCCTTTCTTCCEEECCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCS-
T ss_pred CCCCcCC-cCchhhccCCCCCEEECCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCC-
Confidence 9999998 788888899999999999999998776655 68999999999998666666655 58999999999998
Q ss_pred cCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCCCCCC
Q 003847 236 EIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCGQP 286 (791)
Q Consensus 236 ~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~ 286 (791)
.+|..++..+++|+.|+|++|+|+...+.......+..+.+.+|+|.|+|.
T Consensus 162 ~l~~~~~~~l~~L~~L~L~~N~l~~ip~~~~~~~~L~~l~L~~Np~~C~c~ 212 (290)
T 1p9a_G 162 ELPAGLLNGLENLDTLLLQENSLYTIPKGFFGSHLLPFAFLHGNPWLCNCE 212 (290)
T ss_dssp CCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCCCSEEECCSCCBCCSGG
T ss_pred ccCHHHhcCcCCCCEEECCCCcCCccChhhcccccCCeEEeCCCCccCcCc
Confidence 778777666999999999999998554444555677788889999999764
No 269
>1ozn_A Reticulon 4 receptor; NOGO receptor, MAD, myelination inhibition, OMGP, MAG, NOGO- signal transduction, neuronal regeneration, ligand binding; HET: NDG MAN NAG BMA; 1.52A {Homo sapiens} SCOP: c.10.2.7 PDB: 1p8t_A* 3kj4_A*
Probab=99.91 E-value=5.2e-24 Score=224.25 Aligned_cols=210 Identities=22% Similarity=0.170 Sum_probs=179.8
Q ss_pred CCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCC-CCCCCcccccCCCCccEEEccCCcCCCCCccccCCC
Q 003847 74 PGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNS-LNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSL 152 (791)
Q Consensus 74 ~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 152 (791)
+..+....+++.|+|++|++++..+..|..+++|++|+|++|. +....|..|.++++|++|+|++|++++..|..|.++
T Consensus 49 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l 128 (285)
T 1ozn_A 49 AASFRACRNLTILWLHSNVLARIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGL 128 (285)
T ss_dssp TTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSCTTCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTC
T ss_pred HHHcccCCCCCEEECCCCccceeCHhhcCCccCCCEEeCCCCCCccccCHHHhcCCcCCCEEECCCCcCCEECHhHhhCC
Confidence 3456678899999999999999999999999999999999997 887778999999999999999999998889999999
Q ss_pred CCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEc
Q 003847 153 HNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNL 228 (791)
Q Consensus 153 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l 228 (791)
++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..| ++|+.|+|++|+|++..|..+.. .+|++|+|
T Consensus 129 ~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l 208 (285)
T 1ozn_A 129 AALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYL 208 (285)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCEEECCCCcccccCHhHhccCCCccEEECCCCcccccCHHHhcCccccCEEECCCCcccccCHhHccCcccccEeeC
Confidence 999999999999998777889999999999999999998666544 78999999999999888988877 58999999
Q ss_pred cCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCCCC
Q 003847 229 SYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCG 284 (791)
Q Consensus 229 ~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~ 284 (791)
++|+|++ +|...+..+++|+.|+|++|++++..+....+..+.......|...|.
T Consensus 209 ~~n~l~~-~~~~~~~~l~~L~~L~l~~N~~~c~~~~~~~~~~l~~~~~~~~~~~c~ 263 (285)
T 1ozn_A 209 FANNLSA-LPTEALAPLRALQYLRLNDNPWVCDCRARPLWAWLQKFRGSSSEVPCS 263 (285)
T ss_dssp CSSCCSC-CCHHHHTTCTTCCEEECCSSCEECSGGGHHHHHHHHHCCSEECCCBEE
T ss_pred CCCcCCc-CCHHHcccCcccCEEeccCCCccCCCCcHHHHHHHHhcccccCccccC
Confidence 9999995 555544459999999999999998776543333333444445555554
No 270
>2o6q_A Variable lymphocyte receptor A; leucine-rich repeat protein, LRR, immune system; 2.50A {Eptatretus burgeri}
Probab=99.90 E-value=7.1e-23 Score=213.73 Aligned_cols=199 Identities=22% Similarity=0.197 Sum_probs=172.4
Q ss_pred eeeeeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCc
Q 003847 65 SWNGVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNL 140 (791)
Q Consensus 65 ~w~gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 140 (791)
.|..|.|....- ..-...++.|+|++|++.+..+..|..+++|++|+|++|+|+...+..|.++++|++|+|++|+
T Consensus 17 ~~~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~ 96 (270)
T 2o6q_A 17 NKNSVDCSSKKLTAIPSNIPADTKKLDLQSNKLSSLPSKAFHRLTKLRLLYLNDNKLQTLPAGIFKELKNLETLWVTDNK 96 (270)
T ss_dssp TTTEEECTTSCCSSCCSCCCTTCSEEECCSSCCSCCCTTSSSSCTTCCEEECCSSCCSCCCTTTTSSCTTCCEEECCSSC
T ss_pred CCCEEEccCCCCCccCCCCCCCCCEEECcCCCCCeeCHHHhcCCCCCCEEECCCCccCeeChhhhcCCCCCCEEECCCCc
Confidence 477899973221 1123568999999999998888899999999999999999997777778999999999999999
Q ss_pred CCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCC
Q 003847 141 ISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPD 217 (791)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~ 217 (791)
|++..+..|.++++|++|+|++|++++..+..|..+++|++|+|++|+|++..+..| ++|+.|+|++|+|++..+..
T Consensus 97 l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~ 176 (270)
T 2o6q_A 97 LQALPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSLKELRLYNNQLKRVPEGA 176 (270)
T ss_dssp CCCCCTTTTTTCSSCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred CCcCCHhHcccccCCCEEECCCCccCeeCHHHhCcCcCCCEEECCCCcCCccCHhHccCCcccceeEecCCcCcEeChhH
Confidence 998777889999999999999999998888889999999999999999998766544 78999999999999776666
Q ss_pred cCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCC
Q 003847 218 IGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPE 264 (791)
Q Consensus 218 ~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~ 264 (791)
+.. .+|++|+|++|+|+ .+|...+..+++|+.|+|++|++.+..+.
T Consensus 177 ~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~~ 223 (270)
T 2o6q_A 177 FDKLTELKTLKLDNNQLK-RVPEGAFDSLEKLKMLQLQENPWDCTCNG 223 (270)
T ss_dssp TTTCTTCCEEECCSSCCS-CCCTTTTTTCTTCCEEECCSSCBCCSSSS
T ss_pred hccCCCcCEEECCCCcCC-cCCHHHhccccCCCEEEecCCCeeCCCcc
Confidence 765 68999999999999 67766555699999999999999987654
No 271
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.89 E-value=3e-23 Score=233.67 Aligned_cols=122 Identities=19% Similarity=0.192 Sum_probs=84.1
Q ss_pred cCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCch
Q 003847 164 ALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPP 239 (791)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~ 239 (791)
++++..|..|..+++|++|+|++|++++..|..| ++|++|+|++|+|++..|..+.. .+|++|+|++|++++..|.
T Consensus 286 ~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~ 365 (455)
T 3v47_A 286 KIFALLKSVFSHFTDLEQLTLAQNEINKIDDNAFWGLTHLLKLNLSQNFLGSIDSRMFENLDKLEVLDLSYNHIRALGDQ 365 (455)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGGTTCTTCCEEECCSSCCCEECTT
T ss_pred cccccchhhcccCCCCCEEECCCCcccccChhHhcCcccCCEEECCCCccCCcChhHhcCcccCCEEECCCCcccccChh
Confidence 3333344556666777777777777776655544 56777777777777666666665 4788888888888766666
Q ss_pred hHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCCCCCCC
Q 003847 240 QFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLDLCGQP 286 (791)
Q Consensus 240 ~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~ 286 (791)
.+.. +++|++|+|++|++++..+.. ..+..+..+.+.+|++.|+++
T Consensus 366 ~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 412 (455)
T 3v47_A 366 SFLG-LPNLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 412 (455)
T ss_dssp TTTT-CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTT
T ss_pred hccc-cccccEEECCCCccccCCHhHhccCCcccEEEccCCCcccCCC
Confidence 6655 788888888888887655544 345567777888888888765
No 272
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.89 E-value=1e-22 Score=229.07 Aligned_cols=191 Identities=19% Similarity=0.146 Sum_probs=137.3
Q ss_pred EEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCC
Q 003847 84 IGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDN 163 (791)
Q Consensus 84 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 163 (791)
..++..+++++ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 57 ~~v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~n 133 (452)
T 3zyi_A 57 SKVVCTRRGLS-EVPQGIP--SNTRYLNLMENNIQMIQADTFRHLHHLEVLQLGRNSIRQIEVGAFNGLASLNTLELFDN 133 (452)
T ss_dssp CEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cEEEECCCCcC-ccCCCCC--CCccEEECcCCcCceECHHHcCCCCCCCEEECCCCccCCcChhhccCcccCCEEECCCC
Confidence 46788888887 4666554 78999999999999988999999999999999999999888899999999999999999
Q ss_pred cCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cc-------------------------cceeccccccccccCC
Q 003847 164 ALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NS-------------------------VQVLDLSSNLINGSLP 215 (791)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~-------------------------L~~L~ls~N~l~~~~p 215 (791)
+|++..+..|.++++|++|+|++|+|+...+..| ++ |++|+|++|+|++ +|
T Consensus 134 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~~-~~ 212 (452)
T 3zyi_A 134 WLTVIPSGAFEYLSKLRELWLRNNPIESIPSYAFNRVPSLMRLDLGELKKLEYISEGAFEGLFNLKYLNLGMCNIKD-MP 212 (452)
T ss_dssp CCSBCCTTTSSSCTTCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCTTCCEEECTTSCCSS-CC
T ss_pred cCCccChhhhcccCCCCEEECCCCCcceeCHhHHhcCCcccEEeCCCCCCccccChhhccCCCCCCEEECCCCcccc-cc
Confidence 9998777889999999999999999987544322 34 4445555555542 23
Q ss_pred CCcCCccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCC-cccccccccccCC
Q 003847 216 PDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESN-VFMNQESSSFSGN 279 (791)
Q Consensus 216 ~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n 279 (791)
......+|++|+|++|+|++..|..+.. +++|+.|+|++|++++..|... .+.++..+.+.+|
T Consensus 213 ~~~~l~~L~~L~Ls~N~l~~~~~~~~~~-l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~N 276 (452)
T 3zyi_A 213 NLTPLVGLEELEMSGNHFPEIRPGSFHG-LSSLKKLWVMNSQVSLIERNAFDGLASLVELNLAHN 276 (452)
T ss_dssp CCTTCTTCCEEECTTSCCSEECGGGGTT-CTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred cccccccccEEECcCCcCcccCcccccC-ccCCCEEEeCCCcCceECHHHhcCCCCCCEEECCCC
Confidence 2222235555566666665444444433 6666666666666665555432 2334444444444
No 273
>1ogq_A PGIP-2, polygalacturonase inhibiting protein; inhibitor; HET: NAG; 1.7A {Phaseolus vulgaris} SCOP: c.10.2.8
Probab=99.89 E-value=2.9e-24 Score=229.31 Aligned_cols=186 Identities=29% Similarity=0.407 Sum_probs=132.1
Q ss_pred CCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCC
Q 003847 74 PGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLH 153 (791)
Q Consensus 74 ~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 153 (791)
|..+....+++.|+|++|++++.+|..|+.+++|++|+|++|+|++.+|..|.++++|++|+|++|+|++.+|..+.+++
T Consensus 94 p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~l~ 173 (313)
T 1ogq_A 94 PPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKTLVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFS 173 (313)
T ss_dssp CGGGGGCTTCSEEEEEEECCEEECCGGGGGCTTCCEEECCSSEEESCCCGGGGGCTTCCEEECCSSCCEEECCGGGGCCC
T ss_pred ChhHhcCCCCCEEECcCCeeCCcCCHHHhCCCCCCEEeCCCCccCCcCChHHhcCCCCCeEECcCCcccCcCCHHHhhhh
Confidence 33444555666666666666666666666666666666666666666666666666666666666666655666665555
Q ss_pred -CCCEEeCcCCcCC-----------------------CCCccccCCCCCCCEEeCCCCcCCCCCCC--CCcccceecccc
Q 003847 154 -NLQLLNLSDNALA-----------------------GKLPVSLTTLQSLTIVSLKNNYFSDGLPS--KFNSVQVLDLSS 207 (791)
Q Consensus 154 -~L~~L~ls~N~l~-----------------------~~~p~~~~~l~~L~~L~L~~N~l~~~~p~--~l~~L~~L~ls~ 207 (791)
+|++|+|++|+++ +.+|..|..+++|+.|+|++|++++.+|. .+++|++|+|++
T Consensus 174 ~~L~~L~L~~N~l~~~~~~~~~~l~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~l~~L~~L~Ls~ 253 (313)
T 1ogq_A 174 KLFTSMTISRNRLTGKIPPTFANLNLAFVDLSRNMLEGDASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRN 253 (313)
T ss_dssp TTCCEEECCSSEEEEECCGGGGGCCCSEEECCSSEEEECCGGGCCTTSCCSEEECCSSEECCBGGGCCCCTTCCEEECCS
T ss_pred hcCcEEECcCCeeeccCChHHhCCcccEEECcCCcccCcCCHHHhcCCCCCEEECCCCceeeecCcccccCCCCEEECcC
Confidence 5555555555554 45555666677777777777777765554 337899999999
Q ss_pred ccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCc-Cccc
Q 003847 208 NLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNN-LTGE 261 (791)
Q Consensus 208 N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~-l~~~ 261 (791)
|+|++.+|..+.. .+|++|+|++|+|+|.+|.. . .+++|+.|++++|+ ++|.
T Consensus 254 N~l~~~~p~~l~~l~~L~~L~Ls~N~l~~~ip~~-~-~l~~L~~l~l~~N~~lc~~ 307 (313)
T 1ogq_A 254 NRIYGTLPQGLTQLKFLHSLNVSFNNLCGEIPQG-G-NLQRFDVSAYANNKCLCGS 307 (313)
T ss_dssp SCCEECCCGGGGGCTTCCEEECCSSEEEEECCCS-T-TGGGSCGGGTCSSSEEEST
T ss_pred CcccCcCChHHhcCcCCCEEECcCCcccccCCCC-c-cccccChHHhcCCCCccCC
Confidence 9999999998877 58999999999999999987 4 49999999999999 5553
No 274
>2z62_A TOLL-like receptor 4, variable lymphocyte recepto; TLR, VLR hybrid, MD-2, LPS, glycoprotein response, inflammatory response, innate immunity; HET: NAG FUL BMA; 1.70A {Homo sapiens} PDB: 2z65_A* 3ul8_A* 3ula_A* 3ul7_A*
Probab=99.89 E-value=6.5e-23 Score=214.78 Aligned_cols=191 Identities=20% Similarity=0.180 Sum_probs=171.2
Q ss_pred CCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCC
Q 003847 74 PGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLH 153 (791)
Q Consensus 74 ~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~ 153 (791)
+..+....+++.|+|++|++.+..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..+..+++++
T Consensus 45 ~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~ 124 (276)
T 2z62_A 45 SYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLK 124 (276)
T ss_dssp TTTTTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTSCCCCSTTCCCTTCT
T ss_pred HhHhccccCCcEEECCCCcCCccCHHHccCCcCCCEEECCCCccCccChhhhcCCccccEEECCCCCccccCchhcccCC
Confidence 34566788999999999999998888999999999999999999988888999999999999999999987777899999
Q ss_pred CCCEEeCcCCcCCCC-CccccCCCCCCCEEeCCCCcCCCCCCCCC---cccc----eeccccccccccCCCCcCCccccE
Q 003847 154 NLQLLNLSDNALAGK-LPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQ----VLDLSSNLINGSLPPDIGGYSLRY 225 (791)
Q Consensus 154 ~L~~L~ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~----~L~ls~N~l~~~~p~~~~~~~L~~ 225 (791)
+|++|+|++|++++. +|..|.++++|++|+|++|++++..+..+ .+|+ .|+|++|+|++..+..+...+|++
T Consensus 125 ~L~~L~l~~n~l~~~~l~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~l~l~L~ls~n~l~~~~~~~~~~~~L~~ 204 (276)
T 2z62_A 125 TLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLKE 204 (276)
T ss_dssp TCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHHHHTCTTCCEEEECCSSCCCEECTTSSCSCCEEE
T ss_pred CCCEEECcCCccceecCchhhccCCCCCEEECCCCCCCcCCHHHhhhhhhccccceeeecCCCcccccCccccCCCcccE
Confidence 999999999999974 69999999999999999999999777666 4555 899999999977777777779999
Q ss_pred EEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC
Q 003847 226 LNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES 265 (791)
Q Consensus 226 L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~ 265 (791)
|+|++|+|+ .+|..++..+++|+.|+|++|++++..|..
T Consensus 205 L~L~~n~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~~l 243 (276)
T 2z62_A 205 LALDTNQLK-SVPDGIFDRLTSLQKIWLHTNPWDCSCPRI 243 (276)
T ss_dssp EECCSSCCS-CCCTTTTTTCCSCCEEECCSSCBCCCTTTT
T ss_pred EECCCCcee-ecCHhHhcccccccEEEccCCcccccCCch
Confidence 999999999 677766666999999999999999988755
No 275
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.89 E-value=6.7e-23 Score=232.28 Aligned_cols=211 Identities=22% Similarity=0.143 Sum_probs=116.7
Q ss_pred CCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCC
Q 003847 76 EGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNL 155 (791)
Q Consensus 76 ~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L 155 (791)
.|....+++.|+|++|++++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..|.++++|
T Consensus 51 ~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L 130 (477)
T 2id5_A 51 EFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRLKLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNL 130 (477)
T ss_dssp TTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTC
T ss_pred HccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcCCccCcccccCCCCCCEEECCCCccccCChhHccccccC
Confidence 34444555555555555555555555555555555555555554444444555555555555555554444445555555
Q ss_pred CEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCC------------------------CC----------------
Q 003847 156 QLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGL------------------------PS---------------- 195 (791)
Q Consensus 156 ~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~------------------------p~---------------- 195 (791)
+.|+|++|.+++..+..|.++++|+.|+|++|++++.. +.
T Consensus 131 ~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~~ 210 (477)
T 2id5_A 131 KSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEALSHLHGLIVLRLRHLNINAIRDYSFKRLYRLKVLEISHW 210 (477)
T ss_dssp CEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHHTTCTTCCEEEEESCCCCEECTTCSCSCTTCCEEEEECC
T ss_pred CEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHhcccCCCcEEeCCCCcCcEeChhhcccCcccceeeCCCC
Confidence 55555555544444444444444444444444433221 10
Q ss_pred -----------------------------------CCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCch
Q 003847 196 -----------------------------------KFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPP 239 (791)
Q Consensus 196 -----------------------------------~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~ 239 (791)
.+++|+.|+|++|+|++..+..+.. .+|++|+|++|+|++..|.
T Consensus 211 ~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~ 290 (477)
T 2id5_A 211 PYLDTMTPNCLYGLNLTSLSITHCNLTAVPYLAVRHLVYLRFLNLSYNPISTIEGSMLHELLRLQEIQLVGGQLAVVEPY 290 (477)
T ss_dssp TTCCEECTTTTTTCCCSEEEEESSCCCSCCHHHHTTCTTCCEEECCSSCCCEECTTSCTTCTTCCEEECCSSCCSEECTT
T ss_pred ccccccCcccccCccccEEECcCCcccccCHHHhcCccccCeeECCCCcCCccChhhccccccCCEEECCCCccceECHH
Confidence 1134455555555555444444444 3666777777777655555
Q ss_pred hHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCCCCCCCC
Q 003847 240 QFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLDLCGQPT 287 (791)
Q Consensus 240 ~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~~ 287 (791)
.+.. +++|+.|+|++|+|++..+.. ..+.++..+.+.+|++.|+|.+
T Consensus 291 ~~~~-l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~c~c~~ 338 (477)
T 2id5_A 291 AFRG-LNYLRVLNVSGNQLTTLEESVFHSVGNLETLILDSNPLACDCRL 338 (477)
T ss_dssp TBTT-CTTCCEEECCSSCCSCCCGGGBSCGGGCCEEECCSSCEECSGGG
T ss_pred HhcC-cccCCEEECCCCcCceeCHhHcCCCcccCEEEccCCCccCccch
Confidence 5544 788888888888887655543 3455778888999999998753
No 276
>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*
Probab=99.89 E-value=1.9e-23 Score=218.96 Aligned_cols=130 Identities=18% Similarity=0.199 Sum_probs=108.2
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCch------------------hhHHHHHHHHHHHhccCCCCccceeeEEE
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSV------------------DRFRDFETQVRVIAKLVHPNLVRIRGFYW 541 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~------------------~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 541 (791)
...||+|+||.||+|...+|+.||||.++.... .....+.+|++++++++ | +++.+++.
T Consensus 95 ~~~iG~G~~g~Vy~~~~~~g~~valK~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~E~~~l~~l~--~-~~v~~~~~ 171 (282)
T 1zar_A 95 GKLMGEGKESAVFNCYSEKFGECVVKFHKVGHTSFKKVKEKRDYGDLHFSVLAIRSARNEFRALQKLQ--G-LAVPKVYA 171 (282)
T ss_dssp EEEEEECSSEEEEEEEETTTEEEEEEEECC------CCCC-------CHHHHHHHHHHHHHHHHHHTT--T-SSSCCEEE
T ss_pred cCEeccCCCceEEEEEeCCCCEEEEEEEECCCCchhhhhhhhhhcchhhHHHHHHHHHHHHHHHHhcc--C-CCcCeEEe
Confidence 478999999999999997899999999964321 13457899999999999 5 67777554
Q ss_pred ccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCCCeEEeccC
Q 003847 542 GVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDMEPKIGDFG 621 (791)
Q Consensus 542 ~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~~~kL~DFG 621 (791)
. +..++||||+++++|.+ +. . .....++.|++.||+|||+.||+||||||+|||++ ++.+||+|||
T Consensus 172 ~-~~~~lvmE~~~g~~L~~-l~---------~--~~~~~i~~qi~~~l~~lH~~giiHrDlkp~NILl~-~~~vkl~DFG 237 (282)
T 1zar_A 172 W-EGNAVLMELIDAKELYR-VR---------V--ENPDEVLDMILEEVAKFYHRGIVHGDLSQYNVLVS-EEGIWIIDFP 237 (282)
T ss_dssp E-ETTEEEEECCCCEEGGG-CC---------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEE-TTEEEECCCT
T ss_pred c-cceEEEEEecCCCcHHH-cc---------h--hhHHHHHHHHHHHHHHHHHCCCEeCCCCHHHEEEE-CCcEEEEECC
Confidence 3 56799999999999987 31 1 22457999999999999999999999999999999 9999999999
Q ss_pred ccccc
Q 003847 622 LERLV 626 (791)
Q Consensus 622 la~~~ 626 (791)
+++..
T Consensus 238 ~a~~~ 242 (282)
T 1zar_A 238 QSVEV 242 (282)
T ss_dssp TCEET
T ss_pred CCeEC
Confidence 98743
No 277
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.88 E-value=1.1e-22 Score=236.99 Aligned_cols=130 Identities=21% Similarity=0.117 Sum_probs=102.6
Q ss_pred CcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeC
Q 003847 81 SRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNL 160 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 160 (791)
.+++.|+|++|++.+..+..|+.+++|++|+|++|.|++..|..|.++++|++|+|++|.|++..+..|+++++|++|+|
T Consensus 75 ~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L 154 (597)
T 3oja_B 75 RQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSM 154 (597)
T ss_dssp CCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEEC
T ss_pred CCCcEEECCCCCCCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEe
Confidence 46778888888888888888888888888888888888888888888888888888888888656666788888888888
Q ss_pred cCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccc
Q 003847 161 SDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLI 210 (791)
Q Consensus 161 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l 210 (791)
++|.|++..|..|.++++|+.|+|++|.|++..+..+++|+.|++++|.+
T Consensus 155 s~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l 204 (597)
T 3oja_B 155 SNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLL 204 (597)
T ss_dssp CSSCCCBCCTTTTTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCC
T ss_pred eCCcCCCCChhhhhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCcc
Confidence 88888888888888888888888888888875544444444444444433
No 278
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.88 E-value=9.6e-23 Score=208.67 Aligned_cols=194 Identities=19% Similarity=0.206 Sum_probs=164.8
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCC-CCCCCcccccCCCCccEEEccC-CcCCCCCccccCCCCCCCE
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNS-LNGSLSFSLFNASQLRNLDLSN-NLISGHLPETMGSLHNLQL 157 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~ 157 (791)
...++.|+|++|++++..+..|..+++|++|+|++|+ +++..+..|.++++|++|+|++ |+|++..+..|.++++|++
T Consensus 30 ~~~l~~L~l~~n~l~~i~~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~ 109 (239)
T 2xwt_C 30 PPSTQTLKLIETHLRTIPSHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKF 109 (239)
T ss_dssp CTTCCEEEEESCCCSEECTTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCE
T ss_pred CCcccEEEEeCCcceEECHHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCE
Confidence 3479999999999999888899999999999999997 8877777899999999999999 9999777788999999999
Q ss_pred EeCcCCcCCCCCccccCCCCCCC---EEeCCCC-cCCCCCCCCC---cccc-eeccccccccccCCC-CcCCccccEEEc
Q 003847 158 LNLSDNALAGKLPVSLTTLQSLT---IVSLKNN-YFSDGLPSKF---NSVQ-VLDLSSNLINGSLPP-DIGGYSLRYLNL 228 (791)
Q Consensus 158 L~ls~N~l~~~~p~~~~~l~~L~---~L~L~~N-~l~~~~p~~l---~~L~-~L~ls~N~l~~~~p~-~~~~~~L~~L~l 228 (791)
|+|++|++++ +|. |..+++|+ +|+|++| ++++..+..| ++|+ .|+|++|+|+ .+|. .+...+|++|+|
T Consensus 110 L~l~~n~l~~-lp~-~~~l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~-~i~~~~~~~~~L~~L~L 186 (239)
T 2xwt_C 110 LGIFNTGLKM-FPD-LTKVYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFT-SVQGYAFNGTKLDAVYL 186 (239)
T ss_dssp EEEEEECCCS-CCC-CTTCCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCC-EECTTTTTTCEEEEEEC
T ss_pred EeCCCCCCcc-ccc-cccccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCc-ccCHhhcCCCCCCEEEc
Confidence 9999999996 776 89999998 9999999 9988666555 7899 9999999999 5554 445578999999
Q ss_pred cCCc-CcccCchhHhhcC-CCCcEEEcccCcCcccCCCCCcccccccccccCC
Q 003847 229 SYNR-LSGEIPPQFGEKI-PVNATIDLSFNNLTGEIPESNVFMNQESSSFSGN 279 (791)
Q Consensus 229 ~~N~-l~g~ip~~~~~~l-~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n 279 (791)
++|+ |+ .+|...+..+ ++|+.|+|++|++++..+. .+.++..+.+.++
T Consensus 187 ~~n~~l~-~i~~~~~~~l~~~L~~L~l~~N~l~~l~~~--~~~~L~~L~l~~~ 236 (239)
T 2xwt_C 187 NKNKYLT-VIDKDAFGGVYSGPSLLDVSQTSVTALPSK--GLEHLKELIARNT 236 (239)
T ss_dssp TTCTTCC-EECTTTTTTCSBCCSEEECTTCCCCCCCCT--TCTTCSEEECTTC
T ss_pred CCCCCcc-cCCHHHhhccccCCcEEECCCCccccCChh--HhccCceeeccCc
Confidence 9995 98 6766655558 9999999999999965443 4555555555444
No 279
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.88 E-value=1.1e-22 Score=246.56 Aligned_cols=209 Identities=26% Similarity=0.249 Sum_probs=143.5
Q ss_pred CCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCC
Q 003847 75 GEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHN 154 (791)
Q Consensus 75 ~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 154 (791)
..+....+++.|+|++|++.+..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++
T Consensus 284 ~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~ 363 (844)
T 3j0a_A 284 RVFETLKDLKVLNLAYNKINKIADEAFYGLDNLQVLNLSYNLLGELYSSNFYGLPKVAYIDLQKNHIAIIQDQTFKFLEK 363 (844)
T ss_dssp CCSSSCCCCCEEEEESCCCCEECTTTTTTCSSCCEEEEESCCCSCCCSCSCSSCTTCCEEECCSCCCCCCCSSCSCSCCC
T ss_pred hhhhcCCCCCEEECCCCcCCCCChHHhcCCCCCCEEECCCCCCCccCHHHhcCCCCCCEEECCCCCCCccChhhhcCCCC
Confidence 34455667777777777777777777777777777777777777666777777777777777777777666666777777
Q ss_pred CCEEeCcCCcCCCCC------------------c----------------------cccCCCCCCCEEeCCCCcCCCCCC
Q 003847 155 LQLLNLSDNALAGKL------------------P----------------------VSLTTLQSLTIVSLKNNYFSDGLP 194 (791)
Q Consensus 155 L~~L~ls~N~l~~~~------------------p----------------------~~~~~l~~L~~L~L~~N~l~~~~p 194 (791)
|+.|+|++|.+++.. | ..+.++++|+.|+|++|++++..+
T Consensus 364 L~~L~Ls~N~l~~i~~~~~L~~L~l~~N~l~~l~~~~~~l~~L~ls~N~l~~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~ 443 (844)
T 3j0a_A 364 LQTLDLRDNALTTIHFIPSIPDIFLSGNKLVTLPKINLTANLIHLSENRLENLDILYFLLRVPHLQILILNQNRFSSCSG 443 (844)
T ss_dssp CCEEEEETCCSCCCSSCCSCSEEEEESCCCCCCCCCCTTCCEEECCSCCCCSSTTHHHHTTCTTCCEEEEESCCCCCCCS
T ss_pred CCEEECCCCCCCcccCCCCcchhccCCCCcccccccccccceeecccCccccCchhhhhhcCCccceeeCCCCccccccc
Confidence 777777777665311 0 012245566666666666653211
Q ss_pred ------------------------------C---CCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchh
Q 003847 195 ------------------------------S---KFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQ 240 (791)
Q Consensus 195 ------------------------------~---~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~ 240 (791)
. .+++|+.|+|++|+|++..|..+.. .+|++|+|++|+|++ +|..
T Consensus 444 ~~~~~~~~~L~~L~Ls~N~l~~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~ 522 (844)
T 3j0a_A 444 DQTPSENPSLEQLFLGENMLQLAWETELCWDVFEGLSHLQVLYLNHNYLNSLPPGVFSHLTALRGLSLNSNRLTV-LSHN 522 (844)
T ss_dssp SSSSCSCTTCCBCEEESCCCSSSCCSCCCSSCSSCBCCEECCCCCHHHHTTCCTTSSSSCCSCSEEEEESCCCSS-CCCC
T ss_pred ccccccCCccccccCCCCccccccccccchhhhcCcccccEEECCCCcccccChhHccchhhhheeECCCCCCCc-cChh
Confidence 1 1256777778888887777766665 578888888888884 4443
Q ss_pred HhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCCCCCCCC
Q 003847 241 FGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCGQPTK 288 (791)
Q Consensus 241 ~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~ 288 (791)
.+ .++|+.|||++|+|++.+|.. +..+..+.+.+|++.|+|++.
T Consensus 523 ~~--~~~L~~L~Ls~N~l~~~~~~~--~~~L~~l~l~~Np~~C~c~~~ 566 (844)
T 3j0a_A 523 DL--PANLEILDISRNQLLAPNPDV--FVSLSVLDITHNKFICECELS 566 (844)
T ss_dssp CC--CSCCCEEEEEEECCCCCCSCC--CSSCCEEEEEEECCCCSSSCC
T ss_pred hh--hccccEEECCCCcCCCCChhH--hCCcCEEEecCCCcccccccH
Confidence 33 267888888888888888765 446778899999999988754
No 280
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.88 E-value=2.8e-23 Score=221.65 Aligned_cols=197 Identities=27% Similarity=0.307 Sum_probs=168.7
Q ss_pred CCcEEEEEcCCCCCccCCCcCC--CCCCCCCEEeCcCCCCCCCCcccccCC-----CCccEEEccCCcCCCCCccccCCC
Q 003847 80 DSRVIGLALPNSQLLGSIPADL--GMIEFLQYLDLSNNSLNGSLSFSLFNA-----SQLRNLDLSNNLISGHLPETMGSL 152 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l 152 (791)
..+++.|+|++|++++.+|..+ +.+++|++|+|++|+|++. |..+..+ ++|++|+|++|+|++..|..|+++
T Consensus 94 l~~L~~L~L~~n~l~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l 172 (312)
T 1wwl_A 94 ISGLQELTLENLEVTGTAPPPLLEATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVF 172 (312)
T ss_dssp TSCCCEEEEEEEBCBSCCCCCSSSCCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCC
T ss_pred cCCccEEEccCCcccchhHHHHHHhcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccC
Confidence 6789999999999999999886 9999999999999999977 8888887 999999999999998888999999
Q ss_pred CCCCEEeCcCCcCCCC--Ccccc--CCCCCCCEEeCCCCcCCC--CCCC----CCcccceeccccccccccCCC-CcCC-
Q 003847 153 HNLQLLNLSDNALAGK--LPVSL--TTLQSLTIVSLKNNYFSD--GLPS----KFNSVQVLDLSSNLINGSLPP-DIGG- 220 (791)
Q Consensus 153 ~~L~~L~ls~N~l~~~--~p~~~--~~l~~L~~L~L~~N~l~~--~~p~----~l~~L~~L~ls~N~l~~~~p~-~~~~- 220 (791)
++|++|+|++|++.+. +|..+ ..+++|++|+|++|+|++ .++. .+++|++|+|++|+|++.+|. .+..
T Consensus 173 ~~L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l 252 (312)
T 1wwl_A 173 PALSTLDLSDNPELGERGLISALCPLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWP 252 (312)
T ss_dssp SSCCEEECCSCTTCHHHHHHHHSCTTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCC
T ss_pred CCCCEEECCCCCcCcchHHHHHHHhccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhc
Confidence 9999999999998865 34444 899999999999999984 2222 347999999999999987753 3333
Q ss_pred ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCC
Q 003847 221 YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDL 282 (791)
Q Consensus 221 ~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l 282 (791)
.+|++|+|++|+|+ .+|..++ ++|++|||++|+|++. |....+.++..+.+.+|+..
T Consensus 253 ~~L~~L~Ls~N~l~-~ip~~~~---~~L~~L~Ls~N~l~~~-p~~~~l~~L~~L~L~~N~l~ 309 (312)
T 1wwl_A 253 SQLNSLNLSFTGLK-QVPKGLP---AKLSVLDLSYNRLDRN-PSPDELPQVGNLSLKGNPFL 309 (312)
T ss_dssp TTCCEEECTTSCCS-SCCSSCC---SEEEEEECCSSCCCSC-CCTTTSCEEEEEECTTCTTT
T ss_pred CCCCEEECCCCccC-hhhhhcc---CCceEEECCCCCCCCC-hhHhhCCCCCEEeccCCCCC
Confidence 68999999999999 8998775 7899999999999987 66666777888888888653
No 281
>1p9a_G Platelet glycoprotein IB alpha chain precursor; platelet receptors, glycocalicin, leucine rich repeats, BLOO clotting; HET: NAG BMA; 1.70A {Homo sapiens} SCOP: c.10.2.7 PDB: 1ook_G* 1qyy_A* 3pmh_G* 1m0z_A 1m10_B 1sq0_B 1gwb_A* 1p8v_A* 1u0n_D 3p72_A
Probab=99.88 E-value=2.9e-22 Score=211.14 Aligned_cols=178 Identities=25% Similarity=0.146 Sum_probs=160.4
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
...++.|+|++|++++..+..|..+++|++|+|++|.|++..+ ...+++|++|+|++|+|+ .+|..+.++++|++|+
T Consensus 30 ~~~l~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~L~~L~ 106 (290)
T 1p9a_G 30 PKDTTILHLSENLLYTFSLATLMPYTRLTQLNLDRAELTKLQV--DGTLPVLGTLDLSHNQLQ-SLPLLGQTLPALTVLD 106 (290)
T ss_dssp CTTCCEEECTTSCCSEEEGGGGTTCTTCCEEECTTSCCCEEEC--CSCCTTCCEEECCSSCCS-SCCCCTTTCTTCCEEE
T ss_pred CCCCCEEEcCCCcCCccCHHHhhcCCCCCEEECCCCccCcccC--CCCCCcCCEEECCCCcCC-cCchhhccCCCCCEEE
Confidence 3678999999999999999999999999999999999995433 378999999999999998 7888999999999999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSG 235 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g 235 (791)
|++|+|++..|..|.++++|++|+|++|+|++..+..| ++|+.|+|++|+|++..+..+.. .+|++|+|++|+|+
T Consensus 107 l~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~L~~N~l~- 185 (290)
T 1p9a_G 107 VSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLEKLSLANNNLTELPAGLLNGLENLDTLLLQENSLY- 185 (290)
T ss_dssp CCSSCCCCCCSSTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCSCCCTTTTTTCTTCCEEECCSSCCC-
T ss_pred CCCCcCcccCHHHHcCCCCCCEEECCCCCCCccChhhcccccCCCEEECCCCcCCccCHHHhcCcCCCCEEECCCCcCC-
Confidence 99999998888899999999999999999998777554 78999999999999655555554 68999999999999
Q ss_pred cCchhHhhcCCCCcEEEcccCcCcccC
Q 003847 236 EIPPQFGEKIPVNATIDLSFNNLTGEI 262 (791)
Q Consensus 236 ~ip~~~~~~l~~l~~l~l~~N~l~~~~ 262 (791)
.+|..++. +.+|+.|+|++|++.+..
T Consensus 186 ~ip~~~~~-~~~L~~l~L~~Np~~C~c 211 (290)
T 1p9a_G 186 TIPKGFFG-SHLLPFAFLHGNPWLCNC 211 (290)
T ss_dssp CCCTTTTT-TCCCSEEECCSCCBCCSG
T ss_pred ccChhhcc-cccCCeEEeCCCCccCcC
Confidence 99999987 889999999999998764
No 282
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.88 E-value=8.7e-22 Score=211.84 Aligned_cols=213 Identities=21% Similarity=0.248 Sum_probs=148.9
Q ss_pred CCceeeeeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEcc
Q 003847 62 NPCSWNGVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLS 137 (791)
Q Consensus 62 ~~c~w~gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 137 (791)
..|.|..+.|...+- ..-...++.|+|++|++++..+..|+++++|++|+|++|+|++..|..|.++++|++|+|+
T Consensus 29 c~c~l~~l~~~~~~l~~lp~~~~~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls 108 (330)
T 1xku_A 29 CQCHLRVVQCSDLGLEKVPKDLPPDTALLDLQNNKITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLS 108 (330)
T ss_dssp CEEETTEEECTTSCCCSCCCSCCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECC
T ss_pred CcCCCeEEEecCCCccccCccCCCCCeEEECCCCcCCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECC
Confidence 347899999973221 1123578999999999999888899999999999999999998889999999999999999
Q ss_pred CCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCC--CCCCCC---cccceeccccccccc
Q 003847 138 NNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSD--GLPSKF---NSVQVLDLSSNLING 212 (791)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l---~~L~~L~ls~N~l~~ 212 (791)
+|+|+ .+|..+. ++|++|+|++|++++..+..|.++++|+.|+|++|.++. ..+..+ ++|++|+|++|.++
T Consensus 109 ~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~- 184 (330)
T 1xku_A 109 KNQLK-ELPEKMP--KTLQELRVHENEITKVRKSVFNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNIT- 184 (330)
T ss_dssp SSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHHHTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCC-
T ss_pred CCcCC-ccChhhc--ccccEEECCCCcccccCHhHhcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccc-
Confidence 99998 5665554 677788888887776666667777777777777777753 333333 56666666666666
Q ss_pred cCCCCcCCccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCC
Q 003847 213 SLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNL 280 (791)
Q Consensus 213 ~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~ 280 (791)
.+|..+. .+|++|+|++|++++..|..+.. +++|+.|+|++|++++..+.. ..+.++..+.+.+|.
T Consensus 185 ~l~~~~~-~~L~~L~l~~n~l~~~~~~~~~~-l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~ 251 (330)
T 1xku_A 185 TIPQGLP-PSLTELHLDGNKITKVDAASLKG-LNNLAKLGLSFNSISAVDNGSLANTPHLRELHLNNNK 251 (330)
T ss_dssp SCCSSCC-TTCSEEECTTSCCCEECTGGGTT-CTTCCEEECCSSCCCEECTTTGGGSTTCCEEECCSSC
T ss_pred cCCcccc-ccCCEEECCCCcCCccCHHHhcC-CCCCCEEECCCCcCceeChhhccCCCCCCEEECCCCc
Confidence 3444333 45666666666666444444443 666666666666666555533 233344555555553
No 283
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.88 E-value=2.6e-22 Score=237.82 Aligned_cols=211 Identities=19% Similarity=0.175 Sum_probs=158.0
Q ss_pred CCCCCCcEEEEEcCCCCCccCCC-cCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCC--CCCccccCCC
Q 003847 76 EGNNDSRVIGLALPNSQLLGSIP-ADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLIS--GHLPETMGSL 152 (791)
Q Consensus 76 ~~~~~~~v~~L~L~~~~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~--~~~p~~~~~l 152 (791)
.+....+++.|+|++|.+.+.+| ..|..+++|++|+|++|++.+..+..|..+++|+.|+|++|.++ +.+|..|.++
T Consensus 400 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~p~~~~~l 479 (680)
T 1ziw_A 400 AFSWLGHLEVLDLGLNEIGQELTGQEWRGLENIFEIYLSYNKYLQLTRNSFALVPSLQRLMLRRVALKNVDSSPSPFQPL 479 (680)
T ss_dssp TTTTCTTCCEEECCSSCCEEECCSGGGTTCTTCCEEECCSCSEEECCTTTTTTCTTCCEEECTTSCCBCTTCSSCTTTTC
T ss_pred hhhCCCCCCEEeCCCCcCccccCcccccCcccccEEecCCCCcceeChhhhhcCcccccchhccccccccccCCcccccC
Confidence 34445555666666666655444 45556666666666666665555566666666666666666665 4678888889
Q ss_pred CCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC-----------CCCcccceeccccccccccCCCCcCC-
Q 003847 153 HNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP-----------SKFNSVQVLDLSSNLINGSLPPDIGG- 220 (791)
Q Consensus 153 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-----------~~l~~L~~L~ls~N~l~~~~p~~~~~- 220 (791)
++|+.|+|++|+|++..+..|.++++|++|+|++|++++..+ ..+++|+.|+|++|+|+...+..+..
T Consensus 480 ~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l 559 (680)
T 1ziw_A 480 RNLTILDLSNNNIANINDDMLEGLEKLEILDLQHNNLARLWKHANPGGPIYFLKGLSHLHILNLESNGFDEIPVEVFKDL 559 (680)
T ss_dssp TTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCGGGGSTTSTTSCCCTTTTCTTCCEEECCSSCCCCCCTTTTTTC
T ss_pred CCCCEEECCCCCCCcCChhhhccccccCEEeCCCCCccccchhhccCCcchhhcCCCCCCEEECCCCCCCCCCHHHcccc
Confidence 999999999999998777888999999999999999886421 23478999999999998443345665
Q ss_pred ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCC--cccccccccccCCCCCCCCCC
Q 003847 221 YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESN--VFMNQESSSFSGNLDLCGQPT 287 (791)
Q Consensus 221 ~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~--~~~~~~~~~~~~n~~lc~~~~ 287 (791)
.+|++|+|++|+|+ .+|...+..+++|+.|+|++|+|++..|... .+.++..+.+.+|||.|+|+.
T Consensus 560 ~~L~~L~Ls~N~l~-~l~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~l~l~~N~~~c~c~~ 627 (680)
T 1ziw_A 560 FELKIIDLGLNNLN-TLPASVFNNQVSLKSLNLQKNLITSVEKKVFGPAFRNLTELDMRFNPFDCTCES 627 (680)
T ss_dssp TTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECTTSCCCBCCHHHHHHHHTTCSEEECTTCCCCBCCCC
T ss_pred cCcceeECCCCCCC-cCCHhHhCCCCCCCEEECCCCcCCccChhHhcccccccCEEEccCCCcccCCcc
Confidence 58999999999999 7777776669999999999999998777543 467788899999999998764
No 284
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.88 E-value=1e-21 Score=211.55 Aligned_cols=213 Identities=19% Similarity=0.222 Sum_probs=154.6
Q ss_pred CceeeeeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccC
Q 003847 63 PCSWNGVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSN 138 (791)
Q Consensus 63 ~c~w~gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~ 138 (791)
.|.|..+.|...+- .....+++.|+|++|++.+..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 32 ~c~l~~l~~~~~~l~~ip~~~~~~l~~L~l~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~ 111 (332)
T 2ft3_A 32 HCHLRVVQCSDLGLKAVPKEISPDTTLLDLQNNDISELRKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISK 111 (332)
T ss_dssp EEETTEEECCSSCCSSCCSCCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCS
T ss_pred cccCCEEECCCCCccccCCCCCCCCeEEECCCCcCCccCHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCC
Confidence 37899999973221 11235789999999999988888999999999999999999988899999999999999999
Q ss_pred CcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCC--CCCCCC-------------------
Q 003847 139 NLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSD--GLPSKF------------------- 197 (791)
Q Consensus 139 N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~l------------------- 197 (791)
|+|+ .+|..+. ++|++|+|++|++++..+..|.++++|+.|+|++|.++. ..+..+
T Consensus 112 n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~ 188 (332)
T 2ft3_A 112 NHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGLRNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIP 188 (332)
T ss_dssp SCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSCSSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCC
T ss_pred CcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCCccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccC
Confidence 9998 6666555 788888888888887666678888888888888888853 334333
Q ss_pred ----cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-Cccccc
Q 003847 198 ----NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQ 271 (791)
Q Consensus 198 ----~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~ 271 (791)
++|+.|+|++|++++..+..+.. .+|++|+|++|+|++..|..+.. +++|+.|+|++|+++ .+|.. ..+.++
T Consensus 189 ~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~-~lp~~l~~l~~L 266 (332)
T 2ft3_A 189 KDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGHNQIRMIENGSLSF-LPTLRELHLDNNKLS-RVPAGLPDLKLL 266 (332)
T ss_dssp SSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCSSCCCCCCTTGGGG-CTTCCEEECCSSCCC-BCCTTGGGCTTC
T ss_pred ccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCCCcCCcCChhHhhC-CCCCCEEECCCCcCe-ecChhhhcCccC
Confidence 35666666666666555555554 46777777777776444444443 677777777777776 44443 334455
Q ss_pred ccccccCCC
Q 003847 272 ESSSFSGNL 280 (791)
Q Consensus 272 ~~~~~~~n~ 280 (791)
..+.+.+|.
T Consensus 267 ~~L~l~~N~ 275 (332)
T 2ft3_A 267 QVVYLHTNN 275 (332)
T ss_dssp CEEECCSSC
T ss_pred CEEECCCCC
Confidence 555555554
No 285
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.87 E-value=7.6e-22 Score=221.14 Aligned_cols=188 Identities=26% Similarity=0.250 Sum_probs=135.7
Q ss_pred EEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcC
Q 003847 86 LALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNAL 165 (791)
Q Consensus 86 L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l 165 (791)
++..+++|+ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 48 v~c~~~~l~-~iP~~~~--~~l~~L~L~~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l 124 (440)
T 3zyj_A 48 VICVRKNLR-EVPDGIS--TNTRLLNLHENQIQIIKVNSFKHLRHLEILQLSRNHIRTIEIGAFNGLANLNTLELFDNRL 124 (440)
T ss_dssp EECCSCCCS-SCCSCCC--TTCSEEECCSCCCCEECTTTTSSCSSCCEEECCSSCCCEECGGGGTTCSSCCEEECCSSCC
T ss_pred EEeCCCCcC-cCCCCCC--CCCcEEEccCCcCCeeCHHHhhCCCCCCEEECCCCcCCccChhhccCCccCCEEECCCCcC
Confidence 444455665 5666554 7899999999999988889999999999999999999988889999999999999999999
Q ss_pred CCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCC-CcCC-ccccEEEccCCcCcccCchh
Q 003847 166 AGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPP-DIGG-YSLRYLNLSYNRLSGEIPPQ 240 (791)
Q Consensus 166 ~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~-~~~~-~~L~~L~l~~N~l~g~ip~~ 240 (791)
++..+..|.++++|++|+|++|+|+...+..| ++|+.|+|++|...+.++. .+.. .+|++|+|++|+|+ .+|.
T Consensus 125 ~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~~~~l~~i~~~~~~~l~~L~~L~L~~n~l~-~~~~- 202 (440)
T 3zyj_A 125 TTIPNGAFVYLSKLKELWLRNNPIESIPSYAFNRIPSLRRLDLGELKRLSYISEGAFEGLSNLRYLNLAMCNLR-EIPN- 202 (440)
T ss_dssp SSCCTTTSCSCSSCCEEECCSCCCCEECTTTTTTCTTCCEEECCCCTTCCEECTTTTTTCSSCCEEECTTSCCS-SCCC-
T ss_pred CeeCHhHhhccccCceeeCCCCcccccCHHHhhhCcccCEeCCCCCCCcceeCcchhhcccccCeecCCCCcCc-cccc-
Confidence 97777789999999999999999987655433 5677777776433223333 3443 35666666666666 5553
Q ss_pred HhhcCCCCcEEEcccCcCcccCCCCC-cccccccccccCC
Q 003847 241 FGEKIPVNATIDLSFNNLTGEIPESN-VFMNQESSSFSGN 279 (791)
Q Consensus 241 ~~~~l~~l~~l~l~~N~l~~~~p~~~-~~~~~~~~~~~~n 279 (791)
+.. +++|+.|+|++|++++..|... .+.++..+.+.+|
T Consensus 203 ~~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n 241 (440)
T 3zyj_A 203 LTP-LIKLDELDLSGNHLSAIRPGSFQGLMHLQKLWMIQS 241 (440)
T ss_dssp CTT-CSSCCEEECTTSCCCEECTTTTTTCTTCCEEECTTC
T ss_pred cCC-CcccCEEECCCCccCccChhhhccCccCCEEECCCC
Confidence 222 5666666666666665555432 2333444444444
No 286
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.87 E-value=1.4e-22 Score=236.86 Aligned_cols=209 Identities=22% Similarity=0.166 Sum_probs=182.8
Q ss_pred CCCCCcEEEEEcCCCCCccC--CCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCc-cccCCCC
Q 003847 77 GNNDSRVIGLALPNSQLLGS--IPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLP-ETMGSLH 153 (791)
Q Consensus 77 ~~~~~~v~~L~L~~~~l~~~--~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~ 153 (791)
+....+++.|+|++|++++. ++..+..+++|++|+|++|.+++ +|..|.++++|+.|+|++|++++..| ..|.+++
T Consensus 346 ~~~l~~L~~L~ls~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 424 (606)
T 3vq2_A 346 KVALPSLSYLDLSRNALSFSGCCSYSDLGTNSLRHLDLSFNGAII-MSANFMGLEELQHLDFQHSTLKRVTEFSAFLSLE 424 (606)
T ss_dssp CCCCTTCCEEECCSSCEEEEEECCHHHHCCSCCCEEECCSCSEEE-ECCCCTTCTTCCEEECTTSEEESTTTTTTTTTCT
T ss_pred hccCCCCCEEECcCCccCCCcchhhhhccCCcccEeECCCCcccc-chhhccCCCCCCeeECCCCccCCccChhhhhccc
Confidence 34567888999999999877 47889999999999999999984 66889999999999999999998877 6899999
Q ss_pred CCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCC-CCCCC---cccceeccccccccccCCCCcCC-ccccEEEc
Q 003847 154 NLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDG-LPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNL 228 (791)
Q Consensus 154 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l 228 (791)
+|++|+|++|++++..|..|.++++|++|+|++|++++. +|..+ ++|+.|+|++|++++..|..+.. .+|++|+|
T Consensus 425 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L 504 (606)
T 3vq2_A 425 KLLYLDISYTNTKIDFDGIFLGLTSLNTLKMAGNSFKDNTLSNVFANTTNLTFLDLSKCQLEQISWGVFDTLHRLQLLNM 504 (606)
T ss_dssp TCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCEEECcCCCCCccchhhhcCCCCCCEEECCCCcCCCcchHHhhccCCCCCEEECCCCcCCccChhhhcccccCCEEEC
Confidence 999999999999999999999999999999999999984 66655 78999999999999988888877 58999999
Q ss_pred cCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-Cccc-ccccccccCCCCCCCCCCC
Q 003847 229 SYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFM-NQESSSFSGNLDLCGQPTK 288 (791)
Q Consensus 229 ~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~-~~~~~~~~~n~~lc~~~~~ 288 (791)
++|++++.+|..+.. +++|+.|+|++|+|+. +|.. ..+. .+..+.+.+|++.|+|++.
T Consensus 505 s~N~l~~~~~~~~~~-l~~L~~L~l~~N~l~~-~p~~~~~l~~~L~~l~l~~N~~~c~c~~~ 564 (606)
T 3vq2_A 505 SHNNLLFLDSSHYNQ-LYSLSTLDCSFNRIET-SKGILQHFPKSLAFFNLTNNSVACICEHQ 564 (606)
T ss_dssp CSSCCSCEEGGGTTT-CTTCCEEECTTSCCCC-EESCGGGSCTTCCEEECCSCCCCCSSTTH
T ss_pred CCCcCCCcCHHHccC-CCcCCEEECCCCcCcc-cCHhHhhhcccCcEEEccCCCcccCCccH
Confidence 999999877888776 9999999999999994 5544 3333 4788899999999988753
No 287
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.87 E-value=2.8e-22 Score=200.55 Aligned_cols=177 Identities=24% Similarity=0.248 Sum_probs=115.4
Q ss_pred CCceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcC
Q 003847 62 NPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLI 141 (791)
Q Consensus 62 ~~c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 141 (791)
..|+|.+|.|.. ++++ .+|..+ .++|++|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 5 C~C~~~~v~c~~-----------------~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 64 (208)
T 2o6s_A 5 CSCSGTTVECYS-----------------QGRT-SVPTGI--PAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKL 64 (208)
T ss_dssp CEEETTEEECCS-----------------SCCS-SCCSCC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCC
T ss_pred CEECCCEEEecC-----------------CCcc-CCCCCC--CCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCcc
Confidence 458999999972 2222 223222 34667777777777655555566677777777777777
Q ss_pred CCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCc
Q 003847 142 SGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDI 218 (791)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~ 218 (791)
++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..| ++|+.|+|++|+|++..+..+
T Consensus 65 ~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~ 144 (208)
T 2o6s_A 65 QSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVF 144 (208)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTT
T ss_pred CccChhhcCCCCCcCEEECCCCcCCccCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHh
Confidence 65555556667777777777777765555556667777777777777766554433 567777777777765544445
Q ss_pred CC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCC
Q 003847 219 GG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESN 266 (791)
Q Consensus 219 ~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~ 266 (791)
.. .+|++|+|++|.+.+. +++|++|+++.|+++|.+|+..
T Consensus 145 ~~l~~L~~L~l~~N~~~~~--------~~~l~~L~~~~n~~~g~ip~~~ 185 (208)
T 2o6s_A 145 DRLTSLQYIWLHDNPWDCT--------CPGIRYLSEWINKHSGVVRNSA 185 (208)
T ss_dssp TTCTTCCEEECCSCCBCCC--------TTTTHHHHHHHHHCTTTBBCTT
T ss_pred ccCCCccEEEecCCCeecC--------CCCHHHHHHHHHhCCceeeccC
Confidence 54 4778888888877643 4567777888888888887653
No 288
>3oja_B Anopheles plasmodium-responsive leucine-rich REPE 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.87 E-value=5.8e-22 Score=230.79 Aligned_cols=212 Identities=20% Similarity=0.125 Sum_probs=167.0
Q ss_pred eeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccc
Q 003847 69 VTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPET 148 (791)
Q Consensus 69 v~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 148 (791)
++-..+..+....+++.|+|++|.+++..|..|+.+++|++|+|++|.|++..+..|.++++|++|+|++|.|++..|..
T Consensus 87 l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~Ls~N~l~~~~~~~ 166 (597)
T 3oja_B 87 IEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDT 166 (597)
T ss_dssp CCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTT
T ss_pred CCCCChHHhcCCCCCCEEECCCCcCCCCCHHHHcCCCCCCEEEeeCCCCCCCCHHHhccCCCCCEEEeeCCcCCCCChhh
Confidence 33334456677889999999999999988888999999999999999999766666789999999999999999888888
Q ss_pred cCCCCCCCEEeCcCCcCCCCCcc---------------------------------------------------------
Q 003847 149 MGSLHNLQLLNLSDNALAGKLPV--------------------------------------------------------- 171 (791)
Q Consensus 149 ~~~l~~L~~L~ls~N~l~~~~p~--------------------------------------------------------- 171 (791)
|+++++|++|+|++|.|++..+.
T Consensus 167 ~~~l~~L~~L~L~~N~l~~~~~~~l~~L~~L~l~~n~l~~l~~~~~L~~L~ls~n~l~~~~~~~~~~L~~L~L~~n~l~~ 246 (597)
T 3oja_B 167 FQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTD 246 (597)
T ss_dssp TTTCTTCCEEECTTSCCSBCCGGGCTTCSEEECCSSCCSEEECCTTCSEEECCSSCCCEEECSCCSCCCEEECCSSCCCC
T ss_pred hhcCCcCcEEECcCCCCCCcChhhhhhhhhhhcccCccccccCCchhheeeccCCcccccccccCCCCCEEECCCCCCCC
Confidence 99999999999999988754322
Q ss_pred --ccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcC
Q 003847 172 --SLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKI 245 (791)
Q Consensus 172 --~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l 245 (791)
.+..+++|+.|+|++|.|++.+|..| ++|+.|+|++|.|++ +|..+.. .+|++|+|++|.|+ .+|..+.. +
T Consensus 247 ~~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~-l~~~~~~l~~L~~L~Ls~N~l~-~i~~~~~~-l 323 (597)
T 3oja_B 247 TAWLLNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQ-F 323 (597)
T ss_dssp CGGGGGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECTTSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHH-H
T ss_pred ChhhccCCCCCEEECCCCccCCCCHHHhcCccCCCEEECCCCCCCC-CCcccccCCCCcEEECCCCCCC-ccCccccc-C
Confidence 24556677777777777777666544 678888888888875 4544443 57888888888888 78877766 8
Q ss_pred CCCcEEEcccCcCcccCCCCCcccccccccccCCCCCCCC
Q 003847 246 PVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCGQ 285 (791)
Q Consensus 246 ~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 285 (791)
++|++|+|++|+|++.. ...+..+..+.+.+|++.|.+
T Consensus 324 ~~L~~L~L~~N~l~~~~--~~~~~~L~~L~l~~N~~~~~~ 361 (597)
T 3oja_B 324 DRLENLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNS 361 (597)
T ss_dssp TTCSEEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHH
T ss_pred CCCCEEECCCCCCCCcC--hhhcCCCCEEEeeCCCCCChh
Confidence 88888888888887653 334557777888899888864
No 289
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.87 E-value=6.4e-23 Score=232.36 Aligned_cols=198 Identities=26% Similarity=0.241 Sum_probs=142.6
Q ss_pred cEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCcc--------------
Q 003847 82 RVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPE-------------- 147 (791)
Q Consensus 82 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-------------- 147 (791)
+|+.|+|++|++++..|..|+.+++|++|+|++|.|++..| |.++++|++|+|++|.|++..+.
T Consensus 35 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~ 112 (487)
T 3oja_A 35 NVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNIS 112 (487)
T ss_dssp GCCEEECCSSCCCCCCGGGGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCC
T ss_pred CccEEEeeCCcCCCCCHHHHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCC
Confidence 56666666666666555666666666666666666665443 55666666666555555432111
Q ss_pred --ccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC----cccceeccccccccccCCCCcCCc
Q 003847 148 --TMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF----NSVQVLDLSSNLINGSLPPDIGGY 221 (791)
Q Consensus 148 --~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l----~~L~~L~ls~N~l~~~~p~~~~~~ 221 (791)
....+++|+.|+|++|.|++..|..|.++++|+.|+|++|.|++.+|..+ ++|+.|+|++|.|++. |......
T Consensus 113 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~-~~~~~l~ 191 (487)
T 3oja_A 113 RVSCSRGQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFA 191 (487)
T ss_dssp CEEECCCSSCEEEECCSSCCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCT
T ss_pred CCCccccCCCCEEECCCCCCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccc-cccccCC
Confidence 01245778888888999888888888889999999999999998776644 6899999999999865 4444456
Q ss_pred cccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCCCC
Q 003847 222 SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCG 284 (791)
Q Consensus 222 ~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~ 284 (791)
+|++|+|++|.|++ +|..+.. +++|+.|+|++|+|++..+....+.++..+.+.+|++.|+
T Consensus 192 ~L~~L~Ls~N~l~~-~~~~~~~-l~~L~~L~Ls~N~l~~lp~~l~~l~~L~~L~l~~N~l~c~ 252 (487)
T 3oja_A 192 KLKTLDLSSNKLAF-MGPEFQS-AAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (487)
T ss_dssp TCCEEECCSSCCCE-ECGGGGG-GTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCBCHH
T ss_pred CCCEEECCCCCCCC-CCHhHcC-CCCccEEEecCCcCcccchhhccCCCCCEEEcCCCCCcCc
Confidence 89999999999994 5556665 8999999999999997544445556778888889988886
No 290
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.87 E-value=2.2e-22 Score=235.23 Aligned_cols=208 Identities=21% Similarity=0.204 Sum_probs=166.5
Q ss_pred CCCCCcEEEEEcCCCCCccCC--CcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccc-cCCCC
Q 003847 77 GNNDSRVIGLALPNSQLLGSI--PADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPET-MGSLH 153 (791)
Q Consensus 77 ~~~~~~v~~L~L~~~~l~~~~--~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~-~~~l~ 153 (791)
+....+++.|+|++|++.+.. +..+..+++|++|+|++|++.+..|..|.++++|++|+|++|++++..|.. |.+++
T Consensus 346 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~ 425 (606)
T 3t6q_A 346 LENLENLRELDLSHDDIETSDCCNLQLRNLSHLQSLNLSYNEPLSLKTEAFKECPQLELLDLAFTRLKVKDAQSPFQNLH 425 (606)
T ss_dssp TTTCTTCCEEECCSSCCCEEEESTTTTTTCTTCCEEECCSCSCEEECTTTTTTCTTCSEEECTTCCEECCTTCCTTTTCT
T ss_pred hhccCcCCEEECCCCccccccCcchhcccCCCCCEEECCCCcCCcCCHHHhcCCccCCeEECCCCcCCCcccchhhhCcc
Confidence 445667777777777777665 667777888888888888887777777888888888888888887666544 78888
Q ss_pred CCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCC-C--C---CCcccceeccccccccccCCCCcCC-ccccEE
Q 003847 154 NLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGL-P--S---KFNSVQVLDLSSNLINGSLPPDIGG-YSLRYL 226 (791)
Q Consensus 154 ~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p--~---~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L 226 (791)
+|+.|+|++|.+++..|..|..+++|++|+|++|++++.. + . .+++|+.|+|++|++++..|..+.. .+|++|
T Consensus 426 ~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L 505 (606)
T 3t6q_A 426 LLKVLNLSHSLLDISSEQLFDGLPALQHLNLQGNHFPKGNIQKTNSLQTLGRLEILVLSFCDLSSIDQHAFTSLKMMNHV 505 (606)
T ss_dssp TCCEEECTTCCCBTTCTTTTTTCTTCCEEECTTCBCGGGEECSSCGGGGCTTCCEEECTTSCCCEECTTTTTTCTTCCEE
T ss_pred cCCEEECCCCccCCcCHHHHhCCCCCCEEECCCCCCCccccccchhhccCCCccEEECCCCccCccChhhhccccCCCEE
Confidence 8888888888888888888888888888888888887632 2 2 3478999999999999888888876 589999
Q ss_pred EccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCCCCCCC
Q 003847 227 NLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLDLCGQP 286 (791)
Q Consensus 227 ~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~ 286 (791)
+|++|++++..|..+.. +++| +|+|++|++++.+|.. ..+..+..+.+.+|++.|+|+
T Consensus 506 ~Ls~N~l~~~~~~~l~~-l~~L-~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 564 (606)
T 3t6q_A 506 DLSHNRLTSSSIEALSH-LKGI-YLNLASNHISIILPSLLPILSQQRTINLRQNPLDCTCS 564 (606)
T ss_dssp ECCSSCCCGGGGGGGTT-CCSC-EEECCSSCCCCCCGGGHHHHHTSSEEECTTCCEECSGG
T ss_pred ECCCCccCcCChhHhCc-cccc-EEECcCCcccccCHhhcccCCCCCEEeCCCCCccccCC
Confidence 99999999888877766 9999 9999999999887765 345677889999999999765
No 291
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.87 E-value=4.4e-22 Score=219.39 Aligned_cols=129 Identities=20% Similarity=0.089 Sum_probs=93.2
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|+|++|++.+..+..|..+++|++|+|++|+|++..|..|.++++|++|+|++|+|+...+..|.++++|++|+
T Consensus 68 l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 147 (390)
T 3o6n_A 68 FRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLS 147 (390)
T ss_dssp CCCCSEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEE
T ss_pred cccCcEEECCCCcccccChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEE
Confidence 34667777888888777777788888888888888888877777778888888888888888744444467788888888
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSN 208 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N 208 (791)
|++|++++..|..|.++++|++|+|++|++++.....+++|+.|++++|
T Consensus 148 L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n 196 (390)
T 3o6n_A 148 MSNNNLERIEDDTFQATTSLQNLQLSSNRLTHVDLSLIPSLFHANVSYN 196 (390)
T ss_dssp CCSSCCCBCCTTTTSSCTTCCEEECCSSCCSBCCGGGCTTCSEEECCSS
T ss_pred CCCCccCccChhhccCCCCCCEEECCCCcCCccccccccccceeecccc
Confidence 8888888777777888888888888888877654443444433333333
No 292
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.87 E-value=4e-22 Score=230.10 Aligned_cols=197 Identities=19% Similarity=0.228 Sum_probs=174.1
Q ss_pred CceeeeeeeCCCCC-C-----CCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEc
Q 003847 63 PCSWNGVTCASPGE-G-----NNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDL 136 (791)
Q Consensus 63 ~c~w~gv~C~~~~~-~-----~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L 136 (791)
.|.|.|+ |+.... . ....+++.|+|++|++++..|..|..+++|++|+|++|+|++..|..|.++++|++|+|
T Consensus 3 ~C~~~~~-c~~~~~~l~~ip~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L 81 (549)
T 2z81_A 3 SCDASGV-CDGRSRSFTSIPSGLTAAMKSLDLSFNKITYIGHGDLRACANLQVLILKSSRINTIEGDAFYSLGSLEHLDL 81 (549)
T ss_dssp EECTTSE-EECTTSCCSSCCSCCCTTCCEEECCSSCCCEECSSTTSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEC
T ss_pred cCCCCce-EECCCCccccccccCCCCccEEECcCCccCccChhhhhcCCcccEEECCCCCcCccChhhccccccCCEEEC
Confidence 5889998 863221 1 12358999999999999999999999999999999999999888899999999999999
Q ss_pred cCCcCCCCCccccCCCCCCCEEeCcCCcCCC-CCccccCCCCCCCEEeCCCCcCCCCCC-CC---Ccccceecccccccc
Q 003847 137 SNNLISGHLPETMGSLHNLQLLNLSDNALAG-KLPVSLTTLQSLTIVSLKNNYFSDGLP-SK---FNSVQVLDLSSNLIN 211 (791)
Q Consensus 137 ~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~---l~~L~~L~ls~N~l~ 211 (791)
++|+|++..|..|+++++|++|+|++|++++ ..|..|.++++|++|+|++|++.+.+| .. +++|++|+|++|+++
T Consensus 82 s~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~l~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~L~~n~l~ 161 (549)
T 2z81_A 82 SDNHLSSLSSSWFGPLSSLKYLNLMGNPYQTLGVTSLFPNLTNLQTLRIGNVETFSEIRRIDFAGLTSLNELEIKALSLR 161 (549)
T ss_dssp TTSCCCSCCHHHHTTCTTCCEEECTTCCCSSSCSSCSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCC
T ss_pred CCCccCccCHHHhccCCCCcEEECCCCcccccchhhhhhccCCccEEECCCCccccccCHhhhhcccccCeeeccCCccc
Confidence 9999998888889999999999999999997 357889999999999999999655554 33 478999999999999
Q ss_pred ccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCccc
Q 003847 212 GSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGE 261 (791)
Q Consensus 212 ~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~ 261 (791)
+.+|..+.. .+|++|++++|.+. .+|..+...+++|++|+|++|++++.
T Consensus 162 ~~~~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~l~~L~~L~L~~n~l~~~ 211 (549)
T 2z81_A 162 NYQSQSLKSIRDIHHLTLHLSESA-FLLEIFADILSSVRYLELRDTNLARF 211 (549)
T ss_dssp EECTTTTTTCSEEEEEEEECSBST-THHHHHHHSTTTBSEEEEESCBCTTC
T ss_pred ccChhhhhccccCceEecccCccc-ccchhhHhhcccccEEEccCCccccc
Confidence 999999887 58999999999997 78888877799999999999999985
No 293
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=1.7e-21 Score=203.40 Aligned_cols=180 Identities=22% Similarity=0.206 Sum_probs=139.6
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|++++|++... +.+..+++|++|+|++|+|++. ..+.++++|++|+|++|+|++..+..|.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~~--~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~ 115 (272)
T 3rfs_A 40 LNSIDQIIANNSDIKSV--QGIQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELV 115 (272)
T ss_dssp HTTCCEEECTTSCCCCC--TTGGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEE
T ss_pred ccceeeeeeCCCCcccc--cccccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEE
Confidence 45778888888887642 3577888888888888888753 3678888888888888888877777788888888888
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSG 235 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g 235 (791)
|++|++++..+..|.++++|++|+|++|+|++..+..| ++|+.|+|++|+|++..+..+.. .+|++|+|++|+|++
T Consensus 116 L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~ 195 (272)
T 3rfs_A 116 LVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKS 195 (272)
T ss_dssp CTTSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSC
T ss_pred CCCCcCCccCHHHhccCCCCCEEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCc
Confidence 88888887777778888888888888888887666443 67888888888888666665655 578888888888885
Q ss_pred cCchhHhhcCCCCcEEEcccCcCcccCCC
Q 003847 236 EIPPQFGEKIPVNATIDLSFNNLTGEIPE 264 (791)
Q Consensus 236 ~ip~~~~~~l~~l~~l~l~~N~l~~~~p~ 264 (791)
..|..+. .+++|+.|+|++|+++|.+|.
T Consensus 196 ~~~~~~~-~l~~L~~L~l~~N~~~~~~~~ 223 (272)
T 3rfs_A 196 VPDGVFD-RLTSLQYIWLHDNPWDCTCPG 223 (272)
T ss_dssp CCTTTTT-TCTTCCEEECCSSCBCCCTTT
T ss_pred cCHHHHh-CCcCCCEEEccCCCccccCcH
Confidence 4444444 488888888888888877764
No 294
>3o6n_A APL1; leucine-rich repeat, protein binding; HET: NAG; 1.85A {Anopheles gambiae}
Probab=99.87 E-value=1.1e-21 Score=216.26 Aligned_cols=208 Identities=20% Similarity=0.128 Sum_probs=156.9
Q ss_pred CCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCC
Q 003847 73 SPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSL 152 (791)
Q Consensus 73 ~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 152 (791)
.+..+....+++.|+|++|++.+..|..|+.+++|++|+|++|+|+...+..|.++++|++|+|++|+|++..|..|.++
T Consensus 85 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l 164 (390)
T 3o6n_A 85 DTYAFAYAHTIQKLYMGFNAIRYLPPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQAT 164 (390)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCBCCTTTTSSC
T ss_pred ChhhccCCCCcCEEECCCCCCCcCCHHHhcCCCCCCEEECCCCccCcCCHHHhcCCCCCcEEECCCCccCccChhhccCC
Confidence 34456677889999999999988888888999999999999999985555557888999999999999987778888888
Q ss_pred CCCCEEeCcCCcCCCCCcc-----------------------------------------------------------cc
Q 003847 153 HNLQLLNLSDNALAGKLPV-----------------------------------------------------------SL 173 (791)
Q Consensus 153 ~~L~~L~ls~N~l~~~~p~-----------------------------------------------------------~~ 173 (791)
++|++|+|++|++++.... .+
T Consensus 165 ~~L~~L~l~~n~l~~~~~~~l~~L~~L~l~~n~l~~~~~~~~L~~L~l~~n~l~~~~~~~~~~L~~L~l~~n~l~~~~~l 244 (390)
T 3o6n_A 165 TSLQNLQLSSNRLTHVDLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRGPVNVELTILKLQHNNLTDTAWL 244 (390)
T ss_dssp TTCCEEECCSSCCSBCCGGGCTTCSEEECCSSCCSEEECCSSCSEEECCSSCCCEEECCCCSSCCEEECCSSCCCCCGGG
T ss_pred CCCCEEECCCCcCCccccccccccceeecccccccccCCCCcceEEECCCCeeeeccccccccccEEECCCCCCcccHHH
Confidence 8999999888888753222 23
Q ss_pred CCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCc
Q 003847 174 TTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNA 249 (791)
Q Consensus 174 ~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~ 249 (791)
..+++|++|+|++|.+++..|..| ++|+.|+|++|+|++ +|..+.. .+|++|+|++|+|+ .+|..+.. +++|+
T Consensus 245 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~-~~~~~~~l~~L~~L~L~~n~l~-~~~~~~~~-l~~L~ 321 (390)
T 3o6n_A 245 LNYPGLVEVDLSYNELEKIMYHPFVKMQRLERLYISNNRLVA-LNLYGQPIPTLKVLDLSHNHLL-HVERNQPQ-FDRLE 321 (390)
T ss_dssp GGCTTCSEEECCSSCCCEEESGGGTTCSSCCEEECCSSCCCE-EECSSSCCTTCCEEECCSSCCC-CCGGGHHH-HTTCS
T ss_pred cCCCCccEEECCCCcCCCcChhHccccccCCEEECCCCcCcc-cCcccCCCCCCCEEECCCCcce-ecCccccc-cCcCC
Confidence 445667777777777776655543 677778888887774 3444433 57888888888887 67777766 88888
Q ss_pred EEEcccCcCcccCCCCCcccccccccccCCCCCCCC
Q 003847 250 TIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCGQ 285 (791)
Q Consensus 250 ~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~ 285 (791)
.|+|++|+++... ...+.++..+.+.+|++.|.+
T Consensus 322 ~L~L~~N~i~~~~--~~~~~~L~~L~l~~N~~~~~~ 355 (390)
T 3o6n_A 322 NLYLDHNSIVTLK--LSTHHTLKNLTLSHNDWDCNS 355 (390)
T ss_dssp EEECCSSCCCCCC--CCTTCCCSEEECCSSCEEHHH
T ss_pred EEECCCCccceeC--chhhccCCEEEcCCCCccchh
Confidence 8888888887553 344566777888888888754
No 295
>3rfs_A Internalin B, repeat modules, variable lymphocyte B; LRR, protein binding, plasma; 1.70A {Listeria monocytogenes} PDB: 3rfj_A
Probab=99.87 E-value=8.4e-22 Score=205.82 Aligned_cols=180 Identities=23% Similarity=0.186 Sum_probs=161.7
Q ss_pred CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCC
Q 003847 77 GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQ 156 (791)
Q Consensus 77 ~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 156 (791)
+....+++.|+|++|++.+. +.+..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|+
T Consensus 59 l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~ 136 (272)
T 3rfs_A 59 IQYLPNVRYLALGGNKLHDI--SALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLT 136 (272)
T ss_dssp GGGCTTCCEEECTTSCCCCC--GGGTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCC
T ss_pred cccCCCCcEEECCCCCCCCc--hhhcCCCCCCEEECCCCccCccChhHhcCCcCCCEEECCCCcCCccCHHHhccCCCCC
Confidence 34467899999999999874 5899999999999999999988888899999999999999999988888899999999
Q ss_pred EEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCC---CcccceeccccccccccCCCCcCC-ccccEEEccCCc
Q 003847 157 LLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSK---FNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNR 232 (791)
Q Consensus 157 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~ 232 (791)
+|+|++|++++..+..|..+++|+.|+|++|+|++..+.. +++|++|+|++|+|++..+..+.. .+|++|+|++|.
T Consensus 137 ~L~L~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~ 216 (272)
T 3rfs_A 137 YLNLAHNQLQSLPKGVFDKLTNLTELDLSYNQLQSLPEGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNP 216 (272)
T ss_dssp EEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEECCCCccCccCHHHhccCccCCEEECCCCCcCccCHHHhcCCccCCEEECCCCcCCccCHHHHhCCcCCCEEEccCCC
Confidence 9999999999888888999999999999999999877754 478999999999999877777766 589999999999
Q ss_pred CcccCchhHhhcCCCCcEEEcccCcCcccCCCCC
Q 003847 233 LSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESN 266 (791)
Q Consensus 233 l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~ 266 (791)
+.+. +++|+.|+++.|+++|.+|...
T Consensus 217 ~~~~--------~~~l~~l~~~~n~~~g~ip~~~ 242 (272)
T 3rfs_A 217 WDCT--------CPGIRYLSEWINKHSGVVRNSA 242 (272)
T ss_dssp BCCC--------TTTTHHHHHHHHHTGGGBBCTT
T ss_pred cccc--------CcHHHHHHHHHHhCCCcccCcc
Confidence 9865 5568889999999999999753
No 296
>2ft3_A Biglycan; proteoglycan, dimer interface, structural protein, signaling; HET: NAG FLC; 3.40A {Bos taurus}
Probab=99.87 E-value=2.2e-21 Score=208.95 Aligned_cols=206 Identities=21% Similarity=0.189 Sum_probs=166.5
Q ss_pred CCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCC
Q 003847 73 SPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSL 152 (791)
Q Consensus 73 ~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 152 (791)
.+..+....+++.|+|++|++++..|..|+.+++|++|+|++|+|+ .+|..+. ++|++|+|++|+|++..+..|.++
T Consensus 70 ~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~-~l~~~~~--~~L~~L~l~~n~i~~~~~~~~~~l 146 (332)
T 2ft3_A 70 RKDDFKGLQHLYALVLVNNKISKIHEKAFSPLRKLQKLYISKNHLV-EIPPNLP--SSLVELRIHDNRIRKVPKGVFSGL 146 (332)
T ss_dssp CTTTTTTCTTCCEEECCSSCCCEECGGGSTTCTTCCEEECCSSCCC-SCCSSCC--TTCCEEECCSSCCCCCCSGGGSSC
T ss_pred CHhHhhCCCCCcEEECCCCccCccCHhHhhCcCCCCEEECCCCcCC-ccCcccc--ccCCEEECCCCccCccCHhHhCCC
Confidence 3445677889999999999999998999999999999999999998 5565554 788888888888886666678888
Q ss_pred CCCCEEeCcCCcCC--CCCccccCCC--------------------CCCCEEeCCCCcCCCCCCCCC---cccceecccc
Q 003847 153 HNLQLLNLSDNALA--GKLPVSLTTL--------------------QSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSS 207 (791)
Q Consensus 153 ~~L~~L~ls~N~l~--~~~p~~~~~l--------------------~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~ 207 (791)
++|+.|+|++|.++ +..|..+..+ ++|++|+|++|++++..+..| ++|+.|+|++
T Consensus 147 ~~L~~L~l~~n~l~~~~~~~~~~~~l~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~L~~ 226 (332)
T 2ft3_A 147 RNMNCIEMGGNPLENSGFEPGAFDGLKLNYLRISEAKLTGIPKDLPETLNELHLDHNKIQAIELEDLLRYSKLYRLGLGH 226 (332)
T ss_dssp SSCCEEECCSCCCBGGGSCTTSSCSCCCSCCBCCSSBCSSCCSSSCSSCSCCBCCSSCCCCCCTTSSTTCTTCSCCBCCS
T ss_pred ccCCEEECCCCccccCCCCcccccCCccCEEECcCCCCCccCccccCCCCEEECCCCcCCccCHHHhcCCCCCCEEECCC
Confidence 88888888888885 3555555544 467777777777777666555 7899999999
Q ss_pred ccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCc-------ccccccccccCC
Q 003847 208 NLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNV-------FMNQESSSFSGN 279 (791)
Q Consensus 208 N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~-------~~~~~~~~~~~n 279 (791)
|+|++..+..+.. .+|++|+|++|+|+ .+|..+.. +++|++|+|++|++++..+.... +..+..+.+.+|
T Consensus 227 N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~lp~~l~~-l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~l~~L~l~~N 304 (332)
T 2ft3_A 227 NQIRMIENGSLSFLPTLRELHLDNNKLS-RVPAGLPD-LKLLQVVYLHTNNITKVGVNDFCPVGFGVKRAYYNGISLFNN 304 (332)
T ss_dssp SCCCCCCTTGGGGCTTCCEEECCSSCCC-BCCTTGGG-CTTCCEEECCSSCCCBCCTTSSSCSSCCSSSCCBSEEECCSS
T ss_pred CcCCcCChhHhhCCCCCCEEECCCCcCe-ecChhhhc-CccCCEEECCCCCCCccChhHccccccccccccccceEeecC
Confidence 9999877777766 58999999999999 99998876 99999999999999977665432 344566778888
Q ss_pred CCCC
Q 003847 280 LDLC 283 (791)
Q Consensus 280 ~~lc 283 (791)
++.+
T Consensus 305 ~~~~ 308 (332)
T 2ft3_A 305 PVPY 308 (332)
T ss_dssp SSCG
T ss_pred cccc
Confidence 8764
No 297
>3v47_A TOLL-like receptor 5B and variable lymphocyte REC chimeric protein; innate immunity, leucine-rich repeat, innate immune receptor system; HET: NAG; 2.47A {Danio rerio} PDB: 3v44_A*
Probab=99.87 E-value=9.4e-22 Score=221.39 Aligned_cols=117 Identities=17% Similarity=0.134 Sum_probs=60.9
Q ss_pred CCCCCCcEEEEEcCCCCCccCC-CcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccc--cCCC
Q 003847 76 EGNNDSRVIGLALPNSQLLGSI-PADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPET--MGSL 152 (791)
Q Consensus 76 ~~~~~~~v~~L~L~~~~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l 152 (791)
.+....+++.|+|++|.+.+.+ +..|..+++|++|+|++|+|++..|..|.++++|++|+|++|++++.+|.. |.++
T Consensus 49 ~~~~l~~L~~L~L~~n~~~~~i~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~l 128 (455)
T 3v47_A 49 SFSRLQDLQFLKVEQQTPGLVIRNNTFRGLSSLIILKLDYNQFLQLETGAFNGLANLEVLTLTQCNLDGAVLSGNFFKPL 128 (455)
T ss_dssp TTSSCTTCCEEECCCCSTTCEECTTTTTTCTTCCEEECTTCTTCEECTTTTTTCTTCCEEECTTSCCBTHHHHSSTTTTC
T ss_pred HhccCccccEEECcCCcccceECcccccccccCCEEeCCCCccCccChhhccCcccCCEEeCCCCCCCccccCcccccCc
Confidence 3444555555555555554333 334555555555555555555555555555555555555555555433333 5555
Q ss_pred CCCCEEeCcCCcCCCCCccc-cCCCCCCCEEeCCCCcCCCC
Q 003847 153 HNLQLLNLSDNALAGKLPVS-LTTLQSLTIVSLKNNYFSDG 192 (791)
Q Consensus 153 ~~L~~L~ls~N~l~~~~p~~-~~~l~~L~~L~L~~N~l~~~ 192 (791)
++|++|+|++|++++..|.. |.++++|++|+|++|++++.
T Consensus 129 ~~L~~L~L~~n~l~~~~~~~~~~~l~~L~~L~L~~n~l~~~ 169 (455)
T 3v47_A 129 TSLEMLVLRDNNIKKIQPASFFLNMRRFHVLDLTFNKVKSI 169 (455)
T ss_dssp TTCCEEECCSSBCCSCCCCGGGGGCTTCCEEECTTCCBSCC
T ss_pred ccCCEEECCCCccCccCcccccCCCCcccEEeCCCCccccc
Confidence 55555555555555444443 45555555555555555443
No 298
>3m19_A Variable lymphocyte receptor A diversity region; adaptive immunity, antibody, T cell, leucine-rich repeat, immune system; 1.70A {Petromyzon marinus} PDB: 3m18_A
Probab=99.87 E-value=3e-21 Score=199.13 Aligned_cols=172 Identities=20% Similarity=0.197 Sum_probs=151.5
Q ss_pred eeeeeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCc
Q 003847 65 SWNGVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNL 140 (791)
Q Consensus 65 ~w~gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 140 (791)
.|..+.|....- ..-...++.|+|++|++.+..+..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 15 ~~~~l~~~~~~l~~~p~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~ 94 (251)
T 3m19_A 15 GKKEVDCQGKSLDSVPSGIPADTEKLDLQSTGLATLSDATFRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQ 94 (251)
T ss_dssp GGTEEECTTCCCSSCCSCCCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSCCCCCCTTTTTTCTTCCEEECTTSC
T ss_pred CCeEEecCCCCccccCCCCCCCCCEEEccCCCcCccCHhHhcCcccCCEEECCCCcCCccCHhHhccCCcCCEEECCCCc
Confidence 466777763210 1123578999999999999999999999999999999999999888899999999999999999
Q ss_pred CCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCC
Q 003847 141 ISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPD 217 (791)
Q Consensus 141 l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~ 217 (791)
|++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+..| ++|++|+|++|+|++..+..
T Consensus 95 l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~ 174 (251)
T 3m19_A 95 LASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGA 174 (251)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTT
T ss_pred ccccChhHhcccCCCCEEEcCCCcCCCcChhHhccCCcccEEECcCCcCCccCHHHcCcCcCCCEEECCCCcCCccCHHH
Confidence 998888889999999999999999998777788999999999999999998777555 78999999999999777777
Q ss_pred cCC-ccccEEEccCCcCccc
Q 003847 218 IGG-YSLRYLNLSYNRLSGE 236 (791)
Q Consensus 218 ~~~-~~L~~L~l~~N~l~g~ 236 (791)
+.. .+|++|+|++|.+++.
T Consensus 175 ~~~l~~L~~L~l~~N~~~c~ 194 (251)
T 3m19_A 175 FDRLGKLQTITLFGNQFDCS 194 (251)
T ss_dssp TTTCTTCCEEECCSCCBCTT
T ss_pred HhCCCCCCEEEeeCCceeCC
Confidence 766 5899999999999976
No 299
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.86 E-value=2.3e-22 Score=214.32 Aligned_cols=197 Identities=24% Similarity=0.289 Sum_probs=167.0
Q ss_pred CcEEEEEcCCCCCccCCCcCC--CCCCCCCEEeCcCCCCCCCCc----ccccCCCCccEEEccCCcCCCCCccccCCCCC
Q 003847 81 SRVIGLALPNSQLLGSIPADL--GMIEFLQYLDLSNNSLNGSLS----FSLFNASQLRNLDLSNNLISGHLPETMGSLHN 154 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~--~~l~~L~~L~L~~N~l~~~~p----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 154 (791)
.+++.|+|++|++.+..|..+ ..+++|++|+|++|+|++..+ ..+..+++|++|+|++|+|++..+..|+++++
T Consensus 91 ~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~ 170 (310)
T 4glp_A 91 SRLKELTLEDLKITGTMPPLPLEATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPA 170 (310)
T ss_dssp SCCCEEEEESCCCBSCCCCCSSSCCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTT
T ss_pred CceeEEEeeCCEeccchhhhhhhccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCC
Confidence 359999999999999999998 999999999999999997655 45567999999999999999888899999999
Q ss_pred CCEEeCcCCcCCCC--C--ccccCCCCCCCEEeCCCCcCCCCCC------CCCcccceeccccccccccCCCCcCC----
Q 003847 155 LQLLNLSDNALAGK--L--PVSLTTLQSLTIVSLKNNYFSDGLP------SKFNSVQVLDLSSNLINGSLPPDIGG---- 220 (791)
Q Consensus 155 L~~L~ls~N~l~~~--~--p~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~~L~ls~N~l~~~~p~~~~~---- 220 (791)
|++|+|++|++.+. + +..+..+++|++|+|++|+|+.... ..+++|++|+|++|+|++.+|..+..
T Consensus 171 L~~L~Ls~N~l~~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~ 250 (310)
T 4glp_A 171 LTSLDLSDNPGLGERGLMAALCPHKFPAIQNLALRNTGMETPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWS 250 (310)
T ss_dssp CCEEECCSCTTCHHHHHHTTSCTTSSCCCCSCBCCSSCCCCHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCC
T ss_pred CCEEECCCCCCccchhhhHHHhhhcCCCCCEEECCCCCCCchHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCc
Confidence 99999999998753 2 2334789999999999999974221 23489999999999999887877765
Q ss_pred ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCC
Q 003847 221 YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDL 282 (791)
Q Consensus 221 ~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~l 282 (791)
.+|++|+|++|+|+ .+|..+ .++|+.|||++|+|++. |....+.++..+.+.+|+..
T Consensus 251 ~~L~~L~Ls~N~l~-~lp~~~---~~~L~~L~Ls~N~l~~~-~~~~~l~~L~~L~L~~N~l~ 307 (310)
T 4glp_A 251 SALNSLNLSFAGLE-QVPKGL---PAKLRVLDLSSNRLNRA-PQPDELPEVDNLTLDGNPFL 307 (310)
T ss_dssp TTCCCEECCSSCCC-SCCSCC---CSCCSCEECCSCCCCSC-CCTTSCCCCSCEECSSTTTS
T ss_pred CcCCEEECCCCCCC-chhhhh---cCCCCEEECCCCcCCCC-chhhhCCCccEEECcCCCCC
Confidence 38999999999999 889877 37999999999999974 44455677788888888653
No 300
>4eco_A Uncharacterized protein; leucine-rich repeats, protein binding, structural genomics, center for structural genomics, JCSG; 2.70A {Bacteroides eggerthii dsm 20697}
Probab=99.86 E-value=1.9e-22 Score=236.47 Aligned_cols=203 Identities=23% Similarity=0.324 Sum_probs=179.4
Q ss_pred CCCCCCCCcEEEEEcCCCCCccC-----------------CCcCCC--CCCCCCEEeCcCCCCCCCCcccccCCCCccEE
Q 003847 74 PGEGNNDSRVIGLALPNSQLLGS-----------------IPADLG--MIEFLQYLDLSNNSLNGSLSFSLFNASQLRNL 134 (791)
Q Consensus 74 ~~~~~~~~~v~~L~L~~~~l~~~-----------------~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 134 (791)
|..+....+++.|+|++|+++|. +|..++ ++++|++|+|++|++.+.+|..|+++++|++|
T Consensus 199 p~~l~~l~~L~~L~Ls~n~l~~~~~~~~~~~~~~~~~~~~ip~~l~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 278 (636)
T 4eco_A 199 SKAVMRLTKLRQFYMGNSPFVAENICEAWENENSEYAQQYKTEDLKWDNLKDLTDVEVYNCPNLTKLPTFLKALPEMQLI 278 (636)
T ss_dssp CGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEECCTTCSSCCTTTTTCSSCCEE
T ss_pred CHHHhcccCCCEEECcCCccccccccccccccccchhcccCchhhhhcccCCCCEEEecCCcCCccChHHHhcCCCCCEE
Confidence 55677789999999999999996 999999 99999999999999999999999999999999
Q ss_pred EccCCc-CCC-CCccccCCC------CCCCEEeCcCCcCCCCCcc--ccCCCCCCCEEeCCCCcCCCCCCCCC---cccc
Q 003847 135 DLSNNL-ISG-HLPETMGSL------HNLQLLNLSDNALAGKLPV--SLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQ 201 (791)
Q Consensus 135 ~L~~N~-l~~-~~p~~~~~l------~~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~ 201 (791)
+|++|+ |+| .+|..++++ ++|++|+|++|+++ .+|. .|.++++|++|+|++|+++|.+| .| ++|+
T Consensus 279 ~Ls~n~~l~~~~lp~~~~~L~~~~~l~~L~~L~L~~n~l~-~ip~~~~l~~l~~L~~L~L~~N~l~g~ip-~~~~l~~L~ 356 (636)
T 4eco_A 279 NVACNRGISGEQLKDDWQALADAPVGEKIQIIYIGYNNLK-TFPVETSLQKMKKLGMLECLYNQLEGKLP-AFGSEIKLA 356 (636)
T ss_dssp ECTTCTTSCHHHHHHHHHHHHHSGGGGTCCEEECCSSCCS-SCCCHHHHTTCTTCCEEECCSCCCEEECC-CCEEEEEES
T ss_pred ECcCCCCCccccchHHHHhhhccccCCCCCEEECCCCcCC-ccCchhhhccCCCCCEEeCcCCcCccchh-hhCCCCCCC
Confidence 999998 998 899998887 99999999999999 8998 99999999999999999998888 66 7899
Q ss_pred eeccccccccccCCCCcCC-cc-ccEEEccCCcCcccCchhHhh-cCCCCcEEEcccCcCcccCCCCCc--------ccc
Q 003847 202 VLDLSSNLINGSLPPDIGG-YS-LRYLNLSYNRLSGEIPPQFGE-KIPVNATIDLSFNNLTGEIPESNV--------FMN 270 (791)
Q Consensus 202 ~L~ls~N~l~~~~p~~~~~-~~-L~~L~l~~N~l~g~ip~~~~~-~l~~l~~l~l~~N~l~~~~p~~~~--------~~~ 270 (791)
.|+|++|+|+ .+|..+.. .+ |++|+|++|+|+ .+|..+.. .+++|++|+|++|++++.+|.... ..+
T Consensus 357 ~L~L~~N~l~-~lp~~l~~l~~~L~~L~Ls~N~l~-~lp~~~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~~~~~~~~~~~ 434 (636)
T 4eco_A 357 SLNLAYNQIT-EIPANFCGFTEQVENLSFAHNKLK-YIPNIFDAKSVSVMSAIDFSYNEIGSVDGKNFDPLDPTPFKGIN 434 (636)
T ss_dssp EEECCSSEEE-ECCTTSEEECTTCCEEECCSSCCS-SCCSCCCTTCSSCEEEEECCSSCTTTTTTCSSCTTCSSCCCCCC
T ss_pred EEECCCCccc-cccHhhhhhcccCcEEEccCCcCc-ccchhhhhcccCccCEEECcCCcCCCcchhhhcccccccccCCC
Confidence 9999999999 88888876 46 999999999999 89987654 134899999999999998886533 335
Q ss_pred cccccccCCC
Q 003847 271 QESSSFSGNL 280 (791)
Q Consensus 271 ~~~~~~~~n~ 280 (791)
+..+.+.+|.
T Consensus 435 L~~L~Ls~N~ 444 (636)
T 4eco_A 435 VSSINLSNNQ 444 (636)
T ss_dssp EEEEECCSSC
T ss_pred CCEEECcCCc
Confidence 5556666654
No 301
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.86 E-value=6.6e-22 Score=226.04 Aligned_cols=198 Identities=26% Similarity=0.325 Sum_probs=152.7
Q ss_pred ccCCCCCCCCCCc-----eeeee-eeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccc
Q 003847 52 VLGSWNYNDENPC-----SWNGV-TCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSL 125 (791)
Q Consensus 52 ~l~sw~~~~~~~c-----~w~gv-~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~ 125 (791)
.+.+|.. +.+|| .|.|+ .|. ..+++.|+|++|+|++ +|..+. ++|++|+|++|+|+ .+|
T Consensus 32 ~l~~W~~-~~~~~~~~~~~~~~l~~C~-------~~~L~~L~Ls~n~L~~-lp~~l~--~~L~~L~Ls~N~l~-~ip--- 96 (571)
T 3cvr_A 32 AWDKWEK-QALPGENRNEAVSLLKECL-------INQFSELQLNRLNLSS-LPDNLP--PQITVLEITQNALI-SLP--- 96 (571)
T ss_dssp HHHHHHT-TCCTTCCHHHHHHHHHHHH-------HTTCSEEECCSSCCSC-CCSCCC--TTCSEEECCSSCCS-CCC---
T ss_pred HHHHHhc-cCCccccccchhhhccccc-------cCCccEEEeCCCCCCc-cCHhHc--CCCCEEECcCCCCc-ccc---
Confidence 3556754 45678 79999 786 3578999999999987 676663 78999999999998 566
Q ss_pred cCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceecc
Q 003847 126 FNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDL 205 (791)
Q Consensus 126 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~l 205 (791)
..+++|++|+|++|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|..+++|+.|+|
T Consensus 97 ~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-lp~~l~~L~~L~L 167 (571)
T 3cvr_A 97 ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINADNNQLTM-LPELPTSLEVLSV 167 (571)
T ss_dssp CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEEC
T ss_pred cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeCCCCccCc-CCCcCCCcCEEEC
Confidence 457899999999999986 777 665 89999999999986 665 67889999999999887 5666788899999
Q ss_pred ccccccccCCCCcCCccccEEEccCCcCcccCchhHhhcCCCC-------cEEEcccCcCcccCCC-CCccccccccccc
Q 003847 206 SSNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVN-------ATIDLSFNNLTGEIPE-SNVFMNQESSSFS 277 (791)
Q Consensus 206 s~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l-------~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~ 277 (791)
++|+|++ +|. +. .+|++|+|++|+|+ .+|. +.. +| +.|+|++|+|+. +|. ...+.++..+.+.
T Consensus 168 s~N~L~~-lp~-l~-~~L~~L~Ls~N~L~-~lp~-~~~---~L~~~~~~L~~L~Ls~N~l~~-lp~~l~~l~~L~~L~L~ 238 (571)
T 3cvr_A 168 RNNQLTF-LPE-LP-ESLEALDVSTNLLE-SLPA-VPV---RNHHSEETEIFFRCRENRITH-IPENILSLDPTCTIILE 238 (571)
T ss_dssp CSSCCSC-CCC-CC-TTCCEEECCSSCCS-SCCC-CC-----------CCEEEECCSSCCCC-CCGGGGGSCTTEEEECC
T ss_pred CCCCCCC-cch-hh-CCCCEEECcCCCCC-chhh-HHH---hhhcccccceEEecCCCccee-cCHHHhcCCCCCEEEee
Confidence 9998885 666 55 78888888888888 7777 432 55 888888888885 454 3445566667777
Q ss_pred CCCCC
Q 003847 278 GNLDL 282 (791)
Q Consensus 278 ~n~~l 282 (791)
+|+..
T Consensus 239 ~N~l~ 243 (571)
T 3cvr_A 239 DNPLS 243 (571)
T ss_dssp SSSCC
T ss_pred CCcCC
Confidence 77654
No 302
>1wwl_A Monocyte differentiation antigen CD14; LPS, immune system; HET: NAG; 2.50A {Mus musculus}
Probab=99.86 E-value=3.8e-22 Score=212.88 Aligned_cols=178 Identities=22% Similarity=0.219 Sum_probs=155.1
Q ss_pred CCCCcEEEEEcCCCCCccCCCcCCCCC-----CCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCC--Ccccc-
Q 003847 78 NNDSRVIGLALPNSQLLGSIPADLGMI-----EFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGH--LPETM- 149 (791)
Q Consensus 78 ~~~~~v~~L~L~~~~l~~~~~~~~~~l-----~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~- 149 (791)
....+++.|+|++|++++. |..++.+ ++|++|+|++|+|++..|..|.++++|++|+|++|++.+. +|..+
T Consensus 118 ~~l~~L~~L~Ls~N~l~~~-~~~~~~l~~~~~~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~ 196 (312)
T 1wwl_A 118 ATGPDLNILNLRNVSWATR-DAWLAELQQWLKPGLKVLSIAQAHSLNFSCEQVRVFPALSTLDLSDNPELGERGLISALC 196 (312)
T ss_dssp CCSCCCSEEEEESCBCSSS-SSHHHHHHTTCCTTCCEEEEESCSCCCCCTTTCCCCSSCCEEECCSCTTCHHHHHHHHSC
T ss_pred hcCCCccEEEccCCCCcch-hHHHHHHHHhhcCCCcEEEeeCCCCccchHHHhccCCCCCEEECCCCCcCcchHHHHHHH
Confidence 5678999999999999988 8888877 9999999999999998889999999999999999999875 34455
Q ss_pred -CCCCCCCEEeCcCCcCCCC--Cc-cccCCCCCCCEEeCCCCcCCCCCCC-C---CcccceeccccccccccCCCCcCCc
Q 003847 150 -GSLHNLQLLNLSDNALAGK--LP-VSLTTLQSLTIVSLKNNYFSDGLPS-K---FNSVQVLDLSSNLINGSLPPDIGGY 221 (791)
Q Consensus 150 -~~l~~L~~L~ls~N~l~~~--~p-~~~~~l~~L~~L~L~~N~l~~~~p~-~---l~~L~~L~ls~N~l~~~~p~~~~~~ 221 (791)
.++++|++|+|++|+|++. ++ ..+.++++|++|+|++|+|++.+|. . +++|++|+|++|+|+ .+|..+. .
T Consensus 197 ~~~l~~L~~L~L~~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~Ls~N~l~-~ip~~~~-~ 274 (312)
T 1wwl_A 197 PLKFPTLQVLALRNAGMETPSGVCSALAAARVQLQGLDLSHNSLRDAAGAPSCDWPSQLNSLNLSFTGLK-QVPKGLP-A 274 (312)
T ss_dssp TTSCTTCCEEECTTSCCCCHHHHHHHHHHTTCCCSEEECTTSCCCSSCCCSCCCCCTTCCEEECTTSCCS-SCCSSCC-S
T ss_pred hccCCCCCEEECCCCcCcchHHHHHHHHhcCCCCCEEECCCCcCCcccchhhhhhcCCCCEEECCCCccC-hhhhhcc-C
Confidence 8999999999999999832 22 4456889999999999999997752 2 379999999999999 7888777 8
Q ss_pred cccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCccc
Q 003847 222 SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGE 261 (791)
Q Consensus 222 ~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~ 261 (791)
+|++|+|++|+|++ +|. +.. +++|++|+|++|+|++.
T Consensus 275 ~L~~L~Ls~N~l~~-~p~-~~~-l~~L~~L~L~~N~l~~~ 311 (312)
T 1wwl_A 275 KLSVLDLSYNRLDR-NPS-PDE-LPQVGNLSLKGNPFLDS 311 (312)
T ss_dssp EEEEEECCSSCCCS-CCC-TTT-SCEEEEEECTTCTTTCC
T ss_pred CceEEECCCCCCCC-Chh-Hhh-CCCCCEEeccCCCCCCC
Confidence 99999999999995 476 554 99999999999999863
No 303
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.86 E-value=1.5e-21 Score=221.28 Aligned_cols=213 Identities=17% Similarity=0.123 Sum_probs=175.8
Q ss_pred eeeeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcC
Q 003847 66 WNGVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLI 141 (791)
Q Consensus 66 w~gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 141 (791)
|..|.|...+- ..-...++.|+|++|+|++..+..|.++++|++|+|++|.|++..|..|.++++|++|+|++|+|
T Consensus 13 ~~~v~c~~~~l~~ip~~~~~~l~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~i~~~~~~~~~~l~~L~~L~L~~n~l 92 (477)
T 2id5_A 13 DRAVLCHRKRFVAVPEGIPTETRLLDLGKNRIKTLNQDEFASFPHLEELELNENIVSAVEPGAFNNLFNLRTLGLRSNRL 92 (477)
T ss_dssp TTEEECCSCCCSSCCSCCCTTCSEEECCSSCCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCC
T ss_pred CCEEEeCCCCcCcCCCCCCCCCcEEECCCCccceECHhHccCCCCCCEEECCCCccCEeChhhhhCCccCCEEECCCCcC
Confidence 67888863221 11245789999999999999999999999999999999999988899999999999999999999
Q ss_pred CCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCc
Q 003847 142 SGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDI 218 (791)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~ 218 (791)
++..+..|.++++|++|+|++|++++..|..|.++++|++|+|++|++++..+..| ++|+.|+|++|+|++..+..+
T Consensus 93 ~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l 172 (477)
T 2id5_A 93 KLIPLGVFTGLSNLTKLDISENKIVILLDYMFQDLYNLKSLEVGDNDLVYISHRAFSGLNSLEQLTLEKCNLTSIPTEAL 172 (477)
T ss_dssp CSCCTTSSTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEEECCTTCCEECTTSSTTCTTCCEEEEESCCCSSCCHHHH
T ss_pred CccCcccccCCCCCCEEECCCCccccCChhHccccccCCEEECCCCccceeChhhccCCCCCCEEECCCCcCcccChhHh
Confidence 97667779999999999999999999999999999999999999999998777655 789999999999996655556
Q ss_pred CC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCC
Q 003847 219 GG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGN 279 (791)
Q Consensus 219 ~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n 279 (791)
.. .+|+.|+|++|.+++..+..+. .+++|+.|+|++|++.+.+|.. ....++..+.+.+|
T Consensus 173 ~~l~~L~~L~l~~n~i~~~~~~~~~-~l~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~n 234 (477)
T 2id5_A 173 SHLHGLIVLRLRHLNINAIRDYSFK-RLYRLKVLEISHWPYLDTMTPNCLYGLNLTSLSITHC 234 (477)
T ss_dssp TTCTTCCEEEEESCCCCEECTTCSC-SCTTCCEEEEECCTTCCEECTTTTTTCCCSEEEEESS
T ss_pred cccCCCcEEeCCCCcCcEeChhhcc-cCcccceeeCCCCccccccCcccccCccccEEECcCC
Confidence 55 5899999999999854444444 4888888888888877776654 22234555555555
No 304
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.86 E-value=2.5e-22 Score=214.79 Aligned_cols=192 Identities=22% Similarity=0.197 Sum_probs=140.6
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|+|++|++++..+ |..+++|++|+|++|+|++.. .+++|++|+|++|+|++..+. .+++|+.|+
T Consensus 57 l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l~-----~~~~L~~L~l~~n~l~~~~~~---~~~~L~~L~ 126 (317)
T 3o53_A 57 FTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELL-----VGPSIETLHAANNNISRVSCS---RGQGKKNIY 126 (317)
T ss_dssp CTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEEE-----ECTTCCEEECCSSCCSEEEEC---CCSSCEEEE
T ss_pred CCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCcccccc-----CCCCcCEEECCCCccCCcCcc---ccCCCCEEE
Confidence 4455555555555554433 555555555555555555221 225566666666666544333 367899999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC----cccceeccccccccccCCCCcCCccccEEEccCCcCcc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF----NSVQVLDLSSNLINGSLPPDIGGYSLRYLNLSYNRLSG 235 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l----~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g 235 (791)
|++|++++..+..+..+++|++|+|++|++++..+..+ ++|++|+|++|+|++. +......+|++|+|++|+|+
T Consensus 127 l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~-~~~~~l~~L~~L~Ls~N~l~- 204 (317)
T 3o53_A 127 LANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDV-KGQVVFAKLKTLDLSSNKLA- 204 (317)
T ss_dssp CCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEE-ECCCCCTTCCEEECCSSCCC-
T ss_pred CCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCccc-ccccccccCCEEECCCCcCC-
Confidence 99999998878889999999999999999998766543 7899999999999854 54444578999999999999
Q ss_pred cCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCCCC
Q 003847 236 EIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCG 284 (791)
Q Consensus 236 ~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~ 284 (791)
.+|..+.. +++|+.|+|++|++++..+....+.++..+.+.+|++.|+
T Consensus 205 ~l~~~~~~-l~~L~~L~L~~N~l~~l~~~~~~l~~L~~L~l~~N~~~~~ 252 (317)
T 3o53_A 205 FMGPEFQS-AAGVTWISLRNNKLVLIEKALRFSQNLEHFDLRGNGFHCG 252 (317)
T ss_dssp EECGGGGG-GTTCSEEECTTSCCCEECTTCCCCTTCCEEECTTCCCBHH
T ss_pred cchhhhcc-cCcccEEECcCCcccchhhHhhcCCCCCEEEccCCCccCc
Confidence 56767665 9999999999999996544445566788889999999875
No 305
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.86 E-value=1.2e-21 Score=226.59 Aligned_cols=159 Identities=21% Similarity=0.263 Sum_probs=135.6
Q ss_pred cCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCC--CccccCCCCCCCEEeCCCCcCCCCCCCC----Ccc
Q 003847 126 FNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGK--LPVSLTTLQSLTIVSLKNNYFSDGLPSK----FNS 199 (791)
Q Consensus 126 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~--~p~~~~~l~~L~~L~L~~N~l~~~~p~~----l~~ 199 (791)
..+++|++|+|++|++++.+|..++++++|+.|+|++|++++. +|..|.++++|++|+|++|++++.+|.. +++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 6778899999999999988899999999999999999999963 3567899999999999999999855543 378
Q ss_pred cceeccccccccccCCCCcCCccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCC-CCcccccccccccC
Q 003847 200 VQVLDLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPE-SNVFMNQESSSFSG 278 (791)
Q Consensus 200 L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~~ 278 (791)
|+.|+|++|+|++.+|..+. .+|++|+|++|+|+ .+|..++. +++|++|+|++|+|+...+. ...+..+..+.+.+
T Consensus 430 L~~L~l~~n~l~~~~~~~l~-~~L~~L~L~~N~l~-~ip~~~~~-l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 506 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLP-PKVKVLDLHNNRIM-SIPKDVTH-LQALQELNVASNQLKSVPDGVFDRLTSLQYIWLHD 506 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCC-TTCSEEECCSSCCC-CCCTTTTS-SCCCSEEECCSSCCCCCCTTSTTTCTTCCCEECCS
T ss_pred CCEEECCCCCCCcchhhhhc-CcCCEEECCCCcCc-ccChhhcC-CCCCCEEECCCCCCCCCCHHHHhcCCCCCEEEecC
Confidence 99999999999888877665 68999999999999 89999984 99999999999999954443 35566788899999
Q ss_pred CCCCCCCCC
Q 003847 279 NLDLCGQPT 287 (791)
Q Consensus 279 n~~lc~~~~ 287 (791)
|++.|+|++
T Consensus 507 N~~~c~c~~ 515 (562)
T 3a79_B 507 NPWDCTCPG 515 (562)
T ss_dssp CCBCCCHHH
T ss_pred CCcCCCcch
Confidence 999998753
No 306
>1xku_A Decorin; proteoglycan, leucine-rich repeat, structural protein; HET: NAG; 2.15A {Bos taurus} SCOP: c.10.2.7 PDB: 1xec_A* 1xcd_A*
Probab=99.85 E-value=8.2e-21 Score=204.22 Aligned_cols=208 Identities=20% Similarity=0.214 Sum_probs=171.6
Q ss_pred eeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccc
Q 003847 69 VTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPET 148 (791)
Q Consensus 69 v~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~ 148 (791)
++-..+..+....+++.|+|++|++++..|..|+.+++|++|+|++|+|+ .+|..+. ++|++|+|++|++++..+..
T Consensus 64 i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~--~~L~~L~l~~n~l~~~~~~~ 140 (330)
T 1xku_A 64 ITEIKDGDFKNLKNLHTLILINNKISKISPGAFAPLVKLERLYLSKNQLK-ELPEKMP--KTLQELRVHENEITKVRKSV 140 (330)
T ss_dssp CCCBCTTTTTTCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSSCCS-BCCSSCC--TTCCEEECCSSCCCBBCHHH
T ss_pred CCEeChhhhccCCCCCEEECCCCcCCeeCHHHhcCCCCCCEEECCCCcCC-ccChhhc--ccccEEECCCCcccccCHhH
Confidence 33333445677889999999999999999999999999999999999998 5666554 79999999999999888888
Q ss_pred cCCCCCCCEEeCcCCcCCC--CCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccccccCCCCcCC-ccccE
Q 003847 149 MGSLHNLQLLNLSDNALAG--KLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRY 225 (791)
Q Consensus 149 ~~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~ 225 (791)
|.++++|+.|+|++|.+.. ..+..|.++++|++|+|++|+++......+++|+.|+|++|++++..|..+.. .+|++
T Consensus 141 ~~~l~~L~~L~l~~n~l~~~~~~~~~~~~l~~L~~L~l~~n~l~~l~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~ 220 (330)
T 1xku_A 141 FNGLNQMIVVELGTNPLKSSGIENGAFQGMKKLSYIRIADTNITTIPQGLPPSLTELHLDGNKITKVDAASLKGLNNLAK 220 (330)
T ss_dssp HTTCTTCCEEECCSSCCCGGGBCTTGGGGCTTCCEEECCSSCCCSCCSSCCTTCSEEECTTSCCCEECTGGGTTCTTCCE
T ss_pred hcCCccccEEECCCCcCCccCcChhhccCCCCcCEEECCCCccccCCccccccCCEEECCCCcCCccCHHHhcCCCCCCE
Confidence 9999999999999999964 77888999999999999999998744444588999999999998877777776 58999
Q ss_pred EEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCC
Q 003847 226 LNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLD 281 (791)
Q Consensus 226 L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~ 281 (791)
|+|++|++++..+..+.. +++|+.|+|++|+++ .+|.. ..+.++..+.+.+|..
T Consensus 221 L~Ls~n~l~~~~~~~~~~-l~~L~~L~L~~N~l~-~lp~~l~~l~~L~~L~l~~N~i 275 (330)
T 1xku_A 221 LGLSFNSISAVDNGSLAN-TPHLRELHLNNNKLV-KVPGGLADHKYIQVVYLHNNNI 275 (330)
T ss_dssp EECCSSCCCEECTTTGGG-STTCCEEECCSSCCS-SCCTTTTTCSSCCEEECCSSCC
T ss_pred EECCCCcCceeChhhccC-CCCCCEEECCCCcCc-cCChhhccCCCcCEEECCCCcC
Confidence 999999998655555655 899999999999998 45543 4455666777777754
No 307
>2z66_A Variable lymphocyte receptor B, TOLL-like recepto; TLR4, TOLL-like receptor, MD-2, LPS, leucine-rich repeat, glycoprotein, immune response; HET: NAG BMA FUL; 1.90A {Eptatretus burgeri}
Probab=99.85 E-value=9.2e-22 Score=209.27 Aligned_cols=182 Identities=21% Similarity=0.257 Sum_probs=160.9
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCc-ccccCCCCccEEEccCCcCCCCCccccCCCCCCCEE
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLS-FSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLL 158 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 158 (791)
..+++.|+|++|++.+ +|..+..+++|++|+|++|++++..+ ..+.++++|++|+|++|.+++..+..|.++++|++|
T Consensus 77 ~~~L~~L~Ls~n~i~~-l~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L 155 (306)
T 2z66_A 77 TTSLKYLDLSFNGVIT-MSSNFLGLEQLEHLDFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVL 155 (306)
T ss_dssp CSCCCEEECCSCSEEE-EEEEEETCTTCCEEECTTSEEESSTTTTTTTTCTTCCEEECTTSCCEECSTTTTTTCTTCCEE
T ss_pred ccccCEEECCCCcccc-ChhhcCCCCCCCEEECCCCcccccccchhhhhccCCCEEECCCCcCCccchhhcccCcCCCEE
Confidence 4567778888887764 56678999999999999999997655 689999999999999999999899999999999999
Q ss_pred eCcCCcCCC-CCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcC
Q 003847 159 NLSDNALAG-KLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRL 233 (791)
Q Consensus 159 ~ls~N~l~~-~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l 233 (791)
+|++|.+++ .+|..+..+++|++|+|++|++++..|..| ++|+.|+|++|+|++..+..+.. .+|++|+|++|++
T Consensus 156 ~l~~n~l~~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 235 (306)
T 2z66_A 156 KMAGNSFQENFLPDIFTELRNLTFLDLSQCQLEQLSPTAFNSLSSLQVLNMSHNNFFSLDTFPYKCLNSLQVLDYSLNHI 235 (306)
T ss_dssp ECTTCEEGGGEECSCCTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTSCCSBCCSGGGTTCTTCCEEECTTSCC
T ss_pred ECCCCccccccchhHHhhCcCCCEEECCCCCcCCcCHHHhcCCCCCCEEECCCCccCccChhhccCcccCCEeECCCCCC
Confidence 999999987 688999999999999999999999877765 78999999999999776666665 5899999999999
Q ss_pred cccCchhHhhcC-CCCcEEEcccCcCcccCC
Q 003847 234 SGEIPPQFGEKI-PVNATIDLSFNNLTGEIP 263 (791)
Q Consensus 234 ~g~ip~~~~~~l-~~l~~l~l~~N~l~~~~p 263 (791)
++..|..+.. + ++|++|+|++|++++..+
T Consensus 236 ~~~~~~~~~~-~~~~L~~L~L~~N~~~~~c~ 265 (306)
T 2z66_A 236 MTSKKQELQH-FPSSLAFLNLTQNDFACTCE 265 (306)
T ss_dssp CBCSSSSCCC-CCTTCCEEECTTCCEECSGG
T ss_pred cccCHHHHHh-hhccCCEEEccCCCeecccC
Confidence 9888888776 6 599999999999998754
No 308
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.85 E-value=2.7e-21 Score=221.62 Aligned_cols=159 Identities=23% Similarity=0.281 Sum_probs=139.2
Q ss_pred cCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCC--CCccccCCCCCCCEEeCCCCcCCCCCCCC----Ccc
Q 003847 126 FNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAG--KLPVSLTTLQSLTIVSLKNNYFSDGLPSK----FNS 199 (791)
Q Consensus 126 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~----l~~ 199 (791)
..+++|++|+|++|++++.+|..++++++|++|+|++|++++ .+|..+..+++|++|+|++|++++.+|.. +++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 678899999999999999899999999999999999999997 56678999999999999999999866543 378
Q ss_pred cceeccccccccccCCCCcCCccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCC-CCcccccccccccC
Q 003847 200 VQVLDLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPE-SNVFMNQESSSFSG 278 (791)
Q Consensus 200 L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~-~~~~~~~~~~~~~~ 278 (791)
|+.|+|++|++++.+|..+. .+|++|+|++|+|+ .+|..++. +++|++|+|++|+|+...+. ...+.++..+.+.+
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~-~~L~~L~Ls~N~l~-~ip~~~~~-l~~L~~L~L~~N~l~~l~~~~~~~l~~L~~L~l~~ 477 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLP-PRIKVLDLHSNKIK-SIPKQVVK-LEALQELNVASNQLKSVPDGIFDRLTSLQKIWLHT 477 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCC-TTCCEEECCSSCCC-CCCGGGGG-CTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEECcCCCCCcchhhhhc-ccCCEEECCCCccc-ccchhhhc-CCCCCEEECCCCcCCccCHHHhccCCcccEEECcC
Confidence 99999999999988887765 68999999999999 99999985 99999999999999954333 34566788899999
Q ss_pred CCCCCCCCC
Q 003847 279 NLDLCGQPT 287 (791)
Q Consensus 279 n~~lc~~~~ 287 (791)
|++.|+|++
T Consensus 478 N~~~c~c~~ 486 (520)
T 2z7x_B 478 NPWDCSCPR 486 (520)
T ss_dssp SCBCCCHHH
T ss_pred CCCcccCCc
Confidence 999998753
No 309
>2z80_A TOLL-like receptor 2, variable lymphocyte recepto; TLR2, lipopeptide, innate immunity, glycoprotein, immune RES inflammatory response; HET: NAG; 1.80A {Homo sapiens}
Probab=99.85 E-value=2.6e-22 Score=218.18 Aligned_cols=196 Identities=19% Similarity=0.159 Sum_probs=155.0
Q ss_pred eeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCc-
Q 003847 68 GVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLP- 146 (791)
Q Consensus 68 gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p- 146 (791)
+++-..+..+....+++.|+|++|++++..+..|+++++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+
T Consensus 63 ~i~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~ 142 (353)
T 2z80_A 63 RITYISNSDLQRCVNLQALVLTSNGINTIEEDSFSSLGSLEHLDLSYNYLSNLSSSWFKPLSSLTFLNLLGNPYKTLGET 142 (353)
T ss_dssp CCCEECTTTTTTCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECCSSCCSSCCHHHHTTCTTCSEEECTTCCCSSSCSS
T ss_pred cCcccCHHHhccCCCCCEEECCCCccCccCHhhcCCCCCCCEEECCCCcCCcCCHhHhCCCccCCEEECCCCCCcccCch
Confidence 3333334456678889999999999998888889999999999999999997666668899999999999999984433
Q ss_pred cccCCCCCCCEEeCcCC-cCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---------------------------c
Q 003847 147 ETMGSLHNLQLLNLSDN-ALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---------------------------N 198 (791)
Q Consensus 147 ~~~~~l~~L~~L~ls~N-~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---------------------------~ 198 (791)
..|.++++|++|+|++| .+.+..+..|.++++|++|+|++|++++..|..+ +
T Consensus 143 ~~~~~l~~L~~L~l~~n~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~l~~n~l~~~~~~~~~~~~ 222 (353)
T 2z80_A 143 SLFSHLTKLQILRVGNMDTFTKIQRKDFAGLTFLEELEIDASDLQSYEPKSLKSIQNVSHLILHMKQHILLLEIFVDVTS 222 (353)
T ss_dssp CSCTTCTTCCEEEEEESSSCCEECTTTTTTCCEEEEEEEEETTCCEECTTTTTTCSEEEEEEEECSCSTTHHHHHHHHTT
T ss_pred hhhccCCCCcEEECCCCccccccCHHHccCCCCCCEEECCCCCcCccCHHHHhccccCCeecCCCCccccchhhhhhhcc
Confidence 47888999999999988 4776667788888888888888888887656433 4
Q ss_pred ccceeccccccccccCCC-------------------------------CcCC-ccccEEEccCCcCcccCchhHhhcCC
Q 003847 199 SVQVLDLSSNLINGSLPP-------------------------------DIGG-YSLRYLNLSYNRLSGEIPPQFGEKIP 246 (791)
Q Consensus 199 ~L~~L~ls~N~l~~~~p~-------------------------------~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~ 246 (791)
+|+.|+|++|++++..+. .+.. .+|++|+|++|+|+ .+|..++..++
T Consensus 223 ~L~~L~L~~n~l~~~~~~~l~~~~~~~~l~~l~L~~~~l~~~~l~~l~~~l~~l~~L~~L~Ls~N~l~-~i~~~~~~~l~ 301 (353)
T 2z80_A 223 SVECLELRDTDLDTFHFSELSTGETNSLIKKFTFRNVKITDESLFQVMKLLNQISGLLELEFSRNQLK-SVPDGIFDRLT 301 (353)
T ss_dssp TEEEEEEESCBCTTCCCC------CCCCCCEEEEESCBCCHHHHHHHHHHHHTCTTCCEEECCSSCCC-CCCTTTTTTCT
T ss_pred cccEEECCCCccccccccccccccccchhhccccccccccCcchhhhHHHHhcccCCCEEECCCCCCC-ccCHHHHhcCC
Confidence 566666777776653322 1222 47999999999999 89998766699
Q ss_pred CCcEEEcccCcCcccCCC
Q 003847 247 VNATIDLSFNNLTGEIPE 264 (791)
Q Consensus 247 ~l~~l~l~~N~l~~~~p~ 264 (791)
+|++|+|++|++++.+|.
T Consensus 302 ~L~~L~L~~N~~~~~~~~ 319 (353)
T 2z80_A 302 SLQKIWLHTNPWDCSCPR 319 (353)
T ss_dssp TCCEEECCSSCBCCCHHH
T ss_pred CCCEEEeeCCCccCcCCC
Confidence 999999999999998774
No 310
>4ecn_A Leucine-rich repeat protein; leucine-rich repeats, DUF4458 domain, protein binding, extra protein, structural genomics; 2.80A {Bacteroides thetaiotaomicron}
Probab=99.85 E-value=8.1e-22 Score=235.57 Aligned_cols=201 Identities=23% Similarity=0.281 Sum_probs=173.3
Q ss_pred CCCCCCCCcEEEEEcCCCCCcc-----------------CCCcCCC--CCCCCCEEeCcCCCCCCCCcccccCCCCccEE
Q 003847 74 PGEGNNDSRVIGLALPNSQLLG-----------------SIPADLG--MIEFLQYLDLSNNSLNGSLSFSLFNASQLRNL 134 (791)
Q Consensus 74 ~~~~~~~~~v~~L~L~~~~l~~-----------------~~~~~~~--~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 134 (791)
|..+..+.+++.|+|++|+|+| .+|..++ +|++|++|+|++|++.+.+|..|.++++|++|
T Consensus 441 P~~l~~L~~L~~L~Ls~N~Lsg~~i~~~~~~~s~n~~~g~iP~~l~f~~L~~L~~L~Ls~N~l~~~iP~~l~~L~~L~~L 520 (876)
T 4ecn_A 441 SKAIQRLTKLQIIYFANSPFTYDNIAVDWEDANSDYAKQYENEELSWSNLKDLTDVELYNCPNMTQLPDFLYDLPELQSL 520 (876)
T ss_dssp CGGGGGCTTCCEEEEESCCCCGGGBSSSCSCTTSHHHHHHTTSCCCGGGCTTCCEEEEESCTTCCSCCGGGGGCSSCCEE
T ss_pred hHHHhcCCCCCEEECcCCcCCCCcccccccccccccccccCChhhhhccCCCCCEEECcCCCCCccChHHHhCCCCCCEE
Confidence 5557778999999999999999 4899988 99999999999999999999999999999999
Q ss_pred EccCCc-CCC-CCccccCCCC-------CCCEEeCcCCcCCCCCcc--ccCCCCCCCEEeCCCCcCCCCCCCCC---ccc
Q 003847 135 DLSNNL-ISG-HLPETMGSLH-------NLQLLNLSDNALAGKLPV--SLTTLQSLTIVSLKNNYFSDGLPSKF---NSV 200 (791)
Q Consensus 135 ~L~~N~-l~~-~~p~~~~~l~-------~L~~L~ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L 200 (791)
+|++|+ |+| .+|..+++++ +|+.|+|++|+|+ .+|. .|.++++|+.|+|++|+|+ .+| .| ++|
T Consensus 521 ~Ls~N~~lsg~~iP~~i~~L~~~~~~l~~L~~L~Ls~N~L~-~ip~~~~l~~L~~L~~L~Ls~N~l~-~lp-~~~~L~~L 597 (876)
T 4ecn_A 521 NIACNRGISAAQLKADWTRLADDEDTGPKIQIFYMGYNNLE-EFPASASLQKMVKLGLLDCVHNKVR-HLE-AFGTNVKL 597 (876)
T ss_dssp ECTTCTTSCHHHHHHHHHHHHHCTTTTTTCCEEECCSSCCC-BCCCHHHHTTCTTCCEEECTTSCCC-BCC-CCCTTSEE
T ss_pred ECcCCCCcccccchHHHHhhhhcccccCCccEEEeeCCcCC-ccCChhhhhcCCCCCEEECCCCCcc-cch-hhcCCCcc
Confidence 999998 998 8888766655 9999999999999 8898 9999999999999999999 677 44 789
Q ss_pred ceeccccccccccCCCCcCC-cc-ccEEEccCCcCcccCchhHhhcCC--CCcEEEcccCcCcccCCCCC------cccc
Q 003847 201 QVLDLSSNLINGSLPPDIGG-YS-LRYLNLSYNRLSGEIPPQFGEKIP--VNATIDLSFNNLTGEIPESN------VFMN 270 (791)
Q Consensus 201 ~~L~ls~N~l~~~~p~~~~~-~~-L~~L~l~~N~l~g~ip~~~~~~l~--~l~~l~l~~N~l~~~~p~~~------~~~~ 270 (791)
+.|+|++|+|+ .+|..+.. .+ |++|+|++|+|+ .+|..+.. +. +|+.|+|++|+++|.+|... ...+
T Consensus 598 ~~L~Ls~N~l~-~lp~~l~~l~~~L~~L~Ls~N~L~-~lp~~~~~-~~~~~L~~L~Ls~N~l~g~ip~l~~~l~~~~~~~ 674 (876)
T 4ecn_A 598 TDLKLDYNQIE-EIPEDFCAFTDQVEGLGFSHNKLK-YIPNIFNA-KSVYVMGSVDFSYNKIGSEGRNISCSMDDYKGIN 674 (876)
T ss_dssp SEEECCSSCCS-CCCTTSCEECTTCCEEECCSSCCC-SCCSCCCT-TCSSCEEEEECCSSCTTTTSSSCSSCTTTCCCCC
T ss_pred eEEECcCCccc-cchHHHhhccccCCEEECcCCCCC-cCchhhhc-cccCCCCEEECcCCcCCCccccchhhhccccCCC
Confidence 99999999999 88888877 46 999999999999 89977654 54 49999999999999877542 2224
Q ss_pred cccccccCCC
Q 003847 271 QESSSFSGNL 280 (791)
Q Consensus 271 ~~~~~~~~n~ 280 (791)
+..+.+.+|.
T Consensus 675 L~~L~Ls~N~ 684 (876)
T 4ecn_A 675 ASTVTLSYNE 684 (876)
T ss_dssp EEEEECCSSC
T ss_pred cCEEEccCCc
Confidence 5556666654
No 311
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.84 E-value=4.1e-20 Score=187.65 Aligned_cols=161 Identities=23% Similarity=0.232 Sum_probs=117.5
Q ss_pred CCCCceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCC
Q 003847 60 DENPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNN 139 (791)
Q Consensus 60 ~~~~c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 139 (791)
+.+.|+|.+|.|. ++++. .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 15 ~~~~Cs~~~v~c~-----------------~~~l~-~ip~~~~--~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N 74 (229)
T 3e6j_A 15 SQCSCSGTTVDCR-----------------SKRHA-SVPAGIP--TNAQILYLHDNQITKLEPGVFDSLINLKELYLGSN 74 (229)
T ss_dssp TTCEEETTEEECT-----------------TSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred CCCEEeCCEeEcc-----------------CCCcC-ccCCCCC--CCCCEEEcCCCccCccCHHHhhCccCCcEEECCCC
Confidence 4577999999997 23343 4555443 88999999999999888888999999999999999
Q ss_pred cCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccccccCCCCcC
Q 003847 140 LISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIG 219 (791)
Q Consensus 140 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~ 219 (791)
+|++..+..|.++++|+.|+|++|+|++..+..|..+++|++|+|++|+|+. +|..+ .
T Consensus 75 ~l~~i~~~~~~~l~~L~~L~Ls~N~l~~l~~~~~~~l~~L~~L~Ls~N~l~~-lp~~~---------------------~ 132 (229)
T 3e6j_A 75 QLGALPVGVFDSLTQLTVLDLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTE-LPRGI---------------------E 132 (229)
T ss_dssp CCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCS-CCTTG---------------------G
T ss_pred CCCCcChhhcccCCCcCEEECCCCcCCccChhHhCcchhhCeEeccCCcccc-cCccc---------------------c
Confidence 9986666778899999999999999997777778888888888888888873 34332 2
Q ss_pred C-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCC
Q 003847 220 G-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIP 263 (791)
Q Consensus 220 ~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p 263 (791)
. .+|++|+|++|+|+ .+|...+..+++|+.|+|++|++++..+
T Consensus 133 ~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~l~~N~~~c~c~ 176 (229)
T 3e6j_A 133 RLTHLTHLALDQNQLK-SIPHGAFDRLSSLTHAYLFGNPWDCECR 176 (229)
T ss_dssp GCTTCSEEECCSSCCC-CCCTTTTTTCTTCCEEECTTSCBCTTBG
T ss_pred cCCCCCEEECCCCcCC-ccCHHHHhCCCCCCEEEeeCCCccCCcc
Confidence 2 24555555566555 3443333346666666666666665554
No 312
>2z81_A CD282 antigen, TOLL-like receptor 2, variable lymphocyte recepto; TLR2, PAM3CSK4, lipopeptide, innate immunity, cytoplasmic VE glycoprotein; HET: NAG BMA MAN PCJ; 1.80A {Mus musculus} PDB: 2z82_A* 3a7c_A* 3a79_A* 3a7b_A* 2z7x_A*
Probab=99.83 E-value=4.7e-21 Score=221.09 Aligned_cols=198 Identities=22% Similarity=0.241 Sum_probs=169.0
Q ss_pred CcEEEEEcCCCCCccCCCcCC-CCCCCCCEEeCcCCCCCCCCcc---cccCCCCccEEEccCCcCCCCCc--cccCCCCC
Q 003847 81 SRVIGLALPNSQLLGSIPADL-GMIEFLQYLDLSNNSLNGSLSF---SLFNASQLRNLDLSNNLISGHLP--ETMGSLHN 154 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~-~~l~~L~~L~L~~N~l~~~~p~---~~~~l~~L~~L~L~~N~l~~~~p--~~~~~l~~ 154 (791)
++++.|+|++|++. .+|..+ ..+++|++|+|++|++++.+|. .+..+++|++|+|++|+|++..+ ..+..+++
T Consensus 310 ~~L~~L~l~~n~l~-~ip~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~l~~ 388 (549)
T 2z81_A 310 EKVKRITVENSKVF-LVPCSFSQHLKSLEFLDLSENLMVEEYLKNSACKGAWPSLQTLVLSQNHLRSMQKTGEILLTLKN 388 (549)
T ss_dssp TTCCEEEEESSCCC-CCCHHHHHHCTTCCEEECCSSCCCHHHHHHHTCTTSSTTCCEEECTTSCCCCHHHHHHHGGGCTT
T ss_pred ccceEEEeccCccc-cCCHHHHhcCccccEEEccCCccccccccchhhhhccccCcEEEccCCcccccccchhhhhcCCC
Confidence 57889999999986 567665 5799999999999999987643 47889999999999999986533 56899999
Q ss_pred CCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccccccCCCCcCCccccEEEccCCcCc
Q 003847 155 LQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGGYSLRYLNLSYNRLS 234 (791)
Q Consensus 155 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~ 234 (791)
|++|+|++|+|+ .+|..+..+++|++|+|++|+|++......++|++|+|++|+|++.+. ...+|++|+|++|+|+
T Consensus 389 L~~L~Ls~N~l~-~lp~~~~~~~~L~~L~Ls~N~l~~l~~~~~~~L~~L~Ls~N~l~~~~~---~l~~L~~L~Ls~N~l~ 464 (549)
T 2z81_A 389 LTSLDISRNTFH-PMPDSCQWPEKMRFLNLSSTGIRVVKTCIPQTLEVLDVSNNNLDSFSL---FLPRLQELYISRNKLK 464 (549)
T ss_dssp CCEEECTTCCCC-CCCSCCCCCTTCCEEECTTSCCSCCCTTSCTTCSEEECCSSCCSCCCC---CCTTCCEEECCSSCCS
T ss_pred CCEEECCCCCCc-cCChhhcccccccEEECCCCCcccccchhcCCceEEECCCCChhhhcc---cCChhcEEECCCCccC
Confidence 999999999999 789999999999999999999987443444789999999999996531 2358999999999999
Q ss_pred ccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCCCCCCC
Q 003847 235 GEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLDLCGQP 286 (791)
Q Consensus 235 g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~ 286 (791)
.+|.. .. +++|++|+|++|+|++.+|.. ..+..+..+.+.+|++.|+++
T Consensus 465 -~ip~~-~~-l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 514 (549)
T 2z81_A 465 -TLPDA-SL-FPVLLVMKISRNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 514 (549)
T ss_dssp -SCCCG-GG-CTTCCEEECCSSCCCCCCTTGGGGCTTCCEEECCSSCBCCCHH
T ss_pred -cCCCc-cc-CccCCEEecCCCccCCcCHHHHhcCcccCEEEecCCCccCCCc
Confidence 89974 33 999999999999999988874 456678889999999999875
No 313
>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}
Probab=99.83 E-value=6.9e-22 Score=223.84 Aligned_cols=183 Identities=23% Similarity=0.224 Sum_probs=146.8
Q ss_pred CCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcc----------------cccCCCCccEEEccCC
Q 003847 76 EGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSF----------------SLFNASQLRNLDLSNN 139 (791)
Q Consensus 76 ~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~----------------~~~~l~~L~~L~L~~N 139 (791)
.+....+++.|+|++|.+++..| |+.+++|++|+|++|.|++..+. ....+++|+.|+|++|
T Consensus 53 ~~~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~l~~~~~L~~L~L~~N~l~~~~~~~l~~L~~L~L~~N 130 (487)
T 3oja_A 53 DLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQELLVGPSIETLHAANNNISRVSCSRGQGKKNIYLANN 130 (487)
T ss_dssp GGTTCTTCCEEECTTSCCEEEEE--CTTCTTCCEEECCSSEEEEEEECTTCCEEECCSSCCCCEEECCCSSCEEEECCSS
T ss_pred HHhCCCCCCEEEeeCCCCCCCcc--cccCCCCCEEEecCCcCCCCCCCCCcCEEECcCCcCCCCCccccCCCCEEECCCC
Confidence 34456677777777777776554 67777777776666665532111 1124678999999999
Q ss_pred cCCCCCccccCCCCCCCEEeCcCCcCCCCCccccC-CCCCCCEEeCCCCcCCCCCCCC-CcccceeccccccccccCCCC
Q 003847 140 LISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLT-TLQSLTIVSLKNNYFSDGLPSK-FNSVQVLDLSSNLINGSLPPD 217 (791)
Q Consensus 140 ~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~-l~~L~~L~ls~N~l~~~~p~~ 217 (791)
.|++..|..|+++++|+.|+|++|.|++..|..+. .+++|+.|+|++|.|++..+.. +++|+.|+|++|.|++..|.
T Consensus 131 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~l~~~l~~L~~L~Ls~N~l~~~~~~~~l~~L~~L~Ls~N~l~~~~~~- 209 (487)
T 3oja_A 131 KITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIYDVKGQVVFAKLKTLDLSSNKLAFMGPE- 209 (487)
T ss_dssp CCCSGGGBCGGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCCEEECCCCCTTCCEEECCSSCCCEECGG-
T ss_pred CCCCCCchhhcCCCCCCEEECCCCCCCCcChHHHhhhCCcccEEecCCCccccccccccCCCCCEEECCCCCCCCCCHh-
Confidence 99998899999999999999999999998888886 7999999999999999864433 58999999999999975554
Q ss_pred cCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCc-ccCC
Q 003847 218 IGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLT-GEIP 263 (791)
Q Consensus 218 ~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~-~~~p 263 (791)
+.. .+|+.|+|++|.|+ .+|..+.. +++|+.|+|++|+++ +.+|
T Consensus 210 ~~~l~~L~~L~Ls~N~l~-~lp~~l~~-l~~L~~L~l~~N~l~c~~~~ 255 (487)
T 3oja_A 210 FQSAAGVTWISLRNNKLV-LIEKALRF-SQNLEHFDLRGNGFHCGTLR 255 (487)
T ss_dssp GGGGTTCSEEECTTSCCC-EECTTCCC-CTTCCEEECTTCCBCHHHHH
T ss_pred HcCCCCccEEEecCCcCc-ccchhhcc-CCCCCEEEcCCCCCcCcchH
Confidence 554 68999999999999 58888765 999999999999998 4444
No 314
>1ziw_A TOLL-like receptor 3; innate immunity, immune system; HET: NDG NAG; 2.10A {Homo sapiens} PDB: 2a0z_A* 3cig_A* 3ciy_A*
Probab=99.83 E-value=3.5e-20 Score=219.55 Aligned_cols=201 Identities=22% Similarity=0.157 Sum_probs=163.2
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|+|++|++++..+..|+++++|++|+|++|.+++..|..|.++++|++|+|++|+|++..+..|+++++|++|+
T Consensus 24 ~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~l~~~~~~~l~~L~~L~ 103 (680)
T 1ziw_A 24 PTNITVLNLTHNQLRRLPAANFTRYSQLTSLDVGFNTISKLEPELCQKLPMLKVLNLQHNELSQLSDKTFAFCTNLTELH 103 (680)
T ss_dssp CTTCSEEECCSSCCCCCCGGGGGGGTTCSEEECCSSCCCCCCTTHHHHCTTCCEEECCSSCCCCCCTTTTTTCTTCSEEE
T ss_pred CCCCcEEECCCCCCCCcCHHHHhCCCcCcEEECCCCccCccCHHHHhcccCcCEEECCCCccCccChhhhccCCCCCEEE
Confidence 36899999999999988888899999999999999999998899999999999999999999966666799999999999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC---ccccEEEccCCcC
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG---YSLRYLNLSYNRL 233 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~---~~L~~L~l~~N~l 233 (791)
|++|++++..|..|.++++|++|+|++|.+++..|..+ ++|++|+|++|++++..+..+.. .+|++|+|++|++
T Consensus 104 L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~~~~~~L~~L~L~~n~l 183 (680)
T 1ziw_A 104 LMSNSIQKIKNNPFVKQKNLITLDLSHNGLSSTKLGTQVQLENLQELLLSNNKIQALKSEELDIFANSSLKKLELSSNQI 183 (680)
T ss_dssp CCSSCCCCCCSCTTTTCTTCCEEECCSSCCSCCCCCSSSCCTTCCEEECCSSCCCCBCHHHHGGGTTCEESEEECTTCCC
T ss_pred CCCCccCccChhHccccCCCCEEECCCCcccccCchhhcccccCCEEEccCCcccccCHHHhhccccccccEEECCCCcc
Confidence 99999998777889999999999999999998877654 78999999999998776665432 5899999999999
Q ss_pred cccCchhHhh--------------------------cCCCCcEEEcccCcCcccCCCCCccc---ccccccccCCC
Q 003847 234 SGEIPPQFGE--------------------------KIPVNATIDLSFNNLTGEIPESNVFM---NQESSSFSGNL 280 (791)
Q Consensus 234 ~g~ip~~~~~--------------------------~l~~l~~l~l~~N~l~~~~p~~~~~~---~~~~~~~~~n~ 280 (791)
++..|..+.. ..++|+.|+|++|.+++..|...... ++..+.+.+|.
T Consensus 184 ~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~~~~~l~~~~L~~L~L~~n~l~~~~~~~~~~l~~~~L~~L~Ls~n~ 259 (680)
T 1ziw_A 184 KEFSPGCFHAIGRLFGLFLNNVQLGPSLTEKLCLELANTSIRNLSLSNSQLSTTSNTTFLGLKWTNLTMLDLSYNN 259 (680)
T ss_dssp CCBCTTGGGGSSEECEEECTTCCCHHHHHHHHHHHHTTSCCCEEECTTSCCCEECTTTTGGGGGSCCCEEECTTSC
T ss_pred cccChhhhhhhhhhhhhhccccccChhhHHHHHHHhhhccccEEEccCCcccccChhHhhccCcCCCCEEECCCCC
Confidence 8766655432 12566777777777777776653321 25555555553
No 315
>2o6s_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 1.50A {Eptatretus burgeri}
Probab=99.83 E-value=3.8e-20 Score=184.97 Aligned_cols=171 Identities=23% Similarity=0.222 Sum_probs=150.2
Q ss_pred ceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCC
Q 003847 64 CSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISG 143 (791)
Q Consensus 64 c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 143 (791)
|+..|++-... ....+++.|+|++|++++..+..|+.+++|++|+|++|+|++..+..|.++++|++|+|++|+|++
T Consensus 14 c~~~~l~~~p~---~~~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~ 90 (208)
T 2o6s_A 14 CYSQGRTSVPT---GIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQS 90 (208)
T ss_dssp CCSSCCSSCCS---CCCTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred ecCCCccCCCC---CCCCCCcEEEcCCCccCcCChhhhcccccCcEEECCCCccCccChhhcCCCCCcCEEECCCCcCCc
Confidence 77777766532 224689999999999998888889999999999999999997777778999999999999999997
Q ss_pred CCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC
Q 003847 144 HLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG 220 (791)
Q Consensus 144 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~ 220 (791)
..+..|.++++|++|+|++|+|++..+..|..+++|+.|+|++|+|++..+..| ++|+.|+|++|.+.+..|
T Consensus 91 ~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~----- 165 (208)
T 2o6s_A 91 LPNGVFDKLTQLKELALNTNQLQSLPDGVFDKLTQLKDLRLYQNQLKSVPDGVFDRLTSLQYIWLHDNPWDCTCP----- 165 (208)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSCCBCCCTT-----
T ss_pred cCHhHhcCccCCCEEEcCCCcCcccCHhHhccCCcCCEEECCCCccceeCHHHhccCCCccEEEecCCCeecCCC-----
Confidence 777778999999999999999998777789999999999999999998766544 789999999999886543
Q ss_pred ccccEEEccCCcCcccCchhHhh
Q 003847 221 YSLRYLNLSYNRLSGEIPPQFGE 243 (791)
Q Consensus 221 ~~L~~L~l~~N~l~g~ip~~~~~ 243 (791)
+|++|+++.|+++|.+|..+..
T Consensus 166 -~l~~L~~~~n~~~g~ip~~~~~ 187 (208)
T 2o6s_A 166 -GIRYLSEWINKHSGVVRNSAGS 187 (208)
T ss_dssp -TTHHHHHHHHHCTTTBBCTTSS
T ss_pred -CHHHHHHHHHhCCceeeccCcc
Confidence 7899999999999999988765
No 316
>3t6q_A CD180 antigen; protein-protein complex, leucine rich repeat, MD-2 related L recognition, receptor, innate immunity, glycosylation, IMMU; HET: NAG BMA MAN; 1.90A {Mus musculus} PDB: 3b2d_A* 3rg1_A*
Probab=99.83 E-value=2.8e-20 Score=217.28 Aligned_cols=156 Identities=19% Similarity=0.165 Sum_probs=124.6
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
...++.|+|++|++++..|..|+++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|+++++|++|+
T Consensus 32 ~~~l~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~ 111 (606)
T 3t6q_A 32 PNSTECLEFSFNVLPTIQNTTFSRLINLTFLDLTRCQIYWIHEDTFQSQHRLDTLVLTANPLIFMAETALSGPKALKHLF 111 (606)
T ss_dssp CTTCCEEECTTCCCSEECTTTSTTCTTCSEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCSEECTTTTSSCTTCCEEE
T ss_pred CCcCcEEEccCCccCcCChhHhccCccceEEECCCCccceeChhhccCccccCeeeCCCCcccccChhhhcccccccEee
Confidence 35788999999999988888999999999999999999988888899999999999999999988888899999999999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCC-CCC--CcccceeccccccccccCCCCcCC-cccc--EEEccCCcC
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGL-PSK--FNSVQVLDLSSNLINGSLPPDIGG-YSLR--YLNLSYNRL 233 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~--l~~L~~L~ls~N~l~~~~p~~~~~-~~L~--~L~l~~N~l 233 (791)
|++|++++..|..|.++++|++|+|++|++++.. |.. +++|++|+|++|++++..|..+.. .+|+ .|++++|++
T Consensus 112 L~~n~i~~l~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~l~L~l~~n~l 191 (606)
T 3t6q_A 112 FIQTGISSIDFIPLHNQKTLESLYLGSNHISSIKLPKGFPTEKLKVLDFQNNAIHYLSKEDMSSLQQATNLSLNLNGNDI 191 (606)
T ss_dssp CTTSCCSCGGGSCCTTCTTCCEEECCSSCCCCCCCCTTCCCTTCCEEECCSSCCCEECHHHHHTTTTCCSEEEECTTCCC
T ss_pred ccccCcccCCcchhccCCcccEEECCCCcccccCcccccCCcccCEEEcccCcccccChhhhhhhcccceeEEecCCCcc
Confidence 9999998776788888999999999999888743 332 367777777777777555544443 2444 555555555
Q ss_pred cc
Q 003847 234 SG 235 (791)
Q Consensus 234 ~g 235 (791)
++
T Consensus 192 ~~ 193 (606)
T 3t6q_A 192 AG 193 (606)
T ss_dssp CE
T ss_pred Cc
Confidence 53
No 317
>3a79_B TLR6, VLRB.59, TOLL-like receptor 6, variable lymphocyte recepto; diacyl lipopeptide, innate immunity, Leu repeat, cell membrane, cytoplasmic vesicle; HET: PXS NAG BMA NDG; 2.90A {Mus musculus}
Probab=99.83 E-value=2.3e-20 Score=215.97 Aligned_cols=161 Identities=22% Similarity=0.264 Sum_probs=145.3
Q ss_pred CCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCC--CccccCCCCCCCEEeCcCCcCCCCCcc-ccCCCCC
Q 003847 102 GMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGH--LPETMGSLHNLQLLNLSDNALAGKLPV-SLTTLQS 178 (791)
Q Consensus 102 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~ 178 (791)
..+++|++|+|++|++++.+|..+.++++|++|+|++|+|++. +|..|.++++|++|+|++|++++.+|. .+..+++
T Consensus 350 ~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~l~~ 429 (562)
T 3a79_B 350 PSPSSFTFLNFTQNVFTDSVFQGCSTLKRLQTLILQRNGLKNFFKVALMTKNMSSLETLDVSLNSLNSHAYDRTCAWAES 429 (562)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCSCSSCCEEECCSSCCCBTTHHHHTTTTCTTCCEEECTTSCCBSCCSSCCCCCCTT
T ss_pred cCCCCceEEECCCCccccchhhhhcccCCCCEEECCCCCcCCcccchhhhcCCCCCCEEECCCCcCCCccChhhhcCccc
Confidence 7889999999999999999999999999999999999999963 457799999999999999999985655 5889999
Q ss_pred CCEEeCCCCcCCCCCCCCC-cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccC
Q 003847 179 LTIVSLKNNYFSDGLPSKF-NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFN 256 (791)
Q Consensus 179 L~~L~L~~N~l~~~~p~~l-~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N 256 (791)
|++|+|++|+|++.+|..+ ++|+.|+|++|+|+ .+|..+.. .+|++|+|++|+|+ .+|...+..+++|+.|+|++|
T Consensus 430 L~~L~l~~n~l~~~~~~~l~~~L~~L~L~~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N 507 (562)
T 3a79_B 430 ILVLNLSSNMLTGSVFRCLPPKVKVLDLHNNRIM-SIPKDVTHLQALQELNVASNQLK-SVPDGVFDRLTSLQYIWLHDN 507 (562)
T ss_dssp CCEEECCSSCCCGGGGSSCCTTCSEEECCSSCCC-CCCTTTTSSCCCSEEECCSSCCC-CCCTTSTTTCTTCCCEECCSC
T ss_pred CCEEECCCCCCCcchhhhhcCcCCEEECCCCcCc-ccChhhcCCCCCCEEECCCCCCC-CCCHHHHhcCCCCCEEEecCC
Confidence 9999999999999999888 69999999999999 67776655 58999999999999 899884445999999999999
Q ss_pred cCcccCCC
Q 003847 257 NLTGEIPE 264 (791)
Q Consensus 257 ~l~~~~p~ 264 (791)
+++|.+|.
T Consensus 508 ~~~c~c~~ 515 (562)
T 3a79_B 508 PWDCTCPG 515 (562)
T ss_dssp CBCCCHHH
T ss_pred CcCCCcch
Confidence 99988774
No 318
>2z7x_B TOLL-like receptor 1, variable lymphocyte recepto; TLR2, TLR1, lipopeptide, innate immunity, glycoPro immune response, inflammatory response, leucine-rich repeat membrane, receptor; HET: NAG NDG MAN BMA PCJ; 2.10A {Homo sapiens}
Probab=99.82 E-value=1.4e-20 Score=215.67 Aligned_cols=161 Identities=25% Similarity=0.297 Sum_probs=146.1
Q ss_pred CCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCC--CCccccCCCCCCCEEeCcCCcCCCCCcc-ccCCCCC
Q 003847 102 GMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISG--HLPETMGSLHNLQLLNLSDNALAGKLPV-SLTTLQS 178 (791)
Q Consensus 102 ~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~-~~~~l~~ 178 (791)
..+++|++|+|++|++++.+|..+.++++|++|+|++|+|++ .+|..+.++++|++|+|++|++++.+|. .+..+++
T Consensus 321 ~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~l~~L~~L~Ls~N~l~~~l~~~~~~~l~~ 400 (520)
T 2z7x_B 321 SKISPFLHLDFSNNLLTDTVFENCGHLTELETLILQMNQLKELSKIAEMTTQMKSLQQLDISQNSVSYDEKKGDCSWTKS 400 (520)
T ss_dssp SSCCCCCEEECCSSCCCTTTTTTCCCCSSCCEEECCSSCCCBHHHHHHHHTTCTTCCEEECCSSCCBCCGGGCSCCCCTT
T ss_pred hhCCcccEEEeECCccChhhhhhhccCCCCCEEEccCCccCccccchHHHhhCCCCCEEECCCCcCCcccccchhccCcc
Confidence 788999999999999999999999999999999999999996 5678899999999999999999985665 4889999
Q ss_pred CCEEeCCCCcCCCCCCCCC-cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccC
Q 003847 179 LTIVSLKNNYFSDGLPSKF-NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFN 256 (791)
Q Consensus 179 L~~L~L~~N~l~~~~p~~l-~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N 256 (791)
|++|+|++|++++.+|..+ ++|+.|+|++|+|+ .+|..+.. .+|++|+|++|+|+ .+|...+..+++|++|+|++|
T Consensus 401 L~~L~Ls~N~l~~~~~~~l~~~L~~L~Ls~N~l~-~ip~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~l~~L~~L~l~~N 478 (520)
T 2z7x_B 401 LLSLNMSSNILTDTIFRCLPPRIKVLDLHSNKIK-SIPKQVVKLEALQELNVASNQLK-SVPDGIFDRLTSLQKIWLHTN 478 (520)
T ss_dssp CCEEECCSSCCCGGGGGSCCTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCC-CCCTTTTTTCTTCCEEECCSS
T ss_pred CCEEECcCCCCCcchhhhhcccCCEEECCCCccc-ccchhhhcCCCCCEEECCCCcCC-ccCHHHhccCCcccEEECcCC
Confidence 9999999999999888888 69999999999999 77876655 68999999999999 899885555999999999999
Q ss_pred cCcccCCC
Q 003847 257 NLTGEIPE 264 (791)
Q Consensus 257 ~l~~~~p~ 264 (791)
++++.++.
T Consensus 479 ~~~c~c~~ 486 (520)
T 2z7x_B 479 PWDCSCPR 486 (520)
T ss_dssp CBCCCHHH
T ss_pred CCcccCCc
Confidence 99987663
No 319
>3vq2_A TLR4, TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, secreted, immune SY; HET: NAG LP4 LP5 DAO MYR; 2.48A {Mus musculus} PDB: 3vq1_A* 2z64_A*
Probab=99.82 E-value=5.3e-20 Score=214.94 Aligned_cols=197 Identities=22% Similarity=0.201 Sum_probs=163.2
Q ss_pred CCCceee----eeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCcc
Q 003847 61 ENPCSWN----GVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLR 132 (791)
Q Consensus 61 ~~~c~w~----gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 132 (791)
.+||.|. .|.|...+- .....+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|+
T Consensus 4 ~~~c~~~~~~~~~~c~~~~l~~ip~~~~~~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~i~~~~~~~l~~L~ 83 (606)
T 3vq2_A 4 LNPCIEVVPNITYQCMDQKLSKVPDDIPSSTKNIDLSFNPLKILKSYSFSNFSELQWLDLSRCEIETIEDKAWHGLHHLS 83 (606)
T ss_dssp --CCEEEETTTEEECTTSCCSSCCTTSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCC
T ss_pred CCCceecCCCCceEccCCCcccCCCCCCCCcCEEECCCCCcCEeChhhccCCccCcEEeCCCCcccccCHHHhhchhhcC
Confidence 3567663 467753110 11246899999999999999888999999999999999999988888999999999
Q ss_pred EEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCC-CCCCCC---cccceeccccc
Q 003847 133 NLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSD-GLPSKF---NSVQVLDLSSN 208 (791)
Q Consensus 133 ~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l---~~L~~L~ls~N 208 (791)
+|+|++|+|++..|..|+++++|++|+|++|++++..+..|.++++|++|+|++|++++ .+|..| ++|++|+|++|
T Consensus 84 ~L~Ls~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~Ls~n 163 (606)
T 3vq2_A 84 NLILTGNPIQSFSPGSFSGLTSLENLVAVETKLASLESFPIGQLITLKKLNVAHNFIHSCKLPAYFSNLTNLVHVDLSYN 163 (606)
T ss_dssp EEECTTCCCCCCCTTSSTTCTTCCEEECTTSCCCCSSSSCCTTCTTCCEEECCSSCCCCCCCCGGGGTCTTCCEEECCSS
T ss_pred EeECCCCcccccChhhcCCcccCCEEEccCCccccccccccCCCCCCCEEeCCCCcccceechHhHhhcCCCCEEEccCC
Confidence 99999999998889999999999999999999998777889999999999999999986 557655 78999999999
Q ss_pred cccccCCCCcCCc-c----ccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCc
Q 003847 209 LINGSLPPDIGGY-S----LRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLT 259 (791)
Q Consensus 209 ~l~~~~p~~~~~~-~----L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~ 259 (791)
++++..|..+... + +.+|++++|.++ .+|...+. ..+|+.|+|++|.++
T Consensus 164 ~l~~~~~~~~~~l~~L~~~l~~L~l~~n~l~-~~~~~~~~-~~~L~~L~L~~n~~~ 217 (606)
T 3vq2_A 164 YIQTITVNDLQFLRENPQVNLSLDMSLNPID-FIQDQAFQ-GIKLHELTLRGNFNS 217 (606)
T ss_dssp CCCEECTTTTHHHHHCTTCCCEEECTTCCCC-EECTTTTT-TCEEEEEEEESCCSC
T ss_pred cceecChhhhhhhhccccccceeeccCCCcc-eeCccccc-CceeeeeeccCCccc
Confidence 9998878777653 3 458999999998 66666666 448899999998875
No 320
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.82 E-value=2.3e-20 Score=216.24 Aligned_cols=203 Identities=21% Similarity=0.240 Sum_probs=167.0
Q ss_pred CcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCC--cccccCCCCccEEEccCCcCCCCCccccCCCCCCCEE
Q 003847 81 SRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSL--SFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLL 158 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~--p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 158 (791)
.+++.|++++|.+.+..+. ..+++|++|+|++|++++.. |..+.++++|++|+|++|.+++..+ .+.++++|+.|
T Consensus 325 ~~L~~L~l~~n~~~~~~~~--~~~~~L~~L~l~~n~l~~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~-~~~~l~~L~~L 401 (570)
T 2z63_A 325 KSLKRLTFTSNKGGNAFSE--VDLPSLEFLDLSRNGLSFKGCCSQSDFGTTSLKYLDLSFNGVITMSS-NFLGLEQLEHL 401 (570)
T ss_dssp SSCCEEEEESCBSCCBCCC--CBCTTCCEEECCSSCCBEEEEEEHHHHTCSCCCEEECCSCSEEEEEE-EEETCTTCCEE
T ss_pred cccCEEeCcCCcccccccc--ccCCCCCEEeCcCCccCccccccccccccCccCEEECCCCccccccc-cccccCCCCEE
Confidence 4455555555555544443 67888999999999988654 7788899999999999999985444 49999999999
Q ss_pred eCcCCcCCCCCc-cccCCCCCCCEEeCCCCcCCCCCCCCC---cccceecccccccc-ccCCCCcCC-ccccEEEccCCc
Q 003847 159 NLSDNALAGKLP-VSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLIN-GSLPPDIGG-YSLRYLNLSYNR 232 (791)
Q Consensus 159 ~ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~-~~~p~~~~~-~~L~~L~l~~N~ 232 (791)
+|++|.+.+..| ..+.++++|++|+|++|++++..|..+ ++|+.|+|++|+++ +.+|..+.. .+|++|+|++|+
T Consensus 402 ~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~p~~~~~l~~L~~L~l~~n~ 481 (570)
T 2z63_A 402 DFQHSNLKQMSEFSVFLSLRNLIYLDISHTHTRVAFNGIFNGLSSLEVLKMAGNSFQENFLPDIFTELRNLTFLDLSQCQ 481 (570)
T ss_dssp ECTTSEEESCTTSCTTTTCTTCCEEECTTSCCEECCTTTTTTCTTCCEEECTTCEEGGGEECSCCTTCTTCCEEECTTSC
T ss_pred EccCCccccccchhhhhcCCCCCEEeCcCCcccccchhhhhcCCcCcEEECcCCcCccccchhhhhcccCCCEEECCCCc
Confidence 999999997766 578899999999999999998887665 78999999999997 678888876 589999999999
Q ss_pred CcccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCCCCCCCC
Q 003847 233 LSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLDLCGQPT 287 (791)
Q Consensus 233 l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~lc~~~~ 287 (791)
+++..|..+.. +++|++|+|++|++++.+|.. ..+..+..+.+.+|++.|+++.
T Consensus 482 l~~~~~~~~~~-l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~~ 536 (570)
T 2z63_A 482 LEQLSPTAFNS-LSSLQVLNMASNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPR 536 (570)
T ss_dssp CCEECTTTTTT-CTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCTTT
T ss_pred cccCChhhhhc-ccCCCEEeCCCCcCCCCCHHHhhcccCCcEEEecCCcccCCCcc
Confidence 99777877766 999999999999999887765 4566788889999999997653
No 321
>4glp_A Monocyte differentiation antigen CD14; alpha beta BENT solenoid, LRR, lipopolysaccharide, serum, CD leucine-rich repeat, pattern recognition; 4.00A {Homo sapiens}
Probab=99.82 E-value=9.7e-21 Score=201.74 Aligned_cols=177 Identities=19% Similarity=0.163 Sum_probs=151.0
Q ss_pred CCCCcEEEEEcCCCCCccCCC----cCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCC--C--cccc
Q 003847 78 NNDSRVIGLALPNSQLLGSIP----ADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGH--L--PETM 149 (791)
Q Consensus 78 ~~~~~v~~L~L~~~~l~~~~~----~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~--~--p~~~ 149 (791)
....+++.|+|++|.+.+..+ ..+..+++|++|+|++|+|.+..+..|.++++|++|+|++|++.+. + +..+
T Consensus 114 ~~~~~L~~L~Ls~n~i~~~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~~ 193 (310)
T 4glp_A 114 ATGLALSSLRLRNVSWATGRSWLAELQQWLKPGLKVLSIAQAHSPAFSCEQVRAFPALTSLDLSDNPGLGERGLMAALCP 193 (310)
T ss_dssp CCCBCCSSCEEESCCCSSTTSSHHHHHTTBCSCCCEEEEECCSSCCCCTTSCCCCTTCCEEECCSCTTCHHHHHHTTSCT
T ss_pred ccCCCCCEEEeecccccchhhhhHHHHhhhccCCCEEEeeCCCcchhhHHHhccCCCCCEEECCCCCCccchhhhHHHhh
Confidence 457789999999999998766 4566899999999999999998899999999999999999998753 2 2334
Q ss_pred CCCCCCCEEeCcCCcCCCCCcc----ccCCCCCCCEEeCCCCcCCCCCCCCC------cccceeccccccccccCCCCcC
Q 003847 150 GSLHNLQLLNLSDNALAGKLPV----SLTTLQSLTIVSLKNNYFSDGLPSKF------NSVQVLDLSSNLINGSLPPDIG 219 (791)
Q Consensus 150 ~~l~~L~~L~ls~N~l~~~~p~----~~~~l~~L~~L~L~~N~l~~~~p~~l------~~L~~L~ls~N~l~~~~p~~~~ 219 (791)
+.+++|++|+|++|+++ .++. .+.++++|++|+|++|+|++..|..+ ++|++|+|++|+|+ .+|..+.
T Consensus 194 ~~l~~L~~L~Ls~N~l~-~l~~~~~~l~~~l~~L~~L~Ls~N~l~~~~p~~~~~~~~~~~L~~L~Ls~N~l~-~lp~~~~ 271 (310)
T 4glp_A 194 HKFPAIQNLALRNTGME-TPTGVCAALAAAGVQPHSLDLSHNSLRATVNPSAPRCMWSSALNSLNLSFAGLE-QVPKGLP 271 (310)
T ss_dssp TSSCCCCSCBCCSSCCC-CHHHHHHHHHHHTCCCSSEECTTSCCCCCCCSCCSSCCCCTTCCCEECCSSCCC-SCCSCCC
T ss_pred hcCCCCCEEECCCCCCC-chHHHHHHHHhcCCCCCEEECCCCCCCccchhhHHhccCcCcCCEEECCCCCCC-chhhhhc
Confidence 78999999999999998 4443 35788999999999999999877543 58999999999999 7787775
Q ss_pred CccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcc
Q 003847 220 GYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTG 260 (791)
Q Consensus 220 ~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~ 260 (791)
.+|++|+|++|+|++ +|. + ..+++|+.|+|++|+|+.
T Consensus 272 -~~L~~L~Ls~N~l~~-~~~-~-~~l~~L~~L~L~~N~l~~ 308 (310)
T 4glp_A 272 -AKLRVLDLSSNRLNR-APQ-P-DELPEVDNLTLDGNPFLV 308 (310)
T ss_dssp -SCCSCEECCSCCCCS-CCC-T-TSCCCCSCEECSSTTTSC
T ss_pred -CCCCEEECCCCcCCC-Cch-h-hhCCCccEEECcCCCCCC
Confidence 799999999999994 454 3 348999999999999974
No 322
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.81 E-value=7e-20 Score=198.56 Aligned_cols=213 Identities=18% Similarity=0.130 Sum_probs=171.4
Q ss_pred ceeeeeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCc-ccccCCCCccE-EEcc
Q 003847 64 CSWNGVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLS-FSLFNASQLRN-LDLS 137 (791)
Q Consensus 64 c~w~gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~-L~L~ 137 (791)
|+|..|.|+..+- .+-..+++.|+|++|+|+.+.+..|.+|++|++|+|++|++.+.+| ..|.++++|+. +.++
T Consensus 9 C~~~~v~C~~~~Lt~iP~~l~~~l~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~ 88 (350)
T 4ay9_X 9 CSNRVFLCQESKVTEIPSDLPRNAIELRFVLTKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEK 88 (350)
T ss_dssp EETTEEEEESTTCCSCCTTCCTTCSEEEEESCCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEE
T ss_pred eeCCEEEecCCCCCccCcCcCCCCCEEEccCCcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhccc
Confidence 7899999963221 0123578999999999998777889999999999999999987665 56889998775 7778
Q ss_pred CCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCC-CcCCCCCCCCC----cccceeccccccccc
Q 003847 138 NNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKN-NYFSDGLPSKF----NSVQVLDLSSNLING 212 (791)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~l----~~L~~L~ls~N~l~~ 212 (791)
+|+|+...|..|.++++|++|++++|+|++..+..+....++..|++.+ |++....+..| ..|+.|+|++|+|+.
T Consensus 89 ~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~ 168 (350)
T 4ay9_X 89 ANNLLYINPEAFQNLPNLQYLLISNTGIKHLPDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQE 168 (350)
T ss_dssp ETTCCEECTTSBCCCTTCCEEEEEEECCSSCCCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCE
T ss_pred CCcccccCchhhhhccccccccccccccccCCchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccC
Confidence 8999988899999999999999999999977777788888899999965 67776555554 468899999999996
Q ss_pred cCCCCcCCccccEEEccC-CcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCC
Q 003847 213 SLPPDIGGYSLRYLNLSY-NRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGN 279 (791)
Q Consensus 213 ~~p~~~~~~~L~~L~l~~-N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n 279 (791)
..+..+...+|++|++++ |.++ .||...+..+++|++|||++|+|+...+. .+.++..+...++
T Consensus 169 i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f~~l~~L~~LdLs~N~l~~lp~~--~~~~L~~L~~l~~ 233 (350)
T 4ay9_X 169 IHNSAFNGTQLDELNLSDNNNLE-ELPNDVFHGASGPVILDISRTRIHSLPSY--GLENLKKLRARST 233 (350)
T ss_dssp ECTTSSTTEEEEEEECTTCTTCC-CCCTTTTTTEECCSEEECTTSCCCCCCSS--SCTTCCEEECTTC
T ss_pred CChhhccccchhHHhhccCCccc-CCCHHHhccCcccchhhcCCCCcCccChh--hhccchHhhhccC
Confidence 555566668999999985 6666 99988877799999999999999955442 3455555555554
No 323
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.81 E-value=8.4e-20 Score=214.14 Aligned_cols=198 Identities=23% Similarity=0.156 Sum_probs=158.7
Q ss_pred CCceee----eeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccE
Q 003847 62 NPCSWN----GVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRN 133 (791)
Q Consensus 62 ~~c~w~----gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 133 (791)
+||.+. -|.|...+- .+-+..++.|+|++|+|+++.+..|.++++|++|+|++|+|++..|..|.++++|++
T Consensus 25 ~~c~~~~~~~~~~c~~~~l~~vP~~lp~~~~~LdLs~N~i~~l~~~~f~~l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~ 104 (635)
T 4g8a_A 25 EPCVEVVPNITYQCMELNFYKIPDNLPFSTKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLST 104 (635)
T ss_dssp CCSEEEETTTEEECTTSCCSSCCSSSCTTCCEEECTTSCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCE
T ss_pred CCccccCCCCEEECCCCCcCccCCCCCcCCCEEEeeCCCCCCCCHHHHhCCCCCCEEECCCCcCCCcChhHhcCCCCCCE
Confidence 456553 367863221 112357899999999999888889999999999999999999877888999999999
Q ss_pred EEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCC-CCCC---Ccccceecccccc
Q 003847 134 LDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDG-LPSK---FNSVQVLDLSSNL 209 (791)
Q Consensus 134 L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~-~p~~---l~~L~~L~ls~N~ 209 (791)
|+|++|+|++..+..|.+|++|++|+|++|+|++..+..|+++++|++|+|++|++++. +|.. +++|++|+|++|+
T Consensus 105 L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~ 184 (635)
T 4g8a_A 105 LILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNK 184 (635)
T ss_dssp EECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECCSSC
T ss_pred EEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeeccccCccccCCCchhhccchhhhhhcccCcc
Confidence 99999999977778899999999999999999987777899999999999999999864 4544 4789999999999
Q ss_pred ccccCCCCcCCc-----cccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCccc
Q 003847 210 INGSLPPDIGGY-----SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGE 261 (791)
Q Consensus 210 l~~~~p~~~~~~-----~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~ 261 (791)
|++..+..+... .+..++++.|.++ .++...+. ...+..+++.+|.....
T Consensus 185 l~~~~~~~l~~L~~l~~~~~~~~ls~n~l~-~i~~~~~~-~~~~~~l~l~~n~~~~~ 239 (635)
T 4g8a_A 185 IQSIYCTDLRVLHQMPLLNLSLDLSLNPMN-FIQPGAFK-EIRLHKLTLRNNFDSLN 239 (635)
T ss_dssp CCEECGGGGHHHHTCTTCCCEEECTTCCCC-EECTTTTT-TCEEEEEEEESCCSSHH
T ss_pred ccccccccccchhhhhhhhhhhhcccCccc-ccCccccc-chhhhhhhhhccccccc
Confidence 998777776542 3557889999998 56666555 55677888888876543
No 324
>3j0a_A TOLL-like receptor 5; membrane protein, leucine-rich repeat, asymmetric homodimer, glycoprotein, immune system; HET: NAG FUC; 26.00A {Homo sapiens}
Probab=99.81 E-value=1.6e-19 Score=218.72 Aligned_cols=116 Identities=19% Similarity=0.088 Sum_probs=49.3
Q ss_pred CCCCcEEEEEcCCCCCccCC-CcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccc--cCCCCC
Q 003847 78 NNDSRVIGLALPNSQLLGSI-PADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPET--MGSLHN 154 (791)
Q Consensus 78 ~~~~~v~~L~L~~~~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~--~~~l~~ 154 (791)
....+++.|+|++|++.+.+ |..|.+|++|++|+|++|+|++..|..|.++++|++|+|++|.|++.+|.. |+++++
T Consensus 45 ~~l~~L~~LdLs~n~~~~~i~~~~f~~L~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~~~L~~ 124 (844)
T 3j0a_A 45 PFLEQLQLLELGSQYTPLTIDKEAFRNLPNLRILDLGSSKIYFLHPDAFQGLFHLFELRLYFCGLSDAVLKDGYFRNLKA 124 (844)
T ss_dssp SSCCSCSEEEECTTCCCCEECTTTTSSCTTCCEEECTTCCCCEECTTSSCSCSSCCCEECTTCCCSSCCSTTCCCSSCSS
T ss_pred cccccCeEEeCCCCCCccccCHHHhcCCCCCCEEECCCCcCcccCHhHccCCcccCEeeCcCCCCCcccccCccccccCC
Confidence 33344444444444333333 333444444444444444444444444444444444444444444333332 444444
Q ss_pred CCEEeCcCCcCCCCCc-cccCCCCCCCEEeCCCCcCCCCC
Q 003847 155 LQLLNLSDNALAGKLP-VSLTTLQSLTIVSLKNNYFSDGL 193 (791)
Q Consensus 155 L~~L~ls~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~ 193 (791)
|++|+|++|.+++..+ ..|.++++|++|+|++|.+++..
T Consensus 125 L~~L~Ls~N~l~~~~~~~~~~~L~~L~~L~Ls~N~i~~~~ 164 (844)
T 3j0a_A 125 LTRLDLSKNQIRSLYLHPSFGKLNSLKSIDFSSNQIFLVC 164 (844)
T ss_dssp CCEEEEESCCCCCCCCCGGGGTCSSCCEEEEESSCCCCCC
T ss_pred CCEEECCCCcccccccchhHhhCCCCCEEECCCCcCCeeC
Confidence 4444444444443322 23444444444444444444433
No 325
>2xwt_C Thyrotropin receptor; signaling protein-immune system complex, GPCR, graves' disea autoimmunity, receptor-autoantibody complex; HET: NAG BMA MAN; 1.90A {Homo sapiens} PDB: 3g04_C*
Probab=99.81 E-value=6.3e-20 Score=187.66 Aligned_cols=178 Identities=15% Similarity=0.127 Sum_probs=155.0
Q ss_pred CCCCCCCCcEEEEEcCCCC-CccCCCcCCCCCCCCCEEeCcC-CCCCCCCcccccCCCCccEEEccCCcCCCCCccccCC
Q 003847 74 PGEGNNDSRVIGLALPNSQ-LLGSIPADLGMIEFLQYLDLSN-NSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGS 151 (791)
Q Consensus 74 ~~~~~~~~~v~~L~L~~~~-l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 151 (791)
+..+....+++.|+|++|+ +++..+..|..+++|++|+|++ |+|++..+..|.++++|++|+|++|+|++ +|. |.+
T Consensus 48 ~~~~~~l~~L~~L~l~~n~~l~~i~~~~f~~l~~L~~L~l~~~n~l~~i~~~~f~~l~~L~~L~l~~n~l~~-lp~-~~~ 125 (239)
T 2xwt_C 48 SHAFSNLPNISRIYVSIDVTLQQLESHSFYNLSKVTHIEIRNTRNLTYIDPDALKELPLLKFLGIFNTGLKM-FPD-LTK 125 (239)
T ss_dssp TTTTTTCTTCCEEEEECCSSCCEECTTTEESCTTCCEEEEEEETTCCEECTTSEECCTTCCEEEEEEECCCS-CCC-CTT
T ss_pred HHHccCCCCCcEEeCCCCCCcceeCHhHcCCCcCCcEEECCCCCCeeEcCHHHhCCCCCCCEEeCCCCCCcc-ccc-ccc
Confidence 4456778899999999997 8887778999999999999999 99997777889999999999999999996 776 899
Q ss_pred CCCCC---EEeCcCC-cCCCCCccccCCCCCCC-EEeCCCCcCCCCCCCCC--cccceecccccc-ccccCCCCcCC--c
Q 003847 152 LHNLQ---LLNLSDN-ALAGKLPVSLTTLQSLT-IVSLKNNYFSDGLPSKF--NSVQVLDLSSNL-INGSLPPDIGG--Y 221 (791)
Q Consensus 152 l~~L~---~L~ls~N-~l~~~~p~~~~~l~~L~-~L~L~~N~l~~~~p~~l--~~L~~L~ls~N~-l~~~~p~~~~~--~ 221 (791)
+++|+ +|+|++| ++++..+..|.++++|+ .|+|++|+++...+..| ++|+.|+|++|+ |++..+..+.. .
T Consensus 126 l~~L~~L~~L~l~~N~~l~~i~~~~~~~l~~L~~~L~l~~n~l~~i~~~~~~~~~L~~L~L~~n~~l~~i~~~~~~~l~~ 205 (239)
T 2xwt_C 126 VYSTDIFFILEITDNPYMTSIPVNAFQGLCNETLTLKLYNNGFTSVQGYAFNGTKLDAVYLNKNKYLTVIDKDAFGGVYS 205 (239)
T ss_dssp CCBCCSEEEEEEESCTTCCEECTTTTTTTBSSEEEEECCSCCCCEECTTTTTTCEEEEEECTTCTTCCEECTTTTTTCSB
T ss_pred ccccccccEEECCCCcchhhcCcccccchhcceeEEEcCCCCCcccCHhhcCCCCCCEEEcCCCCCcccCCHHHhhcccc
Confidence 99998 9999999 99977778899999999 99999999995444444 689999999995 98666667765 4
Q ss_pred cccEEEccCCcCcccCchhHhhcCCCCcEEEcccCc
Q 003847 222 SLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNN 257 (791)
Q Consensus 222 ~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~ 257 (791)
+|++|+|++|+|+ .+|.. .+++|+.|+++++.
T Consensus 206 ~L~~L~l~~N~l~-~l~~~---~~~~L~~L~l~~~~ 237 (239)
T 2xwt_C 206 GPSLLDVSQTSVT-ALPSK---GLEHLKELIARNTW 237 (239)
T ss_dssp CCSEEECTTCCCC-CCCCT---TCTTCSEEECTTC-
T ss_pred CCcEEECCCCccc-cCChh---HhccCceeeccCcc
Confidence 8999999999999 77776 38899999998763
No 326
>3cvr_A Invasion plasmid antigen; leucine rich repeat and alpha fold, ligase; 2.80A {Shigella flexneri 2A}
Probab=99.80 E-value=2.1e-19 Score=205.40 Aligned_cols=162 Identities=33% Similarity=0.487 Sum_probs=142.8
Q ss_pred CcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeC
Q 003847 81 SRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNL 160 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 160 (791)
.+++.|+|++|+|+ .+| ..+++|++|+|++|+|++ +|. |.+ +|++|+|++|+|++ +|. .+++|+.|+|
T Consensus 80 ~~L~~L~Ls~N~l~-~ip---~~l~~L~~L~Ls~N~l~~-ip~-l~~--~L~~L~Ls~N~l~~-lp~---~l~~L~~L~L 147 (571)
T 3cvr_A 80 PQITVLEITQNALI-SLP---ELPASLEYLDACDNRLST-LPE-LPA--SLKHLDVDNNQLTM-LPE---LPALLEYINA 147 (571)
T ss_dssp TTCSEEECCSSCCS-CCC---CCCTTCCEEECCSSCCSC-CCC-CCT--TCCEEECCSSCCSC-CCC---CCTTCCEEEC
T ss_pred CCCCEEECcCCCCc-ccc---cccCCCCEEEccCCCCCC-cch-hhc--CCCEEECCCCcCCC-CCC---cCccccEEeC
Confidence 57999999999998 566 568999999999999997 776 665 99999999999996 776 6899999999
Q ss_pred cCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC-cccceeccccccccccCCCCcCCccc-------cEEEccCCc
Q 003847 161 SDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF-NSVQVLDLSSNLINGSLPPDIGGYSL-------RYLNLSYNR 232 (791)
Q Consensus 161 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l-~~L~~L~ls~N~l~~~~p~~~~~~~L-------~~L~l~~N~ 232 (791)
++|+|++ +|. .+++|+.|+|++|+|++ +|. | ++|+.|+|++|+|+ .+|. +.. +| ++|+|++|+
T Consensus 148 s~N~l~~-lp~---~l~~L~~L~Ls~N~L~~-lp~-l~~~L~~L~Ls~N~L~-~lp~-~~~-~L~~~~~~L~~L~Ls~N~ 218 (571)
T 3cvr_A 148 DNNQLTM-LPE---LPTSLEVLSVRNNQLTF-LPE-LPESLEALDVSTNLLE-SLPA-VPV-RNHHSEETEIFFRCRENR 218 (571)
T ss_dssp CSSCCSC-CCC---CCTTCCEEECCSSCCSC-CCC-CCTTCCEEECCSSCCS-SCCC-CC---------CCEEEECCSSC
T ss_pred CCCccCc-CCC---cCCCcCEEECCCCCCCC-cch-hhCCCCEEECcCCCCC-chhh-HHH-hhhcccccceEEecCCCc
Confidence 9999996 665 67899999999999998 665 5 79999999999999 7777 655 77 999999999
Q ss_pred CcccCchhHhhcCCCCcEEEcccCcCcccCCCC
Q 003847 233 LSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES 265 (791)
Q Consensus 233 l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~ 265 (791)
|+ .||..++. +++|+.|+|++|+|++.+|..
T Consensus 219 l~-~lp~~l~~-l~~L~~L~L~~N~l~~~~p~~ 249 (571)
T 3cvr_A 219 IT-HIPENILS-LDPTCTIILEDNPLSSRIRES 249 (571)
T ss_dssp CC-CCCGGGGG-SCTTEEEECCSSSCCHHHHHH
T ss_pred ce-ecCHHHhc-CCCCCEEEeeCCcCCCcCHHH
Confidence 99 89999998 999999999999999988865
No 327
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.80 E-value=2.7e-19 Score=190.27 Aligned_cols=188 Identities=19% Similarity=0.301 Sum_probs=136.8
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|++++|++.. ++ .+..+++|++|+|++|+|++..+ +.++++|++|+|++|+|++ ++ .+.++++|++|+
T Consensus 40 l~~L~~L~l~~~~i~~-l~-~~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~-~~-~~~~l~~L~~L~ 113 (308)
T 1h6u_A 40 LDGITTLSAFGTGVTT-IE-GVQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKN-VS-AIAGLQSIKTLD 113 (308)
T ss_dssp HHTCCEEECTTSCCCC-CT-TGGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSC-CG-GGTTCTTCCEEE
T ss_pred cCCcCEEEeeCCCccC-ch-hhhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCC-ch-hhcCCCCCCEEE
Confidence 4577888888888765 33 57788888888888888875444 7888888888888888874 34 578888888888
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC-CCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccC
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP-SKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEI 237 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~i 237 (791)
|++|++++ ++. +..+++|++|+|++|++++..+ ..+++|+.|+|++|+|++. +. +.. .+|++|+|++|+++ .+
T Consensus 114 l~~n~l~~-~~~-l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~-~~-l~~l~~L~~L~l~~n~l~-~~ 188 (308)
T 1h6u_A 114 LTSTQITD-VTP-LAGLSNLQVLYLDLNQITNISPLAGLTNLQYLSIGNAQVSDL-TP-LANLSKLTTLKADDNKIS-DI 188 (308)
T ss_dssp CTTSCCCC-CGG-GTTCTTCCEEECCSSCCCCCGGGGGCTTCCEEECCSSCCCCC-GG-GTTCTTCCEEECCSSCCC-CC
T ss_pred CCCCCCCC-chh-hcCCCCCCEEECCCCccCcCccccCCCCccEEEccCCcCCCC-hh-hcCCCCCCEEECCCCccC-cC
Confidence 88888875 343 7888888888888888877543 2347788888888888753 33 444 57888888888887 44
Q ss_pred chhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCC
Q 003847 238 PPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLD 281 (791)
Q Consensus 238 p~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 281 (791)
+. +.. +++|++|+|++|++++..| ...+.++..+.+.+|+.
T Consensus 189 ~~-l~~-l~~L~~L~L~~N~l~~~~~-l~~l~~L~~L~l~~N~i 229 (308)
T 1h6u_A 189 SP-LAS-LPNLIEVHLKNNQISDVSP-LANTSNLFIVTLTNQTI 229 (308)
T ss_dssp GG-GGG-CTTCCEEECTTSCCCBCGG-GTTCTTCCEEEEEEEEE
T ss_pred hh-hcC-CCCCCEEEccCCccCcccc-ccCCCCCCEEEccCCee
Confidence 44 433 8888888888888886654 34455666666777764
No 328
>3o53_A Protein LRIM1, AGAP006348-PA; leucine-rich repeat, protein binding; HET: NAG; 2.00A {Anopheles gambiae}
Probab=99.80 E-value=2.6e-20 Score=199.13 Aligned_cols=188 Identities=28% Similarity=0.224 Sum_probs=148.5
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|+|++|++++..|..|..+++|++|+|++|+|++..+ |..+++|++|+|++|+|++. + .+++|++|+
T Consensus 33 ~~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~Ls~n~l~~~~~--~~~l~~L~~L~Ls~n~l~~l-~----~~~~L~~L~ 105 (317)
T 3o53_A 33 AWNVKELDLSGNPLSQISAADLAPFTKLELLNLSSNVLYETLD--LESLSTLRTLDLNNNYVQEL-L----VGPSIETLH 105 (317)
T ss_dssp GGGCSEEECTTSCCCCCCHHHHTTCTTCCEEECTTSCCEEEEE--ETTCTTCCEEECCSSEEEEE-E----ECTTCCEEE
T ss_pred CCCCCEEECcCCccCcCCHHHhhCCCcCCEEECCCCcCCcchh--hhhcCCCCEEECcCCccccc-c----CCCCcCEEE
Confidence 4578899999999988877889999999999999999886554 88889999999999998843 2 337899999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC--ccccEEEccCCcCc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG--YSLRYLNLSYNRLS 234 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~--~~L~~L~l~~N~l~ 234 (791)
|++|++++..+.. +++|++|+|++|++++..+..+ ++|++|+|++|+|++..+..+.. .+|++|+|++|+|+
T Consensus 106 l~~n~l~~~~~~~---~~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~ 182 (317)
T 3o53_A 106 AANNNISRVSCSR---GQGKKNIYLANNKITMLRDLDEGCRSRVQYLDLKLNEIDTVNFAELAASSDTLEHLNLQYNFIY 182 (317)
T ss_dssp CCSSCCSEEEECC---CSSCEEEECCSSCCCSGGGBCTGGGSSEEEEECTTSCCCEEEGGGGGGGTTTCCEEECTTSCCC
T ss_pred CCCCccCCcCccc---cCCCCEEECCCCCCCCccchhhhccCCCCEEECCCCCCCcccHHHHhhccCcCCEEECCCCcCc
Confidence 9999998655443 5778999999999988766554 78899999999998777766642 58999999999998
Q ss_pred ccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCC
Q 003847 235 GEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNL 280 (791)
Q Consensus 235 g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 280 (791)
.+|... . +++|+.|+|++|++++..+....+.++..+.+.+|.
T Consensus 183 -~~~~~~-~-l~~L~~L~Ls~N~l~~l~~~~~~l~~L~~L~L~~N~ 225 (317)
T 3o53_A 183 -DVKGQV-V-FAKLKTLDLSSNKLAFMGPEFQSAAGVTWISLRNNK 225 (317)
T ss_dssp -EEECCC-C-CTTCCEEECCSSCCCEECGGGGGGTTCSEEECTTSC
T ss_pred -cccccc-c-cccCCEEECCCCcCCcchhhhcccCcccEEECcCCc
Confidence 445443 2 888999999999998776665555667777777764
No 329
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.80 E-value=1.5e-19 Score=196.74 Aligned_cols=174 Identities=29% Similarity=0.259 Sum_probs=136.1
Q ss_pred EEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCccccc-CCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCC
Q 003847 85 GLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLF-NASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDN 163 (791)
Q Consensus 85 ~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 163 (791)
.+++++++|+. +|..+. ..|+.|+|++|+|++..+..|. ++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 22 ~l~c~~~~l~~-iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 98 (361)
T 2xot_A 22 ILSCSKQQLPN-VPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSSN 98 (361)
T ss_dssp EEECCSSCCSS-CCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EEEeCCCCcCc-cCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCCC
Confidence 45666777764 565554 4588999999999977777777 8999999999999999777788999999999999999
Q ss_pred cCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCc---C-CccccEEEccCCcCccc
Q 003847 164 ALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDI---G-GYSLRYLNLSYNRLSGE 236 (791)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~---~-~~~L~~L~l~~N~l~g~ 236 (791)
+|++..+..|.++++|+.|+|++|+|++..|..| ++|+.|+|++|+|++..+..+ . ..+|++|+|++|+|+ .
T Consensus 99 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~l~~~~~~~~~~l~~L~~L~L~~N~l~-~ 177 (361)
T 2xot_A 99 HLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQISRFPVELIKDGNKLPKLMLLDLSSNKLK-K 177 (361)
T ss_dssp CCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCCSCCGGGTC----CTTCCEEECCSSCCC-C
T ss_pred cCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCCeeCHHHhcCcccCCcCCEEECCCCCCC-c
Confidence 9997777788999999999999999988766655 678888888888885433333 2 258999999999998 6
Q ss_pred CchhHhhcCCC--CcEEEcccCcCcccC
Q 003847 237 IPPQFGEKIPV--NATIDLSFNNLTGEI 262 (791)
Q Consensus 237 ip~~~~~~l~~--l~~l~l~~N~l~~~~ 262 (791)
+|...+..++. ++.|+|++|++.+..
T Consensus 178 l~~~~~~~l~~~~l~~l~l~~N~~~C~C 205 (361)
T 2xot_A 178 LPLTDLQKLPAWVKNGLYLHNNPLECDC 205 (361)
T ss_dssp CCHHHHHHSCHHHHTTEECCSSCEECCH
T ss_pred cCHHHhhhccHhhcceEEecCCCccCCc
Confidence 66554444776 377888888887543
No 330
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.80 E-value=7.6e-20 Score=184.41 Aligned_cols=147 Identities=25% Similarity=0.270 Sum_probs=109.2
Q ss_pred EEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCc-ccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCC
Q 003847 85 GLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLS-FSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDN 163 (791)
Q Consensus 85 ~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 163 (791)
.|++++|+++. +|..+. ..+++|+|++|+|++..+ ..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~~-iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLNK-IPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCSS-CCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCccc-CccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 79999999975 566654 457899999999997755 45889999999999999999888888999999999999999
Q ss_pred cCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCc
Q 003847 164 ALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLS 234 (791)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~ 234 (791)
+|++..+..|.++++|++|+|++|+|++..|..| ++|++|+|++|+|++..|..+.. .+|++|+|++|.++
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 166 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDTLHSLSTLNLLANPFN 166 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTTCTTCCEEECCSCCEE
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcCCCCCCEEEecCcCCc
Confidence 9998888889999999999999998887666544 34444444444444433433332 23333333333333
No 331
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.80 E-value=3.1e-19 Score=179.96 Aligned_cols=147 Identities=25% Similarity=0.262 Sum_probs=100.4
Q ss_pred CCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCC
Q 003847 90 NSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKL 169 (791)
Q Consensus 90 ~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~ 169 (791)
+++++ .+|..+. ++|+.|+|++|+|++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|+|+...
T Consensus 20 ~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~ 96 (220)
T 2v9t_B 20 GKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGNKITELP 96 (220)
T ss_dssp TSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSSCCCCCC
T ss_pred CCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCCcCCccC
Confidence 45554 3455444 67888888888888777778888888888888888888777888888888888888888888666
Q ss_pred ccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCC
Q 003847 170 PVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVN 248 (791)
Q Consensus 170 p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l 248 (791)
+..|.++++|++|+|++|+|++..|..| .. .+|++|+|++|+|+ .++...+..+++|
T Consensus 97 ~~~f~~l~~L~~L~L~~N~l~~~~~~~~---------------------~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L 154 (220)
T 2v9t_B 97 KSLFEGLFSLQLLLLNANKINCLRVDAF---------------------QDLHNLNLLSLYDNKLQ-TIAKGTFSPLRAI 154 (220)
T ss_dssp TTTTTTCTTCCEEECCSSCCCCCCTTTT---------------------TTCTTCCEEECCSSCCS-CCCTTTTTTCTTC
T ss_pred HhHccCCCCCCEEECCCCCCCEeCHHHc---------------------CCCCCCCEEECCCCcCC-EECHHHHhCCCCC
Confidence 6667788888888888888777555443 22 24444555555554 2332222235666
Q ss_pred cEEEcccCcCccc
Q 003847 249 ATIDLSFNNLTGE 261 (791)
Q Consensus 249 ~~l~l~~N~l~~~ 261 (791)
+.|+|++|++++.
T Consensus 155 ~~L~L~~N~~~c~ 167 (220)
T 2v9t_B 155 QTMHLAQNPFICD 167 (220)
T ss_dssp CEEECCSSCEECS
T ss_pred CEEEeCCCCcCCC
Confidence 6666666666543
No 332
>2z63_A TOLL-like receptor 4, variable lymphocyte recepto; TLR4, MD-2, LPS, immune system; HET: NAG FUL; 2.00A {Homo sapiens}
Probab=99.80 E-value=2.4e-19 Score=207.62 Aligned_cols=153 Identities=25% Similarity=0.232 Sum_probs=81.5
Q ss_pred cEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCc
Q 003847 82 RVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLS 161 (791)
Q Consensus 82 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 161 (791)
+++.|+|++|++++..+..|.++++|++|+|++|+|++..|..|.++++|++|+|++|++++..|..|+++++|++|+|+
T Consensus 29 ~l~~L~Ls~n~l~~~~~~~~~~l~~L~~L~Ls~n~i~~i~~~~~~~l~~L~~L~L~~n~l~~~~~~~~~~l~~L~~L~L~ 108 (570)
T 2z63_A 29 STKNLDLSFNPLRHLGSYSFFSFPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAV 108 (570)
T ss_dssp SCCEEECCSCCCCEECTTTTTTCSSCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECTTTTTTCTTCCEEECT
T ss_pred cccEEEccCCccCccChhHhhCCCCceEEECCCCcCCccCcccccCchhCCEEeCcCCcCCccCHhhhcCcccccccccc
Confidence 45555555555555555555555555555555555555445555555555555555555555555555555555555555
Q ss_pred CCcCCCCCccccCCCCCCCEEeCCCCcCCC-CCCCCC---cccceeccccccccccCCCCcCC-ccc----cEEEccCCc
Q 003847 162 DNALAGKLPVSLTTLQSLTIVSLKNNYFSD-GLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSL----RYLNLSYNR 232 (791)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~-~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L----~~L~l~~N~ 232 (791)
+|++++..+..|.++++|++|+|++|.+++ .+|..| ++|++|+|++|++++..+..+.. .+| +.|++++|.
T Consensus 109 ~n~l~~l~~~~~~~l~~L~~L~L~~n~l~~~~lp~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~~~~~L~l~~n~ 188 (570)
T 2z63_A 109 ETNLASLENFPIGHLKTLKELNVAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRVLHQMPLLNLSLDLSLNP 188 (570)
T ss_dssp TSCCCCSTTCSCTTCTTCCEEECCSSCCCCCCCCGGGGGCTTCCEEECTTSCCCEECGGGGHHHHTCTTCCCEEECTTCC
T ss_pred ccccccCCCccccccccccEEecCCCccceecChhhhcccCCCCEEeCcCCccceecHHHccchhccchhhhhcccCCCC
Confidence 555554444445555555555555555554 234433 45555555555555444433333 123 444444444
Q ss_pred Cc
Q 003847 233 LS 234 (791)
Q Consensus 233 l~ 234 (791)
++
T Consensus 189 l~ 190 (570)
T 2z63_A 189 MN 190 (570)
T ss_dssp CC
T ss_pred ce
Confidence 44
No 333
>2v70_A SLIT-2, SLIT homolog 2 protein N-product; neurogenesis, glycoprotein, secreted, chemotaxis, LRR structural protein, differentiation; HET: NAG; 3.01A {Homo sapiens}
Probab=99.79 E-value=5.2e-19 Score=178.28 Aligned_cols=151 Identities=23% Similarity=0.226 Sum_probs=84.5
Q ss_pred EEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCc-cccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCC
Q 003847 109 YLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLP-ETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNN 187 (791)
Q Consensus 109 ~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N 187 (791)
.|++++|.|+ .+|..+. ..+++|+|++|+|++..| ..|.++++|+.|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~l~~s~n~l~-~iP~~~~--~~~~~L~L~~N~l~~~~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~N 91 (220)
T 2v70_A 15 TVDCSNQKLN-KIPEHIP--QYTAELRLNNNEFTVLEATGIFKKLPQLRKINFSNNKITDIEEGAFEGASGVNEILLTSN 91 (220)
T ss_dssp EEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCEECCCCCGGGCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSS
T ss_pred EeEeCCCCcc-cCccCCC--CCCCEEEcCCCcCCccCchhhhccCCCCCEEECCCCcCCEECHHHhCCCCCCCEEECCCC
Confidence 5666666665 3444332 234566666666664433 33556666666666666666555555666666666666666
Q ss_pred cCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCC
Q 003847 188 YFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIP 263 (791)
Q Consensus 188 ~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p 263 (791)
+|++..+..| ++|++|+|++|+|++..|..+.. .+|++|+|++|+|++..|..+.. +++|+.|+|++|+|++..+
T Consensus 92 ~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~c~c~ 170 (220)
T 2v70_A 92 RLENVQHKMFKGLESLKTLMLRSNRITCVGNDSFIGLSSVRLLSLYDNQITTVAPGAFDT-LHSLSTLNLLANPFNCNCY 170 (220)
T ss_dssp CCCCCCGGGGTTCSSCCEEECTTSCCCCBCTTSSTTCTTCSEEECTTSCCCCBCTTTTTT-CTTCCEEECCSCCEECSGG
T ss_pred ccCccCHhHhcCCcCCCEEECCCCcCCeECHhHcCCCccCCEEECCCCcCCEECHHHhcC-CCCCCEEEecCcCCcCCCc
Confidence 6655544332 45666666666666555555544 35666666666666444444443 6666666666666655443
No 334
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.79 E-value=1.2e-20 Score=223.52 Aligned_cols=222 Identities=19% Similarity=0.228 Sum_probs=132.3
Q ss_pred ChhhHHHHHHHHhhccCCCCCccCCCCCCCCCCceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEE
Q 003847 31 LNTDGVLLLSFKYSVLSDPLGVLGSWNYNDENPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYL 110 (791)
Q Consensus 31 ~~~~~~~ll~~k~~~~~~~~~~l~sw~~~~~~~c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L 110 (791)
...+..+|+++...........-.+|.......+.|.++.++ .++++.|+|.+|++... +..+ |+.|
T Consensus 130 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s-------~~~~~~l~L~~n~~~~~-~~~~-----l~~l 196 (727)
T 4b8c_D 130 VDCTKQALMEMADTLTDSKTAKKQQPTGDSTPSGTATNSAVS-------TPLTPKIELFANGKDEA-NQAL-----LQHK 196 (727)
T ss_dssp --CCCHHHHHHHHHHHHHHTTC----------------------------------------------------------
T ss_pred cccchhhhhhhhhhcccccCcccCCCcCCCCccccCCCceec-------CCccceEEeeCCCCCcc-hhhH-----hhcC
Confidence 345678899888776544455556776555566789999987 56899999999998764 3322 3334
Q ss_pred eCcCCCCCC---------CCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCE
Q 003847 111 DLSNNSLNG---------SLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTI 181 (791)
Q Consensus 111 ~L~~N~l~~---------~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~ 181 (791)
+|+.|.|.+ ..|..|..+++|+.|+|++|.|. .+|..+.++++|++|+|++|+|+ .+|..|.+|++|++
T Consensus 197 ~Ls~~~i~~~~~~~n~~~~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~ 274 (727)
T 4b8c_D 197 KLSQYSIDEDDDIENRMVMPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRV 274 (727)
T ss_dssp -------------------------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCE
T ss_pred ccCcccccCccccccceecChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCE
Confidence 444444432 45788999999999999999998 78888889999999999999999 88999999999999
Q ss_pred EeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCc
Q 003847 182 VSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNN 257 (791)
Q Consensus 182 L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~ 257 (791)
|+|++|+|+ .+|..| ++|++|+|++|.|+ .+|..|+. .+|++|+|++|.|+|.+|..+......+..|+|++|.
T Consensus 275 L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~ 352 (727)
T 4b8c_D 275 LDLSHNRLT-SLPAELGSCFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNR 352 (727)
T ss_dssp EECTTSCCS-SCCSSGGGGTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCC
T ss_pred EeCcCCcCC-ccChhhcCCCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCc
Confidence 999999999 567766 78999999999997 78888877 5899999999999999888876522233457899999
Q ss_pred CcccCCCCCccc
Q 003847 258 LTGEIPESNVFM 269 (791)
Q Consensus 258 l~~~~p~~~~~~ 269 (791)
++|.+|....+.
T Consensus 353 l~~~~p~~l~~l 364 (727)
T 4b8c_D 353 PEIPLPHERRFI 364 (727)
T ss_dssp CCCCCCCC----
T ss_pred ccCcCcccccee
Confidence 999999865443
No 335
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.79 E-value=1.8e-19 Score=196.13 Aligned_cols=176 Identities=26% Similarity=0.186 Sum_probs=148.6
Q ss_pred CEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccC-CCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCC
Q 003847 108 QYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMG-SLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKN 186 (791)
Q Consensus 108 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~-~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~ 186 (791)
+.+++++|+|+ .+|..+. ..|+.|+|++|+|++..+..|. ++++|+.|+|++|+|++..+..|.++++|++|+|++
T Consensus 21 ~~l~c~~~~l~-~iP~~~~--~~l~~L~Ls~N~l~~l~~~~~~~~l~~L~~L~L~~N~i~~i~~~~~~~l~~L~~L~Ls~ 97 (361)
T 2xot_A 21 NILSCSKQQLP-NVPQSLP--SYTALLDLSHNNLSRLRAEWTPTRLTNLHSLLLSHNHLNFISSEAFVPVPNLRYLDLSS 97 (361)
T ss_dssp TEEECCSSCCS-SCCSSCC--TTCSEEECCSSCCCEECTTSSSSCCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCS
T ss_pred CEEEeCCCCcC-ccCccCC--CCCCEEECCCCCCCccChhhhhhcccccCEEECCCCcCCccChhhccCCCCCCEEECCC
Confidence 58999999999 5676654 4689999999999988888887 999999999999999988888999999999999999
Q ss_pred CcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHh---hcCCCCcEEEcccCcCc
Q 003847 187 NYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFG---EKIPVNATIDLSFNNLT 259 (791)
Q Consensus 187 N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~---~~l~~l~~l~l~~N~l~ 259 (791)
|+|++..+..| ++|+.|+|++|+|++..|..+.. .+|++|+|++|+|+ .+|..++ ..+++|+.|||++|+|+
T Consensus 98 N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~-~l~~~~~~~~~~l~~L~~L~L~~N~l~ 176 (361)
T 2xot_A 98 NHLHTLDEFLFSDLQALEVLLLYNNHIVVVDRNAFEDMAQLQKLYLSQNQIS-RFPVELIKDGNKLPKLMLLDLSSNKLK 176 (361)
T ss_dssp SCCCEECTTTTTTCTTCCEEECCSSCCCEECTTTTTTCTTCCEEECCSSCCC-SCCGGGTC----CTTCCEEECCSSCCC
T ss_pred CcCCcCCHHHhCCCcCCCEEECCCCcccEECHHHhCCcccCCEEECCCCcCC-eeCHHHhcCcccCCcCCEEECCCCCCC
Confidence 99998766554 78999999999999888888877 58999999999999 7888775 34999999999999999
Q ss_pred ccCCCCCc-ccc--cccccccCCCCCCCCCC
Q 003847 260 GEIPESNV-FMN--QESSSFSGNLDLCGQPT 287 (791)
Q Consensus 260 ~~~p~~~~-~~~--~~~~~~~~n~~lc~~~~ 287 (791)
+..+.... +.. +..+.+.+|+|.|+|.+
T Consensus 177 ~l~~~~~~~l~~~~l~~l~l~~N~~~C~C~l 207 (361)
T 2xot_A 177 KLPLTDLQKLPAWVKNGLYLHNNPLECDCKL 207 (361)
T ss_dssp CCCHHHHHHSCHHHHTTEECCSSCEECCHHH
T ss_pred ccCHHHhhhccHhhcceEEecCCCccCCcCc
Confidence 65443221 111 25678999999998754
No 336
>2v9t_B SLIT homolog 2 protein N-product; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens} PDB: 2v9s_A
Probab=99.79 E-value=2.3e-19 Score=180.93 Aligned_cols=156 Identities=20% Similarity=0.248 Sum_probs=124.2
Q ss_pred CEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCC
Q 003847 108 QYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNN 187 (791)
Q Consensus 108 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N 187 (791)
+.+++++|.++ .+|..+. ++|+.|+|++|+|++..+..|.++++|+.|+|++|+|++..|..|.++++|++|+|++|
T Consensus 14 ~~v~c~~~~l~-~iP~~l~--~~l~~L~l~~n~i~~i~~~~~~~l~~L~~L~Ls~N~i~~~~~~~~~~l~~L~~L~Ls~N 90 (220)
T 2v9t_B 14 NIVDCRGKGLT-EIPTNLP--ETITEIRLEQNTIKVIPPGAFSPYKKLRRIDLSNNQISELAPDAFQGLRSLNSLVLYGN 90 (220)
T ss_dssp TEEECTTSCCS-SCCSSCC--TTCCEEECCSSCCCEECTTSSTTCTTCCEEECCSSCCCEECTTTTTTCSSCCEEECCSS
T ss_pred CEEEcCCCCcC-cCCCccC--cCCCEEECCCCcCCCcCHhHhhCCCCCCEEECCCCcCCCcCHHHhhCCcCCCEEECCCC
Confidence 46888899888 5666554 68999999999998777778899999999999999999888888888888888888888
Q ss_pred cCCCCCCCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-
Q 003847 188 YFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES- 265 (791)
Q Consensus 188 ~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~- 265 (791)
+|+...+. .+.. .+|++|+|++|+|++..|..+.. +++|++|+|++|+|++..+..
T Consensus 91 ~l~~l~~~---------------------~f~~l~~L~~L~L~~N~l~~~~~~~~~~-l~~L~~L~L~~N~l~~~~~~~~ 148 (220)
T 2v9t_B 91 KITELPKS---------------------LFEGLFSLQLLLLNANKINCLRVDAFQD-LHNLNLLSLYDNKLQTIAKGTF 148 (220)
T ss_dssp CCCCCCTT---------------------TTTTCTTCCEEECCSSCCCCCCTTTTTT-CTTCCEEECCSSCCSCCCTTTT
T ss_pred cCCccCHh---------------------HccCCCCCCEEECCCCCCCEeCHHHcCC-CCCCCEEECCCCcCCEECHHHH
Confidence 87753322 2332 47888888888888555555554 999999999999999888764
Q ss_pred CcccccccccccCCCCCCCCCCC
Q 003847 266 NVFMNQESSSFSGNLDLCGQPTK 288 (791)
Q Consensus 266 ~~~~~~~~~~~~~n~~lc~~~~~ 288 (791)
..+.++..+.+.+|++.|+|.+.
T Consensus 149 ~~l~~L~~L~L~~N~~~c~c~l~ 171 (220)
T 2v9t_B 149 SPLRAIQTMHLAQNPFICDCHLK 171 (220)
T ss_dssp TTCTTCCEEECCSSCEECSGGGH
T ss_pred hCCCCCCEEEeCCCCcCCCCccH
Confidence 44667888999999999987643
No 337
>1h6u_A Internalin H; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.8A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1
Probab=99.78 E-value=6.8e-19 Score=187.14 Aligned_cols=172 Identities=26% Similarity=0.384 Sum_probs=147.0
Q ss_pred CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCC
Q 003847 77 GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQ 156 (791)
Q Consensus 77 ~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 156 (791)
+....+++.|+|++|++.+..+ +..+++|++|+|++|+|++. + .+.++++|++|+|++|+|++ ++. +..+++|+
T Consensus 59 ~~~l~~L~~L~L~~n~i~~~~~--~~~l~~L~~L~L~~n~l~~~-~-~~~~l~~L~~L~l~~n~l~~-~~~-l~~l~~L~ 132 (308)
T 1h6u_A 59 VQYLNNLIGLELKDNQITDLAP--LKNLTKITELELSGNPLKNV-S-AIAGLQSIKTLDLTSTQITD-VTP-LAGLSNLQ 132 (308)
T ss_dssp GGGCTTCCEEECCSSCCCCCGG--GTTCCSCCEEECCSCCCSCC-G-GGTTCTTCCEEECTTSCCCC-CGG-GTTCTTCC
T ss_pred hhccCCCCEEEccCCcCCCChh--HccCCCCCEEEccCCcCCCc-h-hhcCCCCCCEEECCCCCCCC-chh-hcCCCCCC
Confidence 3446799999999999987655 99999999999999999964 4 69999999999999999995 454 99999999
Q ss_pred EEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC-CCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCc
Q 003847 157 LLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP-SKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLS 234 (791)
Q Consensus 157 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~ 234 (791)
+|+|++|++++..+ +..+++|+.|+|++|++++..+ ..+++|+.|+|++|+|++..+ +.. .+|++|+|++|+|+
T Consensus 133 ~L~l~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~l~~n~l~~~~~--l~~l~~L~~L~L~~N~l~ 208 (308)
T 1h6u_A 133 VLYLDLNQITNISP--LAGLTNLQYLSIGNAQVSDLTPLANLSKLTTLKADDNKISDISP--LASLPNLIEVHLKNNQIS 208 (308)
T ss_dssp EEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCCGG--GGGCTTCCEEECTTSCCC
T ss_pred EEECCCCccCcCcc--ccCCCCccEEEccCCcCCCChhhcCCCCCCEEECCCCccCcChh--hcCCCCCCEEEccCCccC
Confidence 99999999996544 8899999999999999998554 345899999999999985443 443 68999999999999
Q ss_pred ccCchhHhhcCCCCcEEEcccCcCccc
Q 003847 235 GEIPPQFGEKIPVNATIDLSFNNLTGE 261 (791)
Q Consensus 235 g~ip~~~~~~l~~l~~l~l~~N~l~~~ 261 (791)
+ ++. +.. +++|+.|+|++|++++.
T Consensus 209 ~-~~~-l~~-l~~L~~L~l~~N~i~~~ 232 (308)
T 1h6u_A 209 D-VSP-LAN-TSNLFIVTLTNQTITNQ 232 (308)
T ss_dssp B-CGG-GTT-CTTCCEEEEEEEEEECC
T ss_pred c-ccc-ccC-CCCCCEEEccCCeeecC
Confidence 4 443 544 99999999999999863
No 338
>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*
Probab=99.78 E-value=2.3e-19 Score=185.61 Aligned_cols=134 Identities=16% Similarity=0.176 Sum_probs=105.0
Q ss_pred ceeccccCceEEEEEEe-CCCcE--EEEEEcCCCchh------------------------hHHHHHHHHHHHhccCCCC
Q 003847 480 AYILGASGSSIMYKAVL-EDGTA--LAVRRIGENSVD------------------------RFRDFETQVRVIAKLVHPN 532 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~-~~g~~--vavK~~~~~~~~------------------------~~~~~~~E~~~l~~l~H~n 532 (791)
...||+|+||.||+|.. .+|+. ||||+++..... ....+.+|+++++++.|++
T Consensus 52 ~~~ig~G~~g~Vy~a~~~~~g~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 131 (258)
T 1zth_A 52 GGVISTGKEANVFYADGVFDGKPVAMAVKIYRIETSEFDKMDEYLYGDERFDMRRISPKEKVFIWTEKEFRNLERAKEAG 131 (258)
T ss_dssp EEEEEECSSEEEEEEEEEETTEEEEEEEEEECCC-------GGGTTTCTTSCC----CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CCEEeecceEEEEEEEEcCCCcEeeEEEEEEECCccchhhHHHhhcccchhhhhccChHHHHHHHHHHHHHHHHHHHhCC
Confidence 46899999999999997 78999 999987543111 1136889999999998886
Q ss_pred c--cceeeEEEccCceEEEEeccCC-C----ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHh-cCCCeecCCCC
Q 003847 533 L--VRIRGFYWGVDEKLIIYDFVPN-G----SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLH-EKKHVHGNLKP 604 (791)
Q Consensus 533 I--v~l~~~~~~~~~~~lv~e~~~~-g----sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH-~~~ivHrDlkp 604 (791)
+ +.++++ +..++||||+.+ | +|.++... .++..+..++.|++.||+||| +.||+||||||
T Consensus 132 i~~p~~~~~----~~~~lVmE~~g~~g~~~~~L~~~~~~--------~~~~~~~~i~~qi~~~l~~lH~~~givHrDlkp 199 (258)
T 1zth_A 132 VSVPQPYTY----MKNVLLMEFIGEDELPAPTLVELGRE--------LKELDVEGIFNDVVENVKRLYQEAELVHADLSE 199 (258)
T ss_dssp CCCCCEEEE----ETTEEEEECCEETTEECCBHHHHGGG--------GGGSCHHHHHHHHHHHHHHHHHTSCEECSSCST
T ss_pred CCCCeEEEc----CCCEEEEEecCCCCCccccHHHHhhc--------cChHHHHHHHHHHHHHHHHHHHHCCEEeCCCCH
Confidence 4 344432 367899999942 4 66554322 234467889999999999999 99999999999
Q ss_pred CCeEecCCCCeEEeccCcccccC
Q 003847 605 RNVLLGNDMEPKIGDFGLERLVT 627 (791)
Q Consensus 605 ~NILl~~~~~~kL~DFGla~~~~ 627 (791)
+|||++. .++|+|||+|....
T Consensus 200 ~NILl~~--~~~liDFG~a~~~~ 220 (258)
T 1zth_A 200 YNIMYID--KVYFIDMGQAVTLR 220 (258)
T ss_dssp TSEEESS--SEEECCCTTCEETT
T ss_pred HHEEEcC--cEEEEECcccccCC
Confidence 9999988 99999999998754
No 339
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.78 E-value=1.2e-18 Score=188.60 Aligned_cols=192 Identities=23% Similarity=0.326 Sum_probs=102.6
Q ss_pred CCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCc------------
Q 003847 79 NDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLP------------ 146 (791)
Q Consensus 79 ~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p------------ 146 (791)
...+++.|+|++|.....++. +..+++|++|++++|.+.+..+ +.++++|++|+|++|.+++..+
T Consensus 130 ~l~~L~~L~l~~n~~~~~~~~-~~~l~~L~~L~l~~~~~~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l 206 (347)
T 4fmz_A 130 NLTKMYSLNLGANHNLSDLSP-LSNMTGLNYLTVTESKVKDVTP--IANLTDLYSLSLNYNQIEDISPLASLTSLHYFTA 206 (347)
T ss_dssp TCTTCCEEECTTCTTCCCCGG-GTTCTTCCEEECCSSCCCCCGG--GGGCTTCSEEECTTSCCCCCGGGGGCTTCCEEEC
T ss_pred cCCceeEEECCCCCCcccccc-hhhCCCCcEEEecCCCcCCchh--hccCCCCCEEEccCCcccccccccCCCccceeec
Confidence 345556666666644433332 5555555555555555543322 4445555555555555542211
Q ss_pred ---------cccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCC-CCCCcccceeccccccccccCCC
Q 003847 147 ---------ETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGL-PSKFNSVQVLDLSSNLINGSLPP 216 (791)
Q Consensus 147 ---------~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~L~~L~ls~N~l~~~~p~ 216 (791)
. +..+++|+.|+|++|++++..+ +..+++|++|+|++|.+++.. ...+++|+.|+|++|++++. +
T Consensus 207 ~~n~l~~~~~-~~~~~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~-~- 281 (347)
T 4fmz_A 207 YVNQITDITP-VANMTRLNSLKIGNNKITDLSP--LANLSQLTWLEIGTNQISDINAVKDLTKLKMLNVGSNQISDI-S- 281 (347)
T ss_dssp CSSCCCCCGG-GGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCCCGGGTTCTTCCEEECCSSCCCCC-G-
T ss_pred ccCCCCCCch-hhcCCcCCEEEccCCccCCCcc--hhcCCCCCEEECCCCccCCChhHhcCCCcCEEEccCCccCCC-h-
Confidence 1 5555666666666666653322 556666666666666665531 12335666666666666632 2
Q ss_pred CcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCC
Q 003847 217 DIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNL 280 (791)
Q Consensus 217 ~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 280 (791)
.+.. .+|++|+|++|++++..|..+.. +++|+.|+|++|++++..| ...+.++..+.+.+|+
T Consensus 282 ~~~~l~~L~~L~L~~n~l~~~~~~~l~~-l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~N~ 344 (347)
T 4fmz_A 282 VLNNLSQLNSLFLNNNQLGNEDMEVIGG-LTNLTTLFLSQNHITDIRP-LASLSKMDSADFANQV 344 (347)
T ss_dssp GGGGCTTCSEEECCSSCCCGGGHHHHHT-CTTCSEEECCSSSCCCCGG-GGGCTTCSEESSSCC-
T ss_pred hhcCCCCCCEEECcCCcCCCcChhHhhc-cccCCEEEccCCccccccC-hhhhhccceeehhhhc
Confidence 2222 46666666666666555555544 6666666666666666555 3344455555555553
No 340
>4g8a_A TOLL-like receptor 4; leucine rich repeat MD-2 related lipid recognition, receptor immunity, lipid binding, glycosylation, immune system; HET: NAG LP4 LP5 DAO MYR KDO; 2.40A {Homo sapiens} PDB: 3fxi_A*
Probab=99.78 E-value=4.9e-19 Score=207.58 Aligned_cols=218 Identities=24% Similarity=0.255 Sum_probs=162.9
Q ss_pred CCCCccCCCCCCCCCCceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccC
Q 003847 48 DPLGVLGSWNYNDENPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFN 127 (791)
Q Consensus 48 ~~~~~l~sw~~~~~~~c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 127 (791)
|+...+++|+. .-|..|..-.|..+ . +..+=++.+|+ .+|..+. +++++|||++|+|++..+..|.+
T Consensus 8 ~~~~~~~~~~~--~~p~~~~~c~~~~~-------~-~~~~c~~~~l~-~vP~~lp--~~~~~LdLs~N~i~~l~~~~f~~ 74 (635)
T 4g8a_A 8 DDDDKLAAANS--SIPESWEPCVEVVP-------N-ITYQCMELNFY-KIPDNLP--FSTKNLDLSFNPLRHLGSYSFFS 74 (635)
T ss_dssp -------------------CCSEEEET-------T-TEEECTTSCCS-SCCSSSC--TTCCEEECTTSCCCEECTTTTTT
T ss_pred CCcchhhcccC--CCCCCCCCccccCC-------C-CEEECCCCCcC-ccCCCCC--cCCCEEEeeCCCCCCCCHHHHhC
Confidence 33446777763 45778887666522 1 23466677777 5666553 57999999999999888889999
Q ss_pred CCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceec
Q 003847 128 ASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLD 204 (791)
Q Consensus 128 l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ 204 (791)
+++|++|+|++|+|++..|..|.+|++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..| ++|++|+
T Consensus 75 l~~L~~L~Ls~N~i~~i~~~~f~~L~~L~~L~Ls~N~l~~l~~~~f~~L~~L~~L~Ls~N~l~~l~~~~~~~L~~L~~L~ 154 (635)
T 4g8a_A 75 FPELQVLDLSRCEIQTIEDGAYQSLSHLSTLILTGNPIQSLALGAFSGLSSLQKLVAVETNLASLENFPIGHLKTLKELN 154 (635)
T ss_dssp CTTCCEEECTTCCCCEECTTTTTTCTTCCEEECTTCCCCEECGGGGTTCTTCCEEECTTSCCCCSTTCCCTTCTTCCEEE
T ss_pred CCCCCEEECCCCcCCCcChhHhcCCCCCCEEEccCCcCCCCCHHHhcCCCCCCEEECCCCcCCCCChhhhhcCcccCeec
Confidence 9999999999999998888899999999999999999998888899999999999999999998766544 7899999
Q ss_pred cccccccc-cCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCC----CcEEEcccCcCcccCCCCCcccccccccccC
Q 003847 205 LSSNLING-SLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPV----NATIDLSFNNLTGEIPESNVFMNQESSSFSG 278 (791)
Q Consensus 205 ls~N~l~~-~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~----l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~ 278 (791)
|++|+|++ .+|..+.. .+|++|+|++|+|++..|..+.. +.+ +..++++.|+++...+..........+.+.+
T Consensus 155 Ls~N~l~~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~l~~-L~~l~~~~~~~~ls~n~l~~i~~~~~~~~~~~~l~l~~ 233 (635)
T 4g8a_A 155 VAHNLIQSFKLPEYFSNLTNLEHLDLSSNKIQSIYCTDLRV-LHQMPLLNLSLDLSLNPMNFIQPGAFKEIRLHKLTLRN 233 (635)
T ss_dssp CCSSCCCCCCCCGGGGGCTTCCEEECCSSCCCEECGGGGHH-HHTCTTCCCEEECTTCCCCEECTTTTTTCEEEEEEEES
T ss_pred cccCccccCCCchhhccchhhhhhcccCccccccccccccc-hhhhhhhhhhhhcccCcccccCcccccchhhhhhhhhc
Confidence 99999975 45666665 58999999999999777766543 433 4579999999998777665555545555555
Q ss_pred C
Q 003847 279 N 279 (791)
Q Consensus 279 n 279 (791)
|
T Consensus 234 n 234 (635)
T 4g8a_A 234 N 234 (635)
T ss_dssp C
T ss_pred c
Confidence 5
No 341
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.77 E-value=1.6e-18 Score=182.70 Aligned_cols=168 Identities=23% Similarity=0.286 Sum_probs=144.4
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|++++|++... +.+..+++|++|+|++|+|++..+ +.++++|++|+|++|+|++ +| .+.++++|++|+
T Consensus 45 l~~L~~L~l~~~~i~~~--~~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n~l~~-~~-~l~~l~~L~~L~ 118 (291)
T 1h6t_A 45 LNSIDQIIANNSDIKSV--QGIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDENKVKD-LS-SLKDLKKLKSLS 118 (291)
T ss_dssp HHTCCEEECTTSCCCCC--TTGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-GG-GGTTCTTCCEEE
T ss_pred cCcccEEEccCCCcccC--hhHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCCcCCC-Ch-hhccCCCCCEEE
Confidence 46789999999999865 358999999999999999997655 9999999999999999985 44 499999999999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCC-CCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccC
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGL-PSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEI 237 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~i 237 (791)
|++|++++. ..+..+++|+.|+|++|++++.. ...+++|+.|+|++|+|++..+ +.. .+|++|+|++|+|+ .+
T Consensus 119 L~~n~i~~~--~~l~~l~~L~~L~l~~n~l~~~~~l~~l~~L~~L~L~~N~l~~~~~--l~~l~~L~~L~L~~N~i~-~l 193 (291)
T 1h6t_A 119 LEHNGISDI--NGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHIS-DL 193 (291)
T ss_dssp CTTSCCCCC--GGGGGCTTCCEEECCSSCCCCCGGGGGCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCC-BC
T ss_pred CCCCcCCCC--hhhcCCCCCCEEEccCCcCCcchhhccCCCCCEEEccCCccccchh--hcCCCccCEEECCCCcCC-CC
Confidence 999999964 46889999999999999999852 1234899999999999996555 544 68999999999999 56
Q ss_pred chhHhhcCCCCcEEEcccCcCcc
Q 003847 238 PPQFGEKIPVNATIDLSFNNLTG 260 (791)
Q Consensus 238 p~~~~~~l~~l~~l~l~~N~l~~ 260 (791)
|. +.. +++|+.|+|++|+++.
T Consensus 194 ~~-l~~-l~~L~~L~l~~n~i~~ 214 (291)
T 1h6t_A 194 RA-LAG-LKNLDVLELFSQECLN 214 (291)
T ss_dssp GG-GTT-CTTCSEEEEEEEEEEC
T ss_pred hh-hcc-CCCCCEEECcCCcccC
Confidence 64 544 9999999999999975
No 342
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.76 E-value=1.1e-17 Score=187.62 Aligned_cols=182 Identities=21% Similarity=0.154 Sum_probs=109.4
Q ss_pred CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCC
Q 003847 77 GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQ 156 (791)
Q Consensus 77 ~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 156 (791)
+....+++.|+|++|++++. | ++.+++|++|+|++|+|++. + +.++++|++|+|++|+|++ +| ++++++|+
T Consensus 60 l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~L~~N~l~~-l~--~~~l~~L~ 130 (457)
T 3bz5_A 60 IEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLNCDTNKLTK-LD--VSQNPLLT 130 (457)
T ss_dssp GGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEECCSSCCSC-CC--CTTCTTCC
T ss_pred hcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEECCCCcCCe-ec--CCCCCcCC
Confidence 44567778888888888764 3 77788888888888888764 3 7777888888888888875 44 77777888
Q ss_pred EEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCC-CCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCc
Q 003847 157 LLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGL-PSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLS 234 (791)
Q Consensus 157 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~ 234 (791)
+|+|++|+|++. + +..+++|++|+|++|+..+.+ ...+++|+.|+|++|+|++ +| +.. .+|++|++++|+|+
T Consensus 131 ~L~l~~N~l~~l-~--l~~l~~L~~L~l~~n~~~~~~~~~~l~~L~~L~ls~n~l~~-l~--l~~l~~L~~L~l~~N~l~ 204 (457)
T 3bz5_A 131 YLNCARNTLTEI-D--VSHNTQLTELDCHLNKKITKLDVTPQTQLTTLDCSFNKITE-LD--VSQNKLLNRLNCDTNNIT 204 (457)
T ss_dssp EEECTTSCCSCC-C--CTTCTTCCEEECTTCSCCCCCCCTTCTTCCEEECCSSCCCC-CC--CTTCTTCCEEECCSSCCS
T ss_pred EEECCCCcccee-c--cccCCcCCEEECCCCCcccccccccCCcCCEEECCCCccce-ec--cccCCCCCEEECcCCcCC
Confidence 888888877753 2 556666666666666433332 2233556666666666654 33 222 34555555555555
Q ss_pred ccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCC
Q 003847 235 GEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGN 279 (791)
Q Consensus 235 g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n 279 (791)
+ ++ +.. +++|++|+|++|++++ +| ...+.++..+.+.+|
T Consensus 205 ~-~~--l~~-l~~L~~L~Ls~N~l~~-ip-~~~l~~L~~L~l~~N 243 (457)
T 3bz5_A 205 K-LD--LNQ-NIQLTFLDCSSNKLTE-ID-VTPLTQLTYFDCSVN 243 (457)
T ss_dssp C-CC--CTT-CTTCSEEECCSSCCSC-CC-CTTCTTCSEEECCSS
T ss_pred e-ec--ccc-CCCCCEEECcCCcccc-cC-ccccCCCCEEEeeCC
Confidence 3 22 222 5555555555555554 33 223333444444443
No 343
>3bz5_A Internalin-J, INLJ; leucine rich repeat (LRR), cysteine ladder, asparagine ladder, virulence factor, solenoid, cell WALL; 2.70A {Listeria monocytogenes}
Probab=99.76 E-value=9.5e-18 Score=188.19 Aligned_cols=182 Identities=19% Similarity=0.172 Sum_probs=155.6
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|+|++|++++. | .|+.+++|++|+|++|+|++. | +.++++|++|+|++|+|++. + ++++++|++|+
T Consensus 41 l~~L~~L~Ls~n~l~~~-~-~l~~l~~L~~L~Ls~n~l~~~-~--~~~l~~L~~L~Ls~N~l~~~-~--~~~l~~L~~L~ 112 (457)
T 3bz5_A 41 LATLTSLDCHNSSITDM-T-GIEKLTGLTKLICTSNNITTL-D--LSQNTNLTYLACDSNKLTNL-D--VTPLTKLTYLN 112 (457)
T ss_dssp HTTCCEEECCSSCCCCC-T-TGGGCTTCSEEECCSSCCSCC-C--CTTCTTCSEEECCSSCCSCC-C--CTTCTTCCEEE
T ss_pred cCCCCEEEccCCCcccC-h-hhcccCCCCEEEccCCcCCeE-c--cccCCCCCEEECcCCCCcee-e--cCCCCcCCEEE
Confidence 57899999999999975 4 799999999999999999975 4 89999999999999999974 4 99999999999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCc
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIP 238 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip 238 (791)
|++|++++ +| +..+++|++|+|++|+|++.....+++|++|++++|+..+.++ +.. .+|++|++++|+|++ +|
T Consensus 113 L~~N~l~~-l~--~~~l~~L~~L~l~~N~l~~l~l~~l~~L~~L~l~~n~~~~~~~--~~~l~~L~~L~ls~n~l~~-l~ 186 (457)
T 3bz5_A 113 CDTNKLTK-LD--VSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLD--VTPQTQLTTLDCSFNKITE-LD 186 (457)
T ss_dssp CCSSCCSC-CC--CTTCTTCCEEECTTSCCSCCCCTTCTTCCEEECTTCSCCCCCC--CTTCTTCCEEECCSSCCCC-CC
T ss_pred CCCCcCCe-ec--CCCCCcCCEEECCCCccceeccccCCcCCEEECCCCCcccccc--cccCCcCCEEECCCCccce-ec
Confidence 99999996 44 8999999999999999999755667999999999997666663 444 589999999999995 77
Q ss_pred hhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCC
Q 003847 239 PQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNL 280 (791)
Q Consensus 239 ~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 280 (791)
+.. +++|+.|++++|++++. +...+.++..+.+.+|.
T Consensus 187 --l~~-l~~L~~L~l~~N~l~~~--~l~~l~~L~~L~Ls~N~ 223 (457)
T 3bz5_A 187 --VSQ-NKLLNRLNCDTNNITKL--DLNQNIQLTFLDCSSNK 223 (457)
T ss_dssp --CTT-CTTCCEEECCSSCCSCC--CCTTCTTCSEEECCSSC
T ss_pred --ccc-CCCCCEEECcCCcCCee--ccccCCCCCEEECcCCc
Confidence 444 99999999999999986 24445566666666664
No 344
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.76 E-value=2.7e-18 Score=193.67 Aligned_cols=189 Identities=24% Similarity=0.289 Sum_probs=102.5
Q ss_pred CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCC
Q 003847 77 GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQ 156 (791)
Q Consensus 77 ~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 156 (791)
+....+++.|+|++|.+.+. +.+..+++|++|+|++|.+++..| +..+++|+.|+|++|++++ + ..+..+++|+
T Consensus 173 ~~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~-~-~~l~~l~~L~ 246 (466)
T 1o6v_A 173 LANLTTLERLDISSNKVSDI--SVLAKLTNLESLIATNNQISDITP--LGILTNLDELSLNGNQLKD-I-GTLASLTNLT 246 (466)
T ss_dssp GTTCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGG--GGGCTTCCEEECCSSCCCC-C-GGGGGCTTCS
T ss_pred hccCCCCCEEECcCCcCCCC--hhhccCCCCCEEEecCCccccccc--ccccCCCCEEECCCCCccc-c-hhhhcCCCCC
Confidence 34456677777777776543 236666677777777776665544 5556666666666666653 2 2355566666
Q ss_pred EEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC-CCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCc
Q 003847 157 LLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP-SKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLS 234 (791)
Q Consensus 157 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~ 234 (791)
.|+|++|.+++..+ +..+++|+.|+|++|++++..+ ..+++|+.|+|++|++++..+ +.. .+|++|+|++|+++
T Consensus 247 ~L~l~~n~l~~~~~--~~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~L~~n~l~~~~~--~~~l~~L~~L~L~~n~l~ 322 (466)
T 1o6v_A 247 DLDLANNQISNLAP--LSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP--ISNLKNLTYLTLYFNNIS 322 (466)
T ss_dssp EEECCSSCCCCCGG--GTTCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCSCCGG--GGGCTTCSEEECCSSCCS
T ss_pred EEECCCCccccchh--hhcCCCCCEEECCCCccCccccccCCCccCeEEcCCCcccCchh--hcCCCCCCEEECcCCcCC
Confidence 66666666654433 5556666666666666655332 223555566666665554322 222 35555555555555
Q ss_pred ccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCC
Q 003847 235 GEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGN 279 (791)
Q Consensus 235 g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n 279 (791)
+..| +. .+++|+.|++++|++++. +....+.++..+.+.+|
T Consensus 323 ~~~~--~~-~l~~L~~L~l~~n~l~~~-~~l~~l~~L~~L~l~~n 363 (466)
T 1o6v_A 323 DISP--VS-SLTKLQRLFFYNNKVSDV-SSLANLTNINWLSAGHN 363 (466)
T ss_dssp CCGG--GG-GCTTCCEEECCSSCCCCC-GGGTTCTTCCEEECCSS
T ss_pred Cchh--hc-cCccCCEeECCCCccCCc-hhhccCCCCCEEeCCCC
Confidence 4333 22 255555555555555543 22223334444444444
No 345
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.76 E-value=1.3e-18 Score=171.38 Aligned_cols=124 Identities=27% Similarity=0.328 Sum_probs=94.6
Q ss_pred EEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcc-cccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCC
Q 003847 85 GLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSF-SLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDN 163 (791)
Q Consensus 85 ~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 163 (791)
.|++++|+|. .+|..+.. +|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|++|
T Consensus 12 ~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N 88 (192)
T 1w8a_A 12 TVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGEN 88 (192)
T ss_dssp EEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCSC
T ss_pred EEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCCC
Confidence 4455567774 56665543 889999999999866654 4888999999999999999888888999999999999999
Q ss_pred cCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceecccccccc
Q 003847 164 ALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLIN 211 (791)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~ 211 (791)
+|++..+..|.++++|++|+|++|+|++.+|..| ++|++|+|++|.++
T Consensus 89 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 139 (192)
T 1w8a_A 89 KIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFN 139 (192)
T ss_dssp CCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBC
T ss_pred cCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCcc
Confidence 9998888888888888888888888887655544 33444444444443
No 346
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.75 E-value=1.4e-18 Score=194.80 Aligned_cols=149 Identities=26% Similarity=0.301 Sum_probs=67.5
Q ss_pred CCCCCCcEEEEEcCCCCCccCCCcCCCCCCCC-------------CEEeCcCCCCCCCCcccccCCCCccEEEccCCcCC
Q 003847 76 EGNNDSRVIGLALPNSQLLGSIPADLGMIEFL-------------QYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLIS 142 (791)
Q Consensus 76 ~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L-------------~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 142 (791)
.+....+++.|+|++|++.|.+|..++++.+| ++|+|++|.+++ +|.. .++|++|+|++|+++
T Consensus 29 ~i~~L~~L~~L~l~~n~~~~~~p~~~~~l~~L~~l~l~~c~~~~l~~L~l~~~~l~~-lp~~---~~~L~~L~l~~n~l~ 104 (454)
T 1jl5_A 29 EAENVKSKTEYYNAWSEWERNAPPGNGEQREMAVSRLRDCLDRQAHELELNNLGLSS-LPEL---PPHLESLVASCNSLT 104 (454)
T ss_dssp -----CCHHHHHHHHHHHHHTSCTTSCCCHHHHHHHHHHHHHHTCSEEECTTSCCSC-CCSC---CTTCSEEECCSSCCS
T ss_pred hHhcccchhhhhccCCcccccCCcccccchhcchhhhhhhhccCCCEEEecCCcccc-CCCC---cCCCCEEEccCCcCC
Confidence 34445555666666666666666666655543 555555555543 2221 134555555555555
Q ss_pred CCCccccC----------------CC-CCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceecc
Q 003847 143 GHLPETMG----------------SL-HNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDL 205 (791)
Q Consensus 143 ~~~p~~~~----------------~l-~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~l 205 (791)
+ +|..+. .+ ++|++|+|++|++++ +| .|.++++|++|+|++|++++ +|..+.+|++|+|
T Consensus 105 ~-lp~~~~~L~~L~l~~n~l~~l~~~~~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~~~L~~L~L 180 (454)
T 1jl5_A 105 E-LPELPQSLKSLLVDNNNLKALSDLPPLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLPPSLEFIAA 180 (454)
T ss_dssp S-CCCCCTTCCEEECCSSCCSCCCSCCTTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCCTTCCEEEC
T ss_pred c-cccccCCCcEEECCCCccCcccCCCCCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCcccccEEEC
Confidence 4 443221 01 244444444444443 33 34444444555554444443 3333444444444
Q ss_pred ccccccccCCCCcCC-ccccEEEccCCcCc
Q 003847 206 SSNLINGSLPPDIGG-YSLRYLNLSYNRLS 234 (791)
Q Consensus 206 s~N~l~~~~p~~~~~-~~L~~L~l~~N~l~ 234 (791)
++|++++ +| .+.. .+|++|++++|+++
T Consensus 181 ~~n~l~~-l~-~~~~l~~L~~L~l~~N~l~ 208 (454)
T 1jl5_A 181 GNNQLEE-LP-ELQNLPFLTAIYADNNSLK 208 (454)
T ss_dssp CSSCCSS-CC-CCTTCTTCCEEECCSSCCS
T ss_pred cCCcCCc-Cc-cccCCCCCCEEECCCCcCC
Confidence 4444443 33 2222 34444444444444
No 347
>1w8a_A SLIT protein; signaling protein, secreted protein, AXON guidance, leucine-rich repeat glycoprotein, EGF-like domain, signal protein; 2.8A {Drosophila melanogaster} SCOP: c.10.2.7
Probab=99.74 E-value=8.9e-18 Score=165.40 Aligned_cols=131 Identities=21% Similarity=0.270 Sum_probs=109.4
Q ss_pred CEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCcc-ccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCC
Q 003847 108 QYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPE-TMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKN 186 (791)
Q Consensus 108 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~-~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~ 186 (791)
+.|++++|+|+ .+|..+.. +|++|+|++|+|++..+. .|.++++|++|+|++|+|++..|..|.++++|++|+|++
T Consensus 11 ~~l~~s~~~l~-~ip~~~~~--~l~~L~l~~n~i~~~~~~~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~ 87 (192)
T 1w8a_A 11 TTVDCTGRGLK-EIPRDIPL--HTTELLLNDNELGRISSDGLFGRLPHLVKLELKRNQLTGIEPNAFEGASHIQELQLGE 87 (192)
T ss_dssp TEEECTTSCCS-SCCSCCCT--TCSEEECCSCCCCSBCCSCSGGGCTTCCEEECCSSCCCCBCTTTTTTCTTCCEEECCS
T ss_pred CEEEcCCCCcC-cCccCCCC--CCCEEECCCCcCCccCCccccccCCCCCEEECCCCCCCCcCHhHcCCcccCCEEECCC
Confidence 78999999997 67776654 899999999999976665 489999999999999999998899999999999999999
Q ss_pred CcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhH
Q 003847 187 NYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQF 241 (791)
Q Consensus 187 N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~ 241 (791)
|+|++..+..| ++|++|+|++|+|++.+|..+.. .+|++|+|++|.+++..+...
T Consensus 88 N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~c~c~l~~ 146 (192)
T 1w8a_A 88 NKIKEISNKMFLGLHQLKTLNLYDNQISCVMPGSFEHLNSLTSLNLASNPFNCNCHLAW 146 (192)
T ss_dssp CCCCEECSSSSTTCTTCCEEECCSSCCCEECTTSSTTCTTCCEEECTTCCBCCSGGGHH
T ss_pred CcCCccCHHHhcCCCCCCEEECCCCcCCeeCHHHhhcCCCCCEEEeCCCCccCcCcchH
Confidence 99998777654 67888888888888777777765 478888888888877666443
No 348
>1o6v_A Internalin A; bacterial infection, extracellular recognition, cell WALL attached, leucine rich repeat; 1.5A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 1o6s_A* 1o6t_A 2omz_A 2omy_A 2omw_A 2omv_A 2omt_A 2omx_A 2omu_A
Probab=99.74 E-value=1.7e-17 Score=187.16 Aligned_cols=190 Identities=28% Similarity=0.349 Sum_probs=135.7
Q ss_pred CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCC
Q 003847 77 GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQ 156 (791)
Q Consensus 77 ~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 156 (791)
+....+++.|++. |++.+.. .+..+++|+.|+|++|.+++. + .+.++++|++|+|++|.+++..| ++.+++|+
T Consensus 152 ~~~l~~L~~L~l~-~~~~~~~--~~~~l~~L~~L~l~~n~l~~~-~-~l~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~ 224 (466)
T 1o6v_A 152 LSGLTSLQQLSFG-NQVTDLK--PLANLTTLERLDISSNKVSDI-S-VLAKLTNLESLIATNNQISDITP--LGILTNLD 224 (466)
T ss_dssp GTTCTTCSEEEEE-ESCCCCG--GGTTCTTCCEEECCSSCCCCC-G-GGGGCTTCSEEECCSSCCCCCGG--GGGCTTCC
T ss_pred hccCCcccEeecC-CcccCch--hhccCCCCCEEECcCCcCCCC-h-hhccCCCCCEEEecCCccccccc--ccccCCCC
Confidence 4456677777775 4554432 378888888888888888753 2 47788888888888888886555 67788888
Q ss_pred EEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC-CCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCc
Q 003847 157 LLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP-SKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLS 234 (791)
Q Consensus 157 ~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~ 234 (791)
.|+|++|++++. ..+..+++|+.|+|++|++++..+ ..+++|+.|+|++|++++..+ +.. .+|++|+|++|+++
T Consensus 225 ~L~l~~n~l~~~--~~l~~l~~L~~L~l~~n~l~~~~~~~~l~~L~~L~l~~n~l~~~~~--~~~l~~L~~L~L~~n~l~ 300 (466)
T 1o6v_A 225 ELSLNGNQLKDI--GTLASLTNLTDLDLANNQISNLAPLSGLTKLTELKLGANQISNISP--LAGLTALTNLELNENQLE 300 (466)
T ss_dssp EEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCCCGGGTTCTTCSEEECCSSCCCCCGG--GTTCTTCSEEECCSSCCS
T ss_pred EEECCCCCcccc--hhhhcCCCCCEEECCCCccccchhhhcCCCCCEEECCCCccCcccc--ccCCCccCeEEcCCCccc
Confidence 888888888743 357778888888888888887554 334778888888888875443 333 57888888888888
Q ss_pred ccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCC
Q 003847 235 GEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLD 281 (791)
Q Consensus 235 g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 281 (791)
+. +. +.. +++|+.|+|++|++++..| ...+.++..+.+.+|..
T Consensus 301 ~~-~~-~~~-l~~L~~L~L~~n~l~~~~~-~~~l~~L~~L~l~~n~l 343 (466)
T 1o6v_A 301 DI-SP-ISN-LKNLTYLTLYFNNISDISP-VSSLTKLQRLFFYNNKV 343 (466)
T ss_dssp CC-GG-GGG-CTTCSEEECCSSCCSCCGG-GGGCTTCCEEECCSSCC
T ss_pred Cc-hh-hcC-CCCCCEEECcCCcCCCchh-hccCccCCEeECCCCcc
Confidence 43 33 443 8888888888888887666 34555666666766643
No 349
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.73 E-value=4.9e-18 Score=168.06 Aligned_cols=150 Identities=15% Similarity=0.232 Sum_probs=78.8
Q ss_pred cEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCc
Q 003847 82 RVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLS 161 (791)
Q Consensus 82 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 161 (791)
+++.|+|++|++. .+| .+..+++|++|+|++|.++. +..+.++++|++|+|++|++++..+..|+.+++|++|+|+
T Consensus 45 ~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~l~~n~~~~--~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls 120 (197)
T 4ezg_A 45 SLTYITLANINVT-DLT-GIEYAHNIKDLTINNIHATN--YNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDIS 120 (197)
T ss_dssp TCCEEEEESSCCS-CCT-TGGGCTTCSEEEEESCCCSC--CGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECC
T ss_pred CccEEeccCCCcc-ChH-HHhcCCCCCEEEccCCCCCc--chhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEec
Confidence 4455555555554 233 35555555555555554431 1244555555555555555554444555555555555555
Q ss_pred CCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchh
Q 003847 162 DNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQ 240 (791)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~ 240 (791)
+|++++..|..+..+++|++|+|++|++ ++ .+| .+.. .+|++|+|++|+++ .++ .
T Consensus 121 ~n~i~~~~~~~l~~l~~L~~L~L~~n~~--------------------i~-~~~-~l~~l~~L~~L~l~~n~i~-~~~-~ 176 (197)
T 4ezg_A 121 HSAHDDSILTKINTLPKVNSIDLSYNGA--------------------IT-DIM-PLKTLPELKSLNIQFDGVH-DYR-G 176 (197)
T ss_dssp SSBCBGGGHHHHTTCSSCCEEECCSCTB--------------------CC-CCG-GGGGCSSCCEEECTTBCCC-CCT-T
T ss_pred CCccCcHhHHHHhhCCCCCEEEccCCCC--------------------cc-ccH-hhcCCCCCCEEECCCCCCc-ChH-H
Confidence 5555544445555555555555555541 22 333 2322 46777777777777 454 4
Q ss_pred HhhcCCCCcEEEcccCcCcc
Q 003847 241 FGEKIPVNATIDLSFNNLTG 260 (791)
Q Consensus 241 ~~~~l~~l~~l~l~~N~l~~ 260 (791)
+.. +++|+.|++++|++.+
T Consensus 177 l~~-l~~L~~L~l~~N~i~~ 195 (197)
T 4ezg_A 177 IED-FPKLNQLYAFSQTIGG 195 (197)
T ss_dssp GGG-CSSCCEEEECBC----
T ss_pred hcc-CCCCCEEEeeCcccCC
Confidence 444 8888888888888753
No 350
>1jl5_A Outer protein YOPM; leucine-rich repeat, molecular pathogenesis, effector protein, virulence factor, toxin; 2.10A {Yersinia pestis} SCOP: c.10.2.6 PDB: 1g9u_A
Probab=99.73 E-value=6.9e-17 Score=180.99 Aligned_cols=140 Identities=30% Similarity=0.430 Sum_probs=70.7
Q ss_pred CCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeC
Q 003847 105 EFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSL 184 (791)
Q Consensus 105 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L 184 (791)
++|++|+|++|+|++ +| .|.++++|++|+|++|+|++ +|..+ .+|++|+|++|++++ +| .+.++++|+.|++
T Consensus 131 ~~L~~L~L~~n~l~~-lp-~~~~l~~L~~L~l~~N~l~~-lp~~~---~~L~~L~L~~n~l~~-l~-~~~~l~~L~~L~l 202 (454)
T 1jl5_A 131 PLLEYLGVSNNQLEK-LP-ELQNSSFLKIIDVDNNSLKK-LPDLP---PSLEFIAAGNNQLEE-LP-ELQNLPFLTAIYA 202 (454)
T ss_dssp TTCCEEECCSSCCSS-CC-CCTTCTTCCEEECCSSCCSC-CCCCC---TTCCEEECCSSCCSS-CC-CCTTCTTCCEEEC
T ss_pred CCCCEEECcCCCCCC-Cc-ccCCCCCCCEEECCCCcCcc-cCCCc---ccccEEECcCCcCCc-Cc-cccCCCCCCEEEC
Confidence 345555555555553 44 35555555555555555553 33322 245555555555553 33 3555555555555
Q ss_pred CCCcCCCCCCCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcc
Q 003847 185 KNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTG 260 (791)
Q Consensus 185 ~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~ 260 (791)
++|++++ +|...++|++|+|++|+++ .+|. +.. .+|++|++++|+++ .+|.. +++|+.|++++|++++
T Consensus 203 ~~N~l~~-l~~~~~~L~~L~l~~n~l~-~lp~-~~~l~~L~~L~l~~N~l~-~l~~~----~~~L~~L~l~~N~l~~ 271 (454)
T 1jl5_A 203 DNNSLKK-LPDLPLSLESIVAGNNILE-ELPE-LQNLPFLTTIYADNNLLK-TLPDL----PPSLEALNVRDNYLTD 271 (454)
T ss_dssp CSSCCSS-CCCCCTTCCEEECCSSCCS-SCCC-CTTCTTCCEEECCSSCCS-SCCSC----CTTCCEEECCSSCCSC
T ss_pred CCCcCCc-CCCCcCcccEEECcCCcCC-cccc-cCCCCCCCEEECCCCcCC-ccccc----ccccCEEECCCCcccc
Confidence 5555554 3433445555555555555 4443 333 35555555555555 24431 3455555555555554
No 351
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.73 E-value=1.3e-17 Score=192.63 Aligned_cols=170 Identities=24% Similarity=0.286 Sum_probs=146.1
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
+.+|+.|+|++|++... + .|..|++|+.|+|++|+|++..| +.++++|+.|+|++|+|++ +| .+..|++|+.|+
T Consensus 42 L~~L~~L~l~~n~i~~l-~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~l~~-l~-~l~~l~~L~~L~ 115 (605)
T 1m9s_A 42 LNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLDENKIKD-LS-SLKDLKKLKSLS 115 (605)
T ss_dssp HTTCCCCBCTTCCCCCC-T-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECCSSCCCC-CT-TSTTCTTCCEEE
T ss_pred CCCCCEEECcCCCCCCC-h-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECcCCCCCC-Ch-hhccCCCCCEEE
Confidence 56788999999999754 3 69999999999999999997665 8999999999999999985 44 699999999999
Q ss_pred CcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCC-CCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccC
Q 003847 160 LSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGL-PSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEI 237 (791)
Q Consensus 160 ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~i 237 (791)
|++|+|++ + ..+..|++|+.|+|++|+|++.. ...+++|+.|+|++|+|++..| +.. .+|++|+|++|+|++ +
T Consensus 116 Ls~N~l~~-l-~~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls~N~i~~-l 190 (605)
T 1m9s_A 116 LEHNGISD-I-NGLVHLPQLESLYLGNNKITDITVLSRLTKLDTLSLEDNQISDIVP--LAGLTKLQNLYLSKNHISD-L 190 (605)
T ss_dssp CTTSCCCC-C-GGGGGCTTCSEEECCSSCCCCCGGGGSCTTCSEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCB-C
T ss_pred ecCCCCCC-C-ccccCCCccCEEECCCCccCCchhhcccCCCCEEECcCCcCCCchh--hccCCCCCEEECcCCCCCC-C
Confidence 99999995 3 46889999999999999999852 1245899999999999997666 544 689999999999994 5
Q ss_pred chhHhhcCCCCcEEEcccCcCcccC
Q 003847 238 PPQFGEKIPVNATIDLSFNNLTGEI 262 (791)
Q Consensus 238 p~~~~~~l~~l~~l~l~~N~l~~~~ 262 (791)
| .+.. +++|+.|+|++|++++..
T Consensus 191 ~-~l~~-l~~L~~L~L~~N~l~~~p 213 (605)
T 1m9s_A 191 R-ALAG-LKNLDVLELFSQECLNKP 213 (605)
T ss_dssp G-GGTT-CTTCSEEECCSEEEECCC
T ss_pred h-HHcc-CCCCCEEEccCCcCcCCc
Confidence 5 4555 999999999999998753
No 352
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.72 E-value=1.1e-17 Score=193.61 Aligned_cols=186 Identities=24% Similarity=0.247 Sum_probs=119.1
Q ss_pred CCccCCCCCCCCCCceeeeeeeCCCCCC-CCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCC
Q 003847 50 LGVLGSWNYNDENPCSWNGVTCASPGEG-NNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNA 128 (791)
Q Consensus 50 ~~~l~sw~~~~~~~c~w~gv~C~~~~~~-~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 128 (791)
....++|.. +.+||.|.|..|..+... -....++.|++++|+|+ .+|..+. ++|++|+|++|+|+ .+|. .+
T Consensus 9 ~~~w~~W~~-~~~~~~~~~r~~~~~~~~~c~~~~l~~L~ls~n~L~-~lp~~l~--~~L~~L~L~~N~l~-~lp~---~l 80 (622)
T 3g06_A 9 DAVWSAWRR-AAPAEESRGRAAVVQKMRACLNNGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPA---LP 80 (622)
T ss_dssp -CHHHHHHH-TCCGGGHHHHHHHHHHHHHHHHHCCCEEECCSSCCS-CCCSCCC--TTCSEEEECSCCCS-CCCC---CC
T ss_pred HHHHHHHHh-cCCcchhccccccCcccccccCCCCcEEEecCCCcC-ccChhhC--CCCcEEEecCCCCC-CCCC---cC
Confidence 345566763 446788866432111000 00234777888888887 5666555 67888888888887 4554 46
Q ss_pred CCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccc
Q 003847 129 SQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSN 208 (791)
Q Consensus 129 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N 208 (791)
++|++|+|++|+|+ .+|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|..+++|++|+|++|
T Consensus 81 ~~L~~L~Ls~N~l~-~lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~l~~L~~L~Ls~N 151 (622)
T 3g06_A 81 PELRTLEVSGNQLT-SLPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVLPPGLQELSVSDN 151 (622)
T ss_dssp TTCCEEEECSCCCS-CCCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCCCTTCCEEECCSS
T ss_pred CCCCEEEcCCCcCC-cCCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCCCCCCCEEECcCC
Confidence 77888888888887 4555 56778888888888774 444 45677777777777776 5556677777777777
Q ss_pred cccccCCCCcCCccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcc
Q 003847 209 LINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTG 260 (791)
Q Consensus 209 ~l~~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~ 260 (791)
+|++ +|..+ .+|+.|++++|+|+ .+| ..+++|+.|+|++|+|++
T Consensus 152 ~l~~-l~~~~--~~L~~L~L~~N~l~-~l~----~~~~~L~~L~Ls~N~l~~ 195 (622)
T 3g06_A 152 QLAS-LPALP--SELCKLWAYNNQLT-SLP----MLPSGLQELSVSDNQLAS 195 (622)
T ss_dssp CCSC-CCCCC--TTCCEEECCSSCCS-CCC----CCCTTCCEEECCSSCCSC
T ss_pred cCCC-cCCcc--CCCCEEECCCCCCC-CCc----ccCCCCcEEECCCCCCCC
Confidence 7763 34322 35666666666666 455 225666666666666664
No 353
>3e6j_A Variable lymphocyte receptor diversity region; variable lymphocyte receptors, VLR, leucine-rich repeat, LRR adaptive immunity, immune system; HET: DR2; 1.67A {Petromyzon marinus}
Probab=99.72 E-value=3.1e-17 Score=166.38 Aligned_cols=143 Identities=23% Similarity=0.206 Sum_probs=117.3
Q ss_pred ceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCC
Q 003847 64 CSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISG 143 (791)
Q Consensus 64 c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 143 (791)
|+-.+++-. |.. ...+++.|+|++|+|++..|..|..+++|++|+|++|+|++..+..|.++++|++|+|++|+|++
T Consensus 26 c~~~~l~~i-p~~--~~~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L~L~~N~l~~i~~~~~~~l~~L~~L~Ls~N~l~~ 102 (229)
T 3e6j_A 26 CRSKRHASV-PAG--IPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVLDLGTNQLTV 102 (229)
T ss_dssp CTTSCCSSC-CSC--CCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCC
T ss_pred ccCCCcCcc-CCC--CCCCCCEEEcCCCccCccCHHHhhCccCCcEEECCCCCCCCcChhhcccCCCcCEEECCCCcCCc
Confidence 565555543 221 24789999999999999999999999999999999999987777788999999999999999998
Q ss_pred CCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccc
Q 003847 144 HLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLI 210 (791)
Q Consensus 144 ~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l 210 (791)
..+..|..+++|++|+|++|+|+ .+|..+..+++|+.|+|++|+|++..+..| ++|+.|+|++|.+
T Consensus 103 l~~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~~ 171 (229)
T 3e6j_A 103 LPSAVFDRLVHLKELFMCCNKLT-ELPRGIERLTHLTHLALDQNQLKSIPHGAFDRLSSLTHAYLFGNPW 171 (229)
T ss_dssp CCTTTTTTCTTCCEEECCSSCCC-SCCTTGGGCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECTTSCB
T ss_pred cChhHhCcchhhCeEeccCCccc-ccCcccccCCCCCEEECCCCcCCccCHHHHhCCCCCCEEEeeCCCc
Confidence 77888999999999999999999 889999999999999999999987544333 3344444444433
No 354
>3g06_A SSPH2 (leucine-rich repeat protein); E3 ubiquitin ligase, leucine rich repeat domain, type three effector, salmonella virulence factor; 1.90A {Salmonella typhimurium}
Probab=99.72 E-value=6e-17 Score=187.33 Aligned_cols=180 Identities=28% Similarity=0.309 Sum_probs=96.5
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEe
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLN 159 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ 159 (791)
..+++.|+|++|+|++ +|. .+++|++|+|++|+|++ +|. .+++|+.|+|++|+|++ +|.. +++|++|+
T Consensus 80 l~~L~~L~Ls~N~l~~-lp~---~l~~L~~L~Ls~N~l~~-l~~---~l~~L~~L~L~~N~l~~-lp~~---l~~L~~L~ 147 (622)
T 3g06_A 80 PPELRTLEVSGNQLTS-LPV---LPPGLLELSIFSNPLTH-LPA---LPSGLCKLWIFGNQLTS-LPVL---PPGLQELS 147 (622)
T ss_dssp CTTCCEEEECSCCCSC-CCC---CCTTCCEEEECSCCCCC-CCC---CCTTCCEEECCSSCCSC-CCCC---CTTCCEEE
T ss_pred CCCCCEEEcCCCcCCc-CCC---CCCCCCEEECcCCcCCC-CCC---CCCCcCEEECCCCCCCc-CCCC---CCCCCEEE
Confidence 4677788888888764 443 55667777777777664 232 23444444444444442 2221 13333333
Q ss_pred CcCCcCCCCCccccC-----------------CCCCCCEEeCCCCcCCC-------------------CCCCCCccccee
Q 003847 160 LSDNALAGKLPVSLT-----------------TLQSLTIVSLKNNYFSD-------------------GLPSKFNSVQVL 203 (791)
Q Consensus 160 ls~N~l~~~~p~~~~-----------------~l~~L~~L~L~~N~l~~-------------------~~p~~l~~L~~L 203 (791)
|++|+|++ +|..+. .+++|+.|+|++|+|++ .+|..+++|+.|
T Consensus 148 Ls~N~l~~-l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L~Ls~N~l~~l~~~~~~L~~L~L~~N~l~~l~~~~~~L~~L 226 (622)
T 3g06_A 148 VSDNQLAS-LPALPSELCKLWAYNNQLTSLPMLPSGLQELSVSDNQLASLPTLPSELYKLWAYNNRLTSLPALPSGLKEL 226 (622)
T ss_dssp CCSSCCSC-CCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSCCCCCCTTCCEEECCSSCCSSCCCCCTTCCEE
T ss_pred CcCCcCCC-cCCccCCCCEEECCCCCCCCCcccCCCCcEEECCCCCCCCCCCccchhhEEECcCCcccccCCCCCCCCEE
Confidence 33333332 111111 11344444444444443 123333566777
Q ss_pred ccccccccccCCCCcCCccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC-CcccccccccccCCCC
Q 003847 204 DLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES-NVFMNQESSSFSGNLD 281 (791)
Q Consensus 204 ~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-~~~~~~~~~~~~~n~~ 281 (791)
+|++|+|++ +|.. ..+|++|+|++|+|+ .+|. .+++|+.|+|++|+|+ .+|.. ..+.++..+.+.+|+.
T Consensus 227 ~Ls~N~L~~-lp~~--l~~L~~L~Ls~N~L~-~lp~----~~~~L~~L~Ls~N~L~-~lp~~l~~l~~L~~L~L~~N~l 296 (622)
T 3g06_A 227 IVSGNRLTS-LPVL--PSELKELMVSGNRLT-SLPM----LPSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPL 296 (622)
T ss_dssp ECCSSCCSC-CCCC--CTTCCEEECCSSCCS-CCCC----CCTTCCEEECCSSCCC-SCCGGGGGSCTTCEEECCSCCC
T ss_pred EccCCccCc-CCCC--CCcCcEEECCCCCCC-cCCc----ccccCcEEeCCCCCCC-cCCHHHhhccccCEEEecCCCC
Confidence 777777764 4421 146777777777777 6665 2677777777777777 44543 3344555566666654
No 355
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.71 E-value=1.3e-17 Score=172.99 Aligned_cols=167 Identities=21% Similarity=0.259 Sum_probs=132.0
Q ss_pred CcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeC
Q 003847 81 SRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNL 160 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 160 (791)
.+++.++|.++++++.. .+..+++|+.|+|++|.|+ .++ .+..+++|++|+|++|+|++..+ +.++++|+.|+|
T Consensus 19 ~~l~~l~l~~~~i~~~~--~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L~L 92 (263)
T 1xeu_A 19 ANAVKQNLGKQSVTDLV--SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEELSV 92 (263)
T ss_dssp HHHHHHHHTCSCTTSEE--CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEEEC
T ss_pred HHHHHHHhcCCCccccc--chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEEEC
Confidence 45666778888887554 5788899999999999998 455 68889999999999999985444 889999999999
Q ss_pred cCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC-CCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCc
Q 003847 161 SDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP-SKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIP 238 (791)
Q Consensus 161 s~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip 238 (791)
++|++++ +|.. .. ++|+.|+|++|+|++... ..+++|+.|+|++|+|++. + .+.. .+|++|+|++|+|++.
T Consensus 93 ~~N~l~~-l~~~-~~-~~L~~L~L~~N~l~~~~~l~~l~~L~~L~Ls~N~i~~~-~-~l~~l~~L~~L~L~~N~i~~~-- 165 (263)
T 1xeu_A 93 NRNRLKN-LNGI-PS-ACLSRLFLDNNELRDTDSLIHLKNLEILSIRNNKLKSI-V-MLGFLSKLEVLDLHGNEITNT-- 165 (263)
T ss_dssp CSSCCSC-CTTC-CC-SSCCEEECCSSCCSBSGGGTTCTTCCEEECTTSCCCBC-G-GGGGCTTCCEEECTTSCCCBC--
T ss_pred CCCccCC-cCcc-cc-CcccEEEccCCccCCChhhcCcccccEEECCCCcCCCC-h-HHccCCCCCEEECCCCcCcch--
Confidence 9999985 4433 33 899999999999987421 2457899999999999854 4 3444 5899999999999854
Q ss_pred hhHhhcCCCCcEEEcccCcCccc
Q 003847 239 PQFGEKIPVNATIDLSFNNLTGE 261 (791)
Q Consensus 239 ~~~~~~l~~l~~l~l~~N~l~~~ 261 (791)
..+.. +++|+.|+|++|++++.
T Consensus 166 ~~l~~-l~~L~~L~l~~N~~~~~ 187 (263)
T 1xeu_A 166 GGLTR-LKKVNWIDLTGQKCVNE 187 (263)
T ss_dssp TTSTT-CCCCCEEEEEEEEEECC
T ss_pred HHhcc-CCCCCEEeCCCCcccCC
Confidence 44444 99999999999999865
No 356
>4fmz_A Internalin; leucine rich repeat, structural genomic center for structural genomics, JCSG, protein structure INI PSI-biology; HET: MSE; 1.91A {Listeria monocytogenes serotype 4B}
Probab=99.71 E-value=8.6e-17 Score=173.93 Aligned_cols=190 Identities=22% Similarity=0.306 Sum_probs=139.3
Q ss_pred CCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCE
Q 003847 78 NNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQL 157 (791)
Q Consensus 78 ~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~ 157 (791)
....+++.|+|++|++++..+ |..+++|++|+|++|.+++ ++ .|.++++|++|+|++|++++ ++. +..+++|+.
T Consensus 63 ~~~~~L~~L~l~~n~i~~~~~--~~~l~~L~~L~L~~n~i~~-~~-~~~~l~~L~~L~l~~n~i~~-~~~-~~~l~~L~~ 136 (347)
T 4fmz_A 63 EYLTNLEYLNLNGNQITDISP--LSNLVKLTNLYIGTNKITD-IS-ALQNLTNLRELYLNEDNISD-ISP-LANLTKMYS 136 (347)
T ss_dssp GGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSSCCCC-CG-GGTTCTTCSEEECTTSCCCC-CGG-GTTCTTCCE
T ss_pred hhcCCccEEEccCCccccchh--hhcCCcCCEEEccCCcccC-ch-HHcCCCcCCEEECcCCcccC-chh-hccCCceeE
Confidence 346788888888888876533 8888888999998888885 34 58888888899998888884 444 888888888
Q ss_pred EeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC-CCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcc
Q 003847 158 LNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP-SKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSG 235 (791)
Q Consensus 158 L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g 235 (791)
|++++|.....++ .+..+++|++|++++|.+.+..+ ..+++|+.|++++|.+++. +. +.. .+|++|++++|.+++
T Consensus 137 L~l~~n~~~~~~~-~~~~l~~L~~L~l~~~~~~~~~~~~~l~~L~~L~l~~n~l~~~-~~-~~~l~~L~~L~l~~n~l~~ 213 (347)
T 4fmz_A 137 LNLGANHNLSDLS-PLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLNYNQIEDI-SP-LASLTSLHYFTAYVNQITD 213 (347)
T ss_dssp EECTTCTTCCCCG-GGTTCTTCCEEECCSSCCCCCGGGGGCTTCSEEECTTSCCCCC-GG-GGGCTTCCEEECCSSCCCC
T ss_pred EECCCCCCccccc-chhhCCCCcEEEecCCCcCCchhhccCCCCCEEEccCCccccc-cc-ccCCCccceeecccCCCCC
Confidence 8888886664444 48888888888888888877543 3447888888888888743 33 333 578888888888874
Q ss_pred cCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCC
Q 003847 236 EIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNL 280 (791)
Q Consensus 236 ~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 280 (791)
. +. +.. +++|+.|+|++|++++..+ ...+.++..+.+.+|.
T Consensus 214 ~-~~-~~~-~~~L~~L~l~~n~l~~~~~-~~~l~~L~~L~l~~n~ 254 (347)
T 4fmz_A 214 I-TP-VAN-MTRLNSLKIGNNKITDLSP-LANLSQLTWLEIGTNQ 254 (347)
T ss_dssp C-GG-GGG-CTTCCEEECCSSCCCCCGG-GTTCTTCCEEECCSSC
T ss_pred C-ch-hhc-CCcCCEEEccCCccCCCcc-hhcCCCCCEEECCCCc
Confidence 3 33 433 8888888888888876554 3444555556665553
No 357
>4ezg_A Putative uncharacterized protein; internalin-A, leucine-rich repeat protein, structural genomi center for structural genomics, JCSG; HET: MSE; 1.50A {Listeria monocytogenes}
Probab=99.71 E-value=2.5e-17 Score=162.91 Aligned_cols=131 Identities=17% Similarity=0.172 Sum_probs=109.9
Q ss_pred CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCC
Q 003847 77 GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQ 156 (791)
Q Consensus 77 ~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~ 156 (791)
+....+++.|+|++|.+. .++.+..+++|++|+|++|+|++..+..|.++++|++|+|++|++++..|..+.++++|+
T Consensus 62 l~~l~~L~~L~l~~n~~~--~~~~l~~l~~L~~L~l~~n~l~~~~~~~l~~l~~L~~L~Ls~n~i~~~~~~~l~~l~~L~ 139 (197)
T 4ezg_A 62 IEYAHNIKDLTINNIHAT--NYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKINTLPKVN 139 (197)
T ss_dssp GGGCTTCSEEEEESCCCS--CCGGGTTCTTCCEEEEECTTCBGGGSCCCTTCTTCCEEECCSSBCBGGGHHHHTTCSSCC
T ss_pred HhcCCCCCEEEccCCCCC--cchhhhcCCCCCEEEeECCccCcccChhhcCCCCCCEEEecCCccCcHhHHHHhhCCCCC
Confidence 455778999999999764 345899999999999999999988899999999999999999999988899999999999
Q ss_pred EEeCcCCc-CCCCCccccCCCCCCCEEeCCCCcCCCCC-CCCCcccceecccccccc
Q 003847 157 LLNLSDNA-LAGKLPVSLTTLQSLTIVSLKNNYFSDGL-PSKFNSVQVLDLSSNLIN 211 (791)
Q Consensus 157 ~L~ls~N~-l~~~~p~~~~~l~~L~~L~L~~N~l~~~~-p~~l~~L~~L~ls~N~l~ 211 (791)
+|+|++|+ ++ .+| .+..+++|+.|+|++|++++.. ...+++|+.|++++|+|.
T Consensus 140 ~L~L~~n~~i~-~~~-~l~~l~~L~~L~l~~n~i~~~~~l~~l~~L~~L~l~~N~i~ 194 (197)
T 4ezg_A 140 SIDLSYNGAIT-DIM-PLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFSQTIG 194 (197)
T ss_dssp EEECCSCTBCC-CCG-GGGGCSSCCEEECTTBCCCCCTTGGGCSSCCEEEECBC---
T ss_pred EEEccCCCCcc-ccH-hhcCCCCCCEEECCCCCCcChHHhccCCCCCEEEeeCcccC
Confidence 99999998 65 666 6899999999999999998742 123466777777777664
No 358
>4b8c_D Glucose-repressible alcohol dehydrogenase transcr effector; hydrolase-cell cycle complex; 3.41A {Saccharomyces cerevisiae S288C}
Probab=99.70 E-value=5.1e-18 Score=200.93 Aligned_cols=150 Identities=25% Similarity=0.300 Sum_probs=110.5
Q ss_pred CCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCC
Q 003847 96 SIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTT 175 (791)
Q Consensus 96 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 175 (791)
..+..|..++.|+.|+|++|+|. .+|..+.++++|++|+|++|.|+ .+|..|++|++|++|+|++|+|+ .+|..|.+
T Consensus 215 ~~~~~~~~l~~L~~L~Ls~n~l~-~l~~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~-~lp~~~~~ 291 (727)
T 4b8c_D 215 MPKDSKYDDQLWHALDLSNLQIF-NISANIFKYDFLTRLYLNGNSLT-ELPAEIKNLSNLRVLDLSHNRLT-SLPAELGS 291 (727)
T ss_dssp -------CCCCCCEEECTTSCCS-CCCGGGGGCCSCSCCBCTTSCCS-CCCGGGGGGTTCCEEECTTSCCS-SCCSSGGG
T ss_pred cChhhhccCCCCcEEECCCCCCC-CCChhhcCCCCCCEEEeeCCcCc-ccChhhhCCCCCCEEeCcCCcCC-ccChhhcC
Confidence 44677888888999999999888 67777778888999999999888 78888888889999999999988 77888888
Q ss_pred CCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCCc--cccEEEccCCcCcccCchhHhhcCCCCcE
Q 003847 176 LQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGGY--SLRYLNLSYNRLSGEIPPQFGEKIPVNAT 250 (791)
Q Consensus 176 l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~~--~L~~L~l~~N~l~g~ip~~~~~~l~~l~~ 250 (791)
|++|++|+|++|.|+ .+|..| ++|++|+|++|.|++.+|..+... .+..|+|++|.++|.+|..+ ..
T Consensus 292 l~~L~~L~L~~N~l~-~lp~~~~~l~~L~~L~L~~N~l~~~~p~~~~~~~~~~~~l~l~~N~l~~~~p~~l-------~~ 363 (727)
T 4b8c_D 292 CFQLKYFYFFDNMVT-TLPWEFGNLCNLQFLGVEGNPLEKQFLKILTEKSVTGLIFYLRDNRPEIPLPHER-------RF 363 (727)
T ss_dssp GTTCSEEECCSSCCC-CCCSSTTSCTTCCCEECTTSCCCSHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC----------
T ss_pred CCCCCEEECCCCCCC-ccChhhhcCCCccEEeCCCCccCCCChHHHhhcchhhhHHhhccCcccCcCcccc-------ce
Confidence 889999999999887 456545 678888999999888888777653 33457888898888887644 44
Q ss_pred EEcccC
Q 003847 251 IDLSFN 256 (791)
Q Consensus 251 l~l~~N 256 (791)
|+++.|
T Consensus 364 l~l~~n 369 (727)
T 4b8c_D 364 IEINTD 369 (727)
T ss_dssp ------
T ss_pred eEeecc
Confidence 666666
No 359
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.70 E-value=7e-19 Score=191.65 Aligned_cols=200 Identities=21% Similarity=0.232 Sum_probs=146.2
Q ss_pred CCcEEEEEcCCCCCccCCC----cCCCCCC-CCCEEeCcCCCCCCCCcccccCC-----CCccEEEccCCcCCCCCcccc
Q 003847 80 DSRVIGLALPNSQLLGSIP----ADLGMIE-FLQYLDLSNNSLNGSLSFSLFNA-----SQLRNLDLSNNLISGHLPETM 149 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~L~~L~L~~N~l~~~~p~~~ 149 (791)
..+++.|+|++|++++..+ ..|..++ +|++|+|++|+|++..+..|..+ ++|++|+|++|+|++..+..+
T Consensus 21 ~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~~~~~~~l 100 (362)
T 3goz_A 21 PHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPANVTSLNLSGNFLSYKSSDEL 100 (362)
T ss_dssp CTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHH
T ss_pred CCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCCccEEECcCCcCChHHHHHH
Confidence 3458899999999887776 6778888 89999999999987777777765 889999999999987776644
Q ss_pred C----CC-CCCCEEeCcCCcCCCCCcccc----CC-CCCCCEEeCCCCcCCCCCCCC-------C-cccceecccccccc
Q 003847 150 G----SL-HNLQLLNLSDNALAGKLPVSL----TT-LQSLTIVSLKNNYFSDGLPSK-------F-NSVQVLDLSSNLIN 211 (791)
Q Consensus 150 ~----~l-~~L~~L~ls~N~l~~~~p~~~----~~-l~~L~~L~L~~N~l~~~~p~~-------l-~~L~~L~ls~N~l~ 211 (791)
. .+ ++|++|+|++|+|++..+..+ .. .++|++|+|++|+|++..+.. + ++|++|+|++|+|+
T Consensus 101 ~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~n~l~ 180 (362)
T 3goz_A 101 VKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQILAAIPANVNSLNLRGNNLA 180 (362)
T ss_dssp HHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGG
T ss_pred HHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHHHhcCCccccEeeecCCCCc
Confidence 3 34 789999999999986666543 34 368999999999988644332 2 38999999999998
Q ss_pred ccCCCCcCC------ccccEEEccCCcCccc----CchhHhhcCCCCcEEEcccCcCcccCCCC-----Ccccccccccc
Q 003847 212 GSLPPDIGG------YSLRYLNLSYNRLSGE----IPPQFGEKIPVNATIDLSFNNLTGEIPES-----NVFMNQESSSF 276 (791)
Q Consensus 212 ~~~p~~~~~------~~L~~L~l~~N~l~g~----ip~~~~~~l~~l~~l~l~~N~l~~~~p~~-----~~~~~~~~~~~ 276 (791)
+..+..+.. .+|++|+|++|.|++. ++..+....++|++|||++|++++..+.. ..+.++..+.+
T Consensus 181 ~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~~~~l~~L~~L~L 260 (362)
T 3goz_A 181 SKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNCLHGPSLENLKLLKDSLKHLQTVYL 260 (362)
T ss_dssp GSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSCCCCCCHHHHHHTTTTTTTCSEEEE
T ss_pred hhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCCCCcHHHHHHHHHHhcCCCccEEEe
Confidence 666544332 3799999999998852 56666553458999999999987654311 22334555555
Q ss_pred cCC
Q 003847 277 SGN 279 (791)
Q Consensus 277 ~~n 279 (791)
.+|
T Consensus 261 ~~n 263 (362)
T 3goz_A 261 DYD 263 (362)
T ss_dssp EHH
T ss_pred ccC
Confidence 555
No 360
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.70 E-value=2.9e-19 Score=196.49 Aligned_cols=205 Identities=20% Similarity=0.179 Sum_probs=158.2
Q ss_pred CCCCcEEEEEcCCC---CCccCCCcCC-------CCCCCCCEEeCcCCCCCC----CCcccccCCCCccEEEccCCcCCC
Q 003847 78 NNDSRVIGLALPNS---QLLGSIPADL-------GMIEFLQYLDLSNNSLNG----SLSFSLFNASQLRNLDLSNNLISG 143 (791)
Q Consensus 78 ~~~~~v~~L~L~~~---~l~~~~~~~~-------~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~ 143 (791)
....+++.|+|++| ++.+.+|..+ ..+++|++|+|++|.|++ .+|..+.++++|++|+|++|.|++
T Consensus 57 ~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~ 136 (386)
T 2ca6_A 57 ASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTAQEPLIDFLSKHTPLEHLYLHNNGLGP 136 (386)
T ss_dssp TTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTTHHHHHHHHHHCTTCCEEECCSSCCHH
T ss_pred HhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHHHHHHHHHHHhCCCCCEEECcCCCCCH
Confidence 34678999999985 5566667655 789999999999999997 477788999999999999999975
Q ss_pred CCccc----cCCC---------CCCCEEeCcCCcCC-CCCc---cccCCCCCCCEEeCCCCcCCC-----CCC---CCCc
Q 003847 144 HLPET----MGSL---------HNLQLLNLSDNALA-GKLP---VSLTTLQSLTIVSLKNNYFSD-----GLP---SKFN 198 (791)
Q Consensus 144 ~~p~~----~~~l---------~~L~~L~ls~N~l~-~~~p---~~~~~l~~L~~L~L~~N~l~~-----~~p---~~l~ 198 (791)
..+.. +..+ ++|++|+|++|+++ +.++ ..+..+++|++|+|++|+|+. .++ ..++
T Consensus 137 ~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~l~~~g~~~l~~~~l~~~~ 216 (386)
T 2ca6_A 137 QAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLHTVKMVQNGIRPEGIEHLLLEGLAYCQ 216 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCCEEECCSSCCCHHHHHHHHHTTGGGCT
T ss_pred HHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcCEEECcCCCCCHhHHHHHHHHHhhcCC
Confidence 44433 3334 89999999999997 4455 467788999999999999983 233 2347
Q ss_pred ccceecccccccc----ccCCCCcCC-ccccEEEccCCcCccc----CchhHh-hcCCCCcEEEcccCcCcc----cCCC
Q 003847 199 SVQVLDLSSNLIN----GSLPPDIGG-YSLRYLNLSYNRLSGE----IPPQFG-EKIPVNATIDLSFNNLTG----EIPE 264 (791)
Q Consensus 199 ~L~~L~ls~N~l~----~~~p~~~~~-~~L~~L~l~~N~l~g~----ip~~~~-~~l~~l~~l~l~~N~l~~----~~p~ 264 (791)
+|+.|+|++|.|+ +.+|..+.. .+|++|+|++|+|++. +|..+. ..+++|+.|+|++|++++ .+|.
T Consensus 217 ~L~~L~Ls~n~l~~~g~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~~L~~L~L~~n~i~~~g~~~l~~ 296 (386)
T 2ca6_A 217 ELKVLDLQDNTFTHLGSSALAIALKSWPNLRELGLNDCLLSARGAAAVVDAFSKLENIGLQTLRLQYNEIELDAVRTLKT 296 (386)
T ss_dssp TCCEEECCSSCCHHHHHHHHHHHGGGCTTCCEEECTTCCCCHHHHHHHHHHHHTCSSCCCCEEECCSSCCBHHHHHHHHH
T ss_pred CccEEECcCCCCCcHHHHHHHHHHccCCCcCEEECCCCCCchhhHHHHHHHHhhccCCCeEEEECcCCcCCHHHHHHHHH
Confidence 8999999999996 567766655 5899999999999865 455542 127899999999999998 4665
Q ss_pred CC--cccccccccccCCCCC
Q 003847 265 SN--VFMNQESSSFSGNLDL 282 (791)
Q Consensus 265 ~~--~~~~~~~~~~~~n~~l 282 (791)
.. .+.++..+.+.+|+..
T Consensus 297 ~l~~~l~~L~~L~l~~N~l~ 316 (386)
T 2ca6_A 297 VIDEKMPDLLFLELNGNRFS 316 (386)
T ss_dssp HHHHHCTTCCEEECTTSBSC
T ss_pred HHHhcCCCceEEEccCCcCC
Confidence 43 2466777778787654
No 361
>1h6t_A Internalin B; cell adhesion, leucine rich repeat, IG-like domain, EF-hand domain; 1.6A {Listeria monocytogenes} SCOP: b.1.18.15 c.10.2.1 PDB: 2wqu_A 2uzy_A 2uzx_A 2wqv_A* 2wqw_A 2wqx_A 1d0b_A 1otn_A 1oto_A 1otm_A
Probab=99.70 E-value=4.3e-17 Score=171.65 Aligned_cols=184 Identities=21% Similarity=0.230 Sum_probs=147.0
Q ss_pred EEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCC
Q 003847 84 IGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDN 163 (791)
Q Consensus 84 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 163 (791)
..+.+..+.+.+.. .+..+++|+.|++++|.+... + .+..+++|++|+|++|+|++..+ +.++++|++|+|++|
T Consensus 27 ~~~~l~~~~~~~~~--~~~~l~~L~~L~l~~~~i~~~-~-~~~~l~~L~~L~L~~n~l~~~~~--l~~l~~L~~L~l~~n 100 (291)
T 1h6t_A 27 IKDNLKKKSVTDAV--TQNELNSIDQIIANNSDIKSV-Q-GIQYLPNVTKLFLNGNKLTDIKP--LANLKNLGWLFLDEN 100 (291)
T ss_dssp HHHHTTCSCTTSEE--CHHHHHTCCEEECTTSCCCCC-T-TGGGCTTCCEEECCSSCCCCCGG--GTTCTTCCEEECCSS
T ss_pred HHHHhcCCCccccc--chhhcCcccEEEccCCCcccC-h-hHhcCCCCCEEEccCCccCCCcc--cccCCCCCEEECCCC
Confidence 34455566665443 345789999999999999854 4 48899999999999999996544 999999999999999
Q ss_pred cCCCCCccccCCCCCCCEEeCCCCcCCCCCC-CCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhH
Q 003847 164 ALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP-SKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQF 241 (791)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~ 241 (791)
++++ +| .+..+++|++|+|++|++++... ..+++|+.|+|++|+|++. ..+.. .+|++|+|++|+|++ ++. +
T Consensus 101 ~l~~-~~-~l~~l~~L~~L~L~~n~i~~~~~l~~l~~L~~L~l~~n~l~~~--~~l~~l~~L~~L~L~~N~l~~-~~~-l 174 (291)
T 1h6t_A 101 KVKD-LS-SLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISD-IVP-L 174 (291)
T ss_dssp CCCC-GG-GGTTCTTCCEEECTTSCCCCCGGGGGCTTCCEEECCSSCCCCC--GGGGGCTTCSEEECCSSCCCC-CGG-G
T ss_pred cCCC-Ch-hhccCCCCCEEECCCCcCCCChhhcCCCCCCEEEccCCcCCcc--hhhccCCCCCEEEccCCcccc-chh-h
Confidence 9985 44 49999999999999999998421 2358899999999999864 34444 689999999999995 444 5
Q ss_pred hhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCC
Q 003847 242 GEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLD 281 (791)
Q Consensus 242 ~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 281 (791)
.. +++|+.|+|++|++++. |....+.++..+.+.+|+.
T Consensus 175 ~~-l~~L~~L~L~~N~i~~l-~~l~~l~~L~~L~l~~n~i 212 (291)
T 1h6t_A 175 AG-LTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 212 (291)
T ss_dssp TT-CTTCCEEECCSSCCCBC-GGGTTCTTCSEEEEEEEEE
T ss_pred cC-CCccCEEECCCCcCCCC-hhhccCCCCCEEECcCCcc
Confidence 44 99999999999999864 4455566777777777754
No 362
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.70 E-value=6.3e-19 Score=189.86 Aligned_cols=173 Identities=24% Similarity=0.218 Sum_probs=78.3
Q ss_pred cEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCC-CcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeC
Q 003847 82 RVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGS-LSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNL 160 (791)
Q Consensus 82 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~l 160 (791)
+++.|+|++|.+.+..+. +..+++|++|+|++|.+++. ++..+.++++|++|+|++|.+++..+..++++++|++|+|
T Consensus 71 ~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L 149 (336)
T 2ast_B 71 GVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNSVIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNL 149 (336)
T ss_dssp TCSEEECTTCEECSCCCS-CCCCBCCCEEECTTCEECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEEC
T ss_pred cceEEEcCCccccccchh-hccCCCCCEEEccCCCcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEEC
Confidence 444445555544444333 33445555555555554433 4444445555555555555554444444555555555555
Q ss_pred cCC-cCCCC-CccccCCCCCCCEEeCCCC-cCCCC-CCC---CCc-ccceeccccc--ccc-ccCCCCcCC-ccccEEEc
Q 003847 161 SDN-ALAGK-LPVSLTTLQSLTIVSLKNN-YFSDG-LPS---KFN-SVQVLDLSSN--LIN-GSLPPDIGG-YSLRYLNL 228 (791)
Q Consensus 161 s~N-~l~~~-~p~~~~~l~~L~~L~L~~N-~l~~~-~p~---~l~-~L~~L~ls~N--~l~-~~~p~~~~~-~~L~~L~l 228 (791)
++| .+++. ++..+.++++|++|+|++| .+++. ++. .++ +|++|+|++| .++ +.+|..+.. .+|++|+|
T Consensus 150 ~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~~~~L~~L~l 229 (336)
T 2ast_B 150 SGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTEKHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRRCPNLVHLDL 229 (336)
T ss_dssp TTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCHHHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHHCTTCSEEEC
T ss_pred CCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcChHHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhhCCCCCEEeC
Confidence 555 34431 3334444555555555555 44432 121 123 4555555555 222 222222222 24555555
Q ss_pred cCCc-CcccCchhHhhcCCCCcEEEcccC
Q 003847 229 SYNR-LSGEIPPQFGEKIPVNATIDLSFN 256 (791)
Q Consensus 229 ~~N~-l~g~ip~~~~~~l~~l~~l~l~~N 256 (791)
++|. +++..+..+.. +++|++|+|++|
T Consensus 230 ~~~~~l~~~~~~~l~~-l~~L~~L~l~~~ 257 (336)
T 2ast_B 230 SDSVMLKNDCFQEFFQ-LNYLQHLSLSRC 257 (336)
T ss_dssp TTCTTCCGGGGGGGGG-CTTCCEEECTTC
T ss_pred CCCCcCCHHHHHHHhC-CCCCCEeeCCCC
Confidence 5554 44444444433 455555555555
No 363
>2ca6_A RAN GTPase-activating protein 1; GAP, GTPase activation, hemihedral twinning, leucine-rich repeat protein, LRR, merohedral twinning; 2.2A {Schizosaccharomyces pombe} SCOP: c.10.1.2 PDB: 1k5g_C* 1k5d_C 1yrg_A
Probab=99.69 E-value=7.5e-19 Score=193.20 Aligned_cols=200 Identities=16% Similarity=0.208 Sum_probs=155.7
Q ss_pred CCcEEEEEcCCCCCccC----CCcCCCCCCCCCEEeCcCCC---CCCCCcccc-------cCCCCccEEEccCCcCCC--
Q 003847 80 DSRVIGLALPNSQLLGS----IPADLGMIEFLQYLDLSNNS---LNGSLSFSL-------FNASQLRNLDLSNNLISG-- 143 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~----~~~~~~~l~~L~~L~L~~N~---l~~~~p~~~-------~~l~~L~~L~L~~N~l~~-- 143 (791)
..+++.|+|++|++... ++..|..+++|++|+|++|. +++.+|..+ .++++|++|+|++|.|++
T Consensus 31 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~Ls~~~~~~l~~~~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~ 110 (386)
T 2ca6_A 31 DDSVKEIVLSGNTIGTEAARWLSENIASKKDLEIAEFSDIFTGRVKDEIPEALRLLLQALLKCPKLHTVRLSDNAFGPTA 110 (386)
T ss_dssp CSCCCEEECTTSEECHHHHHHHHHTTTTCTTCCEEECCSCCTTSCGGGSHHHHHHHHHHHTTCTTCCEEECCSCCCCTTT
T ss_pred CCCccEEECCCCCCCHHHHHHHHHHHHhCCCccEEeCcccccCccccchhHHHHHHHHHHhhCCcccEEECCCCcCCHHH
Confidence 45789999999999876 34458899999999999964 445566555 688999999999999997
Q ss_pred --CCccccCCCCCCCEEeCcCCcCCCCCccccC----CC---------CCCCEEeCCCCcCC-CCCC---C---CCcccc
Q 003847 144 --HLPETMGSLHNLQLLNLSDNALAGKLPVSLT----TL---------QSLTIVSLKNNYFS-DGLP---S---KFNSVQ 201 (791)
Q Consensus 144 --~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~----~l---------~~L~~L~L~~N~l~-~~~p---~---~l~~L~ 201 (791)
.+|..+.++++|++|+|++|.|+...+..+. .+ ++|++|+|++|+|+ +.++ . .+++|+
T Consensus 111 ~~~l~~~l~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~l~~~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~ 190 (386)
T 2ca6_A 111 QEPLIDFLSKHTPLEHLYLHNNGLGPQAGAKIARALQELAVNKKAKNAPPLRSIICGRNRLENGSMKEWAKTFQSHRLLH 190 (386)
T ss_dssp HHHHHHHHHHCTTCCEEECCSSCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCEEECCSSCCTGGGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHhCCCCCEEECcCCCCCHHHHHHHHHHHHHHhhhhhcccCCCCcEEECCCCCCCcHHHHHHHHHHHhCCCcC
Confidence 4788899999999999999999754444333 34 89999999999998 3444 2 347899
Q ss_pred eecccccccc--c---cCCCCcCC-ccccEEEccCCcCc----ccCchhHhhcCCCCcEEEcccCcCccc----CCCC--
Q 003847 202 VLDLSSNLIN--G---SLPPDIGG-YSLRYLNLSYNRLS----GEIPPQFGEKIPVNATIDLSFNNLTGE----IPES-- 265 (791)
Q Consensus 202 ~L~ls~N~l~--~---~~p~~~~~-~~L~~L~l~~N~l~----g~ip~~~~~~l~~l~~l~l~~N~l~~~----~p~~-- 265 (791)
.|+|++|+|+ | .++..+.. .+|++|+|++|.|+ +.+|..+.. +++|++|+|++|++++. +|..
T Consensus 191 ~L~L~~n~l~~~g~~~l~~~~l~~~~~L~~L~Ls~n~l~~~g~~~l~~~l~~-~~~L~~L~L~~n~i~~~~~~~l~~~l~ 269 (386)
T 2ca6_A 191 TVKMVQNGIRPEGIEHLLLEGLAYCQELKVLDLQDNTFTHLGSSALAIALKS-WPNLRELGLNDCLLSARGAAAVVDAFS 269 (386)
T ss_dssp EEECCSSCCCHHHHHHHHHTTGGGCTTCCEEECCSSCCHHHHHHHHHHHGGG-CTTCCEEECTTCCCCHHHHHHHHHHHH
T ss_pred EEECcCCCCCHhHHHHHHHHHhhcCCCccEEECcCCCCCcHHHHHHHHHHcc-CCCcCEEECCCCCCchhhHHHHHHHHh
Confidence 9999999997 3 34435544 58999999999996 578887776 99999999999999865 3332
Q ss_pred -CcccccccccccCCC
Q 003847 266 -NVFMNQESSSFSGNL 280 (791)
Q Consensus 266 -~~~~~~~~~~~~~n~ 280 (791)
....++..+.+.+|.
T Consensus 270 ~~~~~~L~~L~L~~n~ 285 (386)
T 2ca6_A 270 KLENIGLQTLRLQYNE 285 (386)
T ss_dssp TCSSCCCCEEECCSSC
T ss_pred hccCCCeEEEECcCCc
Confidence 124556666676664
No 364
>2ast_B S-phase kinase-associated protein 2; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} SCOP: a.158.1.1 c.10.1.3 PDB: 2ass_B 1fqv_A* 1fs2_A
Probab=99.69 E-value=1.9e-18 Score=186.02 Aligned_cols=207 Identities=20% Similarity=0.200 Sum_probs=153.6
Q ss_pred CCceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCC--CCCCEEeCcCCCCCCCCcccccCCCCccEEEccCC
Q 003847 62 NPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMI--EFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNN 139 (791)
Q Consensus 62 ~~c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l--~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N 139 (791)
-|..|.++.|+ ...++.|+|+++++. +..+..+ ++|+.|+|++|.+.+..+. +.++++|++|+|++|
T Consensus 35 vc~~W~~~~~~-------~~~~~~l~l~~~~~~---~~~~~~~~~~~l~~L~l~~n~l~~~~~~-~~~~~~L~~L~L~~~ 103 (336)
T 2ast_B 35 VCKRWYRLASD-------ESLWQTLDLTGKNLH---PDVTGRLLSQGVIAFRCPRSFMDQPLAE-HFSPFRVQHMDLSNS 103 (336)
T ss_dssp SCHHHHHHHTC-------STTSSEEECTTCBCC---HHHHHHHHHTTCSEEECTTCEECSCCCS-CCCCBCCCEEECTTC
T ss_pred HHHHHHHHhcC-------chhheeeccccccCC---HHHHHhhhhccceEEEcCCccccccchh-hccCCCCCEEEccCC
Confidence 34578888875 234668888888776 4556666 7888899999888876664 567888999999988
Q ss_pred cCCCC-CccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCC-cCCCC-CCC---CCcccceeccccc-cccc
Q 003847 140 LISGH-LPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNN-YFSDG-LPS---KFNSVQVLDLSSN-LING 212 (791)
Q Consensus 140 ~l~~~-~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N-~l~~~-~p~---~l~~L~~L~ls~N-~l~~ 212 (791)
.+++. ++..+.++++|++|+|++|.+++..+..+..+++|++|+|++| .+++. ++. .+++|++|+|++| .+++
T Consensus 104 ~l~~~~~~~~~~~~~~L~~L~L~~~~l~~~~~~~l~~~~~L~~L~L~~~~~l~~~~l~~~~~~~~~L~~L~l~~~~~l~~ 183 (336)
T 2ast_B 104 VIEVSTLHGILSQCSKLQNLSLEGLRLSDPIVNTLAKNSNLVRLNLSGCSGFSEFALQTLLSSCSRLDELNLSWCFDFTE 183 (336)
T ss_dssp EECHHHHHHHHTTBCCCSEEECTTCBCCHHHHHHHTTCTTCSEEECTTCBSCCHHHHHHHHHHCTTCCEEECCCCTTCCH
T ss_pred CcCHHHHHHHHhhCCCCCEEeCcCcccCHHHHHHHhcCCCCCEEECCCCCCCCHHHHHHHHhcCCCCCEEcCCCCCCcCh
Confidence 88765 7788888888999999988888778888888888999999888 67752 333 3478888899888 8875
Q ss_pred c-CCCCcCC-c-cccEEEccCC--cCc-ccCchhHhhcCCCCcEEEcccCc-CcccCCCC-CcccccccccccCCC
Q 003847 213 S-LPPDIGG-Y-SLRYLNLSYN--RLS-GEIPPQFGEKIPVNATIDLSFNN-LTGEIPES-NVFMNQESSSFSGNL 280 (791)
Q Consensus 213 ~-~p~~~~~-~-~L~~L~l~~N--~l~-g~ip~~~~~~l~~l~~l~l~~N~-l~~~~p~~-~~~~~~~~~~~~~n~ 280 (791)
. ++..+.. . +|++|+|++| .++ +.+|..+.. +++|+.|+|++|. +++..+.. ..+.++..+.+.+|.
T Consensus 184 ~~~~~~~~~l~~~L~~L~l~~~~~~~~~~~l~~~~~~-~~~L~~L~l~~~~~l~~~~~~~l~~l~~L~~L~l~~~~ 258 (336)
T 2ast_B 184 KHVQVAVAHVSETITQLNLSGYRKNLQKSDLSTLVRR-CPNLVHLDLSDSVMLKNDCFQEFFQLNYLQHLSLSRCY 258 (336)
T ss_dssp HHHHHHHHHSCTTCCEEECCSCGGGSCHHHHHHHHHH-CTTCSEEECTTCTTCCGGGGGGGGGCTTCCEEECTTCT
T ss_pred HHHHHHHHhcccCCCEEEeCCCcccCCHHHHHHHHhh-CCCCCEEeCCCCCcCCHHHHHHHhCCCCCCEeeCCCCC
Confidence 3 4444443 5 7889999888 555 456666655 8888999998888 66544433 344566666676765
No 365
>1m9s_A Internalin B; cell invasion, GW domains, SH3 domains, signaling protein; 2.65A {Listeria monocytogenes} SCOP: b.1.18.15 b.34.11.1 b.34.11.1 b.34.11.1 c.10.2.1 PDB: 2y5q_A
Probab=99.69 E-value=3e-17 Score=189.62 Aligned_cols=186 Identities=20% Similarity=0.230 Sum_probs=152.0
Q ss_pred cEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCc
Q 003847 82 RVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLS 161 (791)
Q Consensus 82 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 161 (791)
.+..+.|..+.+...++ +..|++|+.|+|++|.|.. ++ .|..+++|+.|+|++|+|++..| +.+|++|+.|+|+
T Consensus 22 ~l~~l~l~~~~i~~~~~--~~~L~~L~~L~l~~n~i~~-l~-~l~~l~~L~~L~Ls~N~l~~~~~--l~~l~~L~~L~Ls 95 (605)
T 1m9s_A 22 ETIKDNLKKKSVTDAVT--QNELNSIDQIIANNSDIKS-VQ-GIQYLPNVTKLFLNGNKLTDIKP--LTNLKNLGWLFLD 95 (605)
T ss_dssp HHHHHHTTCSCTTSEEC--HHHHTTCCCCBCTTCCCCC-CT-TGGGCTTCCEEECTTSCCCCCGG--GGGCTTCCEEECC
T ss_pred HHHHHhccCCCcccccc--hhcCCCCCEEECcCCCCCC-Ch-HHccCCCCCEEEeeCCCCCCChh--hccCCCCCEEECc
Confidence 44556677777765544 5688999999999999984 44 58999999999999999996555 9999999999999
Q ss_pred CCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC-CCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCch
Q 003847 162 DNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP-SKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPP 239 (791)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p-~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~ 239 (791)
+|+|++ +| .+..|++|+.|+|++|+|++... ..+++|+.|+|++|+|++. ..+.. .+|+.|+|++|+|++..|
T Consensus 96 ~N~l~~-l~-~l~~l~~L~~L~Ls~N~l~~l~~l~~l~~L~~L~Ls~N~l~~l--~~l~~l~~L~~L~Ls~N~l~~~~~- 170 (605)
T 1m9s_A 96 ENKIKD-LS-SLKDLKKLKSLSLEHNGISDINGLVHLPQLESLYLGNNKITDI--TVLSRLTKLDTLSLEDNQISDIVP- 170 (605)
T ss_dssp SSCCCC-CT-TSTTCTTCCEEECTTSCCCCCGGGGGCTTCSEEECCSSCCCCC--GGGGSCTTCSEEECCSSCCCCCGG-
T ss_pred CCCCCC-Ch-hhccCCCCCEEEecCCCCCCCccccCCCccCEEECCCCccCCc--hhhcccCCCCEEECcCCcCCCchh-
Confidence 999995 44 79999999999999999998421 2358999999999999964 34444 689999999999996655
Q ss_pred hHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCC
Q 003847 240 QFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLD 281 (791)
Q Consensus 240 ~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~ 281 (791)
+.. +++|+.|+|++|+|++. |....+.++..+.+.+|+.
T Consensus 171 -l~~-l~~L~~L~Ls~N~i~~l-~~l~~l~~L~~L~L~~N~l 209 (605)
T 1m9s_A 171 -LAG-LTKLQNLYLSKNHISDL-RALAGLKNLDVLELFSQEC 209 (605)
T ss_dssp -GTT-CTTCCEEECCSSCCCBC-GGGTTCTTCSEEECCSEEE
T ss_pred -hcc-CCCCCEEECcCCCCCCC-hHHccCCCCCEEEccCCcC
Confidence 544 99999999999999975 5555666777777777754
No 366
>3goz_A Leucine-rich repeat-containing protein; LEGL7, NESG, LGR148, structural genomics, PSI-2, protein structure initiative; 2.10A {Legionella pneumophila subsp}
Probab=99.68 E-value=2.7e-18 Score=186.95 Aligned_cols=196 Identities=23% Similarity=0.191 Sum_probs=155.8
Q ss_pred EEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCc----ccccCCC-CccEEEccCCcCCCCCccccCCC-----CC
Q 003847 85 GLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLS----FSLFNAS-QLRNLDLSNNLISGHLPETMGSL-----HN 154 (791)
Q Consensus 85 ~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p----~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l-----~~ 154 (791)
.+.|+.|+++|.+|..+...++|++|+|++|.|++..+ ..|.+++ +|++|+|++|+|++..+..|..+ ++
T Consensus 2 ~~~ls~n~~~~~~~~~~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~ 81 (362)
T 3goz_A 2 NYKLTLHPGSNPVEEFTSIPHGVTSLDLSLNNLYSISTVELIQAFANTPASVTSLNLSGNSLGFKNSDELVQILAAIPAN 81 (362)
T ss_dssp EEECCCCTTCCHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTCCTTCCEEECCSSCGGGSCHHHHHHHHHTSCTT
T ss_pred ccccccccchHHHHHHHhCCCCceEEEccCCCCChHHHHHHHHHHHhCCCceeEEECcCCCCCHHHHHHHHHHHhccCCC
Confidence 46889999999999988888889999999999997777 7788898 99999999999998888877775 99
Q ss_pred CCEEeCcCCcCCCCCcccc----CCC-CCCCEEeCCCCcCCCCCCCCC--------cccceeccccccccccCCCCc---
Q 003847 155 LQLLNLSDNALAGKLPVSL----TTL-QSLTIVSLKNNYFSDGLPSKF--------NSVQVLDLSSNLINGSLPPDI--- 218 (791)
Q Consensus 155 L~~L~ls~N~l~~~~p~~~----~~l-~~L~~L~L~~N~l~~~~p~~l--------~~L~~L~ls~N~l~~~~p~~~--- 218 (791)
|++|+|++|++++..+..+ ..+ ++|++|+|++|+|++..+..+ ++|++|+|++|+|+......+
T Consensus 82 L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~l~~~~~~~l~~~ 161 (362)
T 3goz_A 82 VTSLNLSGNFLSYKSSDELVKTLAAIPFTITVLDLGWNDFSSKSSSEFKQAFSNLPASITSLNLRGNDLGIKSSDELIQI 161 (362)
T ss_dssp CCEEECCSSCGGGSCHHHHHHHHHTSCTTCCEEECCSSCGGGSCHHHHHHHHTTSCTTCCEEECTTSCGGGSCHHHHHHH
T ss_pred ccEEECcCCcCChHHHHHHHHHHHhCCCCccEEECcCCcCCcHHHHHHHHHHHhCCCceeEEEccCCcCCHHHHHHHHHH
Confidence 9999999999997777644 444 899999999999988665432 489999999999985443333
Q ss_pred -CC--ccccEEEccCCcCcccCchhHhh---cC-CCCcEEEcccCcCcccC----CCCC-c-ccccccccccCCC
Q 003847 219 -GG--YSLRYLNLSYNRLSGEIPPQFGE---KI-PVNATIDLSFNNLTGEI----PESN-V-FMNQESSSFSGNL 280 (791)
Q Consensus 219 -~~--~~L~~L~l~~N~l~g~ip~~~~~---~l-~~l~~l~l~~N~l~~~~----p~~~-~-~~~~~~~~~~~n~ 280 (791)
.. .+|++|+|++|+|++..+..+.. .+ ++|++|||++|+++... +... . ..++..+.+.+|.
T Consensus 162 l~~~~~~L~~L~Ls~n~l~~~~~~~l~~~l~~~~~~L~~L~Ls~N~i~~~~~~~l~~~l~~~~~~L~~L~Ls~N~ 236 (362)
T 3goz_A 162 LAAIPANVNSLNLRGNNLASKNCAELAKFLASIPASVTSLDLSANLLGLKSYAELAYIFSSIPNHVVSLNLCLNC 236 (362)
T ss_dssp HHTSCTTCCEEECTTSCGGGSCHHHHHHHHHTSCTTCCEEECTTSCGGGSCHHHHHHHHHHSCTTCCEEECCSSC
T ss_pred HhcCCccccEeeecCCCCchhhHHHHHHHHHhCCCCCCEEECCCCCCChhHHHHHHHHHhcCCCCceEEECcCCC
Confidence 22 38999999999999777765543 24 59999999999998632 2211 1 1255666666663
No 367
>1xeu_A Internalin C; cellular invasion, leucine-rich repeat, cell invasion; 2.05A {Listeria monocytogenes}
Probab=99.68 E-value=2.7e-17 Score=170.43 Aligned_cols=169 Identities=21% Similarity=0.199 Sum_probs=141.2
Q ss_pred CCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEE
Q 003847 103 MIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIV 182 (791)
Q Consensus 103 ~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 182 (791)
.+.+|..|+|++|.+++ ++ .+..+++|++|+|++|.|+ .+| .+..+++|+.|+|++|+|++..+ +.++++|+.|
T Consensus 17 ~l~~l~~l~l~~~~i~~-~~-~~~~l~~L~~L~l~~n~i~-~l~-~l~~l~~L~~L~L~~N~i~~~~~--l~~l~~L~~L 90 (263)
T 1xeu_A 17 GLANAVKQNLGKQSVTD-LV-SQKELSGVQNFNGDNSNIQ-SLA-GMQFFTNLKELHLSHNQISDLSP--LKDLTKLEEL 90 (263)
T ss_dssp HHHHHHHHHHTCSCTTS-EE-CHHHHTTCSEEECTTSCCC-CCT-TGGGCTTCCEEECCSSCCCCCGG--GTTCSSCCEE
T ss_pred HHHHHHHHHhcCCCccc-cc-chhhcCcCcEEECcCCCcc-cch-HHhhCCCCCEEECCCCccCCChh--hccCCCCCEE
Confidence 46778889999999984 44 6889999999999999998 566 68999999999999999996544 9999999999
Q ss_pred eCCCCcCCCCCCCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCccc
Q 003847 183 SLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGE 261 (791)
Q Consensus 183 ~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~ 261 (791)
+|++|++++..+...++|+.|+|++|+|++ ++ .+.. .+|++|+|++|+|+ .+| .+.. +++|+.|+|++|++++.
T Consensus 91 ~L~~N~l~~l~~~~~~~L~~L~L~~N~l~~-~~-~l~~l~~L~~L~Ls~N~i~-~~~-~l~~-l~~L~~L~L~~N~i~~~ 165 (263)
T 1xeu_A 91 SVNRNRLKNLNGIPSACLSRLFLDNNELRD-TD-SLIHLKNLEILSIRNNKLK-SIV-MLGF-LSKLEVLDLHGNEITNT 165 (263)
T ss_dssp ECCSSCCSCCTTCCCSSCCEEECCSSCCSB-SG-GGTTCTTCCEEECTTSCCC-BCG-GGGG-CTTCCEEECTTSCCCBC
T ss_pred ECCCCccCCcCccccCcccEEEccCCccCC-Ch-hhcCcccccEEECCCCcCC-CCh-HHcc-CCCCCEEECCCCcCcch
Confidence 999999998544334899999999999995 44 3544 68999999999999 555 4555 99999999999999987
Q ss_pred CCCCCcccccccccccCCCCCC
Q 003847 262 IPESNVFMNQESSSFSGNLDLC 283 (791)
Q Consensus 262 ~p~~~~~~~~~~~~~~~n~~lc 283 (791)
+....+.++..+.+.+|+..|
T Consensus 166 -~~l~~l~~L~~L~l~~N~~~~ 186 (263)
T 1xeu_A 166 -GGLTRLKKVNWIDLTGQKCVN 186 (263)
T ss_dssp -TTSTTCCCCCEEEEEEEEEEC
T ss_pred -HHhccCCCCCEEeCCCCcccC
Confidence 555566677778888887554
No 368
>4ay9_X Follicle-stimulating hormone receptor; hormone-receptor complex, leucine-rich repeats, LRR, GPCR; HET: TYS NAG; 2.50A {Homo sapiens} PDB: 1xwd_C*
Probab=99.68 E-value=8.5e-17 Score=174.22 Aligned_cols=212 Identities=17% Similarity=0.114 Sum_probs=168.0
Q ss_pred eeeeeCCCCCCCCCCcEEEEEcCCCCCccCCC-cCCCCCCCCCE-EeCcCCCCCCCCcccccCCCCccEEEccCCcCCCC
Q 003847 67 NGVTCASPGEGNNDSRVIGLALPNSQLLGSIP-ADLGMIEFLQY-LDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGH 144 (791)
Q Consensus 67 ~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~-~~~~~l~~L~~-L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~ 144 (791)
+.++-..++.|.++.+++.|+|++|++.+.+| ..|.+|++|+. +++++|+|+...|..|.++++|++|+|++|+|++.
T Consensus 40 N~i~~i~~~~f~~l~~L~~L~Ls~N~i~~~i~~~~f~~L~~l~~~l~~~~N~l~~l~~~~f~~l~~L~~L~l~~n~l~~~ 119 (350)
T 4ay9_X 40 TKLRVIQKGAFSGFGDLEKIEISQNDVLEVIEADVFSNLPKLHEIRIEKANNLLYINPEAFQNLPNLQYLLISNTGIKHL 119 (350)
T ss_dssp CCCSEECTTSSTTCTTCCEEEEECCTTCCEECTTSBCSCTTCCEEEEEEETTCCEECTTSBCCCTTCCEEEEEEECCSSC
T ss_pred CcCCCcCHHHHcCCCCCCEEECcCCCCCCccChhHhhcchhhhhhhcccCCcccccCchhhhhccccccccccccccccC
Confidence 44554455668889999999999999987766 46899999875 67778999988889999999999999999999977
Q ss_pred CccccCCCCCCCEEeCcC-CcCCCCCccccCCCC-CCCEEeCCCCcCCCCCCCCC--cccceecccc-ccccccCCC-Cc
Q 003847 145 LPETMGSLHNLQLLNLSD-NALAGKLPVSLTTLQ-SLTIVSLKNNYFSDGLPSKF--NSVQVLDLSS-NLINGSLPP-DI 218 (791)
Q Consensus 145 ~p~~~~~l~~L~~L~ls~-N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~l--~~L~~L~ls~-N~l~~~~p~-~~ 218 (791)
.+..+....++..|++++ |++....+..|..+. .|+.|+|++|+|+...+..| .+|+.|++++ |.++ .+|. .|
T Consensus 120 ~~~~~~~~~~l~~l~l~~~~~i~~l~~~~f~~~~~~l~~L~L~~N~i~~i~~~~f~~~~L~~l~l~~~n~l~-~i~~~~f 198 (350)
T 4ay9_X 120 PDVHKIHSLQKVLLDIQDNINIHTIERNSFVGLSFESVILWLNKNGIQEIHNSAFNGTQLDELNLSDNNNLE-ELPNDVF 198 (350)
T ss_dssp CCCTTCCBSSCEEEEEESCTTCCEECTTSSTTSBSSCEEEECCSSCCCEECTTSSTTEEEEEEECTTCTTCC-CCCTTTT
T ss_pred CchhhcccchhhhhhhccccccccccccchhhcchhhhhhccccccccCCChhhccccchhHHhhccCCccc-CCCHHHh
Confidence 777788888899999966 678866667788775 68999999999998666665 6799999985 6676 5654 55
Q ss_pred CC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCCCCCC
Q 003847 219 GG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNLDLCG 284 (791)
Q Consensus 219 ~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~ 284 (791)
.. .+|++|||++|+|+ .+|... +.+|+.|.+.+++--..+|....+.++....+ .|++.|.
T Consensus 199 ~~l~~L~~LdLs~N~l~-~lp~~~---~~~L~~L~~l~~~~l~~lP~l~~l~~L~~l~l-~~~~~c~ 260 (350)
T 4ay9_X 199 HGASGPVILDISRTRIH-SLPSYG---LENLKKLRARSTYNLKKLPTLEKLVALMEASL-TYPSHCC 260 (350)
T ss_dssp TTEECCSEEECTTSCCC-CCCSSS---CTTCCEEECTTCTTCCCCCCTTTCCSCCEEEC-SCHHHHH
T ss_pred ccCcccchhhcCCCCcC-ccChhh---hccchHhhhccCCCcCcCCCchhCcChhhCcC-CCCcccc
Confidence 65 58999999999999 888765 56777777766655557787666666655544 5677774
No 369
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.67 E-value=3.2e-16 Score=152.06 Aligned_cols=134 Identities=25% Similarity=0.281 Sum_probs=95.4
Q ss_pred CCceeeeeeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcC
Q 003847 62 NPCSWNGVTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLI 141 (791)
Q Consensus 62 ~~c~w~gv~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l 141 (791)
..|+|.++.|. +++++ .+|..+ .++|+.|+|++|+|++..+..|.++++|++|+|++|+|
T Consensus 5 C~C~~~~l~~~-----------------~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l 64 (177)
T 2o6r_A 5 CSCSGTEIRCN-----------------SKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQI 64 (177)
T ss_dssp CEEETTEEECC-----------------SSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCC
T ss_pred CEeCCCEEEec-----------------CCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcc
Confidence 34789888886 33443 233332 25778888888888766666677788888888888888
Q ss_pred CCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCC---CcccceeccccccccccCC
Q 003847 142 SGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSK---FNSVQVLDLSSNLINGSLP 215 (791)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---l~~L~~L~ls~N~l~~~~p 215 (791)
++..+..|.++++|++|+|++|+|++..+..|..+++|++|+|++|+|++..+.. +++|++|+|++|.+++..|
T Consensus 65 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 65 QSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp CCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred eEeChhHccCCCccCEEECCCCCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 7666666777888888888888888666666777888888888888887655543 3677888888888775443
No 370
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.67 E-value=1.4e-16 Score=153.06 Aligned_cols=130 Identities=28% Similarity=0.220 Sum_probs=100.1
Q ss_pred CCcEEEEEcCCCCCc-cCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEE
Q 003847 80 DSRVIGLALPNSQLL-GSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLL 158 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 158 (791)
..+++.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..|..+++|++|+|++|+|++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 457888888888887 77787788888888888888888865 677888888888888888887777777778888888
Q ss_pred eCcCCcCCCCC-ccccCCCCCCCEEeCCCCcCCCCCC------CCCcccceecccccccc
Q 003847 159 NLSDNALAGKL-PVSLTTLQSLTIVSLKNNYFSDGLP------SKFNSVQVLDLSSNLIN 211 (791)
Q Consensus 159 ~ls~N~l~~~~-p~~~~~l~~L~~L~L~~N~l~~~~p------~~l~~L~~L~ls~N~l~ 211 (791)
+|++|+|++.. +..+..+++|+.|+|++|.+++..+ ..+++|++|++++|.+.
T Consensus 101 ~Ls~N~l~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~~n~~~ 160 (168)
T 2ell_A 101 NLSGNKLKDISTLEPLKKLECLKSLDLFNCEVTNLNDYRESVFKLLPQLTYLDGYDREDQ 160 (168)
T ss_dssp ECBSSSCCSSGGGGGGSSCSCCCEEECCSSGGGTSTTHHHHHHTTCSSCCEETTEETTSC
T ss_pred eccCCccCcchhHHHHhcCCCCCEEEeeCCcCcchHHHHHHHHHhCccCcEecCCCCChh
Confidence 88888888532 2678888888888888888876544 13466777777777665
No 371
>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A
Probab=99.66 E-value=2.6e-17 Score=176.59 Aligned_cols=138 Identities=11% Similarity=0.083 Sum_probs=99.1
Q ss_pred hhcceeccccCceEEEEEEeCCCcEEEEEEcCCCch--------------hhHH--------HHHHHHHHHhccCCCCcc
Q 003847 477 KASAYILGASGSSIMYKAVLEDGTALAVRRIGENSV--------------DRFR--------DFETQVRVIAKLVHPNLV 534 (791)
Q Consensus 477 ~~~~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~--------------~~~~--------~~~~E~~~l~~l~H~nIv 534 (791)
+.....||.|++|.||+|...+|+.||||+++.... .... ...+|...|.++.+.++.
T Consensus 97 Y~I~~~IG~Gk~a~VY~a~d~~G~~vAvKi~r~~~~sfr~v~~~r~~~~~~~~~~~~~~~rl~A~kE~~nL~rL~~~gv~ 176 (397)
T 4gyi_A 97 YSVGSRIGVGKESDIMIVADEKGKQKVLKIHRLGRISFRTVKANRDYLRNRSTGSWMYLSRLAAIKEFAFMKALYEEGFP 176 (397)
T ss_dssp SEEEEEEEECSSEEEEEEECTTCCEEEEEEECTTEECCCCCC--CEECTTSCHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred EEecCEeeeCCceEEEEEECCCCCEEEEEEEecccccHHHHHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 334678999999999999988999999998753210 0001 124566777777544432
Q ss_pred ceeeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeEecCCC-
Q 003847 535 RIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVLLGNDM- 613 (791)
Q Consensus 535 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NILl~~~~- 613 (791)
-..- +.. ...+|||||++|++|.++.. . +....++.|++.+|.|||+.|||||||||.|||+++++
T Consensus 177 vp~p-~~~-~~~~LVME~i~G~~L~~l~~---------~--~~~~~l~~qll~~l~~lH~~gIVHrDLKp~NILl~~dgd 243 (397)
T 4gyi_A 177 VPEP-IAQ-SRHTIVMSLVDALPMRQVSS---------V--PDPASLYADLIALILRLAKHGLIHGDFNEFNILIREEKD 243 (397)
T ss_dssp CCCE-EEE-ETTEEEEECCSCEEGGGCCC---------C--SCHHHHHHHHHHHHHHHHHTTEECSCCSTTSEEEEEEEC
T ss_pred CCee-eec-cCceEEEEecCCccHhhhcc---------c--HHHHHHHHHHHHHHHHHHHCCCcCCCCCHHHEEEeCCCC
Confidence 2111 111 23479999999988865321 1 23457889999999999999999999999999998776
Q ss_pred ---------CeEEeccCcccccC
Q 003847 614 ---------EPKIGDFGLERLVT 627 (791)
Q Consensus 614 ---------~~kL~DFGla~~~~ 627 (791)
.+.|+||+.+....
T Consensus 244 ~~d~~~~~~~~~iID~~Q~V~~~ 266 (397)
T 4gyi_A 244 AEDPSSITLTPIIIXFPQMVSMD 266 (397)
T ss_dssp SSCTTSEEEEEEECCCTTCEETT
T ss_pred cccccccccceEEEEeCCcccCC
Confidence 38999999876543
No 372
>2ell_A Acidic leucine-rich nuclear phosphoprotein 32 FAM B; phapi2 protein, silver-stainable protein SSP29, acidic prote in leucines, structural genomics; NMR {Homo sapiens} PDB: 2rr6_A 2jqd_A
Probab=99.64 E-value=2e-16 Score=152.04 Aligned_cols=134 Identities=21% Similarity=0.151 Sum_probs=100.4
Q ss_pred CCCCCEEeCcCCCCC-CCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEE
Q 003847 104 IEFLQYLDLSNNSLN-GSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIV 182 (791)
Q Consensus 104 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 182 (791)
.++|+.|+|++|+|+ +.+|..+..+++|++|+|++|.|++. ..+..+++|++|+|++|++++.+|..+.++++|++|
T Consensus 23 ~~~L~~L~l~~n~l~~~~i~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 100 (168)
T 2ell_A 23 PAAVRELVLDNCKSNDGKIEGLTAEFVNLEFLSLINVGLISV--SNLPKLPKLKKLELSENRIFGGLDMLAEKLPNLTHL 100 (168)
T ss_dssp TTSCSEEECCSCBCBTTBCSSCCGGGGGCCEEEEESSCCCCC--SSCCCCSSCCEEEEESCCCCSCCCHHHHHCTTCCEE
T ss_pred cccCCEEECCCCCCChhhHHHHHHhCCCCCEEeCcCCCCCCh--hhhccCCCCCEEECcCCcCchHHHHHHhhCCCCCEE
Confidence 478899999999998 77888888899999999999999865 778889999999999999987788877778888888
Q ss_pred eCCCCcCCCCCCCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCch---hHhhcCCCCcEEEcccCcC
Q 003847 183 SLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPP---QFGEKIPVNATIDLSFNNL 258 (791)
Q Consensus 183 ~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~---~~~~~l~~l~~l~l~~N~l 258 (791)
+|++|+|++... +..+.. .+|++|+|++|.++ .+|. ..+..+++|++|++++|.+
T Consensus 101 ~Ls~N~l~~~~~--------------------~~~l~~l~~L~~L~l~~N~l~-~~~~~~~~~~~~l~~L~~L~l~~n~~ 159 (168)
T 2ell_A 101 NLSGNKLKDIST--------------------LEPLKKLECLKSLDLFNCEVT-NLNDYRESVFKLLPQLTYLDGYDRED 159 (168)
T ss_dssp ECBSSSCCSSGG--------------------GGGGSSCSCCCEEECCSSGGG-TSTTHHHHHHTTCSSCCEETTEETTS
T ss_pred eccCCccCcchh--------------------HHHHhcCCCCCEEEeeCCcCc-chHHHHHHHHHhCccCcEecCCCCCh
Confidence 888888876321 012222 35666666666666 3443 2333477788888888777
Q ss_pred cc
Q 003847 259 TG 260 (791)
Q Consensus 259 ~~ 260 (791)
..
T Consensus 160 ~~ 161 (168)
T 2ell_A 160 QE 161 (168)
T ss_dssp CB
T ss_pred hh
Confidence 63
No 373
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.64 E-value=1.4e-15 Score=149.66 Aligned_cols=107 Identities=28% Similarity=0.260 Sum_probs=89.6
Q ss_pred EEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCc
Q 003847 85 GLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNA 164 (791)
Q Consensus 85 ~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 164 (791)
.+++++|+|+ .+|..+. ++|++|+|++|+|+ .+|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 14 ~l~~~~~~l~-~ip~~~~--~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls~N~ 89 (193)
T 2wfh_A 14 VVRCSNKGLK-VLPKGIP--RDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILSYNR 89 (193)
T ss_dssp EEECTTSCCS-SCCSCCC--TTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEcCCCCCC-cCCCCCC--CCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECCCCc
Confidence 4556677776 4565543 68999999999998 677889999999999999999998888889999999999999999
Q ss_pred CCCCCccccCCCCCCCEEeCCCCcCCCCCCC
Q 003847 165 LAGKLPVSLTTLQSLTIVSLKNNYFSDGLPS 195 (791)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~ 195 (791)
|++..|..|.++++|+.|+|++|+|+...+.
T Consensus 90 l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~ 120 (193)
T 2wfh_A 90 LRCIPPRTFDGLKSLRLLSLHGNDISVVPEG 120 (193)
T ss_dssp CCBCCTTTTTTCTTCCEEECCSSCCCBCCTT
T ss_pred cCEeCHHHhCCCCCCCEEECCCCCCCeeChh
Confidence 9988888899999999999998888864443
No 374
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.64 E-value=7.3e-19 Score=201.88 Aligned_cols=176 Identities=21% Similarity=0.216 Sum_probs=126.4
Q ss_pred cEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCC-------------CCCCCcccccCCCCccEEE-ccCCcCCCCCcc
Q 003847 82 RVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNS-------------LNGSLSFSLFNASQLRNLD-LSNNLISGHLPE 147 (791)
Q Consensus 82 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~-------------l~~~~p~~~~~l~~L~~L~-L~~N~l~~~~p~ 147 (791)
+++.|+|++|+|. .+|..+++|++|+.|++++|. +.+.+|..+.++++|+.|+ ++.|.+. .++.
T Consensus 350 ~L~~L~Ls~n~L~-~Lp~~i~~l~~L~~L~l~~n~~l~~l~~ll~~~~~~~~~~~~l~~l~~L~~L~~l~~n~~~-~L~~ 427 (567)
T 1dce_A 350 QLFRCELSVEKST-VLQSELESCKELQELEPENKWCLLTIILLMRALDPLLYEKETLQYFSTLKAVDPMRAAYLD-DLRS 427 (567)
T ss_dssp TSSSCCCCHHHHH-HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHCTGGGHHHHHHHHHHHHHHCGGGHHHHH-HHHH
T ss_pred cceeccCChhhHH-hhHHHHHHHHHHHHhccccchhhhhHHHHHHhcccccCCHHHHHHHHhcccCcchhhcccc-hhhh
Confidence 3445556666664 456666666666666665553 4445555566666666665 4444322 1110
Q ss_pred ------ccCC--CCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCC
Q 003847 148 ------TMGS--LHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPP 216 (791)
Q Consensus 148 ------~~~~--l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~ 216 (791)
.+.. ...|+.|+|++|+|++ +|. |.++++|+.|+|++|+|+ .+|..| ++|+.|+|++|+|++ +|
T Consensus 428 l~l~~n~i~~l~~~~L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp- 502 (567)
T 1dce_A 428 KFLLENSVLKMEYADVRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD- 502 (567)
T ss_dssp HHHHHHHHHHHHHTTCSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-
T ss_pred hhhhcccccccCccCceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-
Confidence 0100 1258899999999995 676 999999999999999999 567655 789999999999996 67
Q ss_pred CcCC-ccccEEEccCCcCcccC-chhHhhcCCCCcEEEcccCcCcccCCCC
Q 003847 217 DIGG-YSLRYLNLSYNRLSGEI-PPQFGEKIPVNATIDLSFNNLTGEIPES 265 (791)
Q Consensus 217 ~~~~-~~L~~L~l~~N~l~g~i-p~~~~~~l~~l~~l~l~~N~l~~~~p~~ 265 (791)
.++. .+|++|+|++|+|++.+ |..+.. +++|+.|+|++|+|++.+|..
T Consensus 503 ~l~~l~~L~~L~Ls~N~l~~~~~p~~l~~-l~~L~~L~L~~N~l~~~~~~~ 552 (567)
T 1dce_A 503 GVANLPRLQELLLCNNRLQQSAAIQPLVS-CPRLVLLNLQGNSLCQEEGIQ 552 (567)
T ss_dssp GGTTCSSCCEEECCSSCCCSSSTTGGGGG-CTTCCEEECTTSGGGGSSSCT
T ss_pred ccCCCCCCcEEECCCCCCCCCCCcHHHhc-CCCCCEEEecCCcCCCCccHH
Confidence 6655 58999999999999766 888877 999999999999999887754
No 375
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.63 E-value=2.8e-16 Score=147.73 Aligned_cols=125 Identities=28% Similarity=0.260 Sum_probs=100.0
Q ss_pred CCcEEEEEcCCCCCc-cCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEE
Q 003847 80 DSRVIGLALPNSQLL-GSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLL 158 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 158 (791)
..+++.|+|++|+++ +.+|..+..+++|++|+|++|.|++. ..+.++++|++|+|++|+|++.+|..+.++++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 457888889998887 78888888888899999999888865 678888888889998888887788888888888888
Q ss_pred eCcCCcCCCC-CccccCCCCCCCEEeCCCCcCCCCCC---CC---Ccccceeccc
Q 003847 159 NLSDNALAGK-LPVSLTTLQSLTIVSLKNNYFSDGLP---SK---FNSVQVLDLS 206 (791)
Q Consensus 159 ~ls~N~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p---~~---l~~L~~L~ls 206 (791)
+|++|++++. .+..+..+++|++|+|++|.+++..+ .. +++|+.||++
T Consensus 94 ~ls~N~i~~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~ 148 (149)
T 2je0_A 94 NLSGNKIKDLSTIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGY 148 (149)
T ss_dssp ECTTSCCCSHHHHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTB
T ss_pred ECCCCcCCChHHHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCC
Confidence 8888888853 34778888888888888888887544 22 3567776665
No 376
>2o6r_A Variable lymphocyte receptor B; leucine-rich repeat protein, LRR, immune system; 2.30A {Eptatretus burgeri}
Probab=99.62 E-value=3.2e-15 Score=144.92 Aligned_cols=129 Identities=21% Similarity=0.214 Sum_probs=107.3
Q ss_pred CCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCC
Q 003847 107 LQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKN 186 (791)
Q Consensus 107 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~ 186 (791)
.+.+++++|+++ .+|..+ .++|++|+|++|+|++..+..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 9 ~~~l~~~~~~l~-~~p~~~--~~~l~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~l~~ 85 (177)
T 2o6r_A 9 GTEIRCNSKGLT-SVPTGI--PSSATRLELESNKLQSLPHGVFDKLTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHE 85 (177)
T ss_dssp TTEEECCSSCCS-SCCTTC--CTTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEecCCCCc-cCCCCC--CCCCcEEEeCCCcccEeCHHHhcCcccccEEECCCCcceEeChhHccCCCccCEEECCC
Confidence 478999999998 455444 36899999999999977777789999999999999999977777789999999999999
Q ss_pred CcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCc
Q 003847 187 NYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIP 238 (791)
Q Consensus 187 N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip 238 (791)
|+|++..+..| ++|++|+|++|+|++..+..+.. .+|++|+|++|.+++..|
T Consensus 86 N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~~N~~~~~~~ 141 (177)
T 2o6r_A 86 NKLQSLPNGVFDKLTQLKELALDTNQLKSVPDGIFDRLTSLQKIWLHTNPWDCSCP 141 (177)
T ss_dssp SCCCCCCTTTTTTCTTCCEEECCSSCCSCCCTTTTTTCTTCCEEECCSSCBCCCHH
T ss_pred CCccccCHHHhhCCcccCEEECcCCcceEeCHHHhcCCcccCEEEecCCCeeccCc
Confidence 99998776544 78999999999998655555554 589999999999997766
No 377
>2wfh_A SLIT homolog 2 protein C-product; developmental protein, neurogenesis, splicing, glycoprotein, leucine-rich repeat, disulfide bond, differentiation; 1.80A {Homo sapiens}
Probab=99.61 E-value=2.6e-15 Score=147.78 Aligned_cols=129 Identities=27% Similarity=0.318 Sum_probs=112.6
Q ss_pred CCceeeeeeeCCCCC----CCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEcc
Q 003847 62 NPCSWNGVTCASPGE----GNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLS 137 (791)
Q Consensus 62 ~~c~w~gv~C~~~~~----~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~ 137 (791)
..|.|..+.|+..+- ..-...++.|+|++|+|+ .+|..|..+++|+.|+|++|+|++..+..|.++++|++|+|+
T Consensus 8 C~C~~~~l~~~~~~l~~ip~~~~~~l~~L~L~~n~i~-~ip~~~~~l~~L~~L~Ls~N~i~~i~~~~f~~l~~L~~L~Ls 86 (193)
T 2wfh_A 8 CTCLDTVVRCSNKGLKVLPKGIPRDVTELYLDGNQFT-LVPKELSNYKHLTLIDLSNNRISTLSNQSFSNMTQLLTLILS 86 (193)
T ss_dssp CEEETTEEECTTSCCSSCCSCCCTTCCEEECCSSCCC-SCCGGGGGCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECC
T ss_pred CEeCCCEEEcCCCCCCcCCCCCCCCCCEEECCCCcCc-hhHHHhhcccCCCEEECCCCcCCEeCHhHccCCCCCCEEECC
Confidence 347788888863210 112357999999999998 677899999999999999999998888999999999999999
Q ss_pred CCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCC
Q 003847 138 NNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSD 191 (791)
Q Consensus 138 ~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 191 (791)
+|+|++..|..|.++++|+.|+|++|+|++..+..|..+++|+.|+|++|.+..
T Consensus 87 ~N~l~~i~~~~f~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~~~C 140 (193)
T 2wfh_A 87 YNRLRCIPPRTFDGLKSLRLLSLHGNDISVVPEGAFNDLSALSHLAIGANPLYC 140 (193)
T ss_dssp SSCCCBCCTTTTTTCTTCCEEECCSSCCCBCCTTTTTTCTTCCEEECCSSCEEC
T ss_pred CCccCEeCHHHhCCCCCCCEEECCCCCCCeeChhhhhcCccccEEEeCCCCeec
Confidence 999998888899999999999999999997777789999999999999998864
No 378
>2je0_A Acidic leucine-rich nuclear phosphoprotein 32 FAM member A; nuclear protein; 2.40A {Homo sapiens} PDB: 2je1_A
Probab=99.59 E-value=9.8e-16 Score=144.03 Aligned_cols=130 Identities=22% Similarity=0.146 Sum_probs=90.1
Q ss_pred CCCCCEEeCcCCCCC-CCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEE
Q 003847 104 IEFLQYLDLSNNSLN-GSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIV 182 (791)
Q Consensus 104 l~~L~~L~L~~N~l~-~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L 182 (791)
.++|+.|+|++|.++ +.+|..+..+++|++|+|++|.|++. ..++++++|++|+|++|++++.+|..+..+++|++|
T Consensus 16 ~~~l~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~n~l~~~--~~~~~l~~L~~L~Ls~n~i~~~~~~~~~~l~~L~~L 93 (149)
T 2je0_A 16 PSDVKELVLDNSRSNEGKLEGLTDEFEELEFLSTINVGLTSI--ANLPKLNKLKKLELSDNRVSGGLEVLAEKCPNLTHL 93 (149)
T ss_dssp GGGCSEEECTTCBCBTTBCCSCCTTCTTCCEEECTTSCCCCC--TTCCCCTTCCEEECCSSCCCSCTHHHHHHCTTCCEE
T ss_pred CccCeEEEccCCcCChhHHHHHHhhcCCCcEEECcCCCCCCc--hhhhcCCCCCEEECCCCcccchHHHHhhhCCCCCEE
Confidence 367788888888887 67777777888888888888888754 667778888888888888876677777777777777
Q ss_pred eCCCCcCCCCCCCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCc--hhHhhcCCCCcEEEccc
Q 003847 183 SLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIP--PQFGEKIPVNATIDLSF 255 (791)
Q Consensus 183 ~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip--~~~~~~l~~l~~l~l~~ 255 (791)
+|++|++++.. .+..+.. .+|++|++++|.+++..+ ...+..+++|++||+++
T Consensus 94 ~ls~N~i~~~~--------------------~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~~l~~L~~L~l~d 149 (149)
T 2je0_A 94 NLSGNKIKDLS--------------------TIEPLKKLENLKSLDLFNCEVTNLNDYRENVFKLLPQLTYLDGYD 149 (149)
T ss_dssp ECTTSCCCSHH--------------------HHGGGGGCTTCCEEECTTCGGGGSTTHHHHHHHHCTTCCEETTBC
T ss_pred ECCCCcCCChH--------------------HHHHHhhCCCCCEEeCcCCcccchHHHHHHHHHHCCCcccccCCC
Confidence 77777776521 1122333 367777777777774333 13334488888888764
No 379
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.56 E-value=5.9e-17 Score=182.39 Aligned_cols=201 Identities=18% Similarity=0.113 Sum_probs=133.0
Q ss_pred CCcEEEEEcCCCCCccCCCcCCC-----CCCCCCEEeCcCCCCCCC----CcccccCCCCccEEEccCCcCCCCC-----
Q 003847 80 DSRVIGLALPNSQLLGSIPADLG-----MIEFLQYLDLSNNSLNGS----LSFSLFNASQLRNLDLSNNLISGHL----- 145 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~-----~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~----- 145 (791)
..+++.|+|++|.+....+..+. .+++|++|+|++|.+++. ++..+..+++|++|+|++|.|++..
T Consensus 169 ~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~~~~~~~l~ 248 (461)
T 1z7x_W 169 KPDFKELTVSNNDINEAGVRVLCQGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLGDVGMAELC 248 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHH
T ss_pred CCCCCEEECcCCCcchHHHHHHHHHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCChHHHHHHH
Confidence 35788888888887655444443 256888888888888764 4666777888888888888876432
Q ss_pred ccccCCCCCCCEEeCcCCcCCCC----CccccCCCCCCCEEeCCCCcCCCCCCCC--------Ccccceecccccccccc
Q 003847 146 PETMGSLHNLQLLNLSDNALAGK----LPVSLTTLQSLTIVSLKNNYFSDGLPSK--------FNSVQVLDLSSNLINGS 213 (791)
Q Consensus 146 p~~~~~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~--------l~~L~~L~ls~N~l~~~ 213 (791)
+..+..+++|++|+|++|+++.. ++..+..+++|++|+|++|.+++..+.. .++|+.|+|++|.+++.
T Consensus 249 ~~~~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~ 328 (461)
T 1z7x_W 249 PGLLHPSSRLRTLWIWECGITAKGCGDLCRVLRAKESLKELSLAGNELGDEGARLLCETLLEPGCQLESLWVKSCSFTAA 328 (461)
T ss_dssp HHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCTTCCEEECTTCCCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGG
T ss_pred HHHhcCCCCceEEECcCCCCCHHHHHHHHHHHhhCCCcceEECCCCCCchHHHHHHHHHhccCCccceeeEcCCCCCchH
Confidence 33344678888888888888753 5666777888888888888876533222 24788888888877754
Q ss_pred ----CCCCcCC-ccccEEEccCCcCcccCchhHhhc----CCCCcEEEcccCcCcc----cCCCC-CcccccccccccCC
Q 003847 214 ----LPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEK----IPVNATIDLSFNNLTG----EIPES-NVFMNQESSSFSGN 279 (791)
Q Consensus 214 ----~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~----l~~l~~l~l~~N~l~~----~~p~~-~~~~~~~~~~~~~n 279 (791)
++..+.. .+|++|+|++|++++..+..+... .++|++|+|++|++++ .+|.. ....++..+.+.+|
T Consensus 329 ~~~~l~~~l~~~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~i~~~~~~~l~~~l~~~~~L~~L~l~~N 408 (461)
T 1z7x_W 329 CCSHFSSVLAQNRFLLELQISNNRLEDAGVRELCQGLGQPGSVLRVLWLADCDVSDSSCSSLAATLLANHSLRELDLSNN 408 (461)
T ss_dssp GHHHHHHHHHHCSSCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCCHHHHHHHHHHHHHCCCCCEEECCSS
T ss_pred HHHHHHHHHhhCCCccEEEccCCccccccHHHHHHHHcCCCCceEEEECCCCCCChhhHHHHHHHHHhCCCccEEECCCC
Confidence 2333322 467888888887775545444432 4577888888887774 44433 22345555666666
Q ss_pred C
Q 003847 280 L 280 (791)
Q Consensus 280 ~ 280 (791)
+
T Consensus 409 ~ 409 (461)
T 1z7x_W 409 C 409 (461)
T ss_dssp S
T ss_pred C
Confidence 4
No 380
>1z7x_W Ribonuclease inhibitor; leucine-rich repeat, enzyme- inhibitor complex, structural genomics, protein structure initiative, PSI, CESG; HET: CIT; 1.95A {Homo sapiens} SCOP: c.10.1.1 PDB: 2q4g_W* 2bex_A 1a4y_A 2bnh_A 1dfj_I
Probab=99.53 E-value=1.1e-16 Score=180.27 Aligned_cols=111 Identities=23% Similarity=0.155 Sum_probs=52.5
Q ss_pred CCcEEEEEcCCCCCccCCCcC-----CCCCCCCCEEeCcCCCCCCC----CcccccCCCCccEEEccCCcCCCCCccccC
Q 003847 80 DSRVIGLALPNSQLLGSIPAD-----LGMIEFLQYLDLSNNSLNGS----LSFSLFNASQLRNLDLSNNLISGHLPETMG 150 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~-----~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 150 (791)
..+++.|+|++|.+.+..+.. +..+++|++|+|++|++++. ++..+..+++|++|+|++|.++...+..+.
T Consensus 112 ~~~L~~L~Ls~n~i~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~ 191 (461)
T 1z7x_W 112 LPTLQELHLSDNLLGDAGLQLLCEGLLDPQCRLEKLQLEYCSLSAASCEPLASVLRAKPDFKELTVSNNDINEAGVRVLC 191 (461)
T ss_dssp CTTCCEEECCSSBCHHHHHHHHHHHHTSTTCCCCEEECTTSCCBGGGHHHHHHHHHHCTTCCEEECCSSBCHHHHHHHHH
T ss_pred CCceeEEECCCCcCchHHHHHHHHHHhcCCCcceEEECCCCCCCHHHHHHHHHHHhhCCCCCEEECcCCCcchHHHHHHH
Confidence 455666666666655332221 12234556666666655542 233344455555555555555432222221
Q ss_pred -----CCCCCCEEeCcCCcCCCC----CccccCCCCCCCEEeCCCCcCC
Q 003847 151 -----SLHNLQLLNLSDNALAGK----LPVSLTTLQSLTIVSLKNNYFS 190 (791)
Q Consensus 151 -----~l~~L~~L~ls~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 190 (791)
.+++|++|+|++|.+++. ++..+..+++|++|+|++|+++
T Consensus 192 ~~l~~~~~~L~~L~L~~n~l~~~~~~~l~~~l~~~~~L~~L~Ls~n~l~ 240 (461)
T 1z7x_W 192 QGLKDSPCQLEALKLESCGVTSDNCRDLCGIVASKASLRELALGSNKLG 240 (461)
T ss_dssp HHHHHSCCCCCEEECTTSCCBTTHHHHHHHHHHHCTTCCEEECCSSBCH
T ss_pred HHHhcCCCCceEEEccCCCCcHHHHHHHHHHHHhCCCccEEeccCCcCC
Confidence 233455555555555432 2344444455555555555444
No 381
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.53 E-value=1.2e-14 Score=140.80 Aligned_cols=132 Identities=21% Similarity=0.184 Sum_probs=82.3
Q ss_pred CCCCCCCCCEEeCcCCCCCCCCcccccCCC-CccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCC
Q 003847 100 DLGMIEFLQYLDLSNNSLNGSLSFSLFNAS-QLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQS 178 (791)
Q Consensus 100 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~ 178 (791)
.+.++++|+.|+|++|+|+. +|. +..+. +|++|+|++|+|++. ..|.++++|++|+|++|+|++..+..|..+++
T Consensus 14 ~~~~~~~L~~L~l~~n~l~~-i~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~ 89 (176)
T 1a9n_A 14 QYTNAVRDRELDLRGYKIPV-IEN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPD 89 (176)
T ss_dssp EEECTTSCEEEECTTSCCCS-CCC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTT
T ss_pred hcCCcCCceEEEeeCCCCch-hHH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCC
Confidence 34556677777777777763 343 33333 777777777777643 45666777777777777776544444466666
Q ss_pred CCEEeCCCCcCCCCCCCCCcccceeccccccccccCCC--CcCC-ccccEEEccCCcCcccCchh----HhhcCCCCcEE
Q 003847 179 LTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLINGSLPP--DIGG-YSLRYLNLSYNRLSGEIPPQ----FGEKIPVNATI 251 (791)
Q Consensus 179 L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~~~p~--~~~~-~~L~~L~l~~N~l~g~ip~~----~~~~l~~l~~l 251 (791)
|++|+|++|+|+. +|. .+.. .+|++|+|++|.++ .+|.. +.. +++|+.|
T Consensus 90 L~~L~L~~N~i~~----------------------~~~~~~l~~l~~L~~L~l~~N~i~-~~~~~~~~~~~~-l~~L~~L 145 (176)
T 1a9n_A 90 LTELILTNNSLVE----------------------LGDLDPLASLKSLTYLCILRNPVT-NKKHYRLYVIYK-VPQVRVL 145 (176)
T ss_dssp CCEEECCSCCCCC----------------------GGGGGGGGGCTTCCEEECCSSGGG-GSTTHHHHHHHH-CTTCSEE
T ss_pred CCEEECCCCcCCc----------------------chhhHhhhcCCCCCEEEecCCCCC-CcHhHHHHHHHH-CCcccee
Confidence 6666666666643 222 2222 35667777777776 56654 444 8888888
Q ss_pred EcccCcCc
Q 003847 252 DLSFNNLT 259 (791)
Q Consensus 252 ~l~~N~l~ 259 (791)
|+++|.+.
T Consensus 146 d~~~n~~~ 153 (176)
T 1a9n_A 146 DFQKVKLK 153 (176)
T ss_dssp TTEECCHH
T ss_pred CCCcCCHH
Confidence 88888765
No 382
>1a9n_A U2A', U2A'; complex (nuclear protein/RNA), RNA, snRNP, ribonucleoprotein, RNA binding protein/RNA complex; 2.38A {Homo sapiens} SCOP: c.10.2.4
Probab=99.52 E-value=7.8e-15 Score=142.09 Aligned_cols=126 Identities=25% Similarity=0.240 Sum_probs=103.4
Q ss_pred CCcEEEEEcCCCCCccCCCcCCCCCC-CCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEE
Q 003847 80 DSRVIGLALPNSQLLGSIPADLGMIE-FLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLL 158 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~~~~~~l~-~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L 158 (791)
...++.|+|++|++... +. +..+. +|++|+|++|.|++. ..|.++++|++|+|++|+|++..+..|..+++|++|
T Consensus 18 ~~~L~~L~l~~n~l~~i-~~-~~~~~~~L~~L~Ls~N~l~~~--~~l~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L 93 (176)
T 1a9n_A 18 AVRDRELDLRGYKIPVI-EN-LGATLDQFDAIDFSDNEIRKL--DGFPLLRRLKTLLVNNNRICRIGEGLDQALPDLTEL 93 (176)
T ss_dssp TTSCEEEECTTSCCCSC-CC-GGGGTTCCSEEECCSSCCCEE--CCCCCCSSCCEEECCSSCCCEECSCHHHHCTTCCEE
T ss_pred cCCceEEEeeCCCCchh-HH-hhhcCCCCCEEECCCCCCCcc--cccccCCCCCEEECCCCcccccCcchhhcCCCCCEE
Confidence 56899999999999854 54 55555 999999999999965 689999999999999999996655666999999999
Q ss_pred eCcCCcCCCCCcc--ccCCCCCCCEEeCCCCcCCCCCCC-------CCcccceecccccccc
Q 003847 159 NLSDNALAGKLPV--SLTTLQSLTIVSLKNNYFSDGLPS-------KFNSVQVLDLSSNLIN 211 (791)
Q Consensus 159 ~ls~N~l~~~~p~--~~~~l~~L~~L~L~~N~l~~~~p~-------~l~~L~~L~ls~N~l~ 211 (791)
+|++|+|+ .+|. .+..+++|+.|+|++|.++.. |. .+++|+.||+++|.+.
T Consensus 94 ~L~~N~i~-~~~~~~~l~~l~~L~~L~l~~N~i~~~-~~~~~~~~~~l~~L~~Ld~~~n~~~ 153 (176)
T 1a9n_A 94 ILTNNSLV-ELGDLDPLASLKSLTYLCILRNPVTNK-KHYRLYVIYKVPQVRVLDFQKVKLK 153 (176)
T ss_dssp ECCSCCCC-CGGGGGGGGGCTTCCEEECCSSGGGGS-TTHHHHHHHHCTTCSEETTEECCHH
T ss_pred ECCCCcCC-cchhhHhhhcCCCCCEEEecCCCCCCc-HhHHHHHHHHCCccceeCCCcCCHH
Confidence 99999997 5666 888999999999999999753 33 2356666666666554
No 383
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.52 E-value=7.2e-14 Score=134.37 Aligned_cols=104 Identities=26% Similarity=0.258 Sum_probs=89.0
Q ss_pred EEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCc
Q 003847 85 GLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNA 164 (791)
Q Consensus 85 ~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~ 164 (791)
.|++++|+|+. +|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|+
T Consensus 13 ~l~~s~n~l~~-ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~N~ 89 (170)
T 3g39_A 13 TVDCSGKSLAS-VPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQ 89 (170)
T ss_dssp EEECTTSCCSS-CCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSC
T ss_pred EEEeCCCCcCc-cCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCCCc
Confidence 46666788875 566553 889999999999998889899999999999999999997777778999999999999999
Q ss_pred CCCCCccccCCCCCCCEEeCCCCcCCC
Q 003847 165 LAGKLPVSLTTLQSLTIVSLKNNYFSD 191 (791)
Q Consensus 165 l~~~~p~~~~~l~~L~~L~L~~N~l~~ 191 (791)
|++..+..|.++++|+.|+|++|.++.
T Consensus 90 l~~~~~~~~~~l~~L~~L~L~~N~~~c 116 (170)
T 3g39_A 90 LKSIPRGAFDNLKSLTHIWLLNNPWDC 116 (170)
T ss_dssp CCCCCTTTTTTCTTCCEEECCSSCBCT
T ss_pred cCEeCHHHhcCCCCCCEEEeCCCCCCC
Confidence 997777788899999999999998875
No 384
>1dce_A Protein (RAB geranylgeranyltransferase alpha subunit); 2.0 A resolution, N-formylmethionine, alpha subunit; HET: FME; 2.00A {Rattus norvegicus} SCOP: a.118.6.1 b.7.4.1 c.10.2.2 PDB: 1ltx_A*
Probab=99.51 E-value=3e-14 Score=163.49 Aligned_cols=117 Identities=25% Similarity=0.284 Sum_probs=67.1
Q ss_pred CCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCC
Q 003847 107 LQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKN 186 (791)
Q Consensus 107 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~ 186 (791)
|+.|+|++|+|++ +|. |.++++|+.|+|++|+|+ .+|..|++|++|+.|+|++|+|++ +| .|.++++|+.|+|++
T Consensus 443 L~~L~Ls~n~l~~-lp~-~~~l~~L~~L~Ls~N~l~-~lp~~~~~l~~L~~L~Ls~N~l~~-lp-~l~~l~~L~~L~Ls~ 517 (567)
T 1dce_A 443 VRVLHLAHKDLTV-LCH-LEQLLLVTHLDLSHNRLR-ALPPALAALRCLEVLQASDNALEN-VD-GVANLPRLQELLLCN 517 (567)
T ss_dssp CSEEECTTSCCSS-CCC-GGGGTTCCEEECCSSCCC-CCCGGGGGCTTCCEEECCSSCCCC-CG-GGTTCSSCCEEECCS
T ss_pred ceEEEecCCCCCC-CcC-ccccccCcEeecCccccc-ccchhhhcCCCCCEEECCCCCCCC-Cc-ccCCCCCCcEEECCC
Confidence 5566666666664 443 666666666666666666 556666666666666666666664 44 566666666666666
Q ss_pred CcCCCCC-CCCC---cccceeccccccccccCCCCcC----CccccEEEc
Q 003847 187 NYFSDGL-PSKF---NSVQVLDLSSNLINGSLPPDIG----GYSLRYLNL 228 (791)
Q Consensus 187 N~l~~~~-p~~l---~~L~~L~ls~N~l~~~~p~~~~----~~~L~~L~l 228 (791)
|+|++.. |..| ++|+.|+|++|+|++.+|.... .++|+.|++
T Consensus 518 N~l~~~~~p~~l~~l~~L~~L~L~~N~l~~~~~~~~~l~~~lp~L~~L~l 567 (567)
T 1dce_A 518 NRLQQSAAIQPLVSCPRLVLLNLQGNSLCQEEGIQERLAEMLPSVSSILT 567 (567)
T ss_dssp SCCCSSSTTGGGGGCTTCCEEECTTSGGGGSSSCTTHHHHHCTTCSEEEC
T ss_pred CCCCCCCCcHHHhcCCCCCEEEecCCcCCCCccHHHHHHHHCcccCccCC
Confidence 6666554 4433 5566666666666644332211 135666653
No 385
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.51 E-value=9.5e-14 Score=134.03 Aligned_cols=105 Identities=26% Similarity=0.229 Sum_probs=90.9
Q ss_pred EEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCC
Q 003847 84 IGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDN 163 (791)
Q Consensus 84 ~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N 163 (791)
+.|++++|+|. .+|..+. ++|+.|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 46888999985 5676664 88999999999999888999999999999999999999766667889999999999999
Q ss_pred cCCCCCccccCCCCCCCEEeCCCCcCCC
Q 003847 164 ALAGKLPVSLTTLQSLTIVSLKNNYFSD 191 (791)
Q Consensus 164 ~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 191 (791)
+|++..+..|..+++|+.|+|++|.+..
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~~c 119 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPWDC 119 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCBCT
T ss_pred ccceeCHHHhccccCCCEEEeCCCCccc
Confidence 9997666678899999999999998875
No 386
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.50 E-value=8e-17 Score=159.43 Aligned_cols=148 Identities=20% Similarity=0.239 Sum_probs=75.0
Q ss_pred CCCEEeCcCCCCCCCCcc------cccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCC
Q 003847 106 FLQYLDLSNNSLNGSLSF------SLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSL 179 (791)
Q Consensus 106 ~L~~L~L~~N~l~~~~p~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 179 (791)
.++.++|+.|.+.|.+|. .|.++++|++|+|++|+|++ +| .+.++++|+.|+|++|+|+ .+|..+..+++|
T Consensus 19 ~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~L 95 (198)
T 1ds9_A 19 SVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADTL 95 (198)
T ss_dssp CCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHHC
T ss_pred cccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCcC
Confidence 344444444444444333 45555555555555555553 34 4555555555555555555 344444444555
Q ss_pred CEEeCCCCcCCCCCCC--CCcccceeccccccccccCC-CCcCC-ccccEEEccCCcCcccCch---------hHhhcCC
Q 003847 180 TIVSLKNNYFSDGLPS--KFNSVQVLDLSSNLINGSLP-PDIGG-YSLRYLNLSYNRLSGEIPP---------QFGEKIP 246 (791)
Q Consensus 180 ~~L~L~~N~l~~~~p~--~l~~L~~L~ls~N~l~~~~p-~~~~~-~~L~~L~l~~N~l~g~ip~---------~~~~~l~ 246 (791)
+.|+|++|+|++ +|. .+++|+.|+|++|+|++..+ ..+.. .+|++|++++|.+++.+|. .....++
T Consensus 96 ~~L~L~~N~l~~-l~~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~l~ 174 (198)
T 1ds9_A 96 EELWISYNQIAS-LSGIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKRLP 174 (198)
T ss_dssp SEEEEEEEECCC-HHHHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHHCS
T ss_pred CEEECcCCcCCc-CCccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHhCC
Confidence 555555555544 221 11445555555555552211 12333 4677777777777655443 2233488
Q ss_pred CCcEEEcccCcCc
Q 003847 247 VNATIDLSFNNLT 259 (791)
Q Consensus 247 ~l~~l~l~~N~l~ 259 (791)
+|+.|| +|+++
T Consensus 175 ~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 175 NLKKLD--GMPVD 185 (198)
T ss_dssp SCSEEC--CGGGT
T ss_pred CcEEEC--CcccC
Confidence 888776 66665
No 387
>3g39_A Variable lymphocyte receptor VLRB.2D; antibody, X-RAY, crystallography, immune system; 1.55A {Petromyzon marinus} PDB: 3g3a_A 3g3b_A 3twi_D
Probab=99.47 E-value=1.9e-13 Score=131.44 Aligned_cols=86 Identities=26% Similarity=0.233 Sum_probs=69.4
Q ss_pred CCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCC
Q 003847 107 LQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKN 186 (791)
Q Consensus 107 L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~ 186 (791)
.+.|++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++
T Consensus 11 ~~~l~~s~n~l~-~ip~~~~--~~l~~L~L~~N~i~~~~~~~~~~l~~L~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~ 87 (170)
T 3g39_A 11 GTTVDCSGKSLA-SVPTGIP--TTTQVLYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLND 87 (170)
T ss_dssp TTEEECTTSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCS
T ss_pred CCEEEeCCCCcC-ccCccCC--CCCcEEEcCCCcCCccChhhhcCcccCCEEECCCCCcCccChhhccCCCCCCEEECCC
Confidence 468899999988 4666553 7888899999999887788888888999999999998877777778888888888888
Q ss_pred CcCCCCCCC
Q 003847 187 NYFSDGLPS 195 (791)
Q Consensus 187 N~l~~~~p~ 195 (791)
|+|++..+.
T Consensus 88 N~l~~~~~~ 96 (170)
T 3g39_A 88 NQLKSIPRG 96 (170)
T ss_dssp SCCCCCCTT
T ss_pred CccCEeCHH
Confidence 888764443
No 388
>1ds9_A Outer arm dynein; leucine-rich repeat, beta-BETA-alpha cylinder, flagella, contractIle protein; NMR {Chlamydomonas reinhardtii} SCOP: c.10.3.1 PDB: 1m9l_A
Probab=99.46 E-value=1.1e-16 Score=158.53 Aligned_cols=147 Identities=24% Similarity=0.314 Sum_probs=122.0
Q ss_pred CcEEEEEcCCCCCccCCCc------CCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCC
Q 003847 81 SRVIGLALPNSQLLGSIPA------DLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHN 154 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~------~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~ 154 (791)
.+++.++|+.+++.|.+|. .|..+++|++|+|++|+|++ +| .+.++++|++|+|++|+|+ .+|..+..+++
T Consensus 18 ~~l~~l~l~~~~l~~~~~~l~~l~~~~~~l~~L~~L~ls~n~l~~-l~-~~~~l~~L~~L~l~~n~l~-~l~~~~~~~~~ 94 (198)
T 1ds9_A 18 KSVVATEAEKVELHGMIPPIEKMDATLSTLKACKHLALSTNNIEK-IS-SLSGMENLRILSLGRNLIK-KIENLDAVADT 94 (198)
T ss_dssp TCCCCTTCSEEECCBCCTTCCCCHHHHHHTTTCSEEECSEEEESC-CC-CHHHHTTCCEEEEEEEEEC-SCSSHHHHHHH
T ss_pred ccccCcchheeEeccccCcHhhhhHHHhcCCCCCEEECCCCCCcc-cc-ccccCCCCCEEECCCCCcc-cccchhhcCCc
Confidence 4566667777777777776 89999999999999999996 67 8999999999999999998 78888888899
Q ss_pred CCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCC----CCCcccceeccccccccccCCCC----------cCC
Q 003847 155 LQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLP----SKFNSVQVLDLSSNLINGSLPPD----------IGG 220 (791)
Q Consensus 155 L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p----~~l~~L~~L~ls~N~l~~~~p~~----------~~~ 220 (791)
|++|+|++|++++ +| .+..+++|+.|+|++|++++..+ ..+++|++|+|++|.+++.+|.. +..
T Consensus 95 L~~L~L~~N~l~~-l~-~~~~l~~L~~L~l~~N~i~~~~~~~~l~~l~~L~~L~l~~N~l~~~~~~~~~~~~~~~~~~~~ 172 (198)
T 1ds9_A 95 LEELWISYNQIAS-LS-GIEKLVNLRVLYMSNNKITNWGEIDKLAALDKLEDLLLAGNPLYNDYKENNATSEYRIEVVKR 172 (198)
T ss_dssp CSEEEEEEEECCC-HH-HHHHHHHSSEEEESEEECCCHHHHHHHTTTTTCSEEEECSCHHHHHHHTTTTHHHHHHHHHHH
T ss_pred CCEEECcCCcCCc-CC-ccccCCCCCEEECCCCcCCchhHHHHHhcCCCCCEEEecCCccccccccccchHHHHHHHHHh
Confidence 9999999999995 55 68889999999999999987332 35689999999999998776652 333
Q ss_pred -ccccEEEccCCcCc
Q 003847 221 -YSLRYLNLSYNRLS 234 (791)
Q Consensus 221 -~~L~~L~l~~N~l~ 234 (791)
.+|++|| +|.++
T Consensus 173 l~~L~~Ld--~~~i~ 185 (198)
T 1ds9_A 173 LPNLKKLD--GMPVD 185 (198)
T ss_dssp CSSCSEEC--CGGGT
T ss_pred CCCcEEEC--CcccC
Confidence 5789887 67765
No 389
>2r9u_A Variable lymphocyte receptor; adaptive immunity, VLR, leucine-rich repeat, LRR, system; 2.10A {Petromyzon marinus}
Probab=99.44 E-value=3.5e-13 Score=130.02 Aligned_cols=100 Identities=25% Similarity=0.250 Sum_probs=74.3
Q ss_pred CEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCC
Q 003847 108 QYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNN 187 (791)
Q Consensus 108 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N 187 (791)
+.+++++|+|+ .+|..+. ++|++|+|++|+|++..|..|.++++|++|+|++|+|++..+..|.++++|++|+|++|
T Consensus 15 ~~l~~~~n~l~-~iP~~~~--~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~Ls~N~l~~i~~~~~~~l~~L~~L~L~~N 91 (174)
T 2r9u_A 15 TLVNCQNIRLA-SVPAGIP--TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDN 91 (174)
T ss_dssp SEEECCSSCCS-SCCSCCC--TTCSEEECCSSCCCCCCTTTTTTCTTCCEEECCSSCCCCCCTTTTTTCTTCCEEECCSS
T ss_pred cEEEeCCCCCC-ccCCCcC--CCCcEEEeCCCCccccCHHHhcCCcCCCEEECCCCCCCccChhHhCCcchhhEEECCCC
Confidence 67899999886 6676654 78889999999998888888888888999999999888766666788888888888888
Q ss_pred cCCCCCCCCC---cccceeccccccc
Q 003847 188 YFSDGLPSKF---NSVQVLDLSSNLI 210 (791)
Q Consensus 188 ~l~~~~p~~l---~~L~~L~ls~N~l 210 (791)
+|++..+..| ++|++|+|++|.+
T Consensus 92 ~l~~l~~~~~~~l~~L~~L~L~~N~~ 117 (174)
T 2r9u_A 92 HLKSIPRGAFDNLKSLTHIYLYNNPW 117 (174)
T ss_dssp CCCCCCTTTTTTCTTCSEEECCSSCB
T ss_pred ccceeCHHHhccccCCCEEEeCCCCc
Confidence 8876444322 3344444444443
No 390
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.44 E-value=2.1e-13 Score=147.21 Aligned_cols=108 Identities=25% Similarity=0.195 Sum_probs=91.4
Q ss_pred ceeeeeeeCCCCCCCCCCcEEEEEcCCC-CCccCCCcCCCCCCCCCEEeCcC-CCCCCCCcccccCCCCccEEEccCCcC
Q 003847 64 CSWNGVTCASPGEGNNDSRVIGLALPNS-QLLGSIPADLGMIEFLQYLDLSN-NSLNGSLSFSLFNASQLRNLDLSNNLI 141 (791)
Q Consensus 64 c~w~gv~C~~~~~~~~~~~v~~L~L~~~-~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~L~~N~l 141 (791)
|.|..|.|. ++ +|++ +|. |..+++|+.|+|++ |+|++..+..|.+|++|++|+|++|+|
T Consensus 8 C~~~~v~~~-----------------~~n~l~~-ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l 68 (347)
T 2ifg_A 8 HGSSGLRCT-----------------RDGALDS-LHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGL 68 (347)
T ss_dssp SSSSCEECC-----------------SSCCCTT-TTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCC
T ss_pred ccCCEEEcC-----------------CCCCCCc-cCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCcc
Confidence 777777775 34 6664 677 99999999999996 999988888999999999999999999
Q ss_pred CCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCC
Q 003847 142 SGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSD 191 (791)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~ 191 (791)
++..|..|.+|++|+.|+|++|+|++..+..|..+. |+.|+|++|.|..
T Consensus 69 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~~~-L~~l~l~~N~~~c 117 (347)
T 2ifg_A 69 RFVAPDAFHFTPRLSRLNLSFNALESLSWKTVQGLS-LQELVLSGNPLHC 117 (347)
T ss_dssp CEECTTGGGSCSCCCEEECCSSCCSCCCSTTTCSCC-CCEEECCSSCCCC
T ss_pred ceeCHHHhcCCcCCCEEeCCCCccceeCHHHcccCC-ceEEEeeCCCccC
Confidence 998898999999999999999999976666666665 8888888888764
No 391
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.35 E-value=1.3e-12 Score=140.93 Aligned_cols=87 Identities=20% Similarity=0.159 Sum_probs=73.3
Q ss_pred CEEeCcCC-CCCCCCcccccCCCCccEEEccC-CcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCC
Q 003847 108 QYLDLSNN-SLNGSLSFSLFNASQLRNLDLSN-NLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLK 185 (791)
Q Consensus 108 ~~L~L~~N-~l~~~~p~~~~~l~~L~~L~L~~-N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~ 185 (791)
..+++++| +|+ .+|. |..+++|++|+|++ |+|++..+..|.+|++|+.|+|++|+|++..|..|.+|++|+.|+|+
T Consensus 11 ~~v~~~~~n~l~-~ip~-l~~~~~L~~L~l~~~n~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~l~ 88 (347)
T 2ifg_A 11 SGLRCTRDGALD-SLHH-LPGAENLTELYIENQQHLQHLELRDLRGLGELRNLTIVKSGLRFVAPDAFHFTPRLSRLNLS 88 (347)
T ss_dssp SCEECCSSCCCT-TTTT-SCSCSCCSEEECCSCSSCCEECGGGSCSCCCCSEEECCSSCCCEECTTGGGSCSCCCEEECC
T ss_pred CEEEcCCCCCCC-ccCC-CCCCCCeeEEEccCCCCCCCcChhHhccccCCCEEECCCCccceeCHHHhcCCcCCCEEeCC
Confidence 35788887 888 4777 88999999999996 99998888889999999999999999998888888999998888888
Q ss_pred CCcCCCCCCCC
Q 003847 186 NNYFSDGLPSK 196 (791)
Q Consensus 186 ~N~l~~~~p~~ 196 (791)
+|+|++..+..
T Consensus 89 ~N~l~~~~~~~ 99 (347)
T 2ifg_A 89 FNALESLSWKT 99 (347)
T ss_dssp SSCCSCCCSTT
T ss_pred CCccceeCHHH
Confidence 88887644443
No 392
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.33 E-value=1.9e-12 Score=138.56 Aligned_cols=182 Identities=11% Similarity=0.020 Sum_probs=131.2
Q ss_pred CCcEEEEEcCCCCCc--------------------cCCCcCCCC--------CCCCCEEeCcCCCCCCCCcccccCCCCc
Q 003847 80 DSRVIGLALPNSQLL--------------------GSIPADLGM--------IEFLQYLDLSNNSLNGSLSFSLFNASQL 131 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~--------------------~~~~~~~~~--------l~~L~~L~L~~N~l~~~~p~~~~~l~~L 131 (791)
..+++.|+|++|++. .+.+..|.+ +++|+.|+|.+ +++.+.+..|.++++|
T Consensus 48 l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L~~l~L~~-~i~~I~~~aF~~~~~L 126 (329)
T 3sb4_A 48 FPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTLEKVILSE-KIKNIEDAAFKGCDNL 126 (329)
T ss_dssp CTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTCCC-CBCT-TCCEECTTTTTTCTTC
T ss_pred hccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCCcEEECCc-cccchhHHHhhcCccc
Confidence 356777888887776 223345667 88889999888 7876667788888899
Q ss_pred cEEEccCCcCCCCCccccCCCCCCCEEeCcCCcC----CCCCcccc----------------------------------
Q 003847 132 RNLDLSNNLISGHLPETMGSLHNLQLLNLSDNAL----AGKLPVSL---------------------------------- 173 (791)
Q Consensus 132 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l----~~~~p~~~---------------------------------- 173 (791)
+.|+|++|.++...+..|.++.++..|.++.+.. .......|
T Consensus 127 ~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i~~~~~~~l~~~~~~~~~~~~~~~~ 206 (329)
T 3sb4_A 127 KICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTIQVGAMGKLEDEIMKAGLQPRDINF 206 (329)
T ss_dssp CEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEEEECTTCCHHHHHHHTTCCGGGCSE
T ss_pred ceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeEEecCCCcHHHHHhhcccCccccce
Confidence 9999988888767777788877777777665321 10000001
Q ss_pred ----------------CCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-cccc-EEEccCCc
Q 003847 174 ----------------TTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLR-YLNLSYNR 232 (791)
Q Consensus 174 ----------------~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~-~L~l~~N~ 232 (791)
..+++|+.|+|++|+++......| .+|+.|+|++| ++..-+..|.+ .+|+ .|++.+ .
T Consensus 207 l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i~~I~~~aF~~~~~L~~~l~l~~-~ 284 (329)
T 3sb4_A 207 LTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-LKTIGQRVFSNCGRLAGTLELPA-S 284 (329)
T ss_dssp EEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCEEEEECT-T
T ss_pred EEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-cceehHHHhhCChhccEEEEEcc-c
Confidence 026789999999988887555555 68899999988 77555566666 4698 999988 7
Q ss_pred CcccCchhHhhcCCCCcEEEcccCcCcccCCCC
Q 003847 233 LSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES 265 (791)
Q Consensus 233 l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~ 265 (791)
++ .|+...|..+++|+.|++++|+++...+..
T Consensus 285 l~-~I~~~aF~~c~~L~~l~l~~n~i~~I~~~a 316 (329)
T 3sb4_A 285 VT-AIEFGAFMGCDNLRYVLATGDKITTLGDEL 316 (329)
T ss_dssp CC-EECTTTTTTCTTEEEEEECSSCCCEECTTT
T ss_pred ce-EEchhhhhCCccCCEEEeCCCccCccchhh
Confidence 77 787777777999999999999988655433
No 393
>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*
Probab=99.25 E-value=1.2e-11 Score=127.68 Aligned_cols=134 Identities=14% Similarity=0.073 Sum_probs=106.6
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
..++.|+.+.||++... ++.+++|+...........+.+|+++++.+. +..+.++++++...+..|+||||++|.+|.
T Consensus 20 ~~~~g~s~~~v~~~~~~-~~~~vlK~~~~~~~~~~~~~~~E~~~l~~l~~~~~vP~v~~~~~~~~~~~lv~e~i~G~~l~ 98 (263)
T 3tm0_A 20 KDTEGMSPAKVYKLVGE-NENLYLKMTDSRYKGTTYDVEREKDMMLWLEGKLPVPKVLHFERHDGWSNLLMSEADGVLCS 98 (263)
T ss_dssp ECCSCCSSSEEEEEECS-SCEEEEEEECGGGTTSTTCHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCSSEEHH
T ss_pred eeccCCCCCeEEEEECC-CCcEEEEeCCcccCCCHHHHHHHHHHHHHHhcCCCCCeEEEEEecCCceEEEEEecCCeehh
Confidence 45677888999999854 6899999987532222346889999999884 677889999998888999999999999987
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc---------------------------------------------
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE--------------------------------------------- 594 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~--------------------------------------------- 594 (791)
+... +......++.+++++|+.||+
T Consensus 99 ~~~~----------~~~~~~~~~~~l~~~l~~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (263)
T 3tm0_A 99 EEYE----------DEQSPEKIIELYAECIRLFHSIDISDCPYTNSLDSRLAELDYLLNNDLADVDCENWEEDTPFKDPR 168 (263)
T ss_dssp HHCC----------TTTCHHHHHHHHHHHHHHHHHSCCTTCSCBCCHHHHHHHHHHHHHTTCSCCSGGGGSTTCSSSSHH
T ss_pred hccC----------CcccHHHHHHHHHHHHHHHhCCCcccCCCcchHHHHHHHHHHHHhccccccccccccccccCCCHH
Confidence 6421 112235788999999999998
Q ss_pred --------------CCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 595 --------------KKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 595 --------------~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
..++|+|++|.||+++++..+.|+||+.+..
T Consensus 169 ~l~~~l~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~lIDwe~a~~ 213 (263)
T 3tm0_A 169 ELYDFLKTEKPEEELVFSHGDLGDSNIFVKDGKVSGFIDLGRSGR 213 (263)
T ss_dssp HHHHHHHHCCCCCCEEEECSSCCTTSEEEETTEEEEECCCTTCEE
T ss_pred HHHHHHHhcCCCCCceEECCCCCcCcEEEECCcEEEEEEchhccc
Confidence 4489999999999998765667999998765
No 394
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.21 E-value=2.9e-13 Score=147.04 Aligned_cols=131 Identities=22% Similarity=0.246 Sum_probs=65.2
Q ss_pred CCccEEEccCCcCCCCCcccc-CCCCCCCEEeCcCCcCCCCCcccc-----CCCCCCCEEeCCCCcCCCC----CC---C
Q 003847 129 SQLRNLDLSNNLISGHLPETM-GSLHNLQLLNLSDNALAGKLPVSL-----TTLQSLTIVSLKNNYFSDG----LP---S 195 (791)
Q Consensus 129 ~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~ls~N~l~~~~p~~~-----~~l~~L~~L~L~~N~l~~~----~p---~ 195 (791)
.+|++|+|++|.|+......+ ..+++|+.|+|++|+|+......+ ...++|++|+|++|.|+.. ++ .
T Consensus 101 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~ 180 (372)
T 3un9_A 101 HALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLLHDQCQITTLRLSNNPLTAAGVAVLMEGLA 180 (372)
T ss_dssp SCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHHSTTCCCCEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHHhcCCccceeeCCCCCCChHHHHHHHHHHh
Confidence 345555555555442211111 123345555555555543222222 2334555555555555431 11 1
Q ss_pred CCcccceecccccccccc----CCCCcCC-ccccEEEccCCcCccc----CchhHhhcCCCCcEEEcccCcCcc
Q 003847 196 KFNSVQVLDLSSNLINGS----LPPDIGG-YSLRYLNLSYNRLSGE----IPPQFGEKIPVNATIDLSFNNLTG 260 (791)
Q Consensus 196 ~l~~L~~L~ls~N~l~~~----~p~~~~~-~~L~~L~l~~N~l~g~----ip~~~~~~l~~l~~l~l~~N~l~~ 260 (791)
..++|++|+|++|.|+.. +...+.. .+|++|+|++|.|+.. +...+.. .++|++|||++|+|+.
T Consensus 181 ~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l~~~L~~-~~~L~~L~Ls~N~i~~ 253 (372)
T 3un9_A 181 GNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALALARAARE-HPSLELLHLYFNELSS 253 (372)
T ss_dssp TCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHHHHHHHH-CSSCCEEECTTSSCCH
T ss_pred cCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHHHHHHHh-CCCCCEEeccCCCCCH
Confidence 124455555555555421 1222222 3688888888888743 2333333 6888899999988864
No 395
>3sb4_A Hypothetical leucine rich repeat protein; LRR, right-handed beta-alpha superhelix, leucine-rich repeat structural genomics; HET: MSE PG4; 1.99A {Bacteroides thetaiotaomicron}
Probab=99.21 E-value=2.2e-11 Score=130.38 Aligned_cols=195 Identities=18% Similarity=0.133 Sum_probs=140.5
Q ss_pred CcEEEEEcCCCCCccCCCcCCCC-CCCCCEEeCcCCCCC--------------------CCCcccccC--------CCCc
Q 003847 81 SRVIGLALPNSQLLGSIPADLGM-IEFLQYLDLSNNSLN--------------------GSLSFSLFN--------ASQL 131 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~~~-l~~L~~L~L~~N~l~--------------------~~~p~~~~~--------l~~L 131 (791)
.+++.|.++++ +.+.--..+.. +++|+.|||++|+|. ...+..|.+ +++|
T Consensus 25 ~~l~~L~l~g~-i~~~~~~~l~~~l~~L~~LdLs~n~i~~~~~~~~~~~~~~~~~~~~~~I~~~aF~~~~~~~~~g~~~L 103 (329)
T 3sb4_A 25 NSITHLTLTGK-LNAEDFRHLRDEFPSLKVLDISNAEIKMYSGKAGTYPNGKFYIYMANFVPAYAFSNVVNGVTKGKQTL 103 (329)
T ss_dssp HHCSEEEEEEE-ECHHHHHHHHHSCTTCCEEEEEEEEECCEEESSSSSGGGCCEEECTTEECTTTTEEEETTEEEECTTC
T ss_pred CceeEEEEecc-ccHHHHHHHHHhhccCeEEecCcceeEEecCccccccccccccccccccCHHHhcccccccccccCCC
Confidence 45677777653 11111112223 788999999999998 223346777 9999
Q ss_pred cEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcC-------CCCC-----------
Q 003847 132 RNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYF-------SDGL----------- 193 (791)
Q Consensus 132 ~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l-------~~~~----------- 193 (791)
+.|+|.+ +++.+-+..|.+|++|+.|+|++|.+....+..|.++.++..|.+..+.. ....
T Consensus 104 ~~l~L~~-~i~~I~~~aF~~~~~L~~l~l~~n~i~~i~~~aF~~~~~l~~l~~~~~~~~~~~~~i~~~~f~~~~~L~~~i 182 (329)
T 3sb4_A 104 EKVILSE-KIKNIEDAAFKGCDNLKICQIRKKTAPNLLPEALADSVTAIFIPLGSSDAYRFKNRWEHFAFIEGEPLETTI 182 (329)
T ss_dssp CC-CBCT-TCCEECTTTTTTCTTCCEEEBCCSSCCEECTTSSCTTTCEEEECTTCTHHHHTSTTTTTSCEEESCCCEEEE
T ss_pred cEEECCc-cccchhHHHhhcCcccceEEcCCCCccccchhhhcCCCceEEecCcchhhhhccccccccccccccccceeE
Confidence 9999999 88867777899999999999999999878888899888888887766321 1000
Q ss_pred ------------------CC---------------------CCcccceeccccccccccCCCCcCC-ccccEEEccCCcC
Q 003847 194 ------------------PS---------------------KFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRL 233 (791)
Q Consensus 194 ------------------p~---------------------~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l 233 (791)
+. ..++|+.|+|++|+++...+..|.. .+|+.|+|.+| +
T Consensus 183 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~L~~l~L~~n~i~~I~~~aF~~~~~L~~l~l~~n-i 261 (329)
T 3sb4_A 183 QVGAMGKLEDEIMKAGLQPRDINFLTIEGKLDNADFKLIRDYMPNLVSLDISKTNATTIPDFTFAQKKYLLKIKLPHN-L 261 (329)
T ss_dssp EECTTCCHHHHHHHTTCCGGGCSEEEEEECCCHHHHHHHHHHCTTCCEEECTTBCCCEECTTTTTTCTTCCEEECCTT-C
T ss_pred EecCCCcHHHHHhhcccCccccceEEEeeeecHHHHHHHHHhcCCCeEEECCCCCcceecHhhhhCCCCCCEEECCcc-c
Confidence 00 1468999999999999655566766 48999999999 7
Q ss_pred cccCchhHhhcCCCCc-EEEcccCcCcccCCCCCc-ccccccccccCCC
Q 003847 234 SGEIPPQFGEKIPVNA-TIDLSFNNLTGEIPESNV-FMNQESSSFSGNL 280 (791)
Q Consensus 234 ~g~ip~~~~~~l~~l~-~l~l~~N~l~~~~p~~~~-~~~~~~~~~~~n~ 280 (791)
+ .|+...|..+.+|+ .|+|.+ +++...+.... ..++..+.+.+|.
T Consensus 262 ~-~I~~~aF~~~~~L~~~l~l~~-~l~~I~~~aF~~c~~L~~l~l~~n~ 308 (329)
T 3sb4_A 262 K-TIGQRVFSNCGRLAGTLELPA-SVTAIEFGAFMGCDNLRYVLATGDK 308 (329)
T ss_dssp C-EECTTTTTTCTTCCEEEEECT-TCCEECTTTTTTCTTEEEEEECSSC
T ss_pred c-eehHHHhhCChhccEEEEEcc-cceEEchhhhhCCccCCEEEeCCCc
Confidence 7 89998888899999 999998 67655444432 2345555554543
No 396
>3un9_A NLR family member X1; leucine rich repeat (LRR), antiviral signaling, MAVS, TRAF6, UQCRC2, immune system; 2.65A {Homo sapiens}
Probab=99.19 E-value=1.4e-13 Score=149.66 Aligned_cols=163 Identities=21% Similarity=0.159 Sum_probs=120.1
Q ss_pred CcEEEEEcCCCCCccCCCcCCCC-----CCCCCEEeCcCCCCCCCCcccc-cCCCCccEEEccCCcCCCCCcccc-----
Q 003847 81 SRVIGLALPNSQLLGSIPADLGM-----IEFLQYLDLSNNSLNGSLSFSL-FNASQLRNLDLSNNLISGHLPETM----- 149 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~~~-----l~~L~~L~L~~N~l~~~~p~~~-~~l~~L~~L~L~~N~l~~~~p~~~----- 149 (791)
..++.|+|++|+|+......|.. .++|+.|+|++|.|+......+ ..+.+|+.|+|++|+|+......+
T Consensus 72 ~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~L~~L~Ls~n~l~~~~~~~L~~~L~ 151 (372)
T 3un9_A 72 SSLRQLNLAGVRMTPVKCTVVAAVLGSGRHALDEVNLASCQLDPAGLRTLLPVFLRARKLGLQLNSLGPEACKDLRDLLL 151 (372)
T ss_dssp TTCCEEECTTSCCCHHHHHHHHHHHSSCSSCEEEEECTTCCCCHHHHHHTHHHHHTEEEEECCSSCCCHHHHHHHHHHHH
T ss_pred hhCCEEEecCCCCCHHHHHHHHHHHhhCCCCceEEEecCCCCCHHHHHHHHHHHHhccHhhcCCCCCCHHHHHHHHHHHH
Confidence 56889999999998654443333 3799999999999975433333 346789999999999985444443
Q ss_pred CCCCCCCEEeCcCCcCCC----CCccccCCCCCCCEEeCCCCcCCCCC----CC---CCcccceeccccccccccCC---
Q 003847 150 GSLHNLQLLNLSDNALAG----KLPVSLTTLQSLTIVSLKNNYFSDGL----PS---KFNSVQVLDLSSNLINGSLP--- 215 (791)
Q Consensus 150 ~~l~~L~~L~ls~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~----p~---~l~~L~~L~ls~N~l~~~~p--- 215 (791)
...++|+.|+|++|.|+. .++..+..+++|++|+|++|.|++.. .. ..++|+.|+|++|.|+..-.
T Consensus 152 ~~~~~L~~L~Ls~n~l~~~~~~~l~~~L~~~~~L~~L~Ls~N~l~~~g~~~L~~~L~~~~~L~~L~Ls~N~i~~~g~~~l 231 (372)
T 3un9_A 152 HDQCQITTLRLSNNPLTAAGVAVLMEGLAGNTSVTHLSLLHTGLGDEGLELLAAQLDRNRQLQELNVAYNGAGDTAALAL 231 (372)
T ss_dssp STTCCCCEEECCSSCCHHHHHHHHHHHHHTCSSCCEEECTTSSCHHHHHHHHHHHGGGCSCCCEEECCSSCCCHHHHHHH
T ss_pred hcCCccceeeCCCCCCChHHHHHHHHHHhcCCCcCEEeCCCCCCCcHHHHHHHHHHhcCCCcCeEECCCCCCCHHHHHHH
Confidence 456899999999999974 24455678899999999999998532 22 23689999999999974322
Q ss_pred -CCcC-CccccEEEccCCcCcccCchhHhh
Q 003847 216 -PDIG-GYSLRYLNLSYNRLSGEIPPQFGE 243 (791)
Q Consensus 216 -~~~~-~~~L~~L~l~~N~l~g~ip~~~~~ 243 (791)
..+. ..+|++|+|++|.|++.-...+..
T Consensus 232 ~~~L~~~~~L~~L~Ls~N~i~~~g~~~L~~ 261 (372)
T 3un9_A 232 ARAAREHPSLELLHLYFNELSSEGRQVLRD 261 (372)
T ss_dssp HHHHHHCSSCCEEECTTSSCCHHHHHHHHH
T ss_pred HHHHHhCCCCCEEeccCCCCCHHHHHHHHH
Confidence 2222 257999999999998655544443
No 397
>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6
Probab=99.15 E-value=5.6e-11 Score=122.36 Aligned_cols=127 Identities=13% Similarity=0.141 Sum_probs=98.7
Q ss_pred cccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCC--ccceeeEEEccCceEEEEeccCCCChhHH
Q 003847 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPN--LVRIRGFYWGVDEKLIIYDFVPNGSLANA 561 (791)
Q Consensus 484 G~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~~~~~lv~e~~~~gsL~~~ 561 (791)
+.|..+.||++...+|+.++||+..... ...+.+|+++++.+.+.+ +.+++++....+..++||||++|.+|.
T Consensus 29 ~gg~~~~v~~~~~~~g~~~vlK~~~~~~---~~~~~~E~~~l~~l~~~~~~vP~~~~~~~~~~~~~~v~e~i~G~~l~-- 103 (264)
T 1nd4_A 29 IGCSDAAVFRLSAQGRPVLFVKTDLSGA---LNELQDEAARLSWLATTGVPCAAVLDVVTEAGRDWLLLGEVPGQDLL-- 103 (264)
T ss_dssp CTTSSCEEEEEECTTSCCEEEEEECSCT---TSCHHHHHHHHHHHHTTTCCBCCEEEEEECSSCEEEEEECCSSEETT--
T ss_pred cCCCCceEEEEecCCCCeEEEEeCCccc---chhhhHHHHHHHHHHhCCCCCCeEEEeccCCCCCEEEEEecCCcccC--
Confidence 4556699999988778899999976542 245788999999886444 566889888888889999999998884
Q ss_pred HHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCC---------------------------------------------
Q 003847 562 RYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKK--------------------------------------------- 596 (791)
Q Consensus 562 l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~--------------------------------------------- 596 (791)
. .. .. ...++.++++.|..||+..
T Consensus 104 ~-~~-------~~---~~~~~~~l~~~l~~lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (264)
T 1nd4_A 104 S-SH-------LA---PAEKVSIMADAMRRLHTLDPATCPFDHQAKHRIERARTRMEAGLVDQDDLDEEHQGLAPAELFA 172 (264)
T ss_dssp T-SC-------CC---HHHHHHHHHHHHHHHTTSCGGGCCCBCCHHHHHHHHHHHHHTTCCCTTSCCGGGTTCCHHHHHH
T ss_pred c-Cc-------CC---HhHHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHHHHHHHhcCCccchhhhhhccCccHHHHHH
Confidence 1 10 11 2356778888888888743
Q ss_pred -------------CeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 597 -------------HVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 597 -------------ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
++|+|++|.||++++++.+.|+|||.+..-
T Consensus 173 ~l~~~~~~~~~~~l~HgDl~~~Nil~~~~~~~~liD~~~a~~g 215 (264)
T 1nd4_A 173 RLKARMPDGEDLVVTHGDACLPNIMVENGRFSGFIDCGRLGVA 215 (264)
T ss_dssp HHHHTCCSSCCEEEECSSCCGGGEEEETTEEEEECCCTTCEEE
T ss_pred HHHHhcCCCCCeEEECCCCCCCcEEEECCcEEEEEcchhcccC
Confidence 999999999999987766779999998753
No 398
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.15 E-value=3.5e-13 Score=156.54 Aligned_cols=202 Identities=15% Similarity=0.082 Sum_probs=121.7
Q ss_pred CCCcEEEEEcCCCCCccCCC-cCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEcc-----------CCcCCCC-C
Q 003847 79 NDSRVIGLALPNSQLLGSIP-ADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLS-----------NNLISGH-L 145 (791)
Q Consensus 79 ~~~~v~~L~L~~~~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~-----------~N~l~~~-~ 145 (791)
...+++.|+|++|.+++... ..+..+++|+.|+|++|-..+.++..+.++++|++|+|+ .|.+++. +
T Consensus 291 ~~~~L~~L~Ls~~~l~~~~~~~~~~~~~~L~~L~L~~~~~~~~l~~~~~~~~~L~~L~L~~g~~~~~~~~~~~~~~~~~~ 370 (592)
T 3ogk_B 291 FAAQIRKLDLLYALLETEDHCTLIQKCPNLEVLETRNVIGDRGLEVLAQYCKQLKRLRIERGADEQGMEDEEGLVSQRGL 370 (592)
T ss_dssp GGGGCCEEEETTCCCCHHHHHHHHTTCTTCCEEEEEGGGHHHHHHHHHHHCTTCCEEEEECCCCSSTTSSTTCCCCHHHH
T ss_pred hcCCCcEEecCCCcCCHHHHHHHHHhCcCCCEEeccCccCHHHHHHHHHhCCCCCEEEeecCccccccccccCccCHHHH
Confidence 35689999999999765443 346788888888888332223344444667788888888 3566533 2
Q ss_pred ccccCCCCCCCEEeCcCCcCCCCCccccCC-CCCCCEEeCC----CCcCCCCCC--------CCCcccceeccccc--cc
Q 003847 146 PETMGSLHNLQLLNLSDNALAGKLPVSLTT-LQSLTIVSLK----NNYFSDGLP--------SKFNSVQVLDLSSN--LI 210 (791)
Q Consensus 146 p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~-l~~L~~L~L~----~N~l~~~~p--------~~l~~L~~L~ls~N--~l 210 (791)
+..+.++++|++|+|+.|++++..+..+.. +++|+.|+|+ .|++++... ..+++|+.|+|++| .+
T Consensus 371 ~~l~~~~~~L~~L~l~~~~l~~~~~~~l~~~~~~L~~L~l~~~~~~n~l~~~p~~~~~~~~~~~~~~L~~L~L~~~~~~l 450 (592)
T 3ogk_B 371 IALAQGCQELEYMAVYVSDITNESLESIGTYLKNLCDFRLVLLDREERITDLPLDNGVRSLLIGCKKLRRFAFYLRQGGL 450 (592)
T ss_dssp HHHHHHCTTCSEEEEEESCCCHHHHHHHHHHCCSCCEEEEEECSCCSCCSSCCCHHHHHHHHHHCTTCCEEEEECCGGGC
T ss_pred HHHHhhCccCeEEEeecCCccHHHHHHHHhhCCCCcEEEEeecCCCccccCchHHHHHHHHHHhCCCCCEEEEecCCCCc
Confidence 233445777888888777777666655554 7777777775 666765311 12466777777632 34
Q ss_pred cccCCCCcCC--ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCC--CcccccccccccCCC
Q 003847 211 NGSLPPDIGG--YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPES--NVFMNQESSSFSGNL 280 (791)
Q Consensus 211 ~~~~p~~~~~--~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~--~~~~~~~~~~~~~n~ 280 (791)
++..+..+.. .+|++|+|++|++++.....+...+++|++|+|++|++++..... ..+.++..+.+.+|.
T Consensus 451 ~~~~~~~~~~~~~~L~~L~L~~n~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~ls~n~ 524 (592)
T 3ogk_B 451 TDLGLSYIGQYSPNVRWMLLGYVGESDEGLMEFSRGCPNLQKLEMRGCCFSERAIAAAVTKLPSLRYLWVQGYR 524 (592)
T ss_dssp CHHHHHHHHHSCTTCCEEEECSCCSSHHHHHHHHTCCTTCCEEEEESCCCBHHHHHHHHHHCSSCCEEEEESCB
T ss_pred cHHHHHHHHHhCccceEeeccCCCCCHHHHHHHHhcCcccCeeeccCCCCcHHHHHHHHHhcCccCeeECcCCc
Confidence 4433333322 357777777777765333333344677777777777765332111 123445555555554
No 399
>3ogk_B Coronatine-insensitive protein 1; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana} PDB: 3ogl_B* 3ogm_B*
Probab=99.08 E-value=1.2e-11 Score=143.49 Aligned_cols=130 Identities=15% Similarity=0.063 Sum_probs=81.3
Q ss_pred CCcEEEEEcCCCCCccC----CCcCCCCCCCCCEEeCcCCCCCC----CCcccccCCCCccEEEccCCcCCCCCccccCC
Q 003847 80 DSRVIGLALPNSQLLGS----IPADLGMIEFLQYLDLSNNSLNG----SLSFSLFNASQLRNLDLSNNLISGHLPETMGS 151 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~----~~~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~ 151 (791)
..+++.|+|++|.+++. ++..+..+++|++|+|++|.+++ .++..+.++++|++|+|++|.+.+ +|..+.+
T Consensus 163 ~~~L~~L~L~~~~~~~~~~~~l~~~~~~~~~L~~L~L~~n~~~~~~~~~l~~~~~~~~~L~~L~L~~~~~~~-l~~~~~~ 241 (592)
T 3ogk_B 163 CRKIKTLLMEESSFSEKDGKWLHELAQHNTSLEVLNFYMTEFAKISPKDLETIARNCRSLVSVKVGDFEILE-LVGFFKA 241 (592)
T ss_dssp CTTCSEEECTTCEEECCCSHHHHHHHHHCCCCCEEECTTCCCSSCCHHHHHHHHHHCTTCCEEECSSCBGGG-GHHHHHH
T ss_pred CCCCCEEECccccccCcchhHHHHHHhcCCCccEEEeeccCCCccCHHHHHHHHhhCCCCcEEeccCccHHH-HHHHHhh
Confidence 46788999999987665 33445678889999999998873 344555678889999999988874 6666777
Q ss_pred CCCCCEEeCcCCcCC---CCCccccCCCCCCCEEeCCCCcCCCCCCCC---Ccccceecccccccc
Q 003847 152 LHNLQLLNLSDNALA---GKLPVSLTTLQSLTIVSLKNNYFSDGLPSK---FNSVQVLDLSSNLIN 211 (791)
Q Consensus 152 l~~L~~L~ls~N~l~---~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~---l~~L~~L~ls~N~l~ 211 (791)
+++|+.|+++.+... +..+..+..+++|+.|+++++... .+|.. +++|++|+|++|.++
T Consensus 242 ~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~l~~~~~~-~l~~~~~~~~~L~~L~Ls~~~l~ 306 (592)
T 3ogk_B 242 AANLEEFCGGSLNEDIGMPEKYMNLVFPRKLCRLGLSYMGPN-EMPILFPFAAQIRKLDLLYALLE 306 (592)
T ss_dssp CTTCCEEEECBCCCCTTCTTSSSCCCCCTTCCEEEETTCCTT-TGGGGGGGGGGCCEEEETTCCCC
T ss_pred hhHHHhhcccccccccchHHHHHHhhccccccccCccccchh-HHHHHHhhcCCCcEEecCCCcCC
Confidence 777777777653222 122334444555555555543211 12222 234555555555543
No 400
>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}
Probab=99.03 E-value=4.9e-10 Score=121.37 Aligned_cols=137 Identities=18% Similarity=0.225 Sum_probs=104.5
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcC--CCc-hhhHHHHHHHHHHHhccC--CCCccceeeEEEcc---CceEEEEec
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIG--ENS-VDRFRDFETQVRVIAKLV--HPNLVRIRGFYWGV---DEKLIIYDF 552 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~--~~~-~~~~~~~~~E~~~l~~l~--H~nIv~l~~~~~~~---~~~~lv~e~ 552 (791)
..++.|.++.||++...+ ..+++|+.. ... ......+.+|+++++.+. +..+++++.++.+. +..|+||||
T Consensus 44 ~~l~~G~sn~~y~v~~~~-~~~vlr~~~~p~~~~~~~~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~~~~~g~~~~vme~ 122 (359)
T 3dxp_A 44 EQFKGGQSNPTFKLVTPG-QTYVMRAKPGPKSKLLPSAHAIEREYRVMDALAGTDVPVAKMYALCEDESVIGRAFYIMEF 122 (359)
T ss_dssp EECCC-CCSCEEEEECSS-CEEEEECCCC----------CHHHHHHHHHHHTTSSSCCCCEEEEECCTTTTSSCEEEEEC
T ss_pred EEcCCcccceEEEEEECC-ceEEEEeCCCCCCCCCCcHHHHHHHHHHHHHhhcCCCCCCcEEEECCCCCccCCeEEEEEe
Confidence 468899999999998754 678889876 332 122356888999999996 45578899888766 457999999
Q ss_pred cCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc--------------------------------------
Q 003847 553 VPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-------------------------------------- 594 (791)
Q Consensus 553 ~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-------------------------------------- 594 (791)
++|..+.+... ..++..++..++.++++.|+.||+
T Consensus 123 v~G~~l~~~~~-------~~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (359)
T 3dxp_A 123 VSGRVLWDQSL-------PGMSPAERTAIYDEMNRVIAAMHTVDYQAIGLGDYGKPGNYFQRQIERWTKQYKLSETESIP 195 (359)
T ss_dssp CCCBCCCCTTC-------TTCCHHHHHHHHHHHHHHHHHHHHSCTTTTTCTTSSCCSCHHHHHHHHHHHHHHHHCCSCCH
T ss_pred cCCeecCCCcc-------ccCCHHHHHHHHHHHHHHHHHHhCCCchhccccccCCCCCchHHHHHHHHHHHHhcCCcCCh
Confidence 99988754111 127788899999999999999997
Q ss_pred --------------------CCCeecCCCCCCeEecCCCC--eEEeccCcccc
Q 003847 595 --------------------KKHVHGNLKPRNVLLGNDME--PKIGDFGLERL 625 (791)
Q Consensus 595 --------------------~~ivHrDlkp~NILl~~~~~--~kL~DFGla~~ 625 (791)
..++|+|+++.||+++.++. +.|+||+.+..
T Consensus 196 ~~~~~~~~l~~~~~~~~~~~~~lvHgD~~~~Nil~~~~~~~v~~viDwe~a~~ 248 (359)
T 3dxp_A 196 AMDSLMDWLPQHIPQEDADLTSIVHGDYRLDNLMFHPTEPRVLAVLDWELSTL 248 (359)
T ss_dssp HHHHHHHHGGGCCCSTTSSCCEEECSSCSGGGEEECSSSSCEEEECCCTTCEE
T ss_pred HHHHHHHHHHhcCCCccCCCceEEeCCCCCCcEEEeCCCCcEEEEECcccccc
Confidence 35899999999999997653 68999998864
No 401
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=99.02 E-value=1.6e-09 Score=118.73 Aligned_cols=166 Identities=14% Similarity=0.096 Sum_probs=76.3
Q ss_pred cEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCc
Q 003847 82 RVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLS 161 (791)
Q Consensus 82 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 161 (791)
+++.+.|.++ ++.+-..+|.+ .+|+.++|.+ .++..-+..|.++.+|+.++|++|+++......|. ..+|+.+.|.
T Consensus 136 ~L~~i~l~~~-i~~I~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp 211 (401)
T 4fdw_A 136 QIAKVVLNEG-LKSIGDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLP 211 (401)
T ss_dssp CCSEEECCTT-CCEECTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECC
T ss_pred CccEEEeCCC-ccEECHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeC
Confidence 4555555443 44444445555 2455555553 44434445555555566666655555533333343 3555555555
Q ss_pred CCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC--cccceeccccccccccCCCCcCC-ccccEEEccCCcCc----
Q 003847 162 DNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF--NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLS---- 234 (791)
Q Consensus 162 ~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l--~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~---- 234 (791)
.| ++.+-...|.++++|+.|+|..| ++..-...| .+|+.++| .|.++..-...|.. .+|+.+++.+|.+.
T Consensus 212 ~~-l~~I~~~aF~~~~~L~~l~l~~~-l~~I~~~aF~~~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~ 288 (401)
T 4fdw_A 212 VT-LKEIGSQAFLKTSQLKTIEIPEN-VSTIGQEAFRESGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPE 288 (401)
T ss_dssp TT-CCEECTTTTTTCTTCCCEECCTT-CCEECTTTTTTCCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTT
T ss_pred Cc-hheehhhHhhCCCCCCEEecCCC-ccCccccccccCCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcc
Confidence 33 44344455555555555555543 222222222 34444444 22333222333333 24444544444432
Q ss_pred ccCchhHhhcCCCCcEEEcc
Q 003847 235 GEIPPQFGEKIPVNATIDLS 254 (791)
Q Consensus 235 g~ip~~~~~~l~~l~~l~l~ 254 (791)
..|+...|..+++|+.++|.
T Consensus 289 ~~I~~~aF~~c~~L~~l~l~ 308 (401)
T 4fdw_A 289 AMIHPYCLEGCPKLARFEIP 308 (401)
T ss_dssp CEECTTTTTTCTTCCEECCC
T ss_pred cEECHHHhhCCccCCeEEeC
Confidence 12344444444444444444
No 402
>4fdw_A Leucine rich hypothetical protein; putative cell surface protein, BIG3 domain, LRR domain, STRU genomics; 2.05A {Bacteroides ovatus} PDB: 4fd0_A
Probab=98.96 E-value=3.2e-09 Score=116.28 Aligned_cols=198 Identities=12% Similarity=0.052 Sum_probs=143.9
Q ss_pred CCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCC
Q 003847 73 SPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSL 152 (791)
Q Consensus 73 ~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l 152 (791)
....|.+ ..++.+.|.+ ++..+-+..|.++++|+.++|++|+++......|. .++|+.+.|.+| ++.+-...|.++
T Consensus 150 ~~~aF~~-~~L~~i~lp~-~l~~I~~~aF~~c~~L~~l~l~~n~l~~I~~~aF~-~~~L~~l~lp~~-l~~I~~~aF~~~ 225 (401)
T 4fdw_A 150 GDMAFFN-STVQEIVFPS-TLEQLKEDIFYYCYNLKKADLSKTKITKLPASTFV-YAGIEEVLLPVT-LKEIGSQAFLKT 225 (401)
T ss_dssp CTTTTTT-CCCCEEECCT-TCCEECSSTTTTCTTCCEEECTTSCCSEECTTTTT-TCCCSEEECCTT-CCEECTTTTTTC
T ss_pred CHHhcCC-CCceEEEeCC-CccEehHHHhhCcccCCeeecCCCcceEechhhEe-ecccCEEEeCCc-hheehhhHhhCC
Confidence 3445555 4688899986 77777778899999999999999999855555555 689999999855 775677789999
Q ss_pred CCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---cccceecccccccc-----ccCCCCcCC-ccc
Q 003847 153 HNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLIN-----GSLPPDIGG-YSL 223 (791)
Q Consensus 153 ~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~-----~~~p~~~~~-~~L 223 (791)
++|+.|+|..| ++..-...|.+ .+|+.+.| .|.++......| ++|+.|+|.+|.+. ..-+..|.+ .+|
T Consensus 226 ~~L~~l~l~~~-l~~I~~~aF~~-~~L~~i~l-p~~i~~I~~~aF~~c~~L~~l~l~~~~~~~~~~~~I~~~aF~~c~~L 302 (401)
T 4fdw_A 226 SQLKTIEIPEN-VSTIGQEAFRE-SGITTVKL-PNGVTNIASRAFYYCPELAEVTTYGSTFNDDPEAMIHPYCLEGCPKL 302 (401)
T ss_dssp TTCCCEECCTT-CCEECTTTTTT-CCCSEEEE-ETTCCEECTTTTTTCTTCCEEEEESSCCCCCTTCEECTTTTTTCTTC
T ss_pred CCCCEEecCCC-ccCcccccccc-CCccEEEe-CCCccEEChhHhhCCCCCCEEEeCCccccCCcccEECHHHhhCCccC
Confidence 99999999875 56466667777 78999988 455555444444 68888888888765 233445555 489
Q ss_pred cEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCCCCcccccccccccCCC
Q 003847 224 RYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPESNVFMNQESSSFSGNL 280 (791)
Q Consensus 224 ~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~~~~~~~~~~~~~~~n~ 280 (791)
+.++|. |.++ .|+...|..+.+|+.|+|..| ++..-+......++..+.+.+|.
T Consensus 303 ~~l~l~-~~i~-~I~~~aF~~c~~L~~l~lp~~-l~~I~~~aF~~~~L~~l~l~~n~ 356 (401)
T 4fdw_A 303 ARFEIP-ESIR-ILGQGLLGGNRKVTQLTIPAN-VTQINFSAFNNTGIKEVKVEGTT 356 (401)
T ss_dssp CEECCC-TTCC-EECTTTTTTCCSCCEEEECTT-CCEECTTSSSSSCCCEEEECCSS
T ss_pred CeEEeC-CceE-EEhhhhhcCCCCccEEEECcc-ccEEcHHhCCCCCCCEEEEcCCC
Confidence 999988 4577 788877777889999998655 55444444333366667776663
No 403
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.94 E-value=9.4e-12 Score=144.49 Aligned_cols=198 Identities=14% Similarity=0.072 Sum_probs=132.3
Q ss_pred CCcEEEEEcCCCCCccCCC-cCCCCCCCCCEEeCcCCCCCCC-CcccccCCCCccEEEc---------cCCcCCCCCccc
Q 003847 80 DSRVIGLALPNSQLLGSIP-ADLGMIEFLQYLDLSNNSLNGS-LSFSLFNASQLRNLDL---------SNNLISGHLPET 148 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~~~~-~~~~~l~~L~~L~L~~N~l~~~-~p~~~~~l~~L~~L~L---------~~N~l~~~~p~~ 148 (791)
..+++.|+|++|.+++... ..+..+++|+.|+|++| +... ++.....+++|++|+| +.|.+++.....
T Consensus 288 ~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~-~~~~~l~~l~~~~~~L~~L~L~~~~~~g~~~~~~l~~~~l~~ 366 (594)
T 2p1m_B 288 CSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY-IEDAGLEVLASTCKDLRELRVFPSEPFVMEPNVALTEQGLVS 366 (594)
T ss_dssp HTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG-GHHHHHHHHHHHCTTCCEEEEECSCTTCSSCSSCCCHHHHHH
T ss_pred hCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc-cCHHHHHHHHHhCCCCCEEEEecCcccccccCCCCCHHHHHH
Confidence 3578889998888764432 23567888999999888 4322 2223345788899988 345555333233
Q ss_pred c-CCCCCCCEEeCcCCcCCCCCccccC-CCCCCCEEeCC--C----CcCCCCCC--------CCCcccceeccccccccc
Q 003847 149 M-GSLHNLQLLNLSDNALAGKLPVSLT-TLQSLTIVSLK--N----NYFSDGLP--------SKFNSVQVLDLSSNLING 212 (791)
Q Consensus 149 ~-~~l~~L~~L~ls~N~l~~~~p~~~~-~l~~L~~L~L~--~----N~l~~~~p--------~~l~~L~~L~ls~N~l~~ 212 (791)
+ .++++|+.|+++.|.+++..+..+. .+++|+.|+|+ + |.+++... ..+++|+.|+|++ .++.
T Consensus 367 l~~~~~~L~~L~~~~~~l~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~~~l~~~~~~L~~L~L~~-~l~~ 445 (594)
T 2p1m_B 367 VSMGCPKLESVLYFCRQMTNAALITIARNRPNMTRFRLCIIEPKAPDYLTLEPLDIGFGAIVEHCKDLRRLSLSG-LLTD 445 (594)
T ss_dssp HHHHCTTCCEEEEEESCCCHHHHHHHHHHCTTCCEEEEEESSTTCCCTTTCCCTHHHHHHHHHHCTTCCEEECCS-SCCH
T ss_pred HHHhchhHHHHHHhcCCcCHHHHHHHHhhCCCcceeEeecccCCCcccccCCchhhHHHHHHhhCCCccEEeecC-cccH
Confidence 3 3478899998888888866555554 58899999998 4 56663221 2347899999977 5654
Q ss_pred cCCCCcC--CccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcccCCC--CCcccccccccccCC
Q 003847 213 SLPPDIG--GYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTGEIPE--SNVFMNQESSSFSGN 279 (791)
Q Consensus 213 ~~p~~~~--~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~~~p~--~~~~~~~~~~~~~~n 279 (791)
..+..+. ..+|++|+|++|.+++..+..+...+++|+.|+|++|++++.... ...+.++..+.+.+|
T Consensus 446 ~~~~~l~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~L~~L~L~~n~~~~~~~~~~~~~l~~L~~L~l~~~ 516 (594)
T 2p1m_B 446 KVFEYIGTYAKKMEMLSVAFAGDSDLGMHHVLSGCDSLRKLEIRDCPFGDKALLANASKLETMRSLWMSSC 516 (594)
T ss_dssp HHHHHHHHHCTTCCEEEEESCCSSHHHHHHHHHHCTTCCEEEEESCSCCHHHHHHTGGGGGGSSEEEEESS
T ss_pred HHHHHHHHhchhccEeeccCCCCcHHHHHHHHhcCCCcCEEECcCCCCcHHHHHHHHHhCCCCCEEeeeCC
Confidence 4443443 247999999999998776666655589999999999998644332 122445555666555
No 404
>3sg8_A APH(2'')-ID; antibiotic resistance enzyme, transferase, aminoglycoside, phosphorylation, transferase-antibiotic complex; HET: TOY; 1.80A {Enterococcus casseliflavus} PDB: 3sg9_A* 3n4v_A 3n4t_A 3n4u_A 3r81_A* 3r80_A* 3r7z_A* 3r82_A* 3vcq_A* 4dbx_A 4de4_A* 4dfb_A* 4dfu_A* 4dt9_A* 4dt8_A* 4dtb_A* 3sgc_A 4dta_A* 3lzh_A
Probab=98.93 E-value=1.3e-09 Score=115.04 Aligned_cols=133 Identities=16% Similarity=0.181 Sum_probs=99.0
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-CCC--ccceeeEEEccC---ceEEEEeccC
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV-HPN--LVRIRGFYWGVD---EKLIIYDFVP 554 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~n--Iv~l~~~~~~~~---~~~lv~e~~~ 554 (791)
+.++.|....||++. ..+++|+.... .....+.+|+++++.+. +.. +.+++......+ ..|+|||+++
T Consensus 26 ~~~~~G~~n~v~~v~----~~~vlR~~~~~--~~~~~~~~E~~~l~~l~~~~~v~vP~~~~~~~~~~~~~~~~~vm~~i~ 99 (304)
T 3sg8_A 26 EISGEGNDCIAYEIN----RDFIFKFPKHS--RGSTNLFNEVNILKRIHNKLPLPIPEVVFTGMPSETYQMSFAGFTKIK 99 (304)
T ss_dssp CEEEECSSEEEEEST----TSEEEEEESSH--HHHHHHHHHHHHHHHHTTSSSSCCCCEEEECCCCSSCSCSCEEEECCC
T ss_pred EecCCCCcceEEEEC----CEEEEEecCCc--chHHHHHHHHHHHHHHHhcCCCCCCceEeecCCCCCCCcceEEEcccC
Confidence 358899999999873 56889986543 33467899999998884 333 344544433332 3488999999
Q ss_pred CCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc----------------------------------------
Q 003847 555 NGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE---------------------------------------- 594 (791)
Q Consensus 555 ~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~---------------------------------------- 594 (791)
|.+|.+.... .++.+++..++.+++..|+.||+
T Consensus 100 G~~l~~~~~~-------~l~~~~~~~~~~~l~~~la~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (304)
T 3sg8_A 100 GVPLTPLLLN-------NLPKQSQNQAAKDLARFLSELHSINISGFKSNLVLDFREKINEDNKKIKKLLSRELKGPQMKK 172 (304)
T ss_dssp CEECCHHHHH-------TSCHHHHHHHHHHHHHHHHHHHHSCCTTSCGGGBCCHHHHHHHHHHHHHHHHTTTSCHHHHHH
T ss_pred CeECCccccc-------cCCHHHHHHHHHHHHHHHHHHHcCCCCCCCccchhhHHHHHHHHHHHHHHHhcccCCcccHHH
Confidence 9998764332 27778888889999999988885
Q ss_pred ------------------CCCeecCCCCCCeEecC--CCCeEEeccCccccc
Q 003847 595 ------------------KKHVHGNLKPRNVLLGN--DMEPKIGDFGLERLV 626 (791)
Q Consensus 595 ------------------~~ivHrDlkp~NILl~~--~~~~kL~DFGla~~~ 626 (791)
..++|+|++|.||++++ ...+.|+||+.+..-
T Consensus 173 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~iD~~~~~~~ 224 (304)
T 3sg8_A 173 VDDFYRDILENEIYFKYYPCLIHNDFSSDHILFDTEKNTICGIIDFGDAAIS 224 (304)
T ss_dssp HHHHHHHHHTCGGGTCCCCEEECSCCCGGGEEEETTTTEEEEECCCTTCEEE
T ss_pred HHHHHHHHHhccccccCCceeEeCCCCcccEEEeCCCCCEEEEEeCCCCccC
Confidence 23699999999999998 456789999998753
No 405
>2p1m_B Transport inhibitor response 1 protein; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_B* 2p1o_B* 2p1p_B* 2p1q_B* 3c6n_B* 3c6o_B* 3c6p_B*
Probab=98.89 E-value=1.1e-10 Score=135.50 Aligned_cols=175 Identities=17% Similarity=0.097 Sum_probs=95.4
Q ss_pred CcEEEEEcCCCCCccCCCcCCC-CCCCCCEEeCcCC-CCCCC-CcccccCCCCccEEEccCCcCCCCCcccc----CCCC
Q 003847 81 SRVIGLALPNSQLLGSIPADLG-MIEFLQYLDLSNN-SLNGS-LSFSLFNASQLRNLDLSNNLISGHLPETM----GSLH 153 (791)
Q Consensus 81 ~~v~~L~L~~~~l~~~~~~~~~-~l~~L~~L~L~~N-~l~~~-~p~~~~~l~~L~~L~L~~N~l~~~~p~~~----~~l~ 153 (791)
.+++.|+|++|.+++..+..+. .+++|++|+|++| .++.. ++..+.++++|++|+|++|.+++..+..+ ..++
T Consensus 105 ~~L~~L~L~~~~~~~~~~~~l~~~~~~L~~L~L~~~~~~~~~~l~~~~~~~~~L~~L~L~~~~i~~~~~~~l~~~~~~~~ 184 (594)
T 2p1m_B 105 TWLEEIRLKRMVVTDDCLELIAKSFKNFKVLVLSSCEGFSTDGLAAIAATCRNLKELDLRESDVDDVSGHWLSHFPDTYT 184 (594)
T ss_dssp TTCCEEEEESCBCCHHHHHHHHHHCTTCCEEEEESCEEEEHHHHHHHHHHCTTCCEEECTTCEEECCCGGGGGGSCTTCC
T ss_pred CCCCeEEeeCcEEcHHHHHHHHHhCCCCcEEeCCCcCCCCHHHHHHHHHhCCCCCEEeCcCCccCCcchHHHHHHhhcCC
Confidence 4566777777766655555554 5677777777776 44422 33344466777777777777665443333 3556
Q ss_pred CCCEEeCcCCc--CCC-CCccccCCCCCCCEEeCCCC-cCCCCCCCC---Ccccceecccccc-----------------
Q 003847 154 NLQLLNLSDNA--LAG-KLPVSLTTLQSLTIVSLKNN-YFSDGLPSK---FNSVQVLDLSSNL----------------- 209 (791)
Q Consensus 154 ~L~~L~ls~N~--l~~-~~p~~~~~l~~L~~L~L~~N-~l~~~~p~~---l~~L~~L~ls~N~----------------- 209 (791)
+|+.|+|++|. ++. .++..+.++++|+.|+|++| .+.+ ++.. +++|+.|+++.+.
T Consensus 185 ~L~~L~l~~~~~~~~~~~l~~l~~~~~~L~~L~L~~~~~~~~-l~~~~~~~~~L~~L~l~~~~~~~~~~~~~~l~~~l~~ 263 (594)
T 2p1m_B 185 SLVSLNISCLASEVSFSALERLVTRCPNLKSLKLNRAVPLEK-LATLLQRAPQLEELGTGGYTAEVRPDVYSGLSVALSG 263 (594)
T ss_dssp CCCEEECTTCCSCCCHHHHHHHHHHCTTCCEEECCTTSCHHH-HHHHHHHCTTCSEEECSBCCCCCCHHHHHHHHHHHHT
T ss_pred cCcEEEecccCCcCCHHHHHHHHHhCCCCcEEecCCCCcHHH-HHHHHhcCCcceEcccccccCccchhhHHHHHHHHhc
Confidence 77777777765 210 01112234567777777766 2222 3322 2456666544331
Q ss_pred ---------ccc----cCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccC
Q 003847 210 ---------ING----SLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFN 256 (791)
Q Consensus 210 ---------l~~----~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N 256 (791)
+.. .++..+.. .+|++|+|++|.+++.....+...+++|+.|+|++|
T Consensus 264 ~~~L~~Ls~~~~~~~~~l~~~~~~~~~L~~L~L~~~~l~~~~l~~~~~~~~~L~~L~l~~~ 324 (594)
T 2p1m_B 264 CKELRCLSGFWDAVPAYLPAVYSVCSRLTTLNLSYATVQSYDLVKLLCQCPKLQRLWVLDY 324 (594)
T ss_dssp CTTCCEEECCBTCCGGGGGGGHHHHTTCCEEECTTCCCCHHHHHHHHTTCTTCCEEEEEGG
T ss_pred CCCcccccCCcccchhhHHHHHHhhCCCCEEEccCCCCCHHHHHHHHhcCCCcCEEeCcCc
Confidence 111 11111111 367777777777665444444445777777777766
No 406
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.85 E-value=5.6e-10 Score=120.22 Aligned_cols=177 Identities=15% Similarity=0.128 Sum_probs=118.8
Q ss_pred CCcEEEEEcCCCCCcc-CC-------CcCCCCCCCCCEEeCcCCCCC---------CCCcccccCCCCccEEEccCCc-C
Q 003847 80 DSRVIGLALPNSQLLG-SI-------PADLGMIEFLQYLDLSNNSLN---------GSLSFSLFNASQLRNLDLSNNL-I 141 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~~-~~-------~~~~~~l~~L~~L~L~~N~l~---------~~~p~~~~~l~~L~~L~L~~N~-l 141 (791)
..+|+.|.+......| .. ...+..+++|+.|.+..+.+. +.+...+..+++|+.|+|++|. +
T Consensus 106 ~~~v~~L~lg~~~~~~~~~~~~~~~L~~s~~~l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l 185 (362)
T 2ra8_A 106 LPSLKQITIGXWGYEGEDCSDIADGIVENKEKFAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL 185 (362)
T ss_dssp GGGCSEEEECCCCSSSCCSHHHHHHHHTTHHHHTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC
T ss_pred chhcceEEEcccccCCCcHHHHHHHHHHhhhhcchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc
Confidence 4578888888766543 21 233556789999998776442 1244556678999999998883 3
Q ss_pred CCCCccccCCCCCCCEEeCcCCcCCCCCccccC--CCCCCCEEeCCC--CcCCCC---------CC-CCCcccceecccc
Q 003847 142 SGHLPETMGSLHNLQLLNLSDNALAGKLPVSLT--TLQSLTIVSLKN--NYFSDG---------LP-SKFNSVQVLDLSS 207 (791)
Q Consensus 142 ~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~--~l~~L~~L~L~~--N~l~~~---------~p-~~l~~L~~L~ls~ 207 (791)
+ ++. + .+++|+.|+|..|.+.......+. .+++|+.|+|+. |...+. +. ..+++|+.|+|++
T Consensus 186 ~--l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~ 261 (362)
T 2ra8_A 186 S--IGK-K-PRPNLKSLEIISGGLPDSVVEDILGSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVD 261 (362)
T ss_dssp B--CCS-C-BCTTCSEEEEECSBCCHHHHHHHHHSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEES
T ss_pred e--ecc-c-cCCCCcEEEEecCCCChHHHHHHHHccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCC
Confidence 2 333 3 378999999998887644333343 688999999853 222111 11 2468999999999
Q ss_pred ccccccCCCCc----CCccccEEEccCCcCcccCchhHh---hcCCCCcEEEcccCcCcc
Q 003847 208 NLINGSLPPDI----GGYSLRYLNLSYNRLSGEIPPQFG---EKIPVNATIDLSFNNLTG 260 (791)
Q Consensus 208 N~l~~~~p~~~----~~~~L~~L~l~~N~l~g~ip~~~~---~~l~~l~~l~l~~N~l~~ 260 (791)
|.+....+..+ ..++|++|+|+.|.|++.-...+. ..+++|+.|+|++|.++.
T Consensus 262 ~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~G~~~L~~~L~~l~~L~~L~L~~n~i~d 321 (362)
T 2ra8_A 262 AEEQNVVVEMFLESDILPQLETMDISAGVLTDEGARLLLDHVDKIKHLKFINMKYNYLSD 321 (362)
T ss_dssp CTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHHHHHHHHTTHHHHTTCSEEECCSBBCCH
T ss_pred CCCchHHHHHHHhCccCCCCCEEECCCCCCChHHHHHHHhhcccCCcceEEECCCCcCCH
Confidence 99874333222 235899999999999864333332 237899999999998863
No 407
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.80 E-value=1.4e-10 Score=118.51 Aligned_cols=65 Identities=31% Similarity=0.428 Sum_probs=32.0
Q ss_pred CCCCccEEEccCCcCCC--CCccccCCCCCCCEEeCcCCcCCCCCccccCCCC--CCCEEeCCCCcCCCCC
Q 003847 127 NASQLRNLDLSNNLISG--HLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQ--SLTIVSLKNNYFSDGL 193 (791)
Q Consensus 127 ~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~--~L~~L~L~~N~l~~~~ 193 (791)
++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+
T Consensus 168 ~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~ 236 (267)
T 3rw6_A 168 NIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTF 236 (267)
T ss_dssp HCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGC
T ss_pred hCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCcccc
Confidence 45555555555555554 2334444555555555555555533 1222222 5555555555555433
No 408
>3r70_A Aminoglycoside phosphotransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE ADP PE3; 1.80A {Escherichia coli} PDB: 3r6z_A* 3uzr_A* 4dca_A* 3hav_A* 3ham_A*
Probab=98.67 E-value=8e-08 Score=102.04 Aligned_cols=130 Identities=15% Similarity=0.145 Sum_probs=99.2
Q ss_pred ceeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCC----CCccceeeEEEccCceEEEEeccCC
Q 003847 480 AYILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVH----PNLVRIRGFYWGVDEKLIIYDFVPN 555 (791)
Q Consensus 480 ~~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H----~nIv~l~~~~~~~~~~~lv~e~~~~ 555 (791)
...++.|....||++ |+.+++|+..... ....+.+|.++++.+.+ -.+.+++++ +..++||||++|
T Consensus 42 v~~l~~G~~n~vy~v----g~~~vlR~~~~~~--~~~~~~~E~~~L~~L~~~~~~~~vP~v~~~----~~~~lvme~i~G 111 (320)
T 3r70_A 42 LRYLSSGDDSDTFLC----NEQYVVKVPKRDS--VRISQKRELELYRFLENCKLSYQIPAVVYQ----SDRFNIMKYIKG 111 (320)
T ss_dssp EEEEEECSSEEEEEE----TTTEEEEEESSHH--HHHHHHHHHHHHHHHTTSCCSSBCCCEEEE----CSSCEEEECCCC
T ss_pred EEeCCCCCCceEEEE----CCEEEEEeCCcHH--HHHHHHHHHHHHHHHHhcCCCCCcceEEec----CCcEEEEeecCC
Confidence 356889999999998 6778999875432 23568999999988865 224555554 567899999999
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC----------------------------------------
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK---------------------------------------- 595 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~---------------------------------------- 595 (791)
.++.+.... .++..++..++.+++..|+.||+.
T Consensus 112 ~~l~~~~~~-------~l~~~~~~~~~~~l~~~La~LH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (320)
T 3r70_A 112 ERITYEQYH-------KLSEKEKDALAYDEATFLKELHSIEIDCSVSLFSDALVNKKDKFLQDKKLLISILEKEQLLTDE 184 (320)
T ss_dssp BCCCHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCCCTTSHHHHTTBCCHHHHHHHHHHHHHHHHHHTTCCCHH
T ss_pred ccccccccc-------cCCHHHHHHHHHHHHHHHHHHhCCCcccCCCccccccccchHHHHHHHHHHHHHHhhccccccc
Confidence 998743321 267777888888888888888852
Q ss_pred -----------------------CCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 596 -----------------------KHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 596 -----------------------~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
.++|+|++|.||+++.+..+.|+||+.+..-
T Consensus 185 ~~~~~~~~~~~~l~~~~~~~~~~~~~H~D~~~~N~l~~~~~~~~~iD~~~~~~~ 238 (320)
T 3r70_A 185 MLEHIETIYENILSNAVLFKYTPCLVHNDFSANNMIFRNNRLFGVIDFGDFNVG 238 (320)
T ss_dssp HHHHHHHHHHHHHTCGGGTCCCCEEECSCCSGGGEEEETTEEEEECCCTTCEEE
T ss_pred chHHHHHHHHHHHhccccccCCceeeECCCCCCcEEEECCceEEEECCcccccC
Confidence 1399999999999998666799999998653
No 409
>2ra8_A Uncharacterized protein Q64V53_bacfr; WGR domain, LRR domain, leucine rich repeats, BFR43, structural genomics, PSI-2; 1.95A {Bacteroides fragilis}
Probab=98.64 E-value=4.7e-09 Score=112.93 Aligned_cols=173 Identities=16% Similarity=0.234 Sum_probs=116.9
Q ss_pred CCcEEEEEcCCCCCc---------cCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccC
Q 003847 80 DSRVIGLALPNSQLL---------GSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMG 150 (791)
Q Consensus 80 ~~~v~~L~L~~~~l~---------~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~ 150 (791)
..+++.|.+.++... +.+...+..+++|+.|+|++|.-. .++. + .+++|+.|+|..|.++......+.
T Consensus 138 l~~L~~L~l~~~~~e~~~is~~~~~~L~~ll~~~P~L~~L~L~g~~~l-~l~~-~-~~~~L~~L~L~~~~l~~~~l~~l~ 214 (362)
T 2ra8_A 138 FAHFEGLFWGDIDFEEQEISWIEQVDLSPVLDAMPLLNNLKIKGTNNL-SIGK-K-PRPNLKSLEIISGGLPDSVVEDIL 214 (362)
T ss_dssp HTTCSEEEECCCCTTTCCGGGCBCCBCHHHHHTCTTCCEEEEECCBTC-BCCS-C-BCTTCSEEEEECSBCCHHHHHHHH
T ss_pred cchhhheeecCcchhhcccccccccCHHHHHhcCCCCcEEEEeCCCCc-eecc-c-cCCCCcEEEEecCCCChHHHHHHH
Confidence 457888888665431 224455677899999999998311 2333 3 389999999999988744333443
Q ss_pred --CCCCCCEEeCcC--CcCCCC-----Ccccc--CCCCCCCEEeCCCCcCCCCCC------CCCcccceecccccccccc
Q 003847 151 --SLHNLQLLNLSD--NALAGK-----LPVSL--TTLQSLTIVSLKNNYFSDGLP------SKFNSVQVLDLSSNLINGS 213 (791)
Q Consensus 151 --~l~~L~~L~ls~--N~l~~~-----~p~~~--~~l~~L~~L~L~~N~l~~~~p------~~l~~L~~L~ls~N~l~~~ 213 (791)
.+++|+.|+|+. |...+. +...+ ..+++|+.|+|.+|.+.+..+ ..+++|++|+|+.|.|+..
T Consensus 215 ~~~lp~L~~L~L~~~~~~~~~~~~~~~l~~~l~~~~~p~Lr~L~L~~~~i~~~~~~~la~a~~~~~L~~LdLs~n~L~d~ 294 (362)
T 2ra8_A 215 GSDLPNLEKLVLYVGVEDYGFDGDMNVFRPLFSKDRFPNLKWLGIVDAEEQNVVVEMFLESDILPQLETMDISAGVLTDE 294 (362)
T ss_dssp HSBCTTCCEEEEECBCGGGTCCSCGGGTGGGSCTTTCTTCCEEEEESCTTHHHHHHHHHHCSSGGGCSEEECCSSCCBHH
T ss_pred HccCCCCcEEEEeccccccccchhHHHHHHHHhcCCCCCcCEEeCCCCCCchHHHHHHHhCccCCCCCEEECCCCCCChH
Confidence 789999999863 332221 11123 357999999999999875322 2458999999999999853
Q ss_pred ----CCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCc
Q 003847 214 ----LPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNN 257 (791)
Q Consensus 214 ----~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~ 257 (791)
++..+.. .+|+.|+|++|.|+...-..+...+ ...++++.|+
T Consensus 295 G~~~L~~~L~~l~~L~~L~L~~n~i~d~~~~~l~~al--g~~~~~~~~~ 341 (362)
T 2ra8_A 295 GARLLLDHVDKIKHLKFINMKYNYLSDEMKKELQKSL--PMKIDVSDSQ 341 (362)
T ss_dssp HHHHHHTTHHHHTTCSEEECCSBBCCHHHHHHHHHHC--CSEEECCSBC
T ss_pred HHHHHHhhcccCCcceEEECCCCcCCHHHHHHHHHHc--CCEEEecCCc
Confidence 3333222 5899999999999855444443323 3568888887
No 410
>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*
Probab=98.53 E-value=6.3e-07 Score=94.36 Aligned_cols=133 Identities=18% Similarity=0.171 Sum_probs=95.3
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCC---CccceeeEEE-ccCceEEEEeccCCC
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHP---NLVRIRGFYW-GVDEKLIIYDFVPNG 556 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~-~~~~~~lv~e~~~~g 556 (791)
..++.|....||+. |..++||+-.. ......+.+|+++|+.+.+. .+.+.+.+.. ..+..++||||++|.
T Consensus 25 ~~l~~G~~n~v~~v----g~~~VlR~~~~--~~~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~~~~~g~~~~v~e~i~G~ 98 (306)
T 3tdw_A 25 ESLGEGFRNYAILV----NGDWVFRFPKS--QQGADELNKEIQLLPLLVGCVKVNIPQYVYIGKRSDGNPFVGYRKVQGQ 98 (306)
T ss_dssp EEEEECSSEEEEEE----TTTEEEEEESS--HHHHHHHHHHHHHHHHHTTTCSSBCCCEEEEEECTTSCEEEEEECCCSE
T ss_pred eecCCCcceeEEEE----CCEEEEEecCC--chHHHHHHHHHHHHHHHHhcCCCCCCCeEeecccCCCceEEEEeccCCe
Confidence 35678888899988 57788898532 23346789999999999753 3567777764 445678999999998
Q ss_pred ChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc------------------------------------------
Q 003847 557 SLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE------------------------------------------ 594 (791)
Q Consensus 557 sL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~------------------------------------------ 594 (791)
++.+.... .++..+...++.++++.|+.||+
T Consensus 99 ~l~~~~~~-------~l~~~~~~~~~~~lg~~La~LH~~~~~~~~~~g~p~~~w~~~~~~~~~~~~~~~~~~l~~~~~~~ 171 (306)
T 3tdw_A 99 ILGEDGMA-------VLPDDAKDRLALQLAEFMNELSAFPVETAISAGVPVTNLKNKILLLSEAVEDQVFPLLDESLRDY 171 (306)
T ss_dssp ECHHHHHT-------TSCHHHHHHHHHHHHHHHHHHHHSCHHHHHHTTCCBCCHHHHHHHHHHHHHHHTGGGSCHHHHHH
T ss_pred ECchhhhh-------hCCHHHHHHHHHHHHHHHHHHhcCCcccccccCCChHHHHHHHHHHHHHHHHhcccccchhhHHH
Confidence 88763221 14555555666666666666654
Q ss_pred ------------------CCCeecCCCCCCeEecC---CCC-eEEeccCccccc
Q 003847 595 ------------------KKHVHGNLKPRNVLLGN---DME-PKIGDFGLERLV 626 (791)
Q Consensus 595 ------------------~~ivHrDlkp~NILl~~---~~~-~kL~DFGla~~~ 626 (791)
..++|+|++|.||+++. ++. +.|+||+.+..-
T Consensus 172 l~~~~~~~l~~~~~~~~~~~~~HgD~~~~N~l~~~~~~~~~~~~~iD~~~a~~g 225 (306)
T 3tdw_A 172 LTLRFQSYMTHPVYTRYTPRLIHGDLSPDHFLTNLNSRQTPLTGIIDFGDAAIS 225 (306)
T ss_dssp HHHHHHHHHHCHHHHCCCCEEECSCCSGGGEEECTTCSSCCEEEECCCTTCEEE
T ss_pred HHHHHHHHHhCcccccCCCeeEeCCCCcccEEEecCCCCCceEEEEehhhcCCC
Confidence 23599999999999987 455 489999987753
No 411
>3d1u_A Putative fructosamine-3-kinase; YP_290396.1, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 1.85A {Thermobifida fusca} PDB: 3f7w_A
Probab=98.46 E-value=7.5e-07 Score=92.73 Aligned_cols=74 Identities=18% Similarity=0.238 Sum_probs=59.9
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCC---CccceeeEEEccCceEEEEeccCCCC
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHP---NLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
+.||.|.++.||++...+|+.++||+...........+..|++.|+.+.+. .+++++++. ..++||||++++.
T Consensus 21 ~~l~gG~~n~vy~v~~~dG~~~vvK~~~~~~~~~~~~~~~E~~~L~~L~~~~~v~vP~v~~~~----~~~lvme~l~g~~ 96 (288)
T 3d1u_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGWD----DRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEEE----TTEEEEECCCCCC
T ss_pred eeeCCcchhheEEEEeCCCCeEEEEecCCCCcchhHHHHHHHHHHHHHHhcCCCCcCeEEEec----CcEEEEEecccCC
Confidence 468999999999999888999999997544332335789999999999765 577887763 4689999999987
Q ss_pred h
Q 003847 558 L 558 (791)
Q Consensus 558 L 558 (791)
+
T Consensus 97 ~ 97 (288)
T 3d1u_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 5
No 412
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.43 E-value=1.9e-08 Score=97.59 Aligned_cols=94 Identities=16% Similarity=0.171 Sum_probs=58.8
Q ss_pred CcCCCCCCCCCEEeCcCC-CCCCC----CcccccCCCCccEEEccCCcCCCC----CccccCCCCCCCEEeCcCCcCCCC
Q 003847 98 PADLGMIEFLQYLDLSNN-SLNGS----LSFSLFNASQLRNLDLSNNLISGH----LPETMGSLHNLQLLNLSDNALAGK 168 (791)
Q Consensus 98 ~~~~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~ls~N~l~~~ 168 (791)
...+...+.|++|+|++| .|... +...+...++|++|+|++|+|... +...+...++|++|+|++|.|...
T Consensus 29 ~~~l~~~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~ 108 (185)
T 1io0_A 29 KRIQNNDPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGS 108 (185)
T ss_dssp HHHHTTCTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHH
T ss_pred HHHHhcCCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHH
Confidence 344566677777777777 77632 334455567777777777777631 334445556777777777777632
Q ss_pred ----CccccCCCCCCCEEeC--CCCcCCC
Q 003847 169 ----LPVSLTTLQSLTIVSL--KNNYFSD 191 (791)
Q Consensus 169 ----~p~~~~~l~~L~~L~L--~~N~l~~ 191 (791)
+...+...++|++|+| ++|.|..
T Consensus 109 g~~~l~~~L~~n~~L~~L~L~~~~N~i~~ 137 (185)
T 1io0_A 109 GILALVEALQSNTSLIELRIDNQSQPLGN 137 (185)
T ss_dssp HHHHHHHGGGGCSSCCEEECCCCSSCCCH
T ss_pred HHHHHHHHHHhCCCceEEEecCCCCCCCH
Confidence 3445556666777777 6666654
No 413
>3rw6_A Nuclear RNA export factor 1; retroviral constitutive transport element (CTE), RNA recogni motif (RRM); HET: GTP CCC; 2.30A {Homo sapiens} PDB: 3rw7_A 1koo_A 1koh_A 1ft8_A 1fo1_A
Probab=98.40 E-value=1.3e-07 Score=96.50 Aligned_cols=80 Identities=26% Similarity=0.284 Sum_probs=64.9
Q ss_pred CCCCCCCEEeCcCCCCCC--CCcccccCCCCccEEEccCCcCCCCCccccCCCC--CCCEEeCcCCcCCCCCcc------
Q 003847 102 GMIEFLQYLDLSNNSLNG--SLSFSLFNASQLRNLDLSNNLISGHLPETMGSLH--NLQLLNLSDNALAGKLPV------ 171 (791)
Q Consensus 102 ~~l~~L~~L~L~~N~l~~--~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~--~L~~L~ls~N~l~~~~p~------ 171 (791)
.++++|+.|+|++|+|++ .+|..+..+++|+.|+|++|+|++. ..+..+. +|++|+|++|.+.+.+|.
T Consensus 167 ~~l~~L~~L~Ls~N~l~~l~~l~~~~~~l~~L~~L~Ls~N~i~~~--~~l~~l~~l~L~~L~L~~Npl~~~~~~~~~y~~ 244 (267)
T 3rw6_A 167 ENIPELLSLNLSNNRLYRLDDMSSIVQKAPNLKILNLSGNELKSE--RELDKIKGLKLEELWLDGNSLCDTFRDQSTYIS 244 (267)
T ss_dssp HHCTTCCEEECTTSCCCCCGGGTTHHHHSTTCCEEECTTSCCCSG--GGGGGGTTSCCSEEECTTSTTGGGCSSHHHHHH
T ss_pred hhCCCCCEEECCCCCCCCCccchhHHhhCCCCCEEECCCCccCCc--hhhhhcccCCcceEEccCCcCccccCcchhHHH
Confidence 357899999999999998 4567788999999999999999965 3344444 999999999999987763
Q ss_pred -ccCCCCCCCEEe
Q 003847 172 -SLTTLQSLTIVS 183 (791)
Q Consensus 172 -~~~~l~~L~~L~ 183 (791)
.+..+++|+.||
T Consensus 245 ~il~~~P~L~~LD 257 (267)
T 3rw6_A 245 AIRERFPKLLRLD 257 (267)
T ss_dssp HHHHHCTTCCEES
T ss_pred HHHHHCcccCeEC
Confidence 356677777775
No 414
>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*
Probab=98.39 E-value=1.9e-06 Score=88.91 Aligned_cols=132 Identities=15% Similarity=0.140 Sum_probs=94.7
Q ss_pred ccccCce-EEEEEEeC-CCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEeccCCCChh
Q 003847 483 LGASGSS-IMYKAVLE-DGTALAVRRIGENSVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYDFVPNGSLA 559 (791)
Q Consensus 483 lG~G~~g-~Vy~~~~~-~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~ 559 (791)
+..|..+ .||+.... ++..++||+-... ....+.+|...|+.+. +--+.++++++.+.+..++|||+++|.++.
T Consensus 32 ~~~G~S~~~v~rl~~~~~~~~~~lk~~~~~---~~~~~~~E~~~l~~l~~~vPVP~v~~~~~~~~~~~lvme~l~G~~~~ 108 (272)
T 4gkh_A 32 DNVGQSGATIYRLYGKPNAPELFLKHGKGS---VANDVTDEMVRLNWLTAFMPLPTIKHFIRTPDDAWLLTTAIPGKTAF 108 (272)
T ss_dssp EECSSSSCEEEEEECCTTCCCEEEEEEETH---HHHHHHHHHHHHHHHTTTSCCCCEEEEEEETTEEEEEEECCCSEEHH
T ss_pred ccCCCcCCeEEEEEecCCCeEEEEEECCCC---CHhHHHHHHHHHHHhccCCCcCeEEEEEEECCeEEEEEEeeCCcccc
Confidence 3344444 68988754 4678999986543 2356888999998884 334778899998889999999999998887
Q ss_pred HHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcC--------------------------------------------
Q 003847 560 NARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEK-------------------------------------------- 595 (791)
Q Consensus 560 ~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~-------------------------------------------- 595 (791)
+...... .....++.+++..|..||+.
T Consensus 109 ~~~~~~~---------~~~~~~~~~l~~~L~~Lh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (272)
T 4gkh_A 109 QVLEEYP---------DSGENIVDALAVFLRRLHSIPVCNCPFNSDRVFRLAQAQSRMNNGLVDASDFDDERNGWPVEQV 179 (272)
T ss_dssp HHHHHCG---------GGHHHHHHHHHHHHHHHHTSCGGGCCBBCCHHHHHHHHHHHHHTTCCCGGGCCGGGTTCCHHHH
T ss_pred ccccCCH---------HHHHHHHHHHHHHHHHhcCCCcccCCcCcccccchhhHHHHHHHhhhhhhhccccccchHHHHH
Confidence 6543211 12234555566666666531
Q ss_pred --------------CCeecCCCCCCeEecCCCCeEEeccCccccc
Q 003847 596 --------------KHVHGNLKPRNVLLGNDMEPKIGDFGLERLV 626 (791)
Q Consensus 596 --------------~ivHrDlkp~NILl~~~~~~kL~DFGla~~~ 626 (791)
.++|+|+.+.|||++.++.+-|+||+.+..-
T Consensus 180 ~~~l~~~~~~~~~~~l~HGDl~~~Nil~~~~~~~~viDwe~a~~g 224 (272)
T 4gkh_A 180 WKEMHKLLPFSPDSVVTHGDFSLDNLIFDEGKLIGCIDVGRVGIA 224 (272)
T ss_dssp HHHHHTTCCCCCCEEEECSCCCTTSEEEETTEEEEECCCTTCEEE
T ss_pred HHHHHhcccccCCcEEEcCCCCCCeEEEECCeEEEEEECcccccC
Confidence 1689999999999998777789999998753
No 415
>3ovc_A Hygromycin-B 4-O-kinase; aminoglycoside phosphotransferase, structural genomics, PSI- protein structure initiative; HET: HY0 PE4; 1.95A {Escherichia coli} PDB: 3tyk_A*
Probab=98.32 E-value=1.4e-06 Score=93.84 Aligned_cols=73 Identities=11% Similarity=0.008 Sum_probs=56.2
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCC--ccceeeEEEcc-CceEEEEeccCCCC
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPN--LVRIRGFYWGV-DEKLIIYDFVPNGS 557 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~~~~~-~~~~lv~e~~~~gs 557 (791)
..++.|....+|+... +|+.++||+.... ..+..|+.+++.+.... +.++++++... +..|+||||++|.+
T Consensus 47 ~~l~gG~~n~~y~v~~-~g~~~vlK~~~~~-----~~~~~E~~~l~~L~~~gvpvP~vl~~~~~~~g~~~lv~e~l~G~~ 120 (362)
T 3ovc_A 47 MQLSEGEESRAFSFDV-GGRGYVLRVNSCA-----DGFYKDRYVYRHFASAALPIPEVLDIGEFSESLTYCISRRAQGVT 120 (362)
T ss_dssp EEEEECSSEEEEEEEE-TTEEEEEEEESCC-----HHHHHHHHHHHHHCCSSSCCCCEEEEEESSSSCEEEEEECCCSEE
T ss_pred EECCCCCcceEEEEEE-CCcEEEEEeCCch-----hhHHHHHHHHHHHHhcCCCCceEEEeccCCCCCeEEEEEecCCCC
Confidence 4578899999999886 5789999987543 25888999999886544 56777777664 56899999999876
Q ss_pred hh
Q 003847 558 LA 559 (791)
Q Consensus 558 L~ 559 (791)
+.
T Consensus 121 l~ 122 (362)
T 3ovc_A 121 LQ 122 (362)
T ss_dssp TT
T ss_pred cc
Confidence 64
No 416
>1io0_A Tropomodulin; LRR protein, right-handed super-helix, protein binding; 1.45A {Gallus gallus} SCOP: c.10.1.1
Probab=98.30 E-value=5.6e-08 Score=94.30 Aligned_cols=111 Identities=19% Similarity=0.220 Sum_probs=87.0
Q ss_pred CCcEEEEEcCCC-CCccC----CCcCCCCCCCCCEEeCcCCCCCCC----CcccccCCCCccEEEccCCcCCCC----Cc
Q 003847 80 DSRVIGLALPNS-QLLGS----IPADLGMIEFLQYLDLSNNSLNGS----LSFSLFNASQLRNLDLSNNLISGH----LP 146 (791)
Q Consensus 80 ~~~v~~L~L~~~-~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p 146 (791)
...++.|+|++| +|... +...+...++|++|+|++|.|... +...+...++|++|+|++|.|+.. +.
T Consensus 35 ~~~L~~L~L~~n~~i~~~g~~~l~~~L~~~~~L~~L~Ls~n~i~~~g~~~l~~~L~~n~~L~~L~L~~N~i~~~g~~~l~ 114 (185)
T 1io0_A 35 DPDLEEVNLNNIMNIPVPTLKACAEALKTNTYVKKFSIVGTRSNDPVAFALAEMLKVNNTLKSLNVESNFISGSGILALV 114 (185)
T ss_dssp CTTCCEEECTTCTTCCHHHHHHHHHHHTTCCSCCEEECTTSCCCHHHHHHHHHHHHHCSSCCEEECCSSCCCHHHHHHHH
T ss_pred CCCCCEEEecCCCCCCHHHHHHHHHHHHhCCCcCEEECcCCCCChHHHHHHHHHHHhCCCcCEEECcCCcCCHHHHHHHH
Confidence 468999999999 88642 445677789999999999999743 344555668999999999999843 46
Q ss_pred cccCCCCCCCEEeC--cCCcCCCC----CccccCCCCCCCEEeCCCCcCC
Q 003847 147 ETMGSLHNLQLLNL--SDNALAGK----LPVSLTTLQSLTIVSLKNNYFS 190 (791)
Q Consensus 147 ~~~~~l~~L~~L~l--s~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~ 190 (791)
..+...++|++|+| ++|.|... +...+...++|++|+|++|.+.
T Consensus 115 ~~L~~n~~L~~L~L~~~~N~i~~~g~~~l~~~L~~n~~L~~L~L~~n~i~ 164 (185)
T 1io0_A 115 EALQSNTSLIELRIDNQSQPLGNNVEMEIANMLEKNTTLLKFGYHFTQQG 164 (185)
T ss_dssp HGGGGCSSCCEEECCCCSSCCCHHHHHHHHHHHHHCSSCCEEECCCSSHH
T ss_pred HHHHhCCCceEEEecCCCCCCCHHHHHHHHHHHHhCCCcCEEeccCCCCC
Confidence 66788889999999 88999843 3344555678888888888775
No 417
>3ats_A Putative uncharacterized protein; hypothetical protein, putative aminoglycoside phosphortransf transferase; 1.67A {Mycobacterium tuberculosis} PDB: 3att_A*
Probab=98.23 E-value=1.2e-06 Score=94.48 Aligned_cols=79 Identities=15% Similarity=-0.000 Sum_probs=55.8
Q ss_pred eec-cccCceEEEEEEeC-------CCcEEEEEEcCCCc---hhhHHHHHHHHHHHhccC-C--CCccceeeEEEcc---
Q 003847 481 YIL-GASGSSIMYKAVLE-------DGTALAVRRIGENS---VDRFRDFETQVRVIAKLV-H--PNLVRIRGFYWGV--- 543 (791)
Q Consensus 481 ~~l-G~G~~g~Vy~~~~~-------~g~~vavK~~~~~~---~~~~~~~~~E~~~l~~l~-H--~nIv~l~~~~~~~--- 543 (791)
+.| +.|....+|+.... +++.+++|+..... ......+.+|+++++.+. + -.+.+++.++.+.
T Consensus 26 ~~l~~~G~~n~~y~v~~~~~~~~~~~~~~~vlR~~~~~~~~~~~~~~~~~~E~~~l~~L~~~~~vpvP~v~~~~~~~~~~ 105 (357)
T 3ats_A 26 SGVDSTGMSSETIILTARWQQDGRSIQQKLVARVAPAAEDVPVFPTYRLDHQFEVIRLVGELTDVPVPRVRWIETTGDVL 105 (357)
T ss_dssp EEECTTSSEEEEEEEEEEEEETTEEEEEEEEEEECCCGGGCCSSSCCCHHHHHHHHHHHHHHCCSCCCCEEEEECSSTTT
T ss_pred EECCCCCccceEEEEEEecccCCCCCCceEEEEeCCCCCccccCchhHHHHHHHHHHHHhhcCCCCCCcEEEEccCCCcc
Confidence 356 78889999998764 26789999875432 101245788888888884 3 3577888877655
Q ss_pred CceEEEEeccCCCChh
Q 003847 544 DEKLIIYDFVPNGSLA 559 (791)
Q Consensus 544 ~~~~lv~e~~~~gsL~ 559 (791)
+..++||||++|..+.
T Consensus 106 g~~~~v~e~l~G~~l~ 121 (357)
T 3ats_A 106 GTPFFLMDYVEGVVPP 121 (357)
T ss_dssp SSCEEEEECCCCBCCC
T ss_pred CCceEEEEecCCCChh
Confidence 3568999999987654
No 418
>2q83_A YTAA protein; 2635576, structural genomics, joint center for structu genomics, JCSG, protein structure initiative, PSI-2, transf; HET: ADN CIT UNL; 2.50A {Bacillus subtilis}
Probab=98.06 E-value=4.2e-05 Score=81.52 Aligned_cols=139 Identities=14% Similarity=0.148 Sum_probs=80.6
Q ss_pred eccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC--CCCccceee------EEEccCceEEEEecc
Q 003847 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV--HPNLVRIRG------FYWGVDEKLIIYDFV 553 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~--H~nIv~l~~------~~~~~~~~~lv~e~~ 553 (791)
.|+.|..+.||++...+| .+++|+.... . .++..|+++++.+. .-.+.+++. +....+..++||||+
T Consensus 39 ~l~gG~~n~~~~v~~~~~-~~vlk~~~~~-~---~~~~~e~~~l~~L~~~g~~vp~~~~~~~g~~~~~~~~~~~~l~~~i 113 (346)
T 2q83_A 39 VIQGNQMALVWKVHTDSG-AVCLKRIHRP-E---KKALFSIFAQDYLAKKGMNVPGILPNKKGSLYSKHGSFLFVVYDWI 113 (346)
T ss_dssp ECC----CEEEEEEETTE-EEEEEEECSC-H---HHHHHHHHHHHHHHHHTCSSCCBCCCTTSCSCEEETTEEEEEEECC
T ss_pred eccccccCcEEEEEeCCC-CEEEEecCCC-H---HHHHHHHHHHHHHHHcCCCCCceeecCCCCEEEEECCEEEEEEEee
Confidence 456677899999987655 4899998763 1 33444555555542 112333433 123456778999999
Q ss_pred CCCChh--------------HHHHhhcCCC--C-------CCCCHHHH-------------------------------H
Q 003847 554 PNGSLA--------------NARYRKMGSS--P-------CHLPWEAR-------------------------------L 579 (791)
Q Consensus 554 ~~gsL~--------------~~l~~~~~~~--~-------~~l~~~~~-------------------------------~ 579 (791)
+|..+. ..++...... + ..-.|... .
T Consensus 114 ~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 193 (346)
T 2q83_A 114 EGRPFELTVKQDLEFIMKGLADFHTASVGYQPPNGVPIFTKLGRWPNHYTKRCKQMETWKLMAEAEKEDPFSQLYLQEID 193 (346)
T ss_dssp CCBCCCTTSHHHHHHHHHHHHHHHHHHTTCCCCTTCCCCBCTTCHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred cCccCCCCCHHHHHHHHHHHHHHHHhCCCCCCCccchhcccccchHHHHHHHHHHHHHHHHHHHhccCCcHHHHHHHHHH
Confidence 986542 1122221110 0 00123211 1
Q ss_pred HHHHHHHHHHHHHh-------------cCCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 580 KIAKGVARGLAFLH-------------EKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 580 ~i~~qi~~gL~yLH-------------~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
.+..++..++++|+ ...++|+|+++.||+++.++.+.|+||+.+..
T Consensus 194 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~lIDfe~a~~ 252 (346)
T 2q83_A 194 GFIEDGLRIKDRLLQSTYVPWTEQLKKSPNLCHQDYGTGNTLLGENEQIWVIDLDTVSF 252 (346)
T ss_dssp HHHHHHHHHHHHHHHTTHHHHHHHHHHSCCEECSSCSTTSEEECGGGCEEECCCTTCEE
T ss_pred HHHHHHHHHHHHHHhchHHHHHHhccccCceecCCCCcccEEEeCCCcEEEEehhhccc
Confidence 11223444566665 36799999999999998888899999998764
No 419
>2olc_A MTR kinase, methylthioribose kinase; kinase ADP-2HO complex, transferase; HET: CPS ADP; 2.00A {Bacillus subtilis} SCOP: d.144.1.6 PDB: 2pu8_A* 2pui_A* 2pul_A* 2pun_A* 2pup_A*
Probab=98.04 E-value=1.5e-05 Score=87.07 Aligned_cols=74 Identities=7% Similarity=0.075 Sum_probs=49.2
Q ss_pred eeccccCceEEEEEEeC-CCcEEEEEEcCCCch-------hhHHHHHHHHHHHhccCC--CC-ccceeeEEEccCceEEE
Q 003847 481 YILGASGSSIMYKAVLE-DGTALAVRRIGENSV-------DRFRDFETQVRVIAKLVH--PN-LVRIRGFYWGVDEKLII 549 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~-~g~~vavK~~~~~~~-------~~~~~~~~E~~~l~~l~H--~n-Iv~l~~~~~~~~~~~lv 549 (791)
+.||.|..+.||++... +++.|+||....... .....+..|.++++.+.. +. +.+++.+ +.+..++|
T Consensus 36 ~~lg~G~~n~vyrv~~~~~~~~~vvK~~~~~~r~~~~~~~~~~~r~~~E~~~L~~l~~~~~~~vP~~~~~--d~~~~~lv 113 (397)
T 2olc_A 36 QEIGDGNLNYVFHIYDQEHDRALIIKQAVPYAKVVGESWPLTIDRARIESSALIRQGEHVPHLVPRVFYS--DTEMAVTV 113 (397)
T ss_dssp EECCSSSSEEEEEEEC----CEEEEEEECCC-------CCCCTTHHHHHHHHHHHHHTTCGGGSCCEEEE--ETTTTEEE
T ss_pred EECCCCceEEEEEEEECCCCcEEEEEecchhhcccCCCCcCcHHHHHHHHHHHHHhhhhCCCCcCeEEEE--cCCccEEE
Confidence 47899999999999754 468899998653211 123456778888887742 33 4455543 44567899
Q ss_pred EeccCCC
Q 003847 550 YDFVPNG 556 (791)
Q Consensus 550 ~e~~~~g 556 (791)
|||+++.
T Consensus 114 mE~l~g~ 120 (397)
T 2olc_A 114 MEDLSHL 120 (397)
T ss_dssp ECCCTTS
T ss_pred EEeCCCc
Confidence 9999764
No 420
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.84 E-value=0.00014 Score=79.24 Aligned_cols=182 Identities=11% Similarity=0.063 Sum_probs=105.6
Q ss_pred eeeCCCCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCC---
Q 003847 69 VTCASPGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHL--- 145 (791)
Q Consensus 69 v~C~~~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~--- 145 (791)
|+=.....|.+...++.+.|.+ +++.+-..+|.++++|+.++|.+| ++..-...|.++.+|+.+.+..+- ...-
T Consensus 59 VtsIg~~AF~~c~~L~~i~lp~-~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~c~~L~~i~~p~~l-~~i~~~a 135 (394)
T 4fs7_A 59 VVSIGYAAFQGCRKVTEIKIPS-TVREIGEFAFENCSKLEIINIPDS-VKMIGRCTFSGCYALKSILLPLML-KSIGVEA 135 (394)
T ss_dssp EEEECTTTTTTCTTEEEEECCT-TCCEECTTTTTTCTTCCEECCCTT-CCEECTTTTTTCTTCCCCCCCTTC-CEECTTT
T ss_pred EeEhHHHHhhCCCCceEEEeCC-CccCcchhHhhCCCCCcEEEeCCC-ceEccchhhcccccchhhcccCce-eeeccee
Confidence 4444556777888999999974 477666788999999999999865 554556678888888887776542 2122
Q ss_pred -------------------ccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCC---ccccee
Q 003847 146 -------------------PETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVL 203 (791)
Q Consensus 146 -------------------p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L 203 (791)
...|.++++|+.+.|.++..+ .....|.++.+|+.+.+..| ++......| ..|+.+
T Consensus 136 F~~~~~~~~~~~~~~~~i~~~aF~~c~~L~~i~l~~~~~~-I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i 213 (394)
T 4fs7_A 136 FKGCDFKEITIPEGVTVIGDEAFATCESLEYVSLPDSMET-LHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENM 213 (394)
T ss_dssp TTTCCCSEEECCTTCCEECTTTTTTCTTCCEEECCTTCCE-ECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBC
T ss_pred eecccccccccCccccccchhhhcccCCCcEEecCCccce-eccccccCCCCceEEEcCCC-ceEeCchhhcccccccee
Confidence 233555666666666544322 44455666666666666554 222112222 445555
Q ss_pred ccccccccccCCCCcCCccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcC
Q 003847 204 DLSSNLINGSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNL 258 (791)
Q Consensus 204 ~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l 258 (791)
.+..+... .-...+...+|+.+.+..+ ++ .|....+..+..|+.+.+..|..
T Consensus 214 ~~~~~~~~-i~~~~~~~~~l~~i~ip~~-~~-~i~~~~f~~~~~l~~~~~~~~~~ 265 (394)
T 4fs7_A 214 EFPNSLYY-LGDFALSKTGVKNIIIPDS-FT-ELGKSVFYGCTDLESISIQNNKL 265 (394)
T ss_dssp CCCTTCCE-ECTTTTTTCCCCEEEECTT-CC-EECSSTTTTCSSCCEEEECCTTC
T ss_pred ecCCCceE-eehhhcccCCCceEEECCC-ce-ecccccccccccceeEEcCCCcc
Confidence 55554332 1122222345666665433 22 34444444466666666665543
No 421
>4fs7_A Uncharacterized protein; leucine-rich repeats, protein binding, extracellular protein structural genomics; HET: MSE; 1.19A {Bacteroides ovatus}
Probab=97.76 E-value=9.9e-05 Score=80.44 Aligned_cols=177 Identities=14% Similarity=0.080 Sum_probs=98.3
Q ss_pred CCCCCCCCcEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCC-----------
Q 003847 74 PGEGNNDSRVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLIS----------- 142 (791)
Q Consensus 74 ~~~~~~~~~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~----------- 142 (791)
...|.....++.+.|.++ +..+-...|.++.+|+.++|..| ++......|.++..|+.+.+..+...
T Consensus 155 ~~aF~~c~~L~~i~l~~~-~~~I~~~~F~~c~~L~~i~l~~~-~~~I~~~~F~~~~~L~~i~~~~~~~~i~~~~~~~~~l 232 (394)
T 4fs7_A 155 DEAFATCESLEYVSLPDS-METLHNGLFSGCGKLKSIKLPRN-LKIIRDYCFAECILLENMEFPNSLYYLGDFALSKTGV 232 (394)
T ss_dssp TTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCBCCCCTT-CCEECTTTTTTCTTCCBCCCCTTCCEECTTTTTTCCC
T ss_pred hhhhcccCCCcEEecCCc-cceeccccccCCCCceEEEcCCC-ceEeCchhhccccccceeecCCCceEeehhhcccCCC
Confidence 345666778888888755 44455677888889999888776 44344556666666666665544321
Q ss_pred ----------CCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCCCCCCCCCcccceeccccccccc
Q 003847 143 ----------GHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFSDGLPSKFNSVQVLDLSSNLING 212 (791)
Q Consensus 143 ----------~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~l~~L~~L~ls~N~l~~ 212 (791)
..-...|.++.+|+.+.+..|... .....|.++..|+.+.+..+.+.........+|+.+.+.+| ++.
T Consensus 233 ~~i~ip~~~~~i~~~~f~~~~~l~~~~~~~~~~~-i~~~~F~~~~~l~~~~~~~~~i~~~~F~~~~~L~~i~l~~~-i~~ 310 (394)
T 4fs7_A 233 KNIIIPDSFTELGKSVFYGCTDLESISIQNNKLR-IGGSLFYNCSGLKKVIYGSVIVPEKTFYGCSSLTEVKLLDS-VKF 310 (394)
T ss_dssp CEEEECTTCCEECSSTTTTCSSCCEEEECCTTCE-ECSCTTTTCTTCCEEEECSSEECTTTTTTCTTCCEEEECTT-CCE
T ss_pred ceEEECCCceecccccccccccceeEEcCCCcce-eeccccccccccceeccCceeeccccccccccccccccccc-cce
Confidence 112233445555666655555433 34444555555555555444433322333355666666544 432
Q ss_pred cCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEcccC
Q 003847 213 SLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFN 256 (791)
Q Consensus 213 ~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N 256 (791)
.-...|.+ .+|+.++|.++ ++ .|....|..+.+|+.+++..|
T Consensus 311 I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~c~~L~~i~lp~~ 353 (394)
T 4fs7_A 311 IGEEAFESCTSLVSIDLPYL-VE-EIGKRSFRGCTSLSNINFPLS 353 (394)
T ss_dssp ECTTTTTTCTTCCEECCCTT-CC-EECTTTTTTCTTCCEECCCTT
T ss_pred echhhhcCCCCCCEEEeCCc-cc-EEhHHhccCCCCCCEEEECcc
Confidence 33334444 45666666533 44 555555555666666666554
No 422
>3f7w_A Putative fructosamine-3-kinase; YP_290396.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI-2; 1.85A {Thermobifida fusca YX}
Probab=97.66 E-value=9.6e-05 Score=76.77 Aligned_cols=74 Identities=19% Similarity=0.271 Sum_probs=55.1
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCC---CccceeeEEEccCceEEEEeccCCCC
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHP---NLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~---nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
.-+|.|..+.||+.+..+|+.|+||+...........|+.|++.|+.|.-. -+.+++++ +..++||||++++.
T Consensus 21 ~~~g~G~~~~vyrv~l~DG~~~~vK~~~~~~~~~~~~~~~Ea~~L~~L~~~~~vpvP~v~~~----~~~~lv~e~l~~~~ 96 (288)
T 3f7w_A 21 AERGHSHRWHLYRVELADGTPLFVKALPDDAPALDGLFRAEALGLDWLGRSFGSPVPQVAGW----DDRTLAMEWVDERP 96 (288)
T ss_dssp EEEEEETTEEEEEEEETTSCEEEEEECCTTCCCCTTHHHHHHHHHHHHTCSTTCCSCCEEEE----ETTEEEEECCCCCC
T ss_pred EecCCCCCeEEEEEEECCCCEEEEEEeCCCCcchhhHHHHHHHHHHHHHhhCCCCcceEEec----cCceEEEEeecccC
Confidence 457999999999999999999999997655443335688999999888422 34555554 23478999998765
Q ss_pred h
Q 003847 558 L 558 (791)
Q Consensus 558 L 558 (791)
.
T Consensus 97 ~ 97 (288)
T 3f7w_A 97 P 97 (288)
T ss_dssp C
T ss_pred C
Confidence 4
No 423
>2pyw_A Uncharacterized protein; 5-methylthioribose kinase, plant methionine recycling, refol transferase; HET: SR1 ADP; 1.90A {Arabidopsis thaliana}
Probab=97.61 E-value=0.00024 Score=78.12 Aligned_cols=72 Identities=15% Similarity=0.148 Sum_probs=45.4
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCC------c-h--hhHHHHHHHHHHHh-ccCCCCccceeeEEEccCceEEEE
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGEN------S-V--DRFRDFETQVRVIA-KLVHPNLVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~------~-~--~~~~~~~~E~~~l~-~l~H~nIv~l~~~~~~~~~~~lv~ 550 (791)
+.||.|..+.||++.. +++.++||..... . . .....++.|+..+. ......+.+++.+. .+..++||
T Consensus 40 ~~l~~G~~n~vyrv~~-~~~~~vvK~~~p~~~~~~~~~~~~~~~~~~E~e~l~~~~~~~~~~vP~v~~~~--~~~~~lv~ 116 (420)
T 2pyw_A 40 KEVGDGNLNFVFIVVG-SSGSLVIKQALPYIRCIGESWPMTKERAYFEATTLRKHGNLSPDHVPEVYHFD--RTMALIGM 116 (420)
T ss_dssp EECCCSSSCEEEEEEC-SSCEEEEEECCSBCTTTCTTSBCCTTHHHHHHHHHHHHHHHSGGGSCCEEEEE--TTTTEEEE
T ss_pred EEccCCCcEEEEEEEc-CCceEEEEECchhhcccCcccccchhHHHHHHHHHHHHHhhCCCCCCeEEEEC--CCccEEEE
Confidence 4688899999999965 4678999943211 0 0 02234444544332 22334567777665 56779999
Q ss_pred ecc-CC
Q 003847 551 DFV-PN 555 (791)
Q Consensus 551 e~~-~~ 555 (791)
||+ ++
T Consensus 117 e~l~~g 122 (420)
T 2pyw_A 117 RYLEPP 122 (420)
T ss_dssp CCCCTT
T ss_pred eecCCc
Confidence 999 76
No 424
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.58 E-value=0.00013 Score=79.51 Aligned_cols=137 Identities=9% Similarity=0.154 Sum_probs=87.0
Q ss_pred CCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCcc
Q 003847 92 QLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPV 171 (791)
Q Consensus 92 ~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~ 171 (791)
++..+-..+|.++..|+.+.+.++..+ .....|.++++|+.+.+. +.++..-...|.++.+|+.++|..| ++.+-..
T Consensus 252 ~v~~i~~~aF~~c~~L~~i~lp~~~~~-I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~~I~~~ 328 (394)
T 4gt6_A 252 GVARIETHAFDSCAYLASVKMPDSVVS-IGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-ITQILDD 328 (394)
T ss_dssp TEEEECTTTTTTCSSCCEEECCTTCCE-ECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CCEECTT
T ss_pred cceEcccceeeecccccEEecccccce-ecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-ccEehHh
Confidence 344444567888888888888766543 556678888888888886 4555455667888888888888765 6645667
Q ss_pred ccCCCCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCCccccEEEccCCcCc
Q 003847 172 SLTTLQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGGYSLRYLNLSYNRLS 234 (791)
Q Consensus 172 ~~~~l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~~~L~~L~l~~N~l~ 234 (791)
+|.++.+|+.+.|..+ ++..-...| .+|+.+++.+|.... .......+|+.|.+..|.+.
T Consensus 329 aF~~C~~L~~i~ip~s-v~~I~~~aF~~C~~L~~i~~~~~~~~~--~~~~~~~~L~~i~i~~~~~~ 391 (394)
T 4gt6_A 329 AFAGCEQLERIAIPSS-VTKIPESAFSNCTALNNIEYSGSRSQW--NAISTDSGLQNLPVAPGSID 391 (394)
T ss_dssp TTTTCTTCCEEEECTT-CCBCCGGGGTTCTTCCEEEESSCHHHH--HTCBCCCCC-----------
T ss_pred HhhCCCCCCEEEECcc-cCEEhHhHhhCCCCCCEEEECCceeeh--hhhhccCCCCEEEeCCCCEE
Confidence 8888888888888654 544333344 678888888876542 12223357888887776653
No 425
>4gt6_A Cell surface protein; leucine rich repeats, putative protein binding, extracellula protein, structural genomics; HET: MSE; 1.80A {Faecalibacterium prausnitzii a2-165}
Probab=97.57 E-value=0.00037 Score=75.88 Aligned_cols=82 Identities=15% Similarity=0.160 Sum_probs=43.9
Q ss_pred ccCCCCCCCEEeCCCCcCC--CCCCCCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCC
Q 003847 172 SLTTLQSLTIVSLKNNYFS--DGLPSKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVN 248 (791)
Q Consensus 172 ~~~~l~~L~~L~L~~N~l~--~~~p~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l 248 (791)
.|.++..|+.+.+.++..+ ........+|+.+.+. +.++..-...|.+ .+|+.++|..| ++ .|.+..|..+.+|
T Consensus 260 aF~~c~~L~~i~lp~~~~~I~~~aF~~c~~L~~i~l~-~~i~~I~~~aF~~c~~L~~i~lp~~-v~-~I~~~aF~~C~~L 336 (394)
T 4gt6_A 260 AFDSCAYLASVKMPDSVVSIGTGAFMNCPALQDIEFS-SRITELPESVFAGCISLKSIDIPEG-IT-QILDDAFAGCEQL 336 (394)
T ss_dssp TTTTCSSCCEEECCTTCCEECTTTTTTCTTCCEEECC-TTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTC
T ss_pred eeeecccccEEecccccceecCcccccccccccccCC-CcccccCceeecCCCCcCEEEeCCc-cc-EehHhHhhCCCCC
Confidence 4667778888887655322 1111222556666664 3344233334444 46666666544 44 5555555556666
Q ss_pred cEEEcccC
Q 003847 249 ATIDLSFN 256 (791)
Q Consensus 249 ~~l~l~~N 256 (791)
+.+.|..+
T Consensus 337 ~~i~ip~s 344 (394)
T 4gt6_A 337 ERIAIPSS 344 (394)
T ss_dssp CEEEECTT
T ss_pred CEEEECcc
Confidence 66666543
No 426
>3jr1_A Putative fructosamine-3-kinase; YP_719053.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 2.32A {Haemophilus somnus 129PT}
Probab=97.50 E-value=0.0006 Score=71.35 Aligned_cols=136 Identities=13% Similarity=0.102 Sum_probs=91.7
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC---CCCccceeeEEEccCceEEEEeccCCCC
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV---HPNLVRIRGFYWGVDEKLIIYDFVPNGS 557 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~~~~~~~~~lv~e~~~~gs 557 (791)
..|+.|....+|+... ++..++||+.... ....+..|++.|+.|. ...+++++++....+..++||||+++..
T Consensus 42 ~~l~gG~~n~~y~v~~-~~~~~vlK~~~~~---~~~~~~~E~~~L~~L~~~~~v~VP~vl~~~~~~g~~~lvme~l~G~~ 117 (312)
T 3jr1_A 42 EKLYSGEMNEIWLIND-EVQTVFVKINERS---YRSMFRAEADQLALLAKTNSINVPLVYGIGNSQGHSFLLLEALNKSK 117 (312)
T ss_dssp EEECCSSSSEEEEEES-SSCEEEEEEEEGG---GHHHHHHHHHHHHHHHHTTSSBCCCEEEEEECSSEEEEEEECCCCCC
T ss_pred EEeCCccceeeeEEEE-CCCeEEEEeCCcc---cHHHHHHHHHHHHHHHhhCCCCcceEEEEeecCCceEEEEEeccCCC
Confidence 4578899999999986 4678889987543 2467889999998883 3568899998888888999999999876
Q ss_pred hhH-----------HHHhhcCCC-----------------CCCCCHHHHH---HHH----------------HHHHHHH-
Q 003847 558 LAN-----------ARYRKMGSS-----------------PCHLPWEARL---KIA----------------KGVARGL- 589 (791)
Q Consensus 558 L~~-----------~l~~~~~~~-----------------~~~l~~~~~~---~i~----------------~qi~~gL- 589 (791)
+.. .++...... ...-+|.+.. ++. .+++..+
T Consensus 118 ~~~~~~~~lG~~LA~LH~~~~~~~fG~~~~~~~G~~~q~n~w~~~W~~f~~~~Rl~~~l~~a~~~g~~~~~~~~l~~~l~ 197 (312)
T 3jr1_A 118 NKQSSFTIFAEKIAQLHQIQGPDKYGLDFDTWLGPIYQPNDWQTSWAKFFSENRIGWQLQICKEKGLIFGNIDLIVQIVA 197 (312)
T ss_dssp CCTTHHHHHHHHHHHHHHCCCCSSBBCSSCEEETTEEECCCCBSCHHHHHHHHTHHHHHHHHHHHTCCCSCHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCCCCCCcCCHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 521 233322100 0012454321 111 1122222
Q ss_pred HHHh----cCCCeecCCCCCCeEecCCCCeEEeccC
Q 003847 590 AFLH----EKKHVHGNLKPRNVLLGNDMEPKIGDFG 621 (791)
Q Consensus 590 ~yLH----~~~ivHrDlkp~NILl~~~~~~kL~DFG 621 (791)
+.|. ...+||+|+.+.|++++.++ +.|+||.
T Consensus 198 ~~L~~~~~~~~l~HgD~~~~N~l~~~~~-~~~iD~~ 232 (312)
T 3jr1_A 198 DTLSKHNPKPSILHGNLWIENCIQVDDK-IFVCNPA 232 (312)
T ss_dssp HHHTTCCCCCEEECSSCSGGGEEEETTE-EEECSCC
T ss_pred HHhccCCCCceeEeCCCCcCcEeecCCC-eEEEcCc
Confidence 2442 25699999999999999887 8999984
No 427
>3dxq_A Choline/ethanolamine kinase family protein; NP_106042.1, STR genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 2.55A {Mesorhizobium loti}
Probab=97.43 E-value=0.00031 Score=73.33 Aligned_cols=71 Identities=6% Similarity=0.162 Sum_probs=44.9
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCc-cceeeEEEccCceEEEEecc-CCCCh
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNL-VRIRGFYWGVDEKLIIYDFV-PNGSL 558 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lv~e~~-~~gsL 558 (791)
..|+.|....+|++ +.+++|+....... .....+|+.+++.+....+ .+++++ +.+.-++|+||+ ++.++
T Consensus 24 ~~l~gG~tN~~~~~-----~~~vlR~~~~~~~~-~~~r~~E~~~l~~l~~~g~~P~~~~~--~~~~~~~v~e~i~~g~~l 95 (301)
T 3dxq_A 24 LERLGGLTNLVFRA-----GDLCLRIPGKGTEE-YINRANEAVAAREAAKAGVSPEVLHV--DPATGVMVTRYIAGAQTM 95 (301)
T ss_dssp EEEESCSSEEEEEE-----TTEEEEEECC-----CCCHHHHHHHHHHHHHTTSSCCEEEE--CTTTCCEEEECCTTCEEC
T ss_pred eEcCCcccccccee-----eeEEEECCCCCccc-eeCHHHHHHHHHHHHHcCCCCceEEE--ECCCCEEEEeecCCCccC
Confidence 46778889999998 56888988654221 1233567877777743333 455543 444567899999 66555
Q ss_pred h
Q 003847 559 A 559 (791)
Q Consensus 559 ~ 559 (791)
.
T Consensus 96 ~ 96 (301)
T 3dxq_A 96 S 96 (301)
T ss_dssp C
T ss_pred C
Confidence 3
No 428
>1zyl_A Hypothetical protein YIHE; putative protein kinase, structural genomics, PSI, protein structure initiative; 2.80A {Escherichia coli} SCOP: d.144.1.6
Probab=97.35 E-value=0.0015 Score=69.02 Aligned_cols=140 Identities=14% Similarity=0.100 Sum_probs=81.9
Q ss_pred eccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCC--CccceeeE-----EEccCceEEEEeccC
Q 003847 482 ILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHP--NLVRIRGF-----YWGVDEKLIIYDFVP 554 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~--nIv~l~~~-----~~~~~~~~lv~e~~~ 554 (791)
.++ |....||++...+|+.+++|+...... ....+..|..+++.+... .+++++.. ....+..++||||++
T Consensus 33 ~l~-g~~n~~y~v~~~~g~~~vlK~~~~~~~-~~~~~~~E~~~~~~L~~~g~~vp~~~~~~g~~~~~~~g~~~~l~~~i~ 110 (328)
T 1zyl_A 33 PLN-SYENRVYQFQDEDRRRFVVKFYRPERW-TADQILEEHQFALQLVNDEVPVAAPVAFNGQTLLNHQGFYFAVFPSVG 110 (328)
T ss_dssp EEC-CSSSEEEEECCTTCCCEEEEEECTTTS-CHHHHHHHHHHHHHHHHTTCSBCCCCCBTTBSCEEETTEEEEEEECCC
T ss_pred eec-CcccceEEEEcCCCCEEEEEEcCCCCC-CHHHHHHHHHHHHHHHHcCCeecceeecCCcEEEEECCEEEEEEEecC
Confidence 455 778899998877788899999864321 234667788888777422 24444443 222445678999998
Q ss_pred CCChhH--------------HHHhhcCCC----CCCCCHHHH----------------------HHHHHHHHHHHHHH--
Q 003847 555 NGSLAN--------------ARYRKMGSS----PCHLPWEAR----------------------LKIAKGVARGLAFL-- 592 (791)
Q Consensus 555 ~gsL~~--------------~l~~~~~~~----~~~l~~~~~----------------------~~i~~qi~~gL~yL-- 592 (791)
|..+.. .++...... ....++... ...+.+++..++-+
T Consensus 111 G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (328)
T 1zyl_A 111 GRQFEADNIDQMEAVGRYLGRMHQTGRKQLFIHRPTIGLNEYLIEPRKLFEDATLIPSGLKAAFLKATDELIAAVTAHWR 190 (328)
T ss_dssp CEECCSSCHHHHHHHHHHHHHHHHHHTSSCCSSSCBCSHHHHTHHHHHHHHTCSSSCTTTHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHhhccCCCccCCCCCHHHHHhhHHHHHhhcCcCCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 755421 122211110 011222211 11122222222222
Q ss_pred --hcCCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 593 --HEKKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 593 --H~~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
+...++|+|+++.||+++ + .+.|+||+.+..
T Consensus 191 ~~~~~~l~HgD~~~~Nil~~-~-~~~lIDfe~a~~ 223 (328)
T 1zyl_A 191 EDFTVLRLHGDCHAGNILWR-D-GPMFVDLDDARN 223 (328)
T ss_dssp SCSCCEECCSSCSGGGEEES-S-SEEECCCTTCCE
T ss_pred hcCCeeeeeCCCCcccEeEc-C-CCEEEECCCCCc
Confidence 235689999999999998 4 899999988764
No 429
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.29 E-value=4.4e-05 Score=72.17 Aligned_cols=34 Identities=6% Similarity=0.187 Sum_probs=15.8
Q ss_pred cEEEEEcCCCCCccCCCcCCCCCCCCCEEeCcCC
Q 003847 82 RVIGLALPNSQLLGSIPADLGMIEFLQYLDLSNN 115 (791)
Q Consensus 82 ~v~~L~L~~~~l~~~~~~~~~~l~~L~~L~L~~N 115 (791)
+++.|||+++.++..--..+..+++|++|+|+++
T Consensus 62 ~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C 95 (176)
T 3e4g_A 62 KIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKC 95 (176)
T ss_dssp CEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESC
T ss_pred eEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCC
Confidence 4555555555543322233444444455555444
No 430
>3e4g_A ATP synthase subunit S, mitochondrial; leucine-rich repeat, CF0, hydrogen ION transport, inner membrane, ION transport, membrane, mitochondrion; 0.96A {Bos taurus} PDB: 3e3z_A 3dze_A 3e2j_A
Probab=97.28 E-value=7.3e-05 Score=70.70 Aligned_cols=87 Identities=11% Similarity=0.112 Sum_probs=67.6
Q ss_pred CCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCc-CCCCCccccCCC----CCCCEEeCcCCc-CCCCCccccCCCCC
Q 003847 105 EFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNL-ISGHLPETMGSL----HNLQLLNLSDNA-LAGKLPVSLTTLQS 178 (791)
Q Consensus 105 ~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~-l~~~~p~~~~~l----~~L~~L~ls~N~-l~~~~p~~~~~l~~ 178 (791)
-.|+.|||+++.|+..--..+.++++|+.|+|+++. |+..--..+..+ ++|++|+|+++. ++..--..+..+++
T Consensus 61 ~~L~~LDLs~~~Itd~GL~~L~~~~~L~~L~L~~C~~ItD~gL~~L~~~~~~~~~L~~L~Ls~C~~ITD~Gl~~L~~~~~ 140 (176)
T 3e4g_A 61 YKIQAIDATDSCIMSIGFDHMEGLQYVEKIRLCKCHYIEDGCLERLSQLENLQKSMLEMEIISCGNVTDKGIIALHHFRN 140 (176)
T ss_dssp CCEEEEEEESCCCCGGGGGGGTTCSCCCEEEEESCTTCCHHHHHHHHTCHHHHHHCCEEEEESCTTCCHHHHHHGGGCTT
T ss_pred ceEeEEeCcCCCccHHHHHHhcCCCCCCEEEeCCCCccCHHHHHHHHhcccccCCCCEEEcCCCCcCCHHHHHHHhcCCC
Confidence 479999999999986555567899999999999995 664333345554 479999999974 87544456788999
Q ss_pred CCEEeCCCCc-CCC
Q 003847 179 LTIVSLKNNY-FSD 191 (791)
Q Consensus 179 L~~L~L~~N~-l~~ 191 (791)
|++|+|+++. ++.
T Consensus 141 L~~L~L~~c~~Itd 154 (176)
T 3e4g_A 141 LKYLFLSDLPGVKE 154 (176)
T ss_dssp CCEEEEESCTTCCC
T ss_pred CCEEECCCCCCCCc
Confidence 9999999984 543
No 431
>3csv_A Aminoglycoside phosphotransferase; YP_614837.1, phosphotransferase enzyme family, structural genomics, JOIN for structural genomics, JCSG; HET: MSE; 2.15A {Silicibacter SP}
Probab=97.25 E-value=0.0015 Score=69.22 Aligned_cols=140 Identities=14% Similarity=0.074 Sum_probs=73.9
Q ss_pred eccccCceE-EEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCC--CCccceeeEEEccCceEEEEeccCCCCh
Q 003847 482 ILGASGSSI-MYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVH--PNLVRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 482 ~lG~G~~g~-Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H--~nIv~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
.|+.|+... +|+....+|+.+++|....... ..+..|+.+++.+.. -.+.+++.+.... -+++||++.+..+
T Consensus 25 ~l~gg~s~~~~~r~~~~~~~~~vlk~~~~~~~---~~~~~e~~~l~~L~~~g~~vP~v~~~d~~~--g~ll~e~l~~~~l 99 (333)
T 3csv_A 25 PLAGDASSRRYQRLRSPTGAKAVLMDWSPEEG---GDTQPFVDLAQYLRNLDISAPEIYAEEHAR--GLLLIEDLGDALF 99 (333)
T ss_dssp C--------CCEEEECTTCCEEEEEECCTTTT---CCSHHHHHHHHHHHHTTCBCCCEEEEETTT--TEEEECCCCSCBH
T ss_pred ECCCCCCCceEEEEEcCCCCeEEEEECCCCCC---ccccHHHHHHHHHHhCCCCCCceeeecCCC--CEEEEeeCCCcch
Confidence 344554444 6677654467788887654321 234556677766632 2355676653322 3789999987776
Q ss_pred hHHHHhhcC---------------------CCCCCCCHHHHH-------H-H------------HHHHHHHHHHH-----
Q 003847 559 ANARYRKMG---------------------SSPCHLPWEARL-------K-I------------AKGVARGLAFL----- 592 (791)
Q Consensus 559 ~~~l~~~~~---------------------~~~~~l~~~~~~-------~-i------------~~qi~~gL~yL----- 592 (791)
.+++..... .....++..... . + ...+...++.+
T Consensus 100 ~~~l~~~~~~~~~~~~~~~~~La~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~~~~l~~~~~ 179 (333)
T 3csv_A 100 TEVINNDPAQEMPLYRAAVDLLIHLHDAQTPELARLDPETLSEMTRLAFSEYRYAILGDAAEDNRKRFEHRFAQILSAQL 179 (333)
T ss_dssp HHHHHHCGGGHHHHHHHHHHHHHHHHTSCCCCCCBCCHHHHHHTTTHHHHTHHHHHHSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred HHHhcCCCccHHHHHHHHHHHHHHHhcCCCccCCccCHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHhcc
Confidence 554432110 000012211100 0 0 01111222333
Q ss_pred -hcCCCeecCCCCCCeEecCC----CCeEEeccCccccc
Q 003847 593 -HEKKHVHGNLKPRNVLLGND----MEPKIGDFGLERLV 626 (791)
Q Consensus 593 -H~~~ivHrDlkp~NILl~~~----~~~kL~DFGla~~~ 626 (791)
+...++|||+.+.|||++.+ +.+.|+||+.+..-
T Consensus 180 ~~~~~lvHgD~~~~Nil~~~~~~~~~~~~lIDf~~a~~G 218 (333)
T 3csv_A 180 EGDMVFVHRDFHAQNLLWLPEREGLARVGVIDFQDAKLG 218 (333)
T ss_dssp CSCCEEECSCCSGGGEEECTTSCGGGGEEECCCTTCEEE
T ss_pred cCCCeeEeCCcCcccEEeccCcCCCCCeEEEeCCCcCcC
Confidence 23579999999999999874 67899999988753
No 432
>2ppq_A HSK, HK, homoserine kinase; structural genomics, MCSG, PSI-2, protein structure initiative; 2.00A {Agrobacterium tumefaciens str} SCOP: d.144.1.6
Probab=97.24 E-value=0.0015 Score=68.68 Aligned_cols=142 Identities=11% Similarity=0.037 Sum_probs=79.6
Q ss_pred eeccccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCC--ccceeeE------EEccCceEEEEec
Q 003847 481 YILGASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLVHPN--LVRIRGF------YWGVDEKLIIYDF 552 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n--Iv~l~~~------~~~~~~~~lv~e~ 552 (791)
..|+.|....+|++...+| .+++|+..... ..+.+..|+.+++.+.... +.+++.. ....+..+++|+|
T Consensus 28 ~~i~~G~~n~~~~v~~~~g-~~vlk~~~~~~--~~~~l~~e~~~l~~L~~~g~~vP~~~~~~~g~~~~~~~g~~~~l~~~ 104 (322)
T 2ppq_A 28 KGIAEGVENSNFLLHTTKD-PLILTLYEKRV--EKNDLPFFLGLMQHLAAKGLSCPLPLPRKDGELLGELSGRPAALISF 104 (322)
T ss_dssp EEECC---EEEEEEEESSC-CEEEEEECC-----CCHHHHHHHHHHHHHHTTCCCCCBCCBTTCCSCEEETTEEEEEEEC
T ss_pred eccCCCcccceEEEEeCCc-cEEEEEeCCCC--CHHHHHHHHHHHHHHHHCCCCCCcccCCCCCCEEEEECCEEEEEEEe
Confidence 3567788889999987665 68899887631 1234566777777663212 3333321 1223567899999
Q ss_pred cCCCChhH--------------HHHhhcCCCCCC----C---CHHHHHH------------HHHHHHHHHHHHhc-----
Q 003847 553 VPNGSLAN--------------ARYRKMGSSPCH----L---PWEARLK------------IAKGVARGLAFLHE----- 594 (791)
Q Consensus 553 ~~~gsL~~--------------~l~~~~~~~~~~----l---~~~~~~~------------i~~qi~~gL~yLH~----- 594 (791)
++|..+.. .++.....-..+ . .|..... +...+...++++++
T Consensus 105 l~G~~~~~~~~~~~~~~g~~La~lH~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~l~~~~~~l~~~~~~~ 184 (322)
T 2ppq_A 105 LEGMWLRKPEAKHCREVGKALAAMHLASEGFEIKRPNALSVDGWKVLWDKSEERADEVEKGLREEIRPEIDYLAAHWPKD 184 (322)
T ss_dssp CCCBCCSSCCHHHHHHHHHHHHHHHHHTTTCCCCCBCTTSHHHHHHHHHHHGGGGGGTSTTHHHHHHHHHHHHHHHCCCS
T ss_pred CCCcCCCCCCHHHHHHHHHHHHHHHHHhccCCCcccCccChHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhCccc
Confidence 98865421 122221110000 1 1221100 01123444555552
Q ss_pred --CCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 595 --KKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 595 --~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
.+++|+|+.+.|||++.+..+.|+||+.+..
T Consensus 185 ~~~~liHgDl~~~Nil~~~~~~~~lIDf~~a~~ 217 (322)
T 2ppq_A 185 LPAGVIHADLFQDNVFFLGDELSGLIDFYFACN 217 (322)
T ss_dssp SCEEEECSCCCGGGEEEETTEEEEECCCTTCEE
T ss_pred CCcccCCCCCCccCEEEeCCceEEEecchhccC
Confidence 4689999999999998876568999998764
No 433
>3feg_A Choline/ethanolamine kinase; non-protein kinase, choline kinase, structural genomics CONS SGC, hemicholinium-3, phosphorylation; HET: HC7 ADP AMP; 1.30A {Homo sapiens} PDB: 3lq3_A* 2ig7_A*
Probab=97.22 E-value=0.0011 Score=71.37 Aligned_cols=140 Identities=13% Similarity=0.150 Sum_probs=83.9
Q ss_pred eeccccCceEEEEEEeC--------CCcEEEEEEcCCCchhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEe
Q 003847 481 YILGASGSSIMYKAVLE--------DGTALAVRRIGENSVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~--------~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e 551 (791)
..+..|-...+|++... +++.+++|+..... .....+.+|.++++.+. +.-..++++++.+ .+|||
T Consensus 56 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlR~~g~~~-~~~~~~~rE~~vl~~L~~~gv~P~ll~~~~~----g~v~e 130 (379)
T 3feg_A 56 YPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAIL-QGVDSLVLESVMFAILAERSLGPQLYGVFPE----GRLEQ 130 (379)
T ss_dssp EEC-----CCEEEEECCTTSCCCSSCCSEEEEEECC----CCHHHHHHHHHHHHHHHHTTSSCCEEEEETT----EEEEE
T ss_pred EEcCCcccccEEEEEeCCCccccCCCCCeEEEEECCCcc-chHHHHHHHHHHHHHHHhcCCCCeEEEEcCC----ccEEE
Confidence 35667778889999864 25789999975432 22456678999998884 3334567766543 28999
Q ss_pred ccCCCChhH--------------H---HHhhcCCCCCCC--CHHHHHHHHHHHHH-------------------HHHHHh
Q 003847 552 FVPNGSLAN--------------A---RYRKMGSSPCHL--PWEARLKIAKGVAR-------------------GLAFLH 593 (791)
Q Consensus 552 ~~~~gsL~~--------------~---l~~~~~~~~~~l--~~~~~~~i~~qi~~-------------------gL~yLH 593 (791)
|++|.+|.. . ++.......... -+.++.++..++.. .++.|.
T Consensus 131 ~i~G~~l~~~~l~~p~~~~~ia~~La~LH~~~~~~~~~~~~l~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~ 210 (379)
T 3feg_A 131 YIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLR 210 (379)
T ss_dssp CCSEEECCGGGGGCHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSCCSCCHHHHTTHHHHHHHHH
T ss_pred EecCccCChhHhCCHHHHHHHHHHHHHHhCCCCCCCCCcccHHHHHHHHHHHHHhccCcccchhhhhhhHHHHHHHHHHH
Confidence 999866531 1 111110000112 24556666554422 233333
Q ss_pred c--------CCCeecCCCCCCeEecCC----CCeEEeccCcccc
Q 003847 594 E--------KKHVHGNLKPRNVLLGND----MEPKIGDFGLERL 625 (791)
Q Consensus 594 ~--------~~ivHrDlkp~NILl~~~----~~~kL~DFGla~~ 625 (791)
+ ..++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 211 ~~L~~~~~~~~~~H~D~~~~Nil~~~~~~~~~~~~~IDwE~a~~ 254 (379)
T 3feg_A 211 KLLESTPSPVVFCHNDIQEGNILLLSEPENADSLMLVDFEYSSY 254 (379)
T ss_dssp HHHHTSCCCEEEECSCCCGGGEEEESCC---CCEEECCCTTCEE
T ss_pred HHHhhcCCCcEEEcCCCCCCeEEEcCCCCccCcEEEEecccCCc
Confidence 2 358999999999999876 7899999998764
No 434
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.22 E-value=0.0011 Score=71.70 Aligned_cols=142 Identities=11% Similarity=0.094 Sum_probs=89.7
Q ss_pred CCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCC
Q 003847 96 SIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTT 175 (791)
Q Consensus 96 ~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~ 175 (791)
.....+.....|+.+.+..+ +.......|.++.+|+.+.+..+ ++..-...|.++.+|+.+.+..+ +.......|.+
T Consensus 208 i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l~~i~l~~~-i~~i~~~aF~~ 284 (379)
T 4h09_A 208 VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTALKTLNFYAK-VKTVPYLLCSG 284 (379)
T ss_dssp ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTCCEEEECCC-CSEECTTTTTT
T ss_pred Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehhcccccccc-ceecccccccc
Confidence 34455666777777777655 33344556777777777777665 54455566777777777777644 44345566777
Q ss_pred CCCCCEEeCCCCcCCCCCCCCC---cccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhh
Q 003847 176 LQSLTIVSLKNNYFSDGLPSKF---NSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGE 243 (791)
Q Consensus 176 l~~L~~L~L~~N~l~~~~p~~l---~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~ 243 (791)
+.+|+.+.+.+|.++..-...| .+|+.++|..| ++..-..+|.+ .+|+.+.+..| ++ .|....|.
T Consensus 285 c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~~I~~~aF~~C~~L~~i~ip~~-v~-~I~~~aF~ 353 (379)
T 4h09_A 285 CSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LKTIQVYAFKNCKALSTISYPKS-IT-LIESGAFE 353 (379)
T ss_dssp CTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CCEECTTTTTTCTTCCCCCCCTT-CC-EECTTTTT
T ss_pred ccccccccccccccceehhhhhcCCCCCCEEEcCcc-ccEEHHHHhhCCCCCCEEEECCc-cC-EEchhHhh
Confidence 7778877777776665444444 56777777654 55333445555 46777777654 55 55555554
No 435
>1nw1_A Choline kinase (49.2 KD); phospholipid synthesis, protein kinase fold, transferase; 2.02A {Caenorhabditis elegans} SCOP: d.144.1.8
Probab=97.17 E-value=0.00095 Score=73.39 Aligned_cols=72 Identities=13% Similarity=0.231 Sum_probs=49.3
Q ss_pred eeccccCceEEEEEEeCC--------CcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCc-cceeeEEEccCceEEEEe
Q 003847 481 YILGASGSSIMYKAVLED--------GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNL-VRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lv~e 551 (791)
..|+.|....+|++...+ ++.+++|+...... ...+..|..+++.+...++ .++++.+.+ .+|+|
T Consensus 79 ~~l~gG~tN~~y~v~~~~~~~~~~~~~~~~vlRi~~~~~~--~~~li~E~~~l~~L~~~g~~P~l~~~~~~----g~v~e 152 (429)
T 1nw1_A 79 SRIKGGMSNMLFLCRLSEVYPPIRNEPNKVLLRVYFNPET--ESHLVAESVIFTLLSERHLGPKLYGIFSG----GRLEE 152 (429)
T ss_dssp EEECCCTTEEEEEEEECTTSCCSSSCCSEEEEEEECSCCC--HHHHHHHHHHHHHHHHTTSSSCEEEEETT----EEEEC
T ss_pred EEeCCCcccceEEEEeCCCccccCCCCceEEEEEeCCCCc--HHHHHHHHHHHHHHHhCCCCCcEEEEeCC----CEEEE
Confidence 457788889999998653 57899999854211 1345578888888843333 577765532 38999
Q ss_pred ccCCCCh
Q 003847 552 FVPNGSL 558 (791)
Q Consensus 552 ~~~~gsL 558 (791)
|++|.+|
T Consensus 153 ~l~G~~l 159 (429)
T 1nw1_A 153 YIPSRPL 159 (429)
T ss_dssp CCCEEEC
T ss_pred EeCCccc
Confidence 9986444
No 436
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=97.12 E-value=7.6e-05 Score=71.93 Aligned_cols=87 Identities=23% Similarity=0.222 Sum_probs=44.2
Q ss_pred CCCCCCCCEEeCcCC-CCCCC----CcccccCCCCccEEEccCCcCCC----CCccccCCCCCCCEEeCcCCcCCCC---
Q 003847 101 LGMIEFLQYLDLSNN-SLNGS----LSFSLFNASQLRNLDLSNNLISG----HLPETMGSLHNLQLLNLSDNALAGK--- 168 (791)
Q Consensus 101 ~~~l~~L~~L~L~~N-~l~~~----~p~~~~~l~~L~~L~L~~N~l~~----~~p~~~~~l~~L~~L~ls~N~l~~~--- 168 (791)
+.+-+.|++|+|++| +|... +-..+..-+.|+.|+|++|+|.. .+.+.+..-+.|+.|+|++|.|...
T Consensus 37 l~~n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ 116 (197)
T 1pgv_A 37 REDDTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLA 116 (197)
T ss_dssp HTTCSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHH
T ss_pred HhcCCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHH
Confidence 334456667777664 55421 22334444566666666666652 2233333445566666666666521
Q ss_pred -CccccCCCCCCCEEeCCCC
Q 003847 169 -LPVSLTTLQSLTIVSLKNN 187 (791)
Q Consensus 169 -~p~~~~~l~~L~~L~L~~N 187 (791)
+-..+..-+.|++|+|++|
T Consensus 117 ala~aL~~N~tL~~L~L~n~ 136 (197)
T 1pgv_A 117 RLLRSTLVTQSIVEFKADNQ 136 (197)
T ss_dssp HHHHHTTTTCCCSEEECCCC
T ss_pred HHHHHHhhCCceeEEECCCC
Confidence 1223334445555555543
No 437
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=97.11 E-value=0.00058 Score=61.44 Aligned_cols=57 Identities=25% Similarity=0.328 Sum_probs=36.9
Q ss_pred eecccccccc-ccCCCCcCCccccEEEccCCcCcccCchhHhhcCCCCcEEEcccCcCcc
Q 003847 202 VLDLSSNLIN-GSLPPDIGGYSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSFNNLTG 260 (791)
Q Consensus 202 ~L~ls~N~l~-~~~p~~~~~~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~N~l~~ 260 (791)
.++.+++.|+ ..+|..+. .+|++|+|++|+|+ .||...+..+++|+.|+|++|++..
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp-~~l~~L~Ls~N~l~-~l~~~~f~~l~~L~~L~L~~NP~~C 69 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP-VDTTELVLTGNNLT-ALPPGLLDALPALRTAHLGANPWRC 69 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC-TTCSEEECTTSCCS-SCCTTTGGGCTTCCEEECCSSCCBC
T ss_pred EEEeCCCCCccccCCCCCC-cCCCEEECCCCcCC-ccChhhhhhccccCEEEecCCCeec
Confidence 3445555553 23443321 35777777777777 7777777778888888887777754
No 438
>4h09_A Hypothetical leucine rich repeat protein; two LRR_5 domains, PF13306 family, structural genomics, JOIN for structural genomics, JCSG; 2.50A {Eubacterium ventriosum}
Probab=97.05 E-value=0.0019 Score=69.73 Aligned_cols=151 Identities=9% Similarity=0.069 Sum_probs=112.9
Q ss_pred CCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCC
Q 003847 100 DLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSL 179 (791)
Q Consensus 100 ~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L 179 (791)
.+.....+..+.+..+.-. .....+....+|+.+.+..+ +.......|.++.+|+.+.+..+ ++..-...|.++.+|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~-i~~~~f~~~~~l~~i~~~~~-~~~i~~~~f~~~~~L~~i~lp~~-v~~I~~~aF~~~~~l 265 (379)
T 4h09_A 189 SYPAAKTGTEFTIPSTVKT-VTAYGFSYGKNLKKITITSG-VTTLGDGAFYGMKALDEIAIPKN-VTSIGSFLLQNCTAL 265 (379)
T ss_dssp ECCTTCCCSEEECCTTCCE-ECTTTTTTCSSCSEEECCTT-CCEECTTTTTTCSSCCEEEECTT-CCEECTTTTTTCTTC
T ss_pred cccccccccccccccceeE-Eeecccccccccceeeeccc-eeEEccccccCCccceEEEcCCC-ccEeCccccceeehh
Confidence 4555666777766654332 45567778899999999776 44356677889999999999876 665667789999999
Q ss_pred CEEeCCCCcCCCCCC---CCCcccceeccccccccccCCCCcCC-ccccEEEccCCcCcccCchhHhhcCCCCcEEEccc
Q 003847 180 TIVSLKNNYFSDGLP---SKFNSVQVLDLSSNLINGSLPPDIGG-YSLRYLNLSYNRLSGEIPPQFGEKIPVNATIDLSF 255 (791)
Q Consensus 180 ~~L~L~~N~l~~~~p---~~l~~L~~L~ls~N~l~~~~p~~~~~-~~L~~L~l~~N~l~g~ip~~~~~~l~~l~~l~l~~ 255 (791)
+.+.+..+ ++.... ....+|+.+++.+|.++..-...|.+ .+|+.++|..| ++ .|....|..+.+|+.+.+..
T Consensus 266 ~~i~l~~~-i~~i~~~aF~~c~~L~~i~l~~~~i~~I~~~aF~~c~~L~~i~lp~~-l~-~I~~~aF~~C~~L~~i~ip~ 342 (379)
T 4h09_A 266 KTLNFYAK-VKTVPYLLCSGCSNLTKVVMDNSAIETLEPRVFMDCVKLSSVTLPTA-LK-TIQVYAFKNCKALSTISYPK 342 (379)
T ss_dssp CEEEECCC-CSEECTTTTTTCTTCCEEEECCTTCCEECTTTTTTCTTCCEEECCTT-CC-EECTTTTTTCTTCCCCCCCT
T ss_pred cccccccc-ceeccccccccccccccccccccccceehhhhhcCCCCCCEEEcCcc-cc-EEHHHHhhCCCCCCEEEECC
Confidence 99999755 443223 33478999999999998555666766 68999999765 76 78888777789999888765
Q ss_pred C
Q 003847 256 N 256 (791)
Q Consensus 256 N 256 (791)
|
T Consensus 343 ~ 343 (379)
T 4h09_A 343 S 343 (379)
T ss_dssp T
T ss_pred c
Confidence 4
No 439
>2yle_A Protein spire homolog 1; actin-binding protein, actin polymerization; 1.80A {Homo sapiens} PDB: 2ylf_A 3r7g_A 3rbw_A
Probab=97.05 E-value=0.0036 Score=60.61 Aligned_cols=99 Identities=13% Similarity=0.005 Sum_probs=65.6
Q ss_pred CChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhc-CCCeecCCCCCCeEecCCCCeEEeccCcccccCCCCCCCc
Q 003847 556 GSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHE-KKHVHGNLKPRNVLLGNDMEPKIGDFGLERLVTGDTSSSK 634 (791)
Q Consensus 556 gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~-~~ivHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~ 634 (791)
-+|.+++..... ++++++++.++.|.+.+|.-+-. +.-..+=+.|..|++..+|.|...+ ..+..
T Consensus 33 vSL~eIL~~~~~----PlsEEqaWALc~Qc~~~L~~~~~~~~~~~~i~~~~~i~l~~dG~V~f~~-~~s~~--------- 98 (229)
T 2yle_A 33 LSLEEILRLYNQ----PINEEQAWAVCYQCCGSLRAAARRRQPRHRVRSAAQIRVWRDGAVTLAP-AADDA--------- 98 (229)
T ss_dssp EEHHHHHHHHTS----CCCHHHHHHHHHHHHHHHHHHHHTTCCCCCCCSGGGEEEETTSCEEECC-C-------------
T ss_pred ccHHHHHHHcCC----CcCHHHHHHHHHHHHHHHHhhhhcccCCceecCCcceEEecCCceeccc-ccccc---------
Confidence 479998887754 59999999999999999887721 1111233456889999999988764 11110
Q ss_pred CCCCccccCCcccccccccccCCCCCCCCCCCCCCCCCCCCCcccCcccccCCCCCCchhhHHHHHHHHHHHhC
Q 003847 635 AGGSARNFGSKRSTASRDSFQDLGPGPSPSPSPSPSSLGGISPYHAPESLRSIKPNPKWDVYSFGVILLELLTG 708 (791)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~APE~~~~~~~~~~sDvwSlGvil~elltG 708 (791)
....+.|||... ...+.+.=|||||+++|.-+--
T Consensus 99 ---------------------------------------~~~~~~~pe~~~-~~~te~~~IysLG~tLY~ALDy 132 (229)
T 2yle_A 99 ---------------------------------------GEPPPVAGKLGY-SQCMETEVIESLGIIIYKALDY 132 (229)
T ss_dssp -----------------------------------------------CCSS-SSSCHHHHHHHHHHHHHHHHTT
T ss_pred ---------------------------------------cccCCCChhhcc-ccchHHHHHHHHHHHHHHHhhc
Confidence 112267888764 3456888999999999998753
No 440
>3c5i_A Choline kinase; choline, kinase, malaria, transferase, structural genomics, structural genomics consortium; 2.20A {Plasmodium knowlesi} PDB: 3fi8_A*
Probab=96.99 E-value=0.001 Score=71.68 Aligned_cols=73 Identities=10% Similarity=0.112 Sum_probs=45.1
Q ss_pred eeccccCceEEEEEEeCC---------CcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCC-ccceeeEEEccCceEEEE
Q 003847 481 YILGASGSSIMYKAVLED---------GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPN-LVRIRGFYWGVDEKLIIY 550 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~---------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~n-Iv~l~~~~~~~~~~~lv~ 550 (791)
..++.|....+|++...+ ++.+++|+....... ......|.++++.+...+ +.++++.. . -++||
T Consensus 39 ~~l~~G~~N~~y~v~~~~~~~~~~~~~~~~~vlRi~~~~~~~-~~~~~~E~~~l~~L~~~g~~P~~~~~~--~--~~~v~ 113 (369)
T 3c5i_A 39 KQILSGLTNQLFEVGLKEETANNYNSIRTRVLFRIYGKHVDE-LYNTISEFEVYKTMSKYKIAPQLLNTF--N--GGRIE 113 (369)
T ss_dssp EEC----CCEEEEEEECHHHHTTCTTSCCEEEEEECCTTGGG-TSCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEE
T ss_pred EEeCCcccceEEEEEeCCCCcccccCCCceEEEEecCCCccc-eecHHHHHHHHHHHHhcCCCCceEEec--C--CcEEE
Confidence 356778888999998654 268899987654221 123467888888774333 44666544 2 36899
Q ss_pred eccCCCCh
Q 003847 551 DFVPNGSL 558 (791)
Q Consensus 551 e~~~~gsL 558 (791)
||++|..+
T Consensus 114 e~i~G~~l 121 (369)
T 3c5i_A 114 EWLYGDPL 121 (369)
T ss_dssp ECCCSEEC
T ss_pred EEecCCcC
Confidence 99987544
No 441
>1pgv_A TMD-1, tropomodulin TMD-1; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics secsg; 1.80A {Caenorhabditis elegans} SCOP: c.10.1.1
Probab=96.80 E-value=0.00021 Score=68.82 Aligned_cols=110 Identities=14% Similarity=0.189 Sum_probs=78.1
Q ss_pred CCcEEEEEcCCC-CCcc----CCCcCCCCCCCCCEEeCcCCCCCCC----CcccccCCCCccEEEccCCcCCCC----Cc
Q 003847 80 DSRVIGLALPNS-QLLG----SIPADLGMIEFLQYLDLSNNSLNGS----LSFSLFNASQLRNLDLSNNLISGH----LP 146 (791)
Q Consensus 80 ~~~v~~L~L~~~-~l~~----~~~~~~~~l~~L~~L~L~~N~l~~~----~p~~~~~l~~L~~L~L~~N~l~~~----~p 146 (791)
...++.|+|++| +|.. .+...+..-+.|+.|+|++|+|... +...+..-+.|++|+|++|+|... +-
T Consensus 40 n~~L~~L~L~~nn~igd~ga~~la~aL~~N~~L~~L~L~~n~igd~ga~alA~aL~~N~tL~~L~L~~N~Ig~~Ga~ala 119 (197)
T 1pgv_A 40 DTDLKEVNINNMKRVSKERIRSLIEAACNSKHIEKFSLANTAISDSEARGLIELIETSPSLRVLNVESNFLTPELLARLL 119 (197)
T ss_dssp CSSCCEEECTTCCSSCHHHHHHHHHHHTTCSCCCEEECTTSCCBHHHHTTHHHHHHHCSSCCEEECCSSBCCHHHHHHHH
T ss_pred CCCccEEECCCCCCCCHHHHHHHHHHHhhCCCcCEEEccCCCCChHHHHHHHHHHhcCCccCeEecCCCcCCHHHHHHHH
Confidence 467899999986 7642 2445677778999999999999833 344444568899999999999832 34
Q ss_pred cccCCCCCCCEEeCcCCcC---CCC----CccccCCCCCCCEEeCCCCcC
Q 003847 147 ETMGSLHNLQLLNLSDNAL---AGK----LPVSLTTLQSLTIVSLKNNYF 189 (791)
Q Consensus 147 ~~~~~l~~L~~L~ls~N~l---~~~----~p~~~~~l~~L~~L~L~~N~l 189 (791)
+.+..-+.|+.|+|++|.. ... +-..+..-+.|+.|+|+.|.+
T Consensus 120 ~aL~~N~tL~~L~L~n~~~~~ig~~g~~~ia~aL~~N~tL~~L~l~~~~~ 169 (197)
T 1pgv_A 120 RSTLVTQSIVEFKADNQRQSVLGNQVEMDMMMAIEENESLLRVGISFASM 169 (197)
T ss_dssp HHTTTTCCCSEEECCCCSSCCCCHHHHHHHHHHHHHCSSCCEEECCCCCH
T ss_pred HHHhhCCceeEEECCCCcCcCcCHHHHHHHHHHHHhCCCcCeEeccCCCc
Confidence 4566667899999997643 311 223444556778888876654
No 442
>3i1a_A Spectinomycin phosphotransferase; protein kinase, aminoglycoside phosphotransferase, antibiotic resistance; HET: MES PG4; 1.70A {Legionella pneumophila} PDB: 3i0q_A* 3i0o_A* 3q2m_A*
Probab=96.79 E-value=0.0026 Score=67.53 Aligned_cols=68 Identities=18% Similarity=0.106 Sum_probs=43.8
Q ss_pred cccCceEEEEEEeCCCcEEEEEEcCCCchhhHHHHHHHHHHHhccC---CCCccceeeE------EEccCceEEEEeccC
Q 003847 484 GASGSSIMYKAVLEDGTALAVRRIGENSVDRFRDFETQVRVIAKLV---HPNLVRIRGF------YWGVDEKLIIYDFVP 554 (791)
Q Consensus 484 G~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~---H~nIv~l~~~------~~~~~~~~lv~e~~~ 554 (791)
|.|....||++...+| .+++|+...... ..|+.+++.|. -+.+++.+.. ....+..++||+|++
T Consensus 32 G~g~~N~vy~v~~~~g-~~vLK~~~~~~~------~~E~~~l~~L~~~g~~~vp~pi~~~~G~~~~~~~g~~~~l~~~i~ 104 (339)
T 3i1a_A 32 GADTNAFAYQADSESK-SYFIKLKYGYHD------EINLSIIRLLHDSGIKEIIFPIHTLEAKLFQQLKHFKIIAYPFIH 104 (339)
T ss_dssp TSCSSCEEEEEECSSC-EEEEEEEECSSC------CHHHHHHHHHHHTTCCSSCCCCCCTTSCSSEECSSEEEEEEECCC
T ss_pred cCccccceEEEEeCCC-CEEEEEecCccc------hHHHHHHHHHHhcCCcccccceecCCCCEEEEECCEEEEEEeccC
Confidence 4444689999997777 899998765432 34555555552 2224454432 233567789999999
Q ss_pred CCCh
Q 003847 555 NGSL 558 (791)
Q Consensus 555 ~gsL 558 (791)
|..+
T Consensus 105 G~~~ 108 (339)
T 3i1a_A 105 APNG 108 (339)
T ss_dssp CCBT
T ss_pred CCcC
Confidence 8766
No 443
>3rfe_A Platelet glycoprotein IB beta chain; platelet surface receptor, GPIX, cell adhesion; HET: NAG; 1.25A {Homo sapiens} PDB: 3rez_A*
Probab=96.77 E-value=0.0021 Score=57.73 Aligned_cols=56 Identities=23% Similarity=0.266 Sum_probs=30.5
Q ss_pred EEEccCCcCC-CCCccccCCCCCCCEEeCcCCcCCCCCccccCCCCCCCEEeCCCCcCC
Q 003847 133 NLDLSNNLIS-GHLPETMGSLHNLQLLNLSDNALAGKLPVSLTTLQSLTIVSLKNNYFS 190 (791)
Q Consensus 133 ~L~L~~N~l~-~~~p~~~~~l~~L~~L~ls~N~l~~~~p~~~~~l~~L~~L~L~~N~l~ 190 (791)
.++.+++.|+ ..+|..+. .+|+.|+|++|+|+...+..|..+++|+.|+|++|.+.
T Consensus 12 ~v~Cs~~~L~~~~vP~~lp--~~l~~L~Ls~N~l~~l~~~~f~~l~~L~~L~L~~NP~~ 68 (130)
T 3rfe_A 12 LVDCGRRGLTWASLPTAFP--VDTTELVLTGNNLTALPPGLLDALPALRTAHLGANPWR 68 (130)
T ss_dssp EEECCSSCCCTTTSCSCCC--TTCSEEECTTSCCSSCCTTTGGGCTTCCEEECCSSCCB
T ss_pred EEEeCCCCCccccCCCCCC--cCCCEEECCCCcCCccChhhhhhccccCEEEecCCCee
Confidence 4455555553 23443222 24666666666666554555666666666666666553
No 444
>2qg7_A Ethanolamine kinase PV091845; malaria, SGC, structural genomics consortium, transferase; 2.41A {Plasmodium vivax}
Probab=96.75 E-value=0.0068 Score=66.91 Aligned_cols=73 Identities=18% Similarity=0.223 Sum_probs=48.3
Q ss_pred eeccccCceEEEEEEeCC-CcEEEEEEcCCCchhhHHHHHHHHHHHhccCCCCc-cceeeEEEccCceEEEEeccCCCCh
Q 003847 481 YILGASGSSIMYKAVLED-GTALAVRRIGENSVDRFRDFETQVRVIAKLVHPNL-VRIRGFYWGVDEKLIIYDFVPNGSL 558 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~-g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~H~nI-v~l~~~~~~~~~~~lv~e~~~~gsL 558 (791)
..|+.|-...+|++...+ +..+++|+....... .-+..+|..+++.|...++ .++++++. + .+||||++|.+|
T Consensus 114 ~~lsgG~tN~~y~v~~~~~~~~~vLRi~g~~~~~-~idR~~E~~vl~~L~~~gl~P~ll~~~~--~--G~v~e~I~G~~l 188 (458)
T 2qg7_A 114 QIINGGITNILIKVKDMSKQAKYLIRLYGPKTDE-IINREREKKISCILYNKNIAKKIYVFFT--N--GRIEEFMDGYAL 188 (458)
T ss_dssp EEECC--CEEEEEEEETTTTEEEEEEEECC-CCS-CSCHHHHHHHHHHHTTSSSBCCEEEEET--T--EEEEECCCSEEC
T ss_pred EEcCCCeEeEEEEEEECCCCceEEEEECCCChhh-hcCHHHHHHHHHHHHhcCCCCCEEEEeC--C--eEEEEeeCCccC
Confidence 467888889999998765 578999987543221 1123678888988865444 57777662 2 359999987554
No 445
>3f2s_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics consortium, SGC, hemicholinium-3, alternative splicing, cytoplasm; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 3g15_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=96.38 E-value=0.0083 Score=64.73 Aligned_cols=140 Identities=16% Similarity=0.133 Sum_probs=81.8
Q ss_pred eccccCceEEEEEEeCC--------CcEEEEEEcCCCchh------------hH------HHHHHHHHHHhccC-CCCcc
Q 003847 482 ILGASGSSIMYKAVLED--------GTALAVRRIGENSVD------------RF------RDFETQVRVIAKLV-HPNLV 534 (791)
Q Consensus 482 ~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~------------~~------~~~~~E~~~l~~l~-H~nIv 534 (791)
.|..|-...+|++...+ ++.|.+++....... +. +....|..+++.+. +--..
T Consensus 59 ~l~gGlTN~~~~v~~~~~~~~~~~~~~~~llRi~G~~te~~~~~~~~~~~idR~~~~~~~~~~~~E~~~l~~L~~~Gi~P 138 (401)
T 3f2s_A 59 VIRGGLSNMLFQCSLPDTTATLGDEPRKVLLRLYGAILQMRSCNKEGSEQAQKENEFQGAEAMVLESVMFAILAERSLGP 138 (401)
T ss_dssp EEECSSEEEEEEEECCTTCCCSSSCCSEEEEEEEEC-----------------------CHHHHHHHHHHHHHHHTTSSC
T ss_pred EcCCCccCceEEEEeCCCcccccCCCccEEEEeCCCCcccccccccccchhhhhhhhccchhhHHHHHHHHHHHhcCCCC
Confidence 45567778899988653 367888887543211 11 12235888888874 44456
Q ss_pred ceeeEEEccCceEEEEeccCCCChhH--H---------------HHhhcCCCCCCCC--HHHHHHHHHHHH---------
Q 003847 535 RIRGFYWGVDEKLIIYDFVPNGSLAN--A---------------RYRKMGSSPCHLP--WEARLKIAKGVA--------- 586 (791)
Q Consensus 535 ~l~~~~~~~~~~~lv~e~~~~gsL~~--~---------------l~~~~~~~~~~l~--~~~~~~i~~qi~--------- 586 (791)
++++++.+ .+|+||++|-+|.. + ++........... +..+.++..++.
T Consensus 139 kl~~~~~~----G~i~efI~G~~L~~~dl~~p~~~~~iA~~L~~LH~~~~~~~~~~~~l~~~i~~~~~~l~~~~~~~~~~ 214 (401)
T 3f2s_A 139 KLYGIFPQ----GRLEQFIPSRRLDTEELSLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLKEVLRIKFTEESR 214 (401)
T ss_dssp CEEEEETT----EEEEECCCEEECCGGGGGSHHHHHHHHHHHHHHHTCCCSSCCSCCHHHHHHHHHHHHHHHCCCCSHHH
T ss_pred eEEEEeCC----CeEEEecCCccCCHHHHhhHHHHHHHHHHHHHHhCCCCCCCCCcchHHHHHHHHHHHHHhccCcchhh
Confidence 77777643 28999999765522 0 1111000011122 334444444332
Q ss_pred -------------HHHH----HHhc----CCCeecCCCCCCeEecCC------CCeEEeccCcccc
Q 003847 587 -------------RGLA----FLHE----KKHVHGNLKPRNVLLGND------MEPKIGDFGLERL 625 (791)
Q Consensus 587 -------------~gL~----yLH~----~~ivHrDlkp~NILl~~~------~~~kL~DFGla~~ 625 (791)
.-+. +|.. ..++|+|+.+.||+++.+ +.+.++||..+..
T Consensus 215 ~~~~~~~~~~~l~~e~~~l~~~l~~~~~~~v~~H~Dl~~~Nil~~~~~~~~~~~~~~lID~E~a~~ 280 (401)
T 3f2s_A 215 IKKLHKLLSYNLPLELENLRSLLESTPSPVVFCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHTSCCCEEEECSCCCGGGEEEETTGGGCSSSCEEECCCTTCEE
T ss_pred hhhhhhhhhHHHHHHHHHHHHHHhhcCCCeeEEeccCCcccEEEcCCcccCcccceEEEeeccCCc
Confidence 1122 2322 358999999999999876 7899999998764
No 446
>3mes_A Choline kinase; malaria, structural genomics, structural genomics consortium, SGC, transferase; HET: ADP DME PT3; 2.35A {Cryptosporidium parvum}
Probab=95.97 E-value=0.009 Score=65.08 Aligned_cols=139 Identities=12% Similarity=0.113 Sum_probs=84.0
Q ss_pred eeccccCceEEEEEEeCC--------CcEEEEEEcCCCchhhHHHHHHHHHHHhccC-CCCccceeeEEEccCceEEEEe
Q 003847 481 YILGASGSSIMYKAVLED--------GTALAVRRIGENSVDRFRDFETQVRVIAKLV-HPNLVRIRGFYWGVDEKLIIYD 551 (791)
Q Consensus 481 ~~lG~G~~g~Vy~~~~~~--------g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~-H~nIv~l~~~~~~~~~~~lv~e 551 (791)
..+..|-...+|++...+ ++.+++|+....... .-+.++|.++++.+. +.-..++++.+ . -++|||
T Consensus 76 ~~lsGG~TN~~y~v~~~~~~~~~~~~~~~~vlRi~g~~t~~-~idR~~E~~~l~~L~~~gi~P~l~~~~--~--~~~I~e 150 (424)
T 3mes_A 76 KQIFSGLTNQLFVVSIVNESMSLSLKHPRILFRIYGKHVGK-FYDSKVELDVFRYLSNINIAPNIIADF--P--EGRIEE 150 (424)
T ss_dssp EEECCCSSSEEEEEEECCC-----CCCSEEEEEECCCCC-C-CCCHHHHHHHHHHHHHTTSSCCEEEEE--T--TEEEEE
T ss_pred EEcCCCcccceEEEEeCCCcccccCCCCeEEEEECCCCcch-hcCHHHHHHHHHHHHhcCCCCCEEEEc--C--CCEEEE
Confidence 356677788999998653 588999997654321 223467888888774 33345666533 2 378999
Q ss_pred ccCCCChhH-----------------HHHhhcC------C--CCCCCCHHHHHHHHHHHH-------------------H
Q 003847 552 FVPNGSLAN-----------------ARYRKMG------S--SPCHLPWEARLKIAKGVA-------------------R 587 (791)
Q Consensus 552 ~~~~gsL~~-----------------~l~~~~~------~--~~~~l~~~~~~~i~~qi~-------------------~ 587 (791)
|++|.+|.. .++.... . ...+.-+.++.++..++- .
T Consensus 151 fI~G~~l~~~~l~~~~~~~~ia~~La~LH~~~~~~~~L~~~~~~~p~~~~~i~~w~~~~~~~~~~~~~~~~~~~~~~l~~ 230 (424)
T 3mes_A 151 FIDGEPLTTKQLQLTHICVEVAKNMGSLHIINSKRADFPSRFDKEPILFKRIYLWREEAKIQVSKNNFQIDKELYSKILE 230 (424)
T ss_dssp CCCSEECCTGGGGSHHHHHHHHHHHHHHHTHHHHCTTSCTTSCCSCCHHHHHHHHHHHHHHHHHTCC--CCHHHHHHHHH
T ss_pred EeCCccCChhhcCCHHHHHHHHHHHHHHhcCchhhccCccccCCCCcHHHHHHHHHHHHHHhhcccchhhccccHHHHHH
Confidence 999866421 0111110 0 111123444444443321 2
Q ss_pred HHHHHh--------------------c----CCCeecCCCCCCeEecCCCCeEEeccCcccc
Q 003847 588 GLAFLH--------------------E----KKHVHGNLKPRNVLLGNDMEPKIGDFGLERL 625 (791)
Q Consensus 588 gL~yLH--------------------~----~~ivHrDlkp~NILl~~~~~~kL~DFGla~~ 625 (791)
.+++|. . ..++|+|+.+.||+ +.++.+.++||..+..
T Consensus 231 e~~~L~~~l~~~~~~~~~r~~~~~~~~~~~~~~~~H~D~~~~N~l-~~~~~~~~IDwe~a~~ 291 (424)
T 3mes_A 231 EIDQLEELIMGGEKFSMERALELKLYSPAFSLVFAHNDLQENNLL-QTQNNIRMIDYEYSAI 291 (424)
T ss_dssp HHHHHHHHHHTSSCCCHHHHHHHHTTCGGGCEEEECSCCCGGGEE-ECSSCEEECCCTTCEE
T ss_pred HHHHHHHHHhhhcccccccccccccccCCCCceEECCCCCcccee-cCCCcEEEEecccCCc
Confidence 223332 1 34899999999999 7888999999998764
No 447
>2k1k_A Ephrin type-A receptor 1; EPHA1, receptor tyrosine kinase, dimeric transmembrane domain, ATP-binding, glycoprotein, nucleotide-binding; NMR {Homo sapiens} PDB: 2k1l_A
Probab=93.74 E-value=0.015 Score=39.08 Aligned_cols=31 Identities=26% Similarity=0.570 Sum_probs=22.1
Q ss_pred CCCCCCccEEEeehHHHHHHHHHHHHHhhhe
Q 003847 340 SQGLRPGTIIGIVIGDIAGIGILAVVFFYVY 370 (791)
Q Consensus 340 ~~~~~~~~ii~iv~g~~~~i~l~~~v~~~~~ 370 (791)
+.+.+...+.+||+|+++++++++.+++++|
T Consensus 5 ~~~ls~GaIAGiVvG~v~gv~li~~l~~~~~ 35 (38)
T 2k1k_A 5 SRGLTGGEIVAVIFGLLLGAALLLGILVFRS 35 (38)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCceeeeehHHHHHHHHHHHHHHHHe
Confidence 3456677889999999888877666555443
No 448
>3g15_A CK, chetk-alpha, choline kinase alpha; non-protein kinase, structural genomics CONS SGC, hemicholinium-3, transferase; HET: ADP HC6; 1.70A {Homo sapiens} PDB: 3f2r_A* 2i7q_A 2cko_A 2ckp_A* 2ckq_A*
Probab=93.34 E-value=0.17 Score=54.74 Aligned_cols=29 Identities=21% Similarity=0.339 Sum_probs=24.9
Q ss_pred CeecCCCCCCeEe------cCCCCeEEeccCcccc
Q 003847 597 HVHGNLKPRNVLL------GNDMEPKIGDFGLERL 625 (791)
Q Consensus 597 ivHrDlkp~NILl------~~~~~~kL~DFGla~~ 625 (791)
++|+|+.+.|||+ +++..++++||.+|..
T Consensus 246 fcHnDl~~gNil~~~~~~~~~~~~l~vIDwEya~~ 280 (401)
T 3g15_A 246 FCHNDCQEGNILLLEGRENSEKQKLMLIDFEYSSY 280 (401)
T ss_dssp EECSCCCGGGEEEETTGGGCSSCCEEECCCTTCEE
T ss_pred eEEecCCCCeEEEecCcccCcCCeEEEechHhccC
Confidence 5799999999999 4567799999998764
No 449
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=89.96 E-value=0.087 Score=36.45 Aligned_cols=11 Identities=45% Similarity=0.597 Sum_probs=4.8
Q ss_pred eehHHHHHHHH
Q 003847 351 IVIGDIAGIGI 361 (791)
Q Consensus 351 iv~g~~~~i~l 361 (791)
|++|+++++++
T Consensus 12 IA~gVVgGv~~ 22 (44)
T 2l2t_A 12 IAAGVIGGLFI 22 (44)
T ss_dssp HHHHHHHHHHH
T ss_pred EEEeehHHHHH
Confidence 44444444433
No 450
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=89.52 E-value=0.11 Score=36.00 Aligned_cols=11 Identities=18% Similarity=0.377 Sum_probs=4.9
Q ss_pred eehHHHHHHHH
Q 003847 351 IVIGDIAGIGI 361 (791)
Q Consensus 351 iv~g~~~~i~l 361 (791)
|++|+++++++
T Consensus 13 IA~gVVgGv~~ 23 (44)
T 2ks1_B 13 IATGMVGALLL 23 (44)
T ss_dssp STHHHHHHHHH
T ss_pred EEeehhHHHHH
Confidence 44444444443
No 451
>2ks1_B Epidermal growth factor receptor; ERBB1, ERBB2, transmembrane, heterodimer, complex, tyrosine receptor, bicelles, transferase; NMR {Homo sapiens}
Probab=88.58 E-value=0.2 Score=34.78 Aligned_cols=23 Identities=13% Similarity=0.109 Sum_probs=12.6
Q ss_pred cEEEeehHHHHHHHHHHHHHhhh
Q 003847 347 TIIGIVIGDIAGIGILAVVFFYV 369 (791)
Q Consensus 347 ~ii~iv~g~~~~i~l~~~v~~~~ 369 (791)
.|.+.|+|.++++++++++++++
T Consensus 12 ~IA~gVVgGv~~~~ii~~~~~~~ 34 (44)
T 2ks1_B 12 SIATGMVGALLLLLVVALGIGLF 34 (44)
T ss_dssp SSTHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEeehhHHHHHHHHHHHHHHHH
Confidence 45555666566666655544443
No 452
>2l2t_A Receptor tyrosine-protein kinase ERBB-4; transmembrane dimer, membrane domain, membrane protei; NMR {Homo sapiens}
Probab=87.96 E-value=0.13 Score=35.63 Aligned_cols=27 Identities=26% Similarity=0.251 Sum_probs=15.8
Q ss_pred CccEEEeehHHHHHHHHHHHHHhhhee
Q 003847 345 PGTIIGIVIGDIAGIGILAVVFFYVYR 371 (791)
Q Consensus 345 ~~~ii~iv~g~~~~i~l~~~v~~~~~~ 371 (791)
...|.+.|+|.++++++++++++++++
T Consensus 9 ~~aIA~gVVgGv~~v~ii~~~~~~~~R 35 (44)
T 2l2t_A 9 TPLIAAGVIGGLFILVIVGLTFAVYVR 35 (44)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEEEeehHHHHHHHHHHHHHHHHhh
Confidence 345666677766666666655444333
No 453
>4ann_A ESSB; membrane protein, membrane secretion, ESS type VII secretion virulence; 1.05A {Staphylococcus aureus subsp}
Probab=84.63 E-value=3.8 Score=39.41 Aligned_cols=85 Identities=15% Similarity=0.093 Sum_probs=60.1
Q ss_pred CCCCccceeeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHHHhcCCCeecCCCCCCeE
Q 003847 529 VHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLAFLHEKKHVHGNLKPRNVL 608 (791)
Q Consensus 529 ~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~yLH~~~ivHrDlkp~NIL 608 (791)
.||+++.. .+-.+.+...+.++.-+ +...+-.-. .++...+++++.+|+...++++ .-+|--|.|+||+
T Consensus 43 ~~~~Fl~~-~I~e~eD~v~~~y~~~~--~~~~f~~ik------~~~~~eKlr~l~ni~~l~~~~~--~r~tf~L~P~NL~ 111 (215)
T 4ann_A 43 HSPYFIDA-ELTELRDSFQIHYDIND--NHTPFDNIK------SFTKNEKLRYLLNIKNLEEVNR--TRYTFVLAPDELF 111 (215)
T ss_dssp CCTTBCCE-EEEECSSEEEEEECCCT--TSEEGGGGG------GSCHHHHHHHHHHGGGGGGGGG--SSEECCCSGGGEE
T ss_pred cCCcccce-EEEEcccEEEEEEEcCc--ccCCHHHHH------hcCHHHHHHHHHHHHHHHHHhc--CceEEEEecceEE
Confidence 68888877 45556665555555433 333332222 2788999999999988775444 3468889999999
Q ss_pred ecCCCCeEEeccCccc
Q 003847 609 LGNDMEPKIGDFGLER 624 (791)
Q Consensus 609 l~~~~~~kL~DFGla~ 624 (791)
++.++.+++.-.|+-.
T Consensus 112 f~~~~~p~i~~RGik~ 127 (215)
T 4ann_A 112 FTRDGLPIAKTRGLQN 127 (215)
T ss_dssp ECTTSCEEESCCEETT
T ss_pred EcCCCCEEEEEccCcc
Confidence 9999999998877643
No 454
>2k9y_A Ephrin type-A receptor 2; receptor tyrosine kinase, membrane protein, dimeric transmembrane domain, ephrin receptor, ATP-binding, glycoprotein; NMR {Homo sapiens}
Probab=84.05 E-value=0.33 Score=33.29 Aligned_cols=15 Identities=20% Similarity=0.445 Sum_probs=8.8
Q ss_pred EEeehHHHHHHHHHH
Q 003847 349 IGIVIGDIAGIGILA 363 (791)
Q Consensus 349 i~iv~g~~~~i~l~~ 363 (791)
.+|++|+++++++++
T Consensus 13 ~~I~~~vv~Gv~ll~ 27 (41)
T 2k9y_A 13 LAVIGGVAVGVVLLL 27 (41)
T ss_dssp THHHHHHHHHHHHHH
T ss_pred EEEEeehhHHHHHHH
Confidence 345666666666555
No 455
>4ano_A ESSB; membrane protein, membrane secretion, ESS type V secretion S; HET: MSE; 1.70A {Geobacillus thermodenitrificans ng80-2organism_taxid}
Probab=81.93 E-value=4.4 Score=39.11 Aligned_cols=87 Identities=15% Similarity=0.165 Sum_probs=61.3
Q ss_pred CCCCccceeeEEEccCceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHH-HHhcCCCeecCCCCCCe
Q 003847 529 VHPNLVRIRGFYWGVDEKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGVARGLA-FLHEKKHVHGNLKPRNV 607 (791)
Q Consensus 529 ~H~nIv~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi~~gL~-yLH~~~ivHrDlkp~NI 607 (791)
.||++ -..+-.+++...+.++.-+++.=...+. .++..++++++.+|+...+ ++ ..-+|--|.|+||
T Consensus 48 ~~~~f--~~~I~~~eD~~~i~y~~~~~~~~f~~i~--------~~~~~eKlrll~nl~~L~~~~~--~~r~tf~l~P~NL 115 (219)
T 4ano_A 48 VDPCI--VRDIDVSEDEVKVVIKPPSSFLTFAAIR--------KTTLLSRIRAAIHLVSKVKHHS--ARRLIFIVCPENL 115 (219)
T ss_dssp SCSSS--EEEEEECSSEEEEEEECCTTCEEHHHHH--------TSCHHHHHHHHHHHHHHHSSCC--SSSEECCCCGGGE
T ss_pred cCCCC--CeEEEEeCCEEEEEEEcCcccCcHHHHH--------hcCHHHHHHHHHHHHHHHHHhh--hCceeEEEeCceE
Confidence 57887 4444456666666666543332222222 2788999999999887555 44 4457888999999
Q ss_pred EecCCCCeEEeccCcccccC
Q 003847 608 LLGNDMEPKIGDFGLERLVT 627 (791)
Q Consensus 608 Ll~~~~~~kL~DFGla~~~~ 627 (791)
++|.++.+++.-.|+-..+.
T Consensus 116 ~f~~~~~p~i~hRGi~~~lp 135 (219)
T 4ano_A 116 MFNRALEPFFLHVGVKESLP 135 (219)
T ss_dssp EECTTCCEEESCCEETTTBS
T ss_pred EEeCCCcEEEEEcCCcccCC
Confidence 99999999999999866554
No 456
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=80.41 E-value=0.25 Score=34.08 Aligned_cols=7 Identities=57% Similarity=0.985 Sum_probs=3.7
Q ss_pred EEEeehH
Q 003847 348 IIGIVIG 354 (791)
Q Consensus 348 ii~iv~g 354 (791)
++++++|
T Consensus 14 Ia~~vVG 20 (44)
T 2jwa_A 14 IISAVVG 20 (44)
T ss_dssp HHHHHHH
T ss_pred hHHHHHH
Confidence 4455555
No 457
>2klu_A T-cell surface glycoprotein CD4; cell membrane, disulfide bond, HOST- virus interaction, immune response, immunoglobulin domain, lipoprotein; NMR {Homo sapiens}
Probab=72.41 E-value=1.6 Score=32.58 Aligned_cols=28 Identities=25% Similarity=0.426 Sum_probs=15.4
Q ss_pred eehHHHHHHHHHHHHHhh-heeecccccc
Q 003847 351 IVIGDIAGIGILAVVFFY-VYRLIKRKNV 378 (791)
Q Consensus 351 iv~g~~~~i~l~~~v~~~-~~~~~~rr~~ 378 (791)
||+|.++++++++-+.++ +.++++|+++
T Consensus 12 ivlGg~~~lll~~glcI~ccvkcrhRrrq 40 (70)
T 2klu_A 12 IVLGGVAGLLLFIGLGIFFSVRSRHRRRQ 40 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSCCSSS
T ss_pred HHHhHHHHHHHHHHHHHHHhhHHHHHHHH
Confidence 677777777666555444 3333344443
No 458
>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A
Probab=69.86 E-value=0.53 Score=51.79 Aligned_cols=54 Identities=9% Similarity=0.140 Sum_probs=14.6
Q ss_pred ceEEEEEEeCC-CcEEEE------EEcCCCc--hhhHHHHHHHHHHHhccCCCCccceeeEEE
Q 003847 488 SSIMYKAVLED-GTALAV------RRIGENS--VDRFRDFETQVRVIAKLVHPNLVRIRGFYW 541 (791)
Q Consensus 488 ~g~Vy~~~~~~-g~~vav------K~~~~~~--~~~~~~~~~E~~~l~~l~H~nIv~l~~~~~ 541 (791)
||.||++.+.. ..+||| |..+... .+....+.+|..+++.++|||+++.+++..
T Consensus 152 fG~v~~g~~~~~~~~Vav~~~~~~K~~~~~~~~~e~~~~~~rea~l~~~~~H~niv~~h~f~~ 214 (463)
T 3cxl_A 152 YTTLNREPAYKKHMPVLKETHDERDSTGQDGVSEKRLTSLVRRATLKENEQIPKYEKIHNFKV 214 (463)
T ss_dssp BCCC---------CCBGGGC-----------------------------------CBCCCEEE
T ss_pred chhhhcccccccCCchhhhhccCccccccccccccccccccccccccccccccccCCCcceEE
Confidence 99999999653 468888 7765532 233456888999999999999999988764
No 459
>2x6h_A GH13170P, VPS34, phosphotidylinositol 3 kinase 59F; transferase; 2.90A {Drosophila melanogaster} PDB: 2x6f_A 2x6i_A* 2x6j_A* 2x6k_A*
Probab=69.80 E-value=91 Score=35.53 Aligned_cols=85 Identities=16% Similarity=0.083 Sum_probs=49.0
Q ss_pred ceeeEEEccCceEEEEeccCCCChhHHHHhh----------cCCCCCC--CCHHHHHHHHHHHH--HHHHHHhcCCCeec
Q 003847 535 RIRGFYWGVDEKLIIYDFVPNGSLANARYRK----------MGSSPCH--LPWEARLKIAKGVA--RGLAFLHEKKHVHG 600 (791)
Q Consensus 535 ~l~~~~~~~~~~~lv~e~~~~gsL~~~l~~~----------~~~~~~~--l~~~~~~~i~~qi~--~gL~yLH~~~ivHr 600 (791)
+.|.+.......-+ .|++++.+|.+++... ....... +....+..++..+| .-+.|+=.- +
T Consensus 477 ~~Y~Vipls~~~GL-IE~V~s~tl~~i~~~~~~l~~~f~~~~p~~~~~~~~~~~ar~nF~~SlA~~Svv~YILGl----G 551 (696)
T 2x6h_A 477 TPYKVLATSSKHGF-LQYVDSCTVAEVLAREGNIHNFFRKHHPCDNGPYGISAEVMDTYIKSCAGYCVITYLLGV----G 551 (696)
T ss_dssp CCCCEEESSTTCEE-EECCCCEEHHHHHHHSSSHHHHHHHHSBCTTSSSSBCHHHHHHHHHHHHHHHHHHHHHTC----C
T ss_pred eccEEEeccCCCCe-eeeCCCccHHHHHHhcChHHHHHHHHCCCccchhhhHHHHHHHHHHHHHHHHHHHHHccC----C
Confidence 34444444444433 3666666666555432 1111101 12244555665554 234444333 6
Q ss_pred CCCCCCeEecCCCCeEEeccCccc
Q 003847 601 NLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 601 Dlkp~NILl~~~~~~kL~DFGla~ 624 (791)
|=.++||||+.+|.+.-+|||.+-
T Consensus 552 DRH~~NILid~tG~v~HIDFG~~f 575 (696)
T 2x6h_A 552 DRHLDNLLLTTNGKLFHIDFGYIL 575 (696)
T ss_dssp CCCTTTEEECTTSCEEECCCCSCT
T ss_pred CCCCcceEEeCCCCEEEEeehhhh
Confidence 888999999999999999999864
No 460
>2jwa_A Receptor tyrosine-protein kinase ERBB-2; transmembrane helix dimer, protein kinase receptor membrane domain, ATP-binding, glycoprotein; NMR {Homo sapiens} PDB: 2ks1_A
Probab=66.47 E-value=1.8 Score=29.84 Aligned_cols=13 Identities=23% Similarity=0.503 Sum_probs=5.6
Q ss_pred EEeehHHHHHHHHH
Q 003847 349 IGIVIGDIAGIGIL 362 (791)
Q Consensus 349 i~iv~g~~~~i~l~ 362 (791)
..|+++ +++++++
T Consensus 12 ~~Ia~~-vVGvll~ 24 (44)
T 2jwa_A 12 TSIISA-VVGILLV 24 (44)
T ss_dssp HHHHHH-HHHHHHH
T ss_pred cchHHH-HHHHHHH
Confidence 334444 4444433
No 461
>3ls8_A Phosphatidylinositol 3-kinase catalytic subunit type 3; alpha/beta protein, PIK3C3, compound 15E, structural genomics, SGC stockholm; HET: AJZ; 2.25A {Homo sapiens} PDB: 3ihy_A
Probab=61.65 E-value=1.2e+02 Score=33.87 Aligned_cols=86 Identities=15% Similarity=0.066 Sum_probs=51.5
Q ss_pred cceeeEEEccCceEEEEeccCCCChhHHHH----------hhcCCCCC--CCCHHHHHHHHHHHHH--HHHHHhcCCCee
Q 003847 534 VRIRGFYWGVDEKLIIYDFVPNGSLANARY----------RKMGSSPC--HLPWEARLKIAKGVAR--GLAFLHEKKHVH 599 (791)
Q Consensus 534 v~l~~~~~~~~~~~lv~e~~~~gsL~~~l~----------~~~~~~~~--~l~~~~~~~i~~qi~~--gL~yLH~~~ivH 599 (791)
++.|.+.......-+ .|++++.++.+.+. ........ ...+..+..++..+|- -+.|+=.-
T Consensus 402 i~~Y~Vipls~~~Gl-IE~V~~~tl~~il~~~~~l~~~f~~~~~~~~~~~~~~~~a~~nF~~S~A~ySvv~YILGi---- 476 (614)
T 3ls8_A 402 LTPYKVLATSTKHGF-MQFIQSVPVAEVLDTEGSIQNFFRKYAPSENGPNGISAEVMDTYVKSCAGYCVITYILGV---- 476 (614)
T ss_dssp CCCCCEEESSSSEEE-EECCCCEEHHHHHHHTSSHHHHHHHHSBCTTSGGGBCHHHHHHHHHHHHHHHHHHHHHTC----
T ss_pred eeccEEEEecCCCce-EEEeCCccHHHHHHccChHHHHHHHhCCCccccccccHHHHHHHHHHHHHHhHhheeeec----
Confidence 445555555444444 47777655555443 22111100 1235566666666543 34555433
Q ss_pred cCCCCCCeEecCCCCeEEeccCccc
Q 003847 600 GNLKPRNVLLGNDMEPKIGDFGLER 624 (791)
Q Consensus 600 rDlkp~NILl~~~~~~kL~DFGla~ 624 (791)
+|=.++|||++.+|.+.=+|||.+-
T Consensus 477 gDRH~~NILld~tG~v~HIDFG~~f 501 (614)
T 3ls8_A 477 GDRHLDNLLLTKTGKLFHIDFGYIL 501 (614)
T ss_dssp CCCCTTSEEECTTSCEEECCCSSCT
T ss_pred cCCCCcceeEcCCCCEeeeehHHhh
Confidence 5778999999999999999999874
No 462
>2l34_A TYRO protein tyrosine kinase-binding protein; immunoreceptor, transmembrane assembly, DAP12, protein bindi; NMR {Homo sapiens} PDB: 2l35_B
Probab=54.66 E-value=3.6 Score=26.53 Aligned_cols=26 Identities=31% Similarity=0.782 Sum_probs=17.0
Q ss_pred CCCccEEEeehHHHHHHHHHHHHHhh
Q 003847 343 LRPGTIIGIVIGDIAGIGILAVVFFY 368 (791)
Q Consensus 343 ~~~~~ii~iv~g~~~~i~l~~~v~~~ 368 (791)
.+.+++.+|++|.+++++++++.+++
T Consensus 4 L~~gaIaGIVvgdi~~t~~i~~~vy~ 29 (33)
T 2l34_A 4 VSPGVLAGIVVGDLVLTVLIALAVYF 29 (33)
T ss_dssp CCTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcceEEeEeHHHHHHHHHHHHHHhh
Confidence 34566778888887777665554443
No 463
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=48.06 E-value=31 Score=28.57 Aligned_cols=38 Identities=16% Similarity=0.156 Sum_probs=16.2
Q ss_pred ccccCCCCccEEEccCCcCCCCCccccCCCCCCCEEeCc
Q 003847 123 FSLFNASQLRNLDLSNNLISGHLPETMGSLHNLQLLNLS 161 (791)
Q Consensus 123 ~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~ls 161 (791)
..|.++++|+.+.|..+ ++.+-...|.++.+|+.+.|.
T Consensus 14 ~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~ 51 (100)
T 2lz0_A 14 SLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILT 51 (100)
T ss_dssp CTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEEC
T ss_pred HHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEc
Confidence 34444444444444433 221333344444444444443
No 464
>2knc_B Integrin beta-3; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=42.22 E-value=5.7 Score=31.46 Aligned_cols=24 Identities=8% Similarity=0.409 Sum_probs=15.1
Q ss_pred EEEeehHHHHHHHHHHHHHhhhee
Q 003847 348 IIGIVIGDIAGIGILAVVFFYVYR 371 (791)
Q Consensus 348 ii~iv~g~~~~i~l~~~v~~~~~~ 371 (791)
+.+|++|++++++++.++++++|+
T Consensus 10 ~~~Iv~gvi~gilliGllllliwk 33 (79)
T 2knc_B 10 ILVVLLSVMGAILLIGLAALLIWK 33 (79)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHH
Confidence 355667777777766666555544
No 465
>1afo_A Glycophorin A; integral membrane protein, transmembrane helix interactions, membrane protein folding; NMR {Homo sapiens} SCOP: j.35.1.1 PDB: 2kpf_A
Probab=39.27 E-value=7.6 Score=25.62 Aligned_cols=28 Identities=25% Similarity=0.266 Sum_probs=17.0
Q ss_pred CCccEEEeehHHHHHHHHHHHHHhhhee
Q 003847 344 RPGTIIGIVIGDIAGIGILAVVFFYVYR 371 (791)
Q Consensus 344 ~~~~ii~iv~g~~~~i~l~~~v~~~~~~ 371 (791)
+...++.|+.|+++|+.-..+.+.|+.+
T Consensus 8 s~p~i~lII~~vmaGiIG~IllI~y~I~ 35 (40)
T 1afo_A 8 SEPEITLIIFGVMAGVIGTILLISYGIR 35 (40)
T ss_dssp SCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3346677788888876655554445433
No 466
>2lz0_A Uncharacterized protein; hypothetical leucine rich repeat protein, structural genomic unknown function; NMR {Bacteroides capillosus}
Probab=38.84 E-value=61 Score=26.70 Aligned_cols=50 Identities=10% Similarity=0.053 Sum_probs=37.7
Q ss_pred CCCCccCCCcCCCCCCCCCEEeCcCCCCCCCCcccccCCCCccEEEccCCc
Q 003847 90 NSQLLGSIPADLGMIEFLQYLDLSNNSLNGSLSFSLFNASQLRNLDLSNNL 140 (791)
Q Consensus 90 ~~~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~p~~~~~l~~L~~L~L~~N~ 140 (791)
+.+++.+-...|.++++|+.+.|-.+ ++.+-...|.++.+|+.+.|....
T Consensus 5 g~~vt~I~~~aF~~c~~L~~i~iP~~-v~~Ig~~aF~~C~~L~~i~~~~~~ 54 (100)
T 2lz0_A 5 GEPVVGMDKSLFAGNTVIREITVQPN-IGLLYDGMFSGCTALEKLILTGED 54 (100)
T ss_dssp CCCCCSSCSCTTTTCTTCCCEEECTT-SSCCCTTSSTTCTTCCCEEECCSC
T ss_pred CCccCEecHHHhcCCCCCcEEEcCCc-hheEcHHHHhccCCccEEEEcCCC
Confidence 44566666778888899999988875 444667788899999998887643
No 467
>1cja_A Protein (actin-fragmin kinase); transferase; HET: AMP; 2.90A {Physarum polycephalum} SCOP: d.144.1.3
Probab=29.25 E-value=2.3e+02 Score=29.04 Aligned_cols=75 Identities=11% Similarity=0.024 Sum_probs=42.6
Q ss_pred ceEEEEeccCCCChhHHHHhhcCCCCCCCCHHHHHHHHHHH--HHHHHHHhcCC----C-eecCCCCCCeEecCCCC-eE
Q 003847 545 EKLIIYDFVPNGSLANARYRKMGSSPCHLPWEARLKIAKGV--ARGLAFLHEKK----H-VHGNLKPRNVLLGNDME-PK 616 (791)
Q Consensus 545 ~~~lv~e~~~~gsL~~~l~~~~~~~~~~l~~~~~~~i~~qi--~~gL~yLH~~~----i-vHrDlkp~NILl~~~~~-~k 616 (791)
..+++|+|.+|..|.+.-..... ..+..+ .+.++ +-+++++..+. . .+.--.++|||++.++. +.
T Consensus 156 ~~~l~meyv~G~~L~e~~~~~~~---~~f~~~----~~k~LG~Ii~FDi~InN~DR~Pl~W~n~GN~~NIL~~~~n~~~~ 228 (342)
T 1cja_A 156 ANILLMELVRGITLNKLTTTSAP---EVLTKS----TMQQLGSLMALDVIVNNSDRLPIAWTNEGNLDNIMLSERGATVV 228 (342)
T ss_dssp SEEEEEECCCEEESTTCCSSSHH---HHSCHH----HHHHHHHHHHHHHHHTCCSSSCSSSCSCCCGGGEEEESBTTCEE
T ss_pred cceehhhhcCCCccccchhhhhh---hhcCHH----HHHhhchhheehhhhcCCccCcccccCCCChhheEEeCCCCeEE
Confidence 45699999987776542111000 002222 22332 34556666532 1 22235789999987554 89
Q ss_pred EeccCccccc
Q 003847 617 IGDFGLERLV 626 (791)
Q Consensus 617 L~DFGla~~~ 626 (791)
++|-+.+..-
T Consensus 229 ~IDhn~af~~ 238 (342)
T 1cja_A 229 PIDSKIIPLD 238 (342)
T ss_dssp ECSCCCCCCC
T ss_pred EEcCCccccC
Confidence 9999998654
No 468
>2k1a_A Integrin alpha-IIB; single-PASS transmembrane segment, alternative splicing, calcium, cell adhesion, cleavage on PAIR of basic residues; NMR {Homo sapiens} PDB: 2k9j_A
Probab=26.73 E-value=24 Score=24.10 Aligned_cols=22 Identities=14% Similarity=0.487 Sum_probs=12.3
Q ss_pred EEeehHHHHHHHHHHHHHhhhe
Q 003847 349 IGIVIGDIAGIGILAVVFFYVY 370 (791)
Q Consensus 349 i~iv~g~~~~i~l~~~v~~~~~ 370 (791)
..|++++++++++++++.+..|
T Consensus 11 wiIi~s~l~GLllL~li~~~Lw 32 (42)
T 2k1a_A 11 WWVLVGVLGGLLLLTILVLAMW 32 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3355566666666665554444
No 469
>2l8s_A Integrin alpha-1; transmembrane region, detergent micelle, CE adhesion; NMR {Homo sapiens}
Probab=25.35 E-value=26 Score=25.24 Aligned_cols=21 Identities=19% Similarity=0.480 Sum_probs=11.7
Q ss_pred EeehHHHHHHHHHHHHHhhhe
Q 003847 350 GIVIGDIAGIGILAVVFFYVY 370 (791)
Q Consensus 350 ~iv~g~~~~i~l~~~v~~~~~ 370 (791)
.|++++++|+++++++++..|
T Consensus 11 iIi~svl~GLLLL~Lii~~Lw 31 (54)
T 2l8s_A 11 VILLSAFAGLLLLMLLILALW 31 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 345566666666655554444
No 470
>1cd1_A CD1, MCD1D.1; immunology, MHC, TCR, glycoprotein, signal, immunoglobulin fold, T-cell; 2.67A {Mus musculus} SCOP: b.1.1.2 d.19.1.1
Probab=24.60 E-value=16 Score=37.58 Aligned_cols=10 Identities=20% Similarity=-0.031 Sum_probs=0.0
Q ss_pred eehHHHHHHH
Q 003847 351 IVIGDIAGIG 360 (791)
Q Consensus 351 iv~g~~~~i~ 360 (791)
|++|++++++
T Consensus 286 i~~~vi~~l~ 295 (315)
T 1cd1_A 286 IVFIVLIMLV 295 (315)
T ss_dssp ----------
T ss_pred eehhHHHHHH
Confidence 3334433333
No 471
>2k9j_B Integrin beta-3; transmembrane complex, cell adhesion, cleavage on basic residues, disease mutation, glycoprotein, pyrrolidone carboxylic acid; NMR {Homo sapiens} PDB: 2rmz_A 2rn0_A 2l91_A
Probab=23.11 E-value=28 Score=23.90 Aligned_cols=24 Identities=8% Similarity=0.409 Sum_probs=14.5
Q ss_pred EEEeehHHHHHHHHHHHHHhhhee
Q 003847 348 IIGIVIGDIAGIGILAVVFFYVYR 371 (791)
Q Consensus 348 ii~iv~g~~~~i~l~~~v~~~~~~ 371 (791)
+.+|+.|++++++++.+++..+|+
T Consensus 9 ~~~Iv~gvi~~ivliGl~lLliwk 32 (43)
T 2k9j_B 9 ILVVLLSVMGAILLIGLAALLIWK 32 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EeehHHHHHHHHHHHHHHHHHHHH
Confidence 345666777776666665555544
No 472
>2knc_A Integrin alpha-IIB; transmembrane signaling, protein structure, cell A cleavage on PAIR of basic residues, disease mutation, disul bond, glycoprotein; NMR {Homo sapiens}
Probab=21.82 E-value=33 Score=24.76 Aligned_cols=23 Identities=13% Similarity=0.505 Sum_probs=12.6
Q ss_pred EEeehHHHHHHHHHHHHHhhhee
Q 003847 349 IGIVIGDIAGIGILAVVFFYVYR 371 (791)
Q Consensus 349 i~iv~g~~~~i~l~~~v~~~~~~ 371 (791)
..|++++++|+++++++++..|.
T Consensus 13 wiIi~svl~GLllL~li~~~LwK 35 (54)
T 2knc_A 13 WWVLVGVLGGLLLLTILVLAMWK 35 (54)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 33555666666666555554443
Done!