Query 003853
Match_columns 791
No_of_seqs 551 out of 2182
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 06:11:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003853.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003853hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ygq_A WIF-1, WNT inhibitory f 99.7 4.2E-18 1.4E-22 184.6 8.5 160 117-311 145-311 (324)
2 3fcs_B Integrin beta-3; beta p 99.6 5.7E-15 1.9E-19 173.7 11.3 156 126-312 447-632 (690)
3 3k6s_B Integrin beta-2; cell r 99.5 1.9E-15 6.5E-20 177.2 5.1 136 125-308 435-592 (687)
4 2vj2_A Jagged-1; signalling, p 99.4 5.9E-14 2E-18 138.0 5.0 142 100-308 16-169 (169)
5 2gy5_A Angiopoietin-1 receptor 99.4 4.9E-13 1.7E-17 149.8 7.7 153 119-311 194-353 (423)
6 3k6s_B Integrin beta-2; cell r 99.3 6E-13 2.1E-17 156.1 7.1 132 126-308 483-623 (687)
7 2gy5_A Angiopoietin-1 receptor 99.3 2.2E-12 7.4E-17 144.6 7.5 127 139-310 186-322 (423)
8 2p28_B Integrin beta-2; hybrid 99.3 1.7E-12 5.9E-17 132.1 5.1 62 234-310 143-216 (217)
9 2vj3_A Neurogenic locus notch 99.2 1.1E-11 3.6E-16 117.2 7.5 107 121-310 6-121 (135)
10 2ygq_A WIF-1, WNT inhibitory f 99.2 1.5E-11 5.2E-16 133.1 6.6 123 120-275 180-309 (324)
11 4d90_A EGF-like repeat and dis 99.2 4.3E-11 1.5E-15 113.9 8.3 75 233-310 57-135 (143)
12 1z1y_A Ookinete surface protei 99.1 8.9E-12 3E-16 124.3 0.2 141 124-311 10-178 (186)
13 3fcs_B Integrin beta-3; beta p 99.1 1.6E-10 5.4E-15 136.0 9.5 160 97-290 451-641 (690)
14 2vj2_A Jagged-1; signalling, p 99.0 2.1E-10 7.1E-15 112.6 4.1 111 137-309 16-130 (169)
15 4fbr_A Lectin, myxobacterial h 99.0 2.8E-12 9.5E-17 133.2 -10.5 169 123-304 36-265 (267)
16 1klo_A Laminin; glycoprotein; 98.9 5.7E-10 2E-14 108.7 5.4 114 126-273 2-145 (162)
17 4aqs_A Laminin subunit beta-1; 98.6 2.9E-08 9.9E-13 114.6 7.0 99 185-308 406-525 (525)
18 2bou_A EGF-like module contain 98.5 3.7E-08 1.3E-12 93.6 4.4 63 235-309 54-135 (143)
19 2wg3_C Hedgehog-interacting pr 98.5 2.2E-08 7.6E-13 113.6 0.3 77 218-311 380-458 (463)
20 1yo8_A Thrombospondin-2; EGF, 98.3 4E-07 1.4E-11 105.8 6.4 151 121-302 4-178 (634)
21 4fbr_A Lectin, myxobacterial h 98.2 6.2E-09 2.1E-13 108.1 -10.1 112 186-310 53-204 (267)
22 3zyj_B Netrin-G1; cell adhesio 98.2 7.3E-07 2.5E-11 98.4 5.7 55 225-300 363-419 (426)
23 1tpg_A T-plasminogen activator 98.2 6.6E-07 2.2E-11 78.3 4.3 51 257-310 31-88 (91)
24 1z1y_A Ookinete surface protei 98.2 1.4E-07 4.7E-12 93.8 -0.6 132 97-275 21-176 (186)
25 1tpg_A T-plasminogen activator 98.1 1.6E-06 5.6E-11 75.8 3.2 84 139-276 3-88 (91)
26 2vj3_A Neurogenic locus notch 98.0 2.5E-06 8.7E-11 80.1 4.4 67 233-309 12-82 (135)
27 2p28_B Integrin beta-2; hybrid 98.0 1.4E-06 4.8E-11 88.5 2.4 62 233-308 95-175 (217)
28 4aqs_A Laminin subunit beta-1; 98.0 1.6E-05 5.5E-10 91.6 11.0 45 261-308 422-475 (525)
29 4d90_A EGF-like repeat and dis 97.9 5.4E-06 1.9E-10 78.3 4.7 69 233-309 5-96 (143)
30 2w86_A Fibrillin-1, fibrillin1 97.9 8.9E-07 3E-11 84.4 -2.0 46 257-306 87-142 (147)
31 1uzk_A Fibrillin-1; glycoprote 97.9 1.7E-06 6E-11 83.8 -0.5 126 121-305 4-156 (162)
32 1aut_L Activated protein C; se 97.8 1.2E-05 4E-10 73.2 5.0 67 121-198 16-87 (114)
33 1klo_A Laminin; glycoprotein; 97.8 5.4E-06 1.9E-10 80.4 2.8 99 97-200 27-145 (162)
34 2wg3_C Hedgehog-interacting pr 97.7 5.6E-06 1.9E-10 93.8 0.8 67 117-202 389-456 (463)
35 1yo8_A Thrombospondin-2; EGF, 97.7 2.1E-05 7.2E-10 91.5 5.0 63 236-308 54-146 (634)
36 1x7a_L Coagulation factor IX, 97.7 2.7E-05 9.4E-10 74.1 4.7 62 121-195 49-116 (146)
37 3u7u_G Neuregulin 1; signaling 97.6 2.6E-05 9E-10 61.2 3.3 43 269-311 1-52 (55)
38 1dx5_I Thrombomodulin; serine 97.6 1E-05 3.6E-10 74.1 -0.1 99 121-271 5-112 (118)
39 2ygo_A WIF-1, WNT inhibitory f 97.5 5E-05 1.7E-09 74.1 4.0 38 116-154 144-181 (188)
40 1nfu_B Coagulation factor XA, 97.5 1.1E-05 3.9E-10 80.3 -0.6 64 121-195 43-111 (195)
41 2e26_A Reelin, reeler protein; 97.5 2.2E-05 7.7E-10 91.2 1.4 50 260-312 520-569 (725)
42 3u7u_G Neuregulin 1; signaling 97.4 7.9E-05 2.7E-09 58.4 3.5 34 121-154 9-50 (55)
43 1edm_B Factor IX; epidermal gr 97.4 0.00015 5.2E-09 52.5 4.2 33 121-153 4-39 (39)
44 2vh0_B Activated factor XA lig 97.4 2.2E-05 7.4E-10 73.7 -0.6 64 121-195 43-111 (134)
45 2c4f_L Coagulation factor VII 97.3 0.00011 3.7E-09 69.6 3.7 71 120-199 47-127 (142)
46 2c4f_L Coagulation factor VII 97.3 6.1E-05 2.1E-09 71.3 1.9 67 233-309 52-130 (142)
47 2ygo_A WIF-1, WNT inhibitory f 97.3 0.00011 3.8E-09 71.7 3.2 40 269-311 143-183 (188)
48 1nfu_B Coagulation factor XA, 97.3 4.9E-05 1.7E-09 75.7 0.6 65 233-309 47-122 (195)
49 2p26_A Integrin beta-2; hybrid 97.3 8.7E-05 3E-09 77.9 2.5 52 256-308 205-275 (280)
50 4aqt_A Laminin subunit gamma-1 97.2 0.00015 5E-09 79.4 3.7 28 126-153 256-287 (375)
51 3h5c_B Vitamin K-dependent pro 97.2 0.00021 7.1E-09 76.6 4.8 66 120-196 5-75 (317)
52 2y38_A Laminin subunit alpha-5 97.2 0.00028 9.4E-09 77.7 5.5 28 126-153 267-301 (403)
53 1x7a_L Coagulation factor IX, 97.1 0.00017 5.8E-09 68.6 2.5 63 233-309 53-127 (146)
54 3h5c_B Vitamin K-dependent pro 97.1 0.0005 1.7E-08 73.6 6.4 60 233-305 10-77 (317)
55 1egf_A Epidermal growth factor 97.1 0.0006 2.1E-08 53.0 5.0 35 121-155 4-46 (53)
56 1a3p_A Epidermal growth factor 97.1 0.00038 1.3E-08 52.1 3.6 29 126-154 10-42 (45)
57 2vh0_B Activated factor XA lig 97.1 0.00011 3.8E-09 68.8 0.6 65 233-309 47-122 (134)
58 3zyj_B Netrin-G1; cell adhesio 97.0 0.00025 8.6E-09 78.3 2.9 43 266-313 360-403 (426)
59 2p26_A Integrin beta-2; hybrid 97.0 0.00028 9.6E-09 74.1 3.0 59 127-196 198-264 (280)
60 1dx5_I Thrombomodulin; serine 97.0 0.00019 6.3E-09 65.7 1.2 44 257-305 60-112 (118)
61 1aut_L Activated protein C; se 96.9 0.00048 1.6E-08 62.5 3.8 61 234-306 20-88 (114)
62 1emn_A Fibrillin; extracellula 96.9 0.00065 2.2E-08 57.8 4.4 58 234-305 12-77 (82)
63 3ca7_A Protein spitz; argos, E 96.8 0.00012 4E-09 56.9 -1.2 40 258-310 3-50 (52)
64 2bou_A EGF-like module contain 96.7 0.00096 3.3E-08 62.8 3.9 61 233-308 6-83 (143)
65 1hae_A Heregulin-alpha; growth 96.7 0.00059 2E-08 55.0 1.9 34 121-154 7-48 (63)
66 1k36_A Epiregulin; EGF-like fo 96.6 0.0011 3.6E-08 50.0 3.1 29 125-154 12-44 (46)
67 1emn_A Fibrillin; extracellula 96.6 0.0012 4.2E-08 56.0 3.8 62 121-197 6-76 (82)
68 3qhp_A Type 1 capsular polysac 96.6 0.0082 2.8E-07 56.8 9.9 94 628-724 65-161 (166)
69 1nql_B Epidermal growth factor 96.6 0.00097 3.3E-08 51.8 2.5 31 124-154 11-45 (53)
70 2e26_A Reelin, reeler protein; 96.4 0.0011 3.8E-08 77.2 2.9 42 111-154 524-566 (725)
71 1z6c_A Vitamin K-dependent pro 96.3 0.0027 9.1E-08 54.5 3.9 59 236-309 13-79 (87)
72 2k2s_B Micronemal protein 6; m 96.3 0.0011 3.9E-08 53.0 1.2 34 121-154 12-51 (61)
73 1edm_B Factor IX; epidermal gr 96.2 0.0029 9.9E-08 45.6 2.9 28 281-308 8-39 (39)
74 3ca7_A Protein spitz; argos, E 96.1 0.0019 6.4E-08 49.9 1.5 30 125-154 14-49 (52)
75 3p5b_L Low density lipoprotein 96.0 0.0046 1.6E-07 68.4 4.8 62 122-197 2-71 (400)
76 1z6c_A Vitamin K-dependent pro 96.0 0.0023 7.9E-08 54.9 1.8 62 121-199 4-76 (87)
77 1a3p_A Epidermal growth factor 96.0 0.0036 1.2E-07 46.7 2.6 28 283-310 10-43 (45)
78 2w2n_E LDL receptor, low-densi 95.9 0.0024 8.3E-08 57.2 1.9 63 119-197 28-100 (107)
79 1lmj_A Fibrillin 1; EGF, calci 95.9 0.0019 6.4E-08 55.4 0.9 63 121-197 4-79 (86)
80 2w2n_E LDL receptor, low-densi 95.9 0.0019 6.6E-08 57.8 1.0 44 257-305 49-101 (107)
81 1nql_B Epidermal growth factor 95.8 0.0023 8E-08 49.6 1.2 31 280-310 10-46 (53)
82 1n7d_A LDL receptor, low-densi 95.7 0.033 1.1E-06 66.1 11.2 43 257-304 314-365 (699)
83 2fd6_A Urokinase-type plasmino 95.7 0.0081 2.8E-07 55.1 4.4 35 126-160 2-41 (122)
84 1lmj_A Fibrillin 1; EGF, calci 95.7 0.0026 8.9E-08 54.4 0.9 45 257-305 24-80 (86)
85 3ltf_D Protein spitz; receptor 95.6 0.0047 1.6E-07 48.9 2.3 29 126-154 15-49 (58)
86 1egf_A Epidermal growth factor 95.5 0.01 3.5E-07 45.9 3.6 37 234-280 12-50 (53)
87 1k36_A Epiregulin; EGF-like fo 95.4 0.0064 2.2E-07 45.7 2.2 27 282-309 12-44 (46)
88 1hae_A Heregulin-alpha; growth 95.2 0.0075 2.6E-07 48.4 2.2 30 281-310 11-49 (63)
89 2ddu_A Reelin; beta-jelly-roll 95.2 0.0034 1.2E-07 68.1 -0.1 31 121-153 192-224 (387)
90 2ddu_A Reelin; beta-jelly-roll 95.1 0.0039 1.3E-07 67.6 0.2 33 278-310 192-226 (387)
91 2bfw_A GLGA glycogen synthase; 95.0 0.052 1.8E-06 52.8 8.1 88 629-720 107-198 (200)
92 4aqt_A Laminin subunit gamma-1 94.8 0.011 3.7E-07 64.7 2.7 16 185-200 271-286 (375)
93 2fd6_A Urokinase-type plasmino 94.7 0.013 4.5E-07 53.7 2.6 61 235-308 2-63 (122)
94 3v65_B Low-density lipoprotein 94.4 0.0085 2.9E-07 65.8 0.7 61 121-195 4-73 (386)
95 3m0c_C LDL receptor, low-densi 94.4 0.038 1.3E-06 66.5 6.2 43 257-304 332-383 (791)
96 3ltf_D Protein spitz; receptor 94.1 0.016 5.4E-07 45.8 1.5 28 283-310 15-50 (58)
97 1g1s_A P-selectin; selectin, l 94.1 0.016 5.3E-07 55.4 1.7 53 97-154 100-156 (162)
98 2gek_A Phosphatidylinositol ma 94.0 0.055 1.9E-06 58.6 6.0 93 629-724 274-370 (406)
99 1q4g_A Prostaglandin G/H synth 93.9 0.025 8.5E-07 65.1 3.1 34 121-154 3-41 (553)
100 3p5b_L Low density lipoprotein 93.8 0.022 7.5E-07 62.8 2.4 44 257-305 20-72 (400)
101 2jjm_A Glycosyl transferase, g 93.6 0.18 6.1E-06 54.6 9.4 94 628-724 275-372 (394)
102 3okp_A GDP-mannose-dependent a 93.5 0.17 6E-06 54.2 8.8 92 629-724 264-366 (394)
103 3nt1_A Prostaglandin-endoperox 93.3 0.032 1.1E-06 64.3 2.7 34 121-154 2-40 (587)
104 2rnl_A Amphiregulin; AR, color 93.2 0.071 2.4E-06 40.7 3.6 28 125-153 18-49 (50)
105 2k2s_B Micronemal protein 6; m 92.9 0.033 1.1E-06 44.4 1.5 30 281-310 16-52 (61)
106 3c48_A Predicted glycosyltrans 92.7 0.2 6.7E-06 54.9 8.0 93 629-724 317-412 (438)
107 1n7d_A LDL receptor, low-densi 92.7 0.36 1.2E-05 57.1 10.8 13 257-270 353-365 (699)
108 1iox_A Betacellulin; EGF-like 92.4 0.056 1.9E-06 41.2 2.1 29 125-154 14-46 (50)
109 3v65_B Low-density lipoprotein 92.3 0.035 1.2E-06 60.8 1.2 47 257-308 23-83 (386)
110 2i9a_A Urokinase-type plasmino 92.2 0.084 2.9E-06 49.7 3.5 35 126-160 14-53 (145)
111 1q4g_A Prostaglandin G/H synth 91.8 0.057 1.9E-06 62.1 2.3 33 278-310 4-42 (553)
112 3cfw_A L-selectin; EGF, cell a 91.5 0.1 3.5E-06 49.7 3.3 53 97-154 100-156 (164)
113 2f9f_A First mannosyl transfer 91.4 0.12 4.2E-06 49.5 3.9 70 629-702 89-159 (177)
114 2iw1_A Lipopolysaccharide core 91.3 0.3 1E-05 51.9 7.2 94 628-724 261-358 (374)
115 1f0k_A MURG, UDP-N-acetylgluco 90.8 0.19 6.3E-06 53.6 4.9 90 629-723 246-343 (364)
116 3e50_C Protransforming growth 90.8 0.17 5.7E-06 38.6 3.2 29 125-154 14-46 (50)
117 1uzk_A Fibrillin-1; glycoprote 89.9 0.034 1.2E-06 53.2 -1.7 64 234-308 10-91 (162)
118 3nt1_A Prostaglandin-endoperox 89.8 0.11 3.9E-06 59.9 2.3 32 279-310 4-41 (587)
119 2nzw_A Alpha1,3-fucosyltransfe 89.7 1 3.5E-05 48.9 9.4 99 594-703 193-298 (371)
120 1g1t_A E-selectin; EGF, adhesi 89.4 0.11 3.6E-06 49.1 1.3 52 98-154 101-156 (157)
121 1g1s_A P-selectin; selectin, l 89.2 0.1 3.5E-06 49.6 1.1 28 282-309 125-156 (162)
122 3m0c_C LDL receptor, low-densi 89.0 0.21 7.1E-06 60.1 3.8 12 257-269 371-382 (791)
123 2i9a_A Urokinase-type plasmino 88.9 0.16 5.4E-06 47.8 2.1 61 235-308 14-75 (145)
124 1xdt_R Hbegf, heparin-binding 88.8 0.16 5.6E-06 42.4 1.9 28 125-153 46-77 (79)
125 1iox_A Betacellulin; EGF-like 88.8 0.14 4.6E-06 39.1 1.3 28 282-310 14-47 (50)
126 3cfw_A L-selectin; EGF, cell a 87.9 0.22 7.5E-06 47.3 2.5 29 282-310 125-157 (164)
127 3fro_A GLGA glycogen synthase; 87.4 0.49 1.7E-05 51.4 5.2 94 627-724 320-417 (439)
128 3t3p_B Integrin beta-3; integr 87.2 0.25 8.5E-06 55.2 2.7 26 282-307 446-472 (472)
129 2w86_A Fibrillin-1, fibrillin1 87.1 0.067 2.3E-06 50.3 -1.7 29 233-272 9-37 (147)
130 3rhz_A GTF3, nucleotide sugar 86.2 0.93 3.2E-05 48.7 6.5 92 628-724 224-323 (339)
131 3e50_C Protransforming growth 86.0 0.34 1.2E-05 36.9 2.1 27 282-309 14-46 (50)
132 2rnl_A Amphiregulin; AR, color 86.0 0.36 1.2E-05 36.7 2.2 26 282-308 18-49 (50)
133 3t3p_B Integrin beta-3; integr 85.1 0.39 1.3E-05 53.6 2.8 25 126-152 447-472 (472)
134 3oy2_A Glycosyltransferase B73 85.0 0.69 2.4E-05 50.1 4.9 93 628-724 264-377 (413)
135 2r60_A Glycosyl transferase, g 84.3 0.97 3.3E-05 50.5 5.8 94 628-724 345-446 (499)
136 2x6q_A Trehalose-synthase TRET 84.2 1.6 5.4E-05 47.3 7.3 91 629-724 307-401 (416)
137 3asi_A Neurexin-1-alpha; beta- 83.7 0.55 1.9E-05 51.7 3.4 34 121-154 186-223 (410)
138 1xdt_R Hbegf, heparin-binding 83.6 0.45 1.5E-05 39.7 1.9 27 282-309 46-78 (79)
139 3g5c_A ADAM 22; alpha/beta fol 83.5 0.44 1.5E-05 54.1 2.4 33 121-154 445-482 (510)
140 1g1t_A E-selectin; EGF, adhesi 82.9 0.3 1E-05 45.9 0.6 28 282-309 125-156 (157)
141 2y38_A Laminin subunit alpha-5 81.8 0.84 2.9E-05 50.1 3.8 59 95-153 292-373 (403)
142 3v4v_B Integrin beta-7; cell a 81.2 0.34 1.2E-05 54.3 0.4 29 282-310 467-496 (503)
143 3g5c_A ADAM 22; alpha/beta fol 80.8 0.51 1.8E-05 53.5 1.7 30 282-311 454-484 (510)
144 2qzs_A Glycogen synthase; glyc 80.1 2.6 8.7E-05 46.7 7.2 90 629-723 358-462 (485)
145 2iuy_A Avigt4, glycosyltransfe 80.0 1.8 6E-05 45.6 5.5 72 629-704 223-307 (342)
146 1rzu_A Glycogen synthase 1; gl 78.3 2.9 0.0001 46.3 6.9 90 629-723 357-461 (485)
147 3v4v_B Integrin beta-7; cell a 77.3 0.48 1.6E-05 53.2 0.0 26 126-153 468-494 (503)
148 3asi_A Neurexin-1-alpha; beta- 74.5 1.5 5.2E-05 48.1 3.2 29 281-309 190-223 (410)
149 2x0d_A WSAF; GT4 family, trans 72.6 1.9 6.7E-05 47.3 3.4 71 628-702 305-376 (413)
150 1gl4_A Nidogen-1, entactin; im 71.2 1.3 4.3E-05 46.2 1.4 33 120-152 5-44 (285)
151 3qcw_A Neurexin-1-alpha; synap 70.0 2.5 8.5E-05 53.4 3.9 34 121-154 1018-1055(1245)
152 1uqt_A Alpha, alpha-trehalose- 69.9 8.1 0.00028 43.4 7.8 91 628-723 342-440 (482)
153 3fl7_A Ephrin receptor; ATP-bi 67.4 1.8 6E-05 49.6 1.6 63 126-195 251-319 (536)
154 1ob1_C Major merozoite surface 63.3 5.8 0.0002 34.4 3.7 66 234-308 10-94 (99)
155 3s28_A Sucrose synthase 1; gly 62.5 8.9 0.0003 46.0 6.5 92 630-724 656-756 (816)
156 1vgv_A UDP-N-acetylglucosamine 59.3 1.5 5.3E-05 46.7 -0.8 78 629-714 274-353 (384)
157 2vsy_A XCC0866; transferase, g 59.0 14 0.00047 41.7 7.1 82 629-723 445-545 (568)
158 1n1i_A Merozoite surface prote 58.2 6.9 0.00024 34.2 3.3 66 234-310 16-97 (105)
159 1ob1_C Major merozoite surface 57.3 11 0.00037 32.7 4.3 41 121-161 5-51 (99)
160 3qcw_A Neurexin-1-alpha; synap 57.3 4.8 0.00016 50.8 3.1 33 121-153 620-656 (1245)
161 3beo_A UDP-N-acetylglucosamine 55.2 2.6 8.8E-05 44.7 0.1 77 629-713 274-352 (375)
162 3s2u_A UDP-N-acetylglucosamine 53.3 77 0.0026 33.5 11.6 82 629-717 244-338 (365)
163 3fl7_A Ephrin receptor; ATP-bi 52.4 5.6 0.00019 45.4 2.3 44 257-306 262-323 (536)
164 1apq_A Complement protease C1R 52.3 8.7 0.0003 28.7 2.7 23 125-149 20-44 (53)
165 2jkh_L Factor X light chain; p 51.8 7 0.00024 29.9 2.1 27 126-154 10-42 (55)
166 3nb0_A Glycogen [starch] synth 49.4 18 0.00061 42.4 5.9 95 629-725 510-621 (725)
167 2kl7_A Fibulin-4; secreted, ca 48.7 7.3 0.00025 31.6 1.8 28 121-148 4-37 (71)
168 2o6l_A UDP-glucuronosyltransfe 46.4 79 0.0027 29.0 9.1 84 632-721 79-168 (170)
169 1n1i_A Merozoite surface prote 43.4 19 0.00063 31.6 3.6 34 120-153 10-49 (105)
170 1zlg_A Anosmin 1; insulin-like 42.6 18 0.00062 42.2 4.7 25 125-151 52-76 (680)
171 1cmr_A Charybdotoxin, alpha ch 39.5 16 0.00055 24.7 2.0 22 120-143 4-30 (31)
172 2ktc_A Potassium channel toxin 39.2 8.7 0.0003 25.9 0.7 24 121-146 6-32 (34)
173 1pvz_A K+ toxin-like peptide; 38.6 4.7 0.00016 27.4 -0.7 18 280-297 13-30 (31)
174 1jlz_A Tityustoxin alpha-KTX; 36.8 7.9 0.00027 25.1 0.2 22 121-144 3-24 (26)
175 3t5o_A Complement component C6 32.9 22 0.00074 43.3 3.3 33 122-155 501-535 (913)
176 1gl4_A Nidogen-1, entactin; im 32.1 14 0.0005 38.3 1.3 26 282-307 13-44 (285)
177 1wz5_A Potassium channel block 31.5 14 0.00047 25.8 0.7 25 119-145 6-35 (35)
178 3otg_A CALG1; calicheamicin, T 31.2 1.3E+02 0.0043 31.8 8.8 87 630-720 301-393 (412)
179 1szb_A Mannose binding lectin- 31.0 11 0.00039 35.5 0.3 35 265-302 113-157 (170)
180 1kig_L Factor XA; glycoprotein 30.5 13 0.00045 27.9 0.5 24 132-155 11-40 (51)
181 1zlg_A Anosmin 1; insulin-like 29.6 32 0.0011 40.1 3.9 33 279-312 123-155 (680)
182 2hy7_A Glucuronosyltransferase 27.3 49 0.0017 35.7 4.6 63 629-700 276-347 (406)
183 1szb_A Mannose binding lectin- 27.2 27 0.00093 32.8 2.3 24 127-152 137-166 (170)
184 3tbd_A Netrin-G2, laminet-2; l 27.1 31 0.0011 36.7 2.8 28 126-153 271-301 (338)
185 2lix_A IMKTX104, potassium cha 30.6 16 0.00053 22.9 0.0 11 287-297 16-26 (27)
186 3ojy_A Complement component C8 21.3 71 0.0024 36.4 4.6 38 122-160 468-507 (554)
187 1bah_A Charybdotoxin, chabii; 20.8 22 0.00076 25.1 0.2 23 119-143 9-36 (37)
188 1nzi_A Complement C1S componen 20.2 55 0.0019 30.1 2.9 25 126-152 127-157 (159)
No 1
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.72 E-value=4.2e-18 Score=184.64 Aligned_cols=160 Identities=26% Similarity=0.561 Sum_probs=65.9
Q ss_pred cccCCCCCCCCCCCCEEecCCCeeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCC-CCeeeeCCCcc
Q 003853 117 MIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTT-RAMCFCGEGTK 195 (791)
Q Consensus 117 ~~~~~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~-~g~C~C~~G~~ 195 (791)
.+....|++.|+++|+|+. .+.|.|++||+|++|+.. .|.. .|.+...|. .+.|.|++||+
T Consensus 145 ~C~~~~C~~~C~~~G~C~~-~~~C~C~~G~~G~~C~~~---~C~~--------------~C~~~G~C~~~~~C~C~~G~~ 206 (324)
T 2ygq_A 145 TCQQAECPGGCRNGGFCNE-RRICECPDGFHGPHCEKA---LCTP--------------RCMNGGLCVTPGFCICPPGFY 206 (324)
T ss_dssp EECCCCCSSCCCSSCEECT-TSCEECCTTEESSSSCEE---SSSS--------------CCCTTCEECSSCCEECCTTCB
T ss_pred cccCCCCCCCCCCCCEECC-CCeEECCCCCcCCCCCCC---CCCC--------------CCCCCCEEcCCCEEeCCCCcc
Confidence 3445789999999999985 789999999999999974 3432 344222222 57999999999
Q ss_pred cCCCCCCCcCCCcc-cCCCC---CCCCCCCCCcccCcCc-ccCCCCCCCccccCCcchhhcccccccCccccCCCCCCCc
Q 003853 196 YPNRPVAEACGFQV-NLPSQ---PGAPKSTDWAKADLDN-IFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQ 270 (791)
Q Consensus 196 G~~c~~~~~C~~~~-~~~~~---~~~~c~~gw~g~~c~~-~~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~ 270 (791)
|..|+.. .|.... ....| ..+.|.+||.|..|+. .....|.++|.|.. .++|.|. +||+|.
T Consensus 207 G~~C~~~-~C~~~C~~~G~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~------------~~~C~C~-~G~~G~ 272 (324)
T 2ygq_A 207 GVNCDKA-NCSTTCFNGGTCFYPGKCICPPGLEGEQCEISKCPQPCRNGGKCIG------------KSKCKCS-KGYQGD 272 (324)
T ss_dssp TTTTCBC-CCSSCCCSSCCBSCSSCBCCCTTCCTTTTC------------------------------------------
T ss_pred CCCcccC-cCCCCCCCCCeeCCCCeeeCCCCccCCCCCcCcCCCcCCCCCEECC------------CCEEECC-CCCcCC
Confidence 9998643 232111 01111 2456899999999973 22356778888853 4799999 999999
Q ss_pred ccccccccCcCCCCCCCceec-CCeeecCCCcccCCCCCccc
Q 003853 271 FCEVPVSSTCVNQCSGHGHCR-GGFCQCDSGWYGVDCSIPSV 311 (791)
Q Consensus 271 ~Ce~~~~~~C~~~Cs~~G~C~-~G~C~C~~G~~G~~C~~~~~ 311 (791)
.|+.. .|.++|+++|+|+ .+.|.|.+||+|.+|+....
T Consensus 273 ~C~~~---~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~~ 311 (324)
T 2ygq_A 273 LCSKP---VCEPGCGAHGTCHEPNKCQCQEGWHGRHCNKRYE 311 (324)
T ss_dssp ------------------------------------------
T ss_pred CCcCC---CCCCCCCCCCEECCCCEeECCCCCcCCCCCCCCc
Confidence 99965 6888999999998 78999999999999998753
No 2
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.56 E-value=5.7e-15 Score=173.69 Aligned_cols=156 Identities=21% Similarity=0.366 Sum_probs=105.6
Q ss_pred CCC-CCCEEecCCCeeeeCCCCcCCCCCccc-------cCCCCCCCCCCCCCCCcccccCCCCCCCCCCeeeeC----CC
Q 003853 126 DCS-GQGVCNHELGQCRCFHGFRGKGCSERI-------HFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCG----EG 193 (791)
Q Consensus 126 ~Cs-~~G~C~~~~G~C~C~~G~~G~~Ce~~~-------~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~----~G 193 (791)
.|+ ++|.|. .|.|.|++||+|..|+... ...|.... ....|.+.+.|..+.|.|. +|
T Consensus 447 ~C~~g~G~~~--~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~---------~~~~Cs~~G~C~~g~C~C~~~~~~G 515 (690)
T 3fcs_B 447 RCNNGNGTFE--CGVCRCGPGWLGSQCECSEEDYRPSQQDECSPRE---------GQPVCSQRGECLCGQCVCHSSDFGK 515 (690)
T ss_dssp TTTTTSEEEE--TTEEEECTTCCSSSSCCSCC------CCCCSSSS---------SSCGGGGSEEECSSSEEECCCSSCC
T ss_pred cccCCCCeEe--CCceEeCCCccCCceeeccCccCCccCCcCCCCC---------CCCCCCCCCEEECCeeEeecCCCCC
Confidence 577 678886 8999999999999998652 12243211 1235876666677999999 99
Q ss_pred cccCCCCCC-CcCCCc-----ccCCCC--CCCCCCCCCcccCcCc------ccC---CCCCCCccccCCcchhhcccccc
Q 003853 194 TKYPNRPVA-EACGFQ-----VNLPSQ--PGAPKSTDWAKADLDN------IFT---TNGSKPGWCNVDPEEAYALKVQF 256 (791)
Q Consensus 194 ~~G~~c~~~-~~C~~~-----~~~~~~--~~~~c~~gw~g~~c~~------~~~---~~C~~~G~C~~~~~~~~~~~~c~ 256 (791)
|+|..|+.. ..|... .....| ..|.|..||+|..|+. +.. ..|+++|.| .
T Consensus 516 y~G~~Ce~~~~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C-------------~ 582 (690)
T 3fcs_B 516 ITGKYCECDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKC-------------E 582 (690)
T ss_dssp CBSTTSCBCSSCCCBSSSSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEE-------------E
T ss_pred eeCCCcCcccCcCcCCCCCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEE-------------e
Confidence 999999632 234310 001111 2345788999988871 111 234444444 4
Q ss_pred cCcccc-CCCCCCCcccccccccCcCCCCCCCceecCCeeecCCCcccCCCCCcccc
Q 003853 257 KEECDC-KYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVM 312 (791)
Q Consensus 257 ~g~C~C-~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~~G~C~C~~G~~G~~C~~~~~~ 312 (791)
.++|.| . +||+|..|+.. ..|+++|.++|.|.. |..||+|..|+...+.
T Consensus 583 ~g~C~C~~-~Gy~G~~Ce~C--~~C~~~C~~~g~Cv~----C~~g~tG~~C~~~~C~ 632 (690)
T 3fcs_B 583 CGSCVCIQ-PGSYGDTCEKC--PTCPDACTFKKECVE----CKKFDRGALHDENTCN 632 (690)
T ss_dssp TTEEECCS-TTCBSTTSCBC--TTSCCTTTSCCGGGT----TTTTCCSSSSSSSCST
T ss_pred CCEEECCC-CCccCCCcCcC--CCCCCCCCCCCCccc----CCCCCccCCCCccccc
Confidence 678999 8 89999999862 257888999998887 8899999988776554
No 3
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.54 E-value=1.9e-15 Score=177.22 Aligned_cols=136 Identities=29% Similarity=0.595 Sum_probs=94.8
Q ss_pred CCCCCCCEEecCCCeeeeCCCCcCCCCCcccc--------CCCCCCCCCCCCCCCcccccCCCCCCCCCCeeeeC-----
Q 003853 125 SDCSGQGVCNHELGQCRCFHGFRGKGCSERIH--------FQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCG----- 191 (791)
Q Consensus 125 ~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~--------~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~----- 191 (791)
..|+++|+|. .|.|.|++||+|..|+.... ..|... -....|.+.+.|..|.|.|.
T Consensus 435 ~~Cs~~G~C~--~g~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~---------~~~~~Cs~~G~C~~G~C~C~~~~~~ 503 (687)
T 3k6s_B 435 SLCHGKGFLE--CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKD---------NNSIICSGLGDCVCGQCLCHTSDVP 503 (687)
T ss_dssp STGGGSEEES--SSSEEECSSEESTTSCEESSSCCCSGGGSTTSSS---------TTSCGGGSSEEEETTEEEECCCCST
T ss_pred CCCCCCCEEe--CCEeEcCCCCcCCcccccCCcCCccccCCCCCCC---------CCCCcCCCCCEEeCCEEEcCCCCCC
Confidence 4799999998 89999999999999995321 123321 11235776666668899999
Q ss_pred -CCcccCCCCCC-CcCCCcccCCCCCCCCCCCCCcccCcCcccCCCCCC--CccccCCcchhhcccccccCccccCCCCC
Q 003853 192 -EGTKYPNRPVA-EACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSK--PGWCNVDPEEAYALKVQFKEECDCKYDGL 267 (791)
Q Consensus 192 -~G~~G~~c~~~-~~C~~~~~~~~~~~~~c~~gw~g~~c~~~~~~~C~~--~G~C~~~~~~~~~~~~c~~g~C~C~~~G~ 267 (791)
+||+|..|+.. ..|.. .....|++ +|.|. .++|.|. +||
T Consensus 504 ~~G~~G~~Ce~~~~~C~~-----------------------~~~~~C~~~~~G~C~-------------~g~C~C~-~G~ 546 (687)
T 3k6s_B 504 GKLIYGQYCECDTINCER-----------------------YNGQVCGGPGRGLCF-------------CGKCRCH-PGF 546 (687)
T ss_dssp TCCEESTTSCEESSCSCE-----------------------ETTEETSHHHHEEEE-------------TTEEEEC-TTC
T ss_pred CCCccccccccccccccC-----------------------CCCcCcCCCCCCeEE-------------CCEEEcC-CCC
Confidence 99999888521 11210 00223555 56664 5688888 888
Q ss_pred CCccccccc-ccCcCC----CCCCCceecCCeeecCCCcccCCCCC
Q 003853 268 LGQFCEVPV-SSTCVN----QCSGHGHCRGGFCQCDSGWYGVDCSI 308 (791)
Q Consensus 268 ~G~~Ce~~~-~~~C~~----~Cs~~G~C~~G~C~C~~G~~G~~C~~ 308 (791)
+|..|+... ...|.. .|+++|+|+.|.|.|.+||+|..|++
T Consensus 547 ~G~~Cec~~~~~~C~~~~g~~Cs~~G~C~~g~C~C~~Gy~G~~Ce~ 592 (687)
T 3k6s_B 547 EGSACQCERTTEGCLNPRRVECSGRGRCRCNVCECHSGYQLPLCQE 592 (687)
T ss_dssp CSTTSCSCCSSCTTBCTTCSBTSSSCCBCSSCBCCSTTCCTTTTCC
T ss_pred cCCCCccCCCCCCCCCCCCCCCCCCCcCCCCEEECCCCCcCCCCCC
Confidence 888888432 235654 58888888888888888888888887
No 4
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=99.43 E-value=5.9e-14 Score=138.03 Aligned_cols=142 Identities=27% Similarity=0.586 Sum_probs=96.4
Q ss_pred ceeeccCCCcccccccCcccCCCCC--CCCCCCCEEecCCCeeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccC
Q 003853 100 RWLSGCDSVAKEVDLVEMIGGKSCK--SDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSIC 177 (791)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~~C~--~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C 177 (791)
.....|..+..+..+. ..|. .+|+++|+|+. +|+|.|++||+|..|+.. .|.. .|
T Consensus 16 ~~~c~C~~g~~G~~C~-----~~C~~~~~c~~~g~C~~-~g~C~C~~G~~G~~C~~~---~C~~--------------~C 72 (169)
T 2vj2_A 16 RSAVTCDDYYYGFGCN-----KFCRPRDDFFGHYACDQ-NGNKTCMEGWMGPECNRA---ICRQ--------------GC 72 (169)
T ss_dssp -----CCTTEETTTTC-----EECCCEEETTEEEEECS-SCCEEECTTEESTTSCEE---CCCT--------------TC
T ss_pred CeeeeCCCcCcCCCcc-----cccCCCCCcCCCCEeCC-CCeeECCCCCcCCCCCCC---CCCC--------------CC
Confidence 3344455444433332 2453 36999999985 899999999999999975 3442 12
Q ss_pred C---CCCCCCCCeeeeCCCcccCCCCCCCcCCCcccCCCCCCCCCCCCCcccCcCcccCCCCCCCccccCCcchhhcccc
Q 003853 178 P---THCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKV 254 (791)
Q Consensus 178 ~---g~C~~~~g~C~C~~G~~G~~c~~~~~C~~~~~~~~~~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~~~ 254 (791)
. +.|.. .+.|.|.+||+|..|+. |. . ...|. +|.|..
T Consensus 73 ~~~~g~C~~-~~~C~C~~G~~G~~C~~---C~---~----------------------~~~C~-~g~C~~---------- 112 (169)
T 2vj2_A 73 SPKHGSCKL-PGDCRCQYGWQGLYCDK---CI---P----------------------HPGCV-HGICNE---------- 112 (169)
T ss_dssp CTTTEECSS-TTCCEECTTEESSSSCE---EC---C----------------------CTTCS-SEECSS----------
T ss_pred CCCCcccCC-CCeeECCCCCCCCCccc---CC---C----------------------CCCCC-CCCcCC----------
Confidence 2 23332 57899999999877632 21 0 11244 357752
Q ss_pred cccCccccCCCCCCCcccccccccCcC--CCCCCCceecC-----CeeecCCCcccCCCCC
Q 003853 255 QFKEECDCKYDGLLGQFCEVPVSSTCV--NQCSGHGHCRG-----GFCQCDSGWYGVDCSI 308 (791)
Q Consensus 255 c~~g~C~C~~~G~~G~~Ce~~~~~~C~--~~Cs~~G~C~~-----G~C~C~~G~~G~~C~~ 308 (791)
.++|.|. +||+|..|+..+ ..|. ++|.++|+|+. +.|.|++||+|.+|++
T Consensus 113 --~~~C~C~-~G~~G~~C~~~~-~~C~~~~~C~~~g~C~~~~~~~~~C~C~~G~~G~~Ce~ 169 (169)
T 2vj2_A 113 --PWQCLCE-TNWGGQLCDKDL-NYCGTHQPCLNGGTCSNTGPDKYQCSCPEGYSGPNCEI 169 (169)
T ss_dssp --TTCCEEC-TTEETTTTCEES-CHHHHTCCCCTTCEEEECSTTCEEEECCTTCCSTTSCC
T ss_pred --CCEEeCC-CCCCCCcccCCC-CCCCCCCCCCCCCEEcCCCCCCcEeECCCCCcCcCcCC
Confidence 5799998 999999998653 3443 78999999973 6999999999999985
No 5
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.36 E-value=4.9e-13 Score=149.84 Aligned_cols=153 Identities=21% Similarity=0.381 Sum_probs=101.8
Q ss_pred cCCCCC---CCCCCCCEEecCCCeeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcc-cccCC--CCCCCCCCeeeeCC
Q 003853 119 GGKSCK---SDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWV-VSICP--THCDTTRAMCFCGE 192 (791)
Q Consensus 119 ~~~~C~---~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~-~~~C~--g~C~~~~g~C~C~~ 192 (791)
.+..|. .+|+++|+|+..+|+|.|++||+|.+|+.. |........+...|. ...|. +.|+...++|.|.+
T Consensus 194 ~G~~C~~~C~~C~~~G~C~~~~g~C~C~~G~~G~~Ce~~----C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~ 269 (423)
T 2gy5_A 194 WGPECNHLCTACMNNGVCHEDTGECICPPGFMGRTCEKA----CELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCAT 269 (423)
T ss_dssp ESTTSCEECCCCCTTCEECTTTCCEECCTTEESTTSCEE----CCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCB
T ss_pred CCCCCCCCCCCCCCCCEEECCCCcEeCCCCccCCCcccc----cCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCC
Confidence 345553 279999999977899999999999999974 322100000000000 01232 23444578999999
Q ss_pred CcccCCCCCCCcCCCcccCCCCCCCCCCCCCcccCcCcccCCCCCCCccccCCcchhhcccccccCccccCCCCCCCccc
Q 003853 193 GTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFC 272 (791)
Q Consensus 193 G~~G~~c~~~~~C~~~~~~~~~~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~C 272 (791)
||+|..|+. .|.+||.|..|+. ...|.++|.|... ..|.|. +||+|..|
T Consensus 270 G~~G~~C~~----------------~C~~G~~G~~C~~--~C~C~ngg~C~~~------------~~C~C~-~G~~G~~C 318 (423)
T 2gy5_A 270 GWKGLQCNE----------------ACHPGFYGPDCKL--RCSCNNGEMCDRF------------QGCLCS-PGWQGLQC 318 (423)
T ss_dssp TCBSGGGCB----------------CCCTTBCSBTTCC--BCCCTTCCEEETT------------TEEECC-TTCBSTTS
T ss_pred CcccccccC----------------ccCCCCcCCcccc--cccCCCCCEecCC------------CceECC-CCCcCCCC
Confidence 999877742 2678999998874 2368899999642 349999 99999999
Q ss_pred ccccccCcCCCCCCCcee-cCCeeecCCCcccCCCCCccc
Q 003853 273 EVPVSSTCVNQCSGHGHC-RGGFCQCDSGWYGVDCSIPSV 311 (791)
Q Consensus 273 e~~~~~~C~~~Cs~~G~C-~~G~C~C~~G~~G~~C~~~~~ 311 (791)
+... ++ ......+ ..+.|.|.+||+|..|+...+
T Consensus 319 e~~~---~~--~~~~~~~~~~~~~~c~~g~~g~~C~~~~~ 353 (423)
T 2gy5_A 319 EREG---IP--RMTPKIVDLPDHIEVNSGKFNPICKASGW 353 (423)
T ss_dssp CBCS---SC--CCCCEECSCCSBCCEESEEECCEEEEECT
T ss_pred ccCc---cC--CcCcceecCCCeEEeCCCccCCcccccCC
Confidence 9752 11 1111112 256899999999999886544
No 6
>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*
Probab=99.34 E-value=6e-13 Score=156.10 Aligned_cols=132 Identities=24% Similarity=0.461 Sum_probs=92.3
Q ss_pred CCCCCCEEecCCCeeeeC------CCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCC--CCCCCCCeeeeCCCcccC
Q 003853 126 DCSGQGVCNHELGQCRCF------HGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPT--HCDTTRAMCFCGEGTKYP 197 (791)
Q Consensus 126 ~Cs~~G~C~~~~G~C~C~------~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g--~C~~~~g~C~C~~G~~G~ 197 (791)
.|+|+|+|+ .|+|.|+ +||+|..|+.. ...|... .+..|.+ .+.|..|.|.|.+||+|.
T Consensus 483 ~Cs~~G~C~--~G~C~C~~~~~~~~G~~G~~Ce~~-~~~C~~~----------~~~~C~~~~~G~C~~g~C~C~~G~~G~ 549 (687)
T 3k6s_B 483 ICSGLGDCV--CGQCLCHTSDVPGKLIYGQYCECD-TINCERY----------NGQVCGGPGRGLCFCGKCRCHPGFEGS 549 (687)
T ss_dssp GGGSSEEEE--TTEEEECCCCSTTCCEESTTSCEE-SSCSCEE----------TTEETSHHHHEEEETTEEEECTTCCST
T ss_pred cCCCCCEEe--CCEEEcCCCCCCCCCccccccccc-cccccCC----------CCcCcCCCCCCeEECCEEEcCCCCcCC
Confidence 399999999 7999999 99999999953 2345531 1135765 555556899999999998
Q ss_pred CCCCCCcCCCcccCCCCCCCCCCCCCcccCcCcccCCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccc
Q 003853 198 NRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVS 277 (791)
Q Consensus 198 ~c~~~~~C~~~~~~~~~~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~ 277 (791)
.|+... ....| .......|+++|.|. .++|.|. +||+|..|+..
T Consensus 550 ~Cec~~------~~~~C--------------~~~~g~~Cs~~G~C~-------------~g~C~C~-~Gy~G~~Ce~c-- 593 (687)
T 3k6s_B 550 ACQCER------TTEGC--------------LNPRRVECSGRGRCR-------------CNVCECH-SGYQLPLCQEC-- 593 (687)
T ss_dssp TSCSCC------SSCTT--------------BCTTCSBTSSSCCBC-------------SSCBCCS-TTCCTTTTCCC--
T ss_pred CCccCC------CCCCC--------------CCCCCCCCCCCCcCC-------------CCEEECC-CCCcCCCCCCC--
Confidence 885210 00011 101134577888885 5789998 99999999974
Q ss_pred cCcCCCCCCCceecCCeeec-CCCcccCCCCC
Q 003853 278 STCVNQCSGHGHCRGGFCQC-DSGWYGVDCSI 308 (791)
Q Consensus 278 ~~C~~~Cs~~G~C~~G~C~C-~~G~~G~~C~~ 308 (791)
..|+++|.++|.|+ .|.| ..|..|..|+.
T Consensus 594 ~~C~~~C~~~g~Cv--~C~~~~~G~~~~~C~~ 623 (687)
T 3k6s_B 594 PGCPSPCGKYISCA--ECLKFEKGPFGKNCSA 623 (687)
T ss_dssp TTSCCCCTTTHHHH--TTTTSCSCCCSSCSSS
T ss_pred CCCCcccCCCCCCC--cccCCCCCCCCccccc
Confidence 26889999999998 3444 33444555654
No 7
>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*
Probab=99.29 E-value=2.2e-12 Score=144.62 Aligned_cols=127 Identities=20% Similarity=0.391 Sum_probs=88.9
Q ss_pred eeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCCCCeeeeCCCcccCCCCCCCcCCCcccCCCCCCCC
Q 003853 139 QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAP 218 (791)
Q Consensus 139 ~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~G~~c~~~~~C~~~~~~~~~~~~~ 218 (791)
.|.|++||.|+.|+.. ..+|.++ |.|+...+.|.|++||+|..|+..
T Consensus 186 ~c~C~~g~~G~~C~~~-C~~C~~~----------------G~C~~~~g~C~C~~G~~G~~Ce~~---------------- 232 (423)
T 2gy5_A 186 VRRCEAQKWGPECNHL-CTACMNN----------------GVCHEDTGECICPPGFMGRTCEKA---------------- 232 (423)
T ss_dssp ECSSCTTEESTTSCEE-CCCCCTT----------------CEECTTTCCEECCTTEESTTSCEE----------------
T ss_pred CCcCCCCCCCCCCCCC-CCCCCCC----------------CEEECCCCcEeCCCCccCCCcccc----------------
Confidence 5899999999999974 2234332 445556789999999999888431
Q ss_pred CCCCCcccCcCccc--CCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccc-c----ccCcCC--CCCCCce
Q 003853 219 KSTDWAKADLDNIF--TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVP-V----SSTCVN--QCSGHGH 289 (791)
Q Consensus 219 c~~gw~g~~c~~~~--~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~-~----~~~C~~--~Cs~~G~ 289 (791)
|..++.|..|.+.. ...|.++|.|... .++|.|. +||+|..|+.. . ...|.. +|.++|+
T Consensus 233 C~~g~~g~~C~~~C~~~~~C~~~g~C~~~-----------~~~C~C~-~G~~G~~C~~~C~~G~~G~~C~~~C~C~ngg~ 300 (423)
T 2gy5_A 233 CELHTFGRTCKERCSGQEGCKSYVFCLPD-----------PYGCSCA-TGWKGLQCNEACHPGFYGPDCKLRCSCNNGEM 300 (423)
T ss_dssp CCTTEESTTSCEECCSTTTTTTCCEEETT-----------TTEEECC-BTCBSGGGCBCCCTTBCSBTTCCBCCCTTCCE
T ss_pred cCCCCCCCCcCccCCCCCCCCCCCEECCC-----------CCeEEeC-CCcccccccCccCCCCcCCcccccccCCCCCE
Confidence 33455565565211 2346666666432 6799998 99999999862 1 112322 6899999
Q ss_pred ec-CCeeecCCCcccCCCCCcc
Q 003853 290 CR-GGFCQCDSGWYGVDCSIPS 310 (791)
Q Consensus 290 C~-~G~C~C~~G~~G~~C~~~~ 310 (791)
|+ ...|.|++||+|.+|+...
T Consensus 301 C~~~~~C~C~~G~~G~~Ce~~~ 322 (423)
T 2gy5_A 301 CDRFQGCLCSPGWQGLQCEREG 322 (423)
T ss_dssp EETTTEEECCTTCBSTTSCBCS
T ss_pred ecCCCceECCCCCcCCCCccCc
Confidence 97 3459999999999999864
No 8
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=99.28 E-value=1.7e-12 Score=132.09 Aligned_cols=62 Identities=32% Similarity=0.755 Sum_probs=51.3
Q ss_pred CCCCCCccccCCcchhhcccccccCccccCCCC------CCCcccccccccCcCC----CCCCC--ceecCCeeecCCCc
Q 003853 234 TNGSKPGWCNVDPEEAYALKVQFKEECDCKYDG------LLGQFCEVPVSSTCVN----QCSGH--GHCRGGFCQCDSGW 301 (791)
Q Consensus 234 ~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G------~~G~~Ce~~~~~~C~~----~Cs~~--G~C~~G~C~C~~G~ 301 (791)
..|+++|.|. .++|.|. +| |+|.+|+.. ...|+. .|+++ |+|+.|.|.|.+||
T Consensus 143 ~~Csg~G~C~-------------~g~C~C~-~gw~~~~~~~G~~Ce~~-~~~C~~~~g~~C~~~~~G~C~~g~C~C~~G~ 207 (217)
T 2p28_B 143 IICSGLGDCV-------------CGQCLCH-TSDVPGKLIYGQYCECD-TINCERYNGQVCGGPGRGLCFCGKCRCHPGF 207 (217)
T ss_dssp CBGGGTEEEE-------------TTEEEEC-CCCSTTCCEESTTSCEE-SSCSCEETTEETTCTTTEEEETTEEEECTTE
T ss_pred CCCCCCCEEe-------------CCceECC-CCCCCcccEECCCcccC-CccCCCCCCCCCCCCCCcEEeCCeeECCCCC
Confidence 4577788885 5789998 99 699999964 235765 49998 99999999999999
Q ss_pred ccCCCCCcc
Q 003853 302 YGVDCSIPS 310 (791)
Q Consensus 302 ~G~~C~~~~ 310 (791)
+|.+|+.+.
T Consensus 208 ~G~~C~~~~ 216 (217)
T 2p28_B 208 EGSACQHHH 216 (217)
T ss_dssp ESTTSCEEC
T ss_pred ccCCcCCCC
Confidence 999999764
No 9
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=99.23 E-value=1.1e-11 Score=117.23 Aligned_cols=107 Identities=26% Similarity=0.668 Sum_probs=76.1
Q ss_pred CCCC---CCCCCCCEEecCCC--eeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCCCCeeeeCCCcc
Q 003853 121 KSCK---SDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTK 195 (791)
Q Consensus 121 ~~C~---~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~ 195 (791)
++|. ++|.++|+|+...| +|.|++||+|..|+.. ..+|.
T Consensus 6 deC~~~~~~C~~~g~C~~~~g~~~C~C~~Gy~G~~C~~~-~~~C~----------------------------------- 49 (135)
T 2vj3_A 6 DECSLGANPCEHAGKCINTLGSFECQCLQGYTGPRCEID-VNECV----------------------------------- 49 (135)
T ss_dssp CTTTSSSCSSSTTCEEEECSSSEEEECCTTEESTTSCEE-CCTTT-----------------------------------
T ss_pred ccccCCCCCCCCCCEeECCCCCEEEECCCCCcCCccccc-CccCC-----------------------------------
Confidence 6673 67999999987666 8999999999999853 11121
Q ss_pred cCCCCCCCcCCCcccCCCCCCCCCCCCCcccCcCcccCCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccc
Q 003853 196 YPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVP 275 (791)
Q Consensus 196 G~~c~~~~~C~~~~~~~~~~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~ 275 (791)
..+|.++|.|....+ .++|.|+ +||+|..|+..
T Consensus 50 -------------------------------------~~~C~~~~~C~~~~g---------~~~C~C~-~G~~G~~C~~~ 82 (135)
T 2vj3_A 50 -------------------------------------SNPCQNDATCLDQIG---------EFQCICM-PGYEGVHCEVN 82 (135)
T ss_dssp -------------------------------------TCCCCSSCEEEECSS---------CEEEECC-TTEESSSSCEE
T ss_pred -------------------------------------CCCCCCCCEEeCCCC---------CceeeCC-CCCcCCcceec
Confidence 123455566754321 4588898 89999988865
Q ss_pred cccCcCCCCCCCceec----CCeeecCCCcccCCCCCcc
Q 003853 276 VSSTCVNQCSGHGHCR----GGFCQCDSGWYGVDCSIPS 310 (791)
Q Consensus 276 ~~~~C~~~Cs~~G~C~----~G~C~C~~G~~G~~C~~~~ 310 (791)
++..-.++|.++|+|+ ...|.|++||+|..|++.+
T Consensus 83 ~~~C~~~~C~~~g~C~~~~g~~~C~C~~G~~G~~C~~~i 121 (135)
T 2vj3_A 83 TDECASSPCLHNGRCLDKINEFQCECPTGFTGHLCQVDL 121 (135)
T ss_dssp CCTTTTCCSTTTCEEEECSSCEEEECCTTEESSSSCEEC
T ss_pred CCcccCCCcCCCCEeECCCCCeEEECCCCCcCCccCccC
Confidence 4433356788888896 3489999999999887643
No 10
>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}
Probab=99.18 E-value=1.5e-11 Score=133.12 Aligned_cols=123 Identities=22% Similarity=0.526 Sum_probs=48.5
Q ss_pred CCCCCCCCCCCCEEecCCCeeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCC--CCCCCCCeeeeCCCcccC
Q 003853 120 GKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPT--HCDTTRAMCFCGEGTKYP 197 (791)
Q Consensus 120 ~~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g--~C~~~~g~C~C~~G~~G~ 197 (791)
...|.+.|+++|+|+. .+.|.|++||+|..|+.. .|.. .|.+ .|.. .+.|.|++||+|.
T Consensus 180 ~~~C~~~C~~~G~C~~-~~~C~C~~G~~G~~C~~~---~C~~--------------~C~~~G~C~~-~~~C~C~~G~~G~ 240 (324)
T 2ygq_A 180 KALCTPRCMNGGLCVT-PGFCICPPGFYGVNCDKA---NCST--------------TCFNGGTCFY-PGKCICPPGLEGE 240 (324)
T ss_dssp EESSSSCCCTTCEECS-SCCEECCTTCBTTTTCBC---CCSS--------------CCCSSCCBSC-SSCBCCCTTCCTT
T ss_pred CCCCCCCCCCCCEEcC-CCEEeCCCCccCCCcccC---cCCC--------------CCCCCCeeCC-CCeeeCCCCccCC
Confidence 3467778999999985 799999999999999974 2432 3543 3433 4799999999999
Q ss_pred CCCCCCcCCCcc-cCCCC---CCCCCCCCCcccCcCc-ccCCCCCCCccccCCcchhhcccccccCccccCCCCCCCccc
Q 003853 198 NRPVAEACGFQV-NLPSQ---PGAPKSTDWAKADLDN-IFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFC 272 (791)
Q Consensus 198 ~c~~~~~C~~~~-~~~~~---~~~~c~~gw~g~~c~~-~~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~C 272 (791)
.|+.. .|.... ....| ..+.|.+||.|..|+. .....|.++|.|.. .++|.|. +||+|..|
T Consensus 241 ~C~~~-~C~~~C~~~g~C~~~~~C~C~~G~~G~~C~~~~C~~~C~~~g~C~~------------~~~C~C~-~G~~G~~C 306 (324)
T 2ygq_A 241 QCEIS-KCPQPCRNGGKCIGKSKCKCSKGYQGDLCSKPVCEPGCGAHGTCHE------------PNKCQCQ-EGWHGRHC 306 (324)
T ss_dssp TTC-----------------------------------------------------------------------------
T ss_pred CCCcC-cCCCcCCCCCEECCCCEEECCCCCcCCCCcCCCCCCCCCCCCEECC------------CCEeECC-CCCcCCCC
Confidence 98642 232110 01111 2456899999999973 22356778888863 4799999 99999999
Q ss_pred ccc
Q 003853 273 EVP 275 (791)
Q Consensus 273 e~~ 275 (791)
+..
T Consensus 307 ~~~ 309 (324)
T 2ygq_A 307 NKR 309 (324)
T ss_dssp ---
T ss_pred CCC
Confidence 975
No 11
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=99.16 E-value=4.3e-11 Score=113.87 Aligned_cols=75 Identities=20% Similarity=0.488 Sum_probs=52.9
Q ss_pred CCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccccCcCCCCCCCceec--C--CeeecCCCcccCCCCC
Q 003853 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR--G--GFCQCDSGWYGVDCSI 308 (791)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~--~--G~C~C~~G~~G~~C~~ 308 (791)
..+|.++|.|...... ....-..+.|.|+ +||+|..|+..++..-.++|.++|+|+ . ..|.|++||+|..|+.
T Consensus 57 ~~~C~~~g~C~~~~~~--~~~~~~~~~C~C~-~G~~G~~C~~~i~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~c~~ 133 (143)
T 4d90_A 57 PNPCHNGGTCEISEAY--RGDTFIGYVCKCP-RGFNGIHCQHNINECEVEPCKNGGICTDLVANYSCECPGEFMGRNCQY 133 (143)
T ss_dssp SCCCCTTCEEEECCCE--ETTEECCEEEECC-TTEESTTSCEECCTTTTCCSCTTCEEEEETTEEEEECCTTCBSTTSCB
T ss_pred CCCCCCCCEecCCCcc--ccCCCCCeEeECc-CCCcCCCcccCCCcCCCCCCCCCCEeECCCCCeEeECCCCCccCCcee
Confidence 3457788888632100 0000114689999 999999998655444467899999997 2 3899999999999998
Q ss_pred cc
Q 003853 309 PS 310 (791)
Q Consensus 309 ~~ 310 (791)
..
T Consensus 134 ~~ 135 (143)
T 4d90_A 134 KG 135 (143)
T ss_dssp C-
T ss_pred cC
Confidence 65
No 12
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=99.10 E-value=8.9e-12 Score=124.29 Aligned_cols=141 Identities=21% Similarity=0.419 Sum_probs=97.7
Q ss_pred CCCCCCCCEEecCCC--eeeeCCCCcCC---CCCccccCCCCCCCCCCCCCCCcccccCC--CCCCCCC-------Ceee
Q 003853 124 KSDCSGQGVCNHELG--QCRCFHGFRGK---GCSERIHFQCNFPKTPELPYGRWVVSICP--THCDTTR-------AMCF 189 (791)
Q Consensus 124 ~~~Cs~~G~C~~~~G--~C~C~~G~~G~---~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--g~C~~~~-------g~C~ 189 (791)
+++|. +|+|+...| +|.|++||+|. .|+. ..+|..... ...|. +.|.... ..|.
T Consensus 10 ~~pC~-ng~C~~~~g~~~C~C~~G~~g~~~~~C~~--id~C~~~~~---------~~~C~~~~~C~~~~~~~~~g~y~C~ 77 (186)
T 1z1y_A 10 DTICX-NGQLVQMSNHFXCMCNEGLVHLSENTCEE--XNECXXETL---------GXACGEFGQCIENPDPAQVNMYXCG 77 (186)
T ss_dssp TCCCB-TEEEEECSSCEEEEECTTEEEEETTEEEE--CCCCSGGGT---------TSEEETTEEEEECSSTTSSCSEEEE
T ss_pred CCCCC-CCEeECCCCCeEeECCCCCccCCCCccCC--CCcccCCCC---------CCCCCCCCEeecCCCCcCCCCEECC
Confidence 57787 569987655 79999999998 7874 356652100 12353 3454433 3899
Q ss_pred eCCCcccCCCCCCCcCCCcccCCCCCCCCCCCCCcccCcCcccCCCCCCCcccc----CCcchhhcccccccCccccCCC
Q 003853 190 CGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCN----VDPEEAYALKVQFKEECDCKYD 265 (791)
Q Consensus 190 C~~G~~G~~c~~~~~C~~~~~~~~~~~~~c~~gw~g~~c~~~~~~~C~~~G~C~----~~~~~~~~~~~c~~g~C~C~~~ 265 (791)
|++||+|..+ .|. . ..| ...+|.++|.|. ...+ .++|.|+ +
T Consensus 78 C~~G~~g~~~----~C~--~----------------d~C---~~~~C~~~g~C~~~~~~~~g---------~~~C~C~-~ 122 (186)
T 1z1y_A 78 CIEGYTLXED----TCV--L----------------DVC---QYXNCGESGECIVEYLSEIQ---------SAGCSCA-I 122 (186)
T ss_dssp ECTTEEEETT----EEE--E----------------GGG---TTCCCCTTEEEEEEEETTEE---------EEEEEEC-T
T ss_pred CCCCCccCCC----CCC--C----------------CcC---cCCCCCCCCEEeeCCcCCCC---------CceEECC-C
Confidence 9999998654 111 0 011 134588889996 3221 4699999 9
Q ss_pred CCCC-----cccccccccCcCCCC-CCCceec----CCeeecCCCcccCCCCCccc
Q 003853 266 GLLG-----QFCEVPVSSTCVNQC-SGHGHCR----GGFCQCDSGWYGVDCSIPSV 311 (791)
Q Consensus 266 G~~G-----~~Ce~~~~~~C~~~C-s~~G~C~----~G~C~C~~G~~G~~C~~~~~ 311 (791)
||+| ..|+...+..|.++| .++|+|+ ...|.|++||.|..|+....
T Consensus 123 Gy~g~~~~~~~C~~~~~~~C~~~C~~~~~~C~n~~g~y~C~C~~G~~g~~~~~~~~ 178 (186)
T 1z1y_A 123 GXVPNPEDEXXCTXTGETACQLXCNTDNEVCXNVEGVYXCQCMEGFTFDXEXNVCL 178 (186)
T ss_dssp EEEEETTTTTEEEEEECCCCCCCCCTTTEEEEEETTEEEEEECTTCEEETTTTEEE
T ss_pred CCcccCCCCCcceEcCCCcccccccccCcceecCCCCeeeECCCCCccCcccccCC
Confidence 9998 889864345788899 8999997 23899999999999988653
No 13
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Probab=99.08 E-value=1.6e-10 Score=136.05 Aligned_cols=160 Identities=18% Similarity=0.266 Sum_probs=103.9
Q ss_pred CCCcee---eccCCCcccccccCcc------cCCCCC-----CCCCCCCEEecCCCeeeeC----CCCcCCCCCccccCC
Q 003853 97 EIGRWL---SGCDSVAKEVDLVEMI------GGKSCK-----SDCSGQGVCNHELGQCRCF----HGFRGKGCSERIHFQ 158 (791)
Q Consensus 97 ~~g~~~---~~~~~~~~~~~~~~~~------~~~~C~-----~~Cs~~G~C~~~~G~C~C~----~G~~G~~Ce~~~~~~ 158 (791)
..|.+. ..|..+..+..|.... ....|. ..|+|+|+|+ .|+|.|+ +||+|..|+.. ...
T Consensus 451 g~G~~~~G~C~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~--~g~C~C~~~~~~Gy~G~~Ce~~-~~~ 527 (690)
T 3fcs_B 451 GNGTFECGVCRCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECL--CGQCVCHSSDFGKITGKYCECD-DFS 527 (690)
T ss_dssp TSEEEETTEEEECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEEC--SSSEEECCCSSCCCBSTTSCBC-SSC
T ss_pred CCCeEeCCceEeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEE--CCeeEeecCCCCCeeCCCcCcc-cCc
Confidence 355555 5676666666554322 124574 2499999998 7999999 99999999863 345
Q ss_pred CCCCCCCCCCCCCcccccCCCCCCCCCCeeeeCCCcccCCCC--C-CCcCCCc-----ccCCCC--CCCCC-CCCCcccC
Q 003853 159 CNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRP--V-AEACGFQ-----VNLPSQ--PGAPK-STDWAKAD 227 (791)
Q Consensus 159 C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~G~~c~--~-~~~C~~~-----~~~~~~--~~~~c-~~gw~g~~ 227 (791)
|.... +..|.+.+.|..+.|.|.+||+|..|+ . ...|... .....| ..|.| .+||+|..
T Consensus 528 C~~~~----------~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~g~C~C~~~Gy~G~~ 597 (690)
T 3fcs_B 528 CVRYK----------GEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCECGSCVCIQPGSYGDT 597 (690)
T ss_dssp CCBSS----------SSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEETTEEECCSTTCBSTT
T ss_pred CcCCC----------CCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeCCEEECCCCCccCCC
Confidence 65311 125765555555999999999999997 1 1234310 001111 13457 89999999
Q ss_pred cCcc--cCCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccccCcCCCCCCCcee
Q 003853 228 LDNI--FTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHC 290 (791)
Q Consensus 228 c~~~--~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C 290 (791)
|+.+ +...|.++|.|. . |. .||+|..|+.. .|...|......
T Consensus 598 Ce~C~~C~~~C~~~g~Cv-------------~----C~-~g~tG~~C~~~---~C~~~C~~~~~~ 641 (690)
T 3fcs_B 598 CEKCPTCPDACTFKKECV-------------E----CK-KFDRGALHDEN---TCNRYCRDEIES 641 (690)
T ss_dssp SCBCTTSCCTTTSCCGGG-------------T----TT-TTCCSSSSSSS---CSTTTCCCEEEC
T ss_pred cCcCCCCCCCCCCCCCcc-------------c----CC-CCCccCCCCcc---ccccccCCccEE
Confidence 9852 234555555553 2 88 89999999865 677778765443
No 14
>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A
Probab=98.97 E-value=2.1e-10 Score=112.63 Aligned_cols=111 Identities=28% Similarity=0.561 Sum_probs=75.5
Q ss_pred CCeeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCC--CCCCCCCCeeeeCCCcccCCCCCCCcCCCcccCCCC
Q 003853 137 LGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICP--THCDTTRAMCFCGEGTKYPNRPVAEACGFQVNLPSQ 214 (791)
Q Consensus 137 ~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~--g~C~~~~g~C~C~~G~~G~~c~~~~~C~~~~~~~~~ 214 (791)
...|.|++||+|+.|+.. |... ..|. +.|+ ..+.|.|.+||+|..|+.. .|
T Consensus 16 ~~~c~C~~g~~G~~C~~~----C~~~------------~~c~~~g~C~-~~g~C~C~~G~~G~~C~~~-~C--------- 68 (169)
T 2vj2_A 16 RSAVTCDDYYYGFGCNKF----CRPR------------DDFFGHYACD-QNGNKTCMEGWMGPECNRA-IC--------- 68 (169)
T ss_dssp -----CCTTEETTTTCEE----CCCE------------EETTEEEEEC-SSCCEEECTTEESTTSCEE-CC---------
T ss_pred CeeeeCCCcCcCCCcccc----cCCC------------CCcCCCCEeC-CCCeeECCCCCcCCCCCCC-CC---------
Confidence 457999999999999864 4421 1343 3454 3689999999998777431 11
Q ss_pred CCCCCCCCCcccCcCcccCCCCC-CCccccCCcchhhcccccccCccccCCCCCCCcccccccccCcCCCCCCCceec-C
Q 003853 215 PGAPKSTDWAKADLDNIFTTNGS-KPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR-G 292 (791)
Q Consensus 215 ~~~~c~~gw~g~~c~~~~~~~C~-~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~-~ 292 (791)
...|. .+|.|.. .++|.|. +||+|..|+.. .+.+.|. +|+|+ .
T Consensus 69 ------------------~~~C~~~~g~C~~------------~~~C~C~-~G~~G~~C~~C---~~~~~C~-~g~C~~~ 113 (169)
T 2vj2_A 69 ------------------RQGCSPKHGSCKL------------PGDCRCQ-YGWQGLYCDKC---IPHPGCV-HGICNEP 113 (169)
T ss_dssp ------------------CTTCCTTTEECSS------------TTCCEEC-TTEESSSSCEE---CCCTTCS-SEECSST
T ss_pred ------------------CCCCCCCCcccCC------------CCeeECC-CCCCCCCcccC---CCCCCCC-CCCcCCC
Confidence 12244 5577753 4799999 99999999853 2233476 56998 5
Q ss_pred CeeecCCCcccCCCCCc
Q 003853 293 GFCQCDSGWYGVDCSIP 309 (791)
Q Consensus 293 G~C~C~~G~~G~~C~~~ 309 (791)
+.|.|++||+|..|+..
T Consensus 114 ~~C~C~~G~~G~~C~~~ 130 (169)
T 2vj2_A 114 WQCLCETNWGGQLCDKD 130 (169)
T ss_dssp TCCEECTTEETTTTCEE
T ss_pred CEEeCCCCCCCCcccCC
Confidence 79999999999999853
No 15
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.96 E-value=2.8e-12 Score=133.15 Aligned_cols=169 Identities=12% Similarity=-0.088 Sum_probs=101.9
Q ss_pred CCCCCCCCCEEecCCC--eeeeCCCCcCCCCCcccc----------CCCCCCCCC-----CCCCCCcccccCCCCCCCC-
Q 003853 123 CKSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIH----------FQCNFPKTP-----ELPYGRWVVSICPTHCDTT- 184 (791)
Q Consensus 123 C~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~----------~~C~~~~~~-----~~~~g~~~~~~C~g~C~~~- 184 (791)
|..+|.++|+|....+ +|.|++||+|..||..+. .||.++++. ......+....|.....+.
T Consensus 36 ~~~~c~ngG~C~~g~~~y~C~Cp~Gf~G~~Ce~ni~ec~~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~ 115 (267)
T 4fbr_A 36 LDIKSDDGGKTLKGTMTYNGEGPIGFRGTLSSANNYTVENQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLT 115 (267)
T ss_dssp EEEECSSTTSEEEEEEEETTSCCEEEEEEECSTTEEEEEEESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEE
T ss_pred CCCCcCCCCeecCCCCCeEEeCCCCcccccccccccccccccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEec
Confidence 3457999999985444 699999999999998641 233332110 0000123334444333333
Q ss_pred ---CCeeeeCCCcccCCCCCCCc-CCCcccCCCCCCCCCCCC---CcccCcCc---ccCCCCCCCccccCCcchhhcccc
Q 003853 185 ---RAMCFCGEGTKYPNRPVAEA-CGFQVNLPSQPGAPKSTD---WAKADLDN---IFTTNGSKPGWCNVDPEEAYALKV 254 (791)
Q Consensus 185 ---~g~C~C~~G~~G~~c~~~~~-C~~~~~~~~~~~~~c~~g---w~g~~c~~---~~~~~C~~~G~C~~~~~~~~~~~~ 254 (791)
...|.|+.||+|..|+.... |. ....+...+|..+ +.|..|+. ....+|.++|.|.....
T Consensus 116 ~~~sy~C~C~~Gf~G~~Ce~~~d~C~---n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~------- 185 (267)
T 4fbr_A 116 GTTTYNGEGPIGFKSEVTDGDTYSVE---NQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTM------- 185 (267)
T ss_dssp EEEEETTSCCEEEEEEECCCCEEEEE---EECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEE-------
T ss_pred CCccEEeeCCCCccccCCCCCccccc---ccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCC-------
Confidence 24899999999999876432 21 2222334444443 33555542 23566788888854322
Q ss_pred cccCccccCCCCCCCccccccccc-----Cc------------------------CCCCCCCceecCC----eeecCCCc
Q 003853 255 QFKEECDCKYDGLLGQFCEVPVSS-----TC------------------------VNQCSGHGHCRGG----FCQCDSGW 301 (791)
Q Consensus 255 c~~g~C~C~~~G~~G~~Ce~~~~~-----~C------------------------~~~Cs~~G~C~~G----~C~C~~G~ 301 (791)
.++|.|+ +||+|..|+..++. .| ..+|.++|+|.+| .|.|++||
T Consensus 186 --~y~C~Cp-~Gf~G~~c~~~i~ec~~~~~c~~~~c~~gG~~~~~C~~g~n~~~c~~~c~ngGtC~dg~~sy~CeCp~GF 262 (267)
T 4fbr_A 186 --TYNGEGP-IGFRGTLTSPDTYTVENQWGGSTAPWNPGGFWMIGARNGQNVVALNVASSDGGKTLAGTMIYNGEGPIGF 262 (267)
T ss_dssp --EETTSCC-EEEEEEEEETTEEEEEEECSCTTSCCEEEEEEECCCCTTCCEEEEEEECSSTTSEEEEEEEETTSCCEEE
T ss_pred --CeEEeCC-CCccccccccccceeccCCCccCCcccCCCeEEEecCCCCccccCCcCCCCCCEeeCCCcceeecCCCCc
Confidence 5789999 99999999976532 01 1146666777633 67778877
Q ss_pred ccC
Q 003853 302 YGV 304 (791)
Q Consensus 302 ~G~ 304 (791)
+|.
T Consensus 263 ~G~ 265 (267)
T 4fbr_A 263 RAR 265 (267)
T ss_dssp EEE
T ss_pred ccc
Confidence 774
No 16
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=98.93 E-value=5.7e-10 Score=108.67 Aligned_cols=114 Identities=21% Similarity=0.365 Sum_probs=72.5
Q ss_pred CCCCCCEEecCC----Cee-eeCCCCcCCCCCccccCCCCCCCCCC--C---CCCCcccccCC--------CCCCCCCCe
Q 003853 126 DCSGQGVCNHEL----GQC-RCFHGFRGKGCSERIHFQCNFPKTPE--L---PYGRWVVSICP--------THCDTTRAM 187 (791)
Q Consensus 126 ~Cs~~G~C~~~~----G~C-~C~~G~~G~~Ce~~~~~~C~~~~~~~--~---~~g~~~~~~C~--------g~C~~~~g~ 187 (791)
+|.++|+|+..+ ++| .|++||+|.+||. |..+.... . ....+..-.|. +.|+..+|+
T Consensus 2 ~C~~~g~C~~~~~~g~~~C~~C~~g~~G~~Ce~-----C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~ 76 (162)
T 1klo_A 2 PCPGGSSCAIVPKTKEVVCTHCPTGTAGKRCEL-----CDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGE 76 (162)
T ss_dssp CSCTTCCEEECSSSCCEEECSCCTTEESTTSCE-----ECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCC
T ss_pred cCcCcCcccccCCCCCEEeCCCCCCCcCCCCcC-----CCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCc
Confidence 489999998755 489 7999999999996 44321100 0 00122333443 357777899
Q ss_pred ee-eCCCcccCCCCCCCcCCCcccCCCCCCCCCCCCCcccCcC-----cccCCCCCCCc------cccCCcchhhccccc
Q 003853 188 CF-CGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLD-----NIFTTNGSKPG------WCNVDPEEAYALKVQ 255 (791)
Q Consensus 188 C~-C~~G~~G~~c~~~~~C~~~~~~~~~~~~~c~~gw~g~~c~-----~~~~~~C~~~G------~C~~~~~~~~~~~~c 255 (791)
|. |.++|+|..|+. |++||+|..+. .+....|.+.| .|+.
T Consensus 77 C~~C~~g~~G~~Ce~-----------------C~~Gy~g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd~----------- 128 (162)
T 1klo_A 77 CLKCIYNTAGFYCDR-----------------CKEGFFGNPLAPNPADKCKACACNPYGTVQQQSSCNP----------- 128 (162)
T ss_dssp BCCBCTTEETTTTCE-----------------ECTTEEECTTCSSGGGSEEECCCCTTTBGGGCCCCCT-----------
T ss_pred ccCCCCCCcCCCcCc-----------------CchhhcCCccccCCCCCCeeccCCCCCccCCCCCCCC-----------
Confidence 95 999999988742 45677776554 11233455544 4532
Q ss_pred ccCccccCCCCCCCcccc
Q 003853 256 FKEECDCKYDGLLGQFCE 273 (791)
Q Consensus 256 ~~g~C~C~~~G~~G~~Ce 273 (791)
++++|.|+ +||+|..|+
T Consensus 129 ~tG~C~C~-~g~~G~~Cd 145 (162)
T 1klo_A 129 VTGQCQCL-PHVSGRDCG 145 (162)
T ss_dssp TTCCCCBC-TTEESTTCC
T ss_pred CCCEeECC-CCCcCCCCC
Confidence 25778887 788887776
No 17
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.61 E-value=2.9e-08 Score=114.60 Aligned_cols=99 Identities=17% Similarity=0.260 Sum_probs=41.7
Q ss_pred CCeeeeCCCcccCCCCCCCcCCCcccCCCCCCCCCCCCCcccCcCc---ccCCCCCCCccccCCcchhhccccc--ccCc
Q 003853 185 RAMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDN---IFTTNGSKPGWCNVDPEEAYALKVQ--FKEE 259 (791)
Q Consensus 185 ~g~C~C~~G~~G~~c~~~~~C~~~~~~~~~~~~~c~~gw~g~~c~~---~~~~~C~~~G~C~~~~~~~~~~~~c--~~g~ 259 (791)
.+.|.|.+++.|..|. .|..||+|..|+. +....|.+.|.|... +.| .+++
T Consensus 406 ~~~C~C~~g~~G~~C~-----------------~C~~Gy~G~~c~~~~~C~~C~C~~~gtc~~~-------~~Cd~~tg~ 461 (525)
T 4aqs_A 406 AGQCRCKLHVEGERCD-----------------VCKEGFYDLSAEDPYGCKSCACNPLGTIPGG-------NPCDSETGY 461 (525)
T ss_dssp SSCCCBCTTEETTTTC-----------------EECTTEECCCTTSTTSSEECCCCTTTBCCSS-------CCBCTTTCC
T ss_pred CCccCCCCCCCCCccc-----------------CCCCCCcCCCCCCCCCCccCCCCCCceecCC-------CcccCCCCE
Confidence 4567777777776652 1456676665542 224456666666431 111 2578
Q ss_pred cccCCCCCCCccccccc---------ccCc-CCCCCCCcee----c--CCeeecCCCcccCCCCC
Q 003853 260 CDCKYDGLLGQFCEVPV---------SSTC-VNQCSGHGHC----R--GGFCQCDSGWYGVDCSI 308 (791)
Q Consensus 260 C~C~~~G~~G~~Ce~~~---------~~~C-~~~Cs~~G~C----~--~G~C~C~~G~~G~~C~~ 308 (791)
|.|+ +||+|..|+... ...| +.+|.++|.| . +|.|.|++||+|..|++
T Consensus 462 C~C~-~g~~G~~Ce~C~~G~~g~~~~~~~C~~C~C~~~gs~~~~C~~~tG~C~C~~G~~G~~Ceq 525 (525)
T 4aqs_A 462 CYCK-RLVTGQRCDQCLPQHWGLSNDLDGCRPCDCDLGGALNNSCSEDSGQCSCLPHMIGRQCNE 525 (525)
T ss_dssp BCBC-TTCCSTTTCC--------------------------------------------------
T ss_pred EECC-CCCcCCCcccCCCCccCCCCCCCCCcCCCCCCCCccCCccCCCCCeeECCCCCcCCCCCC
Confidence 9999 999999998421 1223 2357666654 3 57899999999999984
No 18
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=98.55 E-value=3.7e-08 Score=93.60 Aligned_cols=63 Identities=22% Similarity=0.447 Sum_probs=42.4
Q ss_pred CCCCCccccCCcchhhcccccccCccccCCCCCCCc------------ccccccccCcC---CCCCCCceec----CCee
Q 003853 235 NGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQ------------FCEVPVSSTCV---NQCSGHGHCR----GGFC 295 (791)
Q Consensus 235 ~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~------------~Ce~~~~~~C~---~~Cs~~G~C~----~G~C 295 (791)
.|.+++.|...+. .++|.|+ +||+|. .|+. .+.|. ++|.++++|+ ...|
T Consensus 54 ~C~~~~~C~n~~g---------~y~C~C~-~Gy~g~~~~~~~~~~~~~~C~d--ideC~~~~~~C~~~~~C~n~~g~y~C 121 (143)
T 2bou_A 54 SCGKFSDCWNTEG---------SYDCVCS-PGYEPVSGAKTFKNESENTCQD--VDECSSGQHQCDSSTVCFNTVGSYSC 121 (143)
T ss_dssp CCCTTEEEEECSS---------CEEEEEC-TTEEETTCCSCBSSGGGCCEEE--CCHHHHTCCCCCTTSEEEECSSCEEE
T ss_pred CCCCCCEEEcCCC---------CeEeECC-CCcccCcCccccccCCCCCcCC--ccCccCcCCCCCCCCEEECCCCCEEe
Confidence 4556666754322 4577787 788776 4442 23343 6799999997 3489
Q ss_pred ecCCCcccCCCCCc
Q 003853 296 QCDSGWYGVDCSIP 309 (791)
Q Consensus 296 ~C~~G~~G~~C~~~ 309 (791)
.|++||.|..+...
T Consensus 122 ~C~~Gy~g~~~~~~ 135 (143)
T 2bou_A 122 RCRPGWKPRHGIPN 135 (143)
T ss_dssp ECCSSSCBCTTCCS
T ss_pred eCCCCcccCCCCcc
Confidence 99999999887653
No 19
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=98.46 E-value=2.2e-08 Score=113.56 Aligned_cols=77 Identities=23% Similarity=0.553 Sum_probs=32.3
Q ss_pred CCCCCCcccCcCc-ccCCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccccCcCCCCCCCceec-CCee
Q 003853 218 PKSTDWAKADLDN-IFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR-GGFC 295 (791)
Q Consensus 218 ~c~~gw~g~~c~~-~~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~-~G~C 295 (791)
.|..+|+|..|+. .+...|.+ |.|.. .++|.|. +||+|..|++. .|.++|+++|+|+ .+.|
T Consensus 380 ~C~~~~~g~~c~~~~C~~~C~n-G~C~~------------~~~C~C~-~G~~G~~C~~~---~C~~~C~~~g~C~~~~~C 442 (463)
T 2wg3_C 380 ECRATVQPAQTLTSECSRLCRN-GYCTP------------TGKCCCS-PGWEGDFCRTA---KCEPACRHGGVCVRPNKC 442 (463)
T ss_dssp GGCCCCCCCCCCCCHHHHHCCS-EEECT------------TSCEEEC-TTEESTTSCEE---CC----------------
T ss_pred cCCCCCcCCCCccccccCCCCC-CccCC------------CCeECCC-CCcCCCcCCcC---cCCCCCCCCCEECCCCEE
Confidence 4667777776652 11234665 77853 4689998 99999999865 7888999999998 4899
Q ss_pred ecCCCcccCCCCCccc
Q 003853 296 QCDSGWYGVDCSIPSV 311 (791)
Q Consensus 296 ~C~~G~~G~~C~~~~~ 311 (791)
.|.+||+|..|+...+
T Consensus 443 ~C~~G~~G~~C~~~~~ 458 (463)
T 2wg3_C 443 LCKKGYLGPQCEQVDH 458 (463)
T ss_dssp ----------------
T ss_pred ECCCCcccCCCCCCcc
Confidence 9999999999998653
No 20
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=98.32 E-value=4e-07 Score=105.81 Aligned_cols=151 Identities=20% Similarity=0.314 Sum_probs=84.8
Q ss_pred CCC-CCCCCCCCEEecCC-C--ee-eeCCCCcC--CCCCccccCCCCCCCCCCCCCCCcccccCCC-----CCCCCC--C
Q 003853 121 KSC-KSDCSGQGVCNHEL-G--QC-RCFHGFRG--KGCSERIHFQCNFPKTPELPYGRWVVSICPT-----HCDTTR--A 186 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~-G--~C-~C~~G~~G--~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g-----~C~~~~--g 186 (791)
.+| .++|.++|+|.... | +| .|++||+| ..|+. ..+|.... ..|.. .|.... .
T Consensus 4 DeC~~nPC~~gg~C~n~~~Gsy~C~~C~~GytGdg~~CeD--iDEC~~~p-----------~~C~~gg~~~~CvNt~gsY 70 (634)
T 1yo8_A 4 DGCLSNPCFPGAQCSSFPDGSWSCGFCPVGFLGNGTHCED--LDECALVP-----------DICFSTSKVPRCVNTQPGF 70 (634)
T ss_dssp CGGGGCCSCTTCCEEECTTSCEEECCCCTTBCSCSSSCCB--CCTTTTSC-----------CCSCCCSSSCCEEECSSSE
T ss_pred cccCCCCCCCCCEEecCCCCCeECCcCCCccCCCCCCccc--cccccCCC-----------CcccCCccccceeeccCce
Confidence 567 67899999998655 3 69 99999999 78973 46776421 12542 454443 4
Q ss_pred eee-eCCCcccCCCCCCCcCCCcccCCCCCCCCCCCCCcccCcCcccCCCCCCCccccCCcchhhcccccccCccccCCC
Q 003853 187 MCF-CGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYD 265 (791)
Q Consensus 187 ~C~-C~~G~~G~~c~~~~~C~~~~~~~~~~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~ 265 (791)
.|. |++||+|..|..............|.. -..|. .....|.+++.|...... .-..++|.|+ +
T Consensus 71 ~C~~C~~Gy~G~~c~g~g~~~~~~dg~~C~d--------ideC~-~~~~pC~~~~~Cvnt~~~-----~~GsY~C~C~-~ 135 (634)
T 1yo8_A 71 HCLPCPPRYRGNQPVGVGLEAAKTEKQVCEP--------ENPCK-DKTHNCHKHAECIYLGHF-----SDPMYKCECQ-T 135 (634)
T ss_dssp EECCCCTTEEECCCEESSSHHHHSCCCCEEE--------CCTTT-TTCCCCCTTEEEEECCTT-----CSSSEEEEEC-T
T ss_pred ecccCCCCcccCccccccccccccCCCcccc--------ccccc-CCCcccccCccccccccc-----cccceeeecc-C
Confidence 898 999999987741000000000000000 00111 012468888889654300 0015799999 9
Q ss_pred CCCC--ccccccc-ccCcCCCCCCCceec---CCeee---cCCCcc
Q 003853 266 GLLG--QFCEVPV-SSTCVNQCSGHGHCR---GGFCQ---CDSGWY 302 (791)
Q Consensus 266 G~~G--~~Ce~~~-~~~C~~~Cs~~G~C~---~G~C~---C~~G~~ 302 (791)
||+| ..|+..+ ...|+. ..+.|. ...|+ |+.++.
T Consensus 136 Gy~GdG~~Ce~d~DiDeC~~---~~~~C~~~~~y~C~~dnC~~~pn 178 (634)
T 1yo8_A 136 GYAGDGLICGEDSDLDGWPN---LNLVCATNATYHCIKDNCPHLPN 178 (634)
T ss_dssp TEEESSSSEEECTTSSSSCS---SCCTTTTTCSSSCSCCSSTTSCC
T ss_pred CccccCcccccccCcccccC---CCCcccCCCCccccccccccccC
Confidence 9998 7998532 234431 223343 34554 776653
No 21
>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*
Probab=98.24 E-value=6.2e-09 Score=108.09 Aligned_cols=112 Identities=12% Similarity=-0.020 Sum_probs=76.8
Q ss_pred CeeeeCCCcccCCCCCCCc-CCCcccCCCCCCCCCCCCC---cccCcCc---ccCCCCCCCccccCCcchhhcccccccC
Q 003853 186 AMCFCGEGTKYPNRPVAEA-CGFQVNLPSQPGAPKSTDW---AKADLDN---IFTTNGSKPGWCNVDPEEAYALKVQFKE 258 (791)
Q Consensus 186 g~C~C~~G~~G~~c~~~~~-C~~~~~~~~~~~~~c~~gw---~g~~c~~---~~~~~C~~~G~C~~~~~~~~~~~~c~~g 258 (791)
..|.|+.||+|..|+.... |. ..+.|...+|.+|. .|..|+. +.+.+|.++|.|..... .+
T Consensus 53 y~C~Cp~Gf~G~~Ce~ni~ec~---~~~~c~s~pC~nggtc~~G~~c~~~~eC~s~pC~ngG~C~~~~~---------sy 120 (267)
T 4fbr_A 53 YNGEGPIGFRGTLSSANNYTVE---NQWGGTSAPWQPGGVWVLGARDKQNIVAVSIKSNDGGKTLTGTT---------TY 120 (267)
T ss_dssp ETTSCCEEEEEEECSTTEEEEE---EESSSTTSCEEEEEEEECCCCSSCCEEEEEEECSSTTSEEEEEE---------EE
T ss_pred eEEeCCCCcccccccccccccc---cccCcCCCcccCCCeeeccCccccccccCCCCCCCCCEEecCCc---------cE
Confidence 4899999999999865432 21 22334555565543 4555542 33567888888864322 57
Q ss_pred ccccCCCCCCCccccccccc-----------------------------CcCCCCCCCceecCC----eeecCCCcccCC
Q 003853 259 ECDCKYDGLLGQFCEVPVSS-----------------------------TCVNQCSGHGHCRGG----FCQCDSGWYGVD 305 (791)
Q Consensus 259 ~C~C~~~G~~G~~Ce~~~~~-----------------------------~C~~~Cs~~G~C~~G----~C~C~~G~~G~~ 305 (791)
+|+|+ +||+|..|+..+.. .+.++|.++|+|.++ +|.|++||+|..
T Consensus 121 ~C~C~-~Gf~G~~Ce~~~d~C~n~~~c~s~pC~ngg~c~~G~~c~~~i~c~~~~c~ngg~C~dg~~~y~C~Cp~Gf~G~~ 199 (267)
T 4fbr_A 121 NGEGP-IGFKSEVTDGDTYSVENQWGGSAAPWHSGGVWVLGTRGKQNVINVDAKSNDGGKTLSGTMTYNGEGPIGFRGTL 199 (267)
T ss_dssp TTSCC-EEEEEEECCCCEEEEEEECSSTTSCCEEEEEEECCSSTTSCEEEEEEECSSTTSEEEEEEEETTSCCEEEEEEE
T ss_pred EeeCC-CCccccCCCCCcccccccCCcCCccccCCcceecccccccccccCCCCCCCCCEeeCCCCCeEEeCCCCccccc
Confidence 99999 99999999976421 112367888888743 799999999999
Q ss_pred CCCcc
Q 003853 306 CSIPS 310 (791)
Q Consensus 306 C~~~~ 310 (791)
|+...
T Consensus 200 c~~~i 204 (267)
T 4fbr_A 200 TSPDT 204 (267)
T ss_dssp EETTE
T ss_pred ccccc
Confidence 98754
No 22
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.23 E-value=7.3e-07 Score=98.45 Aligned_cols=55 Identities=25% Similarity=0.469 Sum_probs=0.0
Q ss_pred ccCcCcccCCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccccCcCCCCCCCceec--CCeeecCCC
Q 003853 225 KADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR--GGFCQCDSG 300 (791)
Q Consensus 225 g~~c~~~~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~--~G~C~C~~G 300 (791)
|..|+. ....|.++|.|.. ..+|.|+ +||+|..|+.. .|.++|+|+ .|.|.=+.|
T Consensus 363 g~~CD~-~t~~C~ngg~C~~------------~~~C~C~-~G~~G~~Ce~c-------~C~~~g~C~~~~Gqc~~~~~ 419 (426)
T 3zyj_B 363 TNVCDN-ELLHCQNGGTCHN------------NVRCLCP-AAYTGILCEKL-------RCEEAGSCGSDSGQGAPPHG 419 (426)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred cCcccc-CcccCCCCCCcCC------------CCCCcCC-CCCcCCCCcCC-------CCCCCCcccCCCCccCCCCC
Confidence 344542 2356888888864 2389999 99999999853 477789997 677765544
No 23
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.23 E-value=6.6e-07 Score=78.28 Aligned_cols=51 Identities=37% Similarity=0.803 Sum_probs=40.6
Q ss_pred cCccccCCCCCCCcccc-cccccCcCCCCCCCceec------CCeeecCCCcccCCCCCcc
Q 003853 257 KEECDCKYDGLLGQFCE-VPVSSTCVNQCSGHGHCR------GGFCQCDSGWYGVDCSIPS 310 (791)
Q Consensus 257 ~g~C~C~~~G~~G~~Ce-~~~~~~C~~~Cs~~G~C~------~G~C~C~~G~~G~~C~~~~ 310 (791)
.++|.|+ +||+ .|+ ..++..-.++|.++|+|+ ...|.|++||+|..|++.+
T Consensus 31 ~y~C~C~-~G~~--~C~~~~~~~C~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~i 88 (91)
T 1tpg_A 31 VEYCWCN-SGRA--QCHSVPVKSCSEPRCFNGGTCQQALYFSDFVCQCPEGFAGKSCEIDT 88 (91)
T ss_dssp EEEEECS-SSCC--BCCEECEEECSSCCSCTTCEEEEESSSSCEEEECCTTCBSSSCCBCS
T ss_pred CcEeECC-CCCc--ccccCcCCcccCCCCCCCCEeecCCCCCCeEeECCCCCcCCcCCcCC
Confidence 4689998 9998 898 343344457899999996 2279999999999999753
No 24
>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A
Probab=98.21 E-value=1.4e-07 Score=93.77 Aligned_cols=132 Identities=15% Similarity=0.298 Sum_probs=82.7
Q ss_pred CCCceeeccCCCcccc---cccCcccCCCCC-----CCCCCCCEEecCC-----C--eeeeCCCCcCCCCCccccCCCCC
Q 003853 97 EIGRWLSGCDSVAKEV---DLVEMIGGKSCK-----SDCSGQGVCNHEL-----G--QCRCFHGFRGKGCSERIHFQCNF 161 (791)
Q Consensus 97 ~~g~~~~~~~~~~~~~---~~~~~~~~~~C~-----~~Cs~~G~C~~~~-----G--~C~C~~G~~G~~Ce~~~~~~C~~ 161 (791)
..|.|...|..+.... .+. + .++|. .+|.++|+|.... | +|.|++||+|..|+-. ..+|..
T Consensus 21 ~~g~~~C~C~~G~~g~~~~~C~-~--id~C~~~~~~~~C~~~~~C~~~~~~~~~g~y~C~C~~G~~g~~~~C~-~d~C~~ 96 (186)
T 1z1y_A 21 MSNHFXCMCNEGLVHLSENTCE-E--XNECXXETLGXACGEFGQCIENPDPAQVNMYXCGCIEGYTLXEDTCV-LDVCQY 96 (186)
T ss_dssp CSSCEEEEECTTEEEEETTEEE-E--CCCCSGGGTTSEEETTEEEEECSSTTSSCSEEEEECTTEEEETTEEE-EGGGTT
T ss_pred CCCCeEeECCCCCccCCCCccC-C--CCcccCCCCCCCCCCCCEeecCCCCcCCCCEECCCCCCCccCCCCCC-CCcCcC
Confidence 4567778887776554 333 2 26774 4699999998765 4 7999999999976533 345653
Q ss_pred CCCCCCCCCCcccccCC--CCCC----CCC--CeeeeCCCcccCCCCCCCcCCCcccCCCCCCCCCCCCCcccCcCcccC
Q 003853 162 PKTPELPYGRWVVSICP--THCD----TTR--AMCFCGEGTKYPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFT 233 (791)
Q Consensus 162 ~~~~~~~~g~~~~~~C~--g~C~----~~~--g~C~C~~G~~G~~c~~~~~C~~~~~~~~~~~~~c~~gw~g~~c~~~~~ 233 (791)
. .|. +.|. ... ..|.|++||+|..+. +..|... .. ..| .
T Consensus 97 ~-------------~C~~~g~C~~~~~~~~g~~~C~C~~Gy~g~~~~-~~~C~~~-~~--------------~~C----~ 143 (186)
T 1z1y_A 97 X-------------NCGESGECIVEYLSEIQSAGCSCAIGXVPNPED-EXXCTXT-GE--------------TAC----Q 143 (186)
T ss_dssp C-------------CCCTTEEEEEEEETTEEEEEEEECTEEEEETTT-TTEEEEE-EC--------------CCC----C
T ss_pred C-------------CCCCCCEEeeCCcCCCCCceEECCCCCcccCCC-CCcceEc-CC--------------Ccc----c
Confidence 2 343 3343 332 389999999983211 1112100 00 001 1
Q ss_pred CCC-CCCccccCCcchhhcccccccCccccCCCCCCCcccccc
Q 003853 234 TNG-SKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVP 275 (791)
Q Consensus 234 ~~C-~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~ 275 (791)
..| .++|.|....+ .++|.|+ +||+|..|+..
T Consensus 144 ~~C~~~~~~C~n~~g---------~y~C~C~-~G~~g~~~~~~ 176 (186)
T 1z1y_A 144 LXCNTDNEVCXNVEG---------VYXCQCM-EGFTFDXEXNV 176 (186)
T ss_dssp CCCCTTTEEEEEETT---------EEEEEEC-TTCEEETTTTE
T ss_pred ccccccCcceecCCC---------CeeeECC-CCCccCccccc
Confidence 357 77888865322 4689999 99999999864
No 25
>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A
Probab=98.06 E-value=1.6e-06 Score=75.75 Aligned_cols=84 Identities=19% Similarity=0.343 Sum_probs=54.4
Q ss_pred eeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCCCCeeeeCCCcccCCCC-C-CCcCCCcccCCCCCC
Q 003853 139 QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKYPNRP-V-AEACGFQVNLPSQPG 216 (791)
Q Consensus 139 ~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~G~~c~-~-~~~C~~~~~~~~~~~ 216 (791)
+|.|++||+|..|+.. +|.. ..|... .....|.|++||+ .|+ . .+.|
T Consensus 3 ~C~C~~g~~g~~c~~~---~c~~-------------~pC~n~--~~~y~C~C~~G~~--~C~~~~~~~C----------- 51 (91)
T 1tpg_A 3 QVICRDEKTQMIYQQH---QSWL-------------RPVLRS--NRVEYCWCNSGRA--QCHSVPVKSC----------- 51 (91)
T ss_dssp CCCCBCSSSCCBCCSS---CEEE-------------EECSSS--SCEEEEECSSSCC--BCCEECEEEC-----------
T ss_pred eeECCCCCcCCeECCC---cccC-------------CccccC--CCCcEeECCCCCc--ccccCcCCcc-----------
Confidence 6999999999999753 3321 123211 1134899999997 453 1 1112
Q ss_pred CCCCCCCcccCcCcccCCCCCCCccccCCcchhhcccccccCccccCCCCCCCccccccc
Q 003853 217 APKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPV 276 (791)
Q Consensus 217 ~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~ 276 (791)
..++|.++|.|...... ..++|.|+ +||+|..|++.+
T Consensus 52 ---------------~~~pC~ngg~C~~~~~~-------~~~~C~C~-~G~~G~~Ce~~i 88 (91)
T 1tpg_A 52 ---------------SEPRCFNGGTCQQALYF-------SDFVCQCP-EGFAGKSCEIDT 88 (91)
T ss_dssp ---------------SSCCSCTTCEEEEESSS-------SCEEEECC-TTCBSSSCCBCS
T ss_pred ---------------cCCCCCCCCEeecCCCC-------CCeEeECC-CCCcCCcCCcCC
Confidence 14568899999643200 14689999 999999999764
No 26
>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*
Probab=98.04 E-value=2.5e-06 Score=80.08 Aligned_cols=67 Identities=28% Similarity=0.623 Sum_probs=53.4
Q ss_pred CCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccccCcCCCCCCCceec----CCeeecCCCcccCCCCC
Q 003853 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCR----GGFCQCDSGWYGVDCSI 308 (791)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~----~G~C~C~~G~~G~~C~~ 308 (791)
..+|.++|.|....+ .++|.|+ +||+|..|+..+...-.++|.++|+|+ ...|.|++||+|..|+.
T Consensus 12 ~~~C~~~g~C~~~~g---------~~~C~C~-~Gy~G~~C~~~~~~C~~~~C~~~~~C~~~~g~~~C~C~~G~~G~~C~~ 81 (135)
T 2vj3_A 12 ANPCEHAGKCINTLG---------SFECQCL-QGYTGPRCEIDVNECVSNPCQNDATCLDQIGEFQCICMPGYEGVHCEV 81 (135)
T ss_dssp SCSSSTTCEEEECSS---------SEEEECC-TTEESTTSCEECCTTTTCCCCSSCEEEECSSCEEEECCTTEESSSSCE
T ss_pred CCCCCCCCEeECCCC---------CEEEECC-CCCcCCcccccCccCCCCCCCCCCEEeCCCCCceeeCCCCCcCCccee
Confidence 456888899975432 4699999 999999998765444457899999997 34899999999999985
Q ss_pred c
Q 003853 309 P 309 (791)
Q Consensus 309 ~ 309 (791)
.
T Consensus 82 ~ 82 (135)
T 2vj3_A 82 N 82 (135)
T ss_dssp E
T ss_pred c
Confidence 3
No 27
>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A
Probab=98.02 E-value=1.4e-06 Score=88.49 Aligned_cols=62 Identities=31% Similarity=0.735 Sum_probs=50.7
Q ss_pred CCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccc--------cCcC-----CCCCCCceecCCeeecCC
Q 003853 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVS--------STCV-----NQCSGHGHCRGGFCQCDS 299 (791)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~--------~~C~-----~~Cs~~G~C~~G~C~C~~ 299 (791)
+..|+++|.|. .+.|.|. +||+|..|+.+.. ..|. ++|+++|+|+.|.|.|.+
T Consensus 95 ~~~Csg~G~C~-------------~g~C~C~-~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~g~C~C~~ 160 (217)
T 2p28_B 95 RSLCHGKGFLE-------------CGICRCD-TGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHT 160 (217)
T ss_dssp -CTTTTSEEEE-------------TTEEEEC-TTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEETTEEEECC
T ss_pred CCccCCCceEE-------------CCEEECC-CCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeCCceECCC
Confidence 44678888885 5799998 9999999996532 1353 569999999999999999
Q ss_pred C------cccCCCCC
Q 003853 300 G------WYGVDCSI 308 (791)
Q Consensus 300 G------~~G~~C~~ 308 (791)
| |+|..|+.
T Consensus 161 gw~~~~~~~G~~Ce~ 175 (217)
T 2p28_B 161 SDVPGKLIYGQYCEC 175 (217)
T ss_dssp CCSTTCCEESTTSCE
T ss_pred CCCCcccEECCCccc
Confidence 9 59999995
No 28
>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}
Probab=98.00 E-value=1.6e-05 Score=91.60 Aligned_cols=45 Identities=29% Similarity=0.682 Sum_probs=28.9
Q ss_pred ccCCCCCCCcccccccccCc-CCCCCC------Cceec--CCeeecCCCcccCCCCC
Q 003853 261 DCKYDGLLGQFCEVPVSSTC-VNQCSG------HGHCR--GGFCQCDSGWYGVDCSI 308 (791)
Q Consensus 261 ~C~~~G~~G~~Ce~~~~~~C-~~~Cs~------~G~C~--~G~C~C~~G~~G~~C~~ 308 (791)
.|. +||.|..|+... .| +.+|.+ ++.|+ .|.|.|++||+|..|++
T Consensus 422 ~C~-~Gy~G~~c~~~~--~C~~C~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~ 475 (525)
T 4aqs_A 422 VCK-EGFYDLSAEDPY--GCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQ 475 (525)
T ss_dssp EEC-TTEECCCTTSTT--SSEECCCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC
T ss_pred CCC-CCCcCCCCCCCC--CCccCCCCCCceecCCCcccCCCCEEECCCCCcCCCccc
Confidence 465 666665555321 22 234544 44554 67999999999999985
No 29
>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}
Probab=97.94 E-value=5.4e-06 Score=78.32 Aligned_cols=69 Identities=28% Similarity=0.694 Sum_probs=51.0
Q ss_pred CCCCCCCccccCCcchhhcccccccCccccCCCCCCCccccccc-----------ccCc-CCCCCCCceec---------
Q 003853 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPV-----------SSTC-VNQCSGHGHCR--------- 291 (791)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~-----------~~~C-~~~Cs~~G~C~--------- 291 (791)
.++|.++|.|...... ..++|.|+ +||+|..|+..+ ...| .++|.++|+|+
T Consensus 5 ~~pC~~~g~C~~~~~~-------g~~~C~C~-~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~ 76 (143)
T 4d90_A 5 PNPCENGGICLPGLAD-------GSFSCECP-DGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDT 76 (143)
T ss_dssp SCCCGGGCEEEC------------CCEEECC-TTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTE
T ss_pred CCcCCCCCEeeCCCCC-------CCEEeECC-CCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCC
Confidence 5678888999753210 14689999 999999998632 1234 35799999997
Q ss_pred --CCeeecCCCcccCCCCCc
Q 003853 292 --GGFCQCDSGWYGVDCSIP 309 (791)
Q Consensus 292 --~G~C~C~~G~~G~~C~~~ 309 (791)
...|.|++||.|..|+..
T Consensus 77 ~~~~~C~C~~G~~G~~C~~~ 96 (143)
T 4d90_A 77 FIGYVCKCPRGFNGIHCQHN 96 (143)
T ss_dssp ECCEEEECCTTEESTTSCEE
T ss_pred CCCeEeECcCCCcCCCcccC
Confidence 458999999999999853
No 30
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=97.88 E-value=8.9e-07 Score=84.43 Aligned_cols=46 Identities=30% Similarity=0.580 Sum_probs=34.4
Q ss_pred cCccccCCCCCC---CcccccccccCc---CCCCCCCceec----CCeeecCCCcccCCC
Q 003853 257 KEECDCKYDGLL---GQFCEVPVSSTC---VNQCSGHGHCR----GGFCQCDSGWYGVDC 306 (791)
Q Consensus 257 ~g~C~C~~~G~~---G~~Ce~~~~~~C---~~~Cs~~G~C~----~G~C~C~~G~~G~~C 306 (791)
.+.|.|+ +||+ |..|+. + +.| +..|.+ |+|+ ...|.|++||.|...
T Consensus 87 ~~~C~C~-~Gy~~~~g~~C~d-i-deC~~~~~~C~~-g~C~n~~g~y~C~C~~Gy~g~~~ 142 (147)
T 2w86_A 87 QVDPICG-KGYSRIKGTQCED-I-DECEVFPGVCKN-GLCVNTRGSFKCQCPSGMTLDAT 142 (147)
T ss_dssp CCCTTTC-TTEEEEETTEEEE-C-CHHHHSTTCSSS-SEEEEETTEEEEECCTTCCBCTT
T ss_pred CCcccCC-CccccCCCCccCc-c-ccccCCCCCCCC-CEEECCCCCEEeeCCCCCccCCC
Confidence 3679999 9995 999983 2 345 345984 6997 348999999998653
No 31
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=97.85 E-value=1.7e-06 Score=83.79 Aligned_cols=126 Identities=24% Similarity=0.546 Sum_probs=71.9
Q ss_pred CCC--CCCCCCCCEEecCCC--eeeeCCCCc----CCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCC------CC
Q 003853 121 KSC--KSDCSGQGVCNHELG--QCRCFHGFR----GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTT------RA 186 (791)
Q Consensus 121 ~~C--~~~Cs~~G~C~~~~G--~C~C~~G~~----G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~------~g 186 (791)
++| +++|. +|+|+...| +|.|++||+ |..|+.....+|.....+.. ....+.|... ..
T Consensus 4 deC~~~~~C~-~~~C~n~~gsy~C~C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~-------~~~~~~C~~~~~~~~~~~ 75 (162)
T 1uzk_A 4 NECLDPTTCI-SGNCVNTPGSYICDCPPDFELNPTRVGCVDTRSGNCYLDIRPRG-------DNGDTACSNEIGVGVSKA 75 (162)
T ss_dssp CGGGSTTSSB-TSEEEEETTEEEEECCTTCEECTTSSBEECCCCEEEEEEC-----------------CEEEEEEEECHH
T ss_pred ccCCCCCCCC-CCEeECCCCCEEEeCCCCCeECCCCCcccCCCCCcccCCCcccC-------CCCCCcccCCcCCcccCc
Confidence 567 46796 799987667 799999998 88998432223543110000 0012334332 23
Q ss_pred eeeeCCCcc-cCCCCCCCcCCCcccCCCCCCCCCCCCCcccCcCcccCCCCCCCccccCCcchhhcccccccCccccCCC
Q 003853 187 MCFCGEGTK-YPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYD 265 (791)
Q Consensus 187 ~C~C~~G~~-G~~c~~~~~C~~~~~~~~~~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~ 265 (791)
.|.|++||. |..| + .|..... ..+.|.|+ +
T Consensus 76 ~C~C~~G~~~~~~C-----------------------------~-----------~C~~~~~--------~~y~C~C~-~ 106 (162)
T 1uzk_A 76 SCCCSLGKAWGTPC-----------------------------E-----------MCPAVNT--------SEYKILCP-G 106 (162)
T ss_dssp HHHTTTCCEETTTT-----------------------------E-----------ECCCTTS--------HHHHHHCT-T
T ss_pred eeeCCCCCCcCCCc-----------------------------c-----------cCCCCCC--------CCceeECC-C
Confidence 677888876 2222 1 1211100 14689997 6
Q ss_pred --CCCCcc---cccccccCcC---CCCCCCceec----CCeeecCCCcccCC
Q 003853 266 --GLLGQF---CEVPVSSTCV---NQCSGHGHCR----GGFCQCDSGWYGVD 305 (791)
Q Consensus 266 --G~~G~~---Ce~~~~~~C~---~~Cs~~G~C~----~G~C~C~~G~~G~~ 305 (791)
||+|.. +.+.+ +.|. ++|.+ |+|+ ...|.|++||.|..
T Consensus 107 g~G~~~~~~~~~c~di-deC~~~~~~C~~-g~C~n~~gsy~C~C~~Gy~g~~ 156 (162)
T 1uzk_A 107 GEGFRPNPITVILEDI-DECQELPGLCQG-GKCINTFGSFQCRCPTGYYLNE 156 (162)
T ss_dssp CTTEEECTTTCCEEEC-CHHHHCGGGGBT-SEEEECSSCEEEECCTTCCBCT
T ss_pred CCCcccCCCCCccCcc-ccccCCCCCcCC-CEeEcCCCCEEeeCCCCccCCC
Confidence 898862 22222 3443 45874 7997 44999999999865
No 32
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=97.85 E-value=1.2e-05 Score=73.24 Aligned_cols=67 Identities=28% Similarity=0.784 Sum_probs=47.1
Q ss_pred CCCCCCCCCCCEEecCCC--eeeeCCCCcCCCCCccc-cCCCCCCCCCCCCCCCcccccCCCCCCCCC--CeeeeCCCcc
Q 003853 121 KSCKSDCSGQGVCNHELG--QCRCFHGFRGKGCSERI-HFQCNFPKTPELPYGRWVVSICPTHCDTTR--AMCFCGEGTK 195 (791)
Q Consensus 121 ~~C~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~-~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~--g~C~C~~G~~ 195 (791)
.+|...|.++|+|....| +|.|++||+|..|+..+ ..+|.... ..|...|.... ..|.|++||+
T Consensus 16 ~~C~~~C~~~g~C~~~~~~y~C~C~~G~~G~~C~~~~~~~~C~~~~-----------~~C~~~C~n~~g~y~C~C~~G~~ 84 (114)
T 1aut_L 16 HPCASLCCGHGTCIDGIGSFSCDCRSGWEGRFCQREVSFLNCSLDN-----------GGCTHYCLEEVGWRRCSCAPGYK 84 (114)
T ss_dssp CSSSSTTTTSEEECCCSSCCCEEECTTEESTTSCEECCSSSSSSGG-----------GGCSSEEEECSSSEEEECCTTEE
T ss_pred ccccccCCCcCCCCCCCCCcEeeCCCCCcCCCcCcCCcCCcCcCCC-----------CCCCCEeECCCCCEEeECCCCee
Confidence 456667999999986555 79999999999999753 23565311 13445565544 3899999999
Q ss_pred cCC
Q 003853 196 YPN 198 (791)
Q Consensus 196 G~~ 198 (791)
|..
T Consensus 85 ~~~ 87 (114)
T 1aut_L 85 LGD 87 (114)
T ss_dssp ECT
T ss_pred ECC
Confidence 643
No 33
>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A
Probab=97.84 E-value=5.4e-06 Score=80.44 Aligned_cols=99 Identities=20% Similarity=0.368 Sum_probs=62.4
Q ss_pred CCCceeeccCCCcccccccCcccCCCC-CCCCCCC------CEEecCCCeee-eCCCCcCCCCCccccCCCCCCCCCCC-
Q 003853 97 EIGRWLSGCDSVAKEVDLVEMIGGKSC-KSDCSGQ------GVCNHELGQCR-CFHGFRGKGCSERIHFQCNFPKTPEL- 167 (791)
Q Consensus 97 ~~g~~~~~~~~~~~~~~~~~~~~~~~C-~~~Cs~~------G~C~~~~G~C~-C~~G~~G~~Ce~~~~~~C~~~~~~~~- 167 (791)
..|..++.|.......+.........| +-.|+++ ++|+..+|+|. |.+||+|..|+. |..+.....
T Consensus 27 ~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~~~tG~C~~C~~g~~G~~Ce~-----C~~Gy~g~~~ 101 (162)
T 1klo_A 27 TAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCNRLTGECLKCIYNTAGFYCDR-----CKEGFFGNPL 101 (162)
T ss_dssp EESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBCTTTCCBCCBCTTEETTTTCE-----ECTTEEECTT
T ss_pred CcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCcccCCCCcccCCCCCCcCCCcCc-----CchhhcCCcc
Confidence 456666667666554433221112355 4567776 68998899995 999999999996 543311110
Q ss_pred ---CCCCcccccCC--------CCCCCCCCeeeeCCCcccCCCC
Q 003853 168 ---PYGRWVVSICP--------THCDTTRAMCFCGEGTKYPNRP 200 (791)
Q Consensus 168 ---~~g~~~~~~C~--------g~C~~~~g~C~C~~G~~G~~c~ 200 (791)
....+..-.|. +.|+..+|+|.|.+||+|..|+
T Consensus 102 ~~~~~~~C~~C~C~~~Gs~~~~~~Cd~~tG~C~C~~g~~G~~Cd 145 (162)
T 1klo_A 102 APNPADKCKACACNPYGTVQQQSSCNPVTGQCQCLPHVSGRDCG 145 (162)
T ss_dssp CSSGGGSEEECCCCTTTBGGGCCCCCTTTCCCCBCTTEESTTCC
T ss_pred ccCCCCCCeeccCCCCCccCCCCCCCCCCCEeECCCCCcCCCCC
Confidence 11223333453 2688888999999999988773
No 34
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=97.72 E-value=5.6e-06 Score=93.84 Aligned_cols=67 Identities=24% Similarity=0.566 Sum_probs=29.5
Q ss_pred cccCCCCCCCCCCCCEEecCCCeeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCC-CCeeeeCCCcc
Q 003853 117 MIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTT-RAMCFCGEGTK 195 (791)
Q Consensus 117 ~~~~~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~-~g~C~C~~G~~ 195 (791)
.|....|..+|.+ |+|+. .++|.|++||+|..|+.. .|.. .|.+...|. .+.|.|.+||+
T Consensus 389 ~c~~~~C~~~C~n-G~C~~-~~~C~C~~G~~G~~C~~~---~C~~--------------~C~~~g~C~~~~~C~C~~G~~ 449 (463)
T 2wg3_C 389 QTLTSECSRLCRN-GYCTP-TGKCCCSPGWEGDFCRTA---KCEP--------------ACRHGGVCVRPNKCLCKKGYL 449 (463)
T ss_dssp CCCCCHHHHHCCS-EEECT-TSCEEECTTEESTTSCEE---CC-------------------------------------
T ss_pred CCccccccCCCCC-CccCC-CCeECCCCCcCCCcCCcC---cCCC--------------CCCCCCEECCCCEEECCCCcc
Confidence 3444567567986 99985 689999999999999864 3442 354332232 26899999999
Q ss_pred cCCCCCC
Q 003853 196 YPNRPVA 202 (791)
Q Consensus 196 G~~c~~~ 202 (791)
|..|+..
T Consensus 450 G~~C~~~ 456 (463)
T 2wg3_C 450 GPQCEQV 456 (463)
T ss_dssp -------
T ss_pred cCCCCCC
Confidence 9888654
No 35
>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*
Probab=97.70 E-value=2.1e-05 Score=91.47 Aligned_cols=63 Identities=22% Similarity=0.490 Sum_probs=46.1
Q ss_pred CCCCc---cccCCcchhhcccccccCccc-cCCCCCCCccccc-------------ccccCcC---CCCCCCceec--C-
Q 003853 236 GSKPG---WCNVDPEEAYALKVQFKEECD-CKYDGLLGQFCEV-------------PVSSTCV---NQCSGHGHCR--G- 292 (791)
Q Consensus 236 C~~~G---~C~~~~~~~~~~~~c~~g~C~-C~~~G~~G~~Ce~-------------~~~~~C~---~~Cs~~G~C~--~- 292 (791)
|.+++ .|..... .++|. |+ +||+|..|+. .....|. ++|.++++|+ .
T Consensus 54 C~~gg~~~~CvNt~g---------sY~C~~C~-~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~ 123 (634)
T 1yo8_A 54 CFSTSKVPRCVNTQP---------GFHCLPCP-PRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGH 123 (634)
T ss_dssp SCCCSSSCCEEECSS---------SEEECCCC-TTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCT
T ss_pred ccCCccccceeeccC---------ceecccCC-CCcccCccccccccccccCCCcccccccccCCCcccccCcccccccc
Confidence 77777 7865432 57898 99 9999998761 1123554 4799999996 2
Q ss_pred -----CeeecCCCccc--CCCCC
Q 003853 293 -----GFCQCDSGWYG--VDCSI 308 (791)
Q Consensus 293 -----G~C~C~~G~~G--~~C~~ 308 (791)
..|.|++||.| ..|+.
T Consensus 124 ~~~GsY~C~C~~Gy~GdG~~Ce~ 146 (634)
T 1yo8_A 124 FSDPMYKCECQTGYAGDGLICGE 146 (634)
T ss_dssp TCSSSEEEEECTTEEESSSSEEE
T ss_pred ccccceeeeccCCccccCccccc
Confidence 28999999999 67863
No 36
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.67 E-value=2.7e-05 Score=74.10 Aligned_cols=62 Identities=29% Similarity=0.870 Sum_probs=46.2
Q ss_pred CCC-CCCCCCCCEEecCCC--eeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCCC-CCCC--CeeeeCCCc
Q 003853 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHC-DTTR--AMCFCGEGT 194 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C-~~~~--g~C~C~~G~ 194 (791)
++| +++|.++|+|+...| .|.|++||+|..|+.. .+|.... ..|...| .... ..|.|++||
T Consensus 49 deC~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~--deC~~~~-----------~~C~~~C~~n~~g~y~C~C~~Gy 115 (146)
T 1x7a_L 49 DQCEPNPCLNGGLCKDDINSYECWCQVGFEGKNCELD--ATCNIKN-----------GRCKQFCKTGADSKVLCSCTTGY 115 (146)
T ss_dssp -CCSSCSSCTTCEEEECSSCEEEECCSSEESTTTCEE--CCTTSGG-----------GSCSSBCCCCSSSCCCCBCCTTE
T ss_pred CcCCCCCCCCCCEeECCCCCEEEecCCCCcCCcCCCC--ccccCCC-----------CCCcCCCCCCCCCCEEeEcCCCc
Confidence 677 678999999987665 7999999999999875 5676421 1355566 4443 489999999
Q ss_pred c
Q 003853 195 K 195 (791)
Q Consensus 195 ~ 195 (791)
+
T Consensus 116 ~ 116 (146)
T 1x7a_L 116 R 116 (146)
T ss_dssp E
T ss_pred E
Confidence 8
No 37
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.64 E-value=2.6e-05 Score=61.19 Aligned_cols=43 Identities=21% Similarity=0.422 Sum_probs=34.5
Q ss_pred CcccccccccCcCCCCCCCceec---------CCeeecCCCcccCCCCCccc
Q 003853 269 GQFCEVPVSSTCVNQCSGHGHCR---------GGFCQCDSGWYGVDCSIPSV 311 (791)
Q Consensus 269 G~~Ce~~~~~~C~~~Cs~~G~C~---------~G~C~C~~G~~G~~C~~~~~ 311 (791)
|..|++.++++-.++|.|+|+|. ...|.|++||+|..|+..+.
T Consensus 1 G~~c~~~~~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~v~ 52 (55)
T 3u7u_G 1 GTSHLVKCAEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNYVM 52 (55)
T ss_dssp --CCEEECCSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEECC
T ss_pred CCCCcccCCCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCccCc
Confidence 67788887666678999999993 34899999999999998653
No 38
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=97.56 E-value=1e-05 Score=74.07 Aligned_cols=99 Identities=26% Similarity=0.498 Sum_probs=59.5
Q ss_pred CCC-CCCCCCCCEEecC-CC--eeeeCCCCcCCCCCccc-cCCCCCCCCCCCCCCCcccccCCCCCCCC-CCeeeeCCCc
Q 003853 121 KSC-KSDCSGQGVCNHE-LG--QCRCFHGFRGKGCSERI-HFQCNFPKTPELPYGRWVVSICPTHCDTT-RAMCFCGEGT 194 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~-~G--~C~C~~G~~G~~Ce~~~-~~~C~~~~~~~~~~g~~~~~~C~g~C~~~-~g~C~C~~G~ 194 (791)
++| +++|.+ +|... .| +|.|++||+|..++... ..+|.. ..|.+.|... ...|.|++||
T Consensus 5 deC~~~pC~~--~C~~~~~g~y~C~C~~Gy~g~~~~~~~C~~~C~~-------------~~C~~~C~~~~~y~C~C~~Gy 69 (118)
T 1dx5_I 5 DPCFRANCEY--QCQPLDQTSYLCVCAEGFAPIPHEPHRCQMFCNQ-------------TACPADCDPNTQASCECPEGY 69 (118)
T ss_dssp CGGGGCCCSS--EEEECSSSCEEEECCTTEEEETTEEEEEEECCCS-------------SEEECEECTTSTTCEECCTTE
T ss_pred ccCCCCCCCC--CCCCCCCCCEEeECCCCccccCCCCCccccccCC-------------CCCCCcccCCCCeEeECCCCc
Confidence 566 567873 99875 44 79999999999764321 112322 1344445443 3489999999
Q ss_pred c---cCCCCCCCcCCCcccCCCCCCCCCCCCCcccCcCcccCCCCCCCccccCCcchhhcccccccCccccCCCCCCCcc
Q 003853 195 K---YPNRPVAEACGFQVNLPSQPGAPKSTDWAKADLDNIFTTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQF 271 (791)
Q Consensus 195 ~---G~~c~~~~~C~~~~~~~~~~~~~c~~gw~g~~c~~~~~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~ 271 (791)
+ |..|...+.| .. ...| ++.|.+..+ .++|.|+ +||+|..
T Consensus 70 ~~~~g~~C~dideC-----------------------~~--~~~C--~~~C~n~~g---------~y~C~C~-~G~~g~~ 112 (118)
T 1dx5_I 70 ILDDGFICTDIDEC-----------------------EN--GGFC--SGVCHNLPG---------TFECICG-PDSALAG 112 (118)
T ss_dssp EEETTTEEEECCHH-----------------------HH--CSSC--SSEEEECSS---------SEEEEEC-SSSSCEE
T ss_pred cCCCCCcccccccc-----------------------CC--CCCC--cCeEEeCCC---------CEEEECC-CCCccCC
Confidence 8 4444211111 10 1445 567865432 5789998 9999854
No 39
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.52 E-value=5e-05 Score=74.11 Aligned_cols=38 Identities=29% Similarity=0.756 Sum_probs=34.0
Q ss_pred CcccCCCCCCCCCCCCEEecCCCeeeeCCCCcCCCCCcc
Q 003853 116 EMIGGKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSER 154 (791)
Q Consensus 116 ~~~~~~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~ 154 (791)
..|....|++.|+|+|.|+. .++|.|++||+|..|+..
T Consensus 144 K~C~~~~C~~~C~ngG~Cv~-P~~C~C~~Gw~G~~C~~~ 181 (188)
T 2ygo_A 144 KTCQQAECPGGCRNGGFCNE-RRICECPDGFHGPHCEGT 181 (188)
T ss_dssp EEECCCCCTTCCCTTCEECT-TSCEECCTTCBTTTTCBC
T ss_pred ccccCCccCCCCCCCCEeCC-CCcccCcCCCCCCCCcCC
Confidence 35667889999999999996 999999999999999974
No 40
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.50 E-value=1.1e-05 Score=80.31 Aligned_cols=64 Identities=33% Similarity=0.877 Sum_probs=17.5
Q ss_pred CCC-CCCCCCCCEEecCCC--eeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCCCC--eeeeCCCcc
Q 003853 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGTK 195 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~~G~~ 195 (791)
++| +++|.++|+|....| .|.|++||+|..|+..+..+|.... ..|...|....| .|.|++||+
T Consensus 43 deC~~~pC~ngg~C~n~~g~y~C~C~~Gf~G~~Ce~~i~deC~~~~-----------~~C~~~C~n~~gsy~C~C~~Gy~ 111 (195)
T 1nfu_B 43 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDN-----------GDCDQFCHEEQNSVVCSCARGYT 111 (195)
T ss_dssp --------------------------------------CCGGGTGG-----------GGCSSEEEEETTEEEEECCTTEE
T ss_pred cccCCCCCCCCCEeECCCCCeeEeCCCCceeccccccccccccCCC-----------CCCCCEeECCCCCeEEECCCCce
Confidence 677 678999999986555 7999999999999874324565421 135555654443 799999998
No 41
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=97.49 E-value=2.2e-05 Score=91.19 Aligned_cols=50 Identities=32% Similarity=0.741 Sum_probs=44.9
Q ss_pred cccCCCCCCCcccccccccCcCCCCCCCceecCCeeecCCCcccCCCCCcccc
Q 003853 260 CDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVM 312 (791)
Q Consensus 260 C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~~G~C~C~~G~~G~~C~~~~~~ 312 (791)
..|. +||+|++|.+ +..|+..|++||.|+.|.|+|.+||.|.+|+.+.+.
T Consensus 520 ~~C~-~gw~g~dc~i--~~~Cp~~C~ghG~C~~G~C~Cd~G~~G~~C~~~~~~ 569 (725)
T 2e26_A 520 FDKQ-QTWAIDNVYI--GDGCLDMCSGHGRCVQGSCVCDEQWGGLYCDEPETS 569 (725)
T ss_dssp CCTT-CCEEEEEEEE--ESCSSGGGGGSEEEETTEEEECTTEESTTSCEESSC
T ss_pred CccC-CCcccccccc--cCCCCcccCCCcEECCCCEeeCCCccCCCcCccCCC
Confidence 5798 9999999994 248999999999999999999999999999987654
No 42
>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}
Probab=97.43 E-value=7.9e-05 Score=58.44 Aligned_cols=34 Identities=26% Similarity=0.599 Sum_probs=28.2
Q ss_pred CCC-CCCCCCCCEEec-----C-CC-eeeeCCCCcCCCCCcc
Q 003853 121 KSC-KSDCSGQGVCNH-----E-LG-QCRCFHGFRGKGCSER 154 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~-----~-~G-~C~C~~G~~G~~Ce~~ 154 (791)
++| +++|.|+|+|.. . .+ +|.|++||+|..||..
T Consensus 9 ~eC~s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE~~ 50 (55)
T 3u7u_G 9 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQNY 50 (55)
T ss_dssp CSTTTTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSCEE
T ss_pred CCCcCCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcCcc
Confidence 788 789999999942 1 22 7999999999999985
No 43
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=97.37 E-value=0.00015 Score=52.47 Aligned_cols=33 Identities=33% Similarity=0.987 Sum_probs=28.2
Q ss_pred CCC-CCCCCCCCEEecCCC--eeeeCCCCcCCCCCc
Q 003853 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSE 153 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~ 153 (791)
++| +++|.++|+|....| .|.|++||+|..|+.
T Consensus 4 d~C~~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 4 DQCESNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp CTTTTCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred ccCCCCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 567 678999999986556 799999999999973
No 44
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.36 E-value=2.2e-05 Score=73.67 Aligned_cols=64 Identities=33% Similarity=0.877 Sum_probs=17.1
Q ss_pred CCC-CCCCCCCCEEecCCC--eeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCCCC--eeeeCCCcc
Q 003853 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEGTK 195 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~~G~~ 195 (791)
++| +++|.++|+|....| .|.|++||+|..|+..+..+|.... ..|.+.|....+ .|.|++||+
T Consensus 43 d~C~~~pC~n~g~C~~~~~~y~C~C~~G~~G~~C~~~i~d~C~~~~-----------~~C~~~C~~~~g~y~C~C~~Gy~ 111 (134)
T 2vh0_B 43 DQCETSPCQNQGKCKDGLGEYTCTCLEGFEGKNCELFTRKLCSLDN-----------GDCDQFCHEEQNSVVCSCARGYT 111 (134)
T ss_dssp --------------------------------------CCGGGTGG-----------GGCSSEEEEETTEEEEECCTTEE
T ss_pred CcCCCCCCCCcCCcccCCCCEEeeCCCCccCCccccCCCCccccCC-----------CCCCCEeECCCCCEEEECCCCcE
Confidence 677 678999999986555 7999999999999974324565311 135555554443 899999998
No 45
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.33 E-value=0.00011 Score=69.57 Aligned_cols=71 Identities=25% Similarity=0.538 Sum_probs=47.1
Q ss_pred CCCC-CCCCCCCCEEecCCC--eeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCCC---CeeeeCCC
Q 003853 120 GKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTR---AMCFCGEG 193 (791)
Q Consensus 120 ~~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~---g~C~C~~G 193 (791)
.++| +++|.++|+|+...| .|.|++||+|..|+..+ .+|.... +....|...|.... ..|.|++|
T Consensus 47 id~C~~~pC~n~g~C~~~~g~y~C~C~~G~~G~~C~~~~-~~c~~c~--------~~~~~C~~~C~~~~g~~y~C~C~~G 117 (142)
T 2c4f_L 47 GDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRNCETHK-DDQLICV--------NENGGCEQYCSDHTGTKRSCRCHEG 117 (142)
T ss_dssp CCGGGGCCCCTTCEEEEETTEEEEECCTTEESTTSCEEG-GGCCSTT--------TGGGGCSSEEECCTTSCCEEECCTT
T ss_pred cCcCcCCCcCCCCEEeCCCCCEEeeCCCCccCCccccCc-ccccccc--------CCCCCccCEeECCCCCCEEEECCCC
Confidence 3677 678999999987666 79999999999999732 2221100 00112444555443 48999999
Q ss_pred cc----cCCC
Q 003853 194 TK----YPNR 199 (791)
Q Consensus 194 ~~----G~~c 199 (791)
|+ |..|
T Consensus 118 y~l~~dG~~C 127 (142)
T 2c4f_L 118 YSLLADGVSC 127 (142)
T ss_dssp EEECTTSSCE
T ss_pred ceECCCCCCC
Confidence 98 5555
No 46
>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...
Probab=97.31 E-value=6.1e-05 Score=71.26 Aligned_cols=67 Identities=22% Similarity=0.510 Sum_probs=48.1
Q ss_pred CCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccccCcCCCCCCCc---eec-----CCeeecCCCcc--
Q 003853 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVNQCSGHG---HCR-----GGFCQCDSGWY-- 302 (791)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G---~C~-----~G~C~C~~G~~-- 302 (791)
..+|.++|.|....+ .+.|.|+ +||+|..|+..+...-...|.+++ +|+ ...|.|++||.
T Consensus 52 ~~pC~n~g~C~~~~g---------~y~C~C~-~G~~G~~C~~~~~~c~~c~~~~~~C~~~C~~~~g~~y~C~C~~Gy~l~ 121 (142)
T 2c4f_L 52 SSPCQNGGSCKDQLQ---------SYICFCL-PAFEGRNCETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSLL 121 (142)
T ss_dssp GCCCCTTCEEEEETT---------EEEEECC-TTEESTTSCEEGGGCCSTTTGGGGCSSEEECCTTSCCEEECCTTEEEC
T ss_pred CCCcCCCCEEeCCCC---------CEEeeCC-CCccCCccccCccccccccCCCCCccCEeECCCCCCEEEECCCCceEC
Confidence 567889999965322 4699999 999999999743333122344555 786 34899999999
Q ss_pred --cCCCCCc
Q 003853 303 --GVDCSIP 309 (791)
Q Consensus 303 --G~~C~~~ 309 (791)
|..|+..
T Consensus 122 ~dG~~C~~~ 130 (142)
T 2c4f_L 122 ADGVSCTPT 130 (142)
T ss_dssp TTSSCEEES
T ss_pred CCCCCCCCC
Confidence 8888753
No 47
>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*
Probab=97.28 E-value=0.00011 Score=71.67 Aligned_cols=40 Identities=25% Similarity=0.715 Sum_probs=32.8
Q ss_pred CcccccccccCcCCCCCCCceec-CCeeecCCCcccCCCCCccc
Q 003853 269 GQFCEVPVSSTCVNQCSGHGHCR-GGFCQCDSGWYGVDCSIPSV 311 (791)
Q Consensus 269 G~~Ce~~~~~~C~~~Cs~~G~C~-~G~C~C~~G~~G~~C~~~~~ 311 (791)
.+.|..+ .|.+.|+|+|.|+ .+.|.|++||.|.+|++..+
T Consensus 143 ~K~C~~~---~C~~~C~ngG~Cv~P~~C~C~~Gw~G~~C~~~~~ 183 (188)
T 2ygo_A 143 FKTCQQA---ECPGGCRNGGFCNERRICECPDGFHGPHCEGTKH 183 (188)
T ss_dssp EEEECCC---CCTTCCCTTCEECTTSCEECCTTCBTTTTCBC--
T ss_pred cccccCC---ccCCCCCCCCEeCCCCcccCcCCCCCCCCcCCcc
Confidence 4455544 7889999999998 78999999999999998754
No 48
>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*
Probab=97.27 E-value=4.9e-05 Score=75.72 Aligned_cols=65 Identities=26% Similarity=0.656 Sum_probs=22.2
Q ss_pred CCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccccCcCC---CCCCCceec----CCeeecCCCcc---
Q 003853 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVN---QCSGHGHCR----GGFCQCDSGWY--- 302 (791)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~---~Cs~~G~C~----~G~C~C~~G~~--- 302 (791)
..+|.++|.|....+ .+.|.|+ +||+|..|+..+...|.. .|.+ +|. ...|.|++||.
T Consensus 47 ~~pC~ngg~C~n~~g---------~y~C~C~-~Gf~G~~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~C~~Gy~l~~ 114 (195)
T 1nfu_B 47 TSPCQNQGKCKDGLG---------EYTCTCL-EGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD 114 (195)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred CCCCCCCCEeECCCC---------CeeEeCC-CCceeccccccccccccCCCCCCCC--EeECCCCCeEEECCCCceeCC
Confidence 567888899975432 5799999 999999998754234542 5765 886 34899999999
Q ss_pred -cCCCCCc
Q 003853 303 -GVDCSIP 309 (791)
Q Consensus 303 -G~~C~~~ 309 (791)
|..|+..
T Consensus 115 dG~~C~~~ 122 (195)
T 1nfu_B 115 NGKACIPT 122 (195)
T ss_dssp TSSCEEES
T ss_pred CCCccccC
Confidence 8999764
No 49
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=97.26 E-value=8.7e-05 Score=77.94 Aligned_cols=52 Identities=35% Similarity=0.819 Sum_probs=41.5
Q ss_pred ccCccccCCCCCCCccccccccc--------CcCC-----CCCCCceecCCeeecCCCc------ccCCCCC
Q 003853 256 FKEECDCKYDGLLGQFCEVPVSS--------TCVN-----QCSGHGHCRGGFCQCDSGW------YGVDCSI 308 (791)
Q Consensus 256 ~~g~C~C~~~G~~G~~Ce~~~~~--------~C~~-----~Cs~~G~C~~G~C~C~~G~------~G~~C~~ 308 (791)
.-|.|.|. +||+|..|+..... .|.. .|+|+|+|+-|.|.|..+| +|..|+.
T Consensus 205 ~CG~C~C~-~g~~G~~CeC~~~~~~~~~~~~~C~~~~~~~~CSgrG~C~CG~C~C~~~~~~~~~~~G~~~~~ 275 (280)
T 2p26_A 205 ECGICRCD-TGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCEH 275 (280)
T ss_dssp ETTEEEEC-TTEESTTSCEECTTSCHHHHHHTTCSSTTSCGGGGSEEEETTEEEECCCSSTTCEEESTTSCE
T ss_pred CCCceeCC-CCCcCCcceecCCccccccccccCCCCCCCCccCCCceEeCCeeECcCCCCCCeeEeeEeccc
Confidence 36899998 99999999865332 5752 4999999999999998886 6666664
No 50
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=97.21 E-value=0.00015 Score=79.42 Aligned_cols=28 Identities=25% Similarity=0.614 Sum_probs=20.7
Q ss_pred CCCCCCEEe-c---CCCeeeeCCCCcCCCCCc
Q 003853 126 DCSGQGVCN-H---ELGQCRCFHGFRGKGCSE 153 (791)
Q Consensus 126 ~Cs~~G~C~-~---~~G~C~C~~G~~G~~Ce~ 153 (791)
.|++||.+. . ..+.|.|.+||+|.+|+.
T Consensus 256 ~Cngh~s~c~~~~~~~~~C~C~~nt~G~~Ce~ 287 (375)
T 4aqt_A 256 KCNGHASECVKNEFDKLMCNCKHNTYGVDCEK 287 (375)
T ss_dssp CCTTSCSCEEECTTSCEEECCCTTEESTTSCE
T ss_pred cCCCCCcccCCCCCCCeeeeCcCCCcCCCccc
Confidence 488887542 1 223689999999999997
No 51
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.20 E-value=0.00021 Score=76.65 Aligned_cols=66 Identities=26% Similarity=0.733 Sum_probs=47.7
Q ss_pred CCCC-CCCCCCCCEEecCCC--eeeeCCCCcCCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCCC--CeeeeCCCc
Q 003853 120 GKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTR--AMCFCGEGT 194 (791)
Q Consensus 120 ~~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~--g~C~C~~G~ 194 (791)
.++| +++|.++|+|....+ .|.|++||+|..|+.. ..+|..... ..|.+.|.... ..|.|++||
T Consensus 5 ~~~C~~~pC~~~g~C~~~~~~~~C~C~~g~~g~~C~~~-~~eC~~~~~----------~~C~~~C~~~~g~~~C~C~~g~ 73 (317)
T 3h5c_B 5 GSPCISQPCLHNGSCQDSIWGYTCTCSPGYEGSNCELA-KNECHPERT----------DGCQHFCLPGQESYTCSCAQGY 73 (317)
T ss_dssp -CCTTSCCCTTTCCCCCCSSSCCCCCSSSCCSSSSCCC-SSSCCTTCT----------TSCSSEEECCSSSCEEECCTTE
T ss_pred CCcCCCCCCCCCCEeECCCCCeEEECCCCCcCCccccC-cccCCCCCC----------CCCcCccccCCCeeEEeccccc
Confidence 3678 678999999975444 7999999999999854 457764210 24656665553 389999999
Q ss_pred cc
Q 003853 195 KY 196 (791)
Q Consensus 195 ~G 196 (791)
.|
T Consensus 74 ~~ 75 (317)
T 3h5c_B 74 RL 75 (317)
T ss_dssp EC
T ss_pred cc
Confidence 86
No 52
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=97.18 E-value=0.00028 Score=77.69 Aligned_cols=28 Identities=32% Similarity=0.763 Sum_probs=23.1
Q ss_pred CCCCCCE-EecC------CCeeeeCCCCcCCCCCc
Q 003853 126 DCSGQGV-CNHE------LGQCRCFHGFRGKGCSE 153 (791)
Q Consensus 126 ~Cs~~G~-C~~~------~G~C~C~~G~~G~~Ce~ 153 (791)
.|+||+. |+.. .|+|.|..+++|.+|+.
T Consensus 267 ~CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CEr 301 (403)
T 2y38_A 267 VCHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDR 301 (403)
T ss_dssp CCTTBCSCEEESCTTSTTCEEECCCTTEESSSCCE
T ss_pred ccCCCccccCCCCCCCccceEeECcCcCcCCCCCC
Confidence 5999986 9743 36799999999999996
No 53
>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*
Probab=97.10 E-value=0.00017 Score=68.56 Aligned_cols=63 Identities=29% Similarity=0.684 Sum_probs=47.7
Q ss_pred CCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccccCcCC---CCCCCcee-c----CCeeecCCCcc--
Q 003853 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVN---QCSGHGHC-R----GGFCQCDSGWY-- 302 (791)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~---~Cs~~G~C-~----~G~C~C~~G~~-- 302 (791)
..+|.++|.|....+ .+.|.|+ +||+|..|+.. +.|.. .|.+ +| . ...|.|++||.
T Consensus 53 ~~pC~n~g~C~~~~~---------~y~C~C~-~G~~G~~C~~~--deC~~~~~~C~~--~C~~n~~g~y~C~C~~Gy~l~ 118 (146)
T 1x7a_L 53 PNPCLNGGLCKDDIN---------SYECWCQ-VGFEGKNCELD--ATCNIKNGRCKQ--FCKTGADSKVLCSCTTGYRLA 118 (146)
T ss_dssp SCSSCTTCEEEECSS---------CEEEECC-SSEESTTTCEE--CCTTSGGGSCSS--BCCCCSSSCCCCBCCTTEEEC
T ss_pred CCCCCCCCEeECCCC---------CEEEecC-CCCcCCcCCCC--ccccCCCCCCcC--CCCCCCCCCEEeEcCCCcEeC
Confidence 567888899965432 5799999 99999999875 34542 4654 78 5 45899999999
Q ss_pred --cCCCCCc
Q 003853 303 --GVDCSIP 309 (791)
Q Consensus 303 --G~~C~~~ 309 (791)
|..|+..
T Consensus 119 ~dG~~C~~~ 127 (146)
T 1x7a_L 119 PDQKSCKPA 127 (146)
T ss_dssp TTSSSEEEC
T ss_pred CCCCcCCCC
Confidence 8888753
No 54
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=97.09 E-value=0.0005 Score=73.60 Aligned_cols=60 Identities=23% Similarity=0.535 Sum_probs=46.3
Q ss_pred CCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccccCcC----CCCCCCceec----CCeeecCCCcccC
Q 003853 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCV----NQCSGHGHCR----GGFCQCDSGWYGV 304 (791)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C~----~~Cs~~G~C~----~G~C~C~~G~~G~ 304 (791)
.++|.++|.|..... .+.|.|+ +||+|..|+..++ .|. ++|.+ .|. ...|.|.+||.|.
T Consensus 10 ~~pC~~~g~C~~~~~---------~~~C~C~-~g~~g~~C~~~~~-eC~~~~~~~C~~--~C~~~~g~~~C~C~~g~~~~ 76 (317)
T 3h5c_B 10 SQPCLHNGSCQDSIW---------GYTCTCS-PGYEGSNCELAKN-ECHPERTDGCQH--FCLPGQESYTCSCAQGYRLG 76 (317)
T ss_dssp SCCCTTTCCCCCCSS---------SCCCCCS-SSCCSSSSCCCSS-SCCTTCTTSCSS--EEECCSSSCEEECCTTEECC
T ss_pred CCCCCCCCEeECCCC---------CeEEECC-CCCcCCccccCcc-cCCCCCCCCCcC--ccccCCCeeEEecccccccc
Confidence 567889999975432 5799999 9999999986543 443 57876 897 3499999999985
Q ss_pred C
Q 003853 305 D 305 (791)
Q Consensus 305 ~ 305 (791)
.
T Consensus 77 ~ 77 (317)
T 3h5c_B 77 E 77 (317)
T ss_dssp T
T ss_pred c
Confidence 4
No 55
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=97.08 E-value=0.0006 Score=52.96 Aligned_cols=35 Identities=37% Similarity=0.897 Sum_probs=28.0
Q ss_pred CCCCC----CCCCCCEEe--cCCC--eeeeCCCCcCCCCCccc
Q 003853 121 KSCKS----DCSGQGVCN--HELG--QCRCFHGFRGKGCSERI 155 (791)
Q Consensus 121 ~~C~~----~Cs~~G~C~--~~~G--~C~C~~G~~G~~Ce~~~ 155 (791)
.+|.. +|.++|+|. ...+ .|.|++||+|..|+..+
T Consensus 4 ~~C~~~~~~pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 46 (53)
T 1egf_A 4 PGCPSSYDGYCLNGGVCMHIESLDSYTCNCVIGYSGDRCQTRD 46 (53)
T ss_dssp CCCCTTSSCSSCSSCEEEEESSSSCEEEECCTTCCSSSSCCCS
T ss_pred ccCCCCCCCcCCCCcEEEeeCCCCCEEEECCCCCcCCcCCccC
Confidence 56733 799999998 4334 79999999999999863
No 56
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=97.06 E-value=0.00038 Score=52.12 Aligned_cols=29 Identities=34% Similarity=0.843 Sum_probs=24.4
Q ss_pred CCCCCCEEe--cCCC--eeeeCCCCcCCCCCcc
Q 003853 126 DCSGQGVCN--HELG--QCRCFHGFRGKGCSER 154 (791)
Q Consensus 126 ~Cs~~G~C~--~~~G--~C~C~~G~~G~~Ce~~ 154 (791)
+|.++|+|. ...+ .|.|++||+|..|+..
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~ 42 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTR 42 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEE
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCcc
Confidence 799999997 2233 7999999999999975
No 57
>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...
Probab=97.05 E-value=0.00011 Score=68.79 Aligned_cols=65 Identities=26% Similarity=0.656 Sum_probs=21.3
Q ss_pred CCCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccccCcCC---CCCCCceec----CCeeecCCCcc---
Q 003853 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTCVN---QCSGHGHCR----GGFCQCDSGWY--- 302 (791)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C~~---~Cs~~G~C~----~G~C~C~~G~~--- 302 (791)
..+|.++|.|..... .+.|.|+ +||+|..|+..+.+.|.. .|.+ +|. ...|.|++||.
T Consensus 47 ~~pC~n~g~C~~~~~---------~y~C~C~-~G~~G~~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~C~~Gy~l~~ 114 (134)
T 2vh0_B 47 TSPCQNQGKCKDGLG---------EYTCTCL-EGFEGKNCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCSCARGYTLAD 114 (134)
T ss_dssp --------------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEECCTTEEECT
T ss_pred CCCCCCcCCcccCCC---------CEEeeCC-CCccCCccccCCCCccccCCCCCCC--EeECCCCCEEEECCCCcEECC
Confidence 566888899965432 5799999 999999999754234542 4654 886 34899999999
Q ss_pred -cCCCCCc
Q 003853 303 -GVDCSIP 309 (791)
Q Consensus 303 -G~~C~~~ 309 (791)
|..|+..
T Consensus 115 ~g~~C~~~ 122 (134)
T 2vh0_B 115 NGKACIPT 122 (134)
T ss_dssp TSSCEEES
T ss_pred CCCccCcC
Confidence 8888653
No 58
>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=96.99 E-value=0.00025 Score=78.30 Aligned_cols=43 Identities=19% Similarity=0.532 Sum_probs=0.0
Q ss_pred CCCCcccccccccCcCCCCCCCceec-CCeeecCCCcccCCCCCccccc
Q 003853 266 GLLGQFCEVPVSSTCVNQCSGHGHCR-GGFCQCDSGWYGVDCSIPSVMS 313 (791)
Q Consensus 266 G~~G~~Ce~~~~~~C~~~Cs~~G~C~-~G~C~C~~G~~G~~C~~~~~~~ 313 (791)
++.|..|+.. ..+|.++|+|. ...|.|++||+|..|+...|..
T Consensus 360 n~~g~~CD~~-----t~~C~ngg~C~~~~~C~C~~G~~G~~Ce~c~C~~ 403 (426)
T 3zyj_B 360 SIGTNVCDNE-----LLHCQNGGTCHNNVRCLCPAAYTGILCEKLRCEE 403 (426)
T ss_dssp -------------------------------------------------
T ss_pred CCCcCccccC-----cccCCCCCCcCCCCCCcCCCCCcCCCCcCCCCCC
Confidence 4568889754 25899999997 4499999999999999877653
No 59
>2p26_A Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 1.75A {Homo sapiens} PDB: 1yuk_B* 1yuk_A* 2p28_A*
Probab=96.98 E-value=0.00028 Score=74.06 Aligned_cols=59 Identities=29% Similarity=0.633 Sum_probs=45.4
Q ss_pred CCCCCEEecCCCeeeeCCCCcCCCCCccccC--------CCCCCCCCCCCCCCcccccCCCCCCCCCCeeeeCCCccc
Q 003853 127 CSGQGVCNHELGQCRCFHGFRGKGCSERIHF--------QCNFPKTPELPYGRWVVSICPTHCDTTRAMCFCGEGTKY 196 (791)
Q Consensus 127 Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~~~~--------~C~~~~~~~~~~g~~~~~~C~g~C~~~~g~C~C~~G~~G 196 (791)
|+|+|+|. .|.|.|.+||+|+.|+-.... .|.... ....|+|.++|..|+|.|..++.+
T Consensus 198 C~g~G~~~--CG~C~C~~g~~G~~CeC~~~~~~~~~~~~~C~~~~---------~~~~CSgrG~C~CG~C~C~~~~~~ 264 (280)
T 2p26_A 198 CHGKGFLE--CGICRCDTGYIGKNCECQTQGRSSQELEGSCRKDN---------NSIICSGLGDCVCGQCLCHTSDVP 264 (280)
T ss_dssp GGGSEEEE--TTEEEECTTEESTTSCEECTTSCHHHHHHTTCSST---------TSCGGGGSEEEETTEEEECCCSST
T ss_pred cCCCCeEC--CCceeCCCCCcCCcceecCCccccccccccCCCCC---------CCCccCCCceEeCCeeECcCCCCC
Confidence 89999999 999999999999999854211 454221 124799888888899999887653
No 60
>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A
Probab=96.96 E-value=0.00019 Score=65.67 Aligned_cols=44 Identities=25% Similarity=0.660 Sum_probs=33.7
Q ss_pred cCccccCCCCCC---CcccccccccCc-C-CCCCCCceec----CCeeecCCCcccCC
Q 003853 257 KEECDCKYDGLL---GQFCEVPVSSTC-V-NQCSGHGHCR----GGFCQCDSGWYGVD 305 (791)
Q Consensus 257 ~g~C~C~~~G~~---G~~Ce~~~~~~C-~-~~Cs~~G~C~----~G~C~C~~G~~G~~ 305 (791)
.++|.|+ +||+ |..|+.. +.| . ++| +++|+ ...|.|++||.|..
T Consensus 60 ~y~C~C~-~Gy~~~~g~~C~di--deC~~~~~C--~~~C~n~~g~y~C~C~~G~~g~~ 112 (118)
T 1dx5_I 60 QASCECP-EGYILDDGFICTDI--DECENGGFC--SGVCHNLPGTFECICGPDSALAG 112 (118)
T ss_dssp TTCEECC-TTEEEETTTEEEEC--CHHHHCSSC--SSEEEECSSSEEEEECSSSSCEE
T ss_pred CeEeECC-CCccCCCCCccccc--cccCCCCCC--cCeEEeCCCCEEEECCCCCccCC
Confidence 5799999 9999 8899532 233 2 678 68897 34899999998753
No 61
>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*
Probab=96.94 E-value=0.00048 Score=62.48 Aligned_cols=61 Identities=30% Similarity=0.563 Sum_probs=42.7
Q ss_pred CCCCCCccccCCcchhhcccccccCccccCCCCCCCcccccccc-cCcCC---CCCCCceec----CCeeecCCCcccCC
Q 003853 234 TNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVS-STCVN---QCSGHGHCR----GGFCQCDSGWYGVD 305 (791)
Q Consensus 234 ~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~-~~C~~---~Cs~~G~C~----~G~C~C~~G~~G~~ 305 (791)
..|.++|.|....+ .++|.|+ +||+|..|+..++ ..|.. .|.. +|+ ...|.|++||.|..
T Consensus 20 ~~C~~~g~C~~~~~---------~y~C~C~-~G~~G~~C~~~~~~~~C~~~~~~C~~--~C~n~~g~y~C~C~~G~~~~~ 87 (114)
T 1aut_L 20 SLCCGHGTCIDGIG---------SFSCDCR-SGWEGRFCQREVSFLNCSLDNGGCTH--YCLEEVGWRRCSCAPGYKLGD 87 (114)
T ss_dssp STTTTSEEECCCSS---------CCCEEEC-TTEESTTSCEECCSSSSSSGGGGCSS--EEEECSSSEEEECCTTEEECT
T ss_pred ccCCCcCCCCCCCC---------CcEeeCC-CCCcCCCcCcCCcCCcCcCCCCCCCC--EeECCCCCEEeECCCCeeECC
Confidence 34788899975432 5799999 9999999987542 23431 2332 786 34899999999644
Q ss_pred C
Q 003853 306 C 306 (791)
Q Consensus 306 C 306 (791)
+
T Consensus 88 ~ 88 (114)
T 1aut_L 88 D 88 (114)
T ss_dssp T
T ss_pred C
Confidence 3
No 62
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.93 E-value=0.00065 Score=57.77 Aligned_cols=58 Identities=28% Similarity=0.654 Sum_probs=42.8
Q ss_pred CCCCCCccccCCcchhhcccccccCccccCCCCCC--CcccccccccCc--CCCCCCCceec----CCeeecCCCcccCC
Q 003853 234 TNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLL--GQFCEVPVSSTC--VNQCSGHGHCR----GGFCQCDSGWYGVD 305 (791)
Q Consensus 234 ~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~--G~~Ce~~~~~~C--~~~Cs~~G~C~----~G~C~C~~G~~G~~ 305 (791)
..|.+ |.|.+..+ .++|.|+ +||+ |..|+.. +.| .++|.+ |+|+ ...|.|++||.|..
T Consensus 12 ~~C~~-g~C~n~~g---------~y~C~C~-~Gy~~~g~~C~di--deC~~~~~C~~-~~C~n~~g~y~C~C~~G~~g~~ 77 (82)
T 1emn_A 12 DVCKH-GQCINTDG---------SYRCECP-FGYILAGNECVDT--DECSVGNPCGN-GTCKNVIGGFECTCEEGFEPGP 77 (82)
T ss_dssp TSCSS-SEECCCSS---------CCCEECC-TTEEEETTEEEEC--CGGGTCCTTSS-SCEEECSSSEEECCSSSSCCCS
T ss_pred CCcCC-CEEEecCC---------CEEEECC-CCeECCCCccCCc--ccccCCCCCCC-CEeECCCCCEEeECCCCeEeCC
Confidence 45654 78876433 5799999 9997 9999643 344 467875 6997 34899999999854
No 63
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.81 E-value=0.00012 Score=56.86 Aligned_cols=40 Identities=23% Similarity=0.596 Sum_probs=32.5
Q ss_pred CccccCCCCCCCcccccccccCcCCCCCCCceecC--------CeeecCCCcccCCCCCcc
Q 003853 258 EECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRG--------GFCQCDSGWYGVDCSIPS 310 (791)
Q Consensus 258 g~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~~--------G~C~C~~G~~G~~C~~~~ 310 (791)
.+|.|+ +||+ .++|.|+|+|.. ..|.|++||+|..|+...
T Consensus 3 ~~C~C~-~g~~------------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~~ 50 (52)
T 3ca7_A 3 PTYKCP-ETFD------------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50 (52)
T ss_dssp CCBCCC-HHHH------------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEEC
T ss_pred eeeECC-CCCc------------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCcccc
Confidence 468898 8876 357899999972 289999999999999753
No 64
>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A
Probab=96.69 E-value=0.00096 Score=62.84 Aligned_cols=61 Identities=20% Similarity=0.513 Sum_probs=47.2
Q ss_pred CCCCCCCccccCCcchhhcccccccCccccCCCCCCC---------cccccccccCcCC----CCCCCceec----CCee
Q 003853 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLG---------QFCEVPVSSTCVN----QCSGHGHCR----GGFC 295 (791)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G---------~~Ce~~~~~~C~~----~Cs~~G~C~----~G~C 295 (791)
...|.++|.|.. .++|.|+ +||+| ..|+.. +.|.. +|.++++|+ ...|
T Consensus 6 ~~~C~~~~~C~~------------~~~C~C~-~G~~g~~~~~~~~~~~C~di--deC~~~~~~~C~~~~~C~n~~g~y~C 70 (143)
T 2bou_A 6 ARWCPQDSSCVN------------ATACRCN-PGFSSFSEIITTPMETCDDI--NECATLSKVSCGKFSDCWNTEGSYDC 70 (143)
T ss_dssp CTTCCTTEEESS------------SSCEEEC-TTEECSSSSBCSTTCCCEEC--CGGGC----CCCTTEEEEECSSCEEE
T ss_pred cCcCCCCCEEcC------------CCEEeCC-CCCcCccccccCCCCcCCcc--ccccCCCCCCCCCCCEEEcCCCCeEe
Confidence 356888899964 4799999 99998 578532 34542 799999997 3489
Q ss_pred ecCCCcccCCCCC
Q 003853 296 QCDSGWYGVDCSI 308 (791)
Q Consensus 296 ~C~~G~~G~~C~~ 308 (791)
.|++||.|..|+.
T Consensus 71 ~C~~Gy~g~~~~~ 83 (143)
T 2bou_A 71 VCSPGYEPVSGAK 83 (143)
T ss_dssp EECTTEEETTCCS
T ss_pred ECCCCcccCcCcc
Confidence 9999999987764
No 65
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=96.65 E-value=0.00059 Score=54.99 Aligned_cols=34 Identities=32% Similarity=0.724 Sum_probs=27.8
Q ss_pred CCC-CCCCCCCCEEec-----CCC--eeeeCCCCcCCCCCcc
Q 003853 121 KSC-KSDCSGQGVCNH-----ELG--QCRCFHGFRGKGCSER 154 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~-----~~G--~C~C~~G~~G~~Ce~~ 154 (791)
++| +++|.|+|+|.. ..+ .|.|++||+|..|+..
T Consensus 7 ~~C~~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 48 (63)
T 1hae_A 7 AEKEKTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTEN 48 (63)
T ss_dssp CHHHHTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEE
T ss_pred CCCCCCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcC
Confidence 456 678999999974 222 7999999999999975
No 66
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=96.65 E-value=0.0011 Score=49.99 Aligned_cols=29 Identities=31% Similarity=0.701 Sum_probs=24.1
Q ss_pred CCCCCCCEEecCC--C--eeeeCCCCcCCCCCcc
Q 003853 125 SDCSGQGVCNHEL--G--QCRCFHGFRGKGCSER 154 (791)
Q Consensus 125 ~~Cs~~G~C~~~~--G--~C~C~~G~~G~~Ce~~ 154 (791)
++|.+ |+|.... + .|.|++||+|..||..
T Consensus 12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred CCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 68998 9997422 2 7999999999999974
No 67
>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A
Probab=96.63 E-value=0.0012 Score=56.04 Aligned_cols=62 Identities=27% Similarity=0.723 Sum_probs=43.0
Q ss_pred CCC--CCCCCCCCEEecCCC--eeeeCCCCc--CCCCCccccCCCCCCCCCCCCCCCcccccCC-CCCCCCC--CeeeeC
Q 003853 121 KSC--KSDCSGQGVCNHELG--QCRCFHGFR--GKGCSERIHFQCNFPKTPELPYGRWVVSICP-THCDTTR--AMCFCG 191 (791)
Q Consensus 121 ~~C--~~~Cs~~G~C~~~~G--~C~C~~G~~--G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~-g~C~~~~--g~C~C~ 191 (791)
++| +++|. +|+|....| +|.|++||+ |..|+. ..+|... ..|. +.|.... ..|.|+
T Consensus 6 deC~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~g~~C~d--ideC~~~------------~~C~~~~C~n~~g~y~C~C~ 70 (82)
T 1emn_A 6 DECKEPDVCK-HGQCINTDGSYRCECPFGYILAGNECVD--TDECSVG------------NPCGNGTCKNVIGGFECTCE 70 (82)
T ss_dssp CSSSSTTSCS-SSEECCCSSCCCEECCTTEEEETTEEEE--CCGGGTC------------CTTSSSCEEECSSSEEECCS
T ss_pred ccCCCCCCcC-CCEEEecCCCEEEECCCCeECCCCccCC--cccccCC------------CCCCCCEeECCCCCEEeECC
Confidence 567 36787 499987555 799999997 999964 4566531 1343 4454443 389999
Q ss_pred CCcccC
Q 003853 192 EGTKYP 197 (791)
Q Consensus 192 ~G~~G~ 197 (791)
+||+|.
T Consensus 71 ~G~~g~ 76 (82)
T 1emn_A 71 EGFEPG 76 (82)
T ss_dssp SSSCCC
T ss_pred CCeEeC
Confidence 999864
No 68
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=96.60 E-value=0.0082 Score=56.81 Aligned_cols=94 Identities=13% Similarity=0.053 Sum_probs=66.1
Q ss_pred chhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC--CH
Q 003853 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL--NE 704 (791)
Q Consensus 628 ~~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i--~~ 704 (791)
..+..+.|+.+.+.+.|.- ++++.-++|||.+|+||||.++..- ...+++.-... .++..+...|.+.|..+ .+
T Consensus 65 ~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~vPvi~~~~~~-~~~~~~~~~~~--~~~~~~~~~l~~~i~~l~~~~ 141 (166)
T 3qhp_A 65 SNELLEILKTCTLYVHAANVESEAIACLEAISVGIVPVIANSPLS-ATRQFALDERS--LFEPNNAKDLSAKIDWWLENK 141 (166)
T ss_dssp HHHHHHHHTTCSEEEECCCSCCCCHHHHHHHHTTCCEEEECCTTC-GGGGGCSSGGG--EECTTCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHhCCEEEECCcccCccHHHHHHHhcCCCcEEeeCCCC-chhhhccCCce--EEcCCCHHHHHHHHHHHHhCH
Confidence 3567899999999988774 4667789999999999999944221 12233333343 56667776665555544 67
Q ss_pred HHHHHHHHHHHHHHHhheec
Q 003853 705 TEIQFRLANVQKVWQRFLYR 724 (791)
Q Consensus 705 ~~~~~m~~~~~~~~~~~~~~ 724 (791)
+...+|.++.++..++|-|.
T Consensus 142 ~~~~~~~~~~~~~~~~~s~~ 161 (166)
T 3qhp_A 142 LERERMQNEYAKSALNYTLE 161 (166)
T ss_dssp HHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHCChh
Confidence 88889999998877888775
No 69
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=96.57 E-value=0.00097 Score=51.84 Aligned_cols=31 Identities=35% Similarity=0.879 Sum_probs=25.9
Q ss_pred CCCCCCCCEEe--cCCC--eeeeCCCCcCCCCCcc
Q 003853 124 KSDCSGQGVCN--HELG--QCRCFHGFRGKGCSER 154 (791)
Q Consensus 124 ~~~Cs~~G~C~--~~~G--~C~C~~G~~G~~Ce~~ 154 (791)
+++|.|+|+|. ...+ .|.|++||+|..|+..
T Consensus 11 ~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~ 45 (53)
T 1nql_B 11 DGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYR 45 (53)
T ss_dssp CCEECTTCEEEEETTTTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcC
Confidence 46799999997 3333 7999999999999985
No 70
>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*
Probab=96.42 E-value=0.0011 Score=77.17 Aligned_cols=42 Identities=31% Similarity=0.688 Sum_probs=36.0
Q ss_pred cccccCccc-CCCCCCCCCCCCEEecCCCeeeeCCCCcCCCCCcc
Q 003853 111 EVDLVEMIG-GKSCKSDCSGQGVCNHELGQCRCFHGFRGKGCSER 154 (791)
Q Consensus 111 ~~~~~~~~~-~~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~ 154 (791)
....+++|. +..||.+|++||.|+ .|+|+|.+||+|++|+.+
T Consensus 524 ~gw~g~dc~i~~~Cp~~C~ghG~C~--~G~C~Cd~G~~G~~C~~~ 566 (725)
T 2e26_A 524 QTWAIDNVYIGDGCLDMCSGHGRCV--QGSCVCDEQWGGLYCDEP 566 (725)
T ss_dssp CCEEEEEEEEESCSSGGGGGSEEEE--TTEEEECTTEESTTSCEE
T ss_pred CCcccccccccCCCCcccCCCcEEC--CCCEeeCCCccCCCcCcc
Confidence 344455666 689999999999999 899999999999999985
No 71
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=96.29 E-value=0.0027 Score=54.54 Aligned_cols=59 Identities=29% Similarity=0.604 Sum_probs=42.0
Q ss_pred CCCCccccCCcchhhcccccccCccccCCCCCC----CcccccccccCcCCCCCCCceec----CCeeecCCCcccCCCC
Q 003853 236 GSKPGWCNVDPEEAYALKVQFKEECDCKYDGLL----GQFCEVPVSSTCVNQCSGHGHCR----GGFCQCDSGWYGVDCS 307 (791)
Q Consensus 236 C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~----G~~Ce~~~~~~C~~~Cs~~G~C~----~G~C~C~~G~~G~~C~ 307 (791)
| +++.|...++ .++|.|+ +||+ |..|+. ++.+-.++|. ++|+ ...|.|+ |+.|..|+
T Consensus 13 C-~~~~C~n~~g---------~y~C~C~-~G~~~~~~g~~C~d-ideC~~~~C~--~~C~n~~g~y~C~C~-g~~G~~~~ 77 (87)
T 1z6c_A 13 C-GTAVCKNIPG---------DFECECP-EGYRYNLKSKSCED-IDECSENMCA--QLCVNYPGGYTCYCD-GKKGFKLA 77 (87)
T ss_dssp B-TTSSCCCBTT---------BCCCSSS-TTCEEETTTTEEEC-CCHHHHSCCS--SEECCCSSSCCEECC-SSSCCBCC
T ss_pred C-CCCEeECCCC---------CEEEECC-CCceECCCCCcCCC-cCeeCCCCCC--CEEEccCCCEEEECC-CCcCCccc
Confidence 6 6678865432 5799999 9999 889963 2222246786 6897 4589998 88887776
Q ss_pred Cc
Q 003853 308 IP 309 (791)
Q Consensus 308 ~~ 309 (791)
..
T Consensus 78 ~~ 79 (87)
T 1z6c_A 78 QD 79 (87)
T ss_dssp TT
T ss_pred CC
Confidence 53
No 72
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=96.25 E-value=0.0011 Score=52.99 Aligned_cols=34 Identities=26% Similarity=0.773 Sum_probs=28.9
Q ss_pred CCC-CCCCCCC--CEEecCCC--eeeeCCCCc-CCCCCcc
Q 003853 121 KSC-KSDCSGQ--GVCNHELG--QCRCFHGFR-GKGCSER 154 (791)
Q Consensus 121 ~~C-~~~Cs~~--G~C~~~~G--~C~C~~G~~-G~~Ce~~ 154 (791)
++| +++|.++ |+|....| .|.|++||+ |.+|+..
T Consensus 12 d~C~snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~ 51 (61)
T 2k2s_B 12 AACSSNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTGN 51 (61)
T ss_dssp CHHHHCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSSC
T ss_pred CcCcCCCCcCCCccccccCCCceEeECCCCCccCCCCCCC
Confidence 677 6789998 99986555 799999999 9999864
No 73
>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A
Probab=96.16 E-value=0.0029 Score=45.55 Aligned_cols=28 Identities=32% Similarity=0.833 Sum_probs=24.1
Q ss_pred CCCCCCCceec----CCeeecCCCcccCCCCC
Q 003853 281 VNQCSGHGHCR----GGFCQCDSGWYGVDCSI 308 (791)
Q Consensus 281 ~~~Cs~~G~C~----~G~C~C~~G~~G~~C~~ 308 (791)
.++|.++|+|+ ...|.|++||+|..|++
T Consensus 8 ~~pC~ngg~C~~~~~~~~C~C~~G~~G~~Ce~ 39 (39)
T 1edm_B 8 SNPCLNGGSCKDDINSYECWCPFGFEGKNCEL 39 (39)
T ss_dssp TCCCCTTCEEEEETTEEEEECCTTCCSTTSCC
T ss_pred CCCCCCCCEeEcCCCceEeECCCCCcCCccCC
Confidence 47899999997 33899999999999974
No 74
>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D
Probab=96.05 E-value=0.0019 Score=49.94 Aligned_cols=30 Identities=30% Similarity=0.729 Sum_probs=25.0
Q ss_pred CCCCCCCEEec----CCC--eeeeCCCCcCCCCCcc
Q 003853 125 SDCSGQGVCNH----ELG--QCRCFHGFRGKGCSER 154 (791)
Q Consensus 125 ~~Cs~~G~C~~----~~G--~C~C~~G~~G~~Ce~~ 154 (791)
++|.|+|+|.. ..+ .|.|++||+|..||..
T Consensus 14 ~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce~~ 49 (52)
T 3ca7_A 14 WYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (52)
T ss_dssp HTSCTTCEEEEEEETTEEEEEEECCTTEESTTSCEE
T ss_pred CcCCCCCEEecCccCCCCCEEEECCCCCcCCCCccc
Confidence 47999999984 123 7999999999999974
No 75
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.97 E-value=0.0046 Score=68.36 Aligned_cols=62 Identities=27% Similarity=0.674 Sum_probs=44.6
Q ss_pred CC-CCCCCCCCEEecCCC--eeeeCCCCc---CCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCCCC--eeeeCCC
Q 003853 122 SC-KSDCSGQGVCNHELG--QCRCFHGFR---GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCGEG 193 (791)
Q Consensus 122 ~C-~~~Cs~~G~C~~~~G--~C~C~~G~~---G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~~G 193 (791)
+| .++|...++|....| .|.|++||. |..|+. ..+|..+ ..|.+.|....| .|.|.+|
T Consensus 2 eC~~~~~~c~~~C~~~~~~y~C~C~~G~~~~~~~~C~d--ideC~~~------------~~C~~~C~n~~g~~~C~C~~g 67 (400)
T 3p5b_L 2 ECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCED--IDECQDP------------DTCSQLCVNLEGGYKCQCEEG 67 (400)
T ss_dssp CTTTTGGGCSSEEEECSSSEEEECCTTEEECSSSCEEE--CCCCSTT------------SSCSSCCBCCSSSCBCCCCTT
T ss_pred cccCCCCCCCCEeECCCCCeEEECCCCCCcCCCCcccC--chhhhcc------------CCCCCccCCCccceeeecccc
Confidence 56 344555679986555 799999998 888963 5678632 257777776644 8999999
Q ss_pred cccC
Q 003853 194 TKYP 197 (791)
Q Consensus 194 ~~G~ 197 (791)
|.+.
T Consensus 68 ~~~~ 71 (400)
T 3p5b_L 68 FQLD 71 (400)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9864
No 76
>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}
Probab=95.96 E-value=0.0023 Score=54.93 Aligned_cols=62 Identities=31% Similarity=0.802 Sum_probs=41.7
Q ss_pred CCC-CC--CCCCCCEEecCCC--eeeeCCCCc----CCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCCC--Ceee
Q 003853 121 KSC-KS--DCSGQGVCNHELG--QCRCFHGFR----GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTR--AMCF 189 (791)
Q Consensus 121 ~~C-~~--~Cs~~G~C~~~~G--~C~C~~G~~----G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~--g~C~ 189 (791)
++| .+ .| ++|+|....| +|.|++||+ |..|+. ..+|.. ..|.+.|.... ..|.
T Consensus 4 deC~~~~~~C-~~~~C~n~~g~y~C~C~~G~~~~~~g~~C~d--ideC~~-------------~~C~~~C~n~~g~y~C~ 67 (87)
T 1z6c_A 4 DECSLKPSIC-GTAVCKNIPGDFECECPEGYRYNLKSKSCED--IDECSE-------------NMCAQLCVNYPGGYTCY 67 (87)
T ss_dssp CSSSSSSSSB-TTSSCCCBTTBCCCSSSTTCEEETTTTEEEC--CCHHHH-------------SCCSSEECCCSSSCCEE
T ss_pred ccccCCCCCC-CCCEeECCCCCEEEECCCCceECCCCCcCCC--cCeeCC-------------CCCCCEEEccCCCEEEE
Confidence 567 23 38 7899986555 799999999 888863 355642 24656666554 3899
Q ss_pred eCCCcccCCC
Q 003853 190 CGEGTKYPNR 199 (791)
Q Consensus 190 C~~G~~G~~c 199 (791)
|+ |+.|..+
T Consensus 68 C~-g~~G~~~ 76 (87)
T 1z6c_A 68 CD-GKKGFKL 76 (87)
T ss_dssp CC-SSSCCBC
T ss_pred CC-CCcCCcc
Confidence 97 6655444
No 77
>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1
Probab=95.95 E-value=0.0036 Score=46.74 Aligned_cols=28 Identities=25% Similarity=0.542 Sum_probs=24.1
Q ss_pred CCCCCceec------CCeeecCCCcccCCCCCcc
Q 003853 283 QCSGHGHCR------GGFCQCDSGWYGVDCSIPS 310 (791)
Q Consensus 283 ~Cs~~G~C~------~G~C~C~~G~~G~~C~~~~ 310 (791)
+|.++|+|. ...|.|++||+|..|+..+
T Consensus 10 pC~ngg~C~~~~~~~~~~C~C~~G~~G~~Ce~~~ 43 (45)
T 1a3p_A 10 YCLNGGVXMHIESLDSYTCNCVIGYSGDRCQTRD 43 (45)
T ss_dssp CCSSSCEEEECTTTSSEEEECCTTEETTTTCEEC
T ss_pred CCCCCCEEEeecCCCCEEEEcCCCCcCCcCCccc
Confidence 799999995 3489999999999998753
No 78
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=95.94 E-value=0.0024 Score=57.17 Aligned_cols=63 Identities=32% Similarity=0.728 Sum_probs=22.6
Q ss_pred cCCCCC---CCCCCCCEEecCCC--eeeeCCCCcC---CCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCCCC--ee
Q 003853 119 GGKSCK---SDCSGQGVCNHELG--QCRCFHGFRG---KGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MC 188 (791)
Q Consensus 119 ~~~~C~---~~Cs~~G~C~~~~G--~C~C~~G~~G---~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C 188 (791)
..++|. ..|+ .+|....| .|.|++||+| ..|+. ..+|... ..|.+.|....+ .|
T Consensus 28 d~neC~~~~~~C~--~~C~n~~g~y~C~C~~Gy~g~~g~~C~d--ideC~~~------------~~C~~~C~n~~gsy~C 91 (107)
T 2w2n_E 28 GTNECLDNNGGCS--YVCNDLKIGYECLCPDGFQLVAQRRCED--IDECQDP------------DTCSQLCVNLEGGYKC 91 (107)
T ss_dssp SCCGGGTGGGGCS--SEEECCSBSCEEECCTTCEEETTTEEEC-------------------------------------
T ss_pred cCccCcCCCCCCC--CEeEeCCCCeEEECCCCccccCCCcccc--ccccCCC------------CCcCCeeecCCCCEEE
Confidence 345562 2353 48986444 7999999998 78873 4667531 246666766543 89
Q ss_pred eeCCCcccC
Q 003853 189 FCGEGTKYP 197 (791)
Q Consensus 189 ~C~~G~~G~ 197 (791)
.|++||.+.
T Consensus 92 ~C~~Gy~~~ 100 (107)
T 2w2n_E 92 QCEEGFQLD 100 (107)
T ss_dssp ---------
T ss_pred ECCCCceEC
Confidence 999999863
No 79
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=95.88 E-value=0.0019 Score=55.38 Aligned_cols=63 Identities=27% Similarity=0.740 Sum_probs=41.7
Q ss_pred CCC---CCCCCCCCEEecCCC--eeeeCCCCc-----CCCCCccccCCCCCCCCCCCCCCCcccccCC-CCCCCCCC--e
Q 003853 121 KSC---KSDCSGQGVCNHELG--QCRCFHGFR-----GKGCSERIHFQCNFPKTPELPYGRWVVSICP-THCDTTRA--M 187 (791)
Q Consensus 121 ~~C---~~~Cs~~G~C~~~~G--~C~C~~G~~-----G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~-g~C~~~~g--~ 187 (791)
++| +..|. +|+|....| +|.|++||+ |..|+. ..+|.... ..|. +.|....| .
T Consensus 4 deC~~~~~~C~-~g~C~n~~g~y~C~C~~Gy~~~~~~g~~C~d--ideC~~~~-----------~~C~~~~C~n~~g~y~ 69 (86)
T 1lmj_A 4 DECRISPDLCG-RGQCVNTPGDFECKCDEGYESGFMMMKNCMD--IDECQRDP-----------LLCRGGVCHNTEGSYR 69 (86)
T ss_dssp CTTTTCSSTTT-TSCEEEETTEEEECCCSSEEECTTTSSSEEE--CCHHHHCS-----------STTTTSEEEEETTEEE
T ss_pred ccccCCCCCCC-CCEEECCCCCEEeeCCCCcCccCCCCCccCC--cccccCCC-----------CcCCCCEeEcCCCCEE
Confidence 567 23485 579987666 799999998 778863 35564321 0243 34544443 8
Q ss_pred eeeCCCcccC
Q 003853 188 CFCGEGTKYP 197 (791)
Q Consensus 188 C~C~~G~~G~ 197 (791)
|.|++||++.
T Consensus 70 C~C~~G~~~~ 79 (86)
T 1lmj_A 70 CECPPGHQLS 79 (86)
T ss_dssp EESCTTSCCC
T ss_pred EECcCCcccC
Confidence 9999999863
No 80
>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A
Probab=95.87 E-value=0.0019 Score=57.81 Aligned_cols=44 Identities=36% Similarity=0.724 Sum_probs=14.6
Q ss_pred cCccccCCCCCCC---cccccccccCcC--CCCCCCceec----CCeeecCCCcccCC
Q 003853 257 KEECDCKYDGLLG---QFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYGVD 305 (791)
Q Consensus 257 ~g~C~C~~~G~~G---~~Ce~~~~~~C~--~~Cs~~G~C~----~G~C~C~~G~~G~~ 305 (791)
.+.|.|+ +||+| ..|+. .+.|. ++|. ++|+ ...|.|++||.|..
T Consensus 49 ~y~C~C~-~Gy~g~~g~~C~d--ideC~~~~~C~--~~C~n~~gsy~C~C~~Gy~~~~ 101 (107)
T 2w2n_E 49 GYECLCP-DGFQLVAQRRCED--IDECQDPDTCS--QLCVNLEGGYKCQCEEGFQLDP 101 (107)
T ss_dssp SCEEECC-TTCEEETTTEEEC-------------------------------------
T ss_pred CeEEECC-CCccccCCCcccc--ccccCCCCCcC--CeeecCCCCEEEECCCCceECC
Confidence 5799999 99998 78983 23453 5685 6887 45899999999754
No 81
>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*
Probab=95.82 E-value=0.0023 Score=49.64 Aligned_cols=31 Identities=26% Similarity=0.592 Sum_probs=26.2
Q ss_pred cCCCCCCCceec--C----CeeecCCCcccCCCCCcc
Q 003853 280 CVNQCSGHGHCR--G----GFCQCDSGWYGVDCSIPS 310 (791)
Q Consensus 280 C~~~Cs~~G~C~--~----G~C~C~~G~~G~~C~~~~ 310 (791)
..++|.++|+|. . ..|.|++||+|..|++..
T Consensus 10 ~~~pC~nGG~C~~~~~~~~~~C~C~~GytG~~Ce~~~ 46 (53)
T 1nql_B 10 HDGYCLHDGVCMYIEALDKYACNCVVGYIGERCQYRD 46 (53)
T ss_dssp TCCEECTTCEEEEETTTTEEEEEECTTEESTTSCEEC
T ss_pred CCCCCCCCeEEeeecCCCCEEEecCCCCcCCCCCcCC
Confidence 357899999996 2 389999999999999865
No 82
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.74 E-value=0.033 Score=66.13 Aligned_cols=43 Identities=37% Similarity=0.766 Sum_probs=31.8
Q ss_pred cCccccCCCCCC---CcccccccccCcC--CCCCCCceec----CCeeecCCCcccC
Q 003853 257 KEECDCKYDGLL---GQFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYGV 304 (791)
Q Consensus 257 ~g~C~C~~~G~~---G~~Ce~~~~~~C~--~~Cs~~G~C~----~G~C~C~~G~~G~ 304 (791)
.+.|.|+ +||. |..|+.. ..|. +.|+ ..|. ...|.|.+||.+.
T Consensus 314 ~~~C~C~-~G~~~~~~~~C~di--deC~~~~~C~--~~C~n~~g~y~C~C~~G~~~~ 365 (699)
T 1n7d_A 314 GYECLCP-DGFQLVAQRRCEDI--DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 365 (699)
T ss_dssp CCCCCCC-SSSCCCSSSCCCCC--CCCSSSSSCT--TTCCBCSSCBCCCCCSSCBCC
T ss_pred CcEEeCC-CCeEcCCCCcccCc--cccCCCCccc--cccccCCCCeeeeeecccccC
Confidence 5799999 9999 7889743 3443 4575 3675 4589999999974
No 83
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=95.70 E-value=0.0081 Score=55.09 Aligned_cols=35 Identities=29% Similarity=0.673 Sum_probs=27.3
Q ss_pred CCCCCCEEecC---CC--eeeeCCCCcCCCCCccccCCCC
Q 003853 126 DCSGQGVCNHE---LG--QCRCFHGFRGKGCSERIHFQCN 160 (791)
Q Consensus 126 ~Cs~~G~C~~~---~G--~C~C~~G~~G~~Ce~~~~~~C~ 160 (791)
+|.|+|+|... .+ .|.|++||+|..|+.....+|.
T Consensus 2 pC~nggtC~~~~~~~~~~~C~Cp~g~~G~~Ce~~~~~~C~ 41 (122)
T 2fd6_A 2 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCY 41 (122)
T ss_dssp CCCSSCEEEECTTTTTCEEEECCTTEESTTSCEESSCCSB
T ss_pred CCCCcCCcCCCcccCCCCCccCCCCCCCccccccCcCCCc
Confidence 59999999754 22 7999999999999986433444
No 84
>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1
Probab=95.66 E-value=0.0026 Score=54.44 Aligned_cols=45 Identities=27% Similarity=0.614 Sum_probs=33.1
Q ss_pred cCccccCCCCCC-----CcccccccccCcC-C--CCCCCceec----CCeeecCCCcccCC
Q 003853 257 KEECDCKYDGLL-----GQFCEVPVSSTCV-N--QCSGHGHCR----GGFCQCDSGWYGVD 305 (791)
Q Consensus 257 ~g~C~C~~~G~~-----G~~Ce~~~~~~C~-~--~Cs~~G~C~----~G~C~C~~G~~G~~ 305 (791)
.++|.|+ +||+ |..|+.. +.|. + .|. +|+|+ ...|.|++||.|..
T Consensus 24 ~y~C~C~-~Gy~~~~~~g~~C~di--deC~~~~~~C~-~~~C~n~~g~y~C~C~~G~~~~~ 80 (86)
T 1lmj_A 24 DFECKCD-EGYESGFMMMKNCMDI--DECQRDPLLCR-GGVCHNTEGSYRCECPPGHQLSP 80 (86)
T ss_dssp EEEECCC-SSEEECTTTSSSEEEC--CHHHHCSSTTT-TSEEEEETTEEEEESCTTSCCCS
T ss_pred CEEeeCC-CCcCccCCCCCccCCc--ccccCCCCcCC-CCEeEcCCCCEEEECcCCcccCC
Confidence 5799999 9998 7888742 3342 3 375 58997 34899999998853
No 85
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=95.65 E-value=0.0047 Score=48.88 Aligned_cols=29 Identities=31% Similarity=0.739 Sum_probs=24.3
Q ss_pred CCCCCCEEecC----CC--eeeeCCCCcCCCCCcc
Q 003853 126 DCSGQGVCNHE----LG--QCRCFHGFRGKGCSER 154 (791)
Q Consensus 126 ~Cs~~G~C~~~----~G--~C~C~~G~~G~~Ce~~ 154 (791)
.|.|+|+|... .+ .|.|++||+|..||..
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~ 49 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYK 49 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEE
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCccc
Confidence 69999999732 11 7999999999999985
No 86
>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A
Probab=95.46 E-value=0.01 Score=45.90 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=27.9
Q ss_pred CCCCCCcccc--CCcchhhcccccccCccccCCCCCCCcccccccccCc
Q 003853 234 TNGSKPGWCN--VDPEEAYALKVQFKEECDCKYDGLLGQFCEVPVSSTC 280 (791)
Q Consensus 234 ~~C~~~G~C~--~~~~~~~~~~~c~~g~C~C~~~G~~G~~Ce~~~~~~C 280 (791)
.+|.++|.|. .... .+.|.|+ +||+|..|+..+.+.+
T Consensus 12 ~pC~ngg~C~~~~~~~---------~~~C~C~-~G~~G~~Ce~~~~~~~ 50 (53)
T 1egf_A 12 GYCLNGGVCMHIESLD---------SYTCNCV-IGYSGDRCQTRDLRWW 50 (53)
T ss_dssp CSSCSSCEEEEESSSS---------CEEEECC-TTCCSSSSCCCSCCCC
T ss_pred CcCCCCcEEEeeCCCC---------CEEEECC-CCCcCCcCCccCcccc
Confidence 4788999996 3322 5689999 9999999998654444
No 87
>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A
Probab=95.41 E-value=0.0064 Score=45.68 Aligned_cols=27 Identities=33% Similarity=0.968 Sum_probs=23.2
Q ss_pred CCCCCCceec------CCeeecCCCcccCCCCCc
Q 003853 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSIP 309 (791)
Q Consensus 282 ~~Cs~~G~C~------~G~C~C~~G~~G~~C~~~ 309 (791)
++|.+ |+|. ...|.|++||+|..|++.
T Consensus 12 ~pC~n-G~C~~~~~~~~~~C~C~~GytG~~Ce~~ 44 (46)
T 1k36_A 12 GYCLH-GQCIYLVDMSQNYCRCEVGYTGVRCEHF 44 (46)
T ss_dssp SSCSS-EEEEEETTTTEEEEEECTTCSSTTSCCC
T ss_pred CCCCC-CEeeccCCCCCEEEECCCCCccCCCCcc
Confidence 68998 9996 238999999999999975
No 88
>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A
Probab=95.22 E-value=0.0075 Score=48.41 Aligned_cols=30 Identities=27% Similarity=0.716 Sum_probs=25.3
Q ss_pred CCCCCCCceecC---------CeeecCCCcccCCCCCcc
Q 003853 281 VNQCSGHGHCRG---------GFCQCDSGWYGVDCSIPS 310 (791)
Q Consensus 281 ~~~Cs~~G~C~~---------G~C~C~~G~~G~~C~~~~ 310 (791)
.++|.++|+|.. ..|.|++||+|..|++.+
T Consensus 11 ~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce~~i 49 (63)
T 1hae_A 11 KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCTENV 49 (63)
T ss_dssp HTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSCEEC
T ss_pred CCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccCcCc
Confidence 468999999962 379999999999999754
No 89
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=95.16 E-value=0.0034 Score=68.08 Aligned_cols=31 Identities=39% Similarity=0.897 Sum_probs=27.8
Q ss_pred CCCCCCCCCCCEEecCCCeeeeCCCCcCCC--CCc
Q 003853 121 KSCKSDCSGQGVCNHELGQCRCFHGFRGKG--CSE 153 (791)
Q Consensus 121 ~~C~~~Cs~~G~C~~~~G~C~C~~G~~G~~--Ce~ 153 (791)
..||+.|+|||.|+ .|+|.|.+||.|.+ |..
T Consensus 192 ~~Cp~~CsGhG~C~--~g~C~Cd~G~~g~d~~C~~ 224 (387)
T 2ddu_A 192 EPCPSYCSGHGDCI--SGVCFCDLGYTAAQGTCVS 224 (387)
T ss_dssp SCCGGGGGGSEEEE--TTEEEECTTEEEETTEEEE
T ss_pred ccCccccCCCceec--CCeEEecCCcccCCCcccc
Confidence 56999999999998 69999999999976 765
No 90
>2ddu_A Reelin; beta-jelly-roll, signaling protein; 2.05A {Mus musculus}
Probab=95.10 E-value=0.0039 Score=67.57 Aligned_cols=33 Identities=39% Similarity=1.022 Sum_probs=29.1
Q ss_pred cCcCCCCCCCceecCCeeecCCCcccCC--CCCcc
Q 003853 278 STCVNQCSGHGHCRGGFCQCDSGWYGVD--CSIPS 310 (791)
Q Consensus 278 ~~C~~~Cs~~G~C~~G~C~C~~G~~G~~--C~~~~ 310 (791)
..|++.|+|||.|+.|.|.|.+||.|.+ |....
T Consensus 192 ~~Cp~~CsGhG~C~~g~C~Cd~G~~g~d~~C~~~~ 226 (387)
T 2ddu_A 192 EPCPSYCSGHGDCISGVCFCDLGYTAAQGTCVSNT 226 (387)
T ss_dssp SCCGGGGGGSEEEETTEEEECTTEEEETTEEEESS
T ss_pred ccCccccCCCceecCCeEEecCCcccCCCcccccc
Confidence 4799999999999999999999999976 77543
No 91
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=95.00 E-value=0.052 Score=52.75 Aligned_cols=88 Identities=10% Similarity=0.017 Sum_probs=64.2
Q ss_pred hhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC---CH
Q 003853 629 ENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL---NE 704 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i---~~ 704 (791)
.++.+.|+.+.+.+.|.- ++++..++|||.+|+ |||.++.- .+.+++ -....+.++..+...|.+.|..+ .+
T Consensus 107 ~~~~~~~~~ad~~l~ps~~e~~~~~~~Ea~a~G~-PvI~~~~~--~~~e~~-~~~~g~~~~~~~~~~l~~~i~~l~~~~~ 182 (200)
T 2bfw_A 107 EFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGA-IPIASAVG--GLRDII-TNETGILVKAGDPGELANAILKALELSR 182 (200)
T ss_dssp HHHHHHHTTCSEEEECCSCCSSCHHHHHHHHTTC-EEEEESCH--HHHHHC-CTTTCEEECTTCHHHHHHHHHHHHHCCH
T ss_pred HHHHHHHHHCCEEEECCCCCCccHHHHHHHHCCC-CEEEeCCC--ChHHHc-CCCceEEecCCCHHHHHHHHHHHHhcCH
Confidence 478899999999999875 356777999999997 67777642 234445 33445666777777666665554 77
Q ss_pred HHHHHHHHHHHHHHHh
Q 003853 705 TEIQFRLANVQKVWQR 720 (791)
Q Consensus 705 ~~~~~m~~~~~~~~~~ 720 (791)
+++.+|.++.++..+.
T Consensus 183 ~~~~~~~~~a~~~~~~ 198 (200)
T 2bfw_A 183 SDLSKFRENCKKRAMS 198 (200)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 8889999988877665
No 92
>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}
Probab=94.80 E-value=0.011 Score=64.66 Aligned_cols=16 Identities=25% Similarity=0.407 Sum_probs=12.1
Q ss_pred CCeeeeCCCcccCCCC
Q 003853 185 RAMCFCGEGTKYPNRP 200 (791)
Q Consensus 185 ~g~C~C~~G~~G~~c~ 200 (791)
.+.|.|.+||.|.+|+
T Consensus 271 ~~~C~C~~nt~G~~Ce 286 (375)
T 4aqt_A 271 KLMCNCKHNTYGVDCE 286 (375)
T ss_dssp CEEECCCTTEESTTSC
T ss_pred CeeeeCcCCCcCCCcc
Confidence 3468888888887774
No 93
>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A
Probab=94.71 E-value=0.013 Score=53.65 Aligned_cols=61 Identities=25% Similarity=0.379 Sum_probs=42.4
Q ss_pred CCCCCccccCCcchhhcccccccC-ccccCCCCCCCcccccccccCcCCCCCCCceecCCeeecCCCcccCCCCC
Q 003853 235 NGSKPGWCNVDPEEAYALKVQFKE-ECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSI 308 (791)
Q Consensus 235 ~C~~~G~C~~~~~~~~~~~~c~~g-~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~~G~C~C~~G~~G~~C~~ 308 (791)
+|.|+|+|...... ... .|.|+ +||+|..||+.....|.. +.| ...+|.|..++.|..|+.
T Consensus 2 pC~nggtC~~~~~~-------~~~~~C~Cp-~g~~G~~Ce~~~~~~C~~---g~G--~~YrG~~~~t~sG~~Cq~ 63 (122)
T 2fd6_A 2 DCLNGGTCVSNKYF-------SNIHWCNCP-KKFGGQHCEIDKSKTCYE---GNG--HFYRGKASTDTMGRPCLP 63 (122)
T ss_dssp CCCSSCEEEECTTT-------TTCEEEECC-TTEESTTSCEESSCCSBC---SSC--TTCCSCCCBBTTSCBBCC
T ss_pred CCCCcCCcCCCccc-------CCCCCccCC-CCCCCccccccCcCCCcc---ccc--ccceeeccccccCCcccC
Confidence 47888999542100 023 89999 999999999875433332 122 356888999999999987
No 94
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=94.43 E-value=0.0085 Score=65.81 Aligned_cols=61 Identities=26% Similarity=0.786 Sum_probs=13.1
Q ss_pred CCC-CCCCCCCCEEecCCC--eeeeCCCCc----CCCCCccccCCCCCCCCCCCCCCCcccccCCCCCCCCCC--eeeeC
Q 003853 121 KSC-KSDCSGQGVCNHELG--QCRCFHGFR----GKGCSERIHFQCNFPKTPELPYGRWVVSICPTHCDTTRA--MCFCG 191 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~----G~~Ce~~~~~~C~~~~~~~~~~g~~~~~~C~g~C~~~~g--~C~C~ 191 (791)
++| .++|....+|....| .|.|++||+ |..|+. ..+|... ..|...|....| .|.|.
T Consensus 4 ~~C~~~~~~c~~~C~~~~g~~~C~C~~G~~l~~~~~~C~d--~~eC~~~------------~~C~~~C~~~~g~~~C~C~ 69 (386)
T 3v65_B 4 ENCNVNNGGCAQKCQMIRGAVQCTCHTGYRLTEDGRTCQD--VNECAEE------------GYCSQGCTNSEGAFQCWCE 69 (386)
T ss_dssp --------------------------------------------------------------CCTTEEC-----CCEECC
T ss_pred CcccCCCCCCCCCCcCCCCCcEeECCCCceECCCCCccCc--cceeCCc------------CcccCcCCCCCCCCeEEEC
Confidence 566 333333348865555 799999998 999953 4677521 256666766644 89999
Q ss_pred CCcc
Q 003853 192 EGTK 195 (791)
Q Consensus 192 ~G~~ 195 (791)
+||.
T Consensus 70 ~g~~ 73 (386)
T 3v65_B 70 AGYE 73 (386)
T ss_dssp TTEE
T ss_pred CCce
Confidence 9997
No 95
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=94.36 E-value=0.038 Score=66.54 Aligned_cols=43 Identities=37% Similarity=0.766 Sum_probs=31.0
Q ss_pred cCccccCCCCCC---CcccccccccCcC--CCCCCCceec----CCeeecCCCcccC
Q 003853 257 KEECDCKYDGLL---GQFCEVPVSSTCV--NQCSGHGHCR----GGFCQCDSGWYGV 304 (791)
Q Consensus 257 ~g~C~C~~~G~~---G~~Ce~~~~~~C~--~~Cs~~G~C~----~G~C~C~~G~~G~ 304 (791)
.+.|.|+ +||. |..|+.. ..|. ..|+ +.|. ...|.|.+||.+.
T Consensus 332 ~y~C~C~-~Gy~l~~g~~C~di--deC~~~~~C~--~~C~n~~gsy~C~C~~Gy~l~ 383 (791)
T 3m0c_C 332 GYECLCP-DGFQLVAQRRCEDI--DECQDPDTCS--QLCVNLEGGYKCQCEEGFQLD 383 (791)
T ss_dssp SEEEECC-TTCEEETTTEEECC--CCCSSSSSCT--TTCCBCSSCBCCCCCSSEECC
T ss_pred CcccCCC-CCCccCCCCccccC--cccCCCCCCC--CeeecCCCCceeecCCCCEeC
Confidence 4689999 9994 8899743 3453 3454 4676 4599999999763
No 96
>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}
Probab=94.14 E-value=0.016 Score=45.78 Aligned_cols=28 Identities=29% Similarity=0.755 Sum_probs=24.0
Q ss_pred CCCCCceec--C------CeeecCCCcccCCCCCcc
Q 003853 283 QCSGHGHCR--G------GFCQCDSGWYGVDCSIPS 310 (791)
Q Consensus 283 ~Cs~~G~C~--~------G~C~C~~G~~G~~C~~~~ 310 (791)
+|.|+|+|. . ..|.|++||+|..|+...
T Consensus 15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce~~~ 50 (58)
T 3ltf_D 15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCEYKE 50 (58)
T ss_dssp TSCSSCEEEEEEETTEEEEEEEECTTEESSSSCEEC
T ss_pred cCCCCCEEeCCccCCCCCEEeECCCCCccCCCcccC
Confidence 699999996 2 279999999999999854
No 97
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=94.10 E-value=0.016 Score=55.41 Aligned_cols=53 Identities=34% Similarity=0.750 Sum_probs=36.7
Q ss_pred CCCceee-ccCCCcccccccCcccCCCC-CCCCCCCCEEecCCC--eeeeCCCCcCCCCCcc
Q 003853 97 EIGRWLS-GCDSVAKEVDLVEMIGGKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSER 154 (791)
Q Consensus 97 ~~g~~~~-~~~~~~~~~~~~~~~~~~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~ 154 (791)
..|.|.. .|.. ....-| ....| +.+|.++|+|....+ +|.|++||+|..||..
T Consensus 100 ~~~~W~d~~C~~-~~~fIC----e~~~c~~~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 100 APGKWNDEHCLK-KKHALC----YTASCQDMSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp STTCEEEECTTS-CEEEEE----EECCCCTTGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CCCeEECCCCCC-CCCEEE----EeCCCcCCCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 3566764 4432 222322 23567 677999999986544 7999999999999986
No 98
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=93.96 E-value=0.055 Score=58.57 Aligned_cols=93 Identities=14% Similarity=0.143 Sum_probs=68.9
Q ss_pred hhHHHhhccCeEEEeCC--CCCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC--CH
Q 003853 629 ENYHEDLSSSVFCGVLP--GDGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL--NE 704 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~--G~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i--~~ 704 (791)
.++.+.|+.+.+.+.|. .++++..++|||.+|+ |||.++.-. +.++++-....+.++..+..+|.+.|..+ .+
T Consensus 274 ~~~~~~~~~adv~v~ps~~~e~~~~~~~Ea~a~G~-PvI~~~~~~--~~e~i~~~~~g~~~~~~d~~~l~~~i~~l~~~~ 350 (406)
T 2gek_A 274 ATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGT-AVVASDLDA--FRRVLADGDAGRLVPVDDADGMAAALIGILEDD 350 (406)
T ss_dssp HHHHHHHHHSSEEEECCCSCCSSCHHHHHHHHHTC-EEEECCCHH--HHHHHTTTTSSEECCTTCHHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHCCEEEecCCCCCCCchHHHHHHHcCC-CEEEecCCc--HHHHhcCCCceEEeCCCCHHHHHHHHHHHHcCH
Confidence 46789999999999994 5677788999999997 888877522 33445444556677777777766666555 67
Q ss_pred HHHHHHHHHHHHHHHhheec
Q 003853 705 TEIQFRLANVQKVWQRFLYR 724 (791)
Q Consensus 705 ~~~~~m~~~~~~~~~~~~~~ 724 (791)
+...+|.++.++..++|-|.
T Consensus 351 ~~~~~~~~~~~~~~~~~s~~ 370 (406)
T 2gek_A 351 QLRAGYVARASERVHRYDWS 370 (406)
T ss_dssp HHHHHHHHHHHHHGGGGBHH
T ss_pred HHHHHHHHHHHHHHHhCCHH
Confidence 77888988888877766553
No 99
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=93.86 E-value=0.025 Score=65.09 Aligned_cols=34 Identities=35% Similarity=0.922 Sum_probs=29.3
Q ss_pred CCC-CCCCCCCCEEec-CCC--eeeeC-CCCcCCCCCcc
Q 003853 121 KSC-KSDCSGQGVCNH-ELG--QCRCF-HGFRGKGCSER 154 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~-~~G--~C~C~-~G~~G~~Ce~~ 154 (791)
++| +++|.|+|+|.. ..+ +|.|+ +||+|.+||..
T Consensus 3 d~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 41 (553)
T 1q4g_A 3 NPCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIP 41 (553)
T ss_dssp CGGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEE
T ss_pred CcCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCC
Confidence 678 788999999986 344 79999 99999999985
No 100
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=93.77 E-value=0.022 Score=62.85 Aligned_cols=44 Identities=36% Similarity=0.741 Sum_probs=33.4
Q ss_pred cCccccCCCCCC---CcccccccccCc--CCCCCCCceec----CCeeecCCCcccCC
Q 003853 257 KEECDCKYDGLL---GQFCEVPVSSTC--VNQCSGHGHCR----GGFCQCDSGWYGVD 305 (791)
Q Consensus 257 ~g~C~C~~~G~~---G~~Ce~~~~~~C--~~~Cs~~G~C~----~G~C~C~~G~~G~~ 305 (791)
.+.|.|+ +||. |..|+.. +.| +.+|++ .|. ...|.|.+||.+..
T Consensus 20 ~y~C~C~-~G~~~~~~~~C~di--deC~~~~~C~~--~C~n~~g~~~C~C~~g~~~~~ 72 (400)
T 3p5b_L 20 GYECLCP-DGFQLVAQRRCEDI--DECQDPDTCSQ--LCVNLEGGYKCQCEEGFQLDP 72 (400)
T ss_dssp SEEEECC-TTEEECSSSCEEEC--CCCSTTSSCSS--CCBCCSSSCBCCCCTTCCCCT
T ss_pred CeEEECC-CCCCcCCCCcccCc--hhhhccCCCCC--ccCCCccceeeeccccccccc
Confidence 5789999 9998 8999743 344 356764 786 45999999999753
No 101
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=93.64 E-value=0.18 Score=54.58 Aligned_cols=94 Identities=12% Similarity=0.052 Sum_probs=69.6
Q ss_pred chhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC--CH
Q 003853 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL--NE 704 (791)
Q Consensus 628 ~~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i--~~ 704 (791)
..+..+.|+.+.+.+.|.- ++++.-++|||.+| +|||.++.- ...+++.-....+.++..+..+|.+.|..+ .+
T Consensus 275 ~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G-~PvI~~~~~--~~~e~v~~~~~g~~~~~~d~~~la~~i~~l~~~~ 351 (394)
T 2jjm_A 275 QDNVAELLAMSDLMLLLSEKESFGLVLLEAMACG-VPCIGTRVG--GIPEVIQHGDTGYLCEVGDTTGVADQAIQLLKDE 351 (394)
T ss_dssp CSCTHHHHHTCSEEEECCSCCSCCHHHHHHHHTT-CCEEEECCT--TSTTTCCBTTTEEEECTTCHHHHHHHHHHHHHCH
T ss_pred hhhHHHHHHhCCEEEeccccCCCchHHHHHHhcC-CCEEEecCC--ChHHHhhcCCceEEeCCCCHHHHHHHHHHHHcCH
Confidence 4567889999999888764 45677899999999 688888742 345666655667778877877666666554 67
Q ss_pred HHHHHHHHHHHHHH-Hhheec
Q 003853 705 TEIQFRLANVQKVW-QRFLYR 724 (791)
Q Consensus 705 ~~~~~m~~~~~~~~-~~~~~~ 724 (791)
+...+|.++.++.. ++|-|.
T Consensus 352 ~~~~~~~~~~~~~~~~~~s~~ 372 (394)
T 2jjm_A 352 ELHRNMGERARESVYEQFRSE 372 (394)
T ss_dssp HHHHHHHHHHHHHHHHHSCHH
T ss_pred HHHHHHHHHHHHHHHHhCCHH
Confidence 77888988888766 777654
No 102
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=93.45 E-value=0.17 Score=54.21 Aligned_cols=92 Identities=10% Similarity=0.095 Sum_probs=69.1
Q ss_pred hhHHHhhccCeEEEeCCC--------CCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHh
Q 003853 629 ENYHEDLSSSVFCGVLPG--------DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILR 700 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G--------~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~ 700 (791)
.+..+.|+.+.+.+.|.- .+++..++|||.+| +|||.++. -...++++-. ..+.++..+...|.+.|.
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G-~PvI~~~~--~~~~e~i~~~-~g~~~~~~d~~~l~~~i~ 339 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACG-VPVIAGTS--GGAPETVTPA-TGLVVEGSDVDKLSELLI 339 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTT-CCEEECSS--TTGGGGCCTT-TEEECCTTCHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcC-CCEEEeCC--CChHHHHhcC-CceEeCCCCHHHHHHHHH
Confidence 678899999999998875 45567899999999 68888774 2445666655 777888878777666665
Q ss_pred cC--CHHHHHHHHHHHHHHHH-hheec
Q 003853 701 GL--NETEIQFRLANVQKVWQ-RFLYR 724 (791)
Q Consensus 701 ~i--~~~~~~~m~~~~~~~~~-~~~~~ 724 (791)
.+ .++...+|.++.++... +|-|.
T Consensus 340 ~l~~~~~~~~~~~~~~~~~~~~~~s~~ 366 (394)
T 3okp_A 340 ELLDDPIRRAAMGAAGRAHVEAEWSWE 366 (394)
T ss_dssp HHHTCHHHHHHHHHHHHHHHHHHTBHH
T ss_pred HHHhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 54 67888899888877554 57654
No 103
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=93.27 E-value=0.032 Score=64.35 Aligned_cols=34 Identities=29% Similarity=0.935 Sum_probs=28.5
Q ss_pred CCC-CCCCCCCCEEec-CCC--eeeeC-CCCcCCCCCcc
Q 003853 121 KSC-KSDCSGQGVCNH-ELG--QCRCF-HGFRGKGCSER 154 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~-~~G--~C~C~-~G~~G~~Ce~~ 154 (791)
++| +++|.|+|+|.. ..+ .|.|+ +||+|.+|+..
T Consensus 2 d~C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~ 40 (587)
T 3nt1_A 2 NPCCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTP 40 (587)
T ss_dssp CTTTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEE
T ss_pred CCCCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCc
Confidence 567 789999999984 223 79999 99999999985
No 104
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=93.18 E-value=0.071 Score=40.68 Aligned_cols=28 Identities=32% Similarity=0.873 Sum_probs=22.3
Q ss_pred CCCCCCCEEe--cCCC--eeeeCCCCcCCCCCc
Q 003853 125 SDCSGQGVCN--HELG--QCRCFHGFRGKGCSE 153 (791)
Q Consensus 125 ~~Cs~~G~C~--~~~G--~C~C~~G~~G~~Ce~ 153 (791)
+.|.+ |+|. .+.+ .|.|+.||+|+.|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 67885 7996 3333 699999999999985
No 105
>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A
Probab=92.91 E-value=0.033 Score=44.40 Aligned_cols=30 Identities=30% Similarity=0.813 Sum_probs=25.1
Q ss_pred CCCCCCC--ceec----CCeeecCCCcc-cCCCCCcc
Q 003853 281 VNQCSGH--GHCR----GGFCQCDSGWY-GVDCSIPS 310 (791)
Q Consensus 281 ~~~Cs~~--G~C~----~G~C~C~~G~~-G~~C~~~~ 310 (791)
+++|.++ |+|. ...|.|++||+ |..|+...
T Consensus 16 snPC~nga~gtC~~~~g~y~C~C~~Gy~~G~~C~~~~ 52 (61)
T 2k2s_B 16 SNPCGPEAAGTCKETNSGYICRCNQGYRISLDGTGNV 52 (61)
T ss_dssp HCSSCSSSCCEEEECSSEEEEECCTTEEEEECSSSCE
T ss_pred CCCCcCCCccccccCCCceEeECCCCCccCCCCCCCC
Confidence 4789988 8997 34899999999 99998653
No 106
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=92.69 E-value=0.2 Score=54.95 Aligned_cols=93 Identities=8% Similarity=-0.021 Sum_probs=68.5
Q ss_pred hhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC--CHH
Q 003853 629 ENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL--NET 705 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i--~~~ 705 (791)
.+..+.|+.+.+.+.|.- ++++..++|||.+|+ |||.++.- .+.+++.-....+.++..+...|.+.|..+ .++
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~~~~ 393 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLVAMEAQASGT-PVIAARVG--GLPIAVAEGETGLLVDGHSPHAWADALATLLDDDE 393 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHHHHHHHHTTC-CEEEESCT--THHHHSCBTTTEEEESSCCHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhCCEEEECccccCCchHHHHHHHcCC-CEEecCCC--ChhHHhhCCCcEEECCCCCHHHHHHHHHHHHcCHH
Confidence 578899999999988875 356778999999998 88888742 334556555567777877777666665554 567
Q ss_pred HHHHHHHHHHHHHHhheec
Q 003853 706 EIQFRLANVQKVWQRFLYR 724 (791)
Q Consensus 706 ~~~~m~~~~~~~~~~~~~~ 724 (791)
...+|.++.++..+.|-|.
T Consensus 394 ~~~~~~~~~~~~~~~~s~~ 412 (438)
T 3c48_A 394 TRIRMGEDAVEHARTFSWA 412 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHH
Confidence 7888988888777766543
No 107
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=92.68 E-value=0.36 Score=57.15 Aligned_cols=13 Identities=23% Similarity=0.736 Sum_probs=10.9
Q ss_pred cCccccCCCCCCCc
Q 003853 257 KEECDCKYDGLLGQ 270 (791)
Q Consensus 257 ~g~C~C~~~G~~G~ 270 (791)
.++|.|. +||.+.
T Consensus 353 ~y~C~C~-~G~~~~ 365 (699)
T 1n7d_A 353 GYKCQCE-EGFQLD 365 (699)
T ss_dssp CBCCCCC-SSCBCC
T ss_pred Ceeeeee-cccccC
Confidence 5799998 999863
No 108
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=92.42 E-value=0.056 Score=41.25 Aligned_cols=29 Identities=28% Similarity=0.666 Sum_probs=23.4
Q ss_pred CCCCCCCEEe--cCCC--eeeeCCCCcCCCCCcc
Q 003853 125 SDCSGQGVCN--HELG--QCRCFHGFRGKGCSER 154 (791)
Q Consensus 125 ~~Cs~~G~C~--~~~G--~C~C~~G~~G~~Ce~~ 154 (791)
..|.+ |+|. .+.+ .|+|+.||+|+.||..
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERV 46 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCEE
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCee
Confidence 56887 8995 2333 6999999999999975
No 109
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.30 E-value=0.035 Score=60.80 Aligned_cols=47 Identities=28% Similarity=0.756 Sum_probs=18.1
Q ss_pred cCccccCCCCCC----CcccccccccCc--CCCCCCCceec----CCeeecCCCcc----cCCCCC
Q 003853 257 KEECDCKYDGLL----GQFCEVPVSSTC--VNQCSGHGHCR----GGFCQCDSGWY----GVDCSI 308 (791)
Q Consensus 257 ~g~C~C~~~G~~----G~~Ce~~~~~~C--~~~Cs~~G~C~----~G~C~C~~G~~----G~~C~~ 308 (791)
.+.|.|+ +||. |..|+.. ..| .++|++. |. ...|.|.+||. |..|..
T Consensus 23 ~~~C~C~-~G~~l~~~~~~C~d~--~eC~~~~~C~~~--C~~~~g~~~C~C~~g~~l~~d~~~C~~ 83 (386)
T 3v65_B 23 AVQCTCH-TGYRLTEDGRTCQDV--NECAEEGYCSQG--CTNSEGAFQCWCEAGYELRPDRRSCKA 83 (386)
T ss_dssp --------------------------------CCTTE--EC-----CCEECCTTEEECTTSSCEEE
T ss_pred CcEeECC-CCceECCCCCccCcc--ceeCCcCcccCc--CCCCCCCCeEEECCCceEcCCCCeECC
Confidence 3689999 9998 9999542 345 3578753 86 45999999999 777864
No 110
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=92.18 E-value=0.084 Score=49.75 Aligned_cols=35 Identities=29% Similarity=0.673 Sum_probs=27.3
Q ss_pred CCCCCCEEecC---CC--eeeeCCCCcCCCCCccccCCCC
Q 003853 126 DCSGQGVCNHE---LG--QCRCFHGFRGKGCSERIHFQCN 160 (791)
Q Consensus 126 ~Cs~~G~C~~~---~G--~C~C~~G~~G~~Ce~~~~~~C~ 160 (791)
+|.|+|+|... .+ .|.|++||.|..|+.....+|.
T Consensus 14 pC~NGGtC~~~~~~s~~~~C~Cp~g~~G~~Cei~~~~~C~ 53 (145)
T 2i9a_A 14 DCLNGGTCVSNKYFSNIHWCNCPKKFGGQHCEIDKSKTCY 53 (145)
T ss_dssp CCCTTCEEEECSSSTTCEEEECCTTEESTTSCEESSCCEE
T ss_pred CCCCCCCcCCCccccCCccccCCCCCCCCceeccccccCC
Confidence 69999999753 23 7999999999999986433444
No 111
>1q4g_A Prostaglandin G/H synthase 1; cyclooxygenase, non-steroidal anti-inflammatory drug, peroxi prostaglandin synthase, EGF-like domain; HET: BOG NAG NDG BMA MAN BFL HEM; 2.00A {Ovis aries} SCOP: a.93.1.2 g.3.11.1 PDB: 1diy_A* 2ayl_A* 3kk6_A* 3n8v_A* 3n8w_A* 3n8x_A* 3n8y_A* 3n8z_A* 2oyu_P* 2oye_P* 1eqg_A* 1cqe_A* 1eqh_A* 1igz_A* 1igx_A* 1fe2_A* 1pge_A* 1pgf_A* 1pgg_A* 3n8w_B* ...
Probab=91.84 E-value=0.057 Score=62.09 Aligned_cols=33 Identities=33% Similarity=0.934 Sum_probs=28.2
Q ss_pred cCcCCCCCCCceecC-----CeeecC-CCcccCCCCCcc
Q 003853 278 STCVNQCSGHGHCRG-----GFCQCD-SGWYGVDCSIPS 310 (791)
Q Consensus 278 ~~C~~~Cs~~G~C~~-----G~C~C~-~G~~G~~C~~~~ 310 (791)
.|.+++|.++|+|.. ..|.|. +||+|.+|+++.
T Consensus 4 ~C~~~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~ 42 (553)
T 1q4g_A 4 PCCYYPCQHQGICVRFGLDRYQCDCTRTGYSGPNCTIPE 42 (553)
T ss_dssp GGGGCCCCTTCEEEEETTTEEEEECTTSSEETTTTCEEC
T ss_pred cCCCCCCCCCCCcCCCCCCceEeeCCCCCcCCCCCCCCc
Confidence 345689999999975 389999 999999999865
No 112
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=91.48 E-value=0.1 Score=49.69 Aligned_cols=53 Identities=30% Similarity=0.703 Sum_probs=35.7
Q ss_pred CCCceee-ccCCCcccccccCcccCCCC-CCCCCCCCEEecCCC--eeeeCCCCcCCCCCcc
Q 003853 97 EIGRWLS-GCDSVAKEVDLVEMIGGKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSER 154 (791)
Q Consensus 97 ~~g~~~~-~~~~~~~~~~~~~~~~~~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~ 154 (791)
..|.|.. .|. .....-|. ...| ++.|+++|+|....+ .|.|++||.|..|+..
T Consensus 100 ~~~~W~d~~C~-~~~~fICe----~~~~~~~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~ 156 (164)
T 3cfw_A 100 DAGKWNDDACH-KLKAALCY----TASCQPWSCSGHGECVEIINNYTCNCDVGYYGPQCQFV 156 (164)
T ss_dssp STTCEEEECTT-SCEEEEEE----ECCCCTTSSCSSEEEEEETTEEEEEECTTCBSSSSCBC
T ss_pred CCCceeCCCCC-CCcEeEEc----cCCCCCCcCCCCCeecccCCCceeeeCCCccccccccc
Confidence 3566764 442 22223232 2446 578999999985333 8999999999999975
No 113
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=91.40 E-value=0.12 Score=49.45 Aligned_cols=70 Identities=10% Similarity=0.127 Sum_probs=48.3
Q ss_pred hhHHHhhccCeEEEeCC-CCCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC
Q 003853 629 ENYHEDLSSSVFCGVLP-GDGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL 702 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~-G~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i 702 (791)
.+..+.|+.+.+.+.|. .++++.-++|||.+|+ |||.++.- .+.+++.-....+.+ ..+...|.+.|+.+
T Consensus 89 ~e~~~~~~~adi~v~ps~~e~~~~~~~Eama~G~-PvI~~~~~--~~~e~i~~~~~g~~~-~~d~~~l~~~i~~l 159 (177)
T 2f9f_A 89 EELIDLYSRCKGLLCTAKDEDFGLTPIEAMASGK-PVIAVNEG--GFKETVINEKTGYLV-NADVNEIIDAMKKV 159 (177)
T ss_dssp HHHHHHHHHCSEEEECCSSCCSCHHHHHHHHTTC-CEEEESSH--HHHHHCCBTTTEEEE-CSCHHHHHHHHHHH
T ss_pred HHHHHHHHhCCEEEeCCCcCCCChHHHHHHHcCC-cEEEeCCC--CHHHHhcCCCccEEe-CCCHHHHHHHHHHH
Confidence 45789999999999865 3566777999999997 88887742 234455444455555 66766655555443
No 114
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=91.31 E-value=0.3 Score=51.95 Aligned_cols=94 Identities=12% Similarity=-0.000 Sum_probs=67.2
Q ss_pred chhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEec-CCChhhHHHHHhcC--C
Q 003853 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRIS-EDEIPNLINILRGL--N 703 (791)
Q Consensus 628 ~~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~-~~~~~~l~~~L~~i--~ 703 (791)
..+..+.|+.+.+.+.|.- .+++.-++|||.+|+ |||.++.- ...+++.-....+.++ ..+..+|.+.|..+ .
T Consensus 261 ~~~~~~~~~~ad~~v~ps~~e~~~~~~~Ea~a~G~-Pvi~~~~~--~~~e~i~~~~~g~~~~~~~~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 261 RNDVSELMAAADLLLHPAYQEAAGIVLLEAITAGL-PVLTTAVC--GYAHYIADANCGTVIAEPFSQEQLNEVLRKALTQ 337 (374)
T ss_dssp CSCHHHHHHHCSEEEECCSCCSSCHHHHHHHHHTC-CEEEETTS--TTTHHHHHHTCEEEECSSCCHHHHHHHHHHHHHC
T ss_pred cccHHHHHHhcCEEEeccccCCcccHHHHHHHCCC-CEEEecCC--CchhhhccCCceEEeCCCCCHHHHHHHHHHHHcC
Confidence 4568899999999888764 356777999999998 88888752 2233443345566776 56766665555554 6
Q ss_pred HHHHHHHHHHHHHHHHhheec
Q 003853 704 ETEIQFRLANVQKVWQRFLYR 724 (791)
Q Consensus 704 ~~~~~~m~~~~~~~~~~~~~~ 724 (791)
++...+|.++.++..+.+-|.
T Consensus 338 ~~~~~~~~~~~~~~~~~~~~~ 358 (374)
T 2iw1_A 338 SPLRMAWAENARHYADTQDLY 358 (374)
T ss_dssp HHHHHHHHHHHHHHHHHSCCS
T ss_pred hHHHHHHHHHHHHHHHHhhHH
Confidence 788889999998888777553
No 115
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=90.82 E-value=0.19 Score=53.64 Aligned_cols=90 Identities=8% Similarity=-0.006 Sum_probs=65.7
Q ss_pred hhHHHhhccCeEEEeCCCCCCchhHHHHHhhCCeeEEEecccccCC------cccCCCCcEEEEecCCC--hhhHHHHHh
Q 003853 629 ENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQDGIFLPY------ENVLNYESFVVRISEDE--IPNLINILR 700 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G~~~s~R~~dal~~GCIPVii~d~~~lPf------~~~idw~~~sv~i~~~~--~~~l~~~L~ 700 (791)
.+..+.|+.+...+.|.| +.-++|||.+|+ |||.++.--.|. .++++-.. .+.++..+ ...|.+.|+
T Consensus 246 ~~~~~~~~~ad~~v~~sg---~~~~~EAma~G~-Pvi~~~~~g~~~~q~~~~~~~~~~g~-g~~~~~~d~~~~~la~~i~ 320 (364)
T 1f0k_A 246 DDMAAAYAWADVVVCRSG---ALTVSEIAAAGL-PALFVPFQHKDRQQYWNALPLEKAGA-AKIIEQPQLSVDAVANTLA 320 (364)
T ss_dssp SCHHHHHHHCSEEEECCC---HHHHHHHHHHTC-CEEECCCCCTTCHHHHHHHHHHHTTS-EEECCGGGCCHHHHHHHHH
T ss_pred hhHHHHHHhCCEEEECCc---hHHHHHHHHhCC-CEEEeeCCCCchhHHHHHHHHHhCCc-EEEeccccCCHHHHHHHHH
Confidence 567889999999999876 455999999996 888886543332 13444444 77888877 778888888
Q ss_pred cCCHHHHHHHHHHHHHHHHhhee
Q 003853 701 GLNETEIQFRLANVQKVWQRFLY 723 (791)
Q Consensus 701 ~i~~~~~~~m~~~~~~~~~~~~~ 723 (791)
.++++...+|.++.+++.+.|-|
T Consensus 321 ~l~~~~~~~~~~~~~~~~~~~~~ 343 (364)
T 1f0k_A 321 GWSRETLLTMAERARAASIPDAT 343 (364)
T ss_dssp TCCHHHHHHHHHHHHHTCCTTHH
T ss_pred hcCHHHHHHHHHHHHHhhccCHH
Confidence 88667778888887766555433
No 116
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=90.79 E-value=0.17 Score=38.59 Aligned_cols=29 Identities=28% Similarity=0.754 Sum_probs=22.8
Q ss_pred CCCCCCCEEecCC----CeeeeCCCCcCCCCCcc
Q 003853 125 SDCSGQGVCNHEL----GQCRCFHGFRGKGCSER 154 (791)
Q Consensus 125 ~~Cs~~G~C~~~~----G~C~C~~G~~G~~Ce~~ 154 (791)
..|.+ |+|.... -.|.|++||+|+.|+..
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 14 QFCFH-GTCRFLVQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CcccC-CEEeeccCCCCeEEECCCCCcccCCCce
Confidence 56886 5997422 27999999999999974
No 117
>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A
Probab=89.94 E-value=0.034 Score=53.25 Aligned_cols=64 Identities=27% Similarity=0.501 Sum_probs=39.6
Q ss_pred CCCCCCccccCCcchhhcccccccCccccCCCCCC----CcccccccccCcCC---CC--CCCceec--------CCeee
Q 003853 234 TNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLL----GQFCEVPVSSTCVN---QC--SGHGHCR--------GGFCQ 296 (791)
Q Consensus 234 ~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~----G~~Ce~~~~~~C~~---~C--s~~G~C~--------~G~C~ 296 (791)
..|. +|.|.+..+ .++|.|+ +||+ |..|+...+..|.. +| .++++|+ ...|.
T Consensus 10 ~~C~-~~~C~n~~g---------sy~C~C~-~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C~ 78 (162)
T 1uzk_A 10 TTCI-SGNCVNTPG---------SYICDCP-PDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSNEIGVGVSKASCC 78 (162)
T ss_dssp TSSB-TSEEEEETT---------EEEEECC-TTCEECTTSSBEECCCCEEEEEEC----------CEEEEEEEECHHHHH
T ss_pred CCCC-CCEeECCCC---------CEEEeCC-CCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccCCcCCcccCceee
Confidence 4564 578865432 5799999 9998 89998432223532 23 3577886 24799
Q ss_pred cCCCcc-cCCCCC
Q 003853 297 CDSGWY-GVDCSI 308 (791)
Q Consensus 297 C~~G~~-G~~C~~ 308 (791)
|++||. |..|+.
T Consensus 79 C~~G~~~~~~C~~ 91 (162)
T 1uzk_A 79 CSLGKAWGTPCEM 91 (162)
T ss_dssp TTTCCEETTTTEE
T ss_pred CCCCCCcCCCccc
Confidence 999998 777763
No 118
>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...
Probab=89.85 E-value=0.11 Score=59.85 Aligned_cols=32 Identities=38% Similarity=1.110 Sum_probs=27.4
Q ss_pred CcCCCCCCCceecC-----CeeecC-CCcccCCCCCcc
Q 003853 279 TCVNQCSGHGHCRG-----GFCQCD-SGWYGVDCSIPS 310 (791)
Q Consensus 279 ~C~~~Cs~~G~C~~-----G~C~C~-~G~~G~~C~~~~ 310 (791)
|.+++|.++|+|.. ..|.|. +||+|..|+.+.
T Consensus 4 C~s~PC~ngG~C~~~~~~~y~C~C~~~G~~G~~Ce~~~ 41 (587)
T 3nt1_A 4 CCSNPCQNRGECMSTGFDQYKCDCTRTGFYGENCTTPE 41 (587)
T ss_dssp TTTCCCCTTCEEEEEETTEEEEECTTSSEETTTTCEEC
T ss_pred CCCCCCCCCCEeeCCCCCCeEEecCCCCccCCCCCCch
Confidence 45689999999972 389999 999999999864
No 119
>2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A*
Probab=89.68 E-value=1 Score=48.86 Aligned_cols=99 Identities=16% Similarity=0.229 Sum_probs=62.1
Q ss_pred hHHHHHHHHhcCCCCCccccCcccCcceEEecCCchhHHHhhccCeEEEeCCCC---CC-chhHHHHHhhCCeeEEEecc
Q 003853 594 GVRQKLAEEYGSSPNKEGKLGKQHAEDVIVTSLRSENYHEDLSSSVFCGVLPGD---GW-SGRMEDSILQGCIPVVIQDG 669 (791)
Q Consensus 594 ~iR~~L~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~y~~~l~~S~FCl~p~G~---~~-s~R~~dal~~GCIPVii~d~ 669 (791)
..|..+++.+...-... ..|++... .+.......+.|++-||-|+.--. .+ |-.|++||.+|||||++...
T Consensus 193 ~~R~~~~~~L~k~i~Vd-~~G~c~~~----~~~~~~~~~~~l~~YKFyLafENs~c~dYvTEK~~~al~~g~VPI~~G~~ 267 (371)
T 2nzw_A 193 PIRNAFYDALNSIEPVT-GGGSVRNT----LGYNVKNKNEFLSQYKFNLCFENTQGYGYVTEKIIDAYFSHTIPIYWGSP 267 (371)
T ss_dssp HHHHHHHHHHTTTSCCE-ECSSTTCC----SSSCCSCHHHHHTTEEEEEEECSSCCTTCCCTHHHHHHHTTCEEEEESCT
T ss_pred HHHHHHHHHHhCcCCEe-eCCCccCC----CCCccccHHHHHhcCcEEEEEeccCCCCcccHHHHHHHhCCeEEEEECCC
Confidence 47999999986543222 22332111 011224578899999999987653 23 88999999999999999653
Q ss_pred -c--ccCCcccCCCCcEEEEecCCChhhHHHHHhcCC
Q 003853 670 -I--FLPYENVLNYESFVVRISEDEIPNLINILRGLN 703 (791)
Q Consensus 670 -~--~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i~ 703 (791)
+ .+|=...|+.++| +...+|.+.|+.+.
T Consensus 268 ~~~~~~Pp~SfI~~~dF------~s~~~La~yL~~L~ 298 (371)
T 2nzw_A 268 SVAKDFNPKSFVNVHDF------KNFDEAIDYIKYLH 298 (371)
T ss_dssp TGGGTSCGGGSEEGGGS------SSHHHHHHHHHHHH
T ss_pred chhhhCCCCceEEcccC------CCHHHHHHHHHHHh
Confidence 2 2343444544444 34556777766653
No 120
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=89.39 E-value=0.11 Score=49.10 Aligned_cols=52 Identities=31% Similarity=0.783 Sum_probs=35.3
Q ss_pred CCceee-ccCCCcccccccCcccCCCC-CCCCCCCCEEecCCC--eeeeCCCCcCCCCCcc
Q 003853 98 IGRWLS-GCDSVAKEVDLVEMIGGKSC-KSDCSGQGVCNHELG--QCRCFHGFRGKGCSER 154 (791)
Q Consensus 98 ~g~~~~-~~~~~~~~~~~~~~~~~~~C-~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~ 154 (791)
.|.|.. .|.. ....-| ....| +++|.++|+|....+ .|.|.+||+|+.||..
T Consensus 101 ~~~W~d~~C~~-~~~fIC----e~~~~~~~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 101 VGMWNDERCSK-KKLALC----YTAACTNTSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp TTCEEEECTTS-CBEEEE----EECCCCTTGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CCccccCCCCC-CcceEe----CcCCCCCCCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 566763 4432 222222 23556 567999999975444 7999999999999974
No 121
>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A
Probab=89.24 E-value=0.1 Score=49.56 Aligned_cols=28 Identities=36% Similarity=0.926 Sum_probs=23.7
Q ss_pred CCCCCCceec----CCeeecCCCcccCCCCCc
Q 003853 282 NQCSGHGHCR----GGFCQCDSGWYGVDCSIP 309 (791)
Q Consensus 282 ~~Cs~~G~C~----~G~C~C~~G~~G~~C~~~ 309 (791)
++|.++|+|. ...|+|.+||.|..|+.-
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~G~~Ce~~ 156 (162)
T 1g1s_A 125 MSCSKQGECLETIGNYTCSCYPGFYGPECEYV 156 (162)
T ss_dssp TGGGGSEEEEECSSSEEEEECTTEESTTSCEE
T ss_pred CCCCCCCEEecCCCCceEeCCCCCcCcccccC
Confidence 5688899997 348999999999999874
No 122
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=88.97 E-value=0.21 Score=60.10 Aligned_cols=12 Identities=25% Similarity=0.772 Sum_probs=10.2
Q ss_pred cCccccCCCCCCC
Q 003853 257 KEECDCKYDGLLG 269 (791)
Q Consensus 257 ~g~C~C~~~G~~G 269 (791)
.++|.|. +||.+
T Consensus 371 sy~C~C~-~Gy~l 382 (791)
T 3m0c_C 371 GYKCQCE-EGFQL 382 (791)
T ss_dssp CBCCCCC-SSEEC
T ss_pred CceeecC-CCCEe
Confidence 5799998 99975
No 123
>2i9a_A Urokinase-type plasminogen activator; growth factor-like domain, kringle domain, hydrolase; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 2i9b_A*
Probab=88.91 E-value=0.16 Score=47.84 Aligned_cols=61 Identities=26% Similarity=0.415 Sum_probs=39.7
Q ss_pred CCCCCccccCCcchhhcccccccC-ccccCCCCCCCcccccccccCcCCCCCCCceecCCeeecCCCcccCCCCC
Q 003853 235 NGSKPGWCNVDPEEAYALKVQFKE-ECDCKYDGLLGQFCEVPVSSTCVNQCSGHGHCRGGFCQCDSGWYGVDCSI 308 (791)
Q Consensus 235 ~C~~~G~C~~~~~~~~~~~~c~~g-~C~C~~~G~~G~~Ce~~~~~~C~~~Cs~~G~C~~G~C~C~~G~~G~~C~~ 308 (791)
+|.|+|.|....- .... .|.|+ +||+|.+|++.+...|.. ++|. .+++.+.....|..|+.
T Consensus 14 pC~NGGtC~~~~~-------~s~~~~C~Cp-~g~~G~~Cei~~~~~C~~---g~G~--~YrG~~s~T~sG~~Cq~ 75 (145)
T 2i9a_A 14 DCLNGGTCVSNKY-------FSNIHWCNCP-KKFGGQHCEIDKSKTCYE---GNGH--FYRGKASTDTMGRPCLP 75 (145)
T ss_dssp CCCTTCEEEECSS-------STTCEEEECC-TTEESTTSCEESSCCEEC---TTCT--TCCSCCCBBTTSCBCCC
T ss_pred CCCCCCCcCCCcc-------ccCCccccCC-CCCCCCceeccccccCCC---CCcc--ccccceecCCcCCcccC
Confidence 5889999953200 0022 79999 999999999875444432 2332 44566666777888875
No 124
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=88.84 E-value=0.16 Score=42.38 Aligned_cols=28 Identities=29% Similarity=0.746 Sum_probs=21.7
Q ss_pred CCCCCCCEEecCC----CeeeeCCCCcCCCCCc
Q 003853 125 SDCSGQGVCNHEL----GQCRCFHGFRGKGCSE 153 (791)
Q Consensus 125 ~~Cs~~G~C~~~~----G~C~C~~G~~G~~Ce~ 153 (791)
+.|.+ |+|.... -.|.|++||+|..|+.
T Consensus 46 ~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE~ 77 (79)
T 1xdt_R 46 DFCIH-GECKYVKELRAPSCICHPGYHGERCHG 77 (79)
T ss_dssp TCCSS-EEECCBGGGTBCCEEECTTEESTTCCE
T ss_pred CcCCC-CEeeeecCCCCeEEEcCCCcccccccc
Confidence 67886 5994222 2699999999999986
No 125
>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A
Probab=88.84 E-value=0.14 Score=39.10 Aligned_cols=28 Identities=36% Similarity=0.914 Sum_probs=22.5
Q ss_pred CCCCCCceec------CCeeecCCCcccCCCCCcc
Q 003853 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSIPS 310 (791)
Q Consensus 282 ~~Cs~~G~C~------~G~C~C~~G~~G~~C~~~~ 310 (791)
+-|.+ |+|. ...|+|++||+|..|+...
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~~ 47 (50)
T 1iox_A 14 HYCIK-GRCRFVVAEQTPSCVCDEGYIGARCERVD 47 (50)
T ss_dssp TSCTT-CCEEEETTTTEEEECCCTTEETTTTCEEC
T ss_pred CcccC-CEEEeEcCCCCeEEECCCCcccCCCCeec
Confidence 45777 8895 2489999999999999753
No 126
>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}
Probab=87.94 E-value=0.22 Score=47.35 Aligned_cols=29 Identities=45% Similarity=1.106 Sum_probs=24.9
Q ss_pred CCCCCCceec----CCeeecCCCcccCCCCCcc
Q 003853 282 NQCSGHGHCR----GGFCQCDSGWYGVDCSIPS 310 (791)
Q Consensus 282 ~~Cs~~G~C~----~G~C~C~~G~~G~~C~~~~ 310 (791)
+.|+++|+|. .+.|.|.+||.|..|+...
T Consensus 125 ~~C~~~g~C~~~~~~~~c~C~~g~~g~~C~~~~ 157 (164)
T 3cfw_A 125 WSCSGHGECVEIINNYTCNCDVGYYGPQCQFVQ 157 (164)
T ss_dssp TSSCSSEEEEEETTEEEEEECTTCBSSSSCBC-
T ss_pred CcCCCCCeecccCCCceeeeCCCcccccccccc
Confidence 6799999997 5599999999999998744
No 127
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=87.36 E-value=0.49 Score=51.37 Aligned_cols=94 Identities=12% Similarity=0.055 Sum_probs=67.5
Q ss_pred CchhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC---
Q 003853 627 RSENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL--- 702 (791)
Q Consensus 627 ~~~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i--- 702 (791)
...+..+.|+.+...+.|.- ++++.-++|||++| +|||.++.- ...++++-. ..+.++..+...|.+.|..+
T Consensus 320 ~~~~~~~~~~~adv~v~ps~~e~~~~~~~EAma~G-~Pvi~s~~~--~~~e~~~~~-~g~~~~~~d~~~la~~i~~ll~~ 395 (439)
T 3fro_A 320 SREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLG-AIPIASAVG--GLRDIITNE-TGILVKAGDPGELANAILKALEL 395 (439)
T ss_dssp CHHHHHHHHTTCSEEEECBSCCSSCHHHHHHHHTT-CEEEEESST--HHHHHCCTT-TCEEECTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHCCEEEeCCCCCCccHHHHHHHHCC-CCeEEcCCC--CcceeEEcC-ceEEeCCCCHHHHHHHHHHHHhc
Confidence 34567899999999888865 35677799999999 588888643 233455423 56677777877666666543
Q ss_pred CHHHHHHHHHHHHHHHHhheec
Q 003853 703 NETEIQFRLANVQKVWQRFLYR 724 (791)
Q Consensus 703 ~~~~~~~m~~~~~~~~~~~~~~ 724 (791)
+++...+|.++.++..++|-|.
T Consensus 396 ~~~~~~~~~~~~~~~~~~~s~~ 417 (439)
T 3fro_A 396 SRSDLSKFRENCKKRAMSFSWE 417 (439)
T ss_dssp TTTTTHHHHHHHHHHHHTSCHH
T ss_pred CHHHHHHHHHHHHHHHhhCcHH
Confidence 4667888988888877777654
No 128
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=87.19 E-value=0.25 Score=55.16 Aligned_cols=26 Identities=38% Similarity=1.248 Sum_probs=18.5
Q ss_pred CCCC-CCceecCCeeecCCCcccCCCC
Q 003853 282 NQCS-GHGHCRGGFCQCDSGWYGVDCS 307 (791)
Q Consensus 282 ~~Cs-~~G~C~~G~C~C~~G~~G~~C~ 307 (791)
..|+ ++|+..-|.|.|.+||.|..|+
T Consensus 446 ~~C~~g~G~~~CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 446 HRCNNGNGTFECGVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTTEEEETTEEEECTTC------
T ss_pred cccCCCCeeEeCCceECcCCCCCCCCC
Confidence 4698 8999999999999999999996
No 129
>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}
Probab=87.10 E-value=0.067 Score=50.26 Aligned_cols=29 Identities=17% Similarity=0.327 Sum_probs=20.1
Q ss_pred CCCCCCCccccCCcchhhcccccccCccccCCCCCCCccc
Q 003853 233 TTNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLGQFC 272 (791)
Q Consensus 233 ~~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G~~C 272 (791)
..+|.+ |.|...++ .++|.|+ +||+|..+
T Consensus 9 ~~pC~n-g~C~n~~g---------~y~C~C~-~G~~g~~~ 37 (147)
T 2w86_A 9 SSPCIN-GVCKNSPG---------SFICECS-SESTLDPT 37 (147)
T ss_dssp GCCSBT-SEEEEETT---------EEEEECC-TTEEECTT
T ss_pred CCCCCC-CEeECCCC---------CEEeECC-CCcccCCC
Confidence 456764 68865432 5789998 99997643
No 130
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=86.18 E-value=0.93 Score=48.71 Aligned_cols=92 Identities=20% Similarity=0.228 Sum_probs=65.3
Q ss_pred chhHHHhhccCeEEEeCCCCC--------CchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHH
Q 003853 628 SENYHEDLSSSVFCGVLPGDG--------WSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINIL 699 (791)
Q Consensus 628 ~~~y~~~l~~S~FCl~p~G~~--------~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L 699 (791)
..+..+.|+++.|.|+..-.. ...+++|+|++|. |||+++.-.++ +++.=....+.++ ++.++.+.|
T Consensus 224 ~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~-PVI~~~~~~~~--~~v~~~~~G~~~~--~~~e~~~~i 298 (339)
T 3rhz_A 224 DEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGI-PVIVQEGIANQ--ELIENNGLGWIVK--DVEEAIMKV 298 (339)
T ss_dssp HHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTC-CEEEETTCTTT--HHHHHHTCEEEES--SHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCC-CEEEccChhHH--HHHHhCCeEEEeC--CHHHHHHHH
Confidence 456677888899999972211 1246999999995 99987643322 2233334455554 577888899
Q ss_pred hcCCHHHHHHHHHHHHHHHHhheec
Q 003853 700 RGLNETEIQFRLANVQKVWQRFLYR 724 (791)
Q Consensus 700 ~~i~~~~~~~m~~~~~~~~~~~~~~ 724 (791)
..++++++.+|+++.+++.+.+.+.
T Consensus 299 ~~l~~~~~~~m~~na~~~a~~~~~~ 323 (339)
T 3rhz_A 299 KNVNEDEYIELVKNVRSFNPILRKG 323 (339)
T ss_dssp HHCCHHHHHHHHHHHHHHTHHHHTT
T ss_pred HHhCHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999887776543
No 131
>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A
Probab=86.03 E-value=0.34 Score=36.86 Aligned_cols=27 Identities=37% Similarity=0.898 Sum_probs=20.9
Q ss_pred CCCCCCceec------CCeeecCCCcccCCCCCc
Q 003853 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSIP 309 (791)
Q Consensus 282 ~~Cs~~G~C~------~G~C~C~~G~~G~~C~~~ 309 (791)
+-|.+ |+|. ...|+|.+||+|..|+..
T Consensus 14 ~yC~n-G~C~~~~~~~~~~C~C~~gy~G~RCe~~ 46 (50)
T 3e50_C 14 QFCFH-GTCRFLVQEDKPACVCHSGYVGARCEHA 46 (50)
T ss_pred CcccC-CEEeeccCCCCeEEECCCCCcccCCCce
Confidence 34665 4885 348999999999999874
No 132
>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}
Probab=85.96 E-value=0.36 Score=36.73 Aligned_cols=26 Identities=31% Similarity=0.939 Sum_probs=20.6
Q ss_pred CCCCCCceec------CCeeecCCCcccCCCCC
Q 003853 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSI 308 (791)
Q Consensus 282 ~~Cs~~G~C~------~G~C~C~~G~~G~~C~~ 308 (791)
+-|.+ |+|. ...|+|++||+|..|+.
T Consensus 18 ~yC~n-G~C~~i~~~~~~~C~C~~gy~G~RCe~ 49 (50)
T 2rnl_A 18 NFCIH-GECKYIEHLEAVTCKCQQEYFGERCGE 49 (50)
T ss_dssp GTCSS-SEEEEETTTTEEEEECCSSCCSSSCCC
T ss_pred CcCCC-CEEEEecCCCCeeEECCCCcccccccc
Confidence 45664 6996 23799999999999986
No 133
>3t3p_B Integrin beta-3; integrin, cell adhesion, blood clotting, fibrinogen, platele; HET: NAG BMA MAN; 2.20A {Homo sapiens} PDB: 3t3m_B* 3nig_B* 3nif_B* 3nid_B* 2vdr_B* 2vc2_B* 2vdk_B* 2vdm_B* 2vdn_B* 2vdl_B* 2vdp_B* 2vdq_B* 2vdo_B* 3fcu_B* 1txv_B* 1ty3_B* 1ty5_B* 1ty6_B* 1ty7_B* 1tye_B*
Probab=85.13 E-value=0.39 Score=53.63 Aligned_cols=25 Identities=40% Similarity=1.019 Sum_probs=17.8
Q ss_pred CCC-CCCEEecCCCeeeeCCCCcCCCCC
Q 003853 126 DCS-GQGVCNHELGQCRCFHGFRGKGCS 152 (791)
Q Consensus 126 ~Cs-~~G~C~~~~G~C~C~~G~~G~~Ce 152 (791)
.|+ ++|+.. .|.|.|.+||.|..||
T Consensus 447 ~C~~g~G~~~--CG~C~C~~G~~G~~Ce 472 (472)
T 3t3p_B 447 RCNNGNGTFE--CGVCRCGPGWLGSQCE 472 (472)
T ss_dssp TTTTTTEEEE--TTEEEECTTC------
T ss_pred ccCCCCeeEe--CCceECcCCCCCCCCC
Confidence 698 899998 9999999999999996
No 134
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=85.04 E-value=0.69 Score=50.14 Aligned_cols=93 Identities=10% Similarity=0.061 Sum_probs=61.2
Q ss_pred chhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcE---------------EE--EecC
Q 003853 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESF---------------VV--RISE 689 (791)
Q Consensus 628 ~~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~---------------sv--~i~~ 689 (791)
..+..+.|+.+.+.+.|.- ++++.-++|||.+|+ |||.++.-- +.++++-..- .+ .++.
T Consensus 264 ~~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~~g--~~e~v~~~~~~~i~~~~~~~~~~~~G~~gl~~~ 340 (413)
T 3oy2_A 264 DERVDMMYNACDVIVNCSSGEGFGLCSAEGAVLGK-PLIISAVGG--ADDYFSGDCVYKIKPSAWISVDDRDGIGGIEGI 340 (413)
T ss_dssp HHHHHHHHHHCSEEEECCSCCSSCHHHHHHHTTTC-CEEEECCHH--HHHHSCTTTSEEECCCEEEECTTTCSSCCEEEE
T ss_pred HHHHHHHHHhCCEEEeCCCcCCCCcHHHHHHHcCC-CEEEcCCCC--hHHHHccCcccccccccccccccccCcceeeCC
Confidence 3567889999999988764 466778999999995 999887422 2222221111 33 4555
Q ss_pred CChhhHHHHHhcC--CHHHHHHHHHHHHHHH-Hhheec
Q 003853 690 DEIPNLINILRGL--NETEIQFRLANVQKVW-QRFLYR 724 (791)
Q Consensus 690 ~~~~~l~~~L~~i--~~~~~~~m~~~~~~~~-~~~~~~ 724 (791)
.+...|.+.| .+ .++...+|.++.++.. ++|-|.
T Consensus 341 ~d~~~la~~i-~l~~~~~~~~~~~~~a~~~~~~~fs~~ 377 (413)
T 3oy2_A 341 IDVDDLVEAF-TFFKDEKNRKEYGKRVQDFVKTKPTWD 377 (413)
T ss_dssp CCHHHHHHHH-HHTTSHHHHHHHHHHHHHHHTTSCCHH
T ss_pred CCHHHHHHHH-HHhcCHHHHHHHHHHHHHHHHHhCCHH
Confidence 5666666655 43 5667788888887765 566554
No 135
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=84.28 E-value=0.97 Score=50.53 Aligned_cols=94 Identities=7% Similarity=0.069 Sum_probs=64.5
Q ss_pred chhHHHhhccC----eEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC
Q 003853 628 SENYHEDLSSS----VFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL 702 (791)
Q Consensus 628 ~~~y~~~l~~S----~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i 702 (791)
..+..+.|+.+ ...+.|.- ++++.-++|||.+|+ |||.++.- ...+++.-....+.++..+...|.+.|..+
T Consensus 345 ~~~~~~~~~~a~~~~dv~v~pS~~Eg~~~~~lEAma~G~-PvI~s~~~--g~~e~v~~~~~g~l~~~~d~~~la~~i~~l 421 (499)
T 2r60_A 345 QQELAGCYAYLASKGSVFALTSFYEPFGLAPVEAMASGL-PAVVTRNG--GPAEILDGGKYGVLVDPEDPEDIARGLLKA 421 (499)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCSCBCCCSHHHHHHHTTC-CEEEESSB--HHHHHTGGGTSSEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcCCCEEEECcccCCCCcHHHHHHHcCC-CEEEecCC--CHHHHhcCCceEEEeCCCCHHHHHHHHHHH
Confidence 35678889999 87777753 366777999999997 88888742 233445444455667777777666555443
Q ss_pred --CHHHHHHHHHHHHHHHHh-heec
Q 003853 703 --NETEIQFRLANVQKVWQR-FLYR 724 (791)
Q Consensus 703 --~~~~~~~m~~~~~~~~~~-~~~~ 724 (791)
.++...+|.++.++.... |-|.
T Consensus 422 l~~~~~~~~~~~~a~~~~~~~fs~~ 446 (499)
T 2r60_A 422 FESEETWSAYQEKGKQRVEERYTWQ 446 (499)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHSBHH
T ss_pred HhCHHHHHHHHHHHHHHHHHhCCHH
Confidence 567788888888766554 7664
No 136
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=84.23 E-value=1.6 Score=47.31 Aligned_cols=91 Identities=9% Similarity=0.012 Sum_probs=60.8
Q ss_pred hhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC--CHH
Q 003853 629 ENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL--NET 705 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i--~~~ 705 (791)
.+..+.|+.+...+.|.- .+++.-++|||.+|+ |||.++.-- ..+++.=....+.++ +...|.+.|..+ .++
T Consensus 307 ~~~~~~~~~ad~~v~ps~~E~~~~~~lEAma~G~-PvI~~~~~g--~~e~i~~~~~g~l~~--d~~~la~~i~~ll~~~~ 381 (416)
T 2x6q_A 307 REVNAFQRASDVILQMSIREGFGLTVTEAMWKGK-PVIGRAVGG--IKFQIVDGETGFLVR--DANEAVEVVLYLLKHPE 381 (416)
T ss_dssp HHHHHHHHHCSEEEECCSSCSSCHHHHHHHHTTC-CEEEESCHH--HHHHCCBTTTEEEES--SHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHhCCEEEECCCcCCCccHHHHHHHcCC-CEEEccCCC--ChhheecCCCeEEEC--CHHHHHHHHHHHHhCHH
Confidence 367888999998887753 456777999999997 888887522 233443344455555 655555555443 677
Q ss_pred HHHHHHHHHHHHH-Hhheec
Q 003853 706 EIQFRLANVQKVW-QRFLYR 724 (791)
Q Consensus 706 ~~~~m~~~~~~~~-~~~~~~ 724 (791)
...+|.++.++.. ++|-|.
T Consensus 382 ~~~~~~~~a~~~~~~~fs~~ 401 (416)
T 2x6q_A 382 VSKEMGAKAKERVRKNFIIT 401 (416)
T ss_dssp HHHHHHHHHHHHHHHHTBHH
T ss_pred HHHHHHHHHHHHHHHHcCHH
Confidence 7888888887655 467554
No 137
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=83.69 E-value=0.55 Score=51.66 Aligned_cols=34 Identities=35% Similarity=0.928 Sum_probs=28.3
Q ss_pred CCC-CCCCCCCCEEecCCC--eeeeCC-CCcCCCCCcc
Q 003853 121 KSC-KSDCSGQGVCNHELG--QCRCFH-GFRGKGCSER 154 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~~-G~~G~~Ce~~ 154 (791)
..| +++|.++|+|....+ .|.|+. ||+|+.|+..
T Consensus 186 ~~C~~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 186 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp SCCCTTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred CCcccccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 578 678999999985433 799996 9999999975
No 138
>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1
Probab=83.57 E-value=0.45 Score=39.75 Aligned_cols=27 Identities=30% Similarity=0.796 Sum_probs=21.1
Q ss_pred CCCCCCceec------CCeeecCCCcccCCCCCc
Q 003853 282 NQCSGHGHCR------GGFCQCDSGWYGVDCSIP 309 (791)
Q Consensus 282 ~~Cs~~G~C~------~G~C~C~~G~~G~~C~~~ 309 (791)
+.|.+ |+|. ...|.|.+||+|..|+..
T Consensus 46 ~yCln-G~C~~i~~~~~~~C~C~~GYtG~RCE~l 78 (79)
T 1xdt_R 46 DFCIH-GECKYVKELRAPSCICHPGYHGERCHGL 78 (79)
T ss_dssp TCCSS-EEECCBGGGTBCCEEECTTEESTTCCEE
T ss_pred CcCCC-CEeeeecCCCCeEEEcCCCccccccccc
Confidence 45765 5894 347999999999999863
No 139
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=83.49 E-value=0.44 Score=54.10 Aligned_cols=33 Identities=33% Similarity=0.840 Sum_probs=28.9
Q ss_pred CCCC-----CCCCCCCEEecCCCeeeeCCCCcCCCCCcc
Q 003853 121 KSCK-----SDCSGQGVCNHELGQCRCFHGFRGKGCSER 154 (791)
Q Consensus 121 ~~C~-----~~Cs~~G~C~~~~G~C~C~~G~~G~~Ce~~ 154 (791)
..|+ ..|+++|+|++ .+.|.|.+||..++|+..
T Consensus 445 ~~C~~~~~~~~C~~~GVCNn-~~~CHC~~GwaPP~C~~~ 482 (510)
T 3g5c_A 445 STCLSSKEGTICSGNGVCSN-ELKCVCNRHWIGSDCNTY 482 (510)
T ss_dssp CCCCCSSTTCSGGGTEEEBT-TSCEEECTTEESTTSCEE
T ss_pred cCCCCcccccccCCCCeeCC-CCCcCCCCCCCCCCCCCC
Confidence 4784 36999999995 789999999999999986
No 140
>1g1t_A E-selectin; EGF, adhesion molecule, SLEX, immune system, membrane protein; HET: SIA GAL MAG FUC; 1.50A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1esl_A
Probab=82.91 E-value=0.3 Score=45.93 Aligned_cols=28 Identities=43% Similarity=1.076 Sum_probs=23.6
Q ss_pred CCCCCCceecC----CeeecCCCcccCCCCCc
Q 003853 282 NQCSGHGHCRG----GFCQCDSGWYGVDCSIP 309 (791)
Q Consensus 282 ~~Cs~~G~C~~----G~C~C~~G~~G~~C~~~ 309 (791)
++|.++|.|.. ..|.|.+||.|..|++.
T Consensus 125 ~pc~~~g~C~~~~~~~~c~C~~g~~g~~Ce~~ 156 (157)
T 1g1t_A 125 TSCSGHGECVETINNYTCKCDPGFSGLKCEQI 156 (157)
T ss_dssp TGGGGSEEEEEETTEEEEEECTTEESTTSCEE
T ss_pred CCCCCCCEeecCCCCeeEECCCCccCcccccc
Confidence 56888899973 38999999999999863
No 141
>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}
Probab=81.78 E-value=0.84 Score=50.07 Aligned_cols=59 Identities=20% Similarity=0.443 Sum_probs=38.4
Q ss_pred ccCCCceeeccCCCcccccccCc--ccCCCC-CCCCCCCCE-Ee------------------cCCCeee-eCCCCcCCCC
Q 003853 95 KAEIGRWLSGCDSVAKEVDLVEM--IGGKSC-KSDCSGQGV-CN------------------HELGQCR-CFHGFRGKGC 151 (791)
Q Consensus 95 ~~~~g~~~~~~~~~~~~~~~~~~--~~~~~C-~~~Cs~~G~-C~------------------~~~G~C~-C~~G~~G~~C 151 (791)
..+.|.-|..|..+....++... .....| +-+|++++. |. ..+|+|. |.++++|.+|
T Consensus 292 hnT~G~~CErC~pGy~g~p~~~at~~~~~~C~pC~Cnghs~~C~~d~~~~~~~~s~~~~~~~~~~G~C~~C~~nt~G~~C 371 (403)
T 2y38_A 292 HNTCGGSCDRCCPGFNQQPWKPATTDSANECQSCNCHGHAYDCYYDPEVDRREASQNQDNVYQGGGVCLDCQHHTTGINC 371 (403)
T ss_dssp TTEESSSCCEECTTCCSSCCCCCCSSCCCCCCCCCCTTSCSCEEECHHHHHTTCCCCTTSCSCCCEEESSCCSSEESTTS
T ss_pred CcCcCCCCCCCCccccCCcccccccCCCccccccccCCCCcccccCcccccccccccccccCCCCCCCCCCcCcCcCCCC
Confidence 44566666666655554433211 123577 667888875 73 2367996 9999999999
Q ss_pred Cc
Q 003853 152 SE 153 (791)
Q Consensus 152 e~ 153 (791)
+.
T Consensus 372 Er 373 (403)
T 2y38_A 372 ER 373 (403)
T ss_dssp CE
T ss_pred Cc
Confidence 86
No 142
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=81.17 E-value=0.34 Score=54.33 Aligned_cols=29 Identities=38% Similarity=0.889 Sum_probs=0.0
Q ss_pred CCCC-CCceecCCeeecCCCcccCCCCCcc
Q 003853 282 NQCS-GHGHCRGGFCQCDSGWYGVDCSIPS 310 (791)
Q Consensus 282 ~~Cs-~~G~C~~G~C~C~~G~~G~~C~~~~ 310 (791)
..|+ ++|+..-|.|.|.+||.|..|+-..
T Consensus 467 ~~C~~g~G~~~CG~C~C~~G~~G~~CeC~~ 496 (503)
T 3v4v_B 467 PHCSDGQGHLQCGVCSCAPGRLGRLCESRG 496 (503)
T ss_dssp ------------------------------
T ss_pred cccCCCCeeEeCCceECcCCCcCCCCCCCC
Confidence 4687 8999999999999999999998643
No 143
>3g5c_A ADAM 22; alpha/beta fold, cross-linked domain, cell adhesion, cleavag of basic residues, EGF-like domain, glycoprotein, membrane, phosphoprotein; HET: NAG; 2.36A {Homo sapiens}
Probab=80.85 E-value=0.51 Score=53.52 Aligned_cols=30 Identities=37% Similarity=0.861 Sum_probs=26.6
Q ss_pred CCCCCCceec-CCeeecCCCcccCCCCCccc
Q 003853 282 NQCSGHGHCR-GGFCQCDSGWYGVDCSIPSV 311 (791)
Q Consensus 282 ~~Cs~~G~C~-~G~C~C~~G~~G~~C~~~~~ 311 (791)
..|++||.|. .+.|+|.+||.+++|+.+..
T Consensus 454 ~~C~~~GVCNn~~~CHC~~GwaPP~C~~~~~ 484 (510)
T 3g5c_A 454 TICSGNGVCSNELKCVCNRHWIGSDCNTYFP 484 (510)
T ss_dssp CSGGGTEEEBTTSCEEECTTEESTTSCEECC
T ss_pred cccCCCCeeCCCCCcCCCCCCCCCCCCCCCC
Confidence 4699999998 67899999999999998654
No 144
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=80.09 E-value=2.6 Score=46.75 Aligned_cols=90 Identities=8% Similarity=-0.011 Sum_probs=60.0
Q ss_pred hhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCC---------cEEEEecCCChhhHHHH
Q 003853 629 ENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYE---------SFVVRISEDEIPNLINI 698 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~---------~~sv~i~~~~~~~l~~~ 698 (791)
....+.|+.+...+.|.- .+++.-++|||.+|+ |||.++.- .+.+++.-. ...+.++..+...|.+.
T Consensus 358 ~~~~~~~~~adv~v~pS~~E~~g~~~lEAma~G~-PvI~s~~g--g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~ 434 (485)
T 2qzs_A 358 AFSHRIMGGADVILVPSRFEPCGLTQLYGLKYGT-LPLVRRTG--GLADTVSDCSLENLADGVASGFVFEDSNAWSLLRA 434 (485)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSH--HHHHHCCBCCHHHHHTTCCCBEEECSSSHHHHHHH
T ss_pred HHHHHHHHhCCEEEECCccCCCcHHHHHHHHCCC-CEEECCCC--CccceeccCccccccccccceEEECCCCHHHHHHH
Confidence 344688999998888764 456777999999995 77777642 233444433 55677787787766665
Q ss_pred HhcC-----CHHHHHHHHHHHHHHHHhhee
Q 003853 699 LRGL-----NETEIQFRLANVQKVWQRFLY 723 (791)
Q Consensus 699 L~~i-----~~~~~~~m~~~~~~~~~~~~~ 723 (791)
|..+ .++...+|.++.++ ++|-|
T Consensus 435 i~~ll~~~~~~~~~~~~~~~~~~--~~fs~ 462 (485)
T 2qzs_A 435 IRRAFVLWSRPSLWRFVQRQAMA--MDFSW 462 (485)
T ss_dssp HHHHHHHHTSHHHHHHHHHHHHH--CCCCH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHh--hcCCH
Confidence 5543 56667777777653 45544
No 145
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=79.98 E-value=1.8 Score=45.55 Aligned_cols=72 Identities=15% Similarity=0.071 Sum_probs=52.3
Q ss_pred hhHHHhhccCeEEEeCCC-----------CCCchhHHHHHhhCCeeEEEecccccCCcccCCC--CcEEEEecCCChhhH
Q 003853 629 ENYHEDLSSSVFCGVLPG-----------DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNY--ESFVVRISEDEIPNL 695 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G-----------~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw--~~~sv~i~~~~~~~l 695 (791)
.+..+.|+.+...+.|.- ++++.-++|||.+|+ |||.++. -...+++.- ....+.++. +...|
T Consensus 223 ~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~-PvI~s~~--~~~~e~~~~~~~~~g~~~~~-d~~~l 298 (342)
T 2iuy_A 223 ERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGT-PVVGTGN--GCLAEIVPSVGEVVGYGTDF-APDEA 298 (342)
T ss_dssp HHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTC-CEEECCT--TTHHHHGGGGEEECCSSSCC-CHHHH
T ss_pred HHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCC-CEEEcCC--CChHHHhcccCCCceEEcCC-CHHHH
Confidence 456889999999888864 456777999999996 8888875 224445544 445556676 88888
Q ss_pred HHHHhcCCH
Q 003853 696 INILRGLNE 704 (791)
Q Consensus 696 ~~~L~~i~~ 704 (791)
.+.|..+-.
T Consensus 299 ~~~i~~l~~ 307 (342)
T 2iuy_A 299 RRTLAGLPA 307 (342)
T ss_dssp HHHHHTSCC
T ss_pred HHHHHHHHH
Confidence 888877754
No 146
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=78.32 E-value=2.9 Score=46.26 Aligned_cols=90 Identities=10% Similarity=-0.061 Sum_probs=59.0
Q ss_pred hhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCC---------cEEEEecCCChhhHHHH
Q 003853 629 ENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYE---------SFVVRISEDEIPNLINI 698 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~---------~~sv~i~~~~~~~l~~~ 698 (791)
....+.|+.+.+.+.|.- .+++.-++|||.+|+ |||.++.- ...+++.=. ...+.++..+...|.+.
T Consensus 357 ~~~~~~~~~adv~v~pS~~E~~~~~~lEAma~G~-PvI~s~~g--g~~e~v~~~~~~~~~~~~~~G~l~~~~d~~~la~~ 433 (485)
T 1rzu_A 357 PLSHLMQAGCDAIIIPSRFEPCGLTQLYALRYGC-IPVVARTG--GLADTVIDANHAALASKAATGVQFSPVTLDGLKQA 433 (485)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCSHHHHHHHHTC-EEEEESSH--HHHHHCCBCCHHHHHTTCCCBEEESSCSHHHHHHH
T ss_pred HHHHHHHhcCCEEEECcccCCCCHHHHHHHHCCC-CEEEeCCC--ChhheecccccccccccCCcceEeCCCCHHHHHHH
Confidence 344688999999888765 456777999999996 77777642 223444333 45667777787766665
Q ss_pred HhcC-----CHHHHHHHHHHHHHHHHhhee
Q 003853 699 LRGL-----NETEIQFRLANVQKVWQRFLY 723 (791)
Q Consensus 699 L~~i-----~~~~~~~m~~~~~~~~~~~~~ 723 (791)
|..+ .++...+|.++.++ ++|-|
T Consensus 434 i~~ll~~~~~~~~~~~~~~~~~~--~~fs~ 461 (485)
T 1rzu_A 434 IRRTVRYYHDPKLWTQMQKLGMK--SDVSW 461 (485)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHT--CCCBH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHH--HhCCh
Confidence 5543 56667777776653 44443
No 147
>3v4v_B Integrin beta-7; cell adhesion, madcam-1, membrane; HET: NAG BMA MAN 0DU; 3.10A {Homo sapiens} PDB: 3v4p_B*
Probab=77.32 E-value=0.48 Score=53.17 Aligned_cols=26 Identities=42% Similarity=0.874 Sum_probs=0.0
Q ss_pred CCC-CCCEEecCCCeeeeCCCCcCCCCCc
Q 003853 126 DCS-GQGVCNHELGQCRCFHGFRGKGCSE 153 (791)
Q Consensus 126 ~Cs-~~G~C~~~~G~C~C~~G~~G~~Ce~ 153 (791)
.|+ ++|+.. .|.|.|.+||.|..||-
T Consensus 468 ~C~~g~G~~~--CG~C~C~~G~~G~~CeC 494 (503)
T 3v4v_B 468 HCSDGQGHLQ--CGVCSCAPGRLGRLCES 494 (503)
T ss_dssp -----------------------------
T ss_pred ccCCCCeeEe--CCceECcCCCcCCCCCC
Confidence 586 788887 99999999999999984
No 148
>3asi_A Neurexin-1-alpha; beta-sandwich, cell adhesion, synapse maturation, neuroligin glycosylation, membrane; HET: NAG; 2.30A {Bos taurus}
Probab=74.53 E-value=1.5 Score=48.06 Aligned_cols=29 Identities=34% Similarity=0.809 Sum_probs=25.0
Q ss_pred CCCCCCCceec----CCeeecCC-CcccCCCCCc
Q 003853 281 VNQCSGHGHCR----GGFCQCDS-GWYGVDCSIP 309 (791)
Q Consensus 281 ~~~Cs~~G~C~----~G~C~C~~-G~~G~~C~~~ 309 (791)
.++|.++|+|. ...|.|+. ||.|..|+..
T Consensus 190 ~~pC~n~g~C~~~~~~~~C~C~~~~~~G~~C~~~ 223 (410)
T 3asi_A 190 EDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 223 (410)
T ss_dssp TTSSSTTCEEEECSSSEEEECTTTSEESTTSCEE
T ss_pred cccCCCCCEecCCCCCceEeccCCcccCCCCCCC
Confidence 46899999997 45899996 9999999974
No 149
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=72.59 E-value=1.9 Score=47.32 Aligned_cols=71 Identities=20% Similarity=0.071 Sum_probs=51.5
Q ss_pred chhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC
Q 003853 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL 702 (791)
Q Consensus 628 ~~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i 702 (791)
..+..+.|+.+...+.|.- .+++.-++|||++|+ |||.++. - ..++++-..-.+.++..+...|.+.|..+
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~~lEAmA~G~-PVV~~~~-g--~~e~v~~~~~G~lv~~~d~~~la~ai~~l 376 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYPPLEMAHFGL-RVITNKY-E--NKDLSNWHSNIVSLEQLNPENIAETLVEL 376 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSHHHHHHHTTC-EEEEECB-T--TBCGGGTBTTEEEESSCSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcHHHHHHhCCC-cEEEeCC-C--cchhhhcCCCEEEeCCCCHHHHHHHHHHH
Confidence 4577899999998887753 466667899999997 7777554 2 23566555667788888887777666554
No 150
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=71.24 E-value=1.3 Score=46.23 Aligned_cols=33 Identities=27% Similarity=0.838 Sum_probs=25.1
Q ss_pred CCCC---CCCCCCCCEEecCCC--eeeeCCCCcC--CCCC
Q 003853 120 GKSC---KSDCSGQGVCNHELG--QCRCFHGFRG--KGCS 152 (791)
Q Consensus 120 ~~~C---~~~Cs~~G~C~~~~G--~C~C~~G~~G--~~Ce 152 (791)
.++| ..+|..++.|.+..| .|.|++||.| ..|.
T Consensus 5 iDEC~~~~~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 5 QQTCANNRHQCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp --CHHHHGGGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred chhccCCCCCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 3778 468999999987777 7999999985 4454
No 151
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=69.98 E-value=2.5 Score=53.42 Aligned_cols=34 Identities=35% Similarity=0.938 Sum_probs=28.2
Q ss_pred CCC-CCCCCCCCEEecCCC--eeeeC-CCCcCCCCCcc
Q 003853 121 KSC-KSDCSGQGVCNHELG--QCRCF-HGFRGKGCSER 154 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~-~G~~G~~Ce~~ 154 (791)
..| +++|.++|+|...-+ .|.|+ +||+|+.|+..
T Consensus 1018 ~~C~~~pC~ngG~C~~~~~~~~C~C~~~g~~G~~C~~~ 1055 (1245)
T 3qcw_A 1018 TTCQEDSCSNQGVCLQQWDGFSCDCSMTSFSGPLCNDP 1055 (1245)
T ss_dssp CCCCTTSSSSSCEEEEETTEEEEECTTSSCBSTTSCBC
T ss_pred CceECCcCCCCCEeCCCCCCCEEECCCCCCCCCCccCC
Confidence 578 788999999975333 79999 69999999974
No 152
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=69.92 E-value=8.1 Score=43.40 Aligned_cols=91 Identities=14% Similarity=-0.024 Sum_probs=61.1
Q ss_pred chhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCC----eeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhc-
Q 003853 628 SENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGC----IPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRG- 701 (791)
Q Consensus 628 ~~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GC----IPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~- 701 (791)
..+....++.+.-+++|.= +|+..-..|||.+|. -|||+++.-=. .++|+ -++.|+..|...|.+.|..
T Consensus 342 ~~el~~ly~~ADv~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~--~~~l~---~g~lv~p~d~~~lA~ai~~l 416 (482)
T 1uqt_A 342 RKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAGA--ANELT---SALIVNPYDRDEVAAALDRA 416 (482)
T ss_dssp HHHHHHHHHHCSEEEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBGG--GGTCT---TSEEECTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHccEEEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCCC--HHHhC---CeEEECCCCHHHHHHHHHHH
Confidence 4577889999998887754 577777999999998 68999873221 22333 3567787777655444432
Q ss_pred --CCHHHHHHHHHHHHHHHHhhee
Q 003853 702 --LNETEIQFRLANVQKVWQRFLY 723 (791)
Q Consensus 702 --i~~~~~~~m~~~~~~~~~~~~~ 723 (791)
.++++.++|.++.++...+|-+
T Consensus 417 L~~~~~~r~~~~~~~~~~v~~~s~ 440 (482)
T 1uqt_A 417 LTMSLAERISRHAEMLDVIVKNDI 440 (482)
T ss_dssp HTCCHHHHHHHHHHHHHHHHHTCH
T ss_pred HcCCHHHHHHHHHHHHHHHHhCCH
Confidence 3566677777777665556543
No 153
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=67.43 E-value=1.8 Score=49.57 Aligned_cols=63 Identities=27% Similarity=0.507 Sum_probs=36.5
Q ss_pred CCCCCCEEecCCCeeeeCCCCcCC--CCCccccCCCCCCCCC-CCCCCCcccccCCCCCCC---CCCeeeeCCCcc
Q 003853 126 DCSGQGVCNHELGQCRCFHGFRGK--GCSERIHFQCNFPKTP-ELPYGRWVVSICPTHCDT---TRAMCFCGEGTK 195 (791)
Q Consensus 126 ~Cs~~G~C~~~~G~C~C~~G~~G~--~Ce~~~~~~C~~~~~~-~~~~g~~~~~~C~g~C~~---~~g~C~C~~G~~ 195 (791)
-|+..|.+..-.|+|.|.+||.+. .|+. |..+... ....+.| ..|+.+... ....|.|..||.
T Consensus 251 ~C~~dG~w~~p~G~C~C~~G~e~~~~~C~a-----C~~g~~k~~~~~~~C--~~CP~~S~s~~~Gs~~C~C~ng~~ 319 (536)
T 3fl7_A 251 HCAVDGEWLVPIGQCLCQAGYEKVEDACQA-----CSPGFFKFEASESPC--LECPEHTLPSPEGATSCECEEGFF 319 (536)
T ss_dssp EECTTSCBCCCBCCCEECTTEEEETTEEEE-----CCTTEECCSCCSSCC--EECCSSEECCCTTCSSCEECTTCB
T ss_pred EEcCCCCEecccCcEeccCccccCCceeee-----cCCCCCcccCCCCcc--ccCCCCCCCCCCCccEEEEecccc
Confidence 499999997778999999999843 4443 5433110 0011122 245543322 134788888775
No 154
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=63.29 E-value=5.8 Score=34.43 Aligned_cols=66 Identities=23% Similarity=0.459 Sum_probs=42.5
Q ss_pred CCCCCCccccCCcchhhcccccccCccccCCCCCCC--cccccccccCcCC---CCCCCceec---C------CeeecCC
Q 003853 234 TNGSKPGWCNVDPEEAYALKVQFKEECDCKYDGLLG--QFCEVPVSSTCVN---QCSGHGHCR---G------GFCQCDS 299 (791)
Q Consensus 234 ~~C~~~G~C~~~~~~~~~~~~c~~g~C~C~~~G~~G--~~Ce~~~~~~C~~---~Cs~~G~C~---~------G~C~C~~ 299 (791)
..|..++.|-.... ...+|.|. +||.| ..|.......|.. .|.-+.+|. . -.|.|.+
T Consensus 10 ~~C~~NA~C~r~~~--------g~e~C~C~-~gy~gdg~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~C~~ 80 (99)
T 1ob1_C 10 KQCPQNSGCFRHLD--------EREECKCL-LNYKQEGDKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCECTK 80 (99)
T ss_dssp CCCCTTEEEECCTT--------SCCEEEEC-TTEEEETTEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEEECS
T ss_pred CCCCCCCCeEEcCC--------CCEEEEec-CCeecCCCeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeEeCC
Confidence 45677777854211 15689998 99985 4565543345652 488888885 2 2799999
Q ss_pred Cc-----ccCCCCC
Q 003853 300 GW-----YGVDCSI 308 (791)
Q Consensus 300 G~-----~G~~C~~ 308 (791)
|+ .|..|+.
T Consensus 81 g~~~~~~~gvf~~~ 94 (99)
T 1ob1_C 81 PDSYPLFDGIFCSH 94 (99)
T ss_dssp TTCCEEGGGTEECC
T ss_pred CCcccceeEEEecc
Confidence 84 4666653
No 155
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=62.51 E-value=8.9 Score=46.04 Aligned_cols=92 Identities=4% Similarity=-0.081 Sum_probs=60.6
Q ss_pred hHHHhhcc-CeEEEeCC-CCCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhc------
Q 003853 630 NYHEDLSS-SVFCGVLP-GDGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRG------ 701 (791)
Q Consensus 630 ~y~~~l~~-S~FCl~p~-G~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~------ 701 (791)
+..+.|++ +...+.|. -.+++.-++|||.+|+ |||.++.-- ..++|.-....+.++..+...|.+.|..
T Consensus 656 eL~~~~~~aaDvfV~PS~~EgfglvllEAMA~G~-PVIasd~GG--~~EiV~dg~~Gllv~p~D~e~LA~aI~~lL~~Ll 732 (816)
T 3s28_A 656 ELYRYICDTKGAFVQPALYEAFGLTVVEAMTCGL-PTFATCKGG--PAEIIVHGKSGFHIDPYHGDQAADTLADFFTKCK 732 (816)
T ss_dssp HHHHHHHHTTCEEEECCSCBSSCHHHHHHHHTTC-CEEEESSBT--HHHHCCBTTTBEEECTTSHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCeEEEECCCccCccHHHHHHHHcCC-CEEEeCCCC--hHHHHccCCcEEEeCCCCHHHHHHHHHHHHHHhc
Confidence 45566664 44555554 3466777999999996 888876422 2344544555677888787766555532
Q ss_pred CCHHHHHHHHHHHHHHH-Hhheec
Q 003853 702 LNETEIQFRLANVQKVW-QRFLYR 724 (791)
Q Consensus 702 i~~~~~~~m~~~~~~~~-~~~~~~ 724 (791)
-.++...+|.++.++.. ++|-|.
T Consensus 733 ~d~~~~~~m~~~ar~~a~~~fSwe 756 (816)
T 3s28_A 733 EDPSHWDEISKGGLQRIEEKYTWQ 756 (816)
T ss_dssp HCTHHHHHHHHHHHHHHHHSCCHH
T ss_pred cCHHHHHHHHHHHHHHHHHhCCHH
Confidence 25677888888887755 778775
No 156
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=59.26 E-value=1.5 Score=46.70 Aligned_cols=78 Identities=13% Similarity=0.075 Sum_probs=49.3
Q ss_pred hhHHHhhccCeEEEeCCCCCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC--CHHH
Q 003853 629 ENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL--NETE 706 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i--~~~~ 706 (791)
.+..+.|+.+...+.|.|. . ++|||.+|+ |||.++..- ...++++-. ..+.++. +...|.+.|..+ .++.
T Consensus 274 ~~~~~~~~~ad~~v~~Sg~--~--~lEA~a~G~-PvI~~~~~~-~~~e~v~~g-~g~lv~~-d~~~la~~i~~ll~d~~~ 345 (384)
T 1vgv_A 274 LPFVWLMNHAWLILTDSGG--I--QEEAPSLGK-PVLVMRDTT-ERPEAVTAG-TVRLVGT-DKQRIVEEVTRLLKDENE 345 (384)
T ss_dssp HHHHHHHHHCSEEEESSST--G--GGTGGGGTC-CEEEESSCC-SCHHHHHHT-SEEEECS-SHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHhCcEEEECCcc--h--HHHHHHcCC-CEEEccCCC-CcchhhhCC-ceEEeCC-CHHHHHHHHHHHHhChHH
Confidence 5678899999987777632 2 789999996 999987521 123344333 5566655 655555555443 4555
Q ss_pred HHHHHHHH
Q 003853 707 IQFRLANV 714 (791)
Q Consensus 707 ~~~m~~~~ 714 (791)
..+|.++.
T Consensus 346 ~~~~~~~~ 353 (384)
T 1vgv_A 346 YQAMSRAH 353 (384)
T ss_dssp HHHHHSSC
T ss_pred Hhhhhhcc
Confidence 66665543
No 157
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=59.04 E-value=14 Score=41.69 Aligned_cols=82 Identities=13% Similarity=0.103 Sum_probs=53.8
Q ss_pred hhHHHhhccCeEEEeCCCCCCchhHHHHHhhCCeeEEE-------eccc-------ccCCcccCCCCcEEEEecCCChhh
Q 003853 629 ENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVI-------QDGI-------FLPYENVLNYESFVVRISEDEIPN 694 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G~~~s~R~~dal~~GCIPVii-------~d~~-------~lPf~~~idw~~~sv~i~~~~~~~ 694 (791)
.++.+.|+.+...+.|.-.+++.-+.|||.+|+ |||. ++.- -+ .++|.- +...
T Consensus 445 ~~~~~~~~~adv~v~ps~~~~g~~~lEAma~G~-Pvv~~~g~~~~s~~~~~~l~~~g~--~e~v~~----------~~~~ 511 (568)
T 2vsy_A 445 PQYLARYRHADLFLDTHPYNAHTTASDALWTGC-PVLTTPGETFAARVAGSLNHHLGL--DEMNVA----------DDAA 511 (568)
T ss_dssp HHHHHHGGGCSEEECCSSSCCSHHHHHHHHTTC-CEEBCCCSSGGGSHHHHHHHHHTC--GGGBCS----------SHHH
T ss_pred HHHHHHHhcCCEEeeCCCCCCcHHHHHHHhCCC-CEEeccCCCchHHHHHHHHHHCCC--hhhhcC----------CHHH
Confidence 478899999998888765566777999999995 9999 5533 22 222211 4443
Q ss_pred HHHHHhcC--CHHHHHHHHHHHHHHH---Hhhee
Q 003853 695 LINILRGL--NETEIQFRLANVQKVW---QRFLY 723 (791)
Q Consensus 695 l~~~L~~i--~~~~~~~m~~~~~~~~---~~~~~ 723 (791)
+.+.+..+ .++...+|+++.++.. ++|-|
T Consensus 512 la~~i~~l~~~~~~~~~~~~~~~~~~~~~~~f~~ 545 (568)
T 2vsy_A 512 FVAKAVALASDPAALTALHARVDVLRRASGVFHM 545 (568)
T ss_dssp HHHHHHHHHHCHHHHHHHHHHHHHHHHHSSTTCH
T ss_pred HHHHHHHHhcCHHHHHHHHHHHHHhhhcCCCCCH
Confidence 43333332 5677788888887665 55544
No 158
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=58.21 E-value=6.9 Score=34.24 Aligned_cols=66 Identities=30% Similarity=0.509 Sum_probs=42.1
Q ss_pred CCCCCCccccC-CcchhhcccccccCccccCCCCCCC--cccccccccCcC---CCCCCCceec-CC----eeecCCC--
Q 003853 234 TNGSKPGWCNV-DPEEAYALKVQFKEECDCKYDGLLG--QFCEVPVSSTCV---NQCSGHGHCR-GG----FCQCDSG-- 300 (791)
Q Consensus 234 ~~C~~~G~C~~-~~~~~~~~~~c~~g~C~C~~~G~~G--~~Ce~~~~~~C~---~~Cs~~G~C~-~G----~C~C~~G-- 300 (791)
..|..++.|.. .++ ..+|.|. .||.| ..|-.. +..|. ..|.-+.+|. .+ .|.|.+|
T Consensus 16 t~Cp~NA~C~r~~~G---------~e~CrCl-~gY~~dg~~Cv~~-Np~C~~nNGGCd~nAeC~~~~~~ki~C~C~~~~~ 84 (105)
T 1n1i_A 16 TNVPENAACYRYLDG---------TEEWRCL-LGFKEVGGKCVPA-SITCEENNGGCAPEAECTMDDKKEVECKCTKEGS 84 (105)
T ss_dssp SCCCTTEEEEECTTS---------CEEEEEC-TTEEECSSSEEEC-CCCTTSGGGGSCTTSEEEECTTSCEEEECCSTTC
T ss_pred CCCCCCCCeEECCCC---------CEeEEEE-CCeeccCCEEEEC-CcchhhcCCCcCCCcEeEECCCCEEEeECCCCCC
Confidence 35666777754 221 4589998 89985 466544 44454 2477777886 22 7999888
Q ss_pred ---cccCCCCCcc
Q 003853 301 ---WYGVDCSIPS 310 (791)
Q Consensus 301 ---~~G~~C~~~~ 310 (791)
|.|..|+..+
T Consensus 85 ~~~~~GvfC~~ss 97 (105)
T 1n1i_A 85 EPLFEGVFCSSSS 97 (105)
T ss_dssp CEEGGGTEECCCC
T ss_pred ccccceEEECCCC
Confidence 4566666543
No 159
>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A
Probab=57.34 E-value=11 Score=32.74 Aligned_cols=41 Identities=27% Similarity=0.729 Sum_probs=27.7
Q ss_pred CCC-CCCCCCCCEEec-CCC--eeeeCCCCcCCC--CCccccCCCCC
Q 003853 121 KSC-KSDCSGQGVCNH-ELG--QCRCFHGFRGKG--CSERIHFQCNF 161 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~-~~G--~C~C~~G~~G~~--Ce~~~~~~C~~ 161 (791)
..| ...|.-+..|-. ..| +|+|.+||.|+. |......+|..
T Consensus 5 h~C~~~~C~~NA~C~r~~~g~e~C~C~~gy~gdg~~Cv~~~~~sC~~ 51 (99)
T 1ob1_C 5 HQCVKKQCPQNSGCFRHLDEREECKCLLNYKQEGDKCVENPNPTCNE 51 (99)
T ss_dssp TCCCSCCCCTTEEEECCTTSCCEEEECTTEEEETTEEEECSCCCSTT
T ss_pred eEeccCCCCCCCCeEEcCCCCEEEEecCCeecCCCeEeeCCCCChhh
Confidence 455 567888999965 345 799999998764 55432245653
No 160
>3qcw_A Neurexin-1-alpha; synaptic adhesion molecule, cell adhesion; HET: NAG; 2.65A {Bos taurus} PDB: 3r05_A* 3poy_A*
Probab=57.25 E-value=4.8 Score=50.82 Aligned_cols=33 Identities=30% Similarity=0.977 Sum_probs=27.8
Q ss_pred CCC-CCCCCCCCEEecCCC--eeeeC-CCCcCCCCCc
Q 003853 121 KSC-KSDCSGQGVCNHELG--QCRCF-HGFRGKGCSE 153 (791)
Q Consensus 121 ~~C-~~~Cs~~G~C~~~~G--~C~C~-~G~~G~~Ce~ 153 (791)
..| +++|.++|+|....+ .|.|+ +||+|+.|+.
T Consensus 620 ~~C~~~pC~ngg~C~~~~~~~~C~C~~~g~~G~~C~~ 656 (1245)
T 3qcw_A 620 KPCLSNPCKNNGMCRDGWNRYVCDCSGTGYLGRSCER 656 (1245)
T ss_dssp CGGGSCCCCTTCEEEECSSSEEEECTTTTEESTTSCE
T ss_pred CCCCccCCCCCCEEeCCCCCeEEECCCCCcccccCcc
Confidence 578 789999999985332 79999 7999999986
No 161
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=55.18 E-value=2.6 Score=44.68 Aligned_cols=77 Identities=12% Similarity=0.114 Sum_probs=47.1
Q ss_pred hhHHHhhccCeEEEeCCCCCCchhHHHHHhhCCeeEEEecccccCCcccCCCCcEEEEecCCChhhHHHHHhcC--CHHH
Q 003853 629 ENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYESFVVRISEDEIPNLINILRGL--NETE 706 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~~~sv~i~~~~~~~l~~~L~~i--~~~~ 706 (791)
.+..+.|+.+.+.+.|.| .-++|||.+|+ |||.++..- ...++++-. ..+.++. +...|.+.|..+ .++.
T Consensus 274 ~~~~~~~~~ad~~v~~sg----~~~lEA~a~G~-Pvi~~~~~~-~~~e~v~~g-~g~~v~~-d~~~la~~i~~ll~~~~~ 345 (375)
T 3beo_A 274 IDFHNVAARSYLMLTDSG----GVQEEAPSLGV-PVLVLRDTT-ERPEGIEAG-TLKLAGT-DEETIFSLADELLSDKEA 345 (375)
T ss_dssp HHHHHHHHTCSEEEECCH----HHHHHHHHHTC-CEEECSSCC-SCHHHHHTT-SEEECCS-CHHHHHHHHHHHHHCHHH
T ss_pred HHHHHHHHhCcEEEECCC----ChHHHHHhcCC-CEEEecCCC-CCceeecCC-ceEEcCC-CHHHHHHHHHHHHhChHh
Confidence 367899999999888762 22899999995 999885421 123445433 4555554 655555544433 3444
Q ss_pred HHHHHHH
Q 003853 707 IQFRLAN 713 (791)
Q Consensus 707 ~~~m~~~ 713 (791)
..+|.++
T Consensus 346 ~~~~~~~ 352 (375)
T 3beo_A 346 HDKMSKA 352 (375)
T ss_dssp HHHHCCC
T ss_pred Hhhhhhc
Confidence 4555433
No 162
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=53.34 E-value=77 Score=33.55 Aligned_cols=82 Identities=10% Similarity=0.107 Sum_probs=53.5
Q ss_pred hhHHHhhccCeEEEeCCCCCCchhHHHHHhhCCeeEEEecccccCCc---------ccCCCCcEEEEecCCCh--hhHHH
Q 003853 629 ENYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQDGIFLPYE---------NVLNYESFVVRISEDEI--PNLIN 697 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G~~~s~R~~dal~~GCIPVii~d~~~lPf~---------~~idw~~~sv~i~~~~~--~~l~~ 697 (791)
.+..+.|+.+...+.-.| ..-+.|++.+|. |+|+-+ +|+. ..+--...++.|+++++ ..|.+
T Consensus 244 ~dm~~~l~~aDlvI~raG---~~Tv~E~~a~G~-P~Ilip---~p~~~~~~Q~~NA~~l~~~G~a~~l~~~~~~~~~L~~ 316 (365)
T 3s2u_A 244 SDMAAAYAWADLVICRAG---ALTVSELTAAGL-PAFLVP---LPHAIDDHQTRNAEFLVRSGAGRLLPQKSTGAAELAA 316 (365)
T ss_dssp SCHHHHHHHCSEEEECCC---HHHHHHHHHHTC-CEEECC--------CCHHHHHHHHHHTTTSEEECCTTTCCHHHHHH
T ss_pred hhhhhhhccceEEEecCC---cchHHHHHHhCC-CeEEec---cCCCCCcHHHHHHHHHHHCCCEEEeecCCCCHHHHHH
Confidence 356789999998876655 234789999996 887632 2221 11334557888888775 34555
Q ss_pred HHhcC--CHHHHHHHHHHHHHH
Q 003853 698 ILRGL--NETEIQFRLANVQKV 717 (791)
Q Consensus 698 ~L~~i--~~~~~~~m~~~~~~~ 717 (791)
.|+.+ +++++++|.++.+++
T Consensus 317 ~i~~ll~d~~~~~~m~~~a~~~ 338 (365)
T 3s2u_A 317 QLSEVLMHPETLRSMADQARSL 338 (365)
T ss_dssp HHHHHHHCTHHHHHHHHHHHHT
T ss_pred HHHHHHCCHHHHHHHHHHHHhc
Confidence 55443 577888898888754
No 163
>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*
Probab=52.39 E-value=5.6 Score=45.36 Aligned_cols=44 Identities=20% Similarity=0.640 Sum_probs=29.7
Q ss_pred cCccccCCCCCC--CcccccccccCcCC----CCCCCceec------------CCeeecCCCcccCCC
Q 003853 257 KEECDCKYDGLL--GQFCEVPVSSTCVN----QCSGHGHCR------------GGFCQCDSGWYGVDC 306 (791)
Q Consensus 257 ~g~C~C~~~G~~--G~~Ce~~~~~~C~~----~Cs~~G~C~------------~G~C~C~~G~~G~~C 306 (791)
.|+|.|. +||. |..|+ .|+. .+.+.+.|. ...|.|..||.-..-
T Consensus 262 ~G~C~C~-~G~e~~~~~C~-----aC~~g~~k~~~~~~~C~~CP~~S~s~~~Gs~~C~C~ng~~ra~~ 323 (536)
T 3fl7_A 262 IGQCLCQ-AGYEKVEDACQ-----ACSPGFFKFEASESPCLECPEHTLPSPEGATSCECEEGFFRAPQ 323 (536)
T ss_dssp BCCCEEC-TTEEEETTEEE-----ECCTTEECCSCCSSCCEECCSSEECCCTTCSSCEECTTCBCCTT
T ss_pred cCcEecc-CccccCCceee-----ecCCCCCcccCCCCccccCCCCCCCCCCCccEEEEeccccccCC
Confidence 6899999 9997 45555 3442 344555554 348999999885443
No 164
>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1
Probab=52.29 E-value=8.7 Score=28.66 Aligned_cols=23 Identities=26% Similarity=0.842 Sum_probs=18.0
Q ss_pred CCCCCCCEEecCCC--eeeeCCCCcCC
Q 003853 125 SDCSGQGVCNHELG--QCRCFHGFRGK 149 (791)
Q Consensus 125 ~~Cs~~G~C~~~~G--~C~C~~G~~G~ 149 (791)
..|+ ++|.+..| .|.|++||.+.
T Consensus 20 ~~C~--~~C~n~~Gsy~C~C~~Gy~~~ 44 (53)
T 1apq_A 20 PQCQ--HLCHNYVGGYFCSCRPGYELQ 44 (53)
T ss_dssp CTTS--SEEEEETTEEEEECSTTCEEC
T ss_pred CCCC--CEeECCCCCeEEECCCCCeEC
Confidence 3575 49987777 79999999864
No 165
>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...
Probab=51.82 E-value=7 Score=29.85 Aligned_cols=27 Identities=37% Similarity=1.008 Sum_probs=19.9
Q ss_pred CCCCCCEEecCCC--eeeeCCCCc----CCCCCcc
Q 003853 126 DCSGQGVCNHELG--QCRCFHGFR----GKGCSER 154 (791)
Q Consensus 126 ~Cs~~G~C~~~~G--~C~C~~G~~----G~~Ce~~ 154 (791)
.|+ ..|.+..| .|.|++||. |..|...
T Consensus 10 ~C~--~~C~nt~Gsy~C~C~~Gy~L~~d~~~C~di 42 (55)
T 2jkh_L 10 DCD--QFCHEEQNSVVCSCARGYTLADNGKACIPT 42 (55)
T ss_dssp GCS--SEEEEETTEEEEECCTTEEECTTSSCEEES
T ss_pred CcC--cEeEcCCCCeEEeCCCCCEECCCCCeeccC
Confidence 465 38987677 699999996 5667653
No 166
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=49.38 E-value=18 Score=42.36 Aligned_cols=95 Identities=7% Similarity=0.120 Sum_probs=61.0
Q ss_pred hhHHHhhccCeEEEeCCC-CCCchhHHHHHhhCCeeEEEecccccCCcccCCCC------cEEEEecC---CC----hhh
Q 003853 629 ENYHEDLSSSVFCGVLPG-DGWSGRMEDSILQGCIPVVIQDGIFLPYENVLNYE------SFVVRISE---DE----IPN 694 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G-~~~s~R~~dal~~GCIPVii~d~~~lPf~~~idw~------~~sv~i~~---~~----~~~ 694 (791)
.+|.+.|+.+...+.|.= .+++.-..|||++|+ |||.++.-=++ +-+.|.. ...+.|+. .+ +..
T Consensus 510 ~d~~~~~~~advfV~PS~~EgfGl~~LEAmA~G~-PvI~s~~gG~~-d~V~dg~~~~~~~~tG~lV~~rd~~d~ee~aea 587 (725)
T 3nb0_A 510 LDYDEFVRGCHLGVFPSYYEPWGYTPAECTVMGV-PSITTNVSGFG-SYMEDLIETNQAKDYGIYIVDRRFKAPDESVEQ 587 (725)
T ss_dssp CCHHHHHHHCSEEECCCSSBSSCHHHHHHHHTTC-CEEEETTBHHH-HHHHTTSCHHHHHHTTEEEECCSSSCHHHHHHH
T ss_pred hHHHHHHhhceEEEeccccCCCCHHHHHHHHcCC-CEEEeCCCChh-hhhhccccccCCCCceEEEeCCCCCCHHHHHHH
Confidence 479999999999888863 467888999999995 66666532111 0011111 12233321 12 234
Q ss_pred HHHHHhc---CCHHHHHHHHHHHHHHHHhheecc
Q 003853 695 LINILRG---LNETEIQFRLANVQKVWQRFLYRD 725 (791)
Q Consensus 695 l~~~L~~---i~~~~~~~m~~~~~~~~~~~~~~~ 725 (791)
|.+.|.. .++++..+|+++.+++.+.|.|..
T Consensus 588 La~aL~~f~~~d~~~r~~mr~~ar~~A~~FSWe~ 621 (725)
T 3nb0_A 588 LVDYMEEFVKKTRRQRINQRNATEALSDLLDWKR 621 (725)
T ss_dssp HHHHHHHHHTCCHHHHHHHHHHHHHGGGGGBHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 5555443 467888999999999989999974
No 167
>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=48.66 E-value=7.3 Score=31.61 Aligned_cols=28 Identities=21% Similarity=0.523 Sum_probs=19.8
Q ss_pred CCC---CCCCCCCCEEecCCC--eee-eCCCCcC
Q 003853 121 KSC---KSDCSGQGVCNHELG--QCR-CFHGFRG 148 (791)
Q Consensus 121 ~~C---~~~Cs~~G~C~~~~G--~C~-C~~G~~G 148 (791)
++| +..|.++++|.+..| .|. |..||.+
T Consensus 4 dEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~ 37 (71)
T 2kl7_A 4 NECLTIPEACKGEMKCINHYGGYLCLPRSAAVIN 37 (71)
T ss_dssp CCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCS
T ss_pred ccccCCCCCCCCCCEeECCCCCeEecccCCcccc
Confidence 567 256988899987777 676 3467764
No 168
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=46.35 E-value=79 Score=28.95 Aligned_cols=84 Identities=19% Similarity=0.149 Sum_probs=45.1
Q ss_pred HHhh--ccCeEEEeCCCCCCchhHHHHHhhCCeeEEEeccc-ccCC-cccCCCCcEEEEecCCC--hhhHHHHHhcCCHH
Q 003853 632 HEDL--SSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQDGI-FLPY-ENVLNYESFVVRISEDE--IPNLINILRGLNET 705 (791)
Q Consensus 632 ~~~l--~~S~FCl~p~G~~~s~R~~dal~~GCIPVii~d~~-~lPf-~~~idw~~~sv~i~~~~--~~~l~~~L~~i~~~ 705 (791)
.+.| ..+...+...|. .-+.|||.+| +|+|+.... +.++ .+.+......+.++.++ ..+|.+.|+.+-.+
T Consensus 79 ~~~l~~~~ad~~I~~~G~---~t~~Ea~~~G-~P~i~~p~~~~Q~~na~~l~~~g~g~~~~~~~~~~~~l~~~i~~ll~~ 154 (170)
T 2o6l_A 79 NDLLGHPKTRAFITHGGA---NGIYEAIYHG-IPMVGIPLFADQPDNIAHMKARGAAVRVDFNTMSSTDLLNALKRVIND 154 (170)
T ss_dssp HHHHTSTTEEEEEECCCH---HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHTTTSEEECCTTTCCHHHHHHHHHHHHHC
T ss_pred HHHhcCCCcCEEEEcCCc---cHHHHHHHcC-CCEEeccchhhHHHHHHHHHHcCCeEEeccccCCHHHHHHHHHHHHcC
Confidence 4566 666665554432 3489999999 788886532 1111 11234456677777653 34555555443111
Q ss_pred HHHHHHHHHHHHHHhh
Q 003853 706 EIQFRLANVQKVWQRF 721 (791)
Q Consensus 706 ~~~~m~~~~~~~~~~~ 721 (791)
.+|+++.+++.+.+
T Consensus 155 --~~~~~~a~~~~~~~ 168 (170)
T 2o6l_A 155 --PSYKENVMKLSRIQ 168 (170)
T ss_dssp --HHHHHHHHHHC---
T ss_pred --HHHHHHHHHHHHHh
Confidence 13666666655443
No 169
>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4
Probab=43.45 E-value=19 Score=31.55 Aligned_cols=34 Identities=24% Similarity=0.667 Sum_probs=25.1
Q ss_pred CCCC-CCCCCCCCEEec-CCC--eeeeCCCCcCC--CCCc
Q 003853 120 GKSC-KSDCSGQGVCNH-ELG--QCRCFHGFRGK--GCSE 153 (791)
Q Consensus 120 ~~~C-~~~Cs~~G~C~~-~~G--~C~C~~G~~G~--~Ce~ 153 (791)
...| ...|.-+..|.. ..| +|+|-+||.|+ .|-.
T Consensus 10 ~h~C~~t~Cp~NA~C~r~~~G~e~CrCl~gY~~dg~~Cv~ 49 (105)
T 1n1i_A 10 AHKCIDTNVPENAACYRYLDGTEEWRCLLGFKEVGGKCVP 49 (105)
T ss_dssp TTSCCSSCCCTTEEEEECTTSCEEEEECTTEEECSSSEEE
T ss_pred CcEecCCCCCCCCCeEECCCCCEeEEEECCeeccCCEEEE
Confidence 3566 456888999965 556 79999999875 3544
No 170
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=42.60 E-value=18 Score=42.19 Aligned_cols=25 Identities=12% Similarity=0.092 Sum_probs=18.9
Q ss_pred CCCCCCCEEecCCCeeeeCCCCcCCCC
Q 003853 125 SDCSGQGVCNHELGQCRCFHGFRGKGC 151 (791)
Q Consensus 125 ~~Cs~~G~C~~~~G~C~C~~G~~G~~C 151 (791)
.-|.++++|. ...|.|..+|.++.+
T Consensus 52 ~~c~~~~~~~--~c~~~C~~~~~~~~~ 76 (680)
T 1zlg_A 52 VWCQNHKQCS--KCLEPCKESGDLRKH 76 (680)
T ss_pred ecCCCccccc--cccCcccccccCchh
Confidence 4488899987 356688888877765
No 171
>1cmr_A Charybdotoxin, alpha chimera; antagonist of nicotinic acetylcholine receptor, curaremimetic protein; NMR {Synthetic} SCOP: g.3.7.2
Probab=39.52 E-value=16 Score=24.74 Aligned_cols=22 Identities=36% Similarity=0.856 Sum_probs=16.6
Q ss_pred CCCCCCCC-----CCCCEEecCCCeeeeC
Q 003853 120 GKSCKSDC-----SGQGVCNHELGQCRCF 143 (791)
Q Consensus 120 ~~~C~~~C-----s~~G~C~~~~G~C~C~ 143 (791)
+++|-..| ..+|.|. +|.|.|-
T Consensus 4 s~~C~~~Ck~~~g~~~gKC~--NgkC~Cy 30 (31)
T 1cmr_A 4 SKECWSVCQRLHNTSKGWCD--HRGCICE 30 (31)
T ss_dssp GGGSSSSSTTTSSCCCCCEE--TTEECCC
T ss_pred chHHHHHHHHHhCCCCCcee--CCCceeC
Confidence 45676667 4578999 8999985
No 172
>2ktc_A Potassium channel toxin alpha-KTX 9.4; BTK-2, scorpion toxin, KV1.1, disulfide bond, ionic channel inhibitor, neurotoxin; NMR {Mesobuthus tamulus}
Probab=39.16 E-value=8.7 Score=25.94 Aligned_cols=24 Identities=29% Similarity=0.814 Sum_probs=18.5
Q ss_pred CCCCCCCCC---CCEEecCCCeeeeCCCC
Q 003853 121 KSCKSDCSG---QGVCNHELGQCRCFHGF 146 (791)
Q Consensus 121 ~~C~~~Cs~---~G~C~~~~G~C~C~~G~ 146 (791)
.+||.-|.+ ..+|. +|.|.|.+|-
T Consensus 6 EeCP~HCk~k~A~~tCd--n~~C~Cn~~~ 32 (34)
T 2ktc_A 6 AECPMHCKGKMAKPTCE--NEVCKCNIGK 32 (34)
T ss_dssp HHHHHTCCTTCCCEEEE--TTEEEECTTC
T ss_pred ccChhhhcccccccccc--CCeEecccCC
Confidence 356777876 45898 8999999984
No 173
>1pvz_A K+ toxin-like peptide; alpha/beta scaffold; NMR {Mesobuthus martensii} SCOP: g.3.7.2
Probab=38.56 E-value=4.7 Score=27.38 Aligned_cols=18 Identities=50% Similarity=1.521 Sum_probs=14.9
Q ss_pred cCCCCCCCceecCCeeec
Q 003853 280 CVNQCSGHGHCRGGFCQC 297 (791)
Q Consensus 280 C~~~Cs~~G~C~~G~C~C 297 (791)
|..+|..+|.|.+|.|+|
T Consensus 13 C~~~C~~~gKC~NgkC~C 30 (31)
T 1pvz_A 13 CSRKCPGNPPCRNGFCAC 30 (31)
T ss_dssp HHHHSSSCCCEETTEESC
T ss_pred HHhhhccCCcccCCCcee
Confidence 445678889999999998
No 174
>1jlz_A Tityustoxin alpha-KTX; scorpion venom, K+-channel blocker, structure; NMR {Synthetic} SCOP: g.3.7.2
Probab=36.76 E-value=7.9 Score=25.11 Aligned_cols=22 Identities=41% Similarity=1.256 Sum_probs=16.8
Q ss_pred CCCCCCCCCCCEEecCCCeeeeCC
Q 003853 121 KSCKSDCSGQGVCNHELGQCRCFH 144 (791)
Q Consensus 121 ~~C~~~Cs~~G~C~~~~G~C~C~~ 144 (791)
++|-..|..+|.|. +|.|.|-+
T Consensus 3 ~~C~~~C~~~gKCm--NgkC~Cy~ 24 (26)
T 1jlz_A 3 GSCRKKCKGSGKCI--NGRCKCYX 24 (26)
T ss_dssp SSHHHHTTSSEEEE--TTEEEEC-
T ss_pred hhhhhhhCCCCEEe--CCCceeec
Confidence 45655677899999 89999964
No 175
>3t5o_A Complement component C6; macpf, MAC, membrane attack complex, innate IMMU system, blood, membrane, cytolysin, immune SYST; HET: NAG FUL FUC BGC MAN; 2.87A {Homo sapiens} PDB: 4a5w_B* 4e0s_B*
Probab=32.94 E-value=22 Score=43.30 Aligned_cols=33 Identities=24% Similarity=0.590 Sum_probs=26.4
Q ss_pred CCCCCCCCCCEEecCCC--eeeeCCCCcCCCCCccc
Q 003853 122 SCKSDCSGQGVCNHELG--QCRCFHGFRGKGCSERI 155 (791)
Q Consensus 122 ~C~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~ 155 (791)
.|. +|.|+|.+....+ .|.|++||.|+.|+...
T Consensus 501 ~C~-PC~ngg~~~l~g~~C~C~C~~g~~G~~Ce~~~ 535 (913)
T 3t5o_A 501 QCA-PCPNNGRPTLSGTECLCVCQSGTYGENCEKQS 535 (913)
T ss_dssp GSC-CBTTTBEEEEETTEEEEECCTTBCSTTSCCBC
T ss_pred cCC-CCCCCCEeecCCCceEEEccCCccccCccCcc
Confidence 454 6999999985344 57899999999999863
No 176
>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A
Probab=32.11 E-value=14 Score=38.26 Aligned_cols=26 Identities=42% Similarity=1.016 Sum_probs=20.3
Q ss_pred CCCCCCceec----CCeeecCCCccc--CCCC
Q 003853 282 NQCSGHGHCR----GGFCQCDSGWYG--VDCS 307 (791)
Q Consensus 282 ~~Cs~~G~C~----~G~C~C~~G~~G--~~C~ 307 (791)
.+|..++.|. +..|.|++||+| ..|.
T Consensus 13 ~~C~~~a~C~Nt~Gsy~C~C~~Gy~GnG~~C~ 44 (285)
T 1gl4_A 13 HQCSVHAECRDYATGFCCRCVANYTGNGRQCV 44 (285)
T ss_dssp GGSCTTEEEEECSSCEEEEECTTEEECSSSEE
T ss_pred CCCCCCCEeEcCCCCeEEEcCCCCCCCCCcCC
Confidence 5688888997 348999999995 4564
No 177
>1wz5_A Potassium channel blocking toxin 1; ionic channel inhibitor; HET: ABA; NMR {Pandinus imperator}
Probab=31.53 E-value=14 Score=25.79 Aligned_cols=25 Identities=24% Similarity=0.771 Sum_probs=18.0
Q ss_pred cCCCCCCCC-----CCCCEEecCCCeeeeCCC
Q 003853 119 GGKSCKSDC-----SGQGVCNHELGQCRCFHG 145 (791)
Q Consensus 119 ~~~~C~~~C-----s~~G~C~~~~G~C~C~~G 145 (791)
++.+|-..| ..+|.|. +|.|.|-++
T Consensus 6 ~s~~C~~~Ck~~~g~~~gKCm--NgkC~Cy~~ 35 (35)
T 1wz5_A 6 GTSDCGRPCQQQTGXPNSKCI--NRMCKCYGX 35 (35)
T ss_dssp TTTTTHHHHHHHSCSSCCEEE--TTEEECSCC
T ss_pred CchHHHHHHHHHHCCCCccee--CCcceecCC
Confidence 345675555 5689999 899999653
No 178
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=31.19 E-value=1.3e+02 Score=31.79 Aligned_cols=87 Identities=10% Similarity=-0.065 Sum_probs=49.2
Q ss_pred hHHHhhccCeEEEeCCCCCCchhHHHHHhhCCeeEEEeccc-ccCC-cccCCCCcEEEEecCC--ChhhHHHHHhcC--C
Q 003853 630 NYHEDLSSSVFCGVLPGDGWSGRMEDSILQGCIPVVIQDGI-FLPY-ENVLNYESFVVRISED--EIPNLINILRGL--N 703 (791)
Q Consensus 630 ~y~~~l~~S~FCl~p~G~~~s~R~~dal~~GCIPVii~d~~-~lPf-~~~idw~~~sv~i~~~--~~~~l~~~L~~i--~ 703 (791)
+..+.|+.+...+...|. .-+.|||.+| +|||+.+.. +.+. .+.|.-....+.++.. +...|.+.|+.+ .
T Consensus 301 ~~~~~l~~ad~~v~~~g~---~t~~Ea~a~G-~P~v~~p~~~~q~~~~~~v~~~g~g~~~~~~~~~~~~l~~ai~~ll~~ 376 (412)
T 3otg_A 301 PQAALLPHVDLVVHHGGS---GTTLGALGAG-VPQLSFPWAGDSFANAQAVAQAGAGDHLLPDNISPDSVSGAAKRLLAE 376 (412)
T ss_dssp CHHHHGGGCSEEEESCCH---HHHHHHHHHT-CCEEECCCSTTHHHHHHHHHHHTSEEECCGGGCCHHHHHHHHHHHHHC
T ss_pred CHHHHHhcCcEEEECCch---HHHHHHHHhC-CCEEecCCchhHHHHHHHHHHcCCEEecCcccCCHHHHHHHHHHHHhC
Confidence 578899999977765542 2489999999 698885321 0000 1122223456666655 444555554443 3
Q ss_pred HHHHHHHHHHHHHHHHh
Q 003853 704 ETEIQFRLANVQKVWQR 720 (791)
Q Consensus 704 ~~~~~~m~~~~~~~~~~ 720 (791)
++...+|++..+++...
T Consensus 377 ~~~~~~~~~~~~~~~~~ 393 (412)
T 3otg_A 377 ESYRAGARAVAAEIAAM 393 (412)
T ss_dssp HHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHhcC
Confidence 45555565555544443
No 179
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=30.98 E-value=11 Score=35.53 Aligned_cols=35 Identities=26% Similarity=0.826 Sum_probs=21.4
Q ss_pred CCCCCcccccccccCcCC------CCCCCceec----CCeeecCCCcc
Q 003853 265 DGLLGQFCEVPVSSTCVN------QCSGHGHCR----GGFCQCDSGWY 302 (791)
Q Consensus 265 ~G~~G~~Ce~~~~~~C~~------~Cs~~G~C~----~G~C~C~~G~~ 302 (791)
.||.+..+...+ +.|.. .|.+ .|. ...|.|.+||.
T Consensus 113 ~Gf~~~~~~~di-~eC~~~~~~~~~C~~--~C~n~~g~~~C~C~~Gy~ 157 (170)
T 1szb_A 113 TGFEAFYAAEDI-DECQVAPGEAPTCDH--HCHNHLGGFYCSCRAGYV 157 (170)
T ss_dssp CEEEEEEEEEEC-CTTCCCTTSCCSSSS--EEEEETTEEEEECCTTEE
T ss_pred cCceeeeecccc-CcccCCCCCCCccCC--ccccCCCCEEEeCCCCcE
Confidence 567666654432 23431 1654 576 34899999998
No 180
>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1
Probab=30.53 E-value=13 Score=27.86 Aligned_cols=24 Identities=33% Similarity=0.883 Sum_probs=16.6
Q ss_pred EEecCCC--eeeeCCCCc----CCCCCccc
Q 003853 132 VCNHELG--QCRCFHGFR----GKGCSERI 155 (791)
Q Consensus 132 ~C~~~~G--~C~C~~G~~----G~~Ce~~~ 155 (791)
.|.+..| .|.|++||. |..|+..+
T Consensus 11 ~C~n~~gs~~C~C~~Gy~L~~d~~tC~did 40 (51)
T 1kig_L 11 FCREERSEVRCSCAHGYVLGDDSKSCVSTE 40 (51)
T ss_dssp CCCEETTEECCCCCTTEEECTTSSCEEECS
T ss_pred EeEcCCCCeEEeCCCCcEECCCCCccccCC
Confidence 3554455 699999996 66777543
No 181
>1zlg_A Anosmin 1; insulin-like growth factor receptor Cys-rich fold, WHEY acidic protein fold, fibronectin type III fold, hormone- growth factor complex; NMR {Homo sapiens}
Probab=29.57 E-value=32 Score=40.09 Aligned_cols=33 Identities=30% Similarity=0.815 Sum_probs=25.6
Q ss_pred CcCCCCCCCceecCCeeecCCCcccCCCCCcccc
Q 003853 279 TCVNQCSGHGHCRGGFCQCDSGWYGVDCSIPSVM 312 (791)
Q Consensus 279 ~C~~~Cs~~G~C~~G~C~C~~G~~G~~C~~~~~~ 312 (791)
.|...|...+.|..+.+-|..++ |..|..+...
T Consensus 123 ~c~~~c~~d~~c~g~~~Cc~n~c-G~~C~~P~~~ 155 (680)
T 1zlg_A 123 ACVESCEVDNECSGVKKCCSNGC-GHTCQVPKTL 155 (680)
T ss_pred hhhhhccccccCCCccccccccc-ccccccccee
Confidence 46778888888987766698887 8899987543
No 182
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=27.27 E-value=49 Score=35.67 Aligned_cols=63 Identities=13% Similarity=0.086 Sum_probs=43.8
Q ss_pred hhHHHhhccCeEEEeCCC-CCCchhHHHHH-------hhCCeeEEEecccccCCcccCCCCcEEEE-ecCCChhhHHHHH
Q 003853 629 ENYHEDLSSSVFCGVLPG-DGWSGRMEDSI-------LQGCIPVVIQDGIFLPYENVLNYESFVVR-ISEDEIPNLINIL 699 (791)
Q Consensus 629 ~~y~~~l~~S~FCl~p~G-~~~s~R~~dal-------~~GCIPVii~d~~~lPf~~~idw~~~sv~-i~~~~~~~l~~~L 699 (791)
.+..+.|+.+...+.|.- ++++.-++||| .+| +|||.++. +.+ ....+. ++..+...|.+.|
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla~G-~PVIas~~-------v~~-~~~G~l~v~~~d~~~la~ai 346 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDFFG-LPAVCPNA-------VVG-PYKSRFGYTPGNADSVIAAI 346 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHHHT-CCEEEEGG-------GTC-SCSSEEEECTTCHHHHHHHH
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhhCC-CcEEEehh-------ccc-CcceEEEeCCCCHHHHHHHH
Confidence 467889999998887754 35666789999 999 69999887 223 233344 6777776555544
Q ss_pred h
Q 003853 700 R 700 (791)
Q Consensus 700 ~ 700 (791)
.
T Consensus 347 ~ 347 (406)
T 2hy7_A 347 T 347 (406)
T ss_dssp H
T ss_pred H
Confidence 3
No 183
>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=27.20 E-value=27 Score=32.80 Aligned_cols=24 Identities=38% Similarity=1.034 Sum_probs=18.1
Q ss_pred CCCCCEEecCCC--eeeeCCCCc----CCCCC
Q 003853 127 CSGQGVCNHELG--QCRCFHGFR----GKGCS 152 (791)
Q Consensus 127 Cs~~G~C~~~~G--~C~C~~G~~----G~~Ce 152 (791)
|++ .|.+..| .|.|++||+ |..|+
T Consensus 137 C~~--~C~n~~g~~~C~C~~Gy~l~~d~~~C~ 166 (170)
T 1szb_A 137 CDH--HCHNHLGGFYCSCRAGYVLHRNKRTCS 166 (170)
T ss_dssp SSS--EEEEETTEEEEECCTTEEECTTSSCEE
T ss_pred cCC--ccccCCCCEEEeCCCCcEECCCCCccc
Confidence 764 7976666 799999998 55554
No 184
>3tbd_A Netrin-G2, laminet-2; laminin N-terminal domain, domain VI, LE-domain, N neuronal cell adhesion molecule, netrin G ligand 2, nervous system; HET: NAG; 1.80A {Homo sapiens} PDB: 3zyg_A* 3zyi_B*
Probab=27.09 E-value=31 Score=36.69 Aligned_cols=28 Identities=32% Similarity=0.864 Sum_probs=23.0
Q ss_pred CCCCC-CEEecCCC--eeeeCCCCcCCCCCc
Q 003853 126 DCSGQ-GVCNHELG--QCRCFHGFRGKGCSE 153 (791)
Q Consensus 126 ~Cs~~-G~C~~~~G--~C~C~~G~~G~~Ce~ 153 (791)
.|+|| ..|....| .|.|.....|++|+.
T Consensus 271 ~CnGHA~~C~~~~g~~~C~C~HnT~G~~Ce~ 301 (338)
T 3tbd_A 271 KCNLHANLCSMREGSLQCECEHNTTGPDCGK 301 (338)
T ss_dssp CCTTBCSCEEEETTEEEECCCTTEESTTSCE
T ss_pred cccCCcCccCCCCCCceecCCCCCCCCCCcc
Confidence 57777 47876666 599999999999986
No 185
>2lix_A IMKTX104, potassium channel toxins; disulfide bond stabilized structure; NMR {Lychas mucronatus}
Probab=30.56 E-value=16 Score=22.90 Aligned_cols=11 Identities=45% Similarity=1.256 Sum_probs=7.6
Q ss_pred CceecCCeeec
Q 003853 287 HGHCRGGFCQC 297 (791)
Q Consensus 287 ~G~C~~G~C~C 297 (791)
-|+|++|.|+|
T Consensus 16 igtcvdgkckc 26 (27)
T 2lix_A 16 IGTCVDGKCKC 26 (27)
Confidence 36777777776
No 186
>3ojy_A Complement component C8 alpha chain; macpf, lipocalin, immune system; HET: TPO BMA; 2.51A {Homo sapiens}
Probab=21.31 E-value=71 Score=36.39 Aligned_cols=38 Identities=26% Similarity=0.494 Sum_probs=22.9
Q ss_pred CCCCCCCCCCEEecCCC--eeeeCCCCcCCCCCccccCCCC
Q 003853 122 SCKSDCSGQGVCNHELG--QCRCFHGFRGKGCSERIHFQCN 160 (791)
Q Consensus 122 ~C~~~Cs~~G~C~~~~G--~C~C~~G~~G~~Ce~~~~~~C~ 160 (791)
.|. +|.++|.-....+ .|.|+.|+.|..|+.....+|.
T Consensus 468 ~c~-pC~~~g~~~~~gt~C~c~C~~G~~G~~C~~~~~~~~p 507 (554)
T 3ojy_A 468 RCG-PCFNNGVPILEGTSCRCQCRLGSLGAACEQTQTEGAK 507 (554)
T ss_dssp GSC-CCTTTCCEEEETTEEEECCCSSCCSSSCC------CC
T ss_pred ccc-ccCCCCEEcCCCCcccccCCCCCCCCCcccCcccCCC
Confidence 453 7888887743333 4678999999999986544454
No 187
>1bah_A Charybdotoxin, chabii; neurotoxin, potassium channel inhibitor; HET: PCA ABA; NMR {Leiurus quinquestriatus} SCOP: g.3.7.2 PDB: 2a9h_E* 2crd_A* 1lir_A*
Probab=20.82 E-value=22 Score=25.06 Aligned_cols=23 Identities=30% Similarity=0.666 Sum_probs=17.2
Q ss_pred cCCCCCCCC-----CCCCEEecCCCeeeeC
Q 003853 119 GGKSCKSDC-----SGQGVCNHELGQCRCF 143 (791)
Q Consensus 119 ~~~~C~~~C-----s~~G~C~~~~G~C~C~ 143 (791)
++.+|-..| ..+|.|. +|.|.|-
T Consensus 9 ~s~~C~~~Ck~~~g~~~gKCm--NgkC~Cy 36 (37)
T 1bah_A 9 TSKEXWSVCQRLHNTSRGKCM--NKKXRCY 36 (37)
T ss_dssp STTTTTTHHHHHTSCSCCCBC--SSSBCCC
T ss_pred CchHHHHHHHHHhCCCCccee--CCCCCcC
Confidence 346776666 5688998 7999984
No 188
>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1
Probab=20.23 E-value=55 Score=30.08 Aligned_cols=25 Identities=36% Similarity=0.828 Sum_probs=17.9
Q ss_pred CCCCCCEEecCCC--eeeeCCCCc----CCCCC
Q 003853 126 DCSGQGVCNHELG--QCRCFHGFR----GKGCS 152 (791)
Q Consensus 126 ~Cs~~G~C~~~~G--~C~C~~G~~----G~~Ce 152 (791)
.|+ +.|....| .|.|++||. |..|+
T Consensus 127 ~C~--~~C~n~~g~~~C~C~~Gy~l~~~~~~C~ 157 (159)
T 1nzi_A 127 PCS--HFCNNFIGGYFCSCPPEYFLHDDMKNCG 157 (159)
T ss_dssp CSS--SEEEEETTEEEEECCTTCEECTTSSCEE
T ss_pred CCC--CcccCcCCCEEEecCCCcEECCCCCccc
Confidence 464 47876555 799999998 55554
Done!