Query 003855
Match_columns 791
No_of_seqs 760 out of 5478
Neff 9.8
Searched_HMMs 46136
Date Thu Mar 28 13:14:25 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003855.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003855hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1E-92 2.2E-97 864.2 55.8 759 2-788 177-960 (968)
2 KOG1187 Serine/threonine prote 100.0 3.7E-52 7.9E-57 439.8 24.6 288 487-781 61-354 (361)
3 PLN00113 leucine-rich repeat r 100.0 2E-49 4.3E-54 483.9 28.0 412 1-423 152-588 (968)
4 KOG0192 Tyrosine kinase specif 100.0 1.1E-47 2.4E-52 401.9 24.5 260 502-785 42-309 (362)
5 KOG0197 Tyrosine kinases [Sign 100.0 1.8E-48 3.9E-53 404.2 15.1 256 501-781 206-463 (468)
6 KOG0581 Mitogen-activated prot 100.0 4.4E-47 9.5E-52 375.6 17.2 254 500-774 78-334 (364)
7 KOG0595 Serine/threonine-prote 100.0 9.7E-46 2.1E-50 368.7 18.4 200 500-707 9-217 (429)
8 KOG1026 Nerve growth factor re 100.0 7E-46 1.5E-50 403.4 16.3 263 501-786 486-769 (774)
9 KOG0575 Polo-like serine/threo 100.0 5.4E-45 1.2E-49 381.5 20.4 247 501-774 18-268 (592)
10 KOG0591 NIMA (never in mitosis 100.0 7E-46 1.5E-50 350.3 11.3 257 500-776 18-282 (375)
11 KOG0615 Serine/threonine prote 100.0 5.6E-45 1.2E-49 362.3 15.5 253 499-774 170-436 (475)
12 KOG0593 Predicted protein kina 100.0 2.1E-44 4.6E-49 343.8 16.9 264 500-774 1-283 (396)
13 KOG0196 Tyrosine kinase, EPH ( 100.0 8.2E-46 1.8E-50 393.6 7.4 258 503-783 631-895 (996)
14 KOG4194 Membrane glycoprotein 100.0 7.3E-46 1.6E-50 381.7 2.4 372 16-399 81-455 (873)
15 KOG0193 Serine/threonine prote 100.0 9.5E-44 2.1E-48 369.8 14.6 262 499-782 390-656 (678)
16 KOG4194 Membrane glycoprotein 100.0 9E-45 2E-49 373.7 6.7 401 15-426 54-459 (873)
17 KOG0598 Ribosomal protein S6 k 100.0 3.8E-43 8.2E-48 347.7 16.5 244 499-768 23-270 (357)
18 KOG1095 Protein tyrosine kinas 100.0 2.7E-43 5.8E-48 397.5 16.4 260 501-783 692-965 (1025)
19 KOG3653 Transforming growth fa 100.0 1.7E-42 3.6E-47 350.4 20.4 279 501-785 210-509 (534)
20 KOG0600 Cdc2-related protein k 100.0 5.5E-43 1.2E-47 356.9 16.5 268 500-774 116-399 (560)
21 KOG0659 Cdk activating kinase 100.0 1.8E-42 4E-47 325.3 18.7 264 501-775 2-281 (318)
22 KOG0661 MAPK related serine/th 100.0 4.6E-43 1E-47 354.8 15.0 266 498-775 7-291 (538)
23 KOG0582 Ste20-like serine/thre 100.0 1.5E-41 3.3E-46 341.1 20.6 261 500-774 25-292 (516)
24 KOG0198 MEKK and related serin 100.0 7.7E-42 1.7E-46 346.1 18.7 256 501-777 17-278 (313)
25 KOG0194 Protein tyrosine kinas 100.0 2.5E-42 5.4E-47 365.0 15.1 261 500-784 156-425 (474)
26 KOG0592 3-phosphoinositide-dep 100.0 9.1E-42 2E-46 350.8 16.8 254 497-775 69-338 (604)
27 KOG2052 Activin A type IB rece 100.0 9.8E-41 2.1E-45 335.1 22.6 280 488-781 198-505 (513)
28 KOG0578 p21-activated serine/t 100.0 1.5E-41 3.2E-46 352.9 17.0 249 501-774 273-522 (550)
29 cd05102 PTKc_VEGFR3 Catalytic 100.0 4E-41 8.7E-46 361.5 20.8 261 499-781 5-336 (338)
30 KOG4721 Serine/threonine prote 100.0 9.7E-42 2.1E-46 349.8 10.8 254 490-784 120-373 (904)
31 KOG0597 Serine-threonine prote 100.0 6.7E-41 1.5E-45 344.0 16.4 246 501-774 2-250 (808)
32 KOG0663 Protein kinase PITSLRE 100.0 7.3E-41 1.6E-45 323.9 15.0 266 499-774 74-360 (419)
33 KOG0201 Serine/threonine prote 100.0 1.1E-41 2.4E-46 342.3 8.5 248 501-774 13-262 (467)
34 KOG0605 NDR and related serine 100.0 2.4E-40 5.2E-45 341.0 18.3 251 499-773 139-443 (550)
35 KOG0616 cAMP-dependent protein 100.0 2.5E-40 5.4E-45 315.6 16.9 237 500-766 43-283 (355)
36 KOG0583 Serine/threonine prote 100.0 5.4E-40 1.2E-44 347.9 20.1 256 498-781 14-280 (370)
37 PHA02988 hypothetical protein; 100.0 6.6E-40 1.4E-44 341.9 20.4 247 507-781 26-281 (283)
38 KOG4278 Protein tyrosine kinas 100.0 1.6E-40 3.6E-45 343.4 14.3 256 501-781 267-525 (1157)
39 KOG1094 Discoidin domain recep 100.0 2.3E-40 4.9E-45 341.3 14.7 263 501-779 538-804 (807)
40 KOG4257 Focal adhesion tyrosin 100.0 2.4E-40 5.2E-45 343.0 14.6 258 501-783 389-653 (974)
41 cd05096 PTKc_DDR1 Catalytic do 100.0 2.2E-39 4.8E-44 342.6 22.1 261 501-777 5-303 (304)
42 cd05104 PTKc_Kit Catalytic dom 100.0 1.4E-39 3.1E-44 352.9 20.9 258 500-779 34-374 (375)
43 cd05106 PTKc_CSF-1R Catalytic 100.0 1.5E-39 3.3E-44 352.3 20.4 259 500-780 37-373 (374)
44 cd05064 PTKc_EphR_A10 Catalyti 100.0 4.2E-39 9.1E-44 333.5 20.0 256 500-779 4-265 (266)
45 KOG0694 Serine/threonine prote 100.0 1E-39 2.3E-44 345.6 15.3 244 498-769 365-613 (694)
46 KOG0660 Mitogen-activated prot 100.0 4.4E-39 9.5E-44 317.4 18.2 268 499-774 20-309 (359)
47 PF07714 Pkinase_Tyr: Protein 100.0 8.8E-40 1.9E-44 336.8 13.9 249 505-776 3-259 (259)
48 cd05105 PTKc_PDGFR_alpha Catal 100.0 9.4E-39 2E-43 347.0 21.7 259 500-780 36-398 (400)
49 cd05631 STKc_GRK4 Catalytic do 100.0 1.8E-38 3.8E-43 332.2 22.6 249 503-774 2-260 (285)
50 KOG1025 Epidermal growth facto 100.0 1.2E-39 2.5E-44 347.9 13.3 255 503-781 698-959 (1177)
51 cd05108 PTKc_EGFR Catalytic do 100.0 1E-38 2.2E-43 339.3 20.6 258 501-782 7-271 (316)
52 cd05048 PTKc_Ror Catalytic Dom 100.0 1.3E-38 2.8E-43 333.4 20.4 255 501-778 5-282 (283)
53 cd05612 STKc_PRKX_like Catalyt 100.0 1E-38 2.2E-43 334.9 19.2 245 501-775 1-254 (291)
54 KOG0580 Serine/threonine prote 100.0 2.9E-39 6.4E-44 299.4 12.9 248 499-774 20-272 (281)
55 cd05111 PTK_HER3 Pseudokinase 100.0 2E-38 4.3E-43 330.8 20.9 259 501-783 7-272 (279)
56 cd06649 PKc_MEK2 Catalytic dom 100.0 3.4E-38 7.4E-43 337.1 23.2 265 500-775 4-301 (331)
57 cd05033 PTKc_EphR Catalytic do 100.0 3E-38 6.5E-43 327.3 22.1 257 500-779 3-265 (266)
58 KOG0588 Serine/threonine prote 100.0 4.2E-39 9.1E-44 337.9 15.4 247 501-775 12-263 (786)
59 KOG2345 Serine/threonine prote 100.0 5.8E-39 1.3E-43 298.7 14.4 263 499-779 19-300 (302)
60 KOG0033 Ca2+/calmodulin-depend 100.0 1.4E-40 3E-45 308.1 3.6 251 500-774 10-266 (355)
61 KOG0199 ACK and related non-re 100.0 2.5E-39 5.4E-44 339.7 13.2 258 502-783 111-376 (1039)
62 cd05093 PTKc_TrkB Catalytic do 100.0 2.6E-38 5.7E-43 331.6 21.0 259 501-782 5-282 (288)
63 PTZ00263 protein kinase A cata 100.0 1.2E-38 2.6E-43 340.2 18.3 244 501-774 18-270 (329)
64 cd05054 PTKc_VEGFR Catalytic d 100.0 2.8E-38 6.1E-43 337.8 21.3 260 500-781 6-335 (337)
65 cd05114 PTKc_Tec_Rlk Catalytic 100.0 7.5E-38 1.6E-42 322.4 23.5 251 501-776 4-255 (256)
66 cd07869 STKc_PFTAIRE1 Catalyti 100.0 2.6E-38 5.7E-43 334.1 20.5 268 500-774 4-287 (303)
67 cd05600 STKc_Sid2p_Dbf2p Catal 100.0 2.6E-38 5.7E-43 338.6 20.3 252 501-775 1-257 (333)
68 cd05571 STKc_PKB Catalytic dom 100.0 2.2E-38 4.8E-43 337.3 19.5 241 507-774 1-250 (323)
69 KOG0589 Serine/threonine prote 100.0 4.2E-39 9.1E-44 333.7 13.4 251 500-775 3-258 (426)
70 KOG0585 Ca2+/calmodulin-depend 100.0 8.4E-39 1.8E-43 323.3 15.1 255 498-775 94-372 (576)
71 cd07871 STKc_PCTAIRE3 Catalyti 100.0 4.6E-38 1E-42 329.6 21.0 265 501-774 5-284 (288)
72 cd05084 PTKc_Fes Catalytic dom 100.0 5.3E-38 1.1E-42 322.7 20.6 248 507-777 1-251 (252)
73 cd05094 PTKc_TrkC Catalytic do 100.0 5.4E-38 1.2E-42 329.8 21.1 259 501-782 5-285 (291)
74 cd05049 PTKc_Trk Catalytic dom 100.0 4.1E-38 8.8E-43 329.0 19.8 254 501-777 5-279 (280)
75 KOG0610 Putative serine/threon 100.0 5.3E-38 1.1E-42 313.3 19.2 253 500-774 76-391 (459)
76 cd07848 STKc_CDKL5 Catalytic d 100.0 3.8E-38 8.3E-43 330.5 19.1 267 501-774 1-283 (287)
77 cd05072 PTKc_Lyn Catalytic dom 100.0 5.2E-38 1.1E-42 324.6 19.8 255 500-779 5-261 (261)
78 KOG0594 Protein kinase PCTAIRE 100.0 3.4E-38 7.3E-43 312.9 17.3 267 500-775 10-302 (323)
79 cd05148 PTKc_Srm_Brk Catalytic 100.0 3.1E-38 6.7E-43 326.3 17.8 256 499-779 4-261 (261)
80 cd05062 PTKc_IGF-1R Catalytic 100.0 4E-38 8.8E-43 328.4 18.8 256 499-777 4-276 (277)
81 cd06650 PKc_MEK1 Catalytic dom 100.0 1.2E-37 2.5E-42 332.9 22.3 199 500-706 4-204 (333)
82 cd05585 STKc_YPK1_like Catalyt 100.0 4.2E-38 9.2E-43 333.6 18.6 238 509-773 1-245 (312)
83 cd05068 PTKc_Frk_like Catalyti 100.0 8.6E-38 1.9E-42 322.9 20.4 255 500-779 5-261 (261)
84 PTZ00267 NIMA-related protein 100.0 7E-38 1.5E-42 349.9 21.2 250 502-774 68-322 (478)
85 cd05081 PTKc_Jak2_Jak3_rpt2 Ca 100.0 1E-37 2.2E-42 326.7 21.1 269 501-779 4-283 (284)
86 PTZ00426 cAMP-dependent protei 100.0 4E-38 8.8E-43 336.5 18.2 246 500-775 29-284 (340)
87 KOG0658 Glycogen synthase kina 100.0 9.2E-39 2E-43 315.7 12.1 262 500-774 23-305 (364)
88 cd05113 PTKc_Btk_Bmx Catalytic 100.0 6.8E-38 1.5E-42 322.5 19.1 252 501-777 4-256 (256)
89 cd05595 STKc_PKB_beta Catalyti 100.0 7.9E-38 1.7E-42 332.9 20.1 241 507-774 1-250 (323)
90 cd05090 PTKc_Ror1 Catalytic do 100.0 9.9E-38 2.2E-42 326.5 20.4 255 501-778 5-282 (283)
91 cd05109 PTKc_HER2 Catalytic do 100.0 1.3E-37 2.7E-42 325.0 20.9 260 500-783 6-272 (279)
92 cd05107 PTKc_PDGFR_beta Cataly 100.0 1.1E-37 2.4E-42 338.4 20.9 260 499-780 35-400 (401)
93 cd05052 PTKc_Abl Catalytic dom 100.0 1.6E-37 3.5E-42 321.2 20.9 254 501-779 6-262 (263)
94 cd08228 STKc_Nek6 Catalytic do 100.0 3.6E-37 7.7E-42 319.5 23.4 258 501-780 2-266 (267)
95 cd07859 STKc_TDY_MAPK_plant Ca 100.0 2.4E-37 5.1E-42 332.6 22.8 266 502-775 1-290 (338)
96 KOG1989 ARK protein kinase fam 100.0 7.3E-38 1.6E-42 343.0 18.8 260 500-783 36-315 (738)
97 cd05059 PTKc_Tec_like Catalyti 100.0 1.2E-37 2.6E-42 320.7 19.4 251 501-776 4-255 (256)
98 cd05080 PTKc_Tyk2_rpt2 Catalyt 100.0 1.7E-37 3.7E-42 324.7 20.8 268 502-780 4-282 (283)
99 PLN00034 mitogen-activated pro 100.0 1.9E-37 4.2E-42 334.5 21.6 248 501-775 74-328 (353)
100 cd05593 STKc_PKB_gamma Catalyt 100.0 1.3E-37 2.8E-42 331.9 19.9 242 507-775 1-251 (328)
101 KOG0574 STE20-like serine/thre 100.0 8.3E-40 1.8E-44 311.2 2.2 249 502-775 34-283 (502)
102 cd05045 PTKc_RET Catalytic dom 100.0 1.8E-37 3.9E-42 325.7 20.1 257 502-781 1-288 (290)
103 KOG0611 Predicted serine/threo 100.0 4.6E-38 1E-42 310.6 14.4 246 500-774 52-302 (668)
104 cd05043 PTK_Ryk Pseudokinase d 100.0 2E-37 4.3E-42 323.8 19.9 261 499-782 4-279 (280)
105 cd05092 PTKc_TrkA Catalytic do 100.0 1.8E-37 3.8E-42 323.9 19.5 254 501-777 5-279 (280)
106 cd05091 PTKc_Ror2 Catalytic do 100.0 1.6E-37 3.4E-42 325.1 19.0 255 501-778 5-282 (283)
107 cd05065 PTKc_EphR_B Catalytic 100.0 2.8E-37 6E-42 320.6 20.7 256 501-779 4-268 (269)
108 cd05101 PTKc_FGFR2 Catalytic d 100.0 3.3E-37 7.2E-42 326.0 21.6 262 499-783 13-300 (304)
109 cd05573 STKc_ROCK_NDR_like Cat 100.0 6.4E-38 1.4E-42 338.6 16.4 253 501-775 1-285 (350)
110 cd05053 PTKc_FGFR Catalytic do 100.0 1.4E-37 2.9E-42 327.3 18.5 259 499-780 10-292 (293)
111 cd05626 STKc_LATS2 Catalytic d 100.0 1.6E-37 3.6E-42 338.3 19.7 253 502-775 2-305 (381)
112 PTZ00283 serine/threonine prot 100.0 2.8E-37 6.1E-42 344.8 21.8 256 497-775 28-297 (496)
113 cd05601 STKc_CRIK Catalytic do 100.0 6.2E-38 1.3E-42 335.4 15.7 252 501-774 1-262 (330)
114 cd05099 PTKc_FGFR4 Catalytic d 100.0 3.5E-37 7.5E-42 327.2 21.2 266 500-788 11-302 (314)
115 cd05584 STKc_p70S6K Catalytic 100.0 2.5E-37 5.4E-42 329.3 20.1 241 507-774 2-255 (323)
116 cd05036 PTKc_ALK_LTK Catalytic 100.0 1.7E-37 3.6E-42 323.7 18.3 256 499-777 4-276 (277)
117 cd07862 STKc_CDK6 Catalytic do 100.0 4.4E-37 9.4E-42 322.9 21.6 265 501-774 1-286 (290)
118 cd05589 STKc_PKN Catalytic dom 100.0 2.4E-37 5.3E-42 329.7 19.9 244 503-774 1-256 (324)
119 cd08229 STKc_Nek7 Catalytic do 100.0 6.5E-37 1.4E-41 317.5 22.6 258 501-780 2-266 (267)
120 KOG0472 Leucine-rich repeat pr 100.0 1.1E-41 2.3E-46 336.7 -12.6 391 4-419 82-541 (565)
121 cd05055 PTKc_PDGFR Catalytic d 100.0 9.7E-37 2.1E-41 321.6 24.2 259 499-779 33-301 (302)
122 cd05098 PTKc_FGFR1 Catalytic d 100.0 2.9E-37 6.3E-42 326.8 20.3 261 500-783 17-303 (307)
123 PHA03212 serine/threonine kina 100.0 1E-36 2.2E-41 331.2 25.0 261 501-774 92-375 (391)
124 cd05075 PTKc_Axl Catalytic dom 100.0 4.3E-37 9.3E-42 319.8 21.2 253 504-779 2-271 (272)
125 KOG0599 Phosphorylase kinase g 100.0 4.6E-38 1E-42 295.7 12.4 252 499-774 15-282 (411)
126 cd05115 PTKc_Zap-70 Catalytic 100.0 3.9E-37 8.6E-42 316.9 20.4 248 508-779 2-255 (257)
127 cd05599 STKc_NDR_like Catalyti 100.0 1.3E-37 2.8E-42 337.8 17.4 252 501-774 1-295 (364)
128 cd05628 STKc_NDR1 Catalytic do 100.0 3.6E-37 7.8E-42 333.5 20.7 201 501-706 1-238 (363)
129 cd05116 PTKc_Syk Catalytic dom 100.0 5.2E-37 1.1E-41 316.2 20.7 247 508-779 2-255 (257)
130 cd05605 STKc_GRK4_like Catalyt 100.0 7.6E-37 1.6E-41 319.8 22.1 251 502-775 1-261 (285)
131 cd05063 PTKc_EphR_A2 Catalytic 100.0 5.3E-37 1.1E-41 318.4 20.8 257 500-779 4-267 (268)
132 cd05592 STKc_nPKC_theta_delta 100.0 3.3E-37 7.1E-42 327.1 19.6 240 507-773 1-246 (316)
133 cd05035 PTKc_Axl_like Catalyti 100.0 1.9E-36 4E-41 315.3 24.9 254 503-779 1-272 (273)
134 cd05103 PTKc_VEGFR2 Catalytic 100.0 5.3E-37 1.1E-41 329.5 21.4 260 500-781 6-341 (343)
135 cd05066 PTKc_EphR_A Catalytic 100.0 6E-37 1.3E-41 317.7 21.0 256 501-779 4-266 (267)
136 PRK13184 pknD serine/threonine 100.0 6.3E-37 1.4E-41 349.3 22.9 261 501-782 2-293 (932)
137 cd05097 PTKc_DDR_like Catalyti 100.0 7.3E-37 1.6E-41 321.9 21.8 261 501-777 5-294 (295)
138 cd05061 PTKc_InsR Catalytic do 100.0 3.7E-37 8E-42 322.9 19.4 259 499-780 4-279 (288)
139 cd05071 PTKc_Src Catalytic dom 100.0 6.4E-37 1.4E-41 316.4 20.7 253 501-779 6-260 (262)
140 cd05051 PTKc_DDR Catalytic dom 100.0 9.9E-37 2.1E-41 321.3 22.3 262 500-777 4-295 (296)
141 cd05594 STKc_PKB_alpha Catalyt 100.0 2E-37 4.3E-42 330.5 17.2 242 507-774 1-251 (325)
142 cd05590 STKc_nPKC_eta Catalyti 100.0 3.6E-37 7.8E-42 327.4 19.0 236 507-769 1-241 (320)
143 cd05588 STKc_aPKC Catalytic do 100.0 6.6E-37 1.4E-41 326.7 21.0 247 507-774 1-261 (329)
144 cd05618 STKc_aPKC_iota Catalyt 100.0 6.7E-37 1.5E-41 326.5 21.0 242 507-769 1-250 (329)
145 cd05608 STKc_GRK1 Catalytic do 100.0 1.4E-36 3.1E-41 316.9 23.0 244 509-774 1-256 (280)
146 cd05614 STKc_MSK2_N N-terminal 100.0 5.7E-37 1.2E-41 328.3 20.4 251 502-774 1-266 (332)
147 cd05596 STKc_ROCK Catalytic do 100.0 6.1E-37 1.3E-41 331.7 20.8 254 499-775 41-304 (370)
148 cd05079 PTKc_Jak1_rpt2 Catalyt 100.0 1.6E-36 3.4E-41 317.5 23.3 269 502-779 5-283 (284)
149 cd05587 STKc_cPKC Catalytic do 100.0 5.1E-37 1.1E-41 327.2 19.9 241 502-769 1-246 (324)
150 cd05089 PTKc_Tie1 Catalytic do 100.0 7.4E-37 1.6E-41 322.0 20.9 257 501-783 2-279 (297)
151 cd05607 STKc_GRK7 Catalytic do 100.0 1.3E-36 2.8E-41 316.7 22.4 246 509-776 1-251 (277)
152 cd05077 PTK_Jak1_rpt1 Pseudoki 100.0 9.6E-37 2.1E-41 314.8 21.1 239 507-776 1-261 (262)
153 cd05629 STKc_NDR_like_fungal C 100.0 3.1E-37 6.7E-42 336.0 18.3 253 501-775 1-305 (377)
154 cd05085 PTKc_Fer Catalytic dom 100.0 1E-36 2.2E-41 312.8 21.1 247 507-777 1-249 (250)
155 cd05591 STKc_nPKC_epsilon Cata 100.0 4.4E-37 9.6E-42 327.2 19.0 241 507-774 1-253 (321)
156 KOG0577 Serine/threonine prote 100.0 3.5E-38 7.6E-43 325.0 9.9 245 502-775 27-278 (948)
157 cd08529 STKc_FA2-like Catalyti 100.0 3.1E-36 6.7E-41 310.4 24.5 249 502-775 1-253 (256)
158 cd05070 PTKc_Fyn_Yrk Catalytic 100.0 6.7E-37 1.4E-41 316.0 19.5 253 500-778 5-259 (260)
159 cd05619 STKc_nPKC_theta Cataly 100.0 7.5E-37 1.6E-41 324.1 20.3 240 507-773 1-246 (316)
160 cd05032 PTKc_InsR_like Catalyt 100.0 5.4E-37 1.2E-41 320.0 18.9 255 500-777 5-276 (277)
161 cd08224 STKc_Nek6_Nek7 Catalyt 100.0 3E-36 6.5E-41 312.6 24.3 258 501-780 2-266 (267)
162 cd05057 PTKc_EGFR_like Catalyt 100.0 9.5E-37 2.1E-41 318.4 20.7 258 501-782 7-271 (279)
163 cd05050 PTKc_Musk Catalytic do 100.0 6.3E-37 1.4E-41 321.3 19.1 256 500-778 4-288 (288)
164 cd05625 STKc_LATS1 Catalytic d 100.0 4.7E-37 1E-41 335.2 18.7 251 502-774 2-304 (382)
165 cd05598 STKc_LATS Catalytic do 100.0 2.6E-37 5.6E-42 336.7 16.3 253 501-775 1-301 (376)
166 cd05616 STKc_cPKC_beta Catalyt 100.0 7.2E-37 1.6E-41 325.9 19.3 241 502-769 1-246 (323)
167 cd05067 PTKc_Lck_Blk Catalytic 100.0 9.6E-37 2.1E-41 314.9 19.6 253 500-778 5-259 (260)
168 cd06646 STKc_MAP4K5 Catalytic 100.0 8E-37 1.7E-41 316.8 19.0 254 500-775 8-265 (267)
169 cd05570 STKc_PKC Catalytic dom 100.0 8.1E-37 1.7E-41 324.6 19.4 241 507-774 1-251 (318)
170 cd06654 STKc_PAK1 Catalytic do 100.0 1.6E-36 3.4E-41 319.2 21.3 250 501-775 20-270 (296)
171 cd05056 PTKc_FAK Catalytic dom 100.0 1.8E-36 3.8E-41 314.8 21.2 257 501-782 6-268 (270)
172 cd05621 STKc_ROCK2 Catalytic d 100.0 9.6E-37 2.1E-41 329.7 19.9 254 499-775 41-304 (370)
173 cd05038 PTKc_Jak_rpt2 Catalyti 100.0 1.2E-36 2.6E-41 318.6 20.1 271 501-779 4-283 (284)
174 cd06612 STKc_MST1_2 Catalytic 100.0 1.5E-36 3.3E-41 312.7 20.4 249 501-774 3-252 (256)
175 cd06624 STKc_ASK Catalytic dom 100.0 3.7E-36 7.9E-41 312.0 23.4 255 497-774 4-264 (268)
176 cd06625 STKc_MEKK3_like Cataly 100.0 2.1E-36 4.4E-41 313.1 21.4 252 501-775 2-260 (263)
177 cd07872 STKc_PCTAIRE2 Catalyti 100.0 1.9E-36 4.2E-41 320.8 21.7 265 501-774 6-285 (309)
178 cd05039 PTKc_Csk_like Catalyti 100.0 4.9E-36 1.1E-40 308.8 24.0 250 500-779 5-256 (256)
179 cd05040 PTKc_Ack_like Catalyti 100.0 1.6E-36 3.4E-41 312.7 20.2 248 507-777 1-256 (257)
180 cd06643 STKc_SLK Catalytic dom 100.0 2E-36 4.3E-41 316.5 21.1 250 502-774 6-261 (282)
181 cd05088 PTKc_Tie2 Catalytic do 100.0 1.2E-36 2.5E-41 321.3 19.5 257 500-782 6-283 (303)
182 cd05087 PTKc_Aatyk1_Aatyk3 Cat 100.0 3E-36 6.4E-41 312.9 22.2 252 507-777 1-268 (269)
183 cd05110 PTKc_HER4 Catalytic do 100.0 1.3E-36 2.8E-41 321.0 19.9 259 500-782 6-271 (303)
184 cd00192 PTKc Catalytic domain 100.0 1.9E-36 4E-41 313.0 20.6 248 507-777 1-262 (262)
185 cd05041 PTKc_Fes_like Catalyti 100.0 2.3E-36 5E-41 310.3 21.2 248 507-777 1-250 (251)
186 cd05620 STKc_nPKC_delta Cataly 100.0 1.2E-36 2.6E-41 322.8 19.6 240 507-773 1-246 (316)
187 cd06615 PKc_MEK Catalytic doma 100.0 3.2E-36 7E-41 318.7 22.5 264 501-775 1-287 (308)
188 cd05582 STKc_RSK_N N-terminal 100.0 4E-37 8.7E-42 327.2 15.7 238 507-771 2-245 (318)
189 cd05575 STKc_SGK Catalytic dom 100.0 6.9E-37 1.5E-41 326.0 17.4 237 507-770 1-242 (323)
190 cd05058 PTKc_Met_Ron Catalytic 100.0 2.3E-36 5.1E-41 312.4 20.8 251 507-780 1-260 (262)
191 KOG4279 Serine/threonine prote 100.0 2.7E-37 5.9E-42 323.5 13.6 244 508-774 582-831 (1226)
192 cd07853 STKc_NLK Catalytic dom 100.0 2.8E-36 6.2E-41 327.8 22.2 265 502-775 1-288 (372)
193 cd05095 PTKc_DDR2 Catalytic do 100.0 2.8E-36 6.1E-41 317.6 21.5 261 501-777 5-295 (296)
194 cd06644 STKc_STK10_LOK Catalyt 100.0 3.3E-36 7.3E-41 316.4 21.9 251 501-774 12-268 (292)
195 cd05622 STKc_ROCK1 Catalytic d 100.0 6.7E-37 1.5E-41 331.3 16.9 259 494-775 36-304 (371)
196 cd05076 PTK_Tyk2_rpt1 Pseudoki 100.0 2.2E-36 4.7E-41 314.3 20.0 238 508-776 2-273 (274)
197 cd05069 PTKc_Yes Catalytic dom 100.0 2.4E-36 5.1E-41 311.9 20.1 252 501-778 6-259 (260)
198 cd05082 PTKc_Csk Catalytic dom 100.0 4.5E-36 9.7E-41 309.1 22.2 249 500-779 5-256 (256)
199 cd05060 PTKc_Syk_like Catalyti 100.0 3E-36 6.4E-41 310.6 20.6 248 507-779 1-255 (257)
200 cd05100 PTKc_FGFR3 Catalytic d 100.0 2.9E-36 6.3E-41 323.0 21.1 260 501-783 12-297 (334)
201 cd06611 STKc_SLK_like Catalyti 100.0 2E-36 4.4E-41 316.2 19.4 252 501-775 5-262 (280)
202 cd06645 STKc_MAP4K3 Catalytic 100.0 3.4E-36 7.3E-41 312.1 20.7 253 500-774 8-264 (267)
203 KOG0032 Ca2+/calmodulin-depend 100.0 2.4E-36 5.3E-41 319.4 19.8 251 499-774 33-292 (382)
204 cd05602 STKc_SGK1 Catalytic do 100.0 1.2E-36 2.6E-41 324.5 17.5 242 507-775 1-247 (325)
205 cd05617 STKc_aPKC_zeta Catalyt 100.0 3.8E-36 8.2E-41 320.6 21.1 242 507-769 1-248 (327)
206 PTZ00036 glycogen synthase kin 100.0 2.3E-36 5.1E-41 333.6 20.0 262 500-774 65-350 (440)
207 cd05034 PTKc_Src_like Catalyti 100.0 2.3E-36 5E-41 312.3 18.7 254 500-778 5-260 (261)
208 PHA03211 serine/threonine kina 100.0 4.3E-36 9.3E-41 329.6 21.8 265 500-775 168-455 (461)
209 KOG0579 Ste20-like serine/thre 100.0 1.5E-37 3.2E-42 322.2 9.5 251 501-774 32-288 (1187)
210 cd07876 STKc_JNK2 Catalytic do 100.0 8.5E-36 1.8E-40 322.6 23.6 264 499-775 19-315 (359)
211 cd06619 PKc_MKK5 Catalytic dom 100.0 4.2E-36 9.2E-41 313.3 20.5 249 501-775 1-253 (279)
212 cd05597 STKc_DMPK_like Catalyt 100.0 5.9E-36 1.3E-40 319.7 21.9 254 501-775 1-266 (331)
213 cd05112 PTKc_Itk Catalytic dom 100.0 9.3E-36 2E-40 306.8 22.6 251 501-776 4-255 (256)
214 cd06613 STKc_MAP4K3_like Catal 100.0 1E-35 2.2E-40 307.7 23.0 253 501-774 3-259 (262)
215 cd05615 STKc_cPKC_alpha Cataly 100.0 3.4E-36 7.4E-41 320.3 19.8 241 502-769 1-246 (323)
216 cd06655 STKc_PAK2 Catalytic do 100.0 3.5E-36 7.5E-41 316.4 19.6 249 501-774 19-268 (296)
217 cd05604 STKc_SGK3 Catalytic do 100.0 1.2E-36 2.6E-41 324.5 16.3 242 507-775 1-247 (325)
218 cd05047 PTKc_Tie Catalytic dom 100.0 5.9E-36 1.3E-40 310.7 20.8 248 507-780 1-269 (270)
219 cd05042 PTKc_Aatyk Catalytic d 100.0 1E-35 2.3E-40 308.8 22.6 250 508-776 2-267 (269)
220 cd05044 PTKc_c-ros Catalytic d 100.0 3.5E-36 7.6E-41 312.4 19.0 248 507-777 1-268 (269)
221 cd06631 STKc_YSK4 Catalytic do 100.0 1.2E-35 2.6E-40 307.6 22.9 251 502-774 1-261 (265)
222 cd08219 STKc_Nek3 Catalytic do 100.0 4E-36 8.6E-41 309.3 19.1 249 502-775 1-252 (255)
223 cd05627 STKc_NDR2 Catalytic do 100.0 1.6E-36 3.5E-41 328.2 16.8 252 501-774 1-292 (360)
224 cd06620 PKc_MAPKK_Byr1_like Ca 100.0 3.4E-36 7.4E-41 315.0 18.8 256 500-776 4-267 (284)
225 PF00069 Pkinase: Protein kina 100.0 3.4E-36 7.3E-41 310.9 18.5 252 503-774 1-256 (260)
226 PHA03207 serine/threonine kina 100.0 4.7E-36 1E-40 327.7 20.6 265 500-775 91-375 (392)
227 cd07873 STKc_PCTAIRE1 Catalyti 100.0 6.6E-36 1.4E-40 315.6 20.9 264 501-774 6-285 (301)
228 cd05630 STKc_GRK6 Catalytic do 100.0 8.8E-36 1.9E-40 311.6 21.6 249 503-774 2-260 (285)
229 cd05632 STKc_GRK5 Catalytic do 100.0 1.3E-35 2.8E-40 310.4 22.9 249 503-774 2-260 (285)
230 cd06656 STKc_PAK3 Catalytic do 100.0 5.8E-36 1.2E-40 315.0 20.1 250 500-774 18-268 (297)
231 cd05078 PTK_Jak2_Jak3_rpt1 Pse 100.0 2E-36 4.3E-41 312.0 16.2 240 507-777 1-258 (258)
232 cd05073 PTKc_Hck Catalytic dom 100.0 1.9E-35 4.2E-40 305.1 23.6 253 500-778 5-259 (260)
233 cd05624 STKc_MRCK_beta Catalyt 100.0 4.5E-36 9.8E-41 320.6 19.5 255 501-775 1-266 (331)
234 cd05623 STKc_MRCK_alpha Cataly 100.0 5.9E-36 1.3E-40 320.0 20.2 255 501-775 1-266 (332)
235 cd05603 STKc_SGK2 Catalytic do 100.0 2.6E-36 5.7E-41 321.4 17.4 237 507-770 1-242 (321)
236 cd06637 STKc_TNIK Catalytic do 100.0 3.3E-36 7.1E-41 313.2 17.4 252 498-774 3-268 (272)
237 KOG0444 Cytoskeletal regulator 100.0 1.1E-38 2.4E-43 330.5 -1.2 373 11-402 5-381 (1255)
238 cd05037 PTK_Jak_rpt1 Pseudokin 100.0 1.5E-35 3.2E-40 305.9 21.9 238 507-777 1-259 (259)
239 cd07878 STKc_p38beta_MAPK11 Ca 100.0 1.8E-35 4E-40 318.2 23.5 266 496-775 10-298 (343)
240 KOG0986 G protein-coupled rece 100.0 5.1E-37 1.1E-41 308.2 10.3 248 500-770 184-436 (591)
241 cd06609 STKc_MST3_like Catalyt 100.0 2E-35 4.4E-40 307.5 22.7 248 501-774 1-250 (274)
242 cd06640 STKc_MST4 Catalytic do 100.0 1.6E-35 3.5E-40 308.7 21.8 248 501-775 4-253 (277)
243 KOG0200 Fibroblast/platelet-de 100.0 5.5E-36 1.2E-40 340.2 19.7 258 501-780 296-580 (609)
244 cd06605 PKc_MAPKK Catalytic do 100.0 1.4E-35 3.1E-40 307.1 21.2 253 501-774 1-256 (265)
245 KOG1024 Receptor-like protein 100.0 1.9E-36 4.1E-41 298.4 13.7 266 495-783 278-559 (563)
246 cd07861 STKc_CDK1_euk Catalyti 100.0 1.4E-35 3.1E-40 310.7 21.0 265 502-774 1-281 (285)
247 cd08221 STKc_Nek9 Catalytic do 100.0 3.7E-35 8E-40 302.3 23.7 249 502-775 1-253 (256)
248 cd06642 STKc_STK25-YSK1 Cataly 100.0 8.3E-36 1.8E-40 310.9 18.7 247 501-774 4-252 (277)
249 PHA03209 serine/threonine kina 100.0 2.8E-35 6.1E-40 317.6 23.4 262 499-774 64-350 (357)
250 cd07874 STKc_JNK3 Catalytic do 100.0 1.7E-35 3.7E-40 319.9 21.6 265 499-775 15-311 (355)
251 cd07868 STKc_CDK8 Catalytic do 100.0 1.6E-35 3.4E-40 315.2 21.0 195 506-707 6-219 (317)
252 cd07839 STKc_CDK5 Catalytic do 100.0 1.1E-35 2.3E-40 311.4 19.3 266 502-774 1-280 (284)
253 cd06628 STKc_MAPKKK_Byr2_like 100.0 1.4E-35 3E-40 307.6 19.7 249 502-774 1-263 (267)
254 cd05086 PTKc_Aatyk2 Catalytic 100.0 4.5E-35 9.7E-40 303.7 23.5 251 508-777 2-267 (268)
255 cd06622 PKc_MAPKK_PBS2_like Ca 100.0 4E-35 8.6E-40 307.4 23.3 251 501-774 1-261 (286)
256 cd08227 PK_STRAD_alpha Pseudok 100.0 1.4E-35 3.1E-40 316.6 20.3 265 505-774 2-306 (327)
257 cd07875 STKc_JNK1 Catalytic do 100.0 2E-35 4.3E-40 320.4 21.7 265 499-775 22-318 (364)
258 PTZ00284 protein kinase; Provi 100.0 2E-35 4.4E-40 330.2 22.2 266 496-774 124-437 (467)
259 PTZ00266 NIMA-related protein 100.0 7.7E-36 1.7E-40 341.6 19.0 256 497-774 9-294 (1021)
260 cd06629 STKc_MAPKKK_Bck1_like 100.0 2.6E-35 5.6E-40 306.4 21.4 254 502-774 2-268 (272)
261 cd05046 PTK_CCK4 Pseudokinase 100.0 1.4E-35 3E-40 309.0 19.4 254 501-777 5-274 (275)
262 cd06651 STKc_MEKK3 Catalytic d 100.0 2.7E-35 6E-40 305.0 21.5 250 501-774 2-260 (266)
263 cd07863 STKc_CDK4 Catalytic do 100.0 2.2E-35 4.7E-40 309.8 20.7 262 502-774 1-284 (288)
264 cd07870 STKc_PFTAIRE2 Catalyti 100.0 2.4E-35 5.3E-40 309.8 21.1 269 499-774 3-287 (291)
265 smart00219 TyrKc Tyrosine kina 100.0 2.3E-35 5.1E-40 304.2 20.2 250 503-776 1-258 (258)
266 cd07847 STKc_CDKL1_4 Catalytic 100.0 2.6E-35 5.6E-40 308.9 20.8 266 501-774 1-282 (286)
267 cd05609 STKc_MAST Catalytic do 100.0 2.6E-35 5.7E-40 311.5 20.8 256 501-778 1-273 (305)
268 cd05074 PTKc_Tyro3 Catalytic d 100.0 2.4E-35 5.3E-40 306.8 20.2 254 503-779 1-272 (273)
269 cd08528 STKc_Nek10 Catalytic d 100.0 3.8E-35 8.1E-40 304.7 21.5 252 502-777 1-268 (269)
270 cd06638 STKc_myosinIIIA Cataly 100.0 2.3E-35 4.9E-40 309.3 20.0 258 494-775 11-283 (286)
271 cd06658 STKc_PAK5 Catalytic do 100.0 1.7E-35 3.7E-40 310.4 19.1 249 502-775 23-272 (292)
272 KOG0584 Serine/threonine prote 100.0 2.6E-36 5.5E-41 316.9 12.6 243 506-774 45-295 (632)
273 cd08223 STKc_Nek4 Catalytic do 100.0 9.5E-35 2.1E-39 299.5 24.2 248 502-774 1-253 (257)
274 KOG0983 Mitogen-activated prot 100.0 2.3E-36 5.1E-41 284.5 10.8 251 501-774 92-348 (391)
275 cd05083 PTKc_Chk Catalytic dom 100.0 2.2E-35 4.7E-40 303.6 19.1 246 501-778 6-253 (254)
276 cd06647 STKc_PAK_I Catalytic d 100.0 2.9E-35 6.3E-40 309.0 20.3 250 501-775 19-269 (293)
277 cd07832 STKc_CCRK Catalytic do 100.0 6.9E-35 1.5E-39 305.7 23.0 265 502-774 1-281 (286)
278 cd06632 STKc_MEKK1_plant Catal 100.0 6.8E-35 1.5E-39 300.7 22.5 247 502-774 1-254 (258)
279 cd08218 STKc_Nek1 Catalytic do 100.0 8.6E-35 1.9E-39 299.6 22.8 248 502-774 1-252 (256)
280 cd05586 STKc_Sck1_like Catalyt 100.0 2.1E-35 4.5E-40 315.8 18.9 240 509-774 1-252 (330)
281 cd06610 STKc_OSR1_SPAK Catalyt 100.0 6.3E-35 1.4E-39 302.7 22.0 256 501-774 1-263 (267)
282 cd07846 STKc_CDKL2_3 Catalytic 100.0 2.3E-35 4.9E-40 309.3 18.7 266 501-774 1-282 (286)
283 cd06617 PKc_MKK3_6 Catalytic d 100.0 6E-35 1.3E-39 305.6 21.8 249 501-774 1-260 (283)
284 KOG0667 Dual-specificity tyros 100.0 2.6E-35 5.6E-40 312.8 19.0 194 502-706 187-390 (586)
285 cd06636 STKc_MAP4K4_6 Catalyti 100.0 3.6E-35 7.7E-40 307.1 19.5 258 492-774 7-278 (282)
286 cd08220 STKc_Nek8 Catalytic do 100.0 1E-34 2.3E-39 299.0 22.7 247 502-774 1-252 (256)
287 cd06652 STKc_MEKK2 Catalytic d 100.0 7.5E-35 1.6E-39 301.6 21.5 250 501-774 2-260 (265)
288 cd06626 STKc_MEKK4 Catalytic d 100.0 6E-35 1.3E-39 302.3 20.8 252 502-774 1-260 (264)
289 cd06659 STKc_PAK6 Catalytic do 100.0 2.9E-35 6.4E-40 309.5 18.6 248 503-775 23-271 (297)
290 cd06621 PKc_MAPKK_Pek1_like Ca 100.0 1.4E-34 3E-39 303.3 23.5 255 501-774 1-265 (287)
291 cd07844 STKc_PCTAIRE_like Cata 100.0 5.2E-35 1.1E-39 307.3 20.1 267 501-774 5-287 (291)
292 cd06607 STKc_TAO Catalytic dom 100.0 1.1E-34 2.3E-39 307.2 22.5 246 501-775 15-267 (307)
293 cd07867 STKc_CDC2L6 Catalytic 100.0 1.1E-34 2.3E-39 309.0 22.3 194 506-706 6-218 (317)
294 cd05580 STKc_PKA Catalytic dom 100.0 8.4E-35 1.8E-39 305.4 21.1 243 501-773 1-252 (290)
295 cd06630 STKc_MEKK1 Catalytic d 100.0 1.2E-34 2.6E-39 300.8 21.7 253 502-774 1-263 (268)
296 KOG4717 Serine/threonine prote 100.0 3.2E-35 6.9E-40 298.7 16.8 248 500-774 17-269 (864)
297 cd07841 STKc_CDK7 Catalytic do 100.0 1E-34 2.2E-39 306.3 21.1 265 502-774 1-281 (298)
298 cd06639 STKc_myosinIIIB Cataly 100.0 5.2E-35 1.1E-39 307.3 18.6 257 494-774 15-286 (291)
299 cd06648 STKc_PAK_II Catalytic 100.0 1.2E-34 2.6E-39 303.2 21.0 248 502-774 20-268 (285)
300 cd06623 PKc_MAPKK_plant_like C 100.0 2.5E-34 5.3E-39 297.7 23.0 251 501-775 1-256 (264)
301 cd07860 STKc_CDK2_3 Catalytic 100.0 1.3E-34 2.8E-39 303.2 21.1 264 502-774 1-280 (284)
302 cd06614 STKc_PAK Catalytic dom 100.0 1.3E-34 2.9E-39 303.4 21.2 252 499-774 17-269 (286)
303 cd05122 PKc_STE Catalytic doma 100.0 1.6E-34 3.4E-39 296.8 21.3 249 502-774 1-250 (253)
304 cd06608 STKc_myosinIII_like Ca 100.0 5.5E-35 1.2E-39 304.5 18.0 252 499-774 4-271 (275)
305 cd07833 STKc_CDKL Catalytic do 100.0 1.1E-34 2.3E-39 304.6 20.3 265 501-774 1-284 (288)
306 cd06641 STKc_MST3 Catalytic do 100.0 1.4E-34 3E-39 301.6 21.0 248 501-775 4-253 (277)
307 KOG0596 Dual specificity; seri 100.0 2.3E-35 5E-40 303.5 14.3 253 500-774 360-626 (677)
308 KOG0444 Cytoskeletal regulator 100.0 1.2E-37 2.5E-42 322.9 -2.9 368 3-389 22-392 (1255)
309 cd05578 STKc_Yank1 Catalytic d 100.0 1.5E-34 3.3E-39 298.1 20.2 247 502-773 1-253 (258)
310 KOG0666 Cyclin C-dependent kin 100.0 9.1E-36 2E-40 285.4 10.0 202 500-706 23-242 (438)
311 cd06917 STKc_NAK1_like Catalyt 100.0 1.2E-34 2.6E-39 302.3 19.3 247 502-774 2-254 (277)
312 KOG0607 MAP kinase-interacting 100.0 3.7E-35 8.1E-40 282.1 13.8 270 492-774 74-360 (463)
313 cd05574 STKc_phototropin_like 100.0 1.7E-34 3.6E-39 307.2 20.3 252 501-774 1-288 (316)
314 KOG1035 eIF-2alpha kinase GCN2 100.0 3.1E-35 6.8E-40 328.1 15.2 255 498-774 476-870 (1351)
315 cd07831 STKc_MOK Catalytic dom 100.0 3.5E-34 7.5E-39 299.7 22.1 260 503-774 1-278 (282)
316 cd08217 STKc_Nek2 Catalytic do 100.0 5.3E-34 1.1E-38 295.3 23.2 253 502-775 1-262 (265)
317 cd07849 STKc_ERK1_2_like Catal 100.0 2.4E-34 5.1E-39 308.4 20.5 267 500-775 4-292 (336)
318 cd06616 PKc_MKK4 Catalytic dom 100.0 1.5E-34 3.4E-39 303.2 18.6 254 501-775 4-267 (288)
319 cd06635 STKc_TAO1 Catalytic do 100.0 5.4E-34 1.2E-38 303.0 22.8 246 502-776 26-278 (317)
320 cd07843 STKc_CDC2L1 Catalytic 100.0 2.6E-34 5.7E-39 302.3 20.2 263 500-774 4-289 (293)
321 cd08225 STKc_Nek5 Catalytic do 100.0 3.9E-34 8.5E-39 294.9 21.0 248 502-774 1-253 (257)
322 PHA03390 pk1 serine/threonine- 100.0 1.1E-33 2.4E-38 292.7 23.4 249 494-774 7-261 (267)
323 cd07865 STKc_CDK9 Catalytic do 100.0 3.8E-34 8.3E-39 303.8 20.3 268 500-774 11-306 (310)
324 cd07842 STKc_CDK8_like Catalyt 100.0 5.1E-34 1.1E-38 303.7 21.2 268 502-774 1-312 (316)
325 cd07835 STKc_CDK1_like Catalyt 100.0 5.3E-34 1.1E-38 298.4 20.7 263 503-774 1-279 (283)
326 cd07864 STKc_CDK12 Catalytic d 100.0 6.5E-34 1.4E-38 300.8 21.4 270 498-774 4-298 (302)
327 cd05633 STKc_GRK3 Catalytic do 100.0 1.3E-33 2.7E-38 294.4 22.9 242 508-775 1-255 (279)
328 KOG4645 MAPKKK (MAP kinase kin 100.0 6.3E-36 1.4E-40 335.1 5.9 255 497-774 1231-1493(1509)
329 cd06606 STKc_MAPKKK Catalytic 100.0 1.1E-33 2.3E-38 291.9 22.0 251 502-774 1-256 (260)
330 KOG4250 TANK binding protein k 100.0 1.3E-34 2.9E-39 307.7 15.4 274 502-782 14-313 (732)
331 cd07850 STKc_JNK Catalytic dom 100.0 1.3E-33 2.7E-38 304.9 23.4 264 499-775 14-311 (353)
332 cd07845 STKc_CDK10 Catalytic d 100.0 5.7E-34 1.2E-38 302.0 20.3 266 500-774 6-289 (309)
333 cd06618 PKc_MKK7 Catalytic dom 100.0 7.3E-34 1.6E-38 299.2 21.0 253 500-775 14-273 (296)
334 cd07855 STKc_ERK5 Catalytic do 100.0 6.6E-34 1.4E-38 304.7 20.8 267 500-774 4-293 (334)
335 cd05118 STKc_CMGC Catalytic do 100.0 1.3E-33 2.9E-38 295.5 22.7 263 503-774 1-279 (283)
336 PHA02882 putative serine/threo 100.0 5.5E-34 1.2E-38 299.4 19.8 259 500-776 11-293 (294)
337 cd05579 STKc_MAST_like Catalyt 100.0 3.7E-34 8.1E-39 296.4 18.3 245 509-776 1-255 (265)
338 KOG0690 Serine/threonine prote 100.0 4.9E-35 1.1E-39 281.7 10.6 242 499-767 166-411 (516)
339 KOG0472 Leucine-rich repeat pr 100.0 1.2E-37 2.6E-42 308.1 -7.7 374 4-402 105-546 (565)
340 cd05572 STKc_cGK_PKG Catalytic 100.0 8.4E-34 1.8E-38 293.3 20.6 242 509-774 1-251 (262)
341 cd06657 STKc_PAK4 Catalytic do 100.0 6.1E-34 1.3E-38 298.6 19.6 244 506-774 25-269 (292)
342 cd07836 STKc_Pho85 Catalytic d 100.0 1.4E-33 3.1E-38 295.3 21.9 264 502-774 1-280 (284)
343 cd07840 STKc_CDK9_like Catalyt 100.0 1.8E-33 3.9E-38 295.1 22.6 265 503-774 1-283 (287)
344 cd08216 PK_STRAD Pseudokinase 100.0 1.6E-33 3.4E-38 299.5 22.4 264 505-775 6-295 (314)
345 PHA03210 serine/threonine kina 100.0 6.7E-34 1.5E-38 318.8 20.5 270 499-774 146-453 (501)
346 cd07852 STKc_MAPK15 Catalytic 100.0 1.1E-33 2.4E-38 303.5 21.3 272 499-779 5-301 (337)
347 cd08215 STKc_Nek Catalytic dom 100.0 2.3E-33 5E-38 289.2 22.6 248 502-774 1-254 (258)
348 cd07837 STKc_CdkB_plant Cataly 100.0 1.2E-33 2.7E-38 297.5 21.0 265 501-774 1-290 (295)
349 cd08530 STKc_CNK2-like Catalyt 100.0 2.5E-33 5.4E-38 288.7 22.7 246 502-774 1-252 (256)
350 cd05577 STKc_GRK Catalytic dom 100.0 1.9E-33 4.1E-38 293.1 21.9 243 509-774 1-253 (277)
351 cd06627 STKc_Cdc7_like Catalyt 100.0 1.4E-33 3E-38 290.2 20.3 247 502-774 1-250 (254)
352 cd08226 PK_STRAD_beta Pseudoki 100.0 1.8E-33 3.8E-38 300.6 21.5 263 507-774 4-307 (328)
353 cd06634 STKc_TAO2 Catalytic do 100.0 2.8E-33 6E-38 296.3 22.4 247 501-776 15-268 (308)
354 cd05611 STKc_Rim15_like Cataly 100.0 2.8E-33 6.1E-38 289.0 21.6 243 507-776 2-249 (260)
355 cd07858 STKc_TEY_MAPK_plant Ca 100.0 1.9E-33 4.2E-38 301.4 20.8 271 500-780 4-298 (337)
356 PLN00009 cyclin-dependent kina 100.0 2.1E-33 4.6E-38 295.5 20.2 265 501-774 2-283 (294)
357 cd06633 STKc_TAO3 Catalytic do 100.0 3.9E-33 8.5E-38 295.7 22.3 244 503-775 23-273 (313)
358 cd06653 STKc_MEKK3_like_1 Cata 100.0 6.9E-33 1.5E-37 286.7 23.5 250 501-774 2-260 (264)
359 KOG0604 MAP kinase-activated p 100.0 2.7E-34 5.8E-39 274.2 11.4 250 499-774 59-321 (400)
360 cd05606 STKc_beta_ARK Catalyti 100.0 8.3E-33 1.8E-37 288.2 23.6 241 508-774 1-254 (278)
361 KOG0612 Rho-associated, coiled 100.0 2.3E-34 5.1E-39 318.5 11.9 258 494-774 68-337 (1317)
362 KOG0669 Cyclin T-dependent kin 100.0 3.2E-35 6.9E-40 273.6 4.3 269 501-774 17-314 (376)
363 cd07838 STKc_CDK4_6_like Catal 100.0 6.7E-33 1.4E-37 290.8 22.3 261 503-774 1-283 (287)
364 cd05583 STKc_MSK_N N-terminal 100.0 3E-33 6.4E-38 293.5 19.5 255 502-778 1-266 (288)
365 cd05581 STKc_PDK1 Catalytic do 100.0 4.6E-33 9.9E-38 290.9 20.8 249 501-774 1-276 (280)
366 cd07856 STKc_Sty1_Hog1 Catalyt 100.0 5.1E-33 1.1E-37 296.5 21.3 266 496-775 5-288 (328)
367 cd07866 STKc_BUR1 Catalytic do 100.0 3.2E-33 7E-38 296.8 19.6 267 500-774 7-307 (311)
368 cd07830 STKc_MAK_like Catalyti 100.0 8E-33 1.7E-37 289.5 22.1 262 503-774 1-279 (283)
369 cd07877 STKc_p38alpha_MAPK14 C 100.0 8.9E-33 1.9E-37 297.0 23.0 271 492-775 8-300 (345)
370 cd07834 STKc_MAPK Catalytic do 100.0 5.4E-33 1.2E-37 297.5 21.0 272 502-781 1-297 (330)
371 KOG1006 Mitogen-activated prot 100.0 3E-35 6.6E-40 276.1 3.0 253 503-775 66-327 (361)
372 cd07854 STKc_MAPK4_6 Catalytic 100.0 2.8E-33 6.2E-38 300.6 17.8 266 501-774 5-299 (342)
373 cd05613 STKc_MSK1_N N-terminal 100.0 8.2E-33 1.8E-37 290.4 20.8 251 502-774 1-267 (290)
374 KOG0586 Serine/threonine prote 100.0 1.7E-33 3.7E-38 295.6 15.1 249 498-774 53-305 (596)
375 cd07880 STKc_p38gamma_MAPK12 C 100.0 1.3E-32 2.8E-37 295.4 22.4 266 496-774 10-297 (343)
376 PTZ00024 cyclin-dependent prot 100.0 1E-32 2.2E-37 295.9 21.2 264 501-774 8-312 (335)
377 cd07829 STKc_CDK_like Catalyti 100.0 1.2E-32 2.5E-37 288.2 21.1 262 503-774 1-278 (282)
378 cd07851 STKc_p38 Catalytic dom 100.0 5.8E-33 1.2E-37 298.3 19.3 263 498-774 12-297 (343)
379 KOG0662 Cyclin-dependent kinas 100.0 4.5E-33 9.8E-38 246.1 14.0 266 501-774 2-282 (292)
380 cd07879 STKc_p38delta_MAPK13 C 100.0 1.8E-32 4E-37 294.3 21.8 269 499-781 13-305 (342)
381 KOG0671 LAMMER dual specificit 100.0 2.5E-33 5.5E-38 277.3 12.8 263 500-774 88-405 (415)
382 cd05610 STKc_MASTL Catalytic d 100.0 1.9E-32 4.1E-37 316.5 21.2 146 500-650 3-152 (669)
383 cd08222 STKc_Nek11 Catalytic d 100.0 1.6E-32 3.4E-37 283.4 18.2 247 502-774 1-256 (260)
384 cd07857 STKc_MPK1 Catalytic do 100.0 4.4E-32 9.6E-37 290.3 22.2 265 502-774 1-291 (332)
385 cd05123 STKc_AGC Catalytic dom 100.0 3.9E-32 8.4E-37 278.8 19.6 236 509-771 1-240 (250)
386 KOG0696 Serine/threonine prote 100.0 4E-33 8.6E-38 276.4 11.5 242 500-768 348-594 (683)
387 KOG1151 Tousled-like protein k 100.0 1.9E-33 4.1E-38 280.9 8.3 260 497-773 459-739 (775)
388 KOG0603 Ribosomal protein S6 k 100.0 1.5E-32 3.2E-37 290.1 13.0 239 500-774 321-562 (612)
389 KOG0668 Casein kinase II, alph 100.0 1.7E-32 3.7E-37 251.9 11.0 277 484-774 21-321 (338)
390 KOG4236 Serine/threonine prote 100.0 6.7E-33 1.4E-37 282.5 8.6 243 506-773 569-817 (888)
391 cd05576 STKc_RPK118_like Catal 100.0 9.1E-32 2E-36 273.2 16.8 221 512-771 4-225 (237)
392 KOG0587 Traf2- and Nck-interac 100.0 9.5E-32 2.1E-36 291.4 16.5 252 499-774 17-281 (953)
393 KOG0608 Warts/lats-like serine 100.0 4.8E-32 1E-36 281.9 12.5 207 501-712 629-879 (1034)
394 KOG0984 Mitogen-activated prot 100.0 5.3E-32 1.1E-36 245.2 11.1 214 500-720 45-268 (282)
395 KOG0614 cGMP-dependent protein 100.0 1.6E-32 3.5E-37 279.0 7.4 242 501-768 420-665 (732)
396 KOG0695 Serine/threonine prote 100.0 1.4E-31 3.1E-36 258.6 11.9 247 500-767 249-502 (593)
397 smart00220 S_TKc Serine/Threon 100.0 2.3E-30 5E-35 264.0 19.8 238 513-774 1-240 (244)
398 PLN03225 Serine/threonine-prot 100.0 5.2E-31 1.1E-35 296.6 16.1 258 499-774 130-449 (566)
399 PLN03224 probable serine/threo 100.0 2.3E-30 5.1E-35 283.2 20.0 257 499-774 143-499 (507)
400 KOG0618 Serine/threonine phosp 100.0 1.9E-33 4.2E-38 305.7 -4.7 387 3-419 58-489 (1081)
401 KOG1027 Serine/threonine prote 100.0 2.5E-31 5.3E-36 286.8 7.9 244 503-774 511-766 (903)
402 KOG0664 Nemo-like MAPK-related 100.0 1E-30 2.2E-35 246.2 5.1 265 503-776 55-344 (449)
403 KOG0618 Serine/threonine phosp 100.0 5.6E-32 1.2E-36 294.4 -8.4 384 12-418 44-464 (1081)
404 KOG1290 Serine/threonine prote 100.0 6.4E-28 1.4E-32 245.3 18.8 130 501-635 78-221 (590)
405 cd00180 PKc Catalytic domain o 100.0 2.3E-27 5E-32 236.2 21.2 210 509-775 1-214 (215)
406 KOG1152 Signal transduction se 100.0 9.6E-29 2.1E-33 255.6 10.0 196 501-705 561-770 (772)
407 KOG0665 Jun-N-terminal kinase 100.0 2.8E-28 6.1E-33 236.0 11.4 259 500-774 16-309 (369)
408 KOG4237 Extracellular matrix p 99.9 1.5E-29 3.2E-34 250.8 0.9 364 14-393 68-498 (498)
409 KOG0576 Mitogen-activated prot 99.9 3.6E-29 7.9E-34 263.0 3.4 252 501-774 15-270 (829)
410 smart00221 STYKc Protein kinas 99.9 1.2E-26 2.6E-31 233.7 19.2 199 503-706 1-202 (225)
411 KOG0670 U4/U6-associated splic 99.9 1.6E-27 3.5E-32 243.4 10.8 266 497-774 428-745 (752)
412 KOG1345 Serine/threonine kinas 99.9 2.7E-27 5.8E-32 223.4 11.2 256 499-778 22-287 (378)
413 KOG1167 Serine/threonine prote 99.9 6.3E-27 1.4E-31 235.6 13.3 268 497-774 32-380 (418)
414 smart00750 KIND kinase non-cat 99.9 2.3E-25 4.9E-30 215.1 16.6 170 582-782 1-172 (176)
415 KOG4237 Extracellular matrix p 99.9 3.2E-28 6.9E-33 241.4 -4.2 329 40-417 49-380 (498)
416 PLN03210 Resistant to P. syrin 99.9 1E-24 2.2E-29 266.6 23.4 339 30-394 551-904 (1153)
417 PLN00181 protein SPA1-RELATED; 99.9 6E-26 1.3E-30 269.4 11.1 195 554-774 29-264 (793)
418 PLN03210 Resistant to P. syrin 99.9 1.3E-24 2.9E-29 265.5 22.6 338 7-370 552-904 (1153)
419 PRK15387 E3 ubiquitin-protein 99.9 2E-24 4.3E-29 244.4 18.2 167 191-382 302-468 (788)
420 KOG0195 Integrin-linked kinase 99.9 8.3E-26 1.8E-30 213.1 5.0 250 503-780 192-447 (448)
421 PRK15387 E3 ubiquitin-protein 99.9 3.9E-24 8.4E-29 242.0 17.5 266 13-356 201-466 (788)
422 PRK09188 serine/threonine prot 99.9 3.1E-23 6.8E-28 217.6 14.9 169 496-679 13-195 (365)
423 KOG1164 Casein kinase (serine/ 99.9 1.8E-21 3.8E-26 206.1 20.5 261 502-782 19-300 (322)
424 KOG0590 Checkpoint kinase and 99.9 1E-22 2.3E-27 228.2 7.9 253 505-774 322-584 (601)
425 KOG1165 Casein kinase (serine/ 99.9 7.8E-21 1.7E-25 185.0 19.7 263 501-782 28-302 (449)
426 KOG1163 Casein kinase (serine/ 99.9 3.7E-21 8E-26 179.0 15.0 263 500-781 14-286 (341)
427 PRK15370 E3 ubiquitin-protein 99.9 1E-21 2.2E-26 224.2 13.8 163 191-372 262-428 (754)
428 PRK15370 E3 ubiquitin-protein 99.9 8.9E-22 1.9E-26 224.7 13.0 287 13-371 178-469 (754)
429 COG0515 SPS1 Serine/threonine 99.9 2.3E-20 5.1E-25 200.5 22.5 258 503-775 2-275 (384)
430 KOG1023 Natriuretic peptide re 99.9 1.4E-21 3E-26 208.2 12.1 219 551-783 1-228 (484)
431 PRK10359 lipopolysaccharide co 99.8 6.2E-21 1.3E-25 185.6 9.2 171 499-698 29-216 (232)
432 cd05147 RIO1_euk RIO kinase fa 99.8 3.8E-20 8.2E-25 178.9 11.9 140 506-652 2-167 (190)
433 KOG0617 Ras suppressor protein 99.8 1.4E-21 2.9E-26 172.4 -1.9 177 238-419 32-212 (264)
434 cd05145 RIO1_like RIO kinase f 99.8 4.6E-19 9.9E-24 172.4 14.9 141 506-654 2-169 (190)
435 PRK12274 serine/threonine prot 99.8 5.4E-19 1.2E-23 167.9 13.9 188 504-708 5-211 (218)
436 cd00116 LRR_RI Leucine-rich re 99.8 5E-21 1.1E-25 203.9 -1.3 210 186-395 76-319 (319)
437 KOG0617 Ras suppressor protein 99.8 2.4E-21 5.3E-26 170.8 -4.2 165 187-357 29-194 (264)
438 cd00116 LRR_RI Leucine-rich re 99.8 8.5E-21 1.8E-25 202.1 -1.2 285 17-347 2-319 (319)
439 PF14531 Kinase-like: Kinase-l 99.8 2.2E-19 4.8E-24 180.1 8.9 231 502-766 13-288 (288)
440 KOG1240 Protein kinase contain 99.8 8.6E-20 1.9E-24 203.0 6.4 249 502-777 24-293 (1431)
441 KOG4158 BRPK/PTEN-induced prot 99.8 4E-19 8.6E-24 177.0 9.5 195 555-776 274-511 (598)
442 KOG0603 Ribosomal protein S6 k 99.8 2.4E-20 5.1E-25 198.1 0.8 225 508-769 1-232 (612)
443 KOG1166 Mitotic checkpoint ser 99.8 3.3E-18 7.1E-23 195.1 15.1 201 494-702 691-901 (974)
444 PRK10345 hypothetical protein; 99.7 1.2E-17 2.7E-22 162.5 14.1 136 504-649 5-156 (210)
445 PRK14879 serine/threonine prot 99.7 5E-17 1.1E-21 161.8 15.8 134 507-651 2-143 (211)
446 smart00090 RIO RIO-like kinase 99.7 6.1E-17 1.3E-21 162.0 12.6 141 502-652 29-198 (237)
447 cd05144 RIO2_C RIO kinase fami 99.7 2E-16 4.4E-21 155.2 13.8 138 501-653 15-176 (198)
448 PRK09605 bifunctional UGMP fam 99.7 4.5E-16 9.7E-21 176.3 16.6 137 500-651 332-476 (535)
449 TIGR03724 arch_bud32 Kae1-asso 99.7 4.3E-16 9.4E-21 153.4 13.5 130 508-651 1-138 (199)
450 KOG0606 Microtubule-associated 99.7 3.5E-17 7.6E-22 182.5 6.2 213 501-772 83-309 (1205)
451 KOG1033 eIF-2alpha kinase PEK/ 99.7 1.9E-17 4.1E-22 172.8 2.8 173 571-772 330-509 (516)
452 KOG0590 Checkpoint kinase and 99.6 1.7E-16 3.6E-21 178.4 -0.1 256 500-773 19-284 (601)
453 cd05119 RIO RIO kinase family, 99.6 1.1E-14 2.3E-19 141.9 12.2 136 506-653 2-165 (187)
454 cd05120 APH_ChoK_like Aminogly 99.6 2.4E-14 5.2E-19 134.3 12.6 135 505-651 2-138 (155)
455 KOG0532 Leucine-rich repeat (L 99.6 2.5E-16 5.5E-21 164.2 -1.7 178 213-399 73-250 (722)
456 PRK01723 3-deoxy-D-manno-octul 99.5 8.9E-14 1.9E-18 139.6 13.8 135 507-652 37-192 (239)
457 PLN03150 hypothetical protein; 99.5 1E-13 2.2E-18 158.6 10.5 119 312-432 419-539 (623)
458 KOG0532 Leucine-rich repeat (L 99.5 2.9E-15 6.2E-20 156.5 -3.9 197 188-394 72-271 (722)
459 COG4886 Leucine-rich repeat (L 99.4 1.7E-13 3.7E-18 150.2 8.7 262 90-397 97-359 (394)
460 TIGR01982 UbiB 2-polyprenylphe 99.4 5E-13 1.1E-17 146.0 12.2 141 507-654 123-309 (437)
461 COG4886 Leucine-rich repeat (L 99.4 2E-13 4.3E-18 149.7 8.4 187 138-357 112-299 (394)
462 KOG1266 Protein kinase [Signal 99.3 1.6E-12 3.4E-17 127.5 7.7 197 550-774 120-330 (458)
463 KOG1243 Protein kinase [Genera 99.3 1.6E-11 3.4E-16 132.6 14.8 167 522-701 34-200 (690)
464 KOG1909 Ran GTPase-activating 99.3 5.8E-14 1.3E-18 139.0 -3.8 211 8-276 25-254 (382)
465 KOG1259 Nischarin, modulator o 99.3 3.8E-13 8.2E-18 129.8 0.6 209 184-401 207-417 (490)
466 KOG0601 Cyclin-dependent kinas 99.3 2.1E-12 4.6E-17 138.3 6.0 247 502-774 115-378 (524)
467 PF14580 LRR_9: Leucine-rich r 99.3 1.7E-12 3.7E-17 121.3 4.3 114 33-157 15-128 (175)
468 PRK04750 ubiB putative ubiquin 99.3 1.6E-11 3.4E-16 135.5 12.2 145 500-654 119-316 (537)
469 KOG1909 Ran GTPase-activating 99.3 3.2E-13 6.8E-18 133.8 -1.6 178 136-324 86-283 (382)
470 PF14580 LRR_9: Leucine-rich r 99.2 6.1E-12 1.3E-16 117.7 5.2 128 259-391 15-148 (175)
471 KOG0531 Protein phosphatase 1, 99.2 7.7E-13 1.7E-17 145.0 -1.1 88 289-379 234-325 (414)
472 KOG1259 Nischarin, modulator o 99.2 1.1E-12 2.4E-17 126.7 -0.0 129 240-374 285-414 (490)
473 PLN03150 hypothetical protein; 99.2 1.8E-11 3.9E-16 140.2 9.8 114 288-401 419-533 (623)
474 KOG0531 Protein phosphatase 1, 99.2 1.3E-12 2.8E-17 143.3 0.3 268 14-328 50-322 (414)
475 cd05151 ChoK Choline Kinase (C 99.2 3.3E-11 7.1E-16 115.3 9.5 131 506-650 3-135 (170)
476 KOG3207 Beta-tubulin folding c 99.2 4.6E-12 9.9E-17 129.0 2.8 210 62-301 121-340 (505)
477 KOG3207 Beta-tubulin folding c 99.2 2.2E-12 4.8E-17 131.3 -1.6 214 83-326 118-341 (505)
478 cd05146 RIO3_euk RIO kinase fa 99.2 5.7E-10 1.2E-14 106.7 14.0 136 507-653 3-175 (197)
479 KOG3087 Serine/threonine prote 99.1 8.3E-10 1.8E-14 100.4 12.9 142 505-651 11-165 (229)
480 COG3642 Mn2+-dependent serine/ 99.1 7.9E-10 1.7E-14 101.3 12.9 131 507-651 2-140 (204)
481 KOG0601 Cyclin-dependent kinas 99.1 6.9E-11 1.5E-15 126.8 4.6 249 499-780 263-519 (524)
482 cd05154 ACAD10_11_like Acyl-Co 99.1 8.9E-10 1.9E-14 110.5 11.7 143 507-651 4-206 (223)
483 KOG4658 Apoptotic ATPase [Sign 99.1 1.5E-10 3.4E-15 135.1 6.5 131 12-150 544-676 (889)
484 KOG0606 Microtubule-associated 99.0 3.4E-11 7.5E-16 135.4 -0.3 252 497-770 800-1084(1205)
485 PF13855 LRR_8: Leucine rich r 98.9 5.9E-10 1.3E-14 85.7 3.7 58 39-97 3-60 (61)
486 KOG4658 Apoptotic ATPase [Sign 98.9 7E-10 1.5E-14 129.7 6.0 288 37-365 523-825 (889)
487 PF13855 LRR_8: Leucine rich r 98.9 7.1E-10 1.5E-14 85.3 3.6 61 62-122 1-61 (61)
488 COG4248 Uncharacterized protei 98.9 7.1E-08 1.5E-12 98.6 15.9 263 505-785 15-306 (637)
489 PF01163 RIO1: RIO1 family; I 98.8 3.1E-08 6.8E-13 94.5 10.6 125 516-652 1-156 (188)
490 PRK15123 lipopolysaccharide co 98.8 1.1E-07 2.4E-12 96.5 14.3 138 509-651 30-194 (268)
491 KOG1859 Leucine-rich repeat pr 98.8 1.1E-10 2.4E-15 125.6 -8.0 129 264-399 165-295 (1096)
492 KOG3741 Poly(A) ribonuclease s 98.8 3.7E-07 8E-12 96.1 17.5 165 515-702 290-474 (655)
493 COG0478 RIO-like serine/threon 98.7 9.2E-08 2E-12 93.3 11.7 134 503-650 93-250 (304)
494 KOG1859 Leucine-rich repeat pr 98.7 1.9E-09 4.1E-14 116.4 -2.5 158 6-180 102-292 (1096)
495 KOG4579 Leucine-rich repeat (L 98.6 2.2E-09 4.7E-14 92.3 -3.4 133 265-401 29-164 (177)
496 KOG2137 Protein kinase [Signal 98.6 2.2E-08 4.7E-13 109.2 2.7 151 605-774 106-264 (700)
497 COG5238 RNA1 Ran GTPase-activa 98.5 9.6E-09 2.1E-13 98.6 -1.1 186 211-397 88-317 (388)
498 KOG2982 Uncharacterized conser 98.5 3E-08 6.6E-13 96.5 2.1 40 358-397 223-263 (418)
499 COG5238 RNA1 Ran GTPase-activa 98.5 2E-08 4.4E-13 96.4 0.7 196 135-372 85-316 (388)
500 KOG4579 Leucine-rich repeat (L 98.5 9.2E-09 2E-13 88.5 -2.3 59 288-348 78-136 (177)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1e-92 Score=864.24 Aligned_cols=759 Identities=29% Similarity=0.466 Sum_probs=557.8
Q ss_pred CccCCccccCCCCCCeeecCCCcccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCcc
Q 003855 2 AGQIPTEIGNLQNLQYLVFAENNLSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHS 81 (791)
Q Consensus 2 ~g~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~ 81 (791)
.|.+|..|+++++|++|+|++|++.+.+|..|.++++|++|+|++|.+++.+|..+.. +++|++|+|++|.+++..|..
T Consensus 177 ~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~L~~n~l~~~~p~~ 255 (968)
T PLN00113 177 VGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWIYLGYNNLSGEIPYEIGG-LTSLNHLDLVYNNLTGPIPSS 255 (968)
T ss_pred cccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEEECcCCccCCcCChhHhc-CCCCCEEECcCceeccccChh
Confidence 5678888888888888888888888888888888888888888888888778877766 788888888888888778888
Q ss_pred CcCCCCCCEEeccCccccccccccccccccccccccccccccccCCCc-c---------------ccccccccCCCCCCc
Q 003855 82 ITNATKLVALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSA-D---------------QWSFLSSLTNCRNLT 145 (791)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~-~---------------~~~~~~~l~~l~~L~ 145 (791)
|+++++|++|+|++|++.+..+..+.++++|+.|++++|.+....... . ....+..+..+++|+
T Consensus 256 l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~ 335 (968)
T PLN00113 256 LGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQNLEILHLFSNNFTGKIPVALTSLPRLQ 335 (968)
T ss_pred HhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCCCcEEECCCCccCCcCChhHhcCCCCC
Confidence 888888888888888887777777888888888888888776432111 0 001122344455555
Q ss_pred EEEccCCCCcccCChhhhhhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccc
Q 003855 146 ILSFGSNPLGGILPPVIGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNN 225 (791)
Q Consensus 146 ~L~L~~N~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N 225 (791)
.|++++|.+.+.+|..++.+ .+|+.|++++|++.+.+|..+..+++|+.|++++|.+.+..|..+..+++|+.|+|++|
T Consensus 336 ~L~L~~n~l~~~~p~~l~~~-~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n 414 (968)
T PLN00113 336 VLQLWSNKFSGEIPKNLGKH-NNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDN 414 (968)
T ss_pred EEECcCCCCcCcCChHHhCC-CCCcEEECCCCeeEeeCChhHhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCC
Confidence 55555555555555444443 34555555555555555555555555555566666655556666666666777777777
Q ss_pred cCcccCCccccccCCCceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCc
Q 003855 226 NLEGSIPYDLCHLKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPS 305 (791)
Q Consensus 226 ~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~ 305 (791)
++++..|..|..+++|+.|++++|.+++.+|..+..+++|+.|+|++|++.+..|..+ ..++|+.|++++|++++..|.
T Consensus 415 ~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~ 493 (968)
T PLN00113 415 SFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPR 493 (968)
T ss_pred EeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeecCccc-ccccceEEECcCCccCCccCh
Confidence 7766666667777777777777777776666666777777777777777776666544 457788889999999888999
Q ss_pred ccccCCCCCEEecCCcccCCCCCcchhccccccccccccccCCCCCCcccCCCCCCcEEEccCCccCCCCchhhhhcccC
Q 003855 306 NVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQL 385 (791)
Q Consensus 306 ~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L 385 (791)
.+..+++|+.|+|++|++.+.+|..+..+++|+.|+|++|.+++.+|..+..+++|+.|||++|++++.+|..+..+++|
T Consensus 494 ~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L 573 (968)
T PLN00113 494 KLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESL 573 (968)
T ss_pred hhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCChhHhCcccCCEEECCCCcccccCChhHhcCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEccCCCCcccCCCCCCCcCCccccccCCccccCCCC-CCCCCCCCCCCCCcccccceeeeeecchhhHH-H-HHHHH
Q 003855 386 KQFNVSHNRLEGEIPVKGSFKNFSVESFFGNYALCGPPK-LRVPPCKPDNSKSTKNVALTVLKYILPPIVCS-V-LLVIT 462 (791)
Q Consensus 386 ~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~~c~~~~-~~~~~c~~~~~~s~~~~~~~v~~~~~~~~~~~-~-~l~i~ 462 (791)
+.|++++|+++|.+|..+.+..+...++.||+.+|+++. ...++|..... ...++.+++++++++ + ++++.
T Consensus 574 ~~l~ls~N~l~~~~p~~~~~~~~~~~~~~~n~~lc~~~~~~~~~~c~~~~~------~~~~~~~~~~~~~~~~~~~~~~~ 647 (968)
T PLN00113 574 VQVNISHNHLHGSLPSTGAFLAINASAVAGNIDLCGGDTTSGLPPCKRVRK------TPSWWFYITCTLGAFLVLALVAF 647 (968)
T ss_pred CEEeccCCcceeeCCCcchhcccChhhhcCCccccCCccccCCCCCccccc------cceeeeehhHHHHHHHHHHHHHH
Confidence 999999999999999988888888889999999998652 23456743211 111122222111111 1 11111
Q ss_pred Hhhhhhcccc-ccccCCccCc-cccccCC--CCChhHHHHHhhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh
Q 003855 463 IIMYKRCRNR-STKHLDHEDF-LPLATWR--RTPYLDIQRATDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL 537 (791)
Q Consensus 463 ~~~~~~~r~~-~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~ 537 (791)
++++.+++++ ..+..+.+.. ....... .............|...+.||+|+||.||+|+. .++..||||++....
T Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~~vavK~~~~~~ 727 (968)
T PLN00113 648 GFVFIRGRNNLELKRVENEDGTWELQFFDSKVSKSITINDILSSLKEENVISRGKKGASYKGKSIKNGMQFVVKEINDVN 727 (968)
T ss_pred HHHHHHhhhcccccccccccccccccccccccchhhhHHHHHhhCCcccEEccCCCeeEEEEEECCCCcEEEEEEccCCc
Confidence 2222222211 1111111110 0000000 001122333446678888999999999999997 478999999886432
Q ss_pred hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHcc
Q 003855 538 ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHG 617 (791)
Q Consensus 538 ~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~ 617 (791)
. ....|++.+++++|||||+++|+|.+++..++||||+++|+|.++++. ++|.++.+++.|+|+|++|||+.
T Consensus 728 ~----~~~~~~~~l~~l~HpnIv~~~~~~~~~~~~~lv~Ey~~~g~L~~~l~~----l~~~~~~~i~~~ia~~L~yLH~~ 799 (968)
T PLN00113 728 S----IPSSEIADMGKLQHPNIVKLIGLCRSEKGAYLIHEYIEGKNLSEVLRN----LSWERRRKIAIGIAKALRFLHCR 799 (968)
T ss_pred c----ccHHHHHHHhhCCCCCcceEEEEEEcCCCCEEEEeCCCCCcHHHHHhc----CCHHHHHHHHHHHHHHHHHhccC
Confidence 2 123468889999999999999999999999999999999999999963 78999999999999999999965
Q ss_pred CCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHH
Q 003855 618 HSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMET 697 (791)
Q Consensus 618 ~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~el 697 (791)
+ +.+|+||||||+||+++.++.+++. ||.+..... .....++.+|+|||+..+..++.++|||||||++|||
T Consensus 800 ~-~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~------~~~~~~t~~y~aPE~~~~~~~~~~sDv~S~Gvvl~el 871 (968)
T PLN00113 800 C-SPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCT------DTKCFISSAYVAPETRETKDITEKSDIYGFGLILIEL 871 (968)
T ss_pred C-CCCeecCCCCHHhEEECCCCceEEE-ecccccccc------CCCccccccccCcccccCCCCCcccchhhHHHHHHHH
Confidence 5 5689999999999999999998876 666544321 1123578999999999999999999999999999999
Q ss_pred HhCCCCCCccccCcchHHHHHHHhcCCC-hhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 698 FTRKRPTDEMFTGEMSLRRWVKESLPHG-LTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 698 ltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
+||+.||+..........+|++...... ...++|+.+.... ....+...++.+++.+||+.||++||+|.||+++|
T Consensus 872 ~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~Cl~~~P~~RPt~~evl~~L 948 (968)
T PLN00113 872 LTGKSPADAEFGVHGSIVEWARYCYSDCHLDMWIDPSIRGDV---SVNQNEIVEVMNLALHCTATDPTARPCANDVLKTL 948 (968)
T ss_pred HhCCCCCCcccCCCCcHHHHHHHhcCccchhheeCccccCCC---CccHHHHHHHHHHHHhhCcCCchhCcCHHHHHHHH
Confidence 9999999765555666777776554432 4445555443221 11223456788999999999999999999999999
Q ss_pred HHHHHHhccccc
Q 003855 777 KKIKVKFLDDAS 788 (791)
Q Consensus 777 ~~~~~~~~~~~~ 788 (791)
+++.+...+..+
T Consensus 949 ~~~~~~~~~~~~ 960 (968)
T PLN00113 949 ESASRSSSSCVT 960 (968)
T ss_pred HHhhcccccccc
Confidence 999776655443
No 2
>KOG1187 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-52 Score=439.78 Aligned_cols=288 Identities=42% Similarity=0.684 Sum_probs=247.6
Q ss_pred cCCCCChhHHHHHhhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeee
Q 003855 487 TWRRTPYLDIQRATDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSC 566 (791)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~ 566 (791)
....+++.+++.+|++|...+.||+|+||.||+|..++|+.||||++........++|..|+.++.+++|||+|+++|||
T Consensus 61 ~~~~fs~~el~~AT~~Fs~~~~ig~Ggfg~VYkG~l~~~~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC 140 (361)
T KOG1187|consen 61 PLRSFSYDELRKATNNFSESNLIGEGGFGTVYKGVLSDGTVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYC 140 (361)
T ss_pred CcceeeHHHHHHHHhCCchhcceecCCCeEEEEEEECCCCEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEE
Confidence 45678999999999999999999999999999999999999999988765432145699999999999999999999999
Q ss_pred ccCC-eeeEEEecCCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEe
Q 003855 567 SNPD-FKALVLEFMPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVS 644 (791)
Q Consensus 567 ~~~~-~~~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~ 644 (791)
.+.+ +.++|||||++|+|.++++.... .++|.+|.+||.++|+||+|||+.+ ..+|+||||||+|||+|+++++||+
T Consensus 141 ~e~~~~~~LVYEym~nGsL~d~L~~~~~~~L~W~~R~kIa~g~A~gL~yLH~~~-~~~iiHrDiKssNILLD~~~~aKls 219 (361)
T KOG1187|consen 141 LEGGEHRLLVYEYMPNGSLEDHLHGKKGEPLDWETRLKIALGAARGLAYLHEGC-PPPIIHRDIKSSNILLDEDFNAKLS 219 (361)
T ss_pred ecCCceEEEEEEccCCCCHHHHhCCCCCCCCCHHHHHHHHHHHHHHHHHHccCC-CCCEecCCCCHHHeeECCCCCEEcc
Confidence 9988 59999999999999999997765 7999999999999999999999876 4479999999999999999999999
Q ss_pred eeccccccCCCCCcceeecc-cccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccc-cCcchHHHHHHHhc
Q 003855 645 DFGISKLLGEGEDSVTQTMT-MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMF-TGEMSLRRWVKESL 722 (791)
Q Consensus 645 Dfgla~~~~~~~~~~~~~~~-~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~-~~~~~~~~~~~~~~ 722 (791)
|||+|+....... ..... .||.+|+|||+...+..+.|+|||||||+++|++||+.|.+... ..+..+..|+....
T Consensus 220 DFGLa~~~~~~~~--~~~~~~~gt~gY~~PEy~~~g~lt~KsDVySFGVvllElitgr~~~d~~~~~~~~~l~~w~~~~~ 297 (361)
T KOG1187|consen 220 DFGLAKLGPEGDT--SVSTTVMGTFGYLAPEYASTGKLTEKSDVYSFGVVLLELITGRKAVDQSRPRGELSLVEWAKPLL 297 (361)
T ss_pred CccCcccCCcccc--ceeeecCCCCccCChhhhccCCcCcccccccchHHHHHHHhCCcccCCCCCcccccHHHHHHHHH
Confidence 9999966543111 11112 79999999999999999999999999999999999999888644 34556899988777
Q ss_pred CC-Chhhhcchhhhh-hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 723 PH-GLTEVVDANLVR-EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 723 ~~-~~~~~~d~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
.. .+.+++|+.+.. +... ......+..++.+|++.+|++||+|.||+++|+.+..
T Consensus 298 ~~~~~~eiiD~~l~~~~~~~----~~~~~~~~~~a~~C~~~~~~~RP~m~~Vv~~L~~~~~ 354 (361)
T KOG1187|consen 298 EEGKLREIVDPRLKEGEYPD----EKEVKKLAELALRCLRPDPKERPTMSQVVKELEGILS 354 (361)
T ss_pred HCcchhheeCCCccCCCCCh----HHHHHHHHHHHHHHcCcCCCcCcCHHHHHHHHHhhcc
Confidence 66 488999999863 2111 1455678999999999999999999999999976644
No 3
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=2e-49 Score=483.87 Aligned_cols=412 Identities=34% Similarity=0.570 Sum_probs=320.3
Q ss_pred CCccCCccccCCCCCCeeecCCCcccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCc
Q 003855 1 MAGQIPTEIGNLQNLQYLVFAENNLSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPH 80 (791)
Q Consensus 1 ~~g~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~ 80 (791)
++|.+|..++++++|++|+|++|.+.+.+|..|.++++|++|+|++|.+.+.+|..+.. +++|++|+|++|.+++.+|.
T Consensus 152 ~~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~-l~~L~~L~L~~n~l~~~~p~ 230 (968)
T PLN00113 152 LSGEIPNDIGSFSSLKVLDLGGNVLVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQ-MKSLKWIYLGYNNLSGEIPY 230 (968)
T ss_pred ccccCChHHhcCCCCCEEECccCcccccCChhhhhCcCCCeeeccCCCCcCcCChHHcC-cCCccEEECcCCccCCcCCh
Confidence 35789999999999999999999999999999999999999999999999889988877 89999999999999999999
Q ss_pred cCcCCCCCCEEeccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCCh
Q 003855 81 SITNATKLVALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPP 160 (791)
Q Consensus 81 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 160 (791)
.|+++++|++|+|++|.+.+..+..|.++++|+.|++++|++.... +..+.++++|+.|++++|.+.+.+|.
T Consensus 231 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~--------p~~l~~l~~L~~L~Ls~n~l~~~~p~ 302 (968)
T PLN00113 231 EIGGLTSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPI--------PPSIFSLQKLISLDLSDNSLSGEIPE 302 (968)
T ss_pred hHhcCCCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccC--------chhHhhccCcCEEECcCCeeccCCCh
Confidence 9999999999999999999999999999999999999999987532 33456666677777777766666666
Q ss_pred hhhhhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccc---
Q 003855 161 VIGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCH--- 237 (791)
Q Consensus 161 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~--- 237 (791)
.+..+ .+|+.|++++|.+.+..|..+..+++|+.|+|++|.+++..|..++.+++|+.|+|++|++++.+|..++.
T Consensus 303 ~~~~l-~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~ 381 (968)
T PLN00113 303 LVIQL-QNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGN 381 (968)
T ss_pred hHcCC-CCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCC
Confidence 55544 34666666666666666666666666666666666666555666666666666666666655555555544
Q ss_pred ---------------------cCCCceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccC
Q 003855 238 ---------------------LKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSS 296 (791)
Q Consensus 238 ---------------------l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 296 (791)
+++|+.|++++|++++..|..+.++++|+.|++++|++.+..+..+..+++|+.|++++
T Consensus 382 L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~ 461 (968)
T PLN00113 382 LFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLAR 461 (968)
T ss_pred CCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcC
Confidence 44555555555555544555555555555555555555555555555555666666666
Q ss_pred CcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccccccccCCCCCCcccCCCCCCcEEEccCCccCCCCc
Q 003855 297 NSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLSGKIP 376 (791)
Q Consensus 297 N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 376 (791)
|.+.+..|..+ ..++|+.|++++|++++..|..+..+++|+.|+|++|++.+.+|..+..+++|+.|+|++|.+++.+|
T Consensus 462 n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~p 540 (968)
T PLN00113 462 NKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQIP 540 (968)
T ss_pred ceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCcccccCC
Confidence 66655555544 34678888888888888888889999999999999999999999999999999999999999999999
Q ss_pred hhhhhcccCceEEccCCCCcccCCCC-CCCcCCccccccCCccccCCC
Q 003855 377 KSLETLSQLKQFNVSHNRLEGEIPVK-GSFKNFSVESFFGNYALCGPP 423 (791)
Q Consensus 377 ~~~~~l~~L~~l~l~~N~l~~~~~~~-~~~~~l~~~~~~~n~~~c~~~ 423 (791)
..|..+++|+.|+|++|++++.+|.. ..+..++.+.+.+|+..+.-|
T Consensus 541 ~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l~~~~p 588 (968)
T PLN00113 541 ASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHLHGSLP 588 (968)
T ss_pred hhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcceeeCC
Confidence 99999999999999999999988863 557788889999998876544
No 4
>KOG0192 consensus Tyrosine kinase specific for activated (GTP-bound) p21cdc42Hs [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-47 Score=401.94 Aligned_cols=260 Identities=31% Similarity=0.475 Sum_probs=214.8
Q ss_pred ccccccccCCCcceEEEEEEecCCcEEEEEEeehhhh--HHHHHHHHHHHHHHhccCCccceeeeeeccCC-eeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSCSNPD-FKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~e~ 578 (791)
++...+.+|+|+||+||+|.++....||||++..... ...+.|.+|+.+|.+++|||||+++|+|.++. ..++||||
T Consensus 42 ~l~~~~~iG~G~~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~~~~~~~iVtEy 121 (362)
T KOG0192|consen 42 ELPIEEVLGSGSFGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTSPPGSLCIVTEY 121 (362)
T ss_pred HhhhhhhcccCCceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCceEEEEEe
Confidence 3445566999999999999996544499999976542 22568999999999999999999999999887 78999999
Q ss_pred CCCCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCC-eEecCCCCCCeEeCCCC-cEEEeeeccccccCCC
Q 003855 579 MPNGSLEKWLYS-HNYFLDILERLNIMIDVGSALEYLHHGHSSAP-IIHCDLKPTNILLDENM-AAHVSDFGISKLLGEG 655 (791)
Q Consensus 579 ~~~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~-i~H~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~ 655 (791)
+++|+|.++++. ....+++..+.++|.|||+||.||| +.+ ||||||||+|||++.++ ++||+|||+++.....
T Consensus 122 ~~~GsL~~~l~~~~~~~l~~~~~l~~aldiArGm~YLH----~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~ 197 (362)
T KOG0192|consen 122 MPGGSLSVLLHKKRKRKLPLKVRLRIALDIARGMEYLH----SEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVIS 197 (362)
T ss_pred CCCCcHHHHHhhcccCCCCHHHHHHHHHHHHHHHHHHh----cCCCeeecccChhhEEEcCCCCEEEECCCccceeeccc
Confidence 999999999998 4667999999999999999999999 556 99999999999999998 9999999999876543
Q ss_pred CCcceeecccccccccCCCccC--CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGS--EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~--~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
. ...+...||+.|||||++. ...|+.|+|||||||++|||+||+.||...... ......+....+
T Consensus 198 ~--~~~~~~~GT~~wMAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~-~~~~~v~~~~~R---------- 264 (362)
T KOG0192|consen 198 K--TSMTSVAGTYRWMAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPV-QVASAVVVGGLR---------- 264 (362)
T ss_pred c--ccccCCCCCccccChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhcCCC----------
Confidence 2 2333367999999999999 669999999999999999999999999876542 111111111111
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhcc
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKFLD 785 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~~~ 785 (791)
.+-+..|+..+..++.+||+.||+.||++.+++..|+.+......
T Consensus 265 -------p~~p~~~~~~l~~l~~~CW~~dp~~RP~f~ei~~~l~~~~~~~~~ 309 (362)
T KOG0192|consen 265 -------PPIPKECPPHLSSLMERCWLVDPSRRPSFLEIVSRLESIMSHISS 309 (362)
T ss_pred -------CCCCccCCHHHHHHHHHhCCCCCCcCCCHHHHHHHHHHHHHhhcc
Confidence 111223677888999999999999999999999999999876654
No 5
>KOG0197 consensus Tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.8e-48 Score=404.16 Aligned_cols=256 Identities=30% Similarity=0.507 Sum_probs=219.5
Q ss_pred hccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
+.+..++.||+|.||+||.|.++...+||+|.++... -..++|.+|+.+|++++|++||+++|+|..++.++||||||+
T Consensus 206 ~~l~l~~~LG~G~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~~~~piyIVtE~m~ 284 (468)
T KOG0197|consen 206 EELKLIRELGSGQFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCTKQEPIYIVTEYMP 284 (468)
T ss_pred HHHHHHHHhcCCccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEecCCceEEEEEecc
Confidence 3455678999999999999999888899999987642 234678899999999999999999999999889999999999
Q ss_pred CCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 581 NGSLEKWLYS-HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 581 ~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
.|+|.+||+. .+..+...+...++.|||+||+||+ ++++|||||.++||||+++..|||+|||+|+...+.. +.
T Consensus 285 ~GsLl~yLr~~~~~~l~~~~Ll~~a~qIaeGM~YLe----s~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~-Y~ 359 (468)
T KOG0197|consen 285 KGSLLDYLRTREGGLLNLPQLLDFAAQIAEGMAYLE----SKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDE-YT 359 (468)
T ss_pred cCcHHHHhhhcCCCccchHHHHHHHHHHHHHHHHHH----hCCccchhhhhhheeeccCceEEEcccccccccCCCc-ee
Confidence 9999999997 5667899999999999999999999 7889999999999999999999999999999554433 32
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
......-+..|.|||.+..+.++.|||||||||+||||+| |+.||+.+...+. + ...+.+
T Consensus 360 ~~~~~kfPIkWtAPEa~~~~~FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev-----~--------------~~le~G 420 (468)
T KOG0197|consen 360 ASEGGKFPIKWTAPEALNYGKFSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEV-----L--------------ELLERG 420 (468)
T ss_pred ecCCCCCCceecCHHHHhhCCcccccceeehhhhHHHHhccCCCCCCCCCHHHH-----H--------------HHHhcc
Confidence 3333345678999999999999999999999999999999 8889877533221 1 123345
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
.+.+.+..||..+.++|..||+.+|++||||..+...++.+..
T Consensus 421 yRlp~P~~CP~~vY~lM~~CW~~~P~~RPtF~~L~~~l~~~~~ 463 (468)
T KOG0197|consen 421 YRLPRPEGCPDEVYELMKSCWHEDPEDRPTFETLREVLEDFFT 463 (468)
T ss_pred CcCCCCCCCCHHHHHHHHHHhhCCcccCCCHHHHHHHHHHhhh
Confidence 5667788999999999999999999999999999988888754
No 6
>KOG0581 consensus Mitogen-activated protein kinase kinase (MAP2K) [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-47 Score=375.60 Aligned_cols=254 Identities=23% Similarity=0.321 Sum_probs=210.5
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCC-eeeEEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPD-FKALVL 576 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-~~~lv~ 576 (791)
.++.+..+.||+|..|+|||++++ +++.+|+|++.... ....+++.+|+++++..+||+||.++|+|.... ...++|
T Consensus 78 ~~dle~~~~lG~G~gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~~~~~~isI~m 157 (364)
T KOG0581|consen 78 LSDLERLGVLGSGNGGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFYSNGEEISICM 157 (364)
T ss_pred HHHhhhhhhcccCCCcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEEeCCceEEeeh
Confidence 345667789999999999999986 78889999995443 445678999999999999999999999999888 599999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
|||.+|||.+++...+. +++....+|+.+|++||.|||+ .+.||||||||+|||++..|+|||||||.++.+-+.
T Consensus 158 EYMDgGSLd~~~k~~g~-i~E~~L~~ia~~VL~GL~YLh~---~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS- 232 (364)
T KOG0581|consen 158 EYMDGGSLDDILKRVGR-IPEPVLGKIARAVLRGLSYLHE---ERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNS- 232 (364)
T ss_pred hhcCCCCHHHHHhhcCC-CCHHHHHHHHHHHHHHHHHHhh---ccCeeeccCCHHHeeeccCCCEEeccccccHHhhhh-
Confidence 99999999999986644 8999999999999999999995 468999999999999999999999999999887543
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
.....+||..|||||.+.+..|+.++||||||++++|+.+|+.||....+..... .+.++.-+.+
T Consensus 233 ---~a~tfvGT~~YMsPERi~g~~Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~------------~~Ll~~Iv~~ 297 (364)
T KOG0581|consen 233 ---IANTFVGTSAYMSPERISGESYSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDI------------FELLCAIVDE 297 (364)
T ss_pred ---hcccccccccccChhhhcCCcCCcccceecccHHHHHHhhCCCCCCCcCCCCCCH------------HHHHHHHhcC
Confidence 2344689999999999999999999999999999999999999987642211111 1222222221
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.....+.. .+++++.+++..|+++||.+||++.|+++
T Consensus 298 ppP~lP~~-~fS~ef~~FV~~CL~Kdp~~R~s~~qLl~ 334 (364)
T KOG0581|consen 298 PPPRLPEG-EFSPEFRSFVSCCLRKDPSERPSAKQLLQ 334 (364)
T ss_pred CCCCCCcc-cCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 22222221 47888999999999999999999999876
No 7
>KOG0595 consensus Serine/threonine-protein kinase involved in autophagy [Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-46 Score=368.70 Aligned_cols=200 Identities=33% Similarity=0.533 Sum_probs=181.8
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehh--hhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
..+|...+.||+|+||+||+|+++ ++..||||.+... ..+..+.+..|+.+++.++|||||++++++.+++..++||
T Consensus 9 ~~~y~~~~~iG~GsfavVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~~~~~~i~lVM 88 (429)
T KOG0595|consen 9 VGDYELSREIGSGSFAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCIEDDDFIYLVM 88 (429)
T ss_pred cccceehhhccCcceEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEEecCCeEEEEE
Confidence 467888899999999999999975 7899999999776 4566778899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC------CcEEEeeecccc
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN------MAAHVSDFGISK 650 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~------~~~kl~Dfgla~ 650 (791)
|||.||||.+|++.++. +++.....++.|+|.||++|| +++||||||||.|||++.. -.+||+|||+|+
T Consensus 89 EyC~gGDLs~yi~~~~~-l~e~t~r~Fm~QLA~alq~L~----~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR 163 (429)
T KOG0595|consen 89 EYCNGGDLSDYIRRRGR-LPEATARHFMQQLASALQFLH----ENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFAR 163 (429)
T ss_pred EeCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCcceEEeccCCCCCCCceEEecccchhh
Confidence 99999999999998765 899999999999999999999 7889999999999999864 568999999999
Q ss_pred ccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCcc
Q 003855 651 LLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM 707 (791)
Q Consensus 651 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~ 707 (791)
.+.++.. ....+|++-|||||++..++|+.|+|+||.|+|+|+|++|+.||+..
T Consensus 164 ~L~~~~~---a~tlcGSplYMAPEV~~~~~YdAKADLWSiG~Ilyq~l~g~~Pf~a~ 217 (429)
T KOG0595|consen 164 FLQPGSM---AETLCGSPLYMAPEVIMSQQYDAKADLWSIGTILYQCLTGKPPFDAE 217 (429)
T ss_pred hCCchhH---HHHhhCCccccCHHHHHhccccchhhHHHHHHHHHHHHhCCCCcccc
Confidence 9875432 33468999999999999999999999999999999999999999864
No 8
>KOG1026 consensus Nerve growth factor receptor TRKA and related tyrosine kinases [Signal transduction mechanisms; Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=7e-46 Score=403.42 Aligned_cols=263 Identities=28% Similarity=0.463 Sum_probs=225.4
Q ss_pred hccccccccCCCcceEEEEEEec------CCcEEEEEEeehhhhH-HHHHHHHHHHHHHhccCCccceeeeeeccCCeee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQLER-AFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 573 (791)
.+.+..+.||+|+||.||+|+.. +.+.||||.++...+. ..++|++|+++++.++|||||+++|.|.+++..+
T Consensus 486 ~~i~~~~eLGegaFGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC~~~~P~~ 565 (774)
T KOG1026|consen 486 SDIVFKEELGEGAFGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVCREGDPLC 565 (774)
T ss_pred hheeehhhhcCchhhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEccCCeeE
Confidence 45566789999999999999842 4567999999887765 7789999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhC-------------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCc
Q 003855 574 LVLEFMPNGSLEKWLYSH-------------NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMA 640 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~-------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~ 640 (791)
+|+|||..|||.+||+.+ ..+++..+.+.||.|||.||+||- ++.+|||||.++|+||.++..
T Consensus 566 MvFEYm~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA~QIAaGM~YLs----~~~FVHRDLATRNCLVge~l~ 641 (774)
T KOG1026|consen 566 MVFEYMDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIATQIAAGMEYLS----SHHFVHRDLATRNCLVGENLV 641 (774)
T ss_pred EEEEecccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCcccccchhhhhceeccceE
Confidence 999999999999999842 123788999999999999999998 677999999999999999999
Q ss_pred EEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHH
Q 003855 641 AHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVK 719 (791)
Q Consensus 641 ~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 719 (791)
|||+|||+++.....+++.......-+++|||||.+..++||+++||||||||+||+++ |+.||.+....+.
T Consensus 642 VKIsDfGLsRdiYssDYYk~~~~t~lPIRWMppEsIly~kFTteSDVWs~GVvLWEIFsyG~QPy~glSn~EV------- 714 (774)
T KOG1026|consen 642 VKISDFGLSRDIYSSDYYKVRGNTLLPIRWMPPESILYGKFTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEV------- 714 (774)
T ss_pred EEecccccchhhhhhhhhcccCCceeeeecCCHHHhhcCcccchhhhhhhhhhhhhhhccccCcccccchHHH-------
Confidence 99999999998877776665555566889999999999999999999999999999999 9999987543321
Q ss_pred HhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhccc
Q 003855 720 ESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKFLDD 786 (791)
Q Consensus 720 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~~~~ 786 (791)
++ ...++...+.++.||.++++||.+||+..|++||+|+||-..|..........
T Consensus 715 ----------Ie--~i~~g~lL~~Pe~CP~~vY~LM~~CW~~~P~~RPsF~eI~~~L~~~~~~s~~~ 769 (774)
T KOG1026|consen 715 ----------IE--CIRAGQLLSCPENCPTEVYSLMLECWNENPKRRPSFKEIHSRLQAWAQASPKY 769 (774)
T ss_pred ----------HH--HHHcCCcccCCCCCCHHHHHHHHHHhhcCcccCCCHHHHHHHHHHHHhcCccc
Confidence 11 11122235667789999999999999999999999999999999886655443
No 9
>KOG0575 consensus Polo-like serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.4e-45 Score=381.51 Aligned_cols=247 Identities=24% Similarity=0.359 Sum_probs=210.3
Q ss_pred hccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
..|...+.||+|||+.||.++. .+|+.||+|++.+.. ..+.+...+|+++.++++|||||+++++|++.+.+|+|.
T Consensus 18 ~~Y~~g~~LGkGgFA~cYe~~~~~tge~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~FEDs~nVYivL 97 (592)
T KOG0575|consen 18 KRYKRGRFLGKGGFARCYEARDLDTGEVVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFFEDSNNVYIVL 97 (592)
T ss_pred ceeeeeeeeccCcceEEEEEEEcCCCcEEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEeecCCceEEEE
Confidence 5689999999999999999997 799999999998653 455678899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
|+|++|+|..+++ ....+++.++..+++||+.||.||| +.+|+|||||..|+|++++.+|||+|||+|+.+...+
T Consensus 98 ELC~~~sL~el~K-rrk~ltEpEary~l~QIv~GlkYLH----~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~ 172 (592)
T KOG0575|consen 98 ELCHRGSLMELLK-RRKPLTEPEARYFLRQIVEGLKYLH----SLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDG 172 (592)
T ss_pred EecCCccHHHHHH-hcCCCCcHHHHHHHHHHHHHHHHHH----hcCceecccchhheeecCcCcEEecccceeeeecCcc
Confidence 9999999999888 4456999999999999999999999 7889999999999999999999999999999886442
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
. .....+||+.|+|||++.....+..+||||+|||||-|++|++||+...- ...+.+. ..
T Consensus 173 E--rk~TlCGTPNYIAPEVl~k~gHsfEvDiWSlGcvmYtLL~G~PPFetk~v-kety~~I-----------------k~ 232 (592)
T KOG0575|consen 173 E--RKKTLCGTPNYIAPEVLNKSGHSFEVDIWSLGCVMYTLLVGRPPFETKTV-KETYNKI-----------------KL 232 (592)
T ss_pred c--ccceecCCCcccChhHhccCCCCCchhhhhhhhHHHhhhhCCCCcccchH-HHHHHHH-----------------Hh
Confidence 2 22335799999999999999999999999999999999999999976211 1111111 11
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.. ..-+...+.+..++|.++|+.||++|||+.+|+.
T Consensus 233 ~~--Y~~P~~ls~~A~dLI~~lL~~~P~~Rpsl~~vL~ 268 (592)
T KOG0575|consen 233 NE--YSMPSHLSAEAKDLIRKLLRPNPSERPSLDEVLD 268 (592)
T ss_pred cC--cccccccCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 11 1112245566789999999999999999999985
No 10
>KOG0591 consensus NIMA (never in mitosis)-related G2-specific serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=7e-46 Score=350.34 Aligned_cols=257 Identities=23% Similarity=0.359 Sum_probs=206.0
Q ss_pred hhccccccccCCCcceEEEEEE-ecCCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeee-eccC-CeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGT-ISDGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSS-CSNP-DFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~-~~~~-~~~~l 574 (791)
..+|++.++||+|.||+||++. ..+|..||.|.+.-.. .+..+....|+.++++++|||||+++++ +.+. ...++
T Consensus 18 l~~y~Il~~IG~GsFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~~f~~~~evlni 97 (375)
T KOG0591|consen 18 LADYQILKKIGRGSFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAHSFIEDNEVLNI 97 (375)
T ss_pred HHHHHHHHHHcCCcchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHHhhhccchhhHH
Confidence 3578899999999999999997 4689999999886432 4556788999999999999999999984 3333 44899
Q ss_pred EEecCCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 575 VLEFMPNGSLEKWLY---SHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 575 v~e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
|||||.+|||.+.++ +.+..+++..+|++..|++.||.++|..-+..-|+||||||.||+++.+|.||++|||+++.
T Consensus 98 vmE~c~~GDLsqmIk~~K~qkr~ipE~~Vwk~f~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~ 177 (375)
T KOG0591|consen 98 VMELCDAGDLSQMIKHFKKQKRLIPEKTVWKYFVQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRF 177 (375)
T ss_pred HHHhhcccCHHHHHHHHHhccccCchHHHHHHHHHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhH
Confidence 999999999999987 45667999999999999999999999522223399999999999999999999999999998
Q ss_pred cCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 652 LGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 652 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
+.... ......+|||.||+||.+.+..|+.|+||||+||++|||+.-++||.+. .+....+. +.++
T Consensus 178 l~s~~--tfA~S~VGTPyYMSPE~i~~~~Y~~kSDiWslGCllyEMcaL~~PF~g~-----n~~~L~~K-I~qg------ 243 (375)
T KOG0591|consen 178 LSSKT--TFAHSLVGTPYYMSPERIHESGYNFKSDIWSLGCLLYEMCALQSPFYGD-----NLLSLCKK-IEQG------ 243 (375)
T ss_pred hcchh--HHHHhhcCCCcccCHHHHhcCCCCcchhHHHHHHHHHHHHhcCCCcccc-----cHHHHHHH-HHcC------
Confidence 86543 2344568999999999999999999999999999999999999999763 22221111 1111
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
+... -....++.++.++|..|+.+||+.||+...+++.+
T Consensus 244 -----d~~~-~p~~~YS~~l~~li~~ci~vd~~~RP~t~~~v~di 282 (375)
T KOG0591|consen 244 -----DYPP-LPDEHYSTDLRELINMCIAVDPEQRPDTVPYVQDI 282 (375)
T ss_pred -----CCCC-CcHHHhhhHHHHHHHHHccCCcccCCCcchHHHHH
Confidence 0000 11246778899999999999999999854444433
No 11
>KOG0615 consensus Serine/threonine protein kinase Chk2 and related proteins [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.6e-45 Score=362.31 Aligned_cols=253 Identities=28% Similarity=0.379 Sum_probs=205.5
Q ss_pred HhhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhhh-------HHHHHHHHHHHHHHhccCCccceeeeeeccCC
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQLE-------RAFRSFDSECEVLRNVRHRNLIKILSSCSNPD 570 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~-------~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 570 (791)
..+.|.+.+.+|+|+||.|-+|.. ++|+.||||++.+... .......+|+++|++++|||||++++++..++
T Consensus 170 ~~d~yii~~~LGsGafg~Vkla~e~~tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f~~~d 249 (475)
T KOG0615|consen 170 FNDYYIISKTLGSGAFGLVKLAYEKKTGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFFEVPD 249 (475)
T ss_pred hcceeEeeeeecCCceeEEEEEEEcccCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeeeecCC
Confidence 346788899999999999999985 5899999999975431 12234679999999999999999999999999
Q ss_pred eeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC---CcEEEeeec
Q 003855 571 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN---MAAHVSDFG 647 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~---~~~kl~Dfg 647 (791)
..|+||||++||+|.+++-.++. +.+..-.-+++|++.|+.||| +.||+||||||+|||+..+ -.+||+|||
T Consensus 250 s~YmVlE~v~GGeLfd~vv~nk~-l~ed~~K~~f~Qll~avkYLH----~~GI~HRDiKPeNILl~~~~e~~llKItDFG 324 (475)
T KOG0615|consen 250 SSYMVLEYVEGGELFDKVVANKY-LREDLGKLLFKQLLTAVKYLH----SQGIIHRDIKPENILLSNDAEDCLLKITDFG 324 (475)
T ss_pred ceEEEEEEecCccHHHHHHhccc-cccchhHHHHHHHHHHHHHHH----HcCcccccCCcceEEeccCCcceEEEecccc
Confidence 99999999999999999987765 677777889999999999999 7899999999999999755 779999999
Q ss_pred cccccCCCCCcceeecccccccccCCCccCCCC---CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC
Q 003855 648 ISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGI---VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH 724 (791)
Q Consensus 648 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 724 (791)
+|+..+.+ ..+...+||+.|.|||++.++. +..++|+||+|||+|-+++|.+||.+.........+..+..+..
T Consensus 325 lAK~~g~~---sfm~TlCGTpsYvAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f 401 (475)
T KOG0615|consen 325 LAKVSGEG---SFMKTLCGTPSYVAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAF 401 (475)
T ss_pred hhhccccc---eehhhhcCCccccChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccc
Confidence 99987643 2345578999999999987654 33478999999999999999999987433221111111111100
Q ss_pred ChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 725 GLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 725 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+.+.+++++..++|.+||..||++||++.|+++
T Consensus 402 ---------------~p~~w~~Iseea~dlI~~mL~VdP~~R~s~~eaL~ 436 (475)
T KOG0615|consen 402 ---------------GPLQWDRISEEALDLINWMLVVDPENRPSADEALN 436 (475)
T ss_pred ---------------cChhhhhhhHHHHHHHHHhhEeCcccCcCHHHHhc
Confidence 11344567788999999999999999999999985
No 12
>KOG0593 consensus Predicted protein kinase KKIAMRE [General function prediction only]
Probab=100.00 E-value=2.1e-44 Score=343.76 Aligned_cols=264 Identities=22% Similarity=0.270 Sum_probs=206.3
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++.|+...++|+|+||+|||++.+ +|+.||||++.... ....+-..+|++++++++|||+|.++++|......++||
T Consensus 1 MekYE~LgkvGEGSYGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVFrrkrklhLVF 80 (396)
T KOG0593|consen 1 MEKYEKLGKVGEGSYGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVFRRKRKLHLVF 80 (396)
T ss_pred CcHHhhhhccccCcceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHHHhcceeEEEe
Confidence 357888999999999999999976 79999999996543 234456789999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
|||+. ++.+-+.......+...+.++++|+++|+.|+| +.+++||||||+|||++.+|.+|+||||+|+.+....
T Consensus 81 E~~dh-TvL~eLe~~p~G~~~~~vk~~l~Q~l~ai~~cH----k~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pg 155 (396)
T KOG0593|consen 81 EYCDH-TVLHELERYPNGVPSELVKKYLYQLLKAIHFCH----KNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPG 155 (396)
T ss_pred eecch-HHHHHHHhccCCCCHHHHHHHHHHHHHHhhhhh----hcCeecccCChhheEEecCCcEEeccchhhHhhcCCc
Confidence 99987 666667766666999999999999999999999 7789999999999999999999999999999987433
Q ss_pred CcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHH--HHHhcCCC---hhhhc
Q 003855 657 DSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRW--VKESLPHG---LTEVV 730 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~--~~~~~~~~---~~~~~ 730 (791)
+ ..+-.+.|++|+|||.+.+ ..|...+||||.||++.||++|.+-|++ +.++.+. +......- -..++
T Consensus 156 d--~YTDYVATRWYRaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG----~SDiDQLy~I~ktLG~L~prhq~iF 229 (396)
T KOG0593|consen 156 D--NYTDYVATRWYRAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPG----RSDIDQLYLIRKTLGNLIPRHQSIF 229 (396)
T ss_pred c--hhhhhhhhhhccChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCC----cchHHHHHHHHHHHcccCHHHHHHh
Confidence 2 2344578999999998765 7899999999999999999999988765 3333332 22221111 11111
Q ss_pred chh----------hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 731 DAN----------LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 731 d~~----------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+ ..........-.....-+.+++..|++.||++|++.+|++.
T Consensus 230 ~~N~~F~Gv~lP~~~~~epLe~k~p~~s~~~ld~~k~cL~~dP~~R~sc~qll~ 283 (396)
T KOG0593|consen 230 SSNPFFHGVRLPEPEHPEPLERKYPKISNVLLDLLKKCLKMDPDDRLSCEQLLH 283 (396)
T ss_pred ccCCceeeeecCCCCCccchhhhcccchHHHHHHHHHHhcCCccccccHHHHhc
Confidence 111 00000000111133456889999999999999999999874
No 13
>KOG0196 consensus Tyrosine kinase, EPH (ephrin) receptor family [Signal transduction mechanisms]
Probab=100.00 E-value=8.2e-46 Score=393.65 Aligned_cols=258 Identities=26% Similarity=0.472 Sum_probs=224.1
Q ss_pred cccccccCCCcceEEEEEEec----CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 503 FNECNLLGTGSFGSVYKGTIS----DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
..+.++||.|.||+||+|+++ ....||||.++... +++.++|..|+.+|.+++||||+++-|+.......++|.|
T Consensus 631 i~Ie~VIGaGEFGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVVTks~PvMIiTE 710 (996)
T KOG0196|consen 631 VKIEKVIGAGEFGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVVTKSKPVMIITE 710 (996)
T ss_pred eEEEEEEecccccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEEecCceeEEEhh
Confidence 456789999999999999975 24569999998654 6678899999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
||++|+|..||+.+..++.+.+...+.++||.|+.||. .+++|||||.++||||+.+..+|++|||++|.+.++..
T Consensus 711 yMENGsLDsFLR~~DGqftviQLVgMLrGIAsGMkYLs----dm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~ 786 (996)
T KOG0196|consen 711 YMENGSLDSFLRQNDGQFTVIQLVGMLRGIASGMKYLS----DMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPE 786 (996)
T ss_pred hhhCCcHHHHHhhcCCceEeehHHHHHHHHHHHhHHHh----hcCchhhhhhhhheeeccceEEEeccccceeecccCCC
Confidence 99999999999999888999999999999999999999 78999999999999999999999999999998865542
Q ss_pred c-ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 658 S-VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 658 ~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
. .....-.-+.+|.|||.+..+++|.++|||||||||||.++ |.+||.++.+.+. ++ -.
T Consensus 787 ~~ytt~GGKIPiRWTAPEAIa~RKFTsASDVWSyGIVmWEVmSyGERPYWdmSNQdV-----Ik--------------aI 847 (996)
T KOG0196|consen 787 AAYTTLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-----IK--------------AI 847 (996)
T ss_pred ccccccCCccceeecChhHhhhcccCchhhccccceEEEEecccCCCcccccchHHH-----HH--------------HH
Confidence 1 11111223578999999999999999999999999999887 9999987644321 11 13
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
+++.+.+.+++||..+.+||..||++|-.+||.|.|++..|.++.++-
T Consensus 848 e~gyRLPpPmDCP~aL~qLMldCWqkdR~~RP~F~qiV~~lDklIrnP 895 (996)
T KOG0196|consen 848 EQGYRLPPPMDCPAALYQLMLDCWQKDRNRRPKFAQIVSTLDKLIRNP 895 (996)
T ss_pred HhccCCCCCCCCcHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHhcCc
Confidence 345567889999999999999999999999999999999999986653
No 14
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-46 Score=381.67 Aligned_cols=372 Identities=23% Similarity=0.263 Sum_probs=199.8
Q ss_pred CeeecCCCcccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCCEEeccC
Q 003855 16 QYLVFAENNLSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLVALDLGF 95 (791)
Q Consensus 16 ~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 95 (791)
+.||+|+|+|..+.+..|.++++|+++++.+|.++ .||..... ..+|+.|+|.+|.|+.+....+..++.|+.||||.
T Consensus 81 ~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~-sghl~~L~L~~N~I~sv~se~L~~l~alrslDLSr 158 (873)
T KOG4194|consen 81 QTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHE-SGHLEKLDLRHNLISSVTSEELSALPALRSLDLSR 158 (873)
T ss_pred eeeeccccccccCcHHHHhcCCcceeeeeccchhh-hccccccc-ccceeEEeeeccccccccHHHHHhHhhhhhhhhhh
Confidence 44555555555555555555555555555555555 55554332 44555555555555555555555555555555555
Q ss_pred ccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChhhhhhhhhhhhhhcc
Q 003855 96 NSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPVIGNFSASLQKFYAY 175 (791)
Q Consensus 96 N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~l~ 175 (791)
|.|+.+....|..-.++++|+|+.|+|+++..+. |.++.+|..|.|+.|+|+.. |...++..+.|+.|+|.
T Consensus 159 N~is~i~~~sfp~~~ni~~L~La~N~It~l~~~~--------F~~lnsL~tlkLsrNrittL-p~r~Fk~L~~L~~LdLn 229 (873)
T KOG4194|consen 159 NLISEIPKPSFPAKVNIKKLNLASNRITTLETGH--------FDSLNSLLTLKLSRNRITTL-PQRSFKRLPKLESLDLN 229 (873)
T ss_pred chhhcccCCCCCCCCCceEEeecccccccccccc--------ccccchheeeecccCccccc-CHHHhhhcchhhhhhcc
Confidence 5555555555555555555555555555555443 55555555555555555533 33333323445555555
Q ss_pred cccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecCCccCCCC
Q 003855 176 ECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLSGHI 255 (791)
Q Consensus 176 ~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~ 255 (791)
.|+|..+---.|.+|++|+.|.|..|+|.....++|..+.++++|+|+.|+++..-..++.+++.|+.|+||+|.|..+.
T Consensus 230 rN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih 309 (873)
T KOG4194|consen 230 RNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIH 309 (873)
T ss_pred ccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheee
Confidence 55555443444555555555555555555555555555555555555555555444555555555555555555555555
Q ss_pred CccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCC---cchh
Q 003855 256 PPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIP---STIG 332 (791)
Q Consensus 256 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~ 332 (791)
++.+...++|++|+|++|+|+...+.+|..+..|+.|+|++|.|.......|..+++|+.|||++|.|+..+. ..|.
T Consensus 310 ~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~ 389 (873)
T KOG4194|consen 310 IDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFN 389 (873)
T ss_pred cchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhc
Confidence 5555555555555555555555555555555555555555555554444455555555555555555543322 2344
Q ss_pred ccccccccccccccCCCCCCcccCCCCCCcEEEccCCccCCCCchhhhhcccCceEEccCCCCcccC
Q 003855 333 ALKDLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQLKQFNVSHNRLEGEI 399 (791)
Q Consensus 333 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~ 399 (791)
++++|+.|.|.+|+|+.....+|.+++.|+.|||.+|.|..+-|.+|..+ .|++|-++.-.+-|.+
T Consensus 390 gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~nSssflCDC 455 (873)
T KOG4194|consen 390 GLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMNSSSFLCDC 455 (873)
T ss_pred cchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhcccceEEec
Confidence 55555555555555553333455555555555555555555555555555 5555555444444433
No 15
>KOG0193 consensus Serine/threonine protein kinase RAF [Signal transduction mechanisms]
Probab=100.00 E-value=9.5e-44 Score=369.76 Aligned_cols=262 Identities=26% Similarity=0.449 Sum_probs=213.3
Q ss_pred HhhccccccccCCCcceEEEEEEecCCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
-.+++.+...||+|.||+||+|+|. .+||||+++... .++.+.|+.|+.++++-+|.||+-++|||..+.. .+|+
T Consensus 390 p~~ev~l~~rIGsGsFGtV~Rg~wh--GdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~~p~~-AIiT 466 (678)
T KOG0193|consen 390 PPEEVLLGERIGSGSFGTVYRGRWH--GDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACMNPPL-AIIT 466 (678)
T ss_pred CHHHhhccceeccccccceeecccc--cceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhcCCce-eeee
Confidence 3455667889999999999999985 369999997653 4578899999999999999999999999998887 9999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
.+|+|-+|..+++.....++..+...||+|||+|+.||| .++|||||||..|||+.+++.|||+|||++..-....
T Consensus 467 qwCeGsSLY~hlHv~etkfdm~~~idIAqQiaqGM~YLH----AK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~ 542 (678)
T KOG0193|consen 467 QWCEGSSLYTHLHVQETKFDMNTTIDIAQQIAQGMDYLH----AKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWS 542 (678)
T ss_pred hhccCchhhhhccchhhhhhHHHHHHHHHHHHHhhhhhh----hhhhhhhhccccceEEccCCcEEEecccceeeeeeec
Confidence 999999999999977777999999999999999999999 7899999999999999999999999999997654432
Q ss_pred CcceeecccccccccCCCccCC---CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSE---GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
........-|...|||||++.. ..|++.+||||||+|+|||+||..||.. ...+..+. .+.++ ++.+.
T Consensus 543 g~~q~~qp~gsilwmAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi-~~~dqIif-----mVGrG---~l~pd 613 (678)
T KOG0193|consen 543 GEQQLEQPHGSLLWMAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSI-QNRDQIIF-----MVGRG---YLMPD 613 (678)
T ss_pred cccccCCCccchhhhcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCC-CChhheEE-----Eeccc---ccCcc
Confidence 2223333457888999998754 5699999999999999999999999984 22221110 01111 00000
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
. ......|+.++.+|+..||..+|++||.+.+++.+|+.+...
T Consensus 614 ~------s~~~s~~pk~mk~Ll~~C~~~~~~eRP~F~~il~~l~~l~~~ 656 (678)
T KOG0193|consen 614 L------SKIRSNCPKAMKRLLSDCWKFDREERPLFPQLLSKLEELLPS 656 (678)
T ss_pred c------hhhhccCHHHHHHHHHHHHhcCcccCccHHHHHHHHHHhhhc
Confidence 0 111236888999999999999999999999999999888664
No 16
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=9e-45 Score=373.65 Aligned_cols=401 Identities=22% Similarity=0.222 Sum_probs=360.2
Q ss_pred CCeeecCCCcccccCCccccCC--CCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCCEEe
Q 003855 15 LQYLVFAENNLSGLVPPTIFNI--STMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLVALD 92 (791)
Q Consensus 15 L~~L~Ls~n~l~~~~~~~~~~l--~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 92 (791)
-..||+++++|..+.-..+.++ +.-+.|++++|+|+ .+...+|..+++|+++++..|.++ .+|.......+|+.|+
T Consensus 54 ~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~-~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~ 131 (873)
T KOG4194|consen 54 TRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLS-HIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLD 131 (873)
T ss_pred ceeeecCccccccccccccCCcCccceeeeeccccccc-cCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEe
Confidence 4678999999976544444443 35567999999999 666666667999999999999999 6788777788899999
Q ss_pred ccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChhhhhhhhhhhhh
Q 003855 93 LGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPVIGNFSASLQKF 172 (791)
Q Consensus 93 L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L 172 (791)
|.+|.|+++....++-++.|+.|+|+.|.|+.++... |..-.++++|+|++|.|+......|..+. +|.+|
T Consensus 132 L~~N~I~sv~se~L~~l~alrslDLSrN~is~i~~~s--------fp~~~ni~~L~La~N~It~l~~~~F~~ln-sL~tl 202 (873)
T KOG4194|consen 132 LRHNLISSVTSEELSALPALRSLDLSRNLISEIPKPS--------FPAKVNIKKLNLASNRITTLETGHFDSLN-SLLTL 202 (873)
T ss_pred eeccccccccHHHHHhHhhhhhhhhhhchhhcccCCC--------CCCCCCceEEeeccccccccccccccccc-hheee
Confidence 9999999999999999999999999999999988654 77888999999999999998888888886 89999
Q ss_pred hcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecCCccC
Q 003855 173 YAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLS 252 (791)
Q Consensus 173 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 252 (791)
.|++|+++...+..|.+|++|+.|+|..|+|.-...-.|.++++|+.|.|..|.|...-...|..+.++++|+|+.|+++
T Consensus 203 kLsrNrittLp~r~Fk~L~~L~~LdLnrN~irive~ltFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~ 282 (873)
T KOG4194|consen 203 KLSRNRITTLPQRSFKRLPKLESLDLNRNRIRIVEGLTFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ 282 (873)
T ss_pred ecccCcccccCHHHhhhcchhhhhhccccceeeehhhhhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhh
Confidence 99999999888889999999999999999998555778999999999999999999888899999999999999999999
Q ss_pred CCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchh
Q 003855 253 GHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIG 332 (791)
Q Consensus 253 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 332 (791)
..-..++-+++.|+.|+||+|.|..+.++++.-.++|++|+|++|+|+...+..|..+..|+.|+|++|.++..-...|.
T Consensus 283 ~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~ 362 (873)
T KOG4194|consen 283 AVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFV 362 (873)
T ss_pred hhhcccccccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHH
Confidence 88889999999999999999999999999999999999999999999999999999999999999999999977777899
Q ss_pred ccccccccccccccCCCCCC---cccCCCCCCcEEEccCCccCCCCchhhhhcccCceEEccCCCCcccCCCCCCCcCCc
Q 003855 333 ALKDLETLSLARNQFQGPIP---ESVGSLISLESLDLSGNNLSGKIPKSLETLSQLKQFNVSHNRLEGEIPVKGSFKNFS 409 (791)
Q Consensus 333 ~l~~L~~L~L~~N~l~~~~~---~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~ 409 (791)
++++|++|||++|.|+..+. ..|..|++|+.|+|.+|+|..+.-.+|.++++|+.|||.+|.+...-|.+..-..|+
T Consensus 363 ~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m~Lk 442 (873)
T KOG4194|consen 363 GLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLKSIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPMELK 442 (873)
T ss_pred HhhhhhhhcCcCCeEEEEEecchhhhccchhhhheeecCceeeecchhhhccCcccceecCCCCcceeecccccccchhh
Confidence 99999999999999986554 357789999999999999997777899999999999999999998887765545788
Q ss_pred cccccCCccccCCCCCC
Q 003855 410 VESFFGNYALCGPPKLR 426 (791)
Q Consensus 410 ~~~~~~n~~~c~~~~~~ 426 (791)
.+.+....++|+.+..+
T Consensus 443 ~Lv~nSssflCDCql~W 459 (873)
T KOG4194|consen 443 ELVMNSSSFLCDCQLKW 459 (873)
T ss_pred hhhhcccceEEeccHHH
Confidence 88888889999977543
No 17
>KOG0598 consensus Ribosomal protein S6 kinase and related proteins [General function prediction only; Signal transduction mechanisms]
Probab=100.00 E-value=3.8e-43 Score=347.70 Aligned_cols=244 Identities=27% Similarity=0.329 Sum_probs=202.8
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
..++|++.++||+|+||.||.++.+ +++.+|+|++++.. ....+...+|..++.+++||+||+++..|++++..|+
T Consensus 23 ~~~dF~~lkviGkG~fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysFQt~~kLyl 102 (357)
T KOG0598|consen 23 GPDDFEILKVIGKGSFGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSFQTEEKLYL 102 (357)
T ss_pred ChhheeeeeeeeccCCceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEecccCCeEEE
Confidence 3578999999999999999999864 78999999997664 3456778899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
|+||+.||.|..+|++++. +++..+.-++..|+.||.||| +++||||||||+|||+|++|+++|+|||+++..-.
T Consensus 103 Vld~~~GGeLf~hL~~eg~-F~E~~arfYlaEi~lAL~~LH----~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~ 177 (357)
T KOG0598|consen 103 VLDYLNGGELFYHLQREGR-FSEDRARFYLAEIVLALGYLH----SKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLK 177 (357)
T ss_pred EEeccCCccHHHHHHhcCC-cchhHHHHHHHHHHHHHHHHH----hCCeeeccCCHHHeeecCCCcEEEeccccchhccc
Confidence 9999999999999997765 788888889999999999999 78999999999999999999999999999986433
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
.. ......+||+.|||||++.+..|+..+|+||+||++|||++|.+||..... .+++....... +
T Consensus 178 ~~--~~t~tfcGT~eYmAPEil~~~gy~~~vDWWsLGillYeML~G~pPF~~~~~-----~~~~~~I~~~k--------~ 242 (357)
T KOG0598|consen 178 DG--DATRTFCGTPEYMAPEILLGKGYDKAVDWWSLGILLYEMLTGKPPFYAEDV-----KKMYDKILKGK--------L 242 (357)
T ss_pred CC--CccccccCCccccChHHHhcCCCCcccchHhHHHHHHHHhhCCCCCcCccH-----HHHHHHHhcCc--------C
Confidence 22 223346899999999999999999999999999999999999999976322 22222211111 0
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCC
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRIN 768 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt 768 (791)
...+...+.+..+++.+.++.||++|..
T Consensus 243 ------~~~p~~ls~~ardll~~LL~rdp~~RLg 270 (357)
T KOG0598|consen 243 ------PLPPGYLSEEARDLLKKLLKRDPRQRLG 270 (357)
T ss_pred ------CCCCccCCHHHHHHHHHHhccCHHHhcC
Confidence 0011123455679999999999999963
No 18
>KOG1095 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-43 Score=397.53 Aligned_cols=260 Identities=27% Similarity=0.450 Sum_probs=219.9
Q ss_pred hccccccccCCCcceEEEEEEec--CCc----EEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS--DGT----DVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 573 (791)
+.....+.||+|+||+||.|.+. +|. .||||.+.... .+...+|.+|..+|+.++|||||+++|+|.+....+
T Consensus 692 ~~v~l~~~lG~G~FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~l~~~~~~ 771 (1025)
T KOG1095|consen 692 KNVTLLRVLGKGAFGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVCLDSGPPL 771 (1025)
T ss_pred hheEeeeeeccccccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEeecCCCCcE
Confidence 44556788999999999999865 233 48999887654 556788999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhC------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeec
Q 003855 574 LVLEFMPNGSLEKWLYSH------NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFG 647 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 647 (791)
+++|||++|||..||++. ...+...+...++.|||+|+.||+ ++.+|||||.++|+|+++...|||+|||
T Consensus 772 i~leyM~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a~dvA~G~~YLe----~~~fvHRDLAaRNCLL~~~r~VKIaDFG 847 (1025)
T KOG1095|consen 772 ILLEYMEGGDLLSFLRESRPAPFQPSNLSMRDLLAFALDVAKGMNYLE----SKHFVHRDLAARNCLLDERRVVKIADFG 847 (1025)
T ss_pred EEehhcccCcHHHHHHhcccccCCCCCCCHHHHHHHHHHHhhhhHHHH----hCCCcCcchhhhheeecccCcEEEcccc
Confidence 999999999999999976 667899999999999999999999 7789999999999999999999999999
Q ss_pred cccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCCh
Q 003855 648 ISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGL 726 (791)
Q Consensus 648 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 726 (791)
+|+++...+.+.......-+..|||||.+.++.++.|+|||||||++||++| |..||......+.
T Consensus 848 lArDiy~~~yyr~~~~a~lPvkWm~PEsl~d~iFtskSDvWsFGVllWEifslG~~PY~~~~n~~v-------------- 913 (1025)
T KOG1095|consen 848 LARDIYDKDYYRKHGEAMLPVKWMPPESLKDGIFTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEV-------------- 913 (1025)
T ss_pred hhHhhhhchheeccCccccceecCCHHHHhhcccccccchhhhHHHHHHHHhCCCCCCCCcchHHH--------------
Confidence 9997666555443333234578999999999999999999999999999999 8899987433221
Q ss_pred hhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 727 TEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 727 ~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
+.. ..++.+.+.+..|+..++++|..||+.+|++||+|.++++.+..+....
T Consensus 914 ---~~~--~~~ggRL~~P~~CP~~ly~lM~~CW~~~pe~RP~F~~i~~q~~~i~~~~ 965 (1025)
T KOG1095|consen 914 ---LLD--VLEGGRLDPPSYCPEKLYQLMLQCWKHDPEDRPSFRTIVEQDPAISNAA 965 (1025)
T ss_pred ---HHH--HHhCCccCCCCCCChHHHHHHHHHccCChhhCccHHHHHhhhhhhhhhh
Confidence 110 1122355667789999999999999999999999999999888876544
No 19
>KOG3653 consensus Transforming growth factor beta/activin receptor subfamily of serine/threonine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.7e-42 Score=350.41 Aligned_cols=279 Identities=25% Similarity=0.369 Sum_probs=214.9
Q ss_pred hccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHh--ccCCccceeeeeeccCC----eeeE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRN--VRHRNLIKILSSCSNPD----FKAL 574 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~~~~~~----~~~l 574 (791)
+..+..+.||+|.||.||||++. ++.||||++... ..+.|..|.++++. ++|+||++++++-.... .+++
T Consensus 210 ~pl~l~eli~~Grfg~V~KaqL~-~~~VAVKifp~~---~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~ekr~t~~~~eywL 285 (534)
T KOG3653|consen 210 DPLQLLELIGRGRFGCVWKAQLD-NRLVAVKIFPEQ---EKQSFQNEKNIYSLPGMKHENILQFIGAEKRGTADRMEYWL 285 (534)
T ss_pred CchhhHHHhhcCccceeehhhcc-CceeEEEecCHH---HHHHHHhHHHHHhccCccchhHHHhhchhccCCccccceeE
Confidence 45566779999999999999994 599999999754 44677788888875 58999999999876555 7899
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHcc-----CCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHG-----HSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~-----~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
|+||.+.|+|.+||..+. ++|....+|+..+++||+|||+. +.+++|+|||||++||||.+|+++.|+|||+|
T Consensus 286 Vt~fh~kGsL~dyL~~nt--isw~~~cria~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLA 363 (534)
T KOG3653|consen 286 VTEFHPKGSLCDYLKANT--ISWNSLCRIAESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLA 363 (534)
T ss_pred EeeeccCCcHHHHHHhcc--ccHHHHHHHHHHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeecccee
Confidence 999999999999999876 89999999999999999999963 44678999999999999999999999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCCCCCC------ccccHHhHHHHHHHHHhCCCCCC--ccccCcchHHHHHHHh
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVS------AKCDVYSYGVLLMETFTRKRPTD--EMFTGEMSLRRWVKES 721 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~------~~~Dv~s~G~vl~elltg~~p~~--~~~~~~~~~~~~~~~~ 721 (791)
..+.++.........+||.+|||||++.+...- .+.||||+|.|+|||+++...++ ...+-...+..-+..+
T Consensus 364 l~~~p~~~~~d~~~qVGT~RYMAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SRC~~~~~~~vp~Yqlpfe~evG~h 443 (534)
T KOG3653|consen 364 LRLEPGKPQGDTHGQVGTRRYMAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASRCTDADPGPVPEYQLPFEAEVGNH 443 (534)
T ss_pred EEecCCCCCcchhhhhhhhhhcCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhhcccccCCCCCcccCchhHHhcCC
Confidence 998876655555558999999999988764422 26899999999999999775442 1112222333333322
Q ss_pred cCCC-hhh-hcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhcc
Q 003855 722 LPHG-LTE-VVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKFLD 785 (791)
Q Consensus 722 ~~~~-~~~-~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~~~ 785 (791)
..-+ +.+ ++.++.+......+........+.+.+..||++||+-|.|+.=|-+++.++...+.+
T Consensus 444 Pt~e~mq~~VV~kK~RP~~p~~W~~h~~~~~l~et~EeCWDhDaeARLTA~Cv~eR~~~l~~~~~~ 509 (534)
T KOG3653|consen 444 PTLEEMQELVVRKKQRPKIPDAWRKHAGMAVLCETIEECWDHDAEARLTAGCVEERMAELMMLWED 509 (534)
T ss_pred CCHHHHHHHHHhhccCCCChhhhhcCccHHHHHHHHHHHcCCchhhhhhhHHHHHHHHHHhccCCc
Confidence 2211 111 222222222222333334567788999999999999999999999999998776654
No 20
>KOG0600 consensus Cdc2-related protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=5.5e-43 Score=356.88 Aligned_cols=268 Identities=25% Similarity=0.295 Sum_probs=210.9
Q ss_pred hhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccC--CeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP--DFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 574 (791)
.+.|+.+++||+|+||.||+|+. .+|+.||+|.+..+. .+......+|+.+|++++||||+++.+...+. ...|+
T Consensus 116 ~~~feki~kIGeGTyg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~~~~~siYl 195 (560)
T KOG0600|consen 116 ADSFEKIEKIGEGTYGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTSKLSGSIYL 195 (560)
T ss_pred hHHHHHHHHhcCcchhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEecCCceEEE
Confidence 46788889999999999999985 589999999887654 44556678899999999999999999998766 78999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
|||||++ ||.-++......++..++..++.|++.||+||| +++|+|||||.+|||+|.+|.+||+|||+|+++..
T Consensus 196 VFeYMdh-DL~GLl~~p~vkft~~qIKc~mkQLl~Gl~~cH----~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~ 270 (560)
T KOG0600|consen 196 VFEYMDH-DLSGLLSSPGVKFTEPQIKCYMKQLLEGLEYCH----SRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTP 270 (560)
T ss_pred EEecccc-hhhhhhcCCCcccChHHHHHHHHHHHHHHHHHh----hcCeeeccccccceEEcCCCCEEeccccceeeccC
Confidence 9999988 999999988777999999999999999999999 78999999999999999999999999999998865
Q ss_pred CCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcC---CChh---
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP---HGLT--- 727 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~--- 727 (791)
... ...+..+.|.+|+|||.+.+ ..|+.++|+||.|||+.||++|++.|.+..+-+. +...++-.-. ..+.
T Consensus 271 ~~~-~~~T~rVvTLWYRpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQ-l~kIfklcGSP~e~~W~~~k 348 (560)
T KOG0600|consen 271 SGS-APYTSRVVTLWYRPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQ-LHKIFKLCGSPTEDYWPVSK 348 (560)
T ss_pred CCC-cccccceEEeeccChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHH-HHHHHHHhCCCChhcccccc
Confidence 443 34677789999999997655 6799999999999999999999999876433211 1111111110 0011
Q ss_pred ----hhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 728 ----EVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 728 ----~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+.+.-.....-.......+...++|+..+|..||++|.|+.++++
T Consensus 349 LP~~~~~kp~~~y~r~l~E~~~~~~~~~l~Ll~~lL~ldP~kR~tA~~aL~ 399 (560)
T KOG0600|consen 349 LPHATIFKPQQPYKRRLRETFKDFPASALDLLEKLLSLDPDKRGTASSALQ 399 (560)
T ss_pred CCcccccCCCCcccchHHHHhccCCHHHHHHHHHHhccCccccccHHHHhc
Confidence 01111000000001112345567789999999999999999999875
No 21
>KOG0659 consensus Cdk activating kinase (CAK)/RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH/TFIIK, kinase subunit CDK7 [Cell cycle control, cell division, chromosome partitioning; Transcription; Replication, recombination and repair]
Probab=100.00 E-value=1.8e-42 Score=325.30 Aligned_cols=264 Identities=26% Similarity=0.373 Sum_probs=209.3
Q ss_pred hccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
++|...+.+|+|.||+||+|+. ++|+.||||.++... ........+|++.++.++||||+.++++|...+...+|+|
T Consensus 2 ~rY~~~~~lGEG~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F~~~~~l~lVfE 81 (318)
T KOG0659|consen 2 DRYEKLEKLGEGTYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVFPHKSNLSLVFE 81 (318)
T ss_pred chhhhhhhhcCcceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhccCCCceEEEEE
Confidence 4678889999999999999985 589999999987543 2234567899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
||+. +|...++.....+...++..++.++.+|++||| .+.|+|||+||.|+|++++|.+||+|||+|+.+.....
T Consensus 82 fm~t-dLe~vIkd~~i~l~pa~iK~y~~m~LkGl~y~H----~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~ 156 (318)
T KOG0659|consen 82 FMPT-DLEVVIKDKNIILSPADIKSYMLMTLKGLAYCH----SKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNR 156 (318)
T ss_pred eccc-cHHHHhcccccccCHHHHHHHHHHHHHHHHHHH----hhhhhcccCCccceEEcCCCcEEeecccchhccCCCCc
Confidence 9976 999999988888999999999999999999999 77899999999999999999999999999999876554
Q ss_pred cceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHH--Hhc----CCCh---h
Q 003855 658 SVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVK--ESL----PHGL---T 727 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~--~~~----~~~~---~ 727 (791)
.... .+.|.+|+|||.+.+ ..|+..+||||.|||+.||+-|.+-|.+ +.++.+... ... ++.+ .
T Consensus 157 ~~~~--~V~TRWYRAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG----~sDidQL~~If~~LGTP~~~~WP~~~ 230 (318)
T KOG0659|consen 157 IQTH--QVVTRWYRAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPG----DSDIDQLSKIFRALGTPTPDQWPEMT 230 (318)
T ss_pred cccc--ceeeeeccChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCC----CchHHHHHHHHHHcCCCCcccCcccc
Confidence 4333 378999999998766 5699999999999999999998876554 333333321 111 1111 1
Q ss_pred hhcchhhhhhHHh---hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 728 EVVDANLVREEQA---FSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 728 ~~~d~~~~~~~~~---~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..-|......... ......++..+.+++..++..||.+|+++.|++++
T Consensus 231 ~lpdY~~~~~~P~~~~~~lf~aas~d~ldLl~~m~~ynP~~Rita~qaL~~ 281 (318)
T KOG0659|consen 231 SLPDYVKIQQFPKPPLNNLFPAASSDALDLLSKMLTYNPKKRITASQALKH 281 (318)
T ss_pred ccccHHHHhcCCCCccccccccccHHHHHHHHhhhccCchhcccHHHHhcc
Confidence 1111111110000 00112355677999999999999999999999875
No 22
>KOG0661 consensus MAPK related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-43 Score=354.77 Aligned_cols=266 Identities=24% Similarity=0.294 Sum_probs=209.5
Q ss_pred HHhhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhhhHHH-HHHHHHHHHHHhcc-CCccceeeeeeccCC-eee
Q 003855 498 RATDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQLERAF-RSFDSECEVLRNVR-HRNLIKILSSCSNPD-FKA 573 (791)
Q Consensus 498 ~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~-~~~~~e~~~l~~l~-h~niv~l~~~~~~~~-~~~ 573 (791)
...++|.+.++||.|+||.||+|+- .+|..||||.++....... ..=.+|+..++++. ||||+++.+.+.+.+ ..+
T Consensus 7 ~~m~RY~~i~klGDGTfGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d~~~~L~ 86 (538)
T KOG0661|consen 7 IFMDRYTVIRKLGDGTFGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRDNDRILY 86 (538)
T ss_pred hHHHHHHHHHHhcCCcceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhccCceEe
Confidence 3568899999999999999999985 4789999999876543321 23467999999998 999999999998887 999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
+|||||+. +|.+.++.+++.+++..+..|++||++||+|+| .+|+.|||+||+|||+.....+||+|||+||.+.
T Consensus 87 fVfE~Md~-NLYqLmK~R~r~fse~~irnim~QilqGL~hiH----k~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~ 161 (538)
T KOG0661|consen 87 FVFEFMDC-NLYQLMKDRNRLFSESDIRNIMYQILQGLAHIH----KHGFFHRDLKPENILISGNDVIKIADFGLAREVR 161 (538)
T ss_pred eeHHhhhh-hHHHHHhhcCCcCCHHHHHHHHHHHHHHHHHHH----hcCcccccCChhheEecccceeEecccccccccc
Confidence 99999965 999999998889999999999999999999999 7899999999999999999999999999999876
Q ss_pred CCCCcceeecccccccccCCCcc-CCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHH--hcCC----Ch
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYG-SEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKE--SLPH----GL 726 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~--~~~~----~~ 726 (791)
... ..+..+.|++|+|||++ +.+.|+.+.||||+|||++|+.+-++-|.+. ....+.++- .+.. .+
T Consensus 162 Skp---PYTeYVSTRWYRAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~----sE~Dqi~KIc~VLGtP~~~~~ 234 (538)
T KOG0661|consen 162 SKP---PYTEYVSTRWYRAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGA----SEIDQIYKICEVLGTPDKDSW 234 (538)
T ss_pred cCC---CcchhhhcccccchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCC----cHHHHHHHHHHHhCCCccccc
Confidence 544 34456789999999965 6788999999999999999999999887653 222222221 1111 01
Q ss_pred hh------hcchhhhhhHH-h-hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 727 TE------VVDANLVREEQ-A-FSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 727 ~~------~~d~~~~~~~~-~-~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.+ .+.-.+..-.. . ......++.+..+++.+|+.+||.+||||.|+++.
T Consensus 235 ~eg~~La~~mnf~~P~~~~~~l~~L~p~~s~~~~~li~~ll~WDP~kRpTA~~al~~ 291 (538)
T KOG0661|consen 235 PEGYNLASAMNFRFPQVKPSPLKDLLPNASSEAASLIERLLAWDPDKRPTASQALQH 291 (538)
T ss_pred hhHHHHHHHhccCCCcCCCCChHHhCcccCHHHHHHHHHHhcCCCccCccHHHHhcC
Confidence 10 00000000000 0 00112367888999999999999999999999874
No 23
>KOG0582 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=341.15 Aligned_cols=261 Identities=25% Similarity=0.322 Sum_probs=214.0
Q ss_pred hhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
.++|+..+.||.|..++||+|+. ..++.||||++..+. ....+.+.+|+..|+.++||||++.+..|..+...|+||.
T Consensus 25 ~~~YeL~e~IG~G~sa~V~~A~c~p~~e~VAIK~inLEkc~~~ld~l~kE~~~msl~~HPNIv~~~~sFvv~~~LWvVmp 104 (516)
T KOG0582|consen 25 AKDYELQEVIGVGASAVVYLARCIPTNEVVAIKIINLEKCNNDLDALRKEVQTMSLIDHPNIVTYHCSFVVDSELWVVMP 104 (516)
T ss_pred ccceeEEEEEeccceeEeeeeeecccCCEEEEEEeehhhhhhhHHHHHHHHHHhhhcCCCCcceEEEEEEecceeEEeeh
Confidence 36799999999999999999984 578999999998665 3446889999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 578 FMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 578 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||.+||+.+.+... ...+++..+..|.+++++||.||| .+|.+|||||+.|||++++|.|||+|||.+..+....
T Consensus 105 fMa~GS~ldIik~~~~~Gl~E~~Ia~iLre~LkaL~YLH----~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G 180 (516)
T KOG0582|consen 105 FMAGGSLLDIIKTYYPDGLEEASIATILREVLKALDYLH----QNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSG 180 (516)
T ss_pred hhcCCcHHHHHHHHccccccHHHHHHHHHHHHHHHHHHH----hcCceecccccccEEEcCCCcEEEcCceeeeeecccC
Confidence 99999999999853 344899999999999999999999 6899999999999999999999999999987765544
Q ss_pred Ccc-ee-ecccccccccCCCccCC--CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcch
Q 003855 657 DSV-TQ-TMTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 657 ~~~-~~-~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
... .. ...+||+.|||||++.. ..|+.|+|||||||+..|+.+|..||....+..+.+... +...+.-.....+.
T Consensus 181 ~R~~~rf~tfvgtp~wmAPEvl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tL-qn~pp~~~t~~~~~ 259 (516)
T KOG0582|consen 181 DRQVTRFNTFVGTPCWMAPEVLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTL-QNDPPTLLTSGLDK 259 (516)
T ss_pred ceeeEeeccccCcccccChHHhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHh-cCCCCCcccccCCh
Confidence 221 12 44589999999998543 569999999999999999999999998876655444332 22222111112221
Q ss_pred hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 733 NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+........+.+++..|+..||++|||++++++
T Consensus 260 ---------d~~k~~~ksf~e~i~~CL~kDP~kRptAskLlk 292 (516)
T KOG0582|consen 260 ---------DEDKKFSKSFREMIALCLVKDPSKRPTASKLLK 292 (516)
T ss_pred ---------HHhhhhcHHHHHHHHHHhhcCcccCCCHHHHhc
Confidence 122234567889999999999999999999875
No 24
>KOG0198 consensus MEKK and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=7.7e-42 Score=346.14 Aligned_cols=256 Identities=28% Similarity=0.391 Sum_probs=204.0
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCC--eeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPD--FKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--~~~lv~e 577 (791)
.+|...+.||+|+||.||.+... +|+..|||..........+.+.+|+.+|++++|||||+.+|...... ..++.||
T Consensus 17 ~~~~~~~~lG~Gs~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~~~~~~~~~i~mE 96 (313)
T KOG0198|consen 17 SNWSKGKLLGRGSFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSSSRENDEYNIFME 96 (313)
T ss_pred chhhhhccccCccceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccccccCeeeEeeee
Confidence 45778889999999999999975 58999999987664444677899999999999999999999855444 5889999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC-CCcEEEeeeccccccCC-C
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE-NMAAHVSDFGISKLLGE-G 655 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfgla~~~~~-~ 655 (791)
|+++|+|.+++...+..+++..+..+++||++||+||| +++||||||||+|||++. ++.+||+|||++..... .
T Consensus 97 y~~~GsL~~~~~~~g~~l~E~~v~~ytr~iL~GL~ylH----s~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~ 172 (313)
T KOG0198|consen 97 YAPGGSLSDLIKRYGGKLPEPLVRRYTRQILEGLAYLH----SKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKG 172 (313)
T ss_pred ccCCCcHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeccCcccceEEEeCCCCeEEeccCcccccccccc
Confidence 99999999999977656999999999999999999999 789999999999999999 79999999999987653 1
Q ss_pred CCcceeecccccccccCCCccCCCC-CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSEGI-VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
..........||+.|||||++..+. ...++||||+||++.||+||++||...... ..++-...... ..+
T Consensus 173 ~~~~~~~~~~Gtp~~maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~----~~~~~~ig~~~----~~P-- 242 (313)
T KOG0198|consen 173 TKSDSELSVQGTPNYMAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEE----AEALLLIGRED----SLP-- 242 (313)
T ss_pred ccccccccccCCccccCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcch----HHHHHHHhccC----CCC--
Confidence 1122233457999999999998543 445999999999999999999999864111 11111110000 000
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
.-+...+.+..+++.+|+..+|++||||.++++.--
T Consensus 243 -------~ip~~ls~~a~~Fl~~C~~~~p~~Rpta~eLL~hpf 278 (313)
T KOG0198|consen 243 -------EIPDSLSDEAKDFLRKCFKRDPEKRPTAEELLEHPF 278 (313)
T ss_pred -------CCCcccCHHHHHHHHHHhhcCcccCcCHHHHhhChh
Confidence 111235567789999999999999999999987643
No 25
>KOG0194 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-42 Score=365.04 Aligned_cols=261 Identities=27% Similarity=0.423 Sum_probs=214.5
Q ss_pred hhccccccccCCCcceEEEEEEecC--C---cEEEEEEeehh---hhHHHHHHHHHHHHHHhccCCccceeeeeeccCCe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISD--G---TDVAIKIFNLQ---LERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDF 571 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~--~---~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 571 (791)
.++....++||+|+||.||+|++.. + ..||||..+.+ .+.+..++.+|+++|++++|||||+++|++.....
T Consensus 156 H~~v~l~kkLGeGaFGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa~~~~P 235 (474)
T KOG0194|consen 156 HSDIELGKKLGEGAFGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVAVLEEP 235 (474)
T ss_pred ccCccccceeecccccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCc
Confidence 3455566899999999999998652 2 23899998753 36778899999999999999999999999999999
Q ss_pred eeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 572 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
.++|||+|.||+|.++|++.+..++..++..++.+.|.||+||| +++++||||.++|+|++.++.+||+|||+++.
T Consensus 236 l~ivmEl~~gGsL~~~L~k~~~~v~~~ek~~~~~~AA~Gl~YLh----~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~ 311 (474)
T KOG0194|consen 236 LMLVMELCNGGSLDDYLKKNKKSLPTLEKLRFCYDAARGLEYLH----SKNCIHRDIAARNCLYSKKGVVKISDFGLSRA 311 (474)
T ss_pred cEEEEEecCCCcHHHHHHhCCCCCCHHHHHHHHHHHHhHHHHHH----HCCCcchhHhHHHheecCCCeEEeCccccccC
Confidence 99999999999999999988777999999999999999999999 78899999999999999999999999999875
Q ss_pred cCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 652 LGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 652 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
-. ..........-+..|+|||.+..+.|++++|||||||++||+++ |..||.+.... ....++.
T Consensus 312 ~~--~~~~~~~~~klPirWLAPEtl~~~~~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~--~v~~kI~----------- 376 (474)
T KOG0194|consen 312 GS--QYVMKKFLKKLPIRWLAPETLNTGIFSFKTDVWSFGVLLWEIFENGAEPYPGMKNY--EVKAKIV----------- 376 (474)
T ss_pred Cc--ceeeccccccCcceecChhhhccCccccccchhheeeeEEeeeccCCCCCCCCCHH--HHHHHHH-----------
Confidence 42 11111112235689999999999999999999999999999999 88899875332 2233321
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhc
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKFL 784 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~~ 784 (791)
......+.+...+.++..++.+||..+|++||+|.++.+.++.+.....
T Consensus 377 -----~~~~r~~~~~~~p~~~~~~~~~c~~~~p~~R~tm~~i~~~l~~~~~~~~ 425 (474)
T KOG0194|consen 377 -----KNGYRMPIPSKTPKELAKVMKQCWKKDPEDRPTMSTIKKKLEALEKKKE 425 (474)
T ss_pred -----hcCccCCCCCCCHHHHHHHHHHhccCChhhccCHHHHHHHHHHHHhccc
Confidence 1111112222456778899999999999999999999999999877654
No 26
>KOG0592 consensus 3-phosphoinositide-dependent protein kinase (PDK1) [Signal transduction mechanisms]
Probab=100.00 E-value=9.1e-42 Score=350.84 Aligned_cols=254 Identities=24% Similarity=0.393 Sum_probs=210.8
Q ss_pred HHHhhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCe
Q 003855 497 QRATDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDF 571 (791)
Q Consensus 497 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 571 (791)
.....+|...+.||+|+|++|++|+. .+++.||||++.+.- +...+-+..|..+|.+| .||.|++++..|.|...
T Consensus 69 kk~~~DF~Fg~~lGeGSYStV~~A~~~~t~keYAiKVl~K~~Iike~KvkYV~~Ek~~l~~L~~hPgivkLy~TFQD~~s 148 (604)
T KOG0592|consen 69 KKTPNDFKFGKILGEGSYSTVVLAREKATGKEYAIKVLDKRYIIKEKKVKYVTREKEALTQLSGHPGIVKLYFTFQDEES 148 (604)
T ss_pred cCChhhcchhheeccccceeEEEeeecCCCceeeHhhhhHHHHHhhcccchhhHHHHHHHHhhCCCCeEEEEEEeecccc
Confidence 34557899999999999999999985 479999999987542 33345677899999999 89999999999999999
Q ss_pred eeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 572 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
.|+|+||+++|+|.++|++-+. +++.....++.+|+.||+||| +.|||||||||+|||+|+||+++|+|||.|+.
T Consensus 149 LYFvLe~A~nGdll~~i~K~Gs-fde~caR~YAAeIldAleylH----~~GIIHRDlKPENILLd~dmhikITDFGsAK~ 223 (604)
T KOG0592|consen 149 LYFVLEYAPNGDLLDLIKKYGS-FDETCARFYAAEILDALEYLH----SNGIIHRDLKPENILLDKDGHIKITDFGSAKI 223 (604)
T ss_pred eEEEEEecCCCcHHHHHHHhCc-chHHHHHHHHHHHHHHHHHHH----hcCceeccCChhheeEcCCCcEEEeecccccc
Confidence 9999999999999999998765 889999999999999999999 88999999999999999999999999999998
Q ss_pred cCCCCCc---------ce--eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHH
Q 003855 652 LGEGEDS---------VT--QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKE 720 (791)
Q Consensus 652 ~~~~~~~---------~~--~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~ 720 (791)
+.+.... .. ....+||..|.+||++.++..++.+|+|+||||+|.|+.|++||.+..+ -...+
T Consensus 224 l~~~~~~~~~~~~~~~a~s~~~SFVGTAeYVSPElL~~~~~~~~sDiWAlGCilyQmlaG~PPFra~Ne--yliFq---- 297 (604)
T KOG0592|consen 224 LSPSQKSQENPVDPNQASSRRSSFVGTAEYVSPELLNDSPAGPSSDLWALGCILYQMLAGQPPFRAANE--YLIFQ---- 297 (604)
T ss_pred CChhhccccCccCcccccCcccceeeeecccCHHHhcCCCCCcccchHHHHHHHHHHhcCCCCCccccH--HHHHH----
Confidence 8653222 11 1447899999999999999999999999999999999999999976321 11111
Q ss_pred hcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 721 SLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 721 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.+..-.. .-+...++.+.+|+.+.|..||.+|+|..||.+.
T Consensus 298 ------------kI~~l~y--~fp~~fp~~a~dLv~KLLv~dp~~Rlt~~qIk~H 338 (604)
T KOG0592|consen 298 ------------KIQALDY--EFPEGFPEDARDLIKKLLVRDPSDRLTSQQIKAH 338 (604)
T ss_pred ------------HHHHhcc--cCCCCCCHHHHHHHHHHHccCccccccHHHHhhC
Confidence 1111111 1122455778899999999999999999888763
No 27
>KOG2052 consensus Activin A type IB receptor, serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=9.8e-41 Score=335.09 Aligned_cols=280 Identities=25% Similarity=0.385 Sum_probs=222.4
Q ss_pred CCCCChhHHHHHhhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHh--ccCCccceeeee
Q 003855 488 WRRTPYLDIQRATDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRN--VRHRNLIKILSS 565 (791)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~--l~h~niv~l~~~ 565 (791)
....|+...+....+....+.||+|.||+||+|+| .|+.||||+|....+ +.+.+|.++++. ++|+||+.++++
T Consensus 198 GSGlplLVQRTiarqI~L~e~IGkGRyGEVwrG~w-rGe~VAVKiF~srdE---~SWfrEtEIYqTvmLRHENILgFIaa 273 (513)
T KOG2052|consen 198 GSGLPLLVQRTIARQIVLQEIIGKGRFGEVWRGRW-RGEDVAVKIFSSRDE---RSWFRETEIYQTVMLRHENILGFIAA 273 (513)
T ss_pred CCCchhHhHHhhhheeEEEEEecCccccceeeccc-cCCceEEEEecccch---hhhhhHHHHHHHHHhccchhhhhhhc
Confidence 34566777888889999999999999999999999 589999999975543 456667777776 499999999987
Q ss_pred eccC----CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHc----cCCCCCeEecCCCCCCeEeCC
Q 003855 566 CSNP----DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHH----GHSSAPIIHCDLKPTNILLDE 637 (791)
Q Consensus 566 ~~~~----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~----~~~~~~i~H~dlk~~Nill~~ 637 (791)
-..+ ...++|.+|.+.|||.|||.... ++.....+++..+|.||+|||. ...++.|+|||||+.||||..
T Consensus 274 D~~~~gs~TQLwLvTdYHe~GSL~DyL~r~t--v~~~~ml~LalS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKk 351 (513)
T KOG2052|consen 274 DNKDNGSWTQLWLVTDYHEHGSLYDYLNRNT--VTTEGMLKLALSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKK 351 (513)
T ss_pred cccCCCceEEEEEeeecccCCcHHHHHhhcc--CCHHHHHHHHHHHhhhHHHHHHHHhcCCCCchhhccccccccEEEcc
Confidence 6433 35789999999999999998744 8999999999999999999993 123667999999999999999
Q ss_pred CCcEEEeeeccccccCCCCC--cceeecccccccccCCCccCCCCCC------ccccHHhHHHHHHHHHhCC--------
Q 003855 638 NMAAHVSDFGISKLLGEGED--SVTQTMTMATIGYMAPEYGSEGIVS------AKCDVYSYGVLLMETFTRK-------- 701 (791)
Q Consensus 638 ~~~~kl~Dfgla~~~~~~~~--~~~~~~~~g~~~y~aPE~~~~~~~~------~~~Dv~s~G~vl~elltg~-------- 701 (791)
++.+.|+|+|+|........ .......+||.+|||||++...... ..+||||||.|+||+..+.
T Consensus 352 n~~C~IADLGLAv~h~~~t~~idi~~N~rVGTKRYMAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~ee 431 (513)
T KOG2052|consen 352 NGTCCIADLGLAVRHDSDTDTIDIPPNPRVGTKRYMAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEE 431 (513)
T ss_pred CCcEEEeeceeeEEecccCCcccCCCCCccceeeccChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehh
Confidence 99999999999987655422 2344557899999999987664321 2599999999999998743
Q ss_pred --CCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 702 --RPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 702 --~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
.||.+..+.+.++.+.. +-+..+.+.....+.+....+...+.++|+.||..+|+-|.|+-.+.++|.++
T Consensus 432 y~~Pyyd~Vp~DPs~eeMr--------kVVCv~~~RP~ipnrW~s~~~l~~m~klMkeCW~~Np~aRltALriKKtl~~l 503 (513)
T KOG2052|consen 432 YQLPYYDVVPSDPSFEEMR--------KVVCVQKLRPNIPNRWKSDPALRVMAKLMKECWYANPAARLTALRIKKTLAKL 503 (513)
T ss_pred hcCCcccCCCCCCCHHHHh--------cceeecccCCCCCcccccCHHHHHHHHHHHHhhcCCchhhhHHHHHHHHHHHH
Confidence 57776666555544421 22333333333334455556778899999999999999999999999999998
Q ss_pred HH
Q 003855 780 KV 781 (791)
Q Consensus 780 ~~ 781 (791)
..
T Consensus 504 ~~ 505 (513)
T KOG2052|consen 504 SN 505 (513)
T ss_pred hc
Confidence 64
No 28
>KOG0578 consensus p21-activated serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-41 Score=352.88 Aligned_cols=249 Identities=24% Similarity=0.367 Sum_probs=210.6
Q ss_pred hccccccccCCCcceEEEEEE-ecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGT-ISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
..|....+||+|+.|.||.|+ ..+++.||||++........+-+.+|+.+|+..+|+|||.+++.|...+..|+|||||
T Consensus 273 ~~y~~~~kigqgaSG~vy~A~~~~~~~~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sylv~deLWVVMEym 352 (550)
T KOG0578|consen 273 SKYTDFKKIGQGATGGVYVARKISTKQEVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSYLVGDELWVVMEYM 352 (550)
T ss_pred hhhcchhhhccccccceeeeeeccCCceEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHhcccceeEEEEeec
Confidence 457777899999999999997 4578999999998776666678899999999999999999999999899999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
+||+|.+.+.... +++.++..|++++++||+||| ..+|+|||||.+|||++.+|.+||+|||++..+.....
T Consensus 353 ~ggsLTDvVt~~~--~~E~qIA~Icre~l~aL~fLH----~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~-- 424 (550)
T KOG0578|consen 353 EGGSLTDVVTKTR--MTEGQIAAICREILQGLKFLH----ARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQS-- 424 (550)
T ss_pred CCCchhhhhhccc--ccHHHHHHHHHHHHHHHHHHH----hcceeeeccccceeEeccCCcEEEeeeeeeeccccccC--
Confidence 9999999987654 899999999999999999999 78999999999999999999999999999988765443
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
....-+||+.|||||+.....|++|+||||+|++++||+.|++||-. |..++..+.- ...+. +
T Consensus 425 KR~TmVGTPYWMAPEVvtrk~YG~KVDIWSLGIMaIEMveGEPPYln----E~PlrAlyLI-a~ng~-----P------- 487 (550)
T KOG0578|consen 425 KRSTMVGTPYWMAPEVVTRKPYGPKVDIWSLGIMAIEMVEGEPPYLN----ENPLRALYLI-ATNGT-----P------- 487 (550)
T ss_pred ccccccCCCCccchhhhhhcccCccccchhhhhHHHHHhcCCCCccC----CChHHHHHHH-hhcCC-----C-------
Confidence 34456899999999999999999999999999999999999999864 2222222110 00010 0
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
....+...+..+.+++.+||+.||++||+++|+++
T Consensus 488 ~lk~~~klS~~~kdFL~~cL~~dv~~RasA~eLL~ 522 (550)
T KOG0578|consen 488 KLKNPEKLSPELKDFLDRCLVVDVEQRASAKELLE 522 (550)
T ss_pred CcCCccccCHHHHHHHHHHhhcchhcCCCHHHHhc
Confidence 11122345677899999999999999999999986
No 29
>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V
Probab=100.00 E-value=4e-41 Score=361.52 Aligned_cols=261 Identities=26% Similarity=0.438 Sum_probs=206.4
Q ss_pred HhhccccccccCCCcceEEEEEEe------cCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccC-
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTI------SDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNP- 569 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~- 569 (791)
..++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.+++++ +||||+++++++...
T Consensus 5 ~~~~~~~~~~lG~G~fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~ 84 (338)
T cd05102 5 PRDRLRLGKVLGHGAFGKVVEASAFGIDKKSSCNTVAVKMLKEGATASEHKALMSELKILIHIGNHLNVVNLLGACTKPN 84 (338)
T ss_pred chhHceeeeEeccCCcceEEEEEEeccCCcccchhhheeccccccchHHHHHHHHHHHHHHHhccCcceeeEEeEecCCC
Confidence 346899999999999999999974 235689999986543 33456788999999999 899999999988764
Q ss_pred CeeeEEEecCCCCCHHHHHhhCC---------------------------------------------------------
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHN--------------------------------------------------------- 592 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~--------------------------------------------------------- 592 (791)
...++||||+++|+|.+++....
T Consensus 85 ~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (338)
T cd05102 85 GPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRFRAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETD 164 (338)
T ss_pred CceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhhhhhhhhhccccccccccCCccccccccccCcccccchhcc
Confidence 45789999999999999997431
Q ss_pred ----CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecccccc
Q 003855 593 ----YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATI 668 (791)
Q Consensus 593 ----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~ 668 (791)
..+++.++..++.||++||+||| +.+|+||||||+||++++++.+||+|||+++...............++.
T Consensus 165 ~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDiKp~Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~ 240 (338)
T cd05102 165 DLWKSPLTMEDLICYSFQVARGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPL 240 (338)
T ss_pred ccccCCCCHHHHHHHHHHHHHHHHHHH----HCCEECCCCccceEEEcCCCcEEEeecccccccccCcchhcccCCCCCc
Confidence 23678888999999999999999 6789999999999999999999999999998764433322233344678
Q ss_pred cccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHH
Q 003855 669 GYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDC 747 (791)
Q Consensus 669 ~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 747 (791)
.|+|||++.+..++.++|||||||++|||++ |..||......+ .+...+.. .. ....+..+
T Consensus 241 ~y~aPE~~~~~~~~~~sDiwslG~il~el~~~g~~pf~~~~~~~-~~~~~~~~----~~-------------~~~~~~~~ 302 (338)
T cd05102 241 KWMAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQINE-EFCQRLKD----GT-------------RMRAPENA 302 (338)
T ss_pred cccCcHHhhcCCCCcccCHHHHHHHHHHHHhCCCCCCCCCCccH-HHHHHHhc----CC-------------CCCCCCCC
Confidence 8999999988899999999999999999997 999987632221 11111110 00 00011234
Q ss_pred HHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 748 ILSIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 748 ~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
+..+.+++.+||+.||++|||+.|+++.|+++..
T Consensus 303 ~~~l~~li~~cl~~dp~~RPs~~el~~~l~~~~~ 336 (338)
T cd05102 303 TPEIYRIMLACWQGDPKERPTFSALVEILGDLLQ 336 (338)
T ss_pred CHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 5678899999999999999999999999998864
No 30
>KOG4721 consensus Serine/threonine protein kinase, contains leucine zipper domain [Signal transduction mechanisms]
Probab=100.00 E-value=9.7e-42 Score=349.81 Aligned_cols=254 Identities=26% Similarity=0.406 Sum_probs=209.4
Q ss_pred CCChhHHHHHhhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccC
Q 003855 490 RTPYLDIQRATDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNP 569 (791)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 569 (791)
..||+++. ..+-+|.|+.|.||.|+++ ++.||||+++. .-+.+++-|++++||||+.|.|+|...
T Consensus 120 eiPFe~Is-------ELeWlGSGaQGAVF~Grl~-netVAVKKV~e-------lkETdIKHLRkLkH~NII~FkGVCtqs 184 (904)
T KOG4721|consen 120 EIPFEEIS-------ELEWLGSGAQGAVFLGRLH-NETVAVKKVRE-------LKETDIKHLRKLKHPNIITFKGVCTQS 184 (904)
T ss_pred cCCHHHhh-------hhhhhccCcccceeeeecc-CceehhHHHhh-------hhhhhHHHHHhccCcceeeEeeeecCC
Confidence 45665543 3568999999999999994 68899997642 224578899999999999999999999
Q ss_pred CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
..++||||||..|-|...|+.... +.......+..+||.|+.||| .+.|||||||.-||||+.+..|||+|||.+
T Consensus 185 PcyCIiMEfCa~GqL~~VLka~~~-itp~llv~Wsk~IA~GM~YLH----~hKIIHRDLKSPNiLIs~~d~VKIsDFGTS 259 (904)
T KOG4721|consen 185 PCYCIIMEFCAQGQLYEVLKAGRP-ITPSLLVDWSKGIAGGMNYLH----LHKIIHRDLKSPNILISYDDVVKISDFGTS 259 (904)
T ss_pred ceeEEeeeccccccHHHHHhccCc-cCHHHHHHHHHHhhhhhHHHH----HhhHhhhccCCCceEeeccceEEeccccch
Confidence 999999999999999999987654 777788899999999999999 667999999999999999999999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhh
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEV 729 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (791)
+...+. .+.-..+||..|||||++.....++|+||||||||||||+||..||.+...... +-.
T Consensus 260 ~e~~~~---STkMSFaGTVaWMAPEvIrnePcsEKVDIwSfGVVLWEmLT~EiPYkdVdssAI-----IwG--------- 322 (904)
T KOG4721|consen 260 KELSDK---STKMSFAGTVAWMAPEVIRNEPCSEKVDIWSFGVVLWEMLTGEIPYKDVDSSAI-----IWG--------- 322 (904)
T ss_pred Hhhhhh---hhhhhhhhhHhhhCHHHhhcCCcccccceehhHHHHHHHHhcCCCccccchhee-----EEe---------
Confidence 877543 223346799999999999999999999999999999999999999976322110 000
Q ss_pred cchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhc
Q 003855 730 VDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKFL 784 (791)
Q Consensus 730 ~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~~ 784 (791)
+ -......+-+..|++.+.-|+++||+..|..||+|.+++..|.-.....+
T Consensus 323 V----GsNsL~LpvPstcP~GfklL~Kqcw~sKpRNRPSFrqil~HldIa~pell 373 (904)
T KOG4721|consen 323 V----GSNSLHLPVPSTCPDGFKLLLKQCWNSKPRNRPSFRQILLHLDIASPELL 373 (904)
T ss_pred c----cCCcccccCcccCchHHHHHHHHHHhcCCCCCccHHHHHHHHhhcCHHHh
Confidence 0 00111234566899999999999999999999999999999877655443
No 31
>KOG0597 consensus Serine-threonine protein kinase FUSED [General function prediction only]
Probab=100.00 E-value=6.7e-41 Score=344.05 Aligned_cols=246 Identities=29% Similarity=0.427 Sum_probs=209.2
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
++|.+.+.||+|.||+||||+.+ +.+.||+|.+.+.. ++..+.+.+|+++++.++||||+.++++|+...+.++|.|
T Consensus 2 e~yhv~e~iG~Gsfg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esfEt~~~~~vVte 81 (808)
T KOG0597|consen 2 EQYHVYEMIGEGSFGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESFETSAHLWVVTE 81 (808)
T ss_pred cchhHHHHhcCCccceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhhcccceEEEEeh
Confidence 67888999999999999999865 78899999987654 4556789999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|+.| +|..++...+. ++++.+..++.++..||.||| +.+|+|||+||+|||++..|.+|+||||+|+.+...
T Consensus 82 ~a~g-~L~~il~~d~~-lpEe~v~~~a~~LVsaL~yLh----s~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~-- 153 (808)
T KOG0597|consen 82 YAVG-DLFTILEQDGK-LPEEQVRAIAYDLVSALYYLH----SNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTN-- 153 (808)
T ss_pred hhhh-hHHHHHHhccC-CCHHHHHHHHHHHHHHHHHHH----hcCcccccCCcceeeecCCCceeechhhhhhhcccC--
Confidence 9976 99999987665 999999999999999999999 788999999999999999999999999999987553
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
....+...||+-|||||...++.|+..+|.||+|||+||+++|++||-. .++.+.++....+..
T Consensus 154 t~vltsikGtPlYmAPElv~e~pyd~~sDlWslGcilYE~~~G~PPF~a-----~si~~Lv~~I~~d~v----------- 217 (808)
T KOG0597|consen 154 TSVLTSIKGTPLYMAPELVEEQPYDHTSDLWSLGCILYELYVGQPPFYA-----RSITQLVKSILKDPV----------- 217 (808)
T ss_pred ceeeeeccCcccccCHHHHcCCCccchhhHHHHHHHHHHHhcCCCCchH-----HHHHHHHHHHhcCCC-----------
Confidence 2334456799999999999999999999999999999999999999854 123333333222211
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+...+..+..++...+..||..|.+..+++.
T Consensus 218 ----~~p~~~S~~f~nfl~gLL~kdP~~RltW~~Ll~ 250 (808)
T KOG0597|consen 218 ----KPPSTASSSFVNFLQGLLIKDPAQRLTWTDLLG 250 (808)
T ss_pred ----CCcccccHHHHHHHHHHhhcChhhcccHHHHhc
Confidence 111245567889999999999999999999864
No 32
>KOG0663 consensus Protein kinase PITSLRE and related kinases [General function prediction only]
Probab=100.00 E-value=7.3e-41 Score=323.94 Aligned_cols=266 Identities=24% Similarity=0.321 Sum_probs=205.7
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhH--HHHHHHHHHHHHHhccCCccceeeeeec--cCCeee
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLER--AFRSFDSECEVLRNVRHRNLIKILSSCS--NPDFKA 573 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~--~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~ 573 (791)
..++|+..+.|++|+||.||+|+.+ +++.||+|+++.+.+. ..-...+|+.++.+.+|||||.+-.+.. +-+..|
T Consensus 74 sv~efe~lnrI~EGtyGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVVvG~~~d~iy 153 (419)
T KOG0663|consen 74 SVEEFEKLNRIEEGTYGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVVVGSNMDKIY 153 (419)
T ss_pred cHHHHHHHhhcccCcceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEEeccccceee
Confidence 4578999999999999999999975 7899999999866532 2234578999999999999999988764 346799
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
+|||||+. ||...+..-+..+...++..++.|+++|++||| ...|+|||||++|+|+...|.+||+|||+||.++
T Consensus 154 ~VMe~~Eh-DLksl~d~m~q~F~~~evK~L~~QlL~glk~lH----~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~yg 228 (419)
T KOG0663|consen 154 IVMEYVEH-DLKSLMETMKQPFLPGEVKTLMLQLLRGLKHLH----DNWILHRDLKTSNLLLSHKGILKIADFGLAREYG 228 (419)
T ss_pred eeHHHHHh-hHHHHHHhccCCCchHHHHHHHHHHHHHHHHHh----hceeEecccchhheeeccCCcEEecccchhhhhc
Confidence 99999988 999999988777999999999999999999999 6789999999999999999999999999999987
Q ss_pred CCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc--C-C----C
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL--P-H----G 725 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~--~-~----~ 725 (791)
... ...+..+.|.+|+|||.+.+ ..|++..|+||+|||+.|++++++-|.+. ++.+..+-+-... + + +
T Consensus 229 sp~--k~~T~lVVTLWYRaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~--sE~dQl~~If~llGtPte~iwpg 304 (419)
T KOG0663|consen 229 SPL--KPYTPLVVTLWYRAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGK--SEIDQLDKIFKLLGTPSEAIWPG 304 (419)
T ss_pred CCc--ccCcceEEEeeecCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCC--chHHHHHHHHHHhCCCccccCCC
Confidence 653 34556678999999997765 56999999999999999999999888763 2222222221111 0 0 1
Q ss_pred hhhh--cc-hhhhhhH-----HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 726 LTEV--VD-ANLVREE-----QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 726 ~~~~--~d-~~~~~~~-----~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+. +. ..+.... ..+... .....-++++...+..||++|.|+.|.++
T Consensus 305 ~~~lp~~k~~~f~~~pyn~lr~kF~~~-~lse~g~~Lln~llt~dP~kR~tA~~~L~ 360 (419)
T KOG0663|consen 305 YSELPAVKKMTFSEHPYNNLRKKFGAL-SLSEQGFDLLNKLLTYDPGKRITAEDGLK 360 (419)
T ss_pred ccccchhhccccCCCCchhhhhhcccc-ccchhHHHHHHHHhccCccccccHHHhhc
Confidence 1100 00 0000000 011111 13356779999999999999999999875
No 33
>KOG0201 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.1e-41 Score=342.30 Aligned_cols=248 Identities=27% Similarity=0.372 Sum_probs=208.4
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
..|...+.||+|.||.||+|... +++.||+|++.... +...+++++|+.++.+++++||.+.+|.+..+...+++|||
T Consensus 13 ~~~~~~~~IgrGsfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsyl~g~~LwiiMey 92 (467)
T KOG0201|consen 13 LLYTKLELIGRGSFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSYLKGTKLWIIMEY 92 (467)
T ss_pred cccccchhccccccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhheeecccHHHHHHH
Confidence 34666789999999999999964 78999999997654 55678899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
|.||++.+.++.... +++..+.-|++++..|+.|+| ..+.+|||||+.||++..+|.||++|||.+..+.....
T Consensus 93 ~~gGsv~~lL~~~~~-~~E~~i~~ilre~l~~l~ylH----~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~- 166 (467)
T KOG0201|consen 93 CGGGSVLDLLKSGNI-LDEFEIAVILREVLKGLDYLH----SEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVK- 166 (467)
T ss_pred hcCcchhhhhccCCC-CccceeeeehHHHHHHhhhhh----hcceecccccccceeEeccCcEEEEecceeeeeechhh-
Confidence 999999999986543 478888889999999999999 67899999999999999999999999999987755432
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
.....+||+.|||||++....|+.|+||||+|++.+||++|.+|+....+.... . .+++.....+
T Consensus 167 -rr~tfvGTPfwMAPEVI~~~~Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl--f----lIpk~~PP~L-------- 231 (467)
T KOG0201|consen 167 -RRKTFVGTPFWMAPEVIKQSGYDTKADIWSLGITAIELAKGEPPHSKLHPMRVL--F----LIPKSAPPRL-------- 231 (467)
T ss_pred -ccccccccccccchhhhccccccchhhhhhhhHHHHHHhcCCCCCcccCcceEE--E----eccCCCCCcc--------
Confidence 225578999999999999889999999999999999999999999876553211 0 0111111111
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...+++.+.+++..|++.||++||+|+++++
T Consensus 232 -----~~~~S~~~kEFV~~CL~k~P~~RpsA~~LLK 262 (467)
T KOG0201|consen 232 -----DGDFSPPFKEFVEACLDKNPEFRPSAKELLK 262 (467)
T ss_pred -----ccccCHHHHHHHHHHhhcCcccCcCHHHHhh
Confidence 1146677889999999999999999999876
No 34
>KOG0605 consensus NDR and related serine/threonine kinases [General function prediction only]
Probab=100.00 E-value=2.4e-40 Score=340.99 Aligned_cols=251 Identities=24% Similarity=0.359 Sum_probs=205.2
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
..++|+.++.||+|+||.||.|+-+ +|..+|+|++++.. ..+.+.+..|-.+|...++|+||+++..|.+.+..||
T Consensus 139 ~~~DFe~Lk~IgkGAfGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsFQD~~~LYL 218 (550)
T KOG0605|consen 139 SLDDFELLKVIGKGAFGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSFQDKEYLYL 218 (550)
T ss_pred CcccchhheeeccccceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEecCCCeeEE
Confidence 4689999999999999999999854 79999999998764 5667888999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||++|||+..+|...+. +++.....++.+++-|++-+| ..|++||||||+|+|||..|++||+|||++.-+..
T Consensus 219 iMEylPGGD~mTLL~~~~~-L~e~~arfYiaE~vlAI~~iH----~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~ 293 (550)
T KOG0605|consen 219 IMEYLPGGDMMTLLMRKDT-LTEDWARFYIAETVLAIESIH----QLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDK 293 (550)
T ss_pred EEEecCCccHHHHHHhcCc-CchHHHHHHHHHHHHHHHHHH----HcCcccccCChhheeecCCCCEeeccccccchhhh
Confidence 9999999999999987665 888888899999999999999 78999999999999999999999999999953211
Q ss_pred ----------------------CCCc----ce-------------------eecccccccccCCCccCCCCCCccccHHh
Q 003855 655 ----------------------GEDS----VT-------------------QTMTMATIGYMAPEYGSEGIVSAKCDVYS 689 (791)
Q Consensus 655 ----------------------~~~~----~~-------------------~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s 689 (791)
.+.. .. ....+|||.|||||++.+..|+..+|+||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDYiAPEVll~kgY~~~cDwWS 373 (550)
T KOG0605|consen 294 KHRIESYRLDEQMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDYIAPEVLLGKGYGKECDWWS 373 (550)
T ss_pred hhhhhhhcchhhhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccccchHHHhcCCCCccccHHH
Confidence 0000 00 01247999999999999999999999999
Q ss_pred HHHHHHHHHhCCCCCCccccCcc--hHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCC
Q 003855 690 YGVLLMETFTRKRPTDEMFTGEM--SLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRI 767 (791)
Q Consensus 690 ~G~vl~elltg~~p~~~~~~~~~--~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP 767 (791)
+|||+|||+.|.+||....+.+. .+..|... -.++....+..+..++|.+|+. ||++|.
T Consensus 374 LG~ImyEmLvGyPPF~s~tp~~T~rkI~nwr~~------------------l~fP~~~~~s~eA~DLI~rll~-d~~~RL 434 (550)
T KOG0605|consen 374 LGCIMYEMLVGYPPFCSETPQETYRKIVNWRET------------------LKFPEEVDLSDEAKDLITRLLC-DPENRL 434 (550)
T ss_pred HHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhhh------------------ccCCCcCcccHHHHHHHHHHhc-CHHHhc
Confidence 99999999999999976433221 12222111 1122223445778899999999 999998
Q ss_pred C---HHHHH
Q 003855 768 N---VTDAA 773 (791)
Q Consensus 768 t---~~ev~ 773 (791)
. +.||.
T Consensus 435 G~~G~~EIK 443 (550)
T KOG0605|consen 435 GSKGAEEIK 443 (550)
T ss_pred CcccHHHHh
Confidence 6 55554
No 35
>KOG0616 consensus cAMP-dependent protein kinase catalytic subunit (PKA) [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-40 Score=315.57 Aligned_cols=237 Identities=27% Similarity=0.325 Sum_probs=199.0
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
.++|+..+.+|.|+||.|..++.+ +|..+|+|++++.. -++.+....|..+++.+.||+++++++.+.+.+..++|
T Consensus 43 l~dfe~~~tlGtGSFGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t~~d~~~lymv 122 (355)
T KOG0616|consen 43 LQDFERLKTLGTGSFGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGTFKDNSNLYMV 122 (355)
T ss_pred hhhhhheeeeccCccceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEeeccCCeEEEE
Confidence 467889999999999999999976 68899999998764 35567788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
|||++||.|.+++++.++ +++....-+|.+|+.|++||| +..|++||+||+|||+|.+|.+||+|||+|+.....
T Consensus 123 meyv~GGElFS~Lrk~~r-F~e~~arFYAAeivlAleylH----~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~r 197 (355)
T KOG0616|consen 123 MEYVPGGELFSYLRKSGR-FSEPHARFYAAEIVLALEYLH----SLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGR 197 (355)
T ss_pred EeccCCccHHHHHHhcCC-CCchhHHHHHHHHHHHHHHHH----hcCeeeccCChHHeeeccCCcEEEEeccceEEecCc
Confidence 999999999999998765 788889999999999999999 788999999999999999999999999999876432
Q ss_pred CCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
....+||+.|+|||++....|..++|+|||||++|||+.|.+||....+ ...+.+.+..
T Consensus 198 -----T~TlCGTPeYLAPEii~sk~ynkavDWWalGVLIYEMlaG~pPF~~~~~-~~iY~KI~~~--------------- 256 (355)
T KOG0616|consen 198 -----TWTLCGTPEYLAPEIIQSKGYNKAVDWWALGVLIYEMLAGYPPFYDDNP-IQIYEKILEG--------------- 256 (355)
T ss_pred -----EEEecCCccccChHHhhcCCCCcchhHHHHHHHHHHHHcCCCCCcCCCh-HHHHHHHHhC---------------
Confidence 3346899999999999999999999999999999999999999976432 1111111111
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCC
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMR 766 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R 766 (791)
...+ +...+..+.+++...++.|-.+|
T Consensus 257 --~v~f--P~~fs~~~kdLl~~LL~vD~t~R 283 (355)
T KOG0616|consen 257 --KVKF--PSYFSSDAKDLLKKLLQVDLTKR 283 (355)
T ss_pred --cccC--CcccCHHHHHHHHHHHhhhhHhh
Confidence 0011 11234566788888888888887
No 36
>KOG0583 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.4e-40 Score=347.85 Aligned_cols=256 Identities=27% Similarity=0.348 Sum_probs=207.7
Q ss_pred HHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehh----hh-HHHHHHHHHHHHHHhcc-CCccceeeeeeccCC
Q 003855 498 RATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ----LE-RAFRSFDSECEVLRNVR-HRNLIKILSSCSNPD 570 (791)
Q Consensus 498 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~----~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 570 (791)
.....|...+.||+|+||.|+.|... +++.||+|++... .. ...+.+.+|+.++++++ ||||+++++++..+.
T Consensus 14 ~~~g~y~~~~~lG~GsfgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~~t~~ 93 (370)
T KOG0583|consen 14 LSIGKYELGRTLGSGSFGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVFATPT 93 (370)
T ss_pred cccCceeeeeeecCCCCeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEEecCC
Confidence 34568999999999999999999854 7899999987654 12 23456678999999998 999999999999999
Q ss_pred eeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC-CcEEEeeeccc
Q 003855 571 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN-MAAHVSDFGIS 649 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfgla 649 (791)
..++||||+.||+|.+++.+ ...+.+.+..++++|++.|++||| +++|+||||||+||+++.+ +++||+|||++
T Consensus 94 ~~~ivmEy~~gGdL~~~i~~-~g~l~E~~ar~~F~Qlisav~y~H----~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s 168 (370)
T KOG0583|consen 94 KIYIVMEYCSGGDLFDYIVN-KGRLKEDEARKYFRQLISAVAYCH----SRGIVHRDLKPENILLDGNEGNLKLSDFGLS 168 (370)
T ss_pred eEEEEEEecCCccHHHHHHH-cCCCChHHHHHHHHHHHHHHHHHH----hCCEeeCCCCHHHEEecCCCCCEEEeccccc
Confidence 99999999999999999998 445888999999999999999999 7899999999999999999 99999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCCCC-CC-ccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChh
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSEGI-VS-AKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLT 727 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~-~~-~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (791)
.... .........+||+.|+|||++.+.. |+ .++||||+||++|.|++|+.||++... .........
T Consensus 169 ~~~~--~~~~~l~t~cGsp~Y~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~-----~~l~~ki~~---- 237 (370)
T KOG0583|consen 169 AISP--GEDGLLKTFCGSPAYAAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNV-----PNLYRKIRK---- 237 (370)
T ss_pred cccC--CCCCcccCCCCCcccCCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccH-----HHHHHHHhc----
Confidence 9873 1122334568999999999998877 75 789999999999999999999987211 111111000
Q ss_pred hhcchhhhhhHHhhHHHHHH-HHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 728 EVVDANLVREEQAFSAKMDC-ILSIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 728 ~~~d~~~~~~~~~~~~~~~~-~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
.. ..-+..+ +.++..++.+|+..+|.+|+++.+++ .-.-++.
T Consensus 238 ---------~~--~~~p~~~~S~~~~~Li~~mL~~~P~~R~t~~~i~-~h~w~~~ 280 (370)
T KOG0583|consen 238 ---------GE--FKIPSYLLSPEARSLIEKMLVPDPSTRITLLEIL-EHPWFQK 280 (370)
T ss_pred ---------CC--ccCCCCcCCHHHHHHHHHHcCCCcccCCCHHHHh-hChhhcc
Confidence 00 0111122 56678999999999999999999998 5444443
No 37
>PHA02988 hypothetical protein; Provisional
Probab=100.00 E-value=6.6e-40 Score=341.93 Aligned_cols=247 Identities=23% Similarity=0.300 Sum_probs=200.5
Q ss_pred cccCCCcceEEEEEEecCCcEEEEEEeehhhh---HHHHHHHHHHHHHHhccCCccceeeeeecc----CCeeeEEEecC
Q 003855 507 NLLGTGSFGSVYKGTISDGTDVAIKIFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSCSN----PDFKALVLEFM 579 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~~lv~e~~ 579 (791)
..||+|++|.||+|.+ +|+.||||++..... ...+.+.+|+.++++++||||++++|++.+ ....++||||+
T Consensus 26 ~~i~~g~~~~v~~~~~-~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~~~~~~~~~lv~Ey~ 104 (283)
T PHA02988 26 VLIKENDQNSIYKGIF-NNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDIVDDLPRLSLILEYC 104 (283)
T ss_pred eEEeeCCceEEEEEEE-CCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEecccCCCceEEEEEeC
Confidence 5799999999999998 689999999875432 235678899999999999999999999866 34678999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
++|+|.+++.+.. .+++....+++.+++.|+.|||. ..+++||||||+||++++++.+||+|||+++......
T Consensus 105 ~~g~L~~~l~~~~-~~~~~~~~~i~~~i~~~l~~lH~---~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~--- 177 (283)
T PHA02988 105 TRGYLREVLDKEK-DLSFKTKLDMAIDCCKGLYNLYK---YTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPP--- 177 (283)
T ss_pred CCCcHHHHHhhCC-CCChhHHHHHHHHHHHHHHHHHh---cCCCCCCcCChhhEEECCCCcEEEcccchHhhhcccc---
Confidence 9999999998654 48899999999999999999993 2368899999999999999999999999998654321
Q ss_pred eeecccccccccCCCccCC--CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 660 TQTMTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
....|+..|+|||++.+ ..++.++|||||||++|||++|+.||...... .+.........
T Consensus 178 --~~~~~~~~y~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~-----~~~~~i~~~~~----------- 239 (283)
T PHA02988 178 --FKNVNFMVYFSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTK-----EIYDLIINKNN----------- 239 (283)
T ss_pred --ccccCcccccCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHH-----HHHHHHHhcCC-----------
Confidence 22457889999999876 67999999999999999999999999763211 11111110000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
....+..++..+.+++.+||+.||++|||+.|+++.|+.+..
T Consensus 240 --~~~~~~~~~~~l~~li~~cl~~dp~~Rps~~ell~~l~~~~~ 281 (283)
T PHA02988 240 --SLKLPLDCPLEIKCIVEACTSHDSIKRPNIKEILYNLSLYKF 281 (283)
T ss_pred --CCCCCCcCcHHHHHHHHHHhcCCcccCcCHHHHHHHHHHHHh
Confidence 001112456778899999999999999999999999998854
No 38
>KOG4278 consensus Protein tyrosine kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.6e-40 Score=343.42 Aligned_cols=256 Identities=27% Similarity=0.401 Sum_probs=216.3
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.+..+.++||-|.||.||.|.|+ -.-.||||.++.+.. ..++|.+|+.+|+.++|||+|+++|+|..+...|||+|||
T Consensus 267 tdItMkhKLGGGQYGeVYeGvWKkyslTvAVKtLKEDtM-eveEFLkEAAvMKeikHpNLVqLLGVCT~EpPFYIiTEfM 345 (1157)
T KOG4278|consen 267 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCTHEPPFYIITEFM 345 (1157)
T ss_pred hheeeeeccCCCcccceeeeeeeccceeeehhhhhhcch-hHHHHHHHHHHHHhhcCccHHHHhhhhccCCCeEEEEecc
Confidence 35567789999999999999986 456799999876543 3578999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
..|+|.+||+... ..++..-.+.+|.||+.|++||. .+.+|||||.++|+||.++..||++|||+++.+..+. +
T Consensus 346 ~yGNLLdYLRecnr~ev~avvLlyMAtQIsSaMeYLE----kknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDT-Y 420 (1157)
T KOG4278|consen 346 CYGNLLDYLRECNRSEVPAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDT-Y 420 (1157)
T ss_pred cCccHHHHHHHhchhhcchhHHHHHHHHHHHHHHHHH----HhhhhhhhhhhhhccccccceEEeeccchhhhhcCCc-e
Confidence 9999999999543 34666778899999999999999 6789999999999999999999999999999986443 3
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
..+....-++.|.|||-+....++.|+|||+|||++||+.| |..||.+.. +.+. ..+.+.
T Consensus 421 TAHAGAKFPIKWTAPEsLAyNtFSiKSDVWAFGVLLWEIATYGMsPYPGid-----lSqV--------------Y~LLEk 481 (1157)
T KOG4278|consen 421 TAHAGAKFPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYPGID-----LSQV--------------YGLLEK 481 (1157)
T ss_pred ecccCccCcccccCcccccccccccchhhHHHHHHHHHHHhcCCCCCCCcc-----HHHH--------------HHHHhc
Confidence 33333344678999999999999999999999999999999 788987632 2221 123444
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
+.+...++.|+++++++|+.||+++|++||+|.|+-+.++.+-.
T Consensus 482 gyRM~~PeGCPpkVYeLMraCW~WsPsDRPsFaeiHqafEtmf~ 525 (1157)
T KOG4278|consen 482 GYRMDGPEGCPPKVYELMRACWNWSPSDRPSFAEIHQAFETMFS 525 (1157)
T ss_pred cccccCCCCCCHHHHHHHHHHhcCCcccCccHHHHHHHHHHHhc
Confidence 45566777999999999999999999999999999999988743
No 39
>KOG1094 consensus Discoidin domain receptor DDR1 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-40 Score=341.33 Aligned_cols=263 Identities=25% Similarity=0.395 Sum_probs=219.0
Q ss_pred hccccccccCCCcceEEEEEEecCCcEEEEEEeehhhh-HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLE-RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
+...+.++||+|.||+|..+....+..||||+++.... ....+|.+|+++|.+++||||++++|+|..++..++|+|||
T Consensus 538 s~L~~~ekiGeGqFGEVhLCeveg~lkVAVK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC~~DePicmI~EYm 617 (807)
T KOG1094|consen 538 SRLRFKEKIGEGQFGEVHLCEVEGPLKVAVKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVCVQDDPLCMITEYM 617 (807)
T ss_pred hheehhhhhcCcccceeEEEEecCceEEEEeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeeeecCCchHHHHHHH
Confidence 44567889999999999999998889999999987764 34588999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++|+|.+|+.++..+ .....-.+|+.|||.|++||. +.++||||+.++|+|+|.++++||+|||++|.+..++.+
T Consensus 618 EnGDLnqFl~aheapt~~t~~~vsi~tqiasgmaYLe----s~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy 693 (807)
T KOG1094|consen 618 ENGDLNQFLSAHELPTAETAPGVSICTQIASGMAYLE----SLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYY 693 (807)
T ss_pred hcCcHHHHHHhccCcccccchhHHHHHHHHHHHHHHH----hhchhhccccccceeecCcccEEecCcccccccccCCce
Confidence 999999999987443 355667789999999999999 788999999999999999999999999999988888877
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh--CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT--RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt--g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
......+-+.+|||||.+.-+++|.++|||+||+++||+++ ...||....+.. ..+-.....+..-
T Consensus 694 ~vqgr~vlpiRwmawEsillgkFttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~--vven~~~~~~~~~---------- 761 (807)
T KOG1094|consen 694 RVQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQ--VVENAGEFFRDQG---------- 761 (807)
T ss_pred eeecceeeeeeehhHHHHHhccccchhhhhhhHHHHHHHHHHHhhCchhhhhHHH--HHHhhhhhcCCCC----------
Confidence 77777778899999999999999999999999999999886 778987643221 1111111111110
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
.....+.+.-|+.+++++|.+||+.+-++||+|+++...|.+.
T Consensus 762 ~~~~l~~P~~cp~~lyelml~Cw~~es~~RPsFe~lh~~lq~~ 804 (807)
T KOG1094|consen 762 RQVVLSRPPACPQGLYELMLRCWRRESEQRPSFEQLHLFLQED 804 (807)
T ss_pred cceeccCCCcCcHHHHHHHHHHhchhhhcCCCHHHHHHHHHHh
Confidence 0011233456889999999999999999999999998887653
No 40
>KOG4257 consensus Focal adhesion tyrosine kinase FAK, contains FERM domain [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-40 Score=342.98 Aligned_cols=258 Identities=24% Similarity=0.408 Sum_probs=219.1
Q ss_pred hccccccccCCCcceEEEEEEec---CC--cEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS---DG--TDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~---~~--~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
+.....+.||.|.||.||+|.+. .| -.||||..+.+. .+..+.|.+|..+|++++||||++++|.|.+ ...++
T Consensus 389 e~Itl~r~iG~GqFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~~e-~P~Wi 467 (974)
T KOG4257|consen 389 ELITLKRLIGEGQFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVCVE-QPMWI 467 (974)
T ss_pred hhccHHHhhcCCcccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeeeec-cceeE
Confidence 44455678999999999999863 23 358899887643 4457789999999999999999999999975 45789
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
|||.++.|.|..|++.++..++......++.||+.||+||| +.+.|||||.++||||.+...||++|||++|.+..
T Consensus 468 vmEL~~~GELr~yLq~nk~sL~l~tL~ly~~Qi~talaYLe----SkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed 543 (974)
T KOG4257|consen 468 VMELAPLGELREYLQQNKDSLPLRTLTLYCYQICTALAYLE----SKRFVHRDIAARNILVSSPQCVKLADFGLSRYLED 543 (974)
T ss_pred EEecccchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHH----hhchhhhhhhhhheeecCcceeeecccchhhhccc
Confidence 99999999999999998888999999999999999999999 78899999999999999999999999999999876
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
...+... ...-++.|||||.+....++.++|||-|||.+||++. |..||.+....+. +-
T Consensus 544 ~~yYkaS-~~kLPIKWmaPESINfRrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDV-----------------I~-- 603 (974)
T KOG4257|consen 544 DAYYKAS-RGKLPIKWMAPESINFRRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDV-----------------IG-- 603 (974)
T ss_pred cchhhcc-ccccceeecCccccchhcccchhhHHHHHHHHHHHHHhcCCccccccccce-----------------EE--
Confidence 6554433 3445788999999999999999999999999999997 9999987543321 11
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
..+.+.+.+.+..||+.++.++.+||..+|.+||++.|++..|..+....
T Consensus 604 ~iEnGeRlP~P~nCPp~LYslmskcWayeP~kRPrftei~~~lsdv~qee 653 (974)
T KOG4257|consen 604 HIENGERLPCPPNCPPALYSLMSKCWAYEPSKRPRFTEIKAILSDVLQEE 653 (974)
T ss_pred EecCCCCCCCCCCCChHHHHHHHHHhccCcccCCcHHHHHHHHHHHHHHh
Confidence 12233456777789999999999999999999999999999999887643
No 41
>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k
Probab=100.00 E-value=2.2e-39 Score=342.59 Aligned_cols=261 Identities=26% Similarity=0.398 Sum_probs=203.2
Q ss_pred hccccccccCCCcceEEEEEEecC-----------------CcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCcccee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISD-----------------GTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKI 562 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l 562 (791)
++|+..+.||+|+||.||+|.+++ +..||+|++.... ......+.+|+.++++++||||+++
T Consensus 5 ~~~~~~~~lg~G~fg~V~~~~~~~~~~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~ 84 (304)
T cd05096 5 GHLLFKEKLGEGQFGEVHLCEVVNPQDLPTLQFPFNVRKGRPLLVAVKILRPDANKNARNDFLKEVKILSRLKDPNIIRL 84 (304)
T ss_pred hhCeeeeEecccCCeEEEEEEeccCcccccccccccccCCcceEEEEEEecCCCCHHHHHHHHHHHHHHhhcCCCCeeEE
Confidence 578889999999999999997532 3469999987543 3345678999999999999999999
Q ss_pred eeeeccCCeeeEEEecCCCCCHHHHHhhCC------------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeE
Q 003855 563 LSSCSNPDFKALVLEFMPNGSLEKWLYSHN------------------YFLDILERLNIMIDVGSALEYLHHGHSSAPII 624 (791)
Q Consensus 563 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~ 624 (791)
++++.+.+..++||||+++|+|.+++.... ..+++..+.+++.||+.||+||| +.+|+
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~iv 160 (304)
T cd05096 85 LGVCVDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCLPAISYSSLLHVALQIASGMKYLS----SLNFV 160 (304)
T ss_pred EEEEecCCceEEEEecCCCCcHHHHHHhccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHH----HCCcc
Confidence 999999899999999999999999986431 23678889999999999999999 67899
Q ss_pred ecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh--CCC
Q 003855 625 HCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT--RKR 702 (791)
Q Consensus 625 H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt--g~~ 702 (791)
||||||+||++++++.+||+|||+++...............++..|+|||+...+.++.++||||||+++|||++ +..
T Consensus 161 H~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~ 240 (304)
T cd05096 161 HRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRWMAWECILMGKFTTASDVWAFGVTLWEILMLCKEQ 240 (304)
T ss_pred ccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccccCHHHHhcCCCCchhhhHHHHHHHHHHHHccCCC
Confidence 999999999999999999999999987654433222333456788999999888889999999999999999997 456
Q ss_pred CCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 703 PTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 703 p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
||...... .....+........... ....+..++..+.+++.+||+.||++|||+.||.+.|+
T Consensus 241 p~~~~~~~--~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~li~~cl~~~p~~RPs~~~i~~~l~ 303 (304)
T cd05096 241 PYGELTDE--QVIENAGEFFRDQGRQV----------YLFRPPPCPQGLYELMLQCWSRDCRERPSFSDIHAFLT 303 (304)
T ss_pred CCCcCCHH--HHHHHHHHHhhhccccc----------cccCCCCCCHHHHHHHHHHccCCchhCcCHHHHHHHHh
Confidence 76643211 11111111111000000 00011235677899999999999999999999998876
No 42
>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit. Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce
Probab=100.00 E-value=1.4e-39 Score=352.93 Aligned_cols=258 Identities=24% Similarity=0.363 Sum_probs=205.3
Q ss_pred hhccccccccCCCcceEEEEEEe------cCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTI------SDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDF 571 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 571 (791)
.++|+..+.||+|+||.||+|++ .++..||||+++... ....+.+.+|+.+++.+ +||||++++++|.+.+.
T Consensus 34 ~~~~~~~~~LG~G~fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~~~~~~ 113 (375)
T cd05104 34 RNRLSFGKTLGAGAFGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGACTVGGP 113 (375)
T ss_pred hHHeehhheecCCccceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeeeccCCc
Confidence 35788999999999999999973 246689999986443 33446788999999999 89999999999999999
Q ss_pred eeEEEecCCCCCHHHHHhhCC-----------------------------------------------------------
Q 003855 572 KALVLEFMPNGSLEKWLYSHN----------------------------------------------------------- 592 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 592 (791)
.++||||+++|+|.++++...
T Consensus 114 ~~lv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (375)
T cd05104 114 TLVITEYCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGS 193 (375)
T ss_pred ceeeehhccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccce
Confidence 999999999999999997432
Q ss_pred ---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 593 ---------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 593 ---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
..+++..+.+++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 194 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~ 269 (375)
T cd05104 194 YIDQDVTSEILEEDELALDTEDLLSFSYQVAKGMSFLA----SKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSN 269 (375)
T ss_pred ecccccHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCchhhEEEECCCcEEEecCccceeccCccc
Confidence 14688899999999999999999 67899999999999999999999999999987654332
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
........++..|+|||.+.+..++.++|||||||++|||++ |..||...... ....+++......
T Consensus 270 ~~~~~~~~~~~~y~aPE~~~~~~~~~~sDi~slG~~l~ellt~g~~p~~~~~~~-~~~~~~~~~~~~~------------ 336 (375)
T cd05104 270 YVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSSPYPGMPVD-SKFYKMIKEGYRM------------ 336 (375)
T ss_pred ccccCCCCCCcceeChhHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCCCCCCch-HHHHHHHHhCccC------------
Confidence 222222345678999999999999999999999999999998 88888653221 1222222211100
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+...+.++.+++.+||+.||++||++.|+++.|++.
T Consensus 337 -----~~~~~~~~~l~~li~~cl~~dP~~RPs~~eil~~l~~~ 374 (375)
T cd05104 337 -----LSPECAPSEMYDIMKSCWDADPLKRPTFKQIVQLIEQQ 374 (375)
T ss_pred -----CCCCCCCHHHHHHHHHHccCChhHCcCHHHHHHHHHhh
Confidence 00112345688999999999999999999999999863
No 43
>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti
Probab=100.00 E-value=1.5e-39 Score=352.35 Aligned_cols=259 Identities=24% Similarity=0.393 Sum_probs=205.7
Q ss_pred hhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDF 571 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 571 (791)
.++|++.+.||+|+||.||+|+.. ++..||||++.... ....+.+.+|+.+++.+ +||||++++++|...+.
T Consensus 37 ~~~~~~~~~LG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~~h~nIv~~~~~~~~~~~ 116 (374)
T cd05106 37 RDNLQFGKTLGAGAFGKVVEATAFGLGKEDNVLRVAVKMLKASAHTDEREALMSELKILSHLGQHKNIVNLLGACTHGGP 116 (374)
T ss_pred HHHceehheecCCCcccEEEEEEecCCcccccceeEEEeccCCCCHHHHHHHHHHHHHHHhhccCCceeeEeeEecCCCC
Confidence 457999999999999999998742 34579999987543 33456788999999999 89999999999999999
Q ss_pred eeEEEecCCCCCHHHHHhhCC-----------------------------------------------------------
Q 003855 572 KALVLEFMPNGSLEKWLYSHN----------------------------------------------------------- 592 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 592 (791)
.++||||+++|+|.++++...
T Consensus 117 ~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (374)
T cd05106 117 VLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISETSSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSD 196 (374)
T ss_pred eEEeHhhccCCcHHHHHHhhhhhhccccccccccccccccccccchhcccccccccccccccccccccCCcccccccccc
Confidence 999999999999999986421
Q ss_pred ----------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceee
Q 003855 593 ----------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQT 662 (791)
Q Consensus 593 ----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 662 (791)
..+++.++.+++.||+.||+||| +.+|+||||||+||++++++.+||+|||+++.+..........
T Consensus 197 ~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~yLH----~~giiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~ 272 (374)
T cd05106 197 SKDEEDTEDSWPLDLDDLLRFSSQVAQGMDFLA----SKNCIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKG 272 (374)
T ss_pred ccchhccCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCEEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeecc
Confidence 23678889999999999999999 6799999999999999999999999999998764432222222
Q ss_pred cccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 663 MTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 663 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
...++..|+|||++.+..++.++|||||||++|||++ |+.||....... .....+......
T Consensus 273 ~~~~~~~y~aPE~~~~~~~~~~~DvwSlGvil~ellt~G~~Pf~~~~~~~-~~~~~~~~~~~~----------------- 334 (374)
T cd05106 273 NARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGKSPYPGILVNS-KFYKMVKRGYQM----------------- 334 (374)
T ss_pred CCCCccceeCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCccccccH-HHHHHHHcccCc-----------------
Confidence 2335678999999988899999999999999999997 999987643221 111111110000
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
..+...+.++.+++.+||+.||++||++.++++.|+++.
T Consensus 335 ~~~~~~~~~l~~li~~cl~~dp~~RPs~~~l~~~l~~~~ 373 (374)
T cd05106 335 SRPDFAPPEIYSIMKMCWNLEPTERPTFSQISQLIQRQL 373 (374)
T ss_pred cCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHh
Confidence 001123466889999999999999999999999999863
No 44
>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor
Probab=100.00 E-value=4.2e-39 Score=333.48 Aligned_cols=256 Identities=22% Similarity=0.361 Sum_probs=206.6
Q ss_pred hhccccccccCCCcceEEEEEEec----CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS----DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
.++|++.+.||+|+||.||+|.++ .+..||+|+++... ....+.+.+|+.++++++||||+++++++..++..++
T Consensus 4 ~~~~~~~~~ig~G~fg~V~~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~l 83 (266)
T cd05064 4 NKSIKIERILGTGRFGELCRGCLKLPSKRELPVAIHTLRAGCSDKQRRGFLAEALTLGQFDHSNIVRLEGVITRGNTMMI 83 (266)
T ss_pred hHHeEEeeeecccCCCeEEEEEEecCCCceeeEEEEecCCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEecCCCcEE
Confidence 357889999999999999999853 46689999987653 3345678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||+++|+|.+++......+++.++..++.|++.||+||| +.+++||||||+||+++.++.++++|||.+.....
T Consensus 84 v~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~i~~al~~lH----~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~ 159 (266)
T cd05064 84 VTEYMSNGALDSFLRKHEGQLVAGQLMGMLPGLASGMKYLS----EMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKS 159 (266)
T ss_pred EEEeCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeeccccHhhEEEcCCCcEEECCCcccccccc
Confidence 99999999999999876666899999999999999999999 67899999999999999999999999998765422
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
... .......++..|+|||+..+..++.++|||||||++||+++ |+.||...... ...+.+.. ..
T Consensus 160 ~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~----~~------- 225 (266)
T cd05064 160 EAI-YTTMSGKSPVLWAAPEAIQYHHFSSASDVWSFGIVMWEVMSYGERPYWDMSGQ--DVIKAVED----GF------- 225 (266)
T ss_pred cch-hcccCCCCceeecCHHHHhhCCccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHC----CC-------
Confidence 111 11112235678999999988999999999999999999875 99999753221 11111110 00
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+.+..++..+.+++.+||+.+|++||++.|+.+.|+++
T Consensus 226 ------~~~~~~~~~~~~~~li~~c~~~~p~~RP~~~~i~~~l~~~ 265 (266)
T cd05064 226 ------RLPAPRNCPNLLHQLMLDCWQKERGERPRFSQIHSILSKM 265 (266)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCCchhCCCHHHHHHHHHhh
Confidence 0111234567788999999999999999999999998764
No 45
>KOG0694 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1e-39 Score=345.64 Aligned_cols=244 Identities=23% Similarity=0.293 Sum_probs=203.2
Q ss_pred HHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCee
Q 003855 498 RATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFK 572 (791)
Q Consensus 498 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 572 (791)
...++|...++||+|.||.|+.+..+ +++.+|||++++.. .+..+....|.+++... +||+++.++.+|..+++.
T Consensus 365 ~~l~~F~~l~vLGkGsFGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~fQT~~~l 444 (694)
T KOG0694|consen 365 LTLDDFRLLAVLGRGSFGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCFQTKEHL 444 (694)
T ss_pred ccccceEEEEEeccCcCceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeecccccccCCeE
Confidence 34578999999999999999999976 78899999998764 55677888899998887 599999999999999999
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++||||+.||++..+ .+...+++..+.-++..|+.||.||| .++|||||||.+|||+|.+|.+||+|||+++.-
T Consensus 445 ~fvmey~~Ggdm~~~--~~~~~F~e~rarfyaAev~l~L~fLH----~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~ 518 (694)
T KOG0694|consen 445 FFVMEYVAGGDLMHH--IHTDVFSEPRARFYAAEVVLGLQFLH----ENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEG 518 (694)
T ss_pred EEEEEecCCCcEEEE--EecccccHHHHHHHHHHHHHHHHHHH----hcCceeeecchhheEEcccCcEEeccccccccc
Confidence 999999999994333 33344899999999999999999999 789999999999999999999999999999863
Q ss_pred CCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcch
Q 003855 653 GEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 653 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
-- .....+..+||+.|||||++.+..|+.++|+|||||+||||+.|..||.+. .|..+ +|.
T Consensus 519 m~--~g~~TsTfCGTpey~aPEil~e~~Yt~aVDWW~lGVLlyeML~Gq~PF~gd--dEee~---------------Fds 579 (694)
T KOG0694|consen 519 MG--QGDRTSTFCGTPEFLAPEVLTEQSYTRAVDWWGLGVLLYEMLVGESPFPGD--DEEEV---------------FDS 579 (694)
T ss_pred CC--CCCccccccCChhhcChhhhccCcccchhhHHHHHHHHHHHHcCCCCCCCC--CHHHH---------------HHH
Confidence 21 122445578999999999999999999999999999999999999999863 22222 222
Q ss_pred hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCH
Q 003855 733 NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINV 769 (791)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~ 769 (791)
-+..+. ..+..++.+..+++.+++..+|++|..+
T Consensus 580 I~~d~~---~yP~~ls~ea~~il~~ll~k~p~kRLG~ 613 (694)
T KOG0694|consen 580 IVNDEV---RYPRFLSKEAIAIMRRLLRKNPEKRLGS 613 (694)
T ss_pred HhcCCC---CCCCcccHHHHHHHHHHhccCcccccCC
Confidence 222111 1233566788899999999999999977
No 46
>KOG0660 consensus Mitogen-activated protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.4e-39 Score=317.43 Aligned_cols=268 Identities=25% Similarity=0.279 Sum_probs=205.0
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehh--hhHHHHHHHHHHHHHHhccCCccceeeeeecc-----CC
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSCSN-----PD 570 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-----~~ 570 (791)
....|...+.||+|+||.|+.|..+ +|+.||||.+... ..-..+...+|+.+++.++|+||+.+.+.+.. -.
T Consensus 20 i~~~y~~~~~iG~GAyGvVcsA~~~~t~~~VAIKKi~~~F~~~~~akRtlRElklLr~~~HeNIi~l~di~~p~~~~~f~ 99 (359)
T KOG0660|consen 20 IPRYYVLIEPIGRGAYGVVCSAKDKRTGEKVAIKKILNPFENQIDAKRTLRELKLLRHLRHENIIGLLDIFRPPSRDKFN 99 (359)
T ss_pred ccceecccccccCcceeeEEEEEEcCCCCEeehhhhhhhhhchHHHHHHHHHHHHHHHhcCCCcceEEeecccccccccc
Confidence 3455666789999999999999865 7899999988733 23345667889999999999999999998854 46
Q ss_pred eeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccc
Q 003855 571 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISK 650 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 650 (791)
..|+|+|+| ..+|.+.++++.. ++......+++|+++||.|+| +.+|+|||+||+|++++.+...||+|||+|+
T Consensus 100 DvYiV~elM-etDL~~iik~~~~-L~d~H~q~f~YQiLrgLKyiH----SAnViHRDLKPsNll~n~~c~lKI~DFGLAR 173 (359)
T KOG0660|consen 100 DVYLVFELM-ETDLHQIIKSQQD-LTDDHAQYFLYQILRGLKYIH----SANVIHRDLKPSNLLLNADCDLKICDFGLAR 173 (359)
T ss_pred eeEEehhHH-hhHHHHHHHcCcc-ccHHHHHHHHHHHHHhcchhh----cccccccccchhheeeccCCCEEecccccee
Confidence 789999999 5599999886654 888899999999999999999 7899999999999999999999999999999
Q ss_pred ccCCCCCcceeecccccccccCCCcc-CCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC----
Q 003855 651 LLGEGEDSVTQTMTMATIGYMAPEYG-SEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG---- 725 (791)
Q Consensus 651 ~~~~~~~~~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---- 725 (791)
...........+..+.|.+|+|||.+ ....|+...||||.|||+.||++|++-|.+.. ....-+.+....+..
T Consensus 174 ~~~~~~~~~~mTeYVaTRWYRAPElll~~~~Yt~aiDiWSvGCI~AEmL~gkplFpG~d--~v~Ql~lI~~~lGtP~~e~ 251 (359)
T KOG0660|consen 174 YLDKFFEDGFMTEYVATRWYRAPELLLNSSEYTKAIDIWSVGCILAEMLTGKPLFPGKD--YVHQLQLILELLGTPSEED 251 (359)
T ss_pred eccccCcccchhcceeeeeecCHHHHhccccccchhhhhhhhHHHHHHHcCCCCCCCCc--hHHHHHHHHHhcCCCCHHH
Confidence 88654333344566889999999975 55789999999999999999999999887632 112222222222221
Q ss_pred hhhhcchhhhh----hH----Hh-hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 726 LTEVVDANLVR----EE----QA-FSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 726 ~~~~~d~~~~~----~~----~~-~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+..+-...... .+ .. ......+.+...+++.+|+..||.+|+|++|+++
T Consensus 252 l~~i~s~~ar~yi~slp~~p~~~f~~~fp~a~p~AidLlekmL~fdP~kRita~eAL~ 309 (359)
T KOG0660|consen 252 LQKIRSEKARPYIKSLPQIPKQPFSSIFPNANPLAIDLLEKMLVFDPKKRITAEEALA 309 (359)
T ss_pred HHHhccHHHHHHHHhCCCCCCCCHHHHcCCCCHHHHHHHHHHhccCccccCCHHHHhc
Confidence 11111000000 00 00 0111245577889999999999999999999986
No 47
>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity. Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....
Probab=100.00 E-value=8.8e-40 Score=336.77 Aligned_cols=249 Identities=34% Similarity=0.543 Sum_probs=196.6
Q ss_pred cccccCCCcceEEEEEEec-----CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 505 ECNLLGTGSFGSVYKGTIS-----DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 505 ~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
..+.||.|.||.||+|.+. .+..|+||++.... .+..+.+.+|++.+++++||||++++|++...+..++|+||
T Consensus 3 ~~~~ig~G~fg~v~~~~~~~~~~~~~~~V~vk~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~~~~~~~lv~e~ 82 (259)
T PF07714_consen 3 LIKQIGEGSFGKVYRAEWKQKDNDKNQPVAVKILKPSSSEEEEEEFLNEIQILRKLRHPNIVKLYGFCIENEPLFLVMEY 82 (259)
T ss_dssp EEEEEEEESSEEEEEEEEESTTTSSEEEEEEEEESTTSSHHHHHHHHHHHHHHHTHSBTTBE-EEEEEESSSSEEEEEE-
T ss_pred EeeEEccCCCcEEEEEEEEcccCCCCEEEEEEEeccccccccceeeeecccccccccccccccccccccccccccccccc
Confidence 4578999999999999986 36789999996543 34478899999999999999999999999988889999999
Q ss_pred CCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+++|+|.+++... ...+++..+.+|+.||++||.||| +.+++|+||+++||++++++.+||+|||+++.......
T Consensus 83 ~~~g~L~~~L~~~~~~~~~~~~~~~i~~~i~~~l~~Lh----~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~ 158 (259)
T PF07714_consen 83 CPGGSLDDYLKSKNKEPLSEQQRLSIAIQIAEALSYLH----SNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSK 158 (259)
T ss_dssp -TTEBHHHHHHHTCTTTSBHHHHHHHHHHHHHHHHHHH----HTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSS
T ss_pred cccccccccccccccccccccccccccccccccccccc----cccccccccccccccccccccccccccccccccccccc
Confidence 9999999999987 556899999999999999999999 56899999999999999999999999999988743333
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
............|+|||.+.+..++.++||||||+++||+++ |+.||...... .....+..
T Consensus 159 ~~~~~~~~~~~~~~aPE~~~~~~~~~ksDVysfG~~l~ei~~~~~~p~~~~~~~--~~~~~~~~---------------- 220 (259)
T PF07714_consen 159 YKNDSSQQLPLRYLAPEVLKDGEYTKKSDVYSFGMLLYEILTLGKFPFSDYDNE--EIIEKLKQ---------------- 220 (259)
T ss_dssp EEESTTSESGGGGS-HHHHHHSEESHHHHHHHHHHHHHHHHTTSSGTTTTSCHH--HHHHHHHT----------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccc----------------
Confidence 333334457789999999988889999999999999999999 67888654111 11111110
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
......+..++..+.+++.+||+.+|++||+|.+++++|
T Consensus 221 -~~~~~~~~~~~~~~~~li~~C~~~~p~~RPs~~~i~~~L 259 (259)
T PF07714_consen 221 -GQRLPIPDNCPKDIYSLIQQCWSHDPEKRPSFQEILQEL 259 (259)
T ss_dssp -TEETTSBTTSBHHHHHHHHHHT-SSGGGS--HHHHHHHH
T ss_pred -cccceeccchhHHHHHHHHHHcCCChhhCcCHHHHHhcC
Confidence 001111224567788999999999999999999999886
No 48
>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-
Probab=100.00 E-value=9.4e-39 Score=347.04 Aligned_cols=259 Identities=24% Similarity=0.416 Sum_probs=206.7
Q ss_pred hhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhcc-CCccceeeeeeccCCe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVR-HRNLIKILSSCSNPDF 571 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~ 571 (791)
.++|++.+.||+|+||.||+|+.. .+..||||++.... ....+.+..|+.+++++. ||||+++++++.+...
T Consensus 36 ~~~~~~~~~LG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~~~~~~ 115 (400)
T cd05105 36 RDGLVLGRILGSGAFGKVVEGTAYGLSRSQPVMKVAVKMLKPTARSSEKQALMSELKIMTHLGPHLNIVNLLGACTKSGP 115 (400)
T ss_pred ccceehhheecCCCCceEEEEEEcccCCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhcCCCCCeeeEEEEEccCCc
Confidence 467889999999999999999852 23469999986543 334567899999999996 9999999999999999
Q ss_pred eeEEEecCCCCCHHHHHhhCC-----------------------------------------------------------
Q 003855 572 KALVLEFMPNGSLEKWLYSHN----------------------------------------------------------- 592 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~----------------------------------------------------------- 592 (791)
.++||||+++|+|.++++...
T Consensus 116 ~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (400)
T cd05105 116 IYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDIFGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIK 195 (400)
T ss_pred eEEEEEecCCCcHHHHHHHhhhhhhccccccccccccccCCCcccccccchhhhhhcccccccccccccccccchhhhhh
Confidence 999999999999999987421
Q ss_pred ------------------------------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC
Q 003855 593 ------------------------------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD 636 (791)
Q Consensus 593 ------------------------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~ 636 (791)
..+++..+..++.|+++||+||| +.+|+||||||+||+++
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivH~dikp~Nill~ 271 (400)
T cd05105 196 EASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEGLTTLDLLSFTYQVARGMEFLA----SKNCVHRDLAARNVLLA 271 (400)
T ss_pred hhhhhhhcccCcccccccccCcchhhHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChHhEEEe
Confidence 23678888999999999999999 67899999999999999
Q ss_pred CCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHH
Q 003855 637 ENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLR 715 (791)
Q Consensus 637 ~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~ 715 (791)
+++.+||+|||+++...............++..|+|||.+.+..++.++|||||||++|||++ |..||........ ..
T Consensus 272 ~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwSlGvil~ellt~g~~P~~~~~~~~~-~~ 350 (400)
T cd05105 272 QGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKWMAPESIFDNLYTTLSDVWSYGILLWEIFSLGGTPYPGMIVDST-FY 350 (400)
T ss_pred CCCEEEEEeCCcceeccccccccccCCcCCCcceEChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCcccchhHH-HH
Confidence 999999999999987644332222233456788999999988899999999999999999997 8999875322111 11
Q ss_pred HHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 716 RWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
..+.. .. ....+..++..+.+++.+||+.+|++||++.++.++|+++.
T Consensus 351 ~~~~~----~~-------------~~~~~~~~~~~l~~li~~cl~~dP~~RPt~~~l~~~l~~l~ 398 (400)
T cd05105 351 NKIKS----GY-------------RMAKPDHATQEVYDIMVKCWNSEPEKRPSFLHLSDIVESLL 398 (400)
T ss_pred HHHhc----CC-------------CCCCCccCCHHHHHHHHHHCccCHhHCcCHHHHHHHHHHHc
Confidence 11110 00 00111245677889999999999999999999999999864
No 49
>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i
Probab=100.00 E-value=1.8e-38 Score=332.15 Aligned_cols=249 Identities=24% Similarity=0.307 Sum_probs=200.5
Q ss_pred cccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 503 FNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
|+..+.||+|+||.||+|.. .+|+.||||++.... ......+.+|+.++++++|++|+++.+++.+.+..++||||
T Consensus 2 f~~~~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05631 2 FRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEEccCCeEEEEEEe
Confidence 67788999999999999986 479999999987543 22334678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||++++++.++|+|||+++......
T Consensus 82 ~~~g~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~- 156 (285)
T cd05631 82 MNGGDLKFHIYNMGNPGFDEQRAIFYAAELCCGLEDLQ----RERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGE- 156 (285)
T ss_pred cCCCcHHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCC-
Confidence 9999999888643 335899999999999999999999 7789999999999999999999999999998754322
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
......|+..|+|||++.+..++.++|||||||++|||++|+.||........ ... +.......
T Consensus 157 --~~~~~~g~~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~-~~~-~~~~~~~~------------ 220 (285)
T cd05631 157 --TVRGRVGTVGYMAPEVINNEKYTFSPDWWGLGCLIYEMIQGQSPFRKRKERVK-REE-VDRRVKED------------ 220 (285)
T ss_pred --eecCCCCCCCccCHhhhcCCCCCcccCchhHHHHHHHHHhCCCCCCCCCcchh-HHH-HHHHhhcc------------
Confidence 12334689999999999999999999999999999999999999976332111 011 11000000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRIN-----VTDAAA 774 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt-----~~ev~~ 774 (791)
........+..+.+++.+||+.||++||+ +.++++
T Consensus 221 --~~~~~~~~s~~~~~li~~~l~~~P~~R~~~~~~~~~~~~~ 260 (285)
T cd05631 221 --QEEYSEKFSEDAKSICRMLLTKNPKERLGCRGNGAAGVKQ 260 (285)
T ss_pred --cccCCccCCHHHHHHHHHHhhcCHHHhcCCCCCCHHHHhc
Confidence 00111234567789999999999999997 788876
No 50
>KOG1025 consensus Epidermal growth factor receptor EGFR and related tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=1.2e-39 Score=347.85 Aligned_cols=255 Identities=25% Similarity=0.439 Sum_probs=219.0
Q ss_pred cccccccCCCcceEEEEEEe-cCC----cEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 503 FNECNLLGTGSFGSVYKGTI-SDG----TDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~-~~~----~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
.+..++||+|+||+||+|.| ..| .+||+|++.... .+...++..|+.+|.+++|||+++++|+|.... +.+|+
T Consensus 698 lkk~kvLGsgAfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~s~-~qlvt 776 (1177)
T KOG1025|consen 698 LKKDKVLGSGAFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCMLST-LQLVT 776 (1177)
T ss_pred hhhhceeccccceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhcccch-HHHHH
Confidence 44567999999999999986 333 468999886553 445678999999999999999999999998766 88999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
+||+.|+|.+|++.++..+.....+.+..|||+||.||| .+++|||||.++||||.+...+||.|||+|+.+..++
T Consensus 777 q~mP~G~LlDyvr~hr~~igsq~lLnw~~QIAkgM~YLe----~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~ 852 (1177)
T KOG1025|consen 777 QLMPLGCLLDYVREHRDNIGSQDLLNWCYQIAKGMKYLE----EQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDE 852 (1177)
T ss_pred HhcccchHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH----hcchhhhhhhhhheeecCCCeEEEEecchhhccCccc
Confidence 999999999999988888999999999999999999999 7789999999999999999999999999999988776
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
.......-.-.+.|||-|.+....|+.++|||||||++||++| |..||++....+. +.+.
T Consensus 853 ~ey~~~~gK~pikwmale~i~~~~~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI-------------------~dll 913 (1177)
T KOG1025|consen 853 KEYSAPGGKVPIKWMALESIRIRKYTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEI-------------------PDLL 913 (1177)
T ss_pred ccccccccccCcHHHHHHHhhccCCCchhhhhhhhhhHHHHHhcCCCccCCCCHHHh-------------------hHHH
Confidence 6555544455788999999999999999999999999999999 9999987433221 1223
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
+.+.+.+.+..|+..+..++.+||..|+..||+|+++..++.++.+
T Consensus 914 e~geRLsqPpiCtiDVy~~mvkCwmid~~~rp~fkel~~~fs~~ar 959 (1177)
T KOG1025|consen 914 EKGERLSQPPICTIDVYMVMVKCWMIDADSRPTFKELAEEFSRMAR 959 (1177)
T ss_pred hccccCCCCCCccHHHHHHHHHHhccCcccCccHHHHHHHHHHHhc
Confidence 3333456677899999999999999999999999999999988754
No 51
>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor
Probab=100.00 E-value=1e-38 Score=339.35 Aligned_cols=258 Identities=25% Similarity=0.436 Sum_probs=207.3
Q ss_pred hccccccccCCCcceEEEEEEec-CCc----EEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGT----DVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
.+|+..+.||+|+||.||+|++. +++ .||+|++.... ....+.+..|+.+++.++||||++++|+|... ..++
T Consensus 7 ~~f~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~g~~~~~-~~~~ 85 (316)
T cd05108 7 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTS-TVQL 85 (316)
T ss_pred hhceeeeeeecCCCceEEEEEEecCCCccceeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEcCC-Ccee
Confidence 56899999999999999999864 333 48999986443 34456788999999999999999999999765 5679
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
|+||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||++++++.+||+|||+++.+..
T Consensus 86 v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH----~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~ 161 (316)
T cd05108 86 ITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNYLE----ERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGA 161 (316)
T ss_pred eeecCCCCCHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH----hcCeeccccchhheEecCCCcEEEccccccccccC
Confidence 99999999999999987666899999999999999999999 67899999999999999999999999999987654
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
...........++..|+|||++.+..++.++|||||||++|||++ |+.||++.... .....+....
T Consensus 162 ~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slGv~l~el~t~g~~p~~~~~~~--~~~~~~~~~~----------- 228 (316)
T cd05108 162 DEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPAS--EISSILEKGE----------- 228 (316)
T ss_pred CCcceeccCCccceeecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHhCCC-----------
Confidence 433222222334678999999999999999999999999999998 99998753211 1111111100
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
..+.+..++..+.+++.+||..+|++||++.++++.+..+.+.
T Consensus 229 ------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~l~~~l~~~~~~ 271 (316)
T cd05108 229 ------RLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFSKMARD 271 (316)
T ss_pred ------CCCCCCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHcC
Confidence 0011123445678999999999999999999999999888654
No 52
>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer
Probab=100.00 E-value=1.3e-38 Score=333.36 Aligned_cols=255 Identities=26% Similarity=0.498 Sum_probs=207.6
Q ss_pred hccccccccCCCcceEEEEEEecC------CcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISD------GTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 573 (791)
++|++.+.||+|+||.||+|.... ...||+|.+.... ......+.+|+.++++++||||+++++++.+....+
T Consensus 5 ~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~ 84 (283)
T cd05048 5 SAVRFLEELGEGAFGKVYKGELTGPNERLSATSVAIKTLKENAEPKVQQEFRQEAELMSDLQHPNIVCLLGVCTKEQPTC 84 (283)
T ss_pred HHcchhhcccCccCCcEEEEEEecCCCCcceeeEEEEecccCCCHHHHHHHHHHHHHHHhcCCcccceEEEEEcCCCceE
Confidence 578889999999999999998642 2579999886543 334567889999999999999999999999888999
Q ss_pred EEEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC
Q 003855 574 LVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN 638 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~ 638 (791)
++|||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||+++++
T Consensus 85 ~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~al~~lH----~~~i~H~dlkp~Nil~~~~ 160 (283)
T cd05048 85 MLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSSLDCSDFLHIAIQIAAGMEYLS----SHHFVHRDLAARNCLVGEG 160 (283)
T ss_pred EEEecCCCCcHHHHHHhcCCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccccceEEEcCC
Confidence 9999999999999997531 34788899999999999999999 6789999999999999999
Q ss_pred CcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHH
Q 003855 639 MAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRW 717 (791)
Q Consensus 639 ~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~ 717 (791)
+.++|+|||+++...............++..|+|||.+.++.++.++|||||||++|||++ |..||.+.... .....
T Consensus 161 ~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDv~slG~il~el~~~g~~p~~~~~~~--~~~~~ 238 (283)
T cd05048 161 LTVKISDFGLSRDIYSADYYRVQSKSLLPVRWMPPEAILYGKFTTESDIWSFGVVLWEIFSYGLQPYYGFSNQ--EVIEM 238 (283)
T ss_pred CcEEECCCcceeeccccccccccCCCcccccccCHHHhccCcCchhhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHH
Confidence 9999999999986644333223334456788999999988899999999999999999998 99998753221 11111
Q ss_pred HHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 718 VKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 718 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
+.... ....+..++.++.+++.+||+.||.+||++.||++.|++
T Consensus 239 i~~~~-----------------~~~~~~~~~~~~~~l~~~c~~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05048 239 IRSRQ-----------------LLPCPEDCPARVYALMIECWNEIPARRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCC-----------------cCCCcccCCHHHHHHHHHHccCChhhCcCHHHHHHHHhc
Confidence 11100 001123567889999999999999999999999999975
No 53
>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt
Probab=100.00 E-value=1e-38 Score=334.88 Aligned_cols=245 Identities=25% Similarity=0.319 Sum_probs=200.7
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+|+.. +++.||+|++.... .+..+.+.+|+.++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (291)
T cd05612 1 DDLERIKTVGTGTFGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTEHDQRFLYMLM 80 (291)
T ss_pred CCceeeeeeecCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhhccCCeEEEEE
Confidence 46889999999999999999975 78999999987543 234567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~ 155 (291)
T cd05612 81 EYVPGGELFSYLRNSG-RFSNSTGLFYASEIVCALEYLH----SKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRT 155 (291)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCc
Confidence 9999999999998654 3888999999999999999999 6789999999999999999999999999998654321
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
....|++.|+|||++.+..++.++|||||||++|||++|+.||...... ..+........
T Consensus 156 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~~l~~g~~pf~~~~~~-----~~~~~i~~~~~---------- 215 (291)
T cd05612 156 -----WTLCGTPEYLAPEVIQSKGHNKAVDWWALGILIYEMLVGYPPFFDDNPF-----GIYEKILAGKL---------- 215 (291)
T ss_pred -----ccccCChhhcCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhCCc----------
Confidence 2246899999999998888999999999999999999999999753211 11111100000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRIN-----VTDAAAK 775 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt-----~~ev~~~ 775 (791)
..+..++..+.+++.+|++.||.+||+ +.|+++.
T Consensus 216 -----~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~h 254 (291)
T cd05612 216 -----EFPRHLDLYAKDLIKKLLVVDRTRRLGNMKNGADDVKNH 254 (291)
T ss_pred -----CCCccCCHHHHHHHHHHcCCCHHHccCCccCCHHHHhcC
Confidence 001123456789999999999999995 7777653
No 54
>KOG0580 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.9e-39 Score=299.42 Aligned_cols=248 Identities=25% Similarity=0.312 Sum_probs=208.8
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
+.++|++.+.||+|.||.||.|+.+ ++..||+|++.+.. .+...++.+|+++-+.++||||++++++|.+....|+
T Consensus 20 ~l~dfeigr~LgkgkFG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~fhd~~riyL 99 (281)
T KOG0580|consen 20 TLDDFEIGRPLGKGKFGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYFHDSKRIYL 99 (281)
T ss_pred chhhccccccccCCccccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhheeccceeEE
Confidence 3478999999999999999999965 67889999987653 3445678999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 575 VLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
++||..+|++...++.. ...+++.....++.|+|.|+.|+| .++|+||||||+|+|++.++..||+|||.+....
T Consensus 100 ilEya~~gel~k~L~~~~~~~f~e~~~a~Yi~q~A~Al~y~h----~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p 175 (281)
T KOG0580|consen 100 ILEYAPRGELYKDLQEGRMKRFDEQRAATYIKQLANALLYCH----LKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 175 (281)
T ss_pred EEEecCCchHHHHHHhcccccccccchhHHHHHHHHHHHHhc----cCCcccCCCCHHHhccCCCCCeeccCCCceeecC
Confidence 99999999999999944 335888889999999999999999 7889999999999999999999999999987543
Q ss_pred CCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
.......+||..|.|||...+..++.++|+|++|++.||++.|.+||+... ....+.+..+. +..+
T Consensus 176 ----~~kR~tlcgt~dyl~pEmv~~~~hd~~Vd~w~lgvl~yeflvg~ppFes~~-~~etYkrI~k~-------~~~~-- 241 (281)
T KOG0580|consen 176 ----SNKRKTLCGTLDYLPPEMVEGRGHDKFVDLWSLGVLCYEFLVGLPPFESQS-HSETYKRIRKV-------DLKF-- 241 (281)
T ss_pred ----CCCceeeecccccCCHhhcCCCCccchhhHHHHHHHHHHHHhcCCchhhhh-hHHHHHHHHHc-------cccC--
Confidence 223344679999999999999999999999999999999999999998744 22222222111 1111
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+..++.+..++|.+|+..+|.+|.+..|+++
T Consensus 242 ----------p~~is~~a~dlI~~ll~~~p~~r~~l~~v~~ 272 (281)
T KOG0580|consen 242 ----------PSTISGGAADLISRLLVKNPIERLALTEVMD 272 (281)
T ss_pred ----------CcccChhHHHHHHHHhccCccccccHHHHhh
Confidence 1245566789999999999999999999876
No 55
>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3. Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r
Probab=100.00 E-value=2e-38 Score=330.79 Aligned_cols=259 Identities=24% Similarity=0.395 Sum_probs=206.4
Q ss_pred hccccccccCCCcceEEEEEEec-CCc----EEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGT----DVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
++|+..+.||+|+||.||+|.+. +++ .|++|.+.... ......+..|+..+++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~l~~l~h~~iv~~~~~~~~-~~~~~ 85 (279)
T cd05111 7 TELRKLKLLGSGVFGTVHKGIWIPEGDSIKIPVAIKTIQDRSGRQTFQEITDHMLAMGSLDHAYIVRLLGICPG-ASLQL 85 (279)
T ss_pred hhceeccccCccCCcceEEEEEcCCCCceeeEEEEeecccccchHHHHHHHHHHHHHhcCCCCCcceEEEEECC-CccEE
Confidence 57888999999999999999864 444 47788775432 3345677888889999999999999999864 45678
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
++||+++|+|.+++......+++..+..++.||+.||+||| +.+++||||||+||++++++.+||+|||+++....
T Consensus 86 i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~ 161 (279)
T cd05111 86 VTQLSPLGSLLDHVRQHRDSLDPQRLLNWCVQIAKGMYYLE----EHRMVHRNLAARNILLKSDSIVQIADFGVADLLYP 161 (279)
T ss_pred EEEeCCCCcHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCEeccccCcceEEEcCCCcEEEcCCccceeccC
Confidence 99999999999999876667899999999999999999999 67899999999999999999999999999987654
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
...........++..|+|||+..++.++.++|||||||++||+++ |+.||.+.... ...+++.....
T Consensus 162 ~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~~--~~~~~~~~~~~---------- 229 (279)
T cd05111 162 DDKKYFYSEHKTPIKWMALESILFGRYTHQSDVWSYGVTVWEMMSYGAEPYAGMRPH--EVPDLLEKGER---------- 229 (279)
T ss_pred CCcccccCCCCCcccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHCCCc----------
Confidence 433223333456788999999988899999999999999999998 99998754221 12222211000
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
.+.+..++..+.+++.+||..+|++||++.|+++.|..+.+..
T Consensus 230 -------~~~~~~~~~~~~~li~~c~~~~p~~Rps~~el~~~l~~~~~~~ 272 (279)
T cd05111 230 -------LAQPQICTIDVYMVMVKCWMIDENVRPTFKELANEFTRMARDP 272 (279)
T ss_pred -------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHhCC
Confidence 0011123455678999999999999999999999999986644
No 56
>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2. Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=3.4e-38 Score=337.12 Aligned_cols=265 Identities=23% Similarity=0.299 Sum_probs=205.8
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
.++|++.+.||+|+||.||+++.. ++..||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (331)
T cd06649 4 DDDFERISELGAGNGGVVTKVQHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (331)
T ss_pred cccceEEEeecCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCCCCeEEEEEEECCEEEEEee
Confidence 368999999999999999999975 68899999987653 3345678999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|+++|+|.+++.... .+++..+..++.|++.||.|||+ ..+|+||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~---~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~- 158 (331)
T cd06649 84 HMDGGSLDQVLKEAK-RIPEEILGKVSIAVLRGLAYLRE---KHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (331)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHhh---cCCEEcCCCChhhEEEcCCCcEEEccCcccccccccc-
Confidence 999999999998654 38899999999999999999993 2369999999999999999999999999997653321
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC------------
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG------------ 725 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------------ 725 (791)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||...... .+...+.......
T Consensus 159 ---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (331)
T cd06649 159 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVELAIGRYPIPPPDAK--ELEAIFGRPVVDGEEGEPHSISPRP 233 (331)
T ss_pred ---cccCCCCcCcCCHhHhcCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHhcccccccccCCccccCccc
Confidence 22346899999999999889999999999999999999999999653221 1111111100000
Q ss_pred -------------------hhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 726 -------------------LTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 726 -------------------~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..+..+. +............++.++.+++.+||+.||++|||+.|+++.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~li~~~L~~~P~~Rpt~~ell~h 301 (331)
T cd06649 234 RPPGRPVSGHGMDSRPAMAIFELLDY-IVNEPPPKLPNGVFTPDFQEFVNKCLIKNPAERADLKMLMNH 301 (331)
T ss_pred ccccccccccccccccchhHHHHHHH-HHhCCCcCCCCccccHHHHHHHHHHccCCcccCCCHHHHhcC
Confidence 0000000 000000000011355778999999999999999999999875
No 57
>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment
Probab=100.00 E-value=3e-38 Score=327.28 Aligned_cols=257 Identities=26% Similarity=0.454 Sum_probs=208.9
Q ss_pred hhccccccccCCCcceEEEEEEec----CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS----DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
.++|+..+.||+|+||.||+|+++ +...||||++.... ......+..|+.++++++||||+++++++...+..++
T Consensus 3 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~i 82 (266)
T cd05033 3 PSYVTIEKVIGGGEFGEVCRGRLKLPGKKEIDVAIKTLKAGSSDKQRLDFLTEASIMGQFDHPNIIRLEGVVTKSRPVMI 82 (266)
T ss_pred hHHceeeeEecCCccceEEEEEEccCCCCcceEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCcceEeEEEecCCceEE
Confidence 367889999999999999999874 24579999886543 3445678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||+++|+|.+++......+++..+.+++.|++.|++||| +.+|+||||||+||++++++.++++|||+++....
T Consensus 83 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh----~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~ 158 (266)
T cd05033 83 ITEYMENGSLDKFLRENDGKFTVGQLVGMLRGIASGMKYLS----EMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLED 158 (266)
T ss_pred EEEcCCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCcceEEEcCCCCEEECccchhhcccc
Confidence 99999999999999876667899999999999999999999 67899999999999999999999999999988752
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
...........++..|+|||...+..++.++||||||+++|||++ |..||...... ...+.+....
T Consensus 159 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~Dv~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~----------- 225 (266)
T cd05033 159 SEATYTTKGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSYGERPYWDMSNQ--DVIKAVEDGY----------- 225 (266)
T ss_pred cccceeccCCCCCccccChhhhccCCCccccchHHHHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCC-----------
Confidence 222222222335678999999988899999999999999999998 99998653211 1111111100
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+.+..++..+.+++.+|++.+|++||++.|+++.|.++
T Consensus 226 ------~~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~ei~~~l~~~ 265 (266)
T cd05033 226 ------RLPPPMDCPSALYQLMLDCWQKDRNERPTFSQIVSTLDKM 265 (266)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0011123456788999999999999999999999999875
No 58
>KOG0588 consensus Serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=4.2e-39 Score=337.92 Aligned_cols=247 Identities=26% Similarity=0.357 Sum_probs=207.0
Q ss_pred hccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
.-|+.++.||+|+-|.|..|++ .+|+.+|||++.+.. ......+++|+-+|+-+.|||++++++.+++..++|+|.
T Consensus 12 GpwkLgkTLG~Gstg~vrlakh~~TGqlaaiKii~k~~~~s~s~~~~IerEIviMkLi~HpnVl~LydVwe~~~~lylvl 91 (786)
T KOG0588|consen 12 GPWKLGKTLGKGSTGCVRLAKHAETGQLAAIKIIPKRSELSSSQPAGIEREIVIMKLIEHPNVLRLYDVWENKQHLYLVL 91 (786)
T ss_pred cceeccccccCCCCceehhhhcccccceeEEEeeccccccccccccchhhhhHHHHHhcCCCeeeeeeeeccCceEEEEE
Confidence 4577889999999999999996 489999999997653 233456889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|-|++++-.++. +++.+..+++.||..|+.|+| ..+|+|||+||+|+|+|..+++||+|||+|..-.++
T Consensus 92 Eyv~gGELFdylv~kG~-l~e~eaa~ff~QIi~gv~yCH----~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~g- 165 (786)
T KOG0588|consen 92 EYVPGGELFDYLVRKGP-LPEREAAHFFRQILDGVSYCH----AFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPG- 165 (786)
T ss_pred EecCCchhHHHHHhhCC-CCCHHHHHHHHHHHHHHHHHh----hhcceeccCCchhhhhhcccCEeeeccceeecccCC-
Confidence 99999999999987765 788888999999999999999 678999999999999999999999999999764332
Q ss_pred CcceeecccccccccCCCccCCCCCC-ccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVS-AKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
......+|++.|.|||++.+..|. .++||||.|||+|.|+||+.||++. .++..... +..
T Consensus 166 --klLeTSCGSPHYA~PEIV~G~pYdG~~sDVWSCGVILfALLtG~LPFdDd-----Nir~LLlK-V~~----------- 226 (786)
T KOG0588|consen 166 --KLLETSCGSPHYAAPEIVSGRPYDGRPSDVWSCGVILFALLTGKLPFDDD-----NIRVLLLK-VQR----------- 226 (786)
T ss_pred --ccccccCCCcccCCchhhcCCCCCCCccccchhHHHHHHHHhCCCCCCCc-----cHHHHHHH-HHc-----------
Confidence 233446899999999999988764 5899999999999999999999852 22222111 111
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
+.+.-+..++.+..+|+++|+..||++|.|+.||.+.
T Consensus 227 ---G~f~MPs~Is~eaQdLLr~ml~VDp~~RiT~~eI~kH 263 (786)
T KOG0588|consen 227 ---GVFEMPSNISSEAQDLLRRMLDVDPSTRITTEEILKH 263 (786)
T ss_pred ---CcccCCCcCCHHHHHHHHHHhccCccccccHHHHhhC
Confidence 1222234567788899999999999999999999874
No 59
>KOG2345 consensus Serine/threonine protein kinase/TGF-beta stimulated factor [Transcription; Lipid transport and metabolism; Signal transduction mechanisms]
Probab=100.00 E-value=5.8e-39 Score=298.71 Aligned_cols=263 Identities=22% Similarity=0.286 Sum_probs=210.2
Q ss_pred HhhccccccccCCCcceEEEEEE-ecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccC-----Cee
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGT-ISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNP-----DFK 572 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 572 (791)
..++|++.+.+|+|||+.||.++ ..+++.||+|++.....+..+...+|++..++++|||+++++++...+ ...
T Consensus 19 n~~Ryri~~~LgeGGfsfv~LV~~~s~~~~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D~~~~~ 98 (302)
T KOG2345|consen 19 NNKRYRIQRLLGEGGFSFVDLVKGLSTGHLYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKDGKHEA 98 (302)
T ss_pred cCceEEEeeeecCCCceeeeeecccCcccchhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhccCceeE
Confidence 34689999999999999999998 568899999999888777788899999999999999999999988543 348
Q ss_pred eEEEecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 573 ALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
|++++|...|+|.+.+.. .+..+++.+++.|+.+|++||.+||.. ..+++||||||.||++.+++.+++.|||.+
T Consensus 99 yll~Pyy~~Gsl~d~i~~~k~kg~~~sE~~iL~if~gic~gL~~lH~~--~~~yAH~DiKP~NILls~~~~~vl~D~GS~ 176 (302)
T KOG2345|consen 99 YLLLPYYKRGSLLDEIERLKIKGNFVSEAQILWIFLGICRGLEALHEK--EPPYAHRDIKPANILLSDSGLPVLMDLGSA 176 (302)
T ss_pred EEEeehhccccHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHhcc--CCcccccCCCcceeEecCCCceEEEeccCc
Confidence 999999999999999983 345799999999999999999999953 235999999999999999999999999999
Q ss_pred cccCCCCCcc-------eeecccccccccCCCcc---CCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHH
Q 003855 650 KLLGEGEDSV-------TQTMTMATIGYMAPEYG---SEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVK 719 (791)
Q Consensus 650 ~~~~~~~~~~-------~~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~ 719 (791)
+...-..... .+....-|.-|+|||.+ .+...++++|||||||++|+|+.|..||+.......++.-
T Consensus 177 ~~a~i~i~~~~~a~~lQe~a~e~Ct~pyRAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaL--- 253 (302)
T KOG2345|consen 177 TQAPIQIEGSRQALRLQEWAEERCTIPYRAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLAL--- 253 (302)
T ss_pred cccceEeechHHHHHHHHHHHHhCCCcccCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEE---
Confidence 7654221111 12223458889999964 3566889999999999999999999999864332222111
Q ss_pred HhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 720 ESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 720 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
.+....+ ..+....+++.+.+++..|++.||.+||++.+++..+..+
T Consensus 254 --------Av~n~q~-----s~P~~~~yse~l~~lik~mlqvdP~qRP~i~~ll~~~d~L 300 (302)
T KOG2345|consen 254 --------AVQNAQI-----SIPNSSRYSEALHQLIKSMLQVDPNQRPTIPELLSKLDDL 300 (302)
T ss_pred --------eeecccc-----ccCCCCCccHHHHHHHHHHhcCCcccCCCHHHHHHHHHhh
Confidence 1111111 1122223678889999999999999999999999988765
No 60
>KOG0033 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=1.4e-40 Score=308.07 Aligned_cols=251 Identities=24% Similarity=0.358 Sum_probs=204.7
Q ss_pred hhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
.++|++.+.||+|.|+.||++.. .+|+.+|+|++.... ....+.+.+|+++.+.++|||||++.+........|+||
T Consensus 10 ~d~y~l~e~igkG~FSvVrRc~~~~tg~~fa~kiin~~k~~~~~~e~l~rEarIC~~LqHP~IvrL~~ti~~~~~~ylvF 89 (355)
T KOG0033|consen 10 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSIQEESFHYLVF 89 (355)
T ss_pred chhhhHHHHHccCchHHHHHHHhccchHHHHHHHhhhhhhccccHHHHHHHHHHHHhcCCCcEeehhhhhcccceeEEEE
Confidence 46788889999999999999875 489999999886543 346788999999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC---CCCcEEEeeeccccccC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD---ENMAAHVSDFGISKLLG 653 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~---~~~~~kl~Dfgla~~~~ 653 (791)
|+|+||+|..-+-++ ..+++..+...++||++||.|+| .++|||||+||+|+++- ...-+|++|||+|..+.
T Consensus 90 e~m~G~dl~~eIV~R-~~ySEa~aSH~~rQiLeal~yCH----~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~ 164 (355)
T KOG0033|consen 90 DLVTGGELFEDIVAR-EFYSEADASHCIQQILEALAYCH----SNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVN 164 (355)
T ss_pred ecccchHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH----hcCceeccCChhheeeeeccCCCceeecccceEEEeC
Confidence 999999997666544 33677888889999999999999 77899999999999995 34469999999999887
Q ss_pred CCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
.+. .....+||++|||||+.+..+|+..+|||+.|||+|-++.|..||.+... ...+.+..+. ..+
T Consensus 165 ~g~---~~~G~~GtP~fmaPEvvrkdpy~kpvDiW~cGViLfiLL~G~~PF~~~~~-~rlye~I~~g-----~yd----- 230 (355)
T KOG0033|consen 165 DGE---AWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQ-HRLYEQIKAG-----AYD----- 230 (355)
T ss_pred Ccc---ccccccCCCcccCHHHhhcCCCCCcchhhhhhHHHHHHHhCCCCCCCccH-HHHHHHHhcc-----ccC-----
Confidence 332 34457899999999999999999999999999999999999999976211 1111111111 000
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...+++..++++..+++++|+..||++|.|+.|+++
T Consensus 231 -----~~~~~w~~is~~Ak~LvrrML~~dP~kRIta~EAL~ 266 (355)
T KOG0033|consen 231 -----YPSPEWDTVTPEAKSLIRRMLTVNPKKRITADEALK 266 (355)
T ss_pred -----CCCcccCcCCHHHHHHHHHHhccChhhhccHHHHhC
Confidence 011233456678889999999999999999999874
No 61
>KOG0199 consensus ACK and related non-receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-39 Score=339.66 Aligned_cols=258 Identities=25% Similarity=0.384 Sum_probs=214.8
Q ss_pred ccccccccCCCcceEEEEEEec--CC--cEEEEEEeehhhhH-HHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS--DG--TDVAIKIFNLQLER-AFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~--~~--~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
+....++||+|.||+|++|.|. .| ..||||.+...... ...+|.+|+.+|-+++|||+++++|...+ ...++||
T Consensus 111 ~i~l~e~LG~GsFgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvVl~-qp~mMV~ 189 (1039)
T KOG0199|consen 111 QIKLYELLGEGSFGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVVLD-QPAMMVF 189 (1039)
T ss_pred HHHHHHHhcCcceeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeeecc-chhhHHh
Confidence 3455678999999999999985 34 35899999876543 67899999999999999999999999987 6678999
Q ss_pred ecCCCCCHHHHHhh-CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 577 EFMPNGSLEKWLYS-HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 577 e~~~~g~L~~~l~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
|.++.|+|.+.|++ ....+.......++.|||.||.||. +++.|||||.++|+++-..-.|||+|||+.+-++..
T Consensus 190 ELaplGSLldrLrka~~~~llv~~Lcdya~QiA~aM~YLe----skrlvHRDLAARNlllasprtVKI~DFGLmRaLg~n 265 (1039)
T KOG0199|consen 190 ELAPLGSLLDRLRKAKKAILLVSRLCDYAMQIAKAMQYLE----SKRLVHRDLAARNLLLASPRTVKICDFGLMRALGEN 265 (1039)
T ss_pred hhcccchHHHHHhhccccceeHHHHHHHHHHHHHHHHHHh----hhhhhhhhhhhhhheecccceeeeecccceeccCCC
Confidence 99999999999997 4556788888999999999999999 788999999999999999999999999999998877
Q ss_pred CCcceeec-ccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 656 EDSVTQTM-TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 656 ~~~~~~~~-~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
+..+.+.. ..-.+.|.|||.+....++.++|||+|||++|||+| |+.||-+.... . +-+.+|
T Consensus 266 ed~Yvm~p~rkvPfAWCaPEsLrh~kFShaSDvWmyGVTiWEMFtyGEePW~G~~g~-q-------------IL~~iD-- 329 (1039)
T KOG0199|consen 266 EDMYVMAPQRKVPFAWCAPESLRHRKFSHASDVWMYGVTIWEMFTYGEEPWVGCRGI-Q-------------ILKNID-- 329 (1039)
T ss_pred CcceEecCCCcCcccccCHhHhccccccccchhhhhhhhHHhhhccCCCCCCCCCHH-H-------------HHHhcc--
Confidence 66554332 345678999999999999999999999999999999 78898763211 0 111122
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
+....+.+..|++.+++++.+||...|++||||..+.+.+-...++.
T Consensus 330 ---~~erLpRPk~csedIY~imk~cWah~paDRptFsair~~~~l~eaqp 376 (1039)
T KOG0199|consen 330 ---AGERLPRPKYCSEDIYQIMKNCWAHNPADRPTFSAIREDLVLAEAQP 376 (1039)
T ss_pred ---ccccCCCCCCChHHHHHHHHHhccCCccccccHHHHHHhHHHHhcCC
Confidence 22344566789999999999999999999999999987665554443
No 62
>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly
Probab=100.00 E-value=2.6e-38 Score=331.60 Aligned_cols=259 Identities=28% Similarity=0.447 Sum_probs=209.9
Q ss_pred hccccccccCCCcceEEEEEEec------CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
++|.+.+.||+|+||.||++... ++..+|+|.+........+.+..|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (288)
T cd05093 5 HNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIM 84 (288)
T ss_pred HHeeeccccCCcCCeeEEeeEeccCCCCCcceEEEEEecCCcCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEE
Confidence 57889999999999999999742 356689999876655566788999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEE
Q 003855 575 VLEFMPNGSLEKWLYSHN------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAH 642 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~k 642 (791)
||||+++++|.+++.... ..+++..+..++.|++.||+||| ..+++||||||+||++++++.++
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ql~~aL~~lH----~~~i~H~dlkp~Nili~~~~~~k 160 (288)
T cd05093 85 VFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELTQSQMLHIAQQIAAGMVYLA----SQHFVHRDLATRNCLVGENLLVK 160 (288)
T ss_pred EEEcCCCCCHHHHHHHcCCccccccccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccCcceEEEccCCcEE
Confidence 999999999999997442 24899999999999999999999 67899999999999999999999
Q ss_pred EeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHh
Q 003855 643 VSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKES 721 (791)
Q Consensus 643 l~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 721 (791)
|+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||......+ ....+..
T Consensus 161 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~--~~~~i~~- 237 (288)
T cd05093 161 IGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNE--VIECITQ- 237 (288)
T ss_pred eccCCccccccCCceeecCCCCCccccccCHHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHc-
Confidence 999999986643332222233345778999999988889999999999999999998 888986532211 1111111
Q ss_pred cCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 722 LPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 722 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
.... .....++.++.+++.+||+.+|.+|||+.|+.+.|+.+.+.
T Consensus 238 --~~~~--------------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~v~~~l~~~~~~ 282 (288)
T cd05093 238 --GRVL--------------QRPRTCPKEVYDLMLGCWQREPHMRLNIKEIHSLLQNLAKA 282 (288)
T ss_pred --CCcC--------------CCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHHHHHh
Confidence 0000 00112445688999999999999999999999999999764
No 63
>PTZ00263 protein kinase A catalytic subunit; Provisional
Probab=100.00 E-value=1.2e-38 Score=340.17 Aligned_cols=244 Identities=26% Similarity=0.288 Sum_probs=200.3
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+++..++||
T Consensus 18 ~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~ 97 (329)
T PTZ00263 18 SDFEMGETLGTGSFGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSFQDENRVYFLL 97 (329)
T ss_pred hheEEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEEEcCCEEEEEE
Confidence 67899999999999999999975 68999999987543 234567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++..... +++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 98 e~~~~~~L~~~l~~~~~-~~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~ 172 (329)
T PTZ00263 98 EFVVGGELFTHLRKAGR-FPNDVAKFYHAELVLAFEYLH----SKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRT 172 (329)
T ss_pred cCCCCChHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCc
Confidence 99999999999986543 788889999999999999999 6789999999999999999999999999998764322
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
....|++.|+|||++.+..++.++|||||||++|||++|+.||..... . +..........
T Consensus 173 -----~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~----~-~~~~~i~~~~~---------- 232 (329)
T PTZ00263 173 -----FTLCGTPEYLAPEVIQSKGHGKAVDWWTMGVLLYEFIAGYPPFFDDTP----F-RIYEKILAGRL---------- 232 (329)
T ss_pred -----ceecCChhhcCHHHHcCCCCCCcceeechHHHHHHHHcCCCCCCCCCH----H-HHHHHHhcCCc----------
Confidence 124689999999999998899999999999999999999999865211 1 11111110000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRIN-----VTDAAA 774 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt-----~~ev~~ 774 (791)
..+..++..+.+++.+||+.||++||+ +.|+++
T Consensus 233 -----~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 270 (329)
T PTZ00263 233 -----KFPNWFDGRARDLVKGLLQTDHTKRLGTLKGGVADVKN 270 (329)
T ss_pred -----CCCCCCCHHHHHHHHHHhhcCHHHcCCCCCCCHHHHhc
Confidence 001113355779999999999999997 677763
No 64
>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto
Probab=100.00 E-value=2.8e-38 Score=337.79 Aligned_cols=260 Identities=26% Similarity=0.423 Sum_probs=205.8
Q ss_pred hhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeecc-CC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSN-PD 570 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~-~~ 570 (791)
.++|++.+.||+|+||.||+|... +++.||+|++.... ....+.+..|+.++.++ +||||++++++|.. ..
T Consensus 6 ~~~~~i~~~lG~G~fg~Vy~a~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~~~~l~~h~niv~~~~~~~~~~~ 85 (337)
T cd05054 6 RDRLKLGKPLGRGAFGKVIQASAFGIEKSASCRTVAVKMLKEGATASEYKALMTELKILIHIGHHLNVVNLLGACTKPGG 85 (337)
T ss_pred HHHhhhhcccccCcCceEEeccccccccccccceeeeeeccCCCCHHHHHHHHHHHHHHHhhccCcchhheeeeEecCCC
Confidence 357999999999999999999642 35789999987543 23346678899999999 89999999998864 45
Q ss_pred eeeEEEecCCCCCHHHHHhhCC----------------------------------------------------------
Q 003855 571 FKALVLEFMPNGSLEKWLYSHN---------------------------------------------------------- 592 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 592 (791)
..++||||+++|+|.+++....
T Consensus 86 ~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
T cd05054 86 PLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMKQKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDEL 165 (337)
T ss_pred CEEEEEecCCCCCHHHHHHhccccccccccccccccccccccccccccccCCccccccccccccCcchhhcccchhhhHH
Confidence 6789999999999999986421
Q ss_pred --CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecccccccc
Q 003855 593 --YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGY 670 (791)
Q Consensus 593 --~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y 670 (791)
..+++..+.+++.||+.||+||| +.+|+||||||+||++++++.++|+|||+++.+.............++..|
T Consensus 166 ~~~~l~~~~~~~~~~qi~~aL~~lH----~~~ivHrDikp~Nill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y 241 (337)
T cd05054 166 YKEPLTLEDLISYSFQVARGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW 241 (337)
T ss_pred hhcCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCcceEEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc
Confidence 25789999999999999999999 678999999999999999999999999999876443333333334567789
Q ss_pred cCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHH
Q 003855 671 MAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCIL 749 (791)
Q Consensus 671 ~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~ 749 (791)
+|||++.+..++.++|||||||++|||++ |..||.+....+ .+...+...... ..+..++.
T Consensus 242 ~aPE~~~~~~~~~~~Di~SlGv~l~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~-----------------~~~~~~~~ 303 (337)
T cd05054 242 MAPESIFDKVYTTQSDVWSFGVLLWEIFSLGASPYPGVQIDE-EFCRRLKEGTRM-----------------RAPEYATP 303 (337)
T ss_pred cCcHHhcCCCCCccccHHHHHHHHHHHHHcCCCCCCCCCccH-HHHHHHhccCCC-----------------CCCccCCH
Confidence 99999999999999999999999999998 999987532221 111111110000 00113346
Q ss_pred HHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 750 SIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 750 ~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
++.+++.+||+.+|++||++.|+++.|+++..
T Consensus 304 ~~~~l~~~cl~~~p~~RPs~~ell~~l~~~~~ 335 (337)
T cd05054 304 EIYSIMLDCWHNNPEDRPTFSELVEILGDLLQ 335 (337)
T ss_pred HHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 68899999999999999999999999998754
No 65
>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h
Probab=100.00 E-value=7.5e-38 Score=322.35 Aligned_cols=251 Identities=26% Similarity=0.377 Sum_probs=203.2
Q ss_pred hccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
++|+..+.||+|+||.||+|.++++..+|+|.+.... ...+.+..|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~a~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~iv~e~~~ 82 (256)
T cd05114 4 SELTFMKELGSGQFGVVHLGKWRAQIKVAIKAINEGA-MSEEDFIEEAKVMMKLSHPKLVQLYGVCTQQKPLYIVTEFME 82 (256)
T ss_pred HHcEEeeEecCCcCceEEEEEeccCceEEEEecccCC-ccHHHHHHHHHHHHHCCCCCceeEEEEEccCCCEEEEEEcCC
Confidence 5688899999999999999999888899999876432 223578889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+|+|.++++.....+++..+..++.|++.||+||| ..+++||||||+||++++++.+|++|||.++....... ..
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~-~~ 157 (256)
T cd05114 83 NGCLLNYLRQRQGKLSKDMLLSMCQDVCEGMEYLE----RNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEY-TS 157 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH----HCCccccccCcceEEEcCCCeEEECCCCCccccCCCce-ec
Confidence 99999999865556899999999999999999999 67899999999999999999999999999986543221 11
Q ss_pred eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 661 QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
.....++..|+|||+.....++.++||||||+++|||++ |+.||..... ......+......
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~s~G~~l~el~~~g~~p~~~~~~--~~~~~~i~~~~~~--------------- 220 (256)
T cd05114 158 SSGAKFPVKWSPPEVFNFSKYSSKSDVWSFGVLMWEVFTEGKMPFEKKSN--YEVVEMISRGFRL--------------- 220 (256)
T ss_pred cCCCCCchhhCChhhcccCccchhhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCCC---------------
Confidence 122235668999999988889999999999999999999 8999865321 1111111110000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
..+...+..+.+++.+||+.+|++||++.|+++.|
T Consensus 221 --~~~~~~~~~~~~li~~c~~~~p~~Rps~~~l~~~l 255 (256)
T cd05114 221 --YRPKLASMTVYEVMYSCWHEKPEGRPTFAELLRAI 255 (256)
T ss_pred --CCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHhh
Confidence 00111235678999999999999999999999886
No 66
>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an
Probab=100.00 E-value=2.6e-38 Score=334.10 Aligned_cols=268 Identities=22% Similarity=0.283 Sum_probs=202.1
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
.++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 4 ~~~y~~~~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e 83 (303)
T cd07869 4 ADSYEKLEKLGEGSYATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDIIHTKETLTLVFE 83 (303)
T ss_pred cccceEeeeEEecCCEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEEecCCeEEEEEE
Confidence 468999999999999999999975 78999999986543 2223456789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|++ +++.+++......+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 84 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~- 157 (303)
T cd07869 84 YVH-TDLCQYMDKHPGGLHPENVKLFLFQLLRGLSYIH----QRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPS- 157 (303)
T ss_pred CCC-cCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCC-
Confidence 995 6899988876666899999999999999999999 6789999999999999999999999999997543221
Q ss_pred cceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC---hhh-----
Q 003855 658 SVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG---LTE----- 728 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~~~----- 728 (791)
.......+++.|+|||++.+ ..++.++||||+||++|||++|+.||.+.......+........... ...
T Consensus 158 -~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (303)
T cd07869 158 -HTYSNEVVTLWYRPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWPGVHSLP 236 (303)
T ss_pred -ccCCCCcccCCCCChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhccchhhcc
Confidence 12233467899999998754 55889999999999999999999999764332222222111100000 000
Q ss_pred hcchh-h----hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 729 VVDAN-L----VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 729 ~~d~~-~----~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..++. . .............+..+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dp~~R~s~~~~l~ 287 (303)
T cd07869 237 HFKPERFTLYSPKNLRQAWNKLSYVNHAEDLASKLLQCFPKNRLSAQAALS 287 (303)
T ss_pred ccccccccccCCccHHHHhhccCCChHHHHHHHHHhccCchhccCHHHHhc
Confidence 00000 0 0000000011123356789999999999999999999985
No 67
>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.
Probab=100.00 E-value=2.6e-38 Score=338.62 Aligned_cols=252 Identities=23% Similarity=0.294 Sum_probs=203.8
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+..|+.++.+++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~ig~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~ 80 (333)
T cd05600 1 KDFQILTQVGQGGYGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAFQDDEYLYLAM 80 (333)
T ss_pred CCcEEEEEEeecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEEEcCCEEEEEE
Confidence 36889999999999999999976 68999999997653 234567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++....
T Consensus 81 e~~~g~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~-- 153 (333)
T cd05600 81 EYVPGGDFRTLLNNLG-VLSEDHARFYMAEMFEAVDALH----ELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVT-- 153 (333)
T ss_pred eCCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCCEEEEeCcCCccccc--
Confidence 9999999999997654 4788999999999999999999 67899999999999999999999999999986543
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC-Chhhhcchhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH-GLTEVVDANLV 735 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~d~~~~ 735 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.||......+ .... +...... ......++
T Consensus 154 ---~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~~~-~~~~-i~~~~~~~~~~~~~~~--- 225 (333)
T cd05600 154 ---YANSVVGSPDYMAPEVLRGKGYDFTVDYWSLGCMLYEFLCGFPPFSGSTPNE-TWEN-LKYWKETLQRPVYDDP--- 225 (333)
T ss_pred ---ccCCcccCccccChhHhcCCCCCCccceecchHHHhhhhhCCCCCCCCCHHH-HHHH-HHhccccccCCCCCcc---
Confidence 2223468999999999998899999999999999999999999997532211 1111 1110000 00000000
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
...++.++.+++.+|+..+|++||++.|+++.
T Consensus 226 --------~~~~s~~~~~li~~~l~~~~~rr~s~~~ll~h 257 (333)
T cd05600 226 --------RFNLSDEAWDLITKLINDPSRRFGSLEDIKNH 257 (333)
T ss_pred --------ccccCHHHHHHHHHHhhChhhhcCCHHHHHhC
Confidence 01345678899999999999999999999864
No 68
>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be
Probab=100.00 E-value=2.2e-38 Score=337.32 Aligned_cols=241 Identities=24% Similarity=0.271 Sum_probs=195.8
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNG 582 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 582 (791)
+.||+|+||.||+|+.. +|+.||+|++.... ......+..|+.++++++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~~~~ 80 (323)
T cd05571 1 KLLGKGTFGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999864 78999999997643 234456788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceee
Q 003855 583 SLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQT 662 (791)
Q Consensus 583 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 662 (791)
+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ....
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH----~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~--~~~~ 153 (323)
T cd05571 81 ELFFHLSRER-VFSEDRARFYGAEIVSALGYLH----SCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDG--ATMK 153 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCC--Cccc
Confidence 9999998654 4889999999999999999999 6789999999999999999999999999997542221 1223
Q ss_pred cccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhH
Q 003855 663 MTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFS 742 (791)
Q Consensus 663 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 742 (791)
..+||+.|+|||++.+..++.++||||+||++|||++|+.||..... ......+. .... .
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~Pf~~~~~--~~~~~~~~---~~~~---------------~ 213 (323)
T cd05571 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELIL---MEEI---------------R 213 (323)
T ss_pred ceecCccccChhhhcCCCCCccccCcccchhhhhhhcCCCCCCCCCH--HHHHHHHH---cCCC---------------C
Confidence 34689999999999999999999999999999999999999965211 11111111 0000 0
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003855 743 AKMDCILSIMDLALDCCIESPDMRI-----NVTDAAA 774 (791)
Q Consensus 743 ~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~ 774 (791)
.+...+.++.+++.+||+.||++|| ++.++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~ll~ 250 (323)
T cd05571 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPEDAKEIME 250 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHHc
Confidence 0113456678999999999999999 7888865
No 69
>KOG0589 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.2e-39 Score=333.75 Aligned_cols=251 Identities=22% Similarity=0.295 Sum_probs=212.9
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCe-eeEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDF-KALV 575 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~-~~lv 575 (791)
.++|..++++|+|+||.++..+.+ ++..|++|.+.... ....+...+|+.++++++|||||.+.+.|.+.+. .++|
T Consensus 3 m~~Ye~~~~iG~GafG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~~~~~~~l~Iv 82 (426)
T KOG0589|consen 3 MDNYEVLRQVGRGAFGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSFEEDGQLLCIV 82 (426)
T ss_pred cchhhhhhhcCccccchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccchhcCCceEEEE
Confidence 467899999999999999998865 67899999886543 3445578899999999999999999999988888 9999
Q ss_pred EecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 576 LEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
|+|++||++.+.+.+.+ ..+++..+.+++.|++.|+.||| +..|+|||||+.|||++.++.|||+|||+|+.+.+
T Consensus 83 m~Y~eGg~l~~~i~~~k~~~f~E~~i~~~~~Q~~~av~ylH----~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~ 158 (426)
T KOG0589|consen 83 MEYCEGGDLAQLIKEQKGVLFPEERILKWFVQILLAVNYLH----ENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNP 158 (426)
T ss_pred EeecCCCCHHHHHHHHhhccccHHHHHHHHHHHHHHHHHHH----hhhhhcccchhhhhhccccCceeecchhhhhhcCC
Confidence 99999999999998654 67899999999999999999999 67899999999999999999999999999999876
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
.. ......+||+.||.||.+.+..|..|+||||+||++|||++-+++|.... ....+....+..
T Consensus 159 ~~--~~a~tvvGTp~YmcPEil~d~pYn~KSDiWsLGC~~yEm~~lk~aF~a~~-----m~~Li~ki~~~~--------- 222 (426)
T KOG0589|consen 159 ED--SLASTVVGTPYYMCPEILSDIPYNEKSDIWSLGCCLYEMCTLKPAFKASN-----MSELILKINRGL--------- 222 (426)
T ss_pred ch--hhhheecCCCcccCHHHhCCCCCCccCcchhhcchHHHHHhcccccCccc-----hHHHHHHHhhcc---------
Confidence 54 23344689999999999999999999999999999999999999997632 222222111111
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..+.+..++.++..++..|+..+|+.||++.+++..
T Consensus 223 -----~~Plp~~ys~el~~lv~~~l~~~P~~RPsa~~LL~~ 258 (426)
T KOG0589|consen 223 -----YSPLPSMYSSELRSLVKSMLRKNPEHRPSALELLRR 258 (426)
T ss_pred -----CCCCCccccHHHHHHHHHHhhcCCccCCCHHHHhhC
Confidence 123344567888999999999999999999999987
No 70
>KOG0585 consensus Ca2+/calmodulin-dependent protein kinase kinase beta and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=8.4e-39 Score=323.28 Aligned_cols=255 Identities=27% Similarity=0.399 Sum_probs=198.9
Q ss_pred HHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh--------------HHHHHHHHHHHHHHhccCCcccee
Q 003855 498 RATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE--------------RAFRSFDSECEVLRNVRHRNLIKI 562 (791)
Q Consensus 498 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--------------~~~~~~~~e~~~l~~l~h~niv~l 562 (791)
+..++|++.+.||+|.||.|-+|+.. +++.||||++.+... ...+...+|+.+|++++|||||++
T Consensus 94 k~lNqy~l~~eiG~G~yGkVkLar~~~~~~l~AiKil~K~~~~~~~~~~~~~a~~~~~~ekv~~EIailKkl~H~nVV~L 173 (576)
T KOG0585|consen 94 KQLNQYELIKEIGSGQYGKVKLARDEVDGKLYAIKILPKKELRRQYGFPRQPAMKLMPIEKVRREIAILKKLHHPNVVKL 173 (576)
T ss_pred eehhheehhhhhcCCccceEEEEeecCCCcEEEEEeechhhhhhhcccccccccccCcHHHHHHHHHHHHhcCCcCeeEE
Confidence 34578999999999999999999964 799999999965421 113578899999999999999999
Q ss_pred eeeeccC--CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCc
Q 003855 563 LSSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMA 640 (791)
Q Consensus 563 ~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~ 640 (791)
+++..++ +..|||+|||..|.+.. .......+...+.++++.++..||+||| ..+|+||||||+|+|++++|+
T Consensus 174 iEvLDDP~s~~~YlVley~s~G~v~w-~p~d~~els~~~Ar~ylrDvv~GLEYLH----~QgiiHRDIKPsNLLl~~~g~ 248 (576)
T KOG0585|consen 174 IEVLDDPESDKLYLVLEYCSKGEVKW-CPPDKPELSEQQARKYLRDVVLGLEYLH----YQGIIHRDIKPSNLLLSSDGT 248 (576)
T ss_pred EEeecCcccCceEEEEEeccCCcccc-CCCCcccccHHHHHHHHHHHHHHHHHHH----hcCeeccccchhheEEcCCCc
Confidence 9999765 67899999999988754 2222223889999999999999999999 678999999999999999999
Q ss_pred EEEeeeccccccCCCCC---cceeecccccccccCCCccCCCC----CCccccHHhHHHHHHHHHhCCCCCCccccCcch
Q 003855 641 AHVSDFGISKLLGEGED---SVTQTMTMATIGYMAPEYGSEGI----VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMS 713 (791)
Q Consensus 641 ~kl~Dfgla~~~~~~~~---~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~ 713 (791)
|||+|||.+.....+.. .......+||+.|+|||...++. .+.+.||||+||++|.|+.|+.||-+.+ +..
T Consensus 249 VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF~APE~c~~~~~~~~~g~a~DiWalGVTLYCllfG~~PF~~~~--~~~ 326 (576)
T KOG0585|consen 249 VKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAFFAPELCSGGNSFSYSGFALDIWALGVTLYCLLFGQLPFFDDF--ELE 326 (576)
T ss_pred EEeeccceeeecccCCccccHHHHhhcCCCccccchHhhcCCCCccccchhhhhhhhhhhHHHhhhccCCcccch--HHH
Confidence 99999999987633211 12223368999999999776632 4568999999999999999999996522 111
Q ss_pred HHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 714 LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
+.+- ++. +.-.++...+..+.+.++|.++|.+||+.|.+..+|...
T Consensus 327 l~~K-----------Ivn-----~pL~fP~~pe~~e~~kDli~~lL~KdP~~Ri~l~~ik~H 372 (576)
T KOG0585|consen 327 LFDK-----------IVN-----DPLEFPENPEINEDLKDLIKRLLEKDPEQRITLPDIKLH 372 (576)
T ss_pred HHHH-----------Hhc-----CcccCCCcccccHHHHHHHHHHhhcChhheeehhhheec
Confidence 1111 111 111122222455778899999999999999999998754
No 71
>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament
Probab=100.00 E-value=4.6e-38 Score=329.55 Aligned_cols=265 Identities=21% Similarity=0.282 Sum_probs=201.4
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|+..+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~ 84 (288)
T cd07871 5 ETYVKLDKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDIIHTERCLTLVFEY 84 (288)
T ss_pred ccceEeeEEecCCCEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEEcCCCeEEEEEeC
Confidence 57899999999999999999865 78999999986443 22345677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++ |+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~- 158 (288)
T cd07871 85 LD-SDLKQYLDNCGNLMSMHNVKIFMFQLLRGLSYCH----KRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTK- 158 (288)
T ss_pred CC-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCc-
Confidence 97 4999999876666889999999999999999999 67899999999999999999999999999976533221
Q ss_pred ceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc---CCChhhh-----
Q 003855 659 VTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL---PHGLTEV----- 729 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~~~----- 729 (791)
......+++.|+|||++.+ ..++.++||||+||++|||+||+.||......+ .+........ ......+
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (288)
T cd07871 159 -TYSNEVVTLWYRPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKE-ELHLIFRLLGTPTEETWPGITSNEE 236 (288)
T ss_pred -cccCceecccccChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCChHHhhccccchh
Confidence 2233467899999998765 568999999999999999999999997532211 1111111100 0001110
Q ss_pred ----cchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 730 ----VDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 730 ----~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+...... ........+.++.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~-~~~~~~~~~~~~~dll~~mL~~dp~~R~t~~~~l~ 284 (288)
T cd07871 237 FRSYLFPQYRAQP-LINHAPRLDTDGIDLLSSLLLYETKSRISAEAALR 284 (288)
T ss_pred hhccccCccCCCc-hHHhCCCCCHHHHHHHHHhcCcCcccCCCHHHHhc
Confidence 000000000 00011123466789999999999999999999975
No 72
>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes. Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular
Probab=100.00 E-value=5.3e-38 Score=322.71 Aligned_cols=248 Identities=26% Similarity=0.441 Sum_probs=199.2
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCH
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSL 584 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 584 (791)
+.||+|+||.||+|+.. +++.||+|.+.... .+....+.+|++++++++||||+++++++......++||||+++++|
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (252)
T cd05084 1 ERIGRGNFGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDF 80 (252)
T ss_pred CccCcccCccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEcCCCCeEEEEeeccCCcH
Confidence 36999999999999875 78999999876433 34456788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecc
Q 003855 585 EKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMT 664 (791)
Q Consensus 585 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 664 (791)
.+++......+++..+..++.|++.||+||| +.+++||||||+||+++.++.+|++|||++...............
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 156 (252)
T cd05084 81 LTFLRTEGPRLKVKELIQMVENAAAGMEYLE----SKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMK 156 (252)
T ss_pred HHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCC
Confidence 9999876666899999999999999999999 678999999999999999999999999999765432211111112
Q ss_pred cccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHH
Q 003855 665 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSA 743 (791)
Q Consensus 665 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 743 (791)
..+..|+|||.+.++.++.++|||||||++|||++ |..||...... .....+....+ .+.
T Consensus 157 ~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~--~~~~~~~~~~~-----------------~~~ 217 (252)
T cd05084 157 QIPVKWTAPEALNYGRYSSESDVWSFGILLWEAFSLGAVPYANLSNQ--QTREAIEQGVR-----------------LPC 217 (252)
T ss_pred CCceeecCchhhcCCCCChHHHHHHHHHHHHHHHhCCCCCccccCHH--HHHHHHHcCCC-----------------CCC
Confidence 23567999999988889999999999999999998 88888653221 11111111000 011
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 744 KMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 744 ~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
+..++..+.+++.+|++.+|++||++.|+.++|.
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 251 (252)
T cd05084 218 PELCPDAVYRLMERCWEYDPGQRPSFSTVHQELQ 251 (252)
T ss_pred cccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHh
Confidence 1234567889999999999999999999999885
No 73
>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n
Probab=100.00 E-value=5.4e-38 Score=329.78 Aligned_cols=259 Identities=28% Similarity=0.435 Sum_probs=210.2
Q ss_pred hccccccccCCCcceEEEEEEec------CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
.+|...+.||+|+||.||+|+.. ++..+++|.+........+.+.+|++++++++||||+++++++...+..++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (291)
T cd05094 5 RDIVLKRELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIM 84 (291)
T ss_pred HHeEEeeeecccCCCeEEEeEeeccCCCCcceeeEEEecCCccHHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCceEE
Confidence 46888899999999999999742 356699999876655556778999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC
Q 003855 575 VLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM 639 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~ 639 (791)
||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||+++.++
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~Nil~~~~~ 160 (291)
T cd05094 85 VFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLA----SQHFVHRDLATRNCLVGANL 160 (291)
T ss_pred EEecCCCCcHHHHHHhcCcccccccccccccCcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccCcceEEEccCC
Confidence 999999999999997532 23789999999999999999999 77899999999999999999
Q ss_pred cEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHH
Q 003855 640 AAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWV 718 (791)
Q Consensus 640 ~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~ 718 (791)
.++|+|||+++...............++..|+|||+..+..++.++|||||||++|||+| |+.||......+ ..+.+
T Consensus 161 ~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~~~--~~~~~ 238 (291)
T cd05094 161 LVKIGDFGMSRDVYSTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--VIECI 238 (291)
T ss_pred cEEECCCCcccccCCCceeecCCCCCcceeecChHHhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHH
Confidence 999999999986644332222333456788999999988899999999999999999999 999986532211 11111
Q ss_pred HHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 719 KESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 719 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
.. ..... ....++..+.+++.+||+.+|++||++.+|+++|+++.+.
T Consensus 239 ~~---~~~~~--------------~~~~~~~~~~~li~~~l~~~P~~Rpt~~~v~~~l~~~~~~ 285 (291)
T cd05094 239 TQ---GRVLE--------------RPRVCPKEVYDIMLGCWQREPQQRLNIKEIYKILHALGKA 285 (291)
T ss_pred hC---CCCCC--------------CCccCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHhh
Confidence 11 00000 0112456688999999999999999999999999999664
No 74
>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt
Probab=100.00 E-value=4.1e-38 Score=329.05 Aligned_cols=254 Identities=30% Similarity=0.481 Sum_probs=205.9
Q ss_pred hccccccccCCCcceEEEEEEec------CCcEEEEEEeehhhhH-HHHHHHHHHHHHHhccCCccceeeeeeccCCeee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQLER-AFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 573 (791)
++|.+.+.||+|+||.||+|... +++.||||++...... ..+.+.+|+++++.++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~ 84 (280)
T cd05049 5 DTIVLKRELGEGAFGKVFLGECYHLEPENDKELVAVKTLKETASNDARKDFEREAELLTNFQHENIVKFYGVCTEGDPPI 84 (280)
T ss_pred HHhhHHhhccccCCceEeeeeeccccCcCCcceEEEEeecccCCHHHHHHHHHHHHHHHhcCCCCchheeeEEecCCCeE
Confidence 56888899999999999999863 3478999998765433 4578999999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCC-------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCc
Q 003855 574 LVLEFMPNGSLEKWLYSHN-------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMA 640 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~-------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~ 640 (791)
+||||+++|+|.+++...+ ..+++..+..++.|++.|+.||| ..+++||||||+||+++.++.
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH----~~~i~h~dlkp~nili~~~~~ 160 (280)
T cd05049 85 MVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLSQLLQIAVQIASGMVYLA----SQHFVHRDLATRNCLVGYDLV 160 (280)
T ss_pred EEEecCCCCCHHHHHHhcCCchhhhcccccccccccHHHHHHHHHHHHHHHHHHh----hCCeeccccccceEEEcCCCe
Confidence 9999999999999997542 34788899999999999999999 678999999999999999999
Q ss_pred EEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHH
Q 003855 641 AHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVK 719 (791)
Q Consensus 641 ~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 719 (791)
+||+|||+++...............+++.|+|||++.++.++.++|||||||++|||++ |+.||...... ...+.+.
T Consensus 161 ~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~e~~~~g~~p~~~~~~~--~~~~~~~ 238 (280)
T cd05049 161 VKIGDFGMSRDVYTTDYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVVLWEIFTYGKQPWYGLSNE--EVIECIT 238 (280)
T ss_pred EEECCcccceecccCcceecCCCCcccceecChhhhccCCcchhhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHH
Confidence 99999999986543332222233446788999999999999999999999999999998 99998653221 1111111
Q ss_pred HhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 720 ESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 720 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
. .... ..+..++..+.+++.+||+.||++||++.||++.|+
T Consensus 239 ~---~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~~l~ 279 (280)
T cd05049 239 Q---GRLL--------------QRPRTCPSEVYDIMLGCWKRDPQQRINIKDIHERLQ 279 (280)
T ss_pred c---CCcC--------------CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhh
Confidence 0 0000 001134567889999999999999999999999886
No 75
>KOG0610 consensus Putative serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=5.3e-38 Score=313.30 Aligned_cols=253 Identities=24% Similarity=0.327 Sum_probs=207.5
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
.+.|+..+.||+|.-|+||.++.+ ++..+|+|++.+.. ++.....+.|.++|+.++||.++.+++.++.+...|+|
T Consensus 76 l~~f~llk~LG~GdiG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~fet~~~~cl~ 155 (459)
T KOG0610|consen 76 LRHFRLLKRLGCGDIGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASFETDKYSCLV 155 (459)
T ss_pred HHHHHHHHHcCCCCceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhheeeccceeEEE
Confidence 457888899999999999999986 45889999998764 44456778899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 576 LEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||+||+|....+++ +..+++..+.-++..|+-||+||| ..|||+|||||+||||-++|++-|+||.++.....
T Consensus 156 meyCpGGdL~~LrqkQp~~~fse~~aRFYaAEvl~ALEYLH----mlGivYRDLKPENILvredGHIMLsDFDLS~~~~~ 231 (459)
T KOG0610|consen 156 MEYCPGGDLHSLRQKQPGKRFSESAARFYAAEVLLALEYLH----MLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPV 231 (459)
T ss_pred EecCCCccHHHHHhhCCCCccchhhHHHHHHHHHHHHHHHH----hhceeeccCCcceeEEecCCcEEeeeccccccCCC
Confidence 9999999999999865 456899999999999999999999 78999999999999999999999999999853210
Q ss_pred ---------------------------------CCC---------------------cceeecccccccccCCCccCCCC
Q 003855 655 ---------------------------------GED---------------------SVTQTMTMATIGYMAPEYGSEGI 680 (791)
Q Consensus 655 ---------------------------------~~~---------------------~~~~~~~~g~~~y~aPE~~~~~~ 680 (791)
... .......+||-.|+|||++.+..
T Consensus 232 ~Pt~~~s~~~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEYlAPEvI~G~G 311 (459)
T KOG0610|consen 232 SPTLVKSSSPRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEYLAPEVIRGEG 311 (459)
T ss_pred CCeeeccCCCCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCccccccccccccccceeeecCC
Confidence 000 01122347999999999999999
Q ss_pred CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccc
Q 003855 681 VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCI 760 (791)
Q Consensus 681 ~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~ 760 (791)
.+.++|+|+|||++|||+.|..||.+.... ..+...+ .+.+ .++.....+..+.+||++.|.
T Consensus 312 HgsAVDWWtfGIflYEmLyG~TPFKG~~~~-~Tl~NIv------------~~~l-----~Fp~~~~vs~~akDLIr~LLv 373 (459)
T KOG0610|consen 312 HGSAVDWWTFGIFLYEMLYGTTPFKGSNNK-ETLRNIV------------GQPL-----KFPEEPEVSSAAKDLIRKLLV 373 (459)
T ss_pred CCchhhHHHHHHHHHHHHhCCCCcCCCCch-hhHHHHh------------cCCC-----cCCCCCcchhHHHHHHHHHhc
Confidence 999999999999999999999999885433 2333222 2111 222222455678899999999
Q ss_pred cCCCCCCC----HHHHHH
Q 003855 761 ESPDMRIN----VTDAAA 774 (791)
Q Consensus 761 ~~P~~RPt----~~ev~~ 774 (791)
+||++|.. +.||.+
T Consensus 374 KdP~kRlg~~rGA~eIK~ 391 (459)
T KOG0610|consen 374 KDPSKRLGSKRGAAEIKR 391 (459)
T ss_pred cChhhhhccccchHHhhc
Confidence 99999998 777654
No 76
>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes
Probab=100.00 E-value=3.8e-38 Score=330.45 Aligned_cols=267 Identities=21% Similarity=0.220 Sum_probs=201.5
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
++|++.+.||+|+||.||+|+.+ +++.||||++.... ....+.+.+|+.++++++||||+++++++...+..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (287)
T cd07848 1 NKFEVLGVVGEGAYGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAFRRRGKLYLVFE 80 (287)
T ss_pred CCceEEEEecccCCEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhEecCCEEEEEEe
Confidence 46889999999999999999975 68899999987542 2335677889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|++++.+..+. .....+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~~~~~l~~~~-~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~ 155 (287)
T cd07848 81 YVEKNMLELLE-EMPNGVPPEKVRSYIYQLIKAIHWCH----KNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSN 155 (287)
T ss_pred cCCCCHHHHHH-hcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEEeeccCccccccccc
Confidence 99987666544 33445899999999999999999999 67899999999999999999999999999987643221
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHH--hcCCC-h--------
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKE--SLPHG-L-------- 726 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~--~~~~~-~-------- 726 (791)
.......|+..|+|||++.+..++.++|||||||++|||++|+.||......+. ....... ..+.. .
T Consensus 156 -~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07848 156 -ANYTEYVATRWYRSPELLLGAPYGKAVDMWSVGCILGELSDGQPLFPGESEIDQ-LFTIQKVLGPLPAEQMKLFYSNPR 233 (287)
T ss_pred -ccccccccccccCCcHHHcCCCCCCchhHHhHHHHHHHHHhCCCCCCCCCHHHH-HHHHHHhhCCCCHHHHHhhhccch
Confidence 122234689999999999888899999999999999999999999975322111 1110000 00000 0
Q ss_pred -hhhcchhhhh-hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 727 -TEVVDANLVR-EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 727 -~~~~d~~~~~-~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.....+.... ..........++..+.+++.+|++.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~s~~~~dll~~~L~~~P~~R~s~~~~l~ 283 (287)
T cd07848 234 FHGLRFPAVNHPQSLERRYLGILSGVLLDLMKNLLKLNPTDRYLTEQCLN 283 (287)
T ss_pred hcccccCcccCcccHHHhhhcccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000 00000011135667999999999999999999999875
No 77
>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn. Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa
Probab=100.00 E-value=5.2e-38 Score=324.59 Aligned_cols=255 Identities=22% Similarity=0.415 Sum_probs=207.5
Q ss_pred hhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.++|++.++||+|+||.||+|...+++.||+|.+.... ...+.+..|+.++++++||||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05072 5 RESIKLVKKLGAGQFGEVWMGYYNNSTKVAVKTLKPGT-MSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEPIYIITEYM 83 (261)
T ss_pred hHHeEEeeecCCcCCceEEEEEecCCceEEEEEccCCc-hhHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCCcEEEEecC
Confidence 46899999999999999999998888899999876543 23467889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++|+|.+++... ...+++..+..++.|++.|++||| +.+++||||||+||++++++.++|+|||+++........
T Consensus 84 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~ 159 (261)
T cd05072 84 AKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIE----RKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT 159 (261)
T ss_pred CCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhhEEecCCCcEEECCCccceecCCCcee
Confidence 999999999754 345888999999999999999999 678999999999999999999999999999876432211
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
......++..|+|||+...+.++.++|||||||++|||+| |+.||...... .....+.....
T Consensus 160 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~~--~~~~~~~~~~~-------------- 222 (261)
T cd05072 160 -AREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLYEIVTYGKIPYPGMSNS--DVMSALQRGYR-------------- 222 (261)
T ss_pred -ccCCCccceecCCHHHhccCCCChhhhhhhhHHHHHHHHccCCCCCCCCCHH--HHHHHHHcCCC--------------
Confidence 1122335678999999988889999999999999999998 99998653211 11121111100
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
.+....++.++.+++.+|++.+|++||++.++.+.|+.+
T Consensus 223 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 261 (261)
T cd05072 223 ---MPRMENCPDELYDIMKTCWKEKAEERPTFDYLQSVLDDF 261 (261)
T ss_pred ---CCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHhcC
Confidence 011113456678999999999999999999999999753
No 78
>KOG0594 consensus Protein kinase PCTAIRE and related kinases [General function prediction only]
Probab=100.00 E-value=3.4e-38 Score=312.91 Aligned_cols=267 Identities=25% Similarity=0.307 Sum_probs=204.0
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh--HHHHHHHHHHHHHHhccCCc-cceeeeeeccCC-----
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE--RAFRSFDSECEVLRNVRHRN-LIKILSSCSNPD----- 570 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~n-iv~l~~~~~~~~----- 570 (791)
...|..+++||+|+||+||+|+.+ +|+.||+|.+....+ .......+|+.++++++|+| |+.+++++.+.+
T Consensus 10 ~~~~~~~eklGeGtyg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~~~~~ 89 (323)
T KOG0594|consen 10 MFDYEKVEKLGEGTYGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNNHRGI 89 (323)
T ss_pred HHHHHHHHHhCCCCceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccccccc
Confidence 566778889999999999999964 789999999876643 34456688999999999999 999999998776
Q ss_pred -eeeEEEecCCCCCHHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeee
Q 003855 571 -FKALVLEFMPNGSLEKWLYSHN---YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDF 646 (791)
Q Consensus 571 -~~~lv~e~~~~g~L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 646 (791)
..++||||++. +|.+++.... ..++...+..+++||++||+||| +++|+||||||.||+++++|.+||+||
T Consensus 90 ~~l~lvfe~~d~-DL~~ymd~~~~~~~g~~~~~ik~~m~Qll~gl~~~H----~~~IlHRDLKPQNlLi~~~G~lKlaDF 164 (323)
T KOG0594|consen 90 GKLYLVFEFLDR-DLKKYMDSLPKKPQGLPPRLIKSFMRQLLRGLAFLH----SHGILHRDLKPQNLLISSSGVLKLADF 164 (323)
T ss_pred ceEEEEEEeecc-cHHHHHHhccccccCCCHHHHHHHHHHHHHHHHHHH----hCCeecccCCcceEEECCCCcEeeecc
Confidence 78899999965 9999999655 35777899999999999999999 789999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc--C
Q 003855 647 GISKLLGEGEDSVTQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL--P 723 (791)
Q Consensus 647 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~--~ 723 (791)
|+|+.+.-.. ...+..++|.+|+|||++.+. .|+...||||+|||++||++++.-|.+..+. ..+.+ +-... +
T Consensus 165 GlAra~~ip~--~~yt~evvTlWYRaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~-~ql~~-If~~lGtP 240 (323)
T KOG0594|consen 165 GLARAFSIPM--RTYTPEVVTLWYRAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEI-DQLFR-IFRLLGTP 240 (323)
T ss_pred chHHHhcCCc--ccccccEEEeeccCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHH-HHHHH-HHHHcCCC
Confidence 9999765222 235567899999999987765 7999999999999999999999887764331 11111 11111 0
Q ss_pred --CChhh---hcchh--hhhhHHhhHHHH---HHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 724 --HGLTE---VVDAN--LVREEQAFSAKM---DCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 724 --~~~~~---~~d~~--~~~~~~~~~~~~---~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
+.+.. ..+.. +.......+... .......+++.+|++.+|.+|.+++.+++.
T Consensus 241 ~e~~Wp~v~~~~~~k~~f~~~~~~~~l~~~~~~~~~~~~dll~~~L~y~p~~R~Sa~~al~h 302 (323)
T KOG0594|consen 241 NEKDWPGVSSLPDYKAPFPKWPGPKDLSSILPKLDPDGIELLSKLLQYDPAKRISAKGALTH 302 (323)
T ss_pred CccCCCCccccccccccCcCCCCccchHHhccccCccHHHHHHHHhccCcccCcCHHHHhcC
Confidence 11111 11111 100000000000 111367799999999999999999999885
No 79
>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk. Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom
Probab=100.00 E-value=3.1e-38 Score=326.28 Aligned_cols=256 Identities=29% Similarity=0.483 Sum_probs=211.2
Q ss_pred HhhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
...+|+..+.||+|+||.||+|...+++.+|+|++..........+..|+.+++.++||||+++++++.+.+..++||||
T Consensus 4 ~~~~y~~~~~ig~g~~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 83 (261)
T cd05148 4 PREEFTLERKLGSGYFGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVCSVGEPVYIITEL 83 (261)
T ss_pred cHHHHHHhhhhccCCCccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeEecCCCeEEEEee
Confidence 45678999999999999999999888999999998876655567788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+++|+|.+++... ...+++..+..++.|++.|+.||| ..+++||||+|+||++++++.+||+|||.+........
T Consensus 84 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~ 159 (261)
T cd05148 84 MEKGSLLAFLRSPEGQVLPVASLIDMACQVAEGMAYLE----EQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVY 159 (261)
T ss_pred cccCCHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccCcceEEEcCCceEEEccccchhhcCCccc
Confidence 9999999999864 345899999999999999999999 67899999999999999999999999999987643221
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
. .....++..|+|||......++.++||||||+++|+|++ |+.||...... ...+.+.....
T Consensus 160 ~--~~~~~~~~~~~~PE~~~~~~~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~------------- 222 (261)
T cd05148 160 L--SSDKKIPYKWTAPEAASHGTFSTKSDVWSFGILLYEMFTYGQVPYPGMNNH--EVYDQITAGYR------------- 222 (261)
T ss_pred c--ccCCCCceEecCHHHHccCCCCchhhHHHHHHHHHHHHcCCCCCCCcCCHH--HHHHHHHhCCc-------------
Confidence 1 112345678999999988889999999999999999998 89998653211 11111111000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
.+.+..++..+.+++.+||+.+|++|||+.++.+.|+.+
T Consensus 223 ----~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~l~~~L~~~ 261 (261)
T cd05148 223 ----MPCPAKCPQEIYKIMLECWAAEPEDRPSFKALREELDNI 261 (261)
T ss_pred ----CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHhcC
Confidence 011124456788999999999999999999999999753
No 80
>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor. Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh
Probab=100.00 E-value=4e-38 Score=328.36 Aligned_cols=256 Identities=25% Similarity=0.431 Sum_probs=203.7
Q ss_pred HhhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCe
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDF 571 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 571 (791)
..++|+..+.||+|+||.||+|... ++..||||++.... ......+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~ig~G~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~ 83 (277)
T cd05062 4 AREKITMSRELGQGSFGMVYEGIAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVVSQGQP 83 (277)
T ss_pred cHHHceeeeeeccccCCeEEEEEeccCCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999753 35679999886432 2344568899999999999999999999999999
Q ss_pred eeEEEecCCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEE
Q 003855 572 KALVLEFMPNGSLEKWLYSHN---------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAH 642 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~k 642 (791)
.++||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.++
T Consensus 84 ~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~vH~dlkp~Nil~~~~~~~~ 159 (277)
T cd05062 84 TLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMIQMAGEIADGMAYLN----ANKFVHRDLAARNCMVAEDFTVK 159 (277)
T ss_pred eEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCcchheEEEcCCCCEE
Confidence 999999999999999997532 23578889999999999999999 67899999999999999999999
Q ss_pred EeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHh
Q 003855 643 VSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKES 721 (791)
Q Consensus 643 l~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 721 (791)
++|||+++...............++..|+|||++.++.++.++|||||||++|||++ |..||.+... ....+++..
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~p~~~~~~--~~~~~~~~~- 236 (277)
T cd05062 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGMSN--EQVLRFVME- 236 (277)
T ss_pred ECCCCCccccCCcceeecCCCCccCHhhcChhHhhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHc-
Confidence 999999986544332222222345788999999988899999999999999999999 6888865321 111111111
Q ss_pred cCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 722 LPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 722 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
.... ..+..++..+.+++.+|++.+|++||++.|+++.|+
T Consensus 237 --~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~e~l~~l~ 276 (277)
T cd05062 237 --GGLL--------------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSIK 276 (277)
T ss_pred --CCcC--------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHhh
Confidence 0000 001134567889999999999999999999999876
No 81
>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1. Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst
Probab=100.00 E-value=1.2e-37 Score=332.94 Aligned_cols=199 Identities=26% Similarity=0.357 Sum_probs=174.7
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
.++|++.+.||+|+||.||+|... ++..+|+|++.... ......+.+|++++++++||||+++++++.+.+..++|||
T Consensus 4 ~~~y~~~~~lg~g~~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 83 (333)
T cd06650 4 DDDFEKISELGAGNGGVVFKVSHKPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYSDGEISICME 83 (333)
T ss_pred hhhhheeccccCCCCEEEEEEEECCCCcEEEEEEeecccCHHHHHHHHHHHHHHHHCCCCcccceeEEEEECCEEEEEEe
Confidence 368999999999999999999976 68899999887543 3345678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|+++|+|.+++.... .+++..+..++.+++.|+.|||+ ..+|+||||||+||++++++.+||+|||++..+....
T Consensus 84 ~~~~~~L~~~l~~~~-~~~~~~~~~~~~~l~~~l~~lH~---~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~- 158 (333)
T cd06650 84 HMDGGSLDQVLKKAG-RIPEQILGKVSIAVIKGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM- 158 (333)
T ss_pred cCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh---cCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhc-
Confidence 999999999998654 37889999999999999999993 2469999999999999999999999999997653321
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCc
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 706 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~ 706 (791)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||..
T Consensus 159 ---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~ 204 (333)
T cd06650 159 ---ANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAIGRYPIPP 204 (333)
T ss_pred ---cccCCCCccccCHHHhcCCCCCcHHHHHHHHHHHHHHHHCCCCCCC
Confidence 1234688999999999888899999999999999999999999875
No 82
>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl
Probab=100.00 E-value=4.2e-38 Score=333.60 Aligned_cols=238 Identities=26% Similarity=0.282 Sum_probs=192.7
Q ss_pred cCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCH
Q 003855 509 LGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSL 584 (791)
Q Consensus 509 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 584 (791)
||+|+||.||+|+.. +++.||+|++.... ......+..|+.++++++||||+++++++.+++..++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g~L 80 (312)
T cd05585 1 IGKGSFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSFQSPEKLYLVLAFINGGEL 80 (312)
T ss_pred CCcCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEEecCCeEEEEEcCCCCCcH
Confidence 799999999999975 68899999987542 33456678899999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecc
Q 003855 585 EKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMT 664 (791)
Q Consensus 585 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 664 (791)
.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++....... .....
T Consensus 81 ~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~~~~ 153 (312)
T cd05585 81 FHHLQREG-RFDLSRARFYTAELLCALENLH----KFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDD--KTNTF 153 (312)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCC--ccccc
Confidence 99998654 3889999999999999999999 67899999999999999999999999999976432221 22334
Q ss_pred cccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHH
Q 003855 665 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAK 744 (791)
Q Consensus 665 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 744 (791)
.||+.|+|||++.+..++.++||||+||++|||++|+.||..... ............ ..+
T Consensus 154 ~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~tg~~pf~~~~~-----~~~~~~~~~~~~---------------~~~ 213 (312)
T cd05585 154 CGTPEYLAPELLLGHGYTKAVDWWTLGVLLYEMLTGLPPFYDENV-----NEMYRKILQEPL---------------RFP 213 (312)
T ss_pred cCCcccCCHHHHcCCCCCCccceechhHHHHHHHhCCCCcCCCCH-----HHHHHHHHcCCC---------------CCC
Confidence 689999999999999999999999999999999999999975211 111111111100 011
Q ss_pred HHHHHHHHHHHhhccccCCCCCCC---HHHHH
Q 003855 745 MDCILSIMDLALDCCIESPDMRIN---VTDAA 773 (791)
Q Consensus 745 ~~~~~~l~~li~~cl~~~P~~RPt---~~ev~ 773 (791)
..++..+.+++.+||+.||++||+ +.|++
T Consensus 214 ~~~~~~~~~li~~~L~~dp~~R~~~~~~~e~l 245 (312)
T cd05585 214 DGFDRDAKDLLIGLLSRDPTRRLGYNGAQEIK 245 (312)
T ss_pred CcCCHHHHHHHHHHcCCCHHHcCCCCCHHHHH
Confidence 134466789999999999999986 45554
No 83
>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a
Probab=100.00 E-value=8.6e-38 Score=322.89 Aligned_cols=255 Identities=28% Similarity=0.444 Sum_probs=206.4
Q ss_pred hhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.++|++.+.||+|+||.||+|..++++.||+|.+.... ...+.+.+|+.++++++||||+++++++...+..++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 83 (261)
T cd05068 5 RTSIQLLRKLGAGQFGEVWEGLWNNTTPVAVKTLKPGT-MDPKDFLAEAQIMKKLRHPKLIQLYAVCTLEEPIYIVTELM 83 (261)
T ss_pred hhheeeEEEecccCCccEEEEEecCCeEEEEEeeCCCc-ccHHHHHHHHHHHHHCCCCCccceeEEEecCCCeeeeeecc
Confidence 46788999999999999999998888899999986543 23456888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++++|.+++.... ..+++..+..++.|++.|+.||| +.+++||||||+||++++++.++|+|||+++.......
T Consensus 84 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 158 (261)
T cd05068 84 KYGSLLEYLQGGAGRALKLPQLIDMAAQVASGMAYLE----AQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIY- 158 (261)
T ss_pred cCCcHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcc-
Confidence 9999999997643 45899999999999999999999 67899999999999999999999999999987653221
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
........+..|+|||+..+..++.++||||||+++|||+| |+.||...... .....+.....
T Consensus 159 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~~-------------- 222 (261)
T cd05068 159 EAREGAKFPIKWTAPEAALYNRFSIKSDVWSFGILLTEIVTYGRMPYPGMTNA--EVLQQVDQGYR-------------- 222 (261)
T ss_pred cccCCCcCceeccCccccccCCCCchhhHHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC--------------
Confidence 11111223457999999988899999999999999999999 99998653211 11111111000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
.+....++..+.+++.+|++.+|++||++.++.+.|+.+
T Consensus 223 ---~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~l~~~l~~~ 261 (261)
T cd05068 223 ---MPCPPGCPKELYDIMLDCWKEDPDDRPTFETLQWKLEDF 261 (261)
T ss_pred ---CCCCCcCCHHHHHHHHHHhhcCcccCCCHHHHHHHHhcC
Confidence 011123456788999999999999999999999999853
No 84
>PTZ00267 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7e-38 Score=349.89 Aligned_cols=250 Identities=23% Similarity=0.254 Sum_probs=203.2
Q ss_pred ccccccccCCCcceEEEEEEec-C-CcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-D-GTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.|.+.+.||+|+||.||+|... + ++.||+|.+..........+..|+.+++.++||||+++++++...+..++||||+
T Consensus 68 ~y~~~~~lg~G~~g~vy~a~~~~~~~~~vv~K~~~~~~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~~~~~~~~lv~E~~ 147 (478)
T PTZ00267 68 MYVLTTLVGRNPTTAAFVATRGSDPKEKVVAKFVMLNDERQAAYARSELHCLAACDHFGIVKHFDDFKSDDKLLLIMEYG 147 (478)
T ss_pred eEEEEEEEEeCCCcEEEEEEEcCCCCeEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEEECCEEEEEEECC
Confidence 4889999999999999999854 3 6788999776555555567788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 580 PNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 580 ~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
++|+|.+++.. ....+++.++..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 148 ~gg~L~~~l~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH----~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~ 223 (478)
T PTZ00267 148 SGGDLNKQIKQRLKEHLPFQEYEVGLLFYQIVLALDEVH----SRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSV 223 (478)
T ss_pred CCCCHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCcc
Confidence 99999998864 2345889999999999999999999 6789999999999999999999999999998765433
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
........+||++|+|||++.+..++.++|||||||++|||++|+.||..... ...+.........
T Consensus 224 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~tg~~Pf~~~~~-----~~~~~~~~~~~~~--------- 289 (478)
T PTZ00267 224 SLDVASSFCGTPYYLAPELWERKRYSKKADMWSLGVILYELLTLHRPFKGPSQ-----REIMQQVLYGKYD--------- 289 (478)
T ss_pred ccccccccCCCccccCHhHhCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCCH-----HHHHHHHHhCCCC---------
Confidence 22223345689999999999999999999999999999999999999965221 1111111000000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.+..++.++.+++.+||+.||++||++.+++.
T Consensus 290 -----~~~~~~s~~~~~li~~~L~~dP~~Rps~~~~l~ 322 (478)
T PTZ00267 290 -----PFPCPVSSGMKALLDPLLSKNPALRPTTQQLLH 322 (478)
T ss_pred -----CCCccCCHHHHHHHHHHhccChhhCcCHHHHHh
Confidence 011134566889999999999999999999864
No 85
>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th
Probab=100.00 E-value=1e-37 Score=326.67 Aligned_cols=269 Identities=26% Similarity=0.414 Sum_probs=206.3
Q ss_pred hccccccccCCCcceEEEEEEec-----CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeecc--CCeee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-----DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSN--PDFKA 573 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~ 573 (791)
.+|+..+.||+|+||.||+|..+ +++.||+|.+........+.+.+|++++++++||||+++++++.. ....+
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 83 (284)
T cd05081 4 RHLKFIQQLGKGNFGSVELCRYDPLQDNTGEVVAVKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLR 83 (284)
T ss_pred ccceeeeeccCCCCceEEEEEecCCcCCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEccCCCCceE
Confidence 46888899999999999999742 578999999876666667788999999999999999999998743 35678
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
+||||+++|+|.+++......+++..+..++.|++.||+||| ..+++||||||+||++++++.+||+|||+++...
T Consensus 84 lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~aL~~LH----~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~ 159 (284)
T cd05081 84 LVMEYLPYGSLRDYLQKHRERLDHRKLLLYASQICKGMEYLG----SKRYVHRDLATRNILVESENRVKIGDFGLTKVLP 159 (284)
T ss_pred EEEEecCCCCHHHHHHhcCcCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCCHhhEEECCCCeEEECCCccccccc
Confidence 999999999999999876556899999999999999999999 6789999999999999999999999999998765
Q ss_pred CCCCccee-ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcch
Q 003855 654 EGEDSVTQ-TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 654 ~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
........ ....++..|+|||+..+..++.++|||||||++|||++|..|+..... .+...............
T Consensus 160 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~ 233 (284)
T cd05081 160 QDKEYYKVREPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYSDKSCSPPA------EFMRMMGNDKQGQMIVY 233 (284)
T ss_pred CCCcceeecCCCCCceEeeCHHHhccCCcChHHHHHHHHHHHHHHhhcCCcCCCcch------hhhhhcccccccccchH
Confidence 43322111 112234569999999888899999999999999999998876543211 11111000000000000
Q ss_pred hh---hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 733 NL---VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 733 ~~---~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
.+ .......+....++.++.+++.+||+.+|++|||+.|+++.|+.+
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~~ 283 (284)
T cd05081 234 HLIELLKNNGRLPAPPGCPAEIYAIMKECWNNDPSQRPSFSELALQVEAI 283 (284)
T ss_pred HHHHHHhcCCcCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHHhc
Confidence 00 000111112234567789999999999999999999999999876
No 86
>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional
Probab=100.00 E-value=4e-38 Score=336.53 Aligned_cols=246 Identities=23% Similarity=0.254 Sum_probs=200.0
Q ss_pred hhccccccccCCCcceEEEEEEecC--CcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISD--GTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
.++|++.+.||+|+||.||+|+.+. +..||+|++.... ....+.+..|+.+++.++||||+++++++.+.+..++
T Consensus 29 ~~~y~~~~~ig~G~~g~Vy~a~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~l 108 (340)
T PTZ00426 29 YEDFNFIRTLGTGSFGRVILATYKNEDFPPVAIKRFEKSKIIKQKQVDHVFSERKILNYINHPFCVNLYGSFKDESYLYL 108 (340)
T ss_pred hhhcEEEEEEeecCCeEEEEEEEECCCCeEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCCcceEEEEEeCCEEEE
Confidence 4679999999999999999998643 3689999986543 2345678889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||+++|+|.+++..... +++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++....
T Consensus 109 v~Ey~~~g~L~~~i~~~~~-~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~ 183 (340)
T PTZ00426 109 VLEFVIGGEFFTFLRRNKR-FPNDVGCFYAAQIVLIFEYLQ----SLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDT 183 (340)
T ss_pred EEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----HCCeEccCCCHHHEEECCCCCEEEecCCCCeecCC
Confidence 9999999999999986653 889999999999999999999 77899999999999999999999999999987543
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
. .....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..... ......
T Consensus 184 ~-----~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~~~-~~~~~----i~~~~~-------- 245 (340)
T PTZ00426 184 R-----TYTLCGTPEYIAPEILLNVGHGKAADWWTLGIFIYEILVGCPPFYANEPL-LIYQK----ILEGII-------- 245 (340)
T ss_pred C-----cceecCChhhcCHHHHhCCCCCccccccchhhHHHHHhcCCCCCCCCCHH-HHHHH----HhcCCC--------
Confidence 2 12346899999999998888999999999999999999999999753211 00111 000000
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRI-----NVTDAAAK 775 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~~ 775 (791)
. .+...+..+.+++.+|++.||++|+ +++|+++.
T Consensus 246 -----~--~p~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~~~h 284 (340)
T PTZ00426 246 -----Y--FPKFLDNNCKHLMKKLLSHDLTKRYGNLKKGAQNVKEH 284 (340)
T ss_pred -----C--CCCCCCHHHHHHHHHHcccCHHHcCCCCCCCHHHHHcC
Confidence 0 0112335567999999999999995 78887653
No 87
>KOG0658 consensus Glycogen synthase kinase-3 [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.2e-39 Score=315.73 Aligned_cols=262 Identities=26% Similarity=0.330 Sum_probs=196.2
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccC---C--eee
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNP---D--FKA 573 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---~--~~~ 573 (791)
+-.|...+.+|.|+||.||+|... +++.||||....+.+ ---.|..+|+.++|||||++..+|... + ...
T Consensus 23 ~i~~~~~~liG~GsFg~Vyq~~~~e~~~~vAIKKv~~d~r----~knrEl~im~~l~HpNIV~L~~~f~~~~~~d~~~ln 98 (364)
T KOG0658|consen 23 EISYEAVRLIGSGSFGVVYQAKLRETEEEVAIKKVLQDKR----YKNRELQIMRKLDHPNIVRLLYFFSSSTESDEVYLN 98 (364)
T ss_pred EEEEEeeEEEeecccceEEEEEEcCCCceeEEEEecCCCC----cCcHHHHHHHhcCCcCeeeEEEEEEecCCCchhHHH
Confidence 346778899999999999999965 679999998764432 223589999999999999999888432 2 234
Q ss_pred EEEecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC-CcEEEeeeccc
Q 003855 574 LVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN-MAAHVSDFGIS 649 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfgla 649 (791)
+|||||+. +|.++++. .+..++...+.-++.||.+||.||| +.+|+||||||.|+|+|.+ |.+||||||.|
T Consensus 99 lVleymP~-tL~~~~r~~~~~~~~mp~~~iKLYt~Qlfrgl~yLh----~~~IcHRDIKPqNlLvD~~tg~LKicDFGSA 173 (364)
T KOG0658|consen 99 LVLEYMPE-TLYRVIRHYTRANQRMPLLEIKLYTYQLFRGLAYLH----SHGICHRDIKPQNLLVDPDTGVLKICDFGSA 173 (364)
T ss_pred HHHHhchH-HHHHHHHHHhhcCCCCceeeeHHHHHHHHHHHHHHH----hcCcccCCCChheEEEcCCCCeEEeccCCcc
Confidence 89999976 99999983 2445888889999999999999999 6899999999999999965 99999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChh-
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLT- 727 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 727 (791)
+.+..++.... ..-|+.|+|||.+.+ ..|+.+.||||.|||+.||+-|++-|.+. .+...+...++-.......
T Consensus 174 K~L~~~epniS---YicSRyYRaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~-s~~dQL~eIik~lG~Pt~e~ 249 (364)
T KOG0658|consen 174 KVLVKGEPNIS---YICSRYYRAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGD-SSVDQLVEIIKVLGTPTRED 249 (364)
T ss_pred eeeccCCCcee---EEEeccccCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCC-CHHHHHHHHHHHhCCCCHHH
Confidence 99877665433 235889999997765 67999999999999999999999988762 2222333333221111111
Q ss_pred ---------hhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 728 ---------EVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 728 ---------~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.-.+.+.......-.....++++.+++.+++..+|.+|.++.|+++
T Consensus 250 I~~mn~~y~~~~~p~ik~~~~~~~~~~~~~~d~~dll~~~L~Y~P~~R~~~~~~l~ 305 (364)
T KOG0658|consen 250 IKSMNPNYTEFKFPQIKAHPWHKVFFKRLPPDALDLLSKLLQYSPSKRLSALEALA 305 (364)
T ss_pred HhhcCcccccccCcccccccceeecccCCCHHHHHHHHHHhccChhhcCCHHHHhc
Confidence 11111111111000012245678899999999999999999999874
No 88
>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome. Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds
Probab=100.00 E-value=6.8e-38 Score=322.45 Aligned_cols=252 Identities=25% Similarity=0.376 Sum_probs=203.7
Q ss_pred hccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
++|...+.||+|+||.||.|...++..||+|.+.... ...+.+.+|+.++++++||||+++++++.+.+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05113 4 KDLTFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVCTKQRPIYIVTEYMS 82 (256)
T ss_pred HHeEEeeEecCcccceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEEccCCCcEEEEEcCC
Confidence 5688889999999999999998777789999886443 223578899999999999999999999998888999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+|+|.+++......+++..++.++.||+.|++||| +.+++|+||||+||++++++.+||+|||.++....... ..
T Consensus 83 ~~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~-~~ 157 (256)
T cd05113 83 NGCLLNYLREHGKRFQPSQLLEMCKDVCEGMAYLE----SKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEY-TS 157 (256)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccCcceEEEcCCCCEEECCCccceecCCCce-ee
Confidence 99999999876556899999999999999999999 67899999999999999999999999999986543321 11
Q ss_pred eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 661 QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
.....++..|+|||...+..++.++|||||||++|||++ |+.||...... .....+......
T Consensus 158 ~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~~--------------- 220 (256)
T cd05113 158 SVGSKFPVRWSPPEVLLYSKFSSKSDVWAFGVLMWEVYSLGKMPYERFNNS--ETVEKVSQGLRL--------------- 220 (256)
T ss_pred cCCCccChhhCCHHHHhcCcccchhHHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHhcCCCC---------------
Confidence 222335678999999988889999999999999999999 99998653221 111111110000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
..+...+..+.+++.+||+.+|++||++.++++.++
T Consensus 221 --~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~ll~~~~ 256 (256)
T cd05113 221 --YRPHLASEKVYAIMYSCWHEKAEERPTFQQLLSSIE 256 (256)
T ss_pred --CCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHhhC
Confidence 001123466789999999999999999999998763
No 89
>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in
Probab=100.00 E-value=7.9e-38 Score=332.90 Aligned_cols=241 Identities=23% Similarity=0.270 Sum_probs=195.4
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNG 582 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 582 (791)
+.||+|+||.||+++.. +|+.||+|++.... ......+..|+.+++.++||||+++++++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (323)
T cd05595 1 KLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFVMEYANGG 80 (323)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEEecCCEEEEEEeCCCCC
Confidence 46999999999999864 78999999997653 234556778999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceee
Q 003855 583 SLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQT 662 (791)
Q Consensus 583 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 662 (791)
+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ...
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~ 153 (323)
T cd05595 81 ELFFHLSRER-VFTEERARFYGAEIVSALEYLH----SRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGA--TMK 153 (323)
T ss_pred cHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCC--ccc
Confidence 9999887654 4889999999999999999999 67899999999999999999999999999875422211 222
Q ss_pred cccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhH
Q 003855 663 MTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFS 742 (791)
Q Consensus 663 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 742 (791)
...|++.|+|||++.+..++.++|||||||++|||++|+.||...... ........ ... .
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-~~~~~~~~----~~~---------------~ 213 (323)
T cd05595 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDHE-RLFELILM----EEI---------------R 213 (323)
T ss_pred cccCCcCcCCcccccCCCCCchhchhhhHHHHHHHHhCCCCCCCCCHH-HHHHHHhc----CCC---------------C
Confidence 346899999999999999999999999999999999999998653211 11111100 000 0
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003855 743 AKMDCILSIMDLALDCCIESPDMRI-----NVTDAAA 774 (791)
Q Consensus 743 ~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~ 774 (791)
.+..++.++.+++.+||+.||++|| ++.++++
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~l~ 250 (323)
T cd05595 214 FPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVME 250 (323)
T ss_pred CCCCCCHHHHHHHHHHccCCHHHhCCCCCCCHHHHHc
Confidence 0113456678999999999999998 7888765
No 90
>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=9.9e-38 Score=326.51 Aligned_cols=255 Identities=25% Similarity=0.439 Sum_probs=204.3
Q ss_pred hccccccccCCCcceEEEEEEe-----cCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTI-----SDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
++|+..+.||+|+||.||+|.. .++..||+|.+.... ....+.+.+|+.++++++||||+++++++..+...++
T Consensus 5 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~l 84 (283)
T cd05090 5 SAVRFMEELGECAFGKIYKGHLYLPGMDHAQLVAIKTLKDINNPQQWGEFQQEASLMAELHHPNIVCLLGVVTQEQPVCM 84 (283)
T ss_pred hhceeeeeccccCCcceEEEEEecCCCCCcceEEEEeccCCCCHHHHHHHHHHHHHHhhCCCCCeeeEEEEEecCCceEE
Confidence 5678889999999999999984 256789999986433 3445678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC----------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC
Q 003855 575 VLEFMPNGSLEKWLYSHN----------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN 638 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~----------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~ 638 (791)
||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+++||||||+||+++++
T Consensus 85 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~nili~~~ 160 (283)
T cd05090 85 LFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSSLDHGDFLHIAIQIAAGMEYLS----SHFFVHKDLAARNILIGEQ 160 (283)
T ss_pred EEEcCCCCcHHHHHHhcCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hcCeehhccccceEEEcCC
Confidence 999999999999986321 24788899999999999999999 6789999999999999999
Q ss_pred CcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHH
Q 003855 639 MAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRW 717 (791)
Q Consensus 639 ~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~ 717 (791)
+.+||+|||+++...............++..|+|||+..+..++.++|||||||++|||++ |..||.+... ......
T Consensus 161 ~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~g~~p~~~~~~--~~~~~~ 238 (283)
T cd05090 161 LHVKISDLGLSREIYSADYYRVQPKSLLPIRWMPPEAIMYGKFSSDSDIWSFGVVLWEIFSFGLQPYYGFSN--QEVIEM 238 (283)
T ss_pred CcEEeccccccccccCCcceecccCCCccceecChHHhccCCCCchhhhHHHHHHHHHHHcCCCCCCCCCCH--HHHHHH
Confidence 9999999999987644332222333445778999999988889999999999999999998 8889865321 111111
Q ss_pred HHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 718 VKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 718 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
+..... .+.+..++..+.+++.+|++.||++||++.++.+.|+.
T Consensus 239 ~~~~~~-----------------~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~~ 282 (283)
T cd05090 239 VRKRQL-----------------LPCSEDCPPRMYSLMTECWQEGPSRRPRFKDIHTRLRS 282 (283)
T ss_pred HHcCCc-----------------CCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHhhc
Confidence 111000 01112345678899999999999999999999998864
No 91
>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2. Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve
Probab=100.00 E-value=1.3e-37 Score=324.99 Aligned_cols=260 Identities=23% Similarity=0.401 Sum_probs=207.3
Q ss_pred hhccccccccCCCcceEEEEEEec-CCc----EEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeee
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGT----DVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 573 (791)
.++|+..+.||+|+||+||+|++. +++ .||+|++.... ....+.+.+|+.+++.++||||+++++++... ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~ 84 (279)
T cd05109 6 ETELKKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVCRLLGICLTS-TVQ 84 (279)
T ss_pred hhheeeeeecCCCCCceEEEEEEecCCCccceEEEEEEecCCCCHHHHHHHHHHHHHHHhcCCCCCceEEEEEcCC-CcE
Confidence 357888999999999999999853 444 48999886443 33456788999999999999999999999754 467
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
+++||+++|+|.+++......+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+|||+++.+.
T Consensus 85 l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~ 160 (279)
T cd05109 85 LVTQLMPYGCLLDYVRENKDRIGSQDLLNWCVQIAKGMSYLE----EVRLVHRDLAARNVLVKSPNHVKITDFGLARLLD 160 (279)
T ss_pred EEEEcCCCCCHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccccceEEEcCCCcEEECCCCceeecc
Confidence 999999999999999876666899999999999999999999 6789999999999999999999999999998765
Q ss_pred CCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcch
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
............++..|+|||...+..++.++|||||||++|||++ |..||+.... .....++......
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~~~~~~~~-------- 230 (279)
T cd05109 161 IDETEYHADGGKVPIKWMALESILHRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPA--REIPDLLEKGERL-------- 230 (279)
T ss_pred cccceeecCCCccchhhCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCcC--------
Confidence 3322222222335678999999988889999999999999999998 8899865321 1222222211100
Q ss_pred hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 733 NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
+.+..++..+.+++.+||+.||++||++.++++.++.+.+..
T Consensus 231 ---------~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~l~~~l~~~~~~~ 272 (279)
T cd05109 231 ---------PQPPICTIDVYMIMVKCWMIDSECRPRFRELVDEFSRMARDP 272 (279)
T ss_pred ---------CCCccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHhhcCC
Confidence 111234567889999999999999999999999998885543
No 92
>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D
Probab=100.00 E-value=1.1e-37 Score=338.39 Aligned_cols=260 Identities=22% Similarity=0.392 Sum_probs=205.8
Q ss_pred HhhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhcc-CCccceeeeeeccCC
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVR-HRNLIKILSSCSNPD 570 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~ 570 (791)
..++|.+.+.||+|+||.||+|++. .+..||+|++.... ....+.+..|+.++.++. ||||+++++++....
T Consensus 35 ~~~~~~~~~~lG~G~fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~~~~~ 114 (401)
T cd05107 35 PRDNLVLGRTLGSGAFGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGACTKGG 114 (401)
T ss_pred cHHHeehhhhccCCCceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEEccCC
Confidence 3467888999999999999999863 34679999997543 333457889999999997 999999999999999
Q ss_pred eeeEEEecCCCCCHHHHHhhCC----------------------------------------------------------
Q 003855 571 FKALVLEFMPNGSLEKWLYSHN---------------------------------------------------------- 592 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 592 (791)
..++||||+++|+|.++++...
T Consensus 115 ~~~iv~E~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (401)
T cd05107 115 PIYIITEYCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQD 194 (401)
T ss_pred CcEEEEeccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhc
Confidence 9999999999999999997431
Q ss_pred ---------------------------------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCe
Q 003855 593 ---------------------------------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNI 633 (791)
Q Consensus 593 ---------------------------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Ni 633 (791)
..+++..+.+++.|++.||+||| +.+++||||||+||
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrdlkp~Ni 270 (401)
T cd05107 195 MKGTVKYADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFSYQVANGMEFLA----SKNCVHRDLAARNV 270 (401)
T ss_pred chhhhhhhhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHHHHHHHHHHHHh----cCCcCcccCCcceE
Confidence 13567788899999999999999 67899999999999
Q ss_pred EeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcc
Q 003855 634 LLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEM 712 (791)
Q Consensus 634 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~ 712 (791)
++++++.+||+|||+++.+.............++..|+|||.+....++.++|||||||++|||++ |+.||......+.
T Consensus 271 Ll~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~ 350 (401)
T cd05107 271 LICEGKLVKICDFGLARDIMRDSNYISKGSTFLPLKWMAPESIFNNLYTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQ 350 (401)
T ss_pred EEeCCCEEEEEecCcceecccccccccCCCcCCCCceeChHHhcCCCCCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHH
Confidence 999999999999999987543322222223356788999999988889999999999999999998 8889865322111
Q ss_pred hHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 713 SLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
....+.. +. ..+.+..++.++.+++.+||..+|++||++.|+++.|+++.
T Consensus 351 -~~~~~~~----~~-------------~~~~p~~~~~~l~~li~~cl~~~P~~RPs~~ell~~L~~~~ 400 (401)
T cd05107 351 -FYNAIKR----GY-------------RMAKPAHASDEIYEIMQKCWEEKFEIRPDFSQLVHLVGDLL 400 (401)
T ss_pred -HHHHHHc----CC-------------CCCCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHHHh
Confidence 1111110 00 00111234567889999999999999999999999998863
No 93
>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase. Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays
Probab=100.00 E-value=1.6e-37 Score=321.16 Aligned_cols=254 Identities=25% Similarity=0.403 Sum_probs=205.1
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.+|+..+.||+|+||.||+|..+ +++.||+|++.... ...+.+.+|++++++++||||+++++++......++||||+
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~K~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (263)
T cd05052 6 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDT-MEVEEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFM 84 (263)
T ss_pred HHeEEeeecCCcccceEEEEEEecCCceEEEEEecCCc-hHHHHHHHHHHHHHhCCCCChhheEEEEcCCCCcEEEEEeC
Confidence 46888899999999999999865 58899999987543 23467888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++++|.+++... ...+++..+..++.|+++||+||| ..+++||||||+||++++++.+||+|||+++........
T Consensus 85 ~~~~L~~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~ 160 (263)
T cd05052 85 TYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLE----KKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYT 160 (263)
T ss_pred CCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccCcceEEEcCCCcEEeCCCccccccccceee
Confidence 999999999754 345899999999999999999999 678999999999999999999999999999876433211
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
......++..|+|||+..+..++.++|||||||++|||++ |..||..... ....+.+.....
T Consensus 161 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~~~~-------------- 223 (263)
T cd05052 161 -AHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYPGIDL--SQVYELLEKGYR-------------- 223 (263)
T ss_pred -ccCCCCCccccCCHHHhccCCCCchhHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHHCCCC--------------
Confidence 1111224568999999988899999999999999999998 8889865211 111111111000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
...+..++.++.+++.+||+.+|++||++.|+.++|+.+
T Consensus 224 ---~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 262 (263)
T cd05052 224 ---MERPEGCPPKVYELMRACWQWNPSDRPSFAEIHQAFETM 262 (263)
T ss_pred ---CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHhh
Confidence 011123456788999999999999999999999999875
No 94
>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase
Probab=100.00 E-value=3.6e-37 Score=319.51 Aligned_cols=258 Identities=23% Similarity=0.327 Sum_probs=207.7
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehh---hhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ---LERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+|+.. +++.||||.+... .......+.+|++++++++||||+++++++.+.+..++|+
T Consensus 2 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08228 2 ANFQIEKKIGRGQFSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSFIEDNELNIVL 81 (267)
T ss_pred cceeeeeeeccCCCeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeEEECCeEEEEE
Confidence 57889999999999999999865 7899999987542 2344567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 577 EFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 577 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
||+++|+|.+++.. ....+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++..+.
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~ 157 (267)
T cd08228 82 ELADAGDLSQMIKYFKKQKRLIPERTVWKYFVQLCSAVEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCcHHHHHHHhhhccCCCCHHHHHHHHHHHHHHHHHHh----hCCeeCCCCCHHHEEEcCCCCEEECccccceecc
Confidence 99999999998863 2345788999999999999999999 6789999999999999999999999999998764
Q ss_pred CCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
.... ......++..|+|||.+.+..++.++||||||+++|||++|+.||...... ...+......... +.
T Consensus 158 ~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~el~~g~~p~~~~~~~---~~~~~~~~~~~~~-----~~ 227 (267)
T cd08228 158 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LFSLCQKIEQCDY-----PP 227 (267)
T ss_pred chhH--HHhcCCCCccccChhhhccCCCCchhhHHHHHHHHHHHhcCCCCCcccccc---HHHHHHHHhcCCC-----CC
Confidence 3221 112245788999999998888999999999999999999999998542221 1111111110000 00
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
. ....++..+.+++.+||+.+|++||++.+|++.+++++
T Consensus 228 ~--------~~~~~~~~~~~li~~cl~~~p~~Rp~~~~vl~~~~~~~ 266 (267)
T cd08228 228 L--------PTEHYSEKLRELVSMCIYPDPDQRPDIGYVHQIAKQMH 266 (267)
T ss_pred C--------ChhhcCHHHHHHHHHHCCCCcccCcCHHHHHHHHHHhc
Confidence 0 01134566889999999999999999999999999875
No 95
>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos
Probab=100.00 E-value=2.4e-37 Score=332.63 Aligned_cols=266 Identities=23% Similarity=0.289 Sum_probs=197.1
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccC-----Ceee
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP-----DFKA 573 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~ 573 (791)
+|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.++++++||||+++++++... ...+
T Consensus 1 ry~i~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~ 80 (338)
T cd07859 1 RYKIQEVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFKDIY 80 (338)
T ss_pred CeEEEEEEeecCCeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEeccCCCCCceEE
Confidence 4788899999999999999965 78999999986432 23345688899999999999999999987533 3479
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
+||||+. ++|.+++.... .+++..+..++.|+++||.||| +.+|+||||||+||+++.++.+||+|||+++...
T Consensus 81 lv~e~~~-~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~ 154 (338)
T cd07859 81 VVFELME-SDLHQVIKAND-DLTPEHHQFFLYQLLRALKYIH----TANVFHRDLKPKNILANADCKLKICDFGLARVAF 154 (338)
T ss_pred EEEecCC-CCHHHHHHhcc-cCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCcEEEccCccccccc
Confidence 9999995 69999987654 3899999999999999999999 6789999999999999999999999999998653
Q ss_pred CCCC-cceeecccccccccCCCccCC--CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCCh----
Q 003855 654 EGED-SVTQTMTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGL---- 726 (791)
Q Consensus 654 ~~~~-~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~---- 726 (791)
.... ........|+..|+|||++.+ ..++.++|||||||++|||+||+.||.+... ......+........
T Consensus 155 ~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~--~~~~~~~~~~~~~~~~~~~ 232 (338)
T cd07859 155 NDTPTAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNV--VHQLDLITDLLGTPSPETI 232 (338)
T ss_pred cccCccccccCCCCCCCcCCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCCh--HHHHHHHHHHhCCCCHHHH
Confidence 3221 112233568999999998765 6789999999999999999999999965321 111111111111000
Q ss_pred hhhcchh-------hhh-hHHhh-HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 727 TEVVDAN-------LVR-EEQAF-SAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 727 ~~~~d~~-------~~~-~~~~~-~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..+.... +.. ..... .....++..+.+++.+||+.||++||++.|+++.
T Consensus 233 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~e~l~h 290 (338)
T cd07859 233 SRVRNEKARRYLSSMRKKQPVPFSQKFPNADPLALRLLERLLAFDPKDRPTAEEALAD 290 (338)
T ss_pred HHhhhhhHHHHHHhhcccCCCchHHhcCCCChHHHHHHHHHcCcCcccCCCHHHHhcC
Confidence 0000000 000 00000 0001234667899999999999999999999853
No 96
>KOG1989 consensus ARK protein kinase family [Signal transduction mechanisms]
Probab=100.00 E-value=7.3e-38 Score=343.00 Aligned_cols=260 Identities=24% Similarity=0.307 Sum_probs=210.9
Q ss_pred hhccccccccCCCcceEEEEEEecCC-cEEEEEEeehhhhHHHHHHHHHHHHHHhcc-CCccceeeeee-c-----c-CC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISDG-TDVAIKIFNLQLERAFRSFDSECEVLRNVR-HRNLIKILSSC-S-----N-PD 570 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~~-~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~l~~~~-~-----~-~~ 570 (791)
..++++.+.|.+|||+.||.|+...+ ..||+|++....+...+.+.+|+++|++|. |||||.+++.. . . ..
T Consensus 36 ~~~v~V~~vLAEGGFa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~~~~~~~~~~~ 115 (738)
T KOG1989|consen 36 SHRVTVEKVLAEGGFAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSAINRSSNNGVW 115 (738)
T ss_pred CEEEEEEEEEccCCcEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEeccccccccCCCcee
Confidence 35677889999999999999997655 999999988888888899999999999996 99999999933 1 1 24
Q ss_pred eeeEEEecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 571 FKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
+.++.||||+||.|-+++..+ ...+.+.++++|++++++|+++||.. ..+|||||||.+|||++.++..||||||.|
T Consensus 116 EvllLmEyC~gg~Lvd~mn~Rlq~~lte~eVLkIf~dv~~AVa~mH~~--~pPiIHRDLKiENvLls~~g~~KLCDFGSa 193 (738)
T KOG1989|consen 116 EVLLLMEYCKGGSLVDFMNTRLQTRLTEDEVLKIFYDVCEAVAAMHYL--KPPIIHRDLKIENVLLSADGNYKLCDFGSA 193 (738)
T ss_pred EEEeehhhccCCcHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHhcC--CCccchhhhhhhheEEcCCCCEEeCccccc
Confidence 678999999999999999844 22399999999999999999999953 567999999999999999999999999999
Q ss_pred cccCCCCCcc-e------eecccccccccCCCc---cCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHH
Q 003855 650 KLLGEGEDSV-T------QTMTMATIGYMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVK 719 (791)
Q Consensus 650 ~~~~~~~~~~-~------~~~~~g~~~y~aPE~---~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~ 719 (791)
.......... . .-....|+-|+|||. ..+...++|+||||+||+||-|+....||++...-
T Consensus 194 tt~~~~~~~~~e~~~ve~eI~k~TTp~YRsPEMIDlysg~pI~eKsDIWALGclLYkLCy~t~PFe~sg~l--------- 264 (738)
T KOG1989|consen 194 TTKILSPTSAQEVNYVEEEIEKYTTPQYRSPEMIDLYSGLPIGEKSDIWALGCLLYKLCYFTTPFEESGKL--------- 264 (738)
T ss_pred ccccCCCccHHHHHHHHHHHHhhCCccccChHHHhhhcCCCCcchhHHHHHHHHHHHHHHhCCCcCcCcce---------
Confidence 7543322110 0 111246899999995 46678999999999999999999999999873211
Q ss_pred HhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 720 ESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 720 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
.+++.. ..++....++..+.+||+.||++||.+||++.||+..+.++....
T Consensus 265 --------aIlng~-----Y~~P~~p~ys~~l~~LI~~mL~~nP~~RPnI~Qv~~~~~~l~~~~ 315 (738)
T KOG1989|consen 265 --------AILNGN-----YSFPPFPNYSDRLKDLIRTMLQPNPDERPNIYQVLEEIFELANKP 315 (738)
T ss_pred --------eEEecc-----ccCCCCccHHHHHHHHHHHHhccCcccCCCHHHHHHHHHHHhcCC
Confidence 111111 122333467788999999999999999999999999999886543
No 97
>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows
Probab=100.00 E-value=1.2e-37 Score=320.74 Aligned_cols=251 Identities=28% Similarity=0.397 Sum_probs=202.6
Q ss_pred hccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
.+|+..+.||+|+||.||+|.++++..+|+|++..... ....+.+|++++++++||||+++++++...+..++||||++
T Consensus 4 ~~~~~~~~lg~G~~~~v~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~ 82 (256)
T cd05059 4 SELTFLKELGSGQFGVVHLGKWRGKIDVAIKMIREGAM-SEDDFIEEAKVMMKLSHPNLVQLYGVCTKQRPIFIVTEYMA 82 (256)
T ss_pred HHcchhhhhccCCCceEEEeEecCCccEEEEEeccCCC-CHHHHHHHHHHHHhCCCCCEEEEEEEEcCCCceEEEEecCC
Confidence 45788899999999999999988778899998864322 23467789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+++|.+++......+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||+++........ .
T Consensus 83 ~~~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~-~ 157 (256)
T cd05059 83 NGCLLNYLRERKGKLGTEWLLDMCSDVCEAMEYLE----SNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYT-S 157 (256)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCcccccccHhhEEECCCCcEEECCcccceeccccccc-c
Confidence 99999999876556899999999999999999999 678999999999999999999999999999865432211 1
Q ss_pred eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 661 QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
.....++..|+|||...+..++.++||||||+++|||++ |+.||......+ ....+....
T Consensus 158 ~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~--~~~~~~~~~----------------- 218 (256)
T cd05059 158 SQGTKFPVKWAPPEVFDYSRFSSKSDVWSFGVLMWEVFSEGKMPYERFSNSE--VVESVSAGY----------------- 218 (256)
T ss_pred cCCCCCCccccCHHHhccCCCCchhhHHHHHHHHHHHhccCCCCCCCCCHHH--HHHHHHcCC-----------------
Confidence 111223457999999988899999999999999999999 788986532211 111111000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
....+..++.++.+++.+||+.+|++|||+.|+++.|
T Consensus 219 ~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~~~l~~l 255 (256)
T cd05059 219 RLYRPKLAPTEVYTIMYSCWHEKPEDRPAFKKLLSQL 255 (256)
T ss_pred cCCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHh
Confidence 0011113566788999999999999999999999886
No 98
>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign
Probab=100.00 E-value=1.7e-37 Score=324.73 Aligned_cols=268 Identities=24% Similarity=0.388 Sum_probs=204.5
Q ss_pred cc-ccccccCCCcceEEEEEEe-----cCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeecc--CCee
Q 003855 502 EF-NECNLLGTGSFGSVYKGTI-----SDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSN--PDFK 572 (791)
Q Consensus 502 ~~-~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 572 (791)
+| +..+.||+|+||+||.+.+ .+++.||+|++.... ....+.+.+|++++++++||||+++++++.. ....
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 83 (283)
T cd05080 4 RYLKKIRVLGEGHFGKVSLYCYDPANDGTGEMVAVKTLKRECGQQNTSGWKKEINILKTLYHENIVKYKGCCSEQGGKGL 83 (283)
T ss_pred hhceeceecccCCCcEEEEeeEccccCCCCceEEEEEeccccChHHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCceE
Confidence 44 7889999999999988653 367889999987543 2345678889999999999999999998765 3457
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++||||+++|+|.+++.... +++.++..++.|++.|+.||| +.+|+||||||+||++++++.++|+|||+++.+
T Consensus 84 ~lv~e~~~~~~l~~~~~~~~--l~~~~~~~i~~~l~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~ 157 (283)
T cd05080 84 QLIMEYVPLGSLRDYLPKHK--LNLAQLLLFAQQICEGMAYLH----SQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAV 157 (283)
T ss_pred EEEecCCCCCCHHHHHHHcC--CCHHHHHHHHHHHHHHHHHHH----HCCeeccccChheEEEcCCCcEEEeeccccccc
Confidence 89999999999999997654 899999999999999999999 678999999999999999999999999999876
Q ss_pred CCCCCcce-eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc-CCChhhhc
Q 003855 653 GEGEDSVT-QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL-PHGLTEVV 730 (791)
Q Consensus 653 ~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 730 (791)
........ .....++..|+|||...+..++.++||||||+++|||+||+.|+............+..... .....+.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (283)
T cd05080 158 PEGHEYYRVREDGDSPVFWYAVECLKENKFSYASDVWSFGVTLYELLTHCDSKQSPPKKFEEMIGPKQGQMTVVRLIELL 237 (283)
T ss_pred CCcchhhccCCCCCCCceeeCHhHhcccCCCcccccHHHHHHHHHHHhCCCCCCCCcchhhhhhcccccccchhhhhhhh
Confidence 54332111 11223566799999998888999999999999999999999998653221111111000000 00011111
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
+... ..+.+..++.++.+++.+||+.+|++||+++++++.|+++.
T Consensus 238 ~~~~-----~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~~i~~~l~~~~ 282 (283)
T cd05080 238 ERGM-----RLPCPKNCPQEVYILMKNCWETEAKFRPTFRSLIPILKEMH 282 (283)
T ss_pred hcCC-----CCCCCCCCCHHHHHHHHHHhccChhhCCCHHHHHHHHHHhh
Confidence 1111 11112345678999999999999999999999999999874
No 99
>PLN00034 mitogen-activated protein kinase kinase; Provisional
Probab=100.00 E-value=1.9e-37 Score=334.45 Aligned_cols=248 Identities=25% Similarity=0.355 Sum_probs=194.3
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+++++.++|+||+++++++.+.+..++||||
T Consensus 74 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 153 (353)
T PLN00034 74 SELERVNRIGSGAGGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMFDHNGEIQVLLEF 153 (353)
T ss_pred HHHhhhhhccCCCCeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEeccCCeEEEEEec
Confidence 45677889999999999999865 78999999986543 33456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++|+|.+.. ..++..+..++.||+.||+||| +.+|+||||||+||++++++.+||+|||+++.+.....
T Consensus 154 ~~~~~L~~~~-----~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~- 223 (353)
T PLN00034 154 MDGGSLEGTH-----IADEQFLADVARQILSGIAYLH----RRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMD- 223 (353)
T ss_pred CCCCcccccc-----cCCHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCEEEcccccceecccccc-
Confidence 9999986532 2567778899999999999999 67899999999999999999999999999987643221
Q ss_pred ceeecccccccccCCCccCC-----CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 659 VTQTMTMATIGYMAPEYGSE-----GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
.....+|+..|+|||++.. ...+.++|||||||++|||++|+.||...... .+...........
T Consensus 224 -~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~--~~~~~~~~~~~~~-------- 292 (353)
T PLN00034 224 -PCNSSVGTIAYMSPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGVGRQG--DWASLMCAICMSQ-------- 292 (353)
T ss_pred -cccccccCccccCccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCCCCCc--cHHHHHHHHhccC--------
Confidence 1223468999999998643 33456899999999999999999999732211 1111111100000
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.......++.++.+++.+||+.||++||++.|+++.
T Consensus 293 ------~~~~~~~~~~~l~~li~~~l~~~P~~Rpt~~ell~h 328 (353)
T PLN00034 293 ------PPEAPATASREFRHFISCCLQREPAKRWSAMQLLQH 328 (353)
T ss_pred ------CCCCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000112345678899999999999999999999874
No 100
>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate
Probab=100.00 E-value=1.3e-37 Score=331.88 Aligned_cols=242 Identities=24% Similarity=0.302 Sum_probs=196.1
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNG 582 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 582 (791)
+.||+|+||.||+++.. +++.||+|++.... ......+.+|+.+++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~~~~lv~Ey~~~g 80 (328)
T cd05593 1 KLLGKGTFGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSFQTKDRLCFVMEYVNGG 80 (328)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999864 78999999997543 334567788999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceee
Q 003855 583 SLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQT 662 (791)
Q Consensus 583 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 662 (791)
+|.+++.... .+++.++..++.||+.||+||| +.+|+||||||+||++++++.+||+|||+++...... ....
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~--~~~~ 153 (328)
T cd05593 81 ELFFHLSRER-VFSEDRTRFYGAEIVSALDYLH----SGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDA--ATMK 153 (328)
T ss_pred CHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcc--cccc
Confidence 9999887654 4889999999999999999999 6789999999999999999999999999987543221 1223
Q ss_pred cccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhH
Q 003855 663 MTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFS 742 (791)
Q Consensus 663 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 742 (791)
...||+.|+|||++.+..++.++|||||||++|||++|+.||..... ............ .
T Consensus 154 ~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~Pf~~~~~-----~~~~~~~~~~~~---------------~ 213 (328)
T cd05593 154 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH-----EKLFELILMEDI---------------K 213 (328)
T ss_pred cccCCcCccChhhhcCCCCCccCCccccchHHHHHhhCCCCCCCCCH-----HHHHHHhccCCc---------------c
Confidence 34689999999999988999999999999999999999999965211 111111110000 0
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 003855 743 AKMDCILSIMDLALDCCIESPDMRI-----NVTDAAAK 775 (791)
Q Consensus 743 ~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~~ 775 (791)
.+..++.++.+++.+|++.||++|| ++.|+++.
T Consensus 214 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~h 251 (328)
T cd05593 214 FPRTLSADAKSLLSGLLIKDPNKRLGGGPDDAKEIMRH 251 (328)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHhcC
Confidence 0112345678999999999999997 88888753
No 101
>KOG0574 consensus STE20-like serine/threonine kinase MST [Signal transduction mechanisms]
Probab=100.00 E-value=8.3e-40 Score=311.15 Aligned_cols=249 Identities=24% Similarity=0.345 Sum_probs=211.7
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
-|.+++++|+|+||.||+|.++ .|+.||||.+... ...+++.+|+.+|++.+.|++|+++|.+......++|||||.
T Consensus 34 VFDi~~KLGEGSYGSV~KAIH~EsG~v~AIK~VPV~--sDLQEIIKEISIMQQC~S~yVVKYYGSYFK~sDLWIVMEYCG 111 (502)
T KOG0574|consen 34 VFDIVGKLGEGSYGSVHKAIHRESGHVLAIKKVPVD--TDLQEIIKEISIMQQCKSKYVVKYYGSYFKHSDLWIVMEYCG 111 (502)
T ss_pred HHHHHHHhcCCcchHHHHHHHhccCcEEEEEecCcc--chHHHHHHHHHHHHHcCCchhhhhhhhhccCCceEeehhhcC
Confidence 4677889999999999999875 7999999987644 446788999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
.|++.+.++.+...+.+.++..+++..++||+||| ...-+|||||+.|||++.+|.+|++|||.|..+.+.. ..
T Consensus 112 AGSiSDI~R~R~K~L~E~EIs~iL~~TLKGL~YLH----~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTM--AK 185 (502)
T KOG0574|consen 112 AGSISDIMRARRKPLSEQEISAVLRDTLKGLQYLH----DLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTM--AK 185 (502)
T ss_pred CCcHHHHHHHhcCCccHHHHHHHHHHHHhHHHHHH----HHHHHHhhcccccEEEcccchhhhhhccccchhhhhH--Hh
Confidence 99999999988888999999999999999999999 5678999999999999999999999999997664432 23
Q ss_pred eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHh
Q 003855 661 QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQA 740 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 740 (791)
.....||+.|||||++..-.|..++||||+|++..||..|++||.+..+...-+ .++.. .+..
T Consensus 186 RNTVIGTPFWMAPEVI~EIGY~~~ADIWSLGITaIEMAEG~PPYsDIHPMRAIF------MIPT~-----------PPPT 248 (502)
T KOG0574|consen 186 RNTVIGTPFWMAPEVIEEIGYDTKADIWSLGITAIEMAEGRPPYSDIHPMRAIF------MIPTK-----------PPPT 248 (502)
T ss_pred hCccccCcccccHHHHHHhccchhhhHhhhcchhhhhhcCCCCcccccccceeE------eccCC-----------CCCC
Confidence 445679999999999999899999999999999999999999998755432210 01111 0112
Q ss_pred hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 741 FSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 741 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
+-.++..+.++.++++.|+-..|++|-|+.++++.
T Consensus 249 F~KPE~WS~~F~DFi~~CLiK~PE~R~TA~~L~~H 283 (502)
T KOG0574|consen 249 FKKPEEWSSEFNDFIRSCLIKKPEERKTALRLCEH 283 (502)
T ss_pred CCChHhhhhHHHHHHHHHhcCCHHHHHHHHHHhhh
Confidence 23455677889999999999999999999988763
No 102
>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein. Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi
Probab=100.00 E-value=1.8e-37 Score=325.72 Aligned_cols=257 Identities=28% Similarity=0.436 Sum_probs=205.6
Q ss_pred ccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
+|++.+.||+|+||.||+|... ....+|+|.+.... ....+.+..|+.+++.++||||+++++++...+..++
T Consensus 1 ~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~l 80 (290)
T cd05045 1 NLVLGKTLGEGEFGKVVKATAFRLKGRAGYTTVAVKMLKENASSSELRDLLSEFNLLKQVNHPHVIKLYGACSQDGPLLL 80 (290)
T ss_pred CccccccccCcCCcceEEEEEecCCCCCcceeEEEEecCCCCCHHHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCCcEE
Confidence 4778899999999999999853 23578999876543 3345678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC-----------------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCC
Q 003855 575 VLEFMPNGSLEKWLYSHN-----------------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPT 631 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~-----------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~ 631 (791)
|+||+.+|+|.+++.... ..+++.++..++.|++.||+||| +.+++||||||+
T Consensus 81 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH----~~~ivH~dikp~ 156 (290)
T cd05045 81 IVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYLDNPDERALTMGDLISFAWQISRGMQYLA----EMKLVHRDLAAR 156 (290)
T ss_pred EEEecCCCCHHHHHHhcCCccccccccccccccccccCccccccCHHHHHHHHHHHHHHHHHHH----HCCeehhhhhhh
Confidence 999999999999986421 24788999999999999999999 678999999999
Q ss_pred CeEeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccC
Q 003855 632 NILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTG 710 (791)
Q Consensus 632 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~ 710 (791)
||++++++.+||+|||+++...............++..|+|||...+..++.++||||||+++|||++ |..||.+..+.
T Consensus 157 nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~ 236 (290)
T cd05045 157 NVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIAPE 236 (290)
T ss_pred eEEEcCCCcEEeccccccccccCccchhcccCCCCCccccCHHHHccCCcchHhHHHHHHHHHHHHHhcCCCCCCCCCHH
Confidence 99999999999999999986544333222233345678999999888889999999999999999999 99998653211
Q ss_pred cchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 711 EMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
.+..++..... .+.+..++..+.+++.+|++.+|++||++.|+++.|+++..
T Consensus 237 --~~~~~~~~~~~-----------------~~~~~~~~~~~~~~i~~cl~~~P~~Rp~~~~i~~~l~~~~~ 288 (290)
T cd05045 237 --RLFNLLKTGYR-----------------MERPENCSEEMYNLMLTCWKQEPDKRPTFADISKELEKMMV 288 (290)
T ss_pred --HHHHHHhCCCC-----------------CCCCCCCCHHHHHHHHHHccCCcccCCCHHHHHHHHHHHHh
Confidence 11222111000 01112345678899999999999999999999999998854
No 103
>KOG0611 consensus Predicted serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=4.6e-38 Score=310.64 Aligned_cols=246 Identities=25% Similarity=0.344 Sum_probs=205.0
Q ss_pred hhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
..+|++.+.+|+|+||.|-+|.. ..|+.||||.+++.. ++..-.+.+|+++|+.++||||++++++|++.+...+|
T Consensus 52 kHRyE~~etLGkGTYGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVFENkdKIviv 131 (668)
T KOG0611|consen 52 KHRYEITETLGKGTYGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVFENKDKIVIV 131 (668)
T ss_pred hhHHHHHHHhcCCcccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhhcCCceEEEE
Confidence 35788899999999999999985 689999999887654 44556788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
|||..+|.|.+|+...+. +++.+...+++||..|+.|+| .++++|||||.+|||+|.++++||+|||++-.+...
T Consensus 132 MEYaS~GeLYDYiSer~~-LsErEaRhfFRQIvSAVhYCH----knrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~ 206 (668)
T KOG0611|consen 132 MEYASGGELYDYISERGS-LSEREARHFFRQIVSAVHYCH----KNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADK 206 (668)
T ss_pred EEecCCccHHHHHHHhcc-ccHHHHHHHHHHHHHHHHHHh----hccceecccchhheeecCCCCeeeeccchhhhhccc
Confidence 999999999999987765 899999999999999999999 678999999999999999999999999999887543
Q ss_pred CCcceeecccccccccCCCccCCCCC-CccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSEGIV-SAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~~~~-~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
...+..+|++-|.+||+..+..| .+.+|-||+||++|-++.|..||++.. ....+++.-.
T Consensus 207 ---kfLqTFCGSPLYASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~D-----hk~lvrQIs~----------- 267 (668)
T KOG0611|consen 207 ---KFLQTFCGSPLYASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRD-----HKRLVRQISR----------- 267 (668)
T ss_pred ---cHHHHhcCCcccCCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCch-----HHHHHHHhhc-----------
Confidence 23455789999999999988776 457999999999999999999998732 2222222111
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.+...+ -+....-+|+.|+..+|++|.|..||..
T Consensus 268 -GaYrEP~----~PSdA~gLIRwmLmVNP~RRATieDiAs 302 (668)
T KOG0611|consen 268 -GAYREPE----TPSDASGLIRWMLMVNPERRATIEDIAS 302 (668)
T ss_pred -ccccCCC----CCchHHHHHHHHHhcCcccchhHHHHhh
Confidence 1111111 1223447999999999999999999875
No 104
>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase). Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It
Probab=100.00 E-value=2e-37 Score=323.77 Aligned_cols=261 Identities=22% Similarity=0.365 Sum_probs=210.2
Q ss_pred HhhccccccccCCCcceEEEEEEecC-----CcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeecc-CCe
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTISD-----GTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSN-PDF 571 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 571 (791)
..++|+..+.||+|+||.||+|...+ +..|++|++.... ....+.+.+|+.++++++||||+++++++.. +..
T Consensus 4 ~~~~~~~~~~i~~g~~g~V~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~ 83 (280)
T cd05043 4 SRDRVTLSDLLQEGTFGRIFYGILIDEKPGKEEEVFVKTVKDHASEIQVTLLLQESCLLYGLSHQNILPILHVCIEDGEP 83 (280)
T ss_pred chhheEEeeeecccCCceEEEEEEecCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEecCCCC
Confidence 35788999999999999999999765 6889999886442 3445678899999999999999999998765 567
Q ss_pred eeEEEecCCCCCHHHHHhhCC-------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEe
Q 003855 572 KALVLEFMPNGSLEKWLYSHN-------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVS 644 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~-------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~ 644 (791)
.++++||+++|+|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~LH----~~~i~H~di~p~nil~~~~~~~kl~ 159 (280)
T cd05043 84 PFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVHMAIQIACGMSYLH----KRGVIHKDIAARNCVIDEELQVKIT 159 (280)
T ss_pred CEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccCHhhEEEcCCCcEEEC
Confidence 899999999999999997532 34889999999999999999999 6789999999999999999999999
Q ss_pred eeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcC
Q 003855 645 DFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLP 723 (791)
Q Consensus 645 Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 723 (791)
|||+++.+.............++..|+|||++.+..++.++||||||+++||+++ |+.||..... ..+..++.....
T Consensus 160 d~g~~~~~~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~~ 237 (280)
T cd05043 160 DNALSRDLFPMDYHCLGDNENRPVKWMALESLVNKEYSSASDVWSFGVLLWELMTLGQTPYVEIDP--FEMAAYLKDGYR 237 (280)
T ss_pred CCCCcccccCCceEEeCCCCCcchhccCHHHHhcCCCCchhhHHHhHHHHHHHhcCCCCCcCcCCH--HHHHHHHHcCCC
Confidence 9999987654332222222345778999999988889999999999999999999 9999875321 122222221100
Q ss_pred CChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 724 HGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 724 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
......++..+.+++.+||+.||++|||+.|+++.|+.+..+
T Consensus 238 -----------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~~~~~~ 279 (280)
T cd05043 238 -----------------LAQPINCPDELFAVMACCWALDPEERPSFSQLVQCLTDFHAQ 279 (280)
T ss_pred -----------------CCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhc
Confidence 011123456788999999999999999999999999998754
No 105
>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A. Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory
Probab=100.00 E-value=1.8e-37 Score=323.94 Aligned_cols=254 Identities=26% Similarity=0.421 Sum_probs=204.8
Q ss_pred hccccccccCCCcceEEEEEEec------CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
.+|+..+.||+|+||.||++... ++..+|+|.+........+.+..|+++++.++||||+++++++.+.+..++
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 84 (280)
T cd05092 5 RDIVLKWELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTVLQHQHIVRFYGVCTEGRPLLM 84 (280)
T ss_pred HhceeccccCCccCCeEEEeEEecCCCCCCceEEEEEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEEecCCceEE
Confidence 56778899999999999999642 466899998876666666789999999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC--------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCc
Q 003855 575 VLEFMPNGSLEKWLYSHN--------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMA 640 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~--------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~ 640 (791)
||||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||++++++.
T Consensus 85 v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~~i~H~dlkp~nil~~~~~~ 160 (280)
T cd05092 85 VFEYMRHGDLNRFLRSHGPDAKILAGGEDVAPGQLTLGQMLAIASQIASGMVYLA----SLHFVHRDLATRNCLVGQGLV 160 (280)
T ss_pred EEecCCCCCHHHHHHhcCcchhhhcccccCCccccCHHHHHHHHHHHHHHHHHHH----HCCeecccccHhhEEEcCCCC
Confidence 999999999999997543 24789999999999999999999 678999999999999999999
Q ss_pred EEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHH
Q 003855 641 AHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVK 719 (791)
Q Consensus 641 ~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 719 (791)
+||+|||+++...............+++.|+|||+..+..++.++|||||||++|||++ |..||......+ ....+.
T Consensus 161 ~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~~--~~~~~~ 238 (280)
T cd05092 161 VKIGDFGMSRDIYSTDYYRVGGRTMLPIRWMPPESILYRKFTTESDIWSFGVVLWEIFTYGKQPWYQLSNTE--AIECIT 238 (280)
T ss_pred EEECCCCceeEcCCCceeecCCCccccccccCHHHhccCCcCchhhHHHHHHHHHHHHcCCCCCCccCCHHH--HHHHHH
Confidence 99999999976543322222223345678999999988899999999999999999998 888986432211 111110
Q ss_pred HhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 720 ESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 720 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
... ....+..++..+.+++.+||+.||++||++.|+.+.|+
T Consensus 239 ~~~-----------------~~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~l~~~l~ 279 (280)
T cd05092 239 QGR-----------------ELERPRTCPPEVYAIMQGCWQREPQQRMVIKDIHSRLQ 279 (280)
T ss_pred cCc-----------------cCCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHHh
Confidence 000 00111234566789999999999999999999999886
No 106
>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2. Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly
Probab=100.00 E-value=1.6e-37 Score=325.11 Aligned_cols=255 Identities=23% Similarity=0.382 Sum_probs=203.8
Q ss_pred hccccccccCCCcceEEEEEEec------CCcEEEEEEeehhhh-HHHHHHHHHHHHHHhccCCccceeeeeeccCCeee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQLE-RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 573 (791)
.+|++.+.||+|+||.||+|... +++.||+|++..... ...+.+.+|+.++++++||||+++++++......+
T Consensus 5 ~~~~~~~~lg~G~~g~V~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~ 84 (283)
T cd05091 5 STVRFMEELGEDRFGKVYKGHLFGTAPGEQTQAVAIKTLKDKAEGPLREEFKHEAMMRSRLQHPNIVCLLGVVTKEQPLS 84 (283)
T ss_pred HHHHHHHHhCCCCCCeEEEEEEecCCCCCceeEEEEEEccCCCCHHHHHHHHHHHHHHhcCCCCCcCeEEEEEcCCCceE
Confidence 45778889999999999999863 257899999875543 33467889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC
Q 003855 574 LVLEFMPNGSLEKWLYSH---------------NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN 638 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~ 638 (791)
+++||+++++|.+++... ...+++..+..++.|++.||.|+| +.+|+||||||+||+++++
T Consensus 85 ~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ql~~aL~~lH----~~gi~H~dlkp~Nil~~~~ 160 (283)
T cd05091 85 MIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLEPADFVHIVTQIAAGMEFLS----SHHVVHKDLATRNVLVFDK 160 (283)
T ss_pred EEEEcCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----HcCccccccchhheEecCC
Confidence 999999999999998632 124788889999999999999999 6789999999999999999
Q ss_pred CcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHH
Q 003855 639 MAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRW 717 (791)
Q Consensus 639 ~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~ 717 (791)
+.+||+|||+++...............+++.|+|||.+.++.++.++|||||||++|||++ |..||.+... .++
T Consensus 161 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~-----~~~ 235 (283)
T cd05091 161 LNVKISDLGLFREVYAADYYKLMGNSLLPIRWMSPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSN-----QDV 235 (283)
T ss_pred CceEecccccccccccchheeeccCccCCccccCHHHHhcCCCCcchhHHHHHHHHHHHHcCCCCCCCCCCH-----HHH
Confidence 9999999999987644332222233446788999999988889999999999999999998 7788765321 111
Q ss_pred HHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 718 VKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 718 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
+........ .+.+..++..+.+++.+||+.+|++||++.+|++.|+.
T Consensus 236 ~~~i~~~~~--------------~~~~~~~~~~~~~li~~cl~~~p~~RP~~~~i~~~l~~ 282 (283)
T cd05091 236 IEMIRNRQV--------------LPCPDDCPAWVYTLMLECWNEFPSRRPRFKDIHSRLRT 282 (283)
T ss_pred HHHHHcCCc--------------CCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHhhC
Confidence 111111100 01122456778899999999999999999999999864
No 107
>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr
Probab=100.00 E-value=2.8e-37 Score=320.64 Aligned_cols=256 Identities=26% Similarity=0.477 Sum_probs=206.7
Q ss_pred hccccccccCCCcceEEEEEEec-CC---cEEEEEEeehh-hhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DG---TDVAIKIFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~---~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
.+|++.+.||+|+||.||+|... ++ ..||||++... .....+.+..|+.++++++||||+++++++.++...++|
T Consensus 4 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv 83 (269)
T cd05065 4 SCVKIEEVIGAGEFGEVCRGRLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSRPVMII 83 (269)
T ss_pred HHeEEEeEecCCCCCeEEEEEEecCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEECCCCceEEE
Confidence 45788999999999999999865 33 36999998754 244567899999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
|||+++|+|.+++......+++.++..++.|++.|+.||| +.+++||||||+||+++.++.+|++|||++..+...
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~i~~~l~~al~~lH----~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~ 159 (269)
T cd05065 84 TEFMENGALDSFLRQNDGQFTVIQLVGMLRGIAAGMKYLS----EMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDD 159 (269)
T ss_pred EecCCCCcHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccChheEEEcCCCcEEECCCccccccccC
Confidence 9999999999999876666899999999999999999999 678999999999999999999999999999866443
Q ss_pred CCcceeeccc---ccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 656 EDSVTQTMTM---ATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 656 ~~~~~~~~~~---g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
.......... .+..|+|||+..+..++.++|||||||++||+++ |..||..... .....++....
T Consensus 160 ~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~e~l~~g~~p~~~~~~--~~~~~~i~~~~--------- 228 (269)
T cd05065 160 TSDPTYTSSLGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSN--QDVINAIEQDY--------- 228 (269)
T ss_pred ccccccccccCCCcceeecCHhHhccCcccchhhhhhhHHHHHHHhcCCCCCCCCCCH--HHHHHHHHcCC---------
Confidence 2221111111 2457999999998999999999999999999887 9999865322 12222221110
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+.+.+++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 229 --------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 268 (269)
T cd05065 229 --------RLPPPMDCPTALHQLMLDCWQKDRNARPKFGQIVSTLDKM 268 (269)
T ss_pred --------cCCCcccCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0111224556788999999999999999999999998765
No 108
>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.3e-37 Score=325.97 Aligned_cols=262 Identities=24% Similarity=0.403 Sum_probs=209.2
Q ss_pred HhhccccccccCCCcceEEEEEEec--------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeecc
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS--------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSN 568 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 568 (791)
..++|.+.+.||+|+||.||+|+.. ++..||+|.+.... ....+.+.+|+.+++.+ +||||+++++++..
T Consensus 13 ~~~~~~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~ 92 (304)
T cd05101 13 SRDKLTLGKPLGEGCFGQVVMAEALGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQ 92 (304)
T ss_pred cHHHeeecceeeccCCceEEEEEEeccCCCCCCcceeEEeeecccccchHHHHHHHHHHHHHHhhccCCCchheeEEEec
Confidence 3578889999999999999999741 34579999886543 34456788999999999 89999999999999
Q ss_pred CCeeeEEEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCe
Q 003855 569 PDFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNI 633 (791)
Q Consensus 569 ~~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Ni 633 (791)
....++||||+++|+|.+++.... ..+++.++..++.||++||.||| +.+++||||||+||
T Consensus 93 ~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH----~~givH~dlkp~Ni 168 (304)
T cd05101 93 DGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDEQMTFKDLVSCTYQVARGMEYLA----SQKCIHRDLAARNV 168 (304)
T ss_pred CCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcccccHHHHHHHHHHHHHHHHHHH----HCCeeecccccceE
Confidence 999999999999999999997532 24788899999999999999999 67899999999999
Q ss_pred EeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcc
Q 003855 634 LLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEM 712 (791)
Q Consensus 634 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~ 712 (791)
++++++.+||+|||+++...............++..|+|||+..+..++.++||||||+++|||++ |..||....
T Consensus 169 li~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~---- 244 (304)
T cd05101 169 LVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP---- 244 (304)
T ss_pred EEcCCCcEEECCCccceecccccccccccCCCCCceeeCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCcccCC----
Confidence 999999999999999987654333222223345678999999988889999999999999999998 778876431
Q ss_pred hHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 713 SLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 713 ~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
...+........ ....+..++..+.+++.+||+.+|++||++.|+++.|+++..-.
T Consensus 245 -~~~~~~~~~~~~--------------~~~~~~~~~~~~~~li~~cl~~~p~~Rps~~e~l~~l~~~~~~~ 300 (304)
T cd05101 245 -VEELFKLLKEGH--------------RMDKPANCTNELYMMMRDCWHAIPSHRPTFKQLVEDLDRILTLT 300 (304)
T ss_pred -HHHHHHHHHcCC--------------cCCCCCCCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHHHHhh
Confidence 111111110000 00111245577889999999999999999999999999986543
No 109
>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the
Probab=100.00 E-value=6.4e-38 Score=338.61 Aligned_cols=253 Identities=24% Similarity=0.360 Sum_probs=204.7
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+|+.. +++.||||++.... ......+..|++++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (350)
T cd05573 1 DDFEVIKVIGRGAFGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSFQDEEHLYLVM 80 (350)
T ss_pred CCceEEEEEEeCCcEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhheecCCeEEEEE
Confidence 46889999999999999999975 78999999997653 234567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++... ..+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 e~~~~~~L~~~l~~~-~~l~~~~~~~i~~qi~~aL~~LH----~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~ 155 (350)
T cd05573 81 EYMPGGDLMNLLIRK-DVFPEETARFYIAELVLALDSVH----KLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAK 155 (350)
T ss_pred cCCCCCCHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccC
Confidence 999999999999876 44899999999999999999999 6899999999999999999999999999998765432
Q ss_pred ---------------------------CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCcccc
Q 003855 657 ---------------------------DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFT 709 (791)
Q Consensus 657 ---------------------------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~ 709 (791)
.........||+.|+|||++.+..++.++|||||||++|||++|+.||.....
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~Pf~~~~~ 235 (350)
T cd05573 156 DREYYLNDSHNLLFRDNVLVRRRDHKQRRVRANSTVGTPDYIAPEVLRGTPYGLECDWWSLGVILYEMLYGFPPFYSDTL 235 (350)
T ss_pred cccccccccccccccccccccccccccccccccccccCccccCHHHHcCCCCCCceeeEecchhhhhhccCCCCCCCCCH
Confidence 00112334689999999999999999999999999999999999999976321
Q ss_pred CcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCC-HHHHHHH
Q 003855 710 GEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRIN-VTDAAAK 775 (791)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt-~~ev~~~ 775 (791)
.+ ...+. ... .... ..+....++.++.+++.+|+. ||++||+ +.|+++.
T Consensus 236 ~~-~~~~i-~~~-~~~~-------------~~p~~~~~~~~~~~li~~ll~-dp~~R~~s~~~ll~h 285 (350)
T cd05573 236 QE-TYNKI-INW-KESL-------------RFPPDPPVSPEAIDLICRLLC-DPEDRLGSFEEIKSH 285 (350)
T ss_pred HH-HHHHH-hcc-CCcc-------------cCCCCCCCCHHHHHHHHHHcc-ChhhcCCCHHHHhcC
Confidence 11 11110 000 0000 001111245678899999997 9999999 9999873
No 110
>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,
Probab=100.00 E-value=1.4e-37 Score=327.33 Aligned_cols=259 Identities=26% Similarity=0.445 Sum_probs=206.8
Q ss_pred HhhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCC
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPD 570 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 570 (791)
..++|+..+.||+|+||.||+|... ....||+|++.... .+....+.+|+.+++++ +||||+++++++...+
T Consensus 10 ~~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~~~~~ 89 (293)
T cd05053 10 PRDRLTLGKPLGEGAFGQVVKAEAVGLDNPNETSTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGVCTQEG 89 (293)
T ss_pred CHhHeEEeeEecccccccEEEEEEecCCCCCCceeEEEEEccCCCCHHHHHHHHHHHHHHHhhcCCCCeeeEEEEEcCCC
Confidence 3467899999999999999999864 23679999887542 34456788999999999 8999999999999999
Q ss_pred eeeEEEecCCCCCHHHHHhhC---------------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEe
Q 003855 571 FKALVLEFMPNGSLEKWLYSH---------------NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILL 635 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~---------------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill 635 (791)
..++||||+++|+|.++++.. ...+++..+.+++.|++.|++||| +.+|+||||||+||++
T Consensus 90 ~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivH~dlkp~Nil~ 165 (293)
T cd05053 90 PLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEETLTQKDLVSFAYQVARGMEFLA----SKKCIHRDLAARNVLV 165 (293)
T ss_pred CeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHH----HCCccccccceeeEEE
Confidence 999999999999999999642 245889999999999999999999 6789999999999999
Q ss_pred CCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchH
Q 003855 636 DENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSL 714 (791)
Q Consensus 636 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~ 714 (791)
++++.+|++|||+++.+.............++..|+|||+..+..++.++|||||||++||+++ |..||...... ..
T Consensus 166 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~ 243 (293)
T cd05053 166 TEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIPVE--EL 243 (293)
T ss_pred cCCCeEEeCccccccccccccceeccCCCCCCccccCHHHhccCCcCcccceeehhhHHHHHhcCCCCCCCCCCHH--HH
Confidence 9999999999999987654332222222335678999999988899999999999999999998 88888653211 11
Q ss_pred HHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 715 RRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
.+...... ....+..++..+.+++.+|++.+|++|||+.|+++.|+.+.
T Consensus 244 ~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~eil~~l~~~~ 292 (293)
T cd05053 244 FKLLKEGY-----------------RMEKPQNCTQELYHLMRDCWHEVPSQRPTFKQLVEDLDRML 292 (293)
T ss_pred HHHHHcCC-----------------cCCCCCCCCHHHHHHHHHHcccCcccCcCHHHHHHHHHHhh
Confidence 11111100 00011234567889999999999999999999999998874
No 111
>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po
Probab=100.00 E-value=1.6e-37 Score=338.27 Aligned_cols=253 Identities=23% Similarity=0.300 Sum_probs=197.8
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
.|+.++.||+|+||.||+|+.. +++.||+|++.... ....+.+..|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~~~~~~~~lv~E 81 (381)
T cd05626 2 MFVKIKTLGIGAFGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMD 81 (381)
T ss_pred CceEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEEecCCEEEEEEe
Confidence 5788999999999999999864 78899999997543 3445678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|+++|+|.+++..... +++..+..++.||+.||+||| ..+|+||||||+||+++.++.+||+|||+++.+.....
T Consensus 82 ~~~gg~L~~~l~~~~~-~~e~~~~~~~~qi~~aL~~LH----~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~ 156 (381)
T cd05626 82 YIPGGDMMSLLIRMEV-FPEVLARFYIAELTLAIESVH----KMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHN 156 (381)
T ss_pred cCCCCcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH----hCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccc
Confidence 9999999999986543 788889999999999999999 67899999999999999999999999999864321100
Q ss_pred c---------------------------------------------ceeecccccccccCCCccCCCCCCccccHHhHHH
Q 003855 658 S---------------------------------------------VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGV 692 (791)
Q Consensus 658 ~---------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~ 692 (791)
. ......+||+.|+|||++.+..++.++|||||||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlG~ 236 (381)
T cd05626 157 SKYYQKGSHIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNYIAPEVLLRKGYTQLCDWWSVGV 236 (381)
T ss_pred cccccccccccccccCcccccccccccccccccchhhccccccccccccccccCCccccCHHHHcCCCCCCccceeehhh
Confidence 0 0011246999999999998888999999999999
Q ss_pred HHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhh--ccccCCCCCCCHH
Q 003855 693 LLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALD--CCIESPDMRINVT 770 (791)
Q Consensus 693 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~--cl~~~P~~RPt~~ 770 (791)
++|||+||+.||......+. ... +... .... ..+....++.++.+++.+ |+..+|..||++.
T Consensus 237 il~elltG~~Pf~~~~~~~~-~~~-i~~~-~~~~-------------~~~~~~~~s~~~~dli~~ll~~~~~~~~R~~~~ 300 (381)
T cd05626 237 ILFEMLVGQPPFLAPTPTET-QLK-VINW-ENTL-------------HIPPQVKLSPEAVDLITKLCCSAEERLGRNGAD 300 (381)
T ss_pred HHHHHHhCCCCCcCCCHHHH-HHH-HHcc-cccc-------------CCCCCCCCCHHHHHHHHHHccCcccccCCCCHH
Confidence 99999999999975322111 111 0000 0000 001111234567788887 5566777799999
Q ss_pred HHHHH
Q 003855 771 DAAAK 775 (791)
Q Consensus 771 ev~~~ 775 (791)
|+++.
T Consensus 301 ~~l~h 305 (381)
T cd05626 301 DIKAH 305 (381)
T ss_pred HHhcC
Confidence 99863
No 112
>PTZ00283 serine/threonine protein kinase; Provisional
Probab=100.00 E-value=2.8e-37 Score=344.81 Aligned_cols=256 Identities=26% Similarity=0.311 Sum_probs=204.0
Q ss_pred HHHhhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCC---
Q 003855 497 QRATDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPD--- 570 (791)
Q Consensus 497 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~--- 570 (791)
+...++|++.+.||+|+||.||+|+. .+|+.||||++.... ......+.+|+.++..++|+||+++.+.+...+
T Consensus 28 ~~~~~rY~i~~~LG~G~fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~ 107 (496)
T PTZ00283 28 KEQAKKYWISRVLGSGATGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRN 107 (496)
T ss_pred cccCCCEEEEEEEecCCCEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccC
Confidence 33457899999999999999999985 478999999986542 344567888999999999999999987764322
Q ss_pred -----eeeEEEecCCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEE
Q 003855 571 -----FKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAH 642 (791)
Q Consensus 571 -----~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~k 642 (791)
..++||||+++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.+|
T Consensus 108 ~~~~~~i~lV~Ey~~~gsL~~~l~~~~~~~~~l~e~~~~~i~~qll~aL~~lH----~~~IiHrDLKP~NILl~~~~~vk 183 (496)
T PTZ00283 108 PENVLMIALVLDYANAGDLRQEIKSRAKTNRTFREHEAGLLFIQVLLAVHHVH----SKHMIHRDIKSANILLCSNGLVK 183 (496)
T ss_pred cccceEEEEEEeCCCCCcHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEeCCCCEE
Confidence 367999999999999999743 345889999999999999999999 67899999999999999999999
Q ss_pred EeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc
Q 003855 643 VSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL 722 (791)
Q Consensus 643 l~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (791)
|+|||+++.+.............||+.|+|||++.+..++.++|||||||++|||++|+.||.... ....+....
T Consensus 184 L~DFGls~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~s~k~DVwSlGvilyeLltG~~Pf~~~~-----~~~~~~~~~ 258 (496)
T PTZ00283 184 LGDFGFSKMYAATVSDDVGRTFCGTPYYVAPEIWRRKPYSKKADMFSLGVLLYELLTLKRPFDGEN-----MEEVMHKTL 258 (496)
T ss_pred EEecccCeeccccccccccccccCCcceeCHHHhCCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCC-----HHHHHHHHh
Confidence 999999987654322222334568999999999999999999999999999999999999997521 112222111
Q ss_pred CCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 723 PHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 723 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..... +.+..++.++.+++.+||+.||++||++.++++.
T Consensus 259 ~~~~~--------------~~~~~~~~~l~~li~~~L~~dP~~RPs~~ell~~ 297 (496)
T PTZ00283 259 AGRYD--------------PLPPSISPEMQEIVTALLSSDPKRRPSSSKLLNM 297 (496)
T ss_pred cCCCC--------------CCCCCCCHHHHHHHHHHcccChhhCcCHHHHHhC
Confidence 11000 0112345678899999999999999999999763
No 113
>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase. Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor
Probab=100.00 E-value=6.2e-38 Score=335.44 Aligned_cols=252 Identities=21% Similarity=0.317 Sum_probs=202.8
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+|+.. +++.||+|++.... .+..+.+.+|+.+++.++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (330)
T cd05601 1 KDFDVKSLVGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAFQDKDNLYLVM 80 (330)
T ss_pred CCceEEEEEEeccCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEEecCCeEEEEE
Confidence 46889999999999999999865 78999999997653 234567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++.+....
T Consensus 81 e~~~~~~L~~~l~~~~~~l~~~~~~~~~~qi~~aL~~lH----~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~ 156 (330)
T cd05601 81 EYQPGGDLLSLLNRYEDQFDEDMAQFYLAELVLAIHSVH----QMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANK 156 (330)
T ss_pred CCCCCCCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCeEcccCchHheEECCCCCEEeccCCCCeECCCCC
Confidence 999999999999877566899999999999999999999 6789999999999999999999999999998765433
Q ss_pred CcceeecccccccccCCCccC------CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 657 DSVTQTMTMATIGYMAPEYGS------EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
.. ......||+.|+|||++. ...++.++|||||||++|||++|+.||...... ..+....... ..
T Consensus 157 ~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~~~--~~- 227 (330)
T cd05601 157 MV-NSKLPVGTPDYIAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSA-----KTYNNIMNFQ--RF- 227 (330)
T ss_pred ce-eeecccCCccccCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHH-----HHHHHHHcCC--Cc-
Confidence 22 223346899999999876 456889999999999999999999999653211 1111110000 00
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...+....++..+.+++..|++ +|++||++.++++
T Consensus 228 --------~~~~~~~~~~~~~~~li~~ll~-~p~~R~t~~~l~~ 262 (330)
T cd05601 228 --------LKFPEDPKVSSDFLDLIQSLLC-GQKERLGYEGLCC 262 (330)
T ss_pred --------cCCCCCCCCCHHHHHHHHHHcc-ChhhCCCHHHHhC
Confidence 0001111244667899999998 9999999999875
No 114
>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=3.5e-37 Score=327.20 Aligned_cols=266 Identities=23% Similarity=0.401 Sum_probs=209.9
Q ss_pred hhccccccccCCCcceEEEEEEec--------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS--------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNP 569 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 569 (791)
.++|.+.+.||+|+||.||+|+.. ....||+|.+.... ......+..|+.+++++ +||||+++++++.+.
T Consensus 11 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~ 90 (314)
T cd05099 11 RDRLVLGKPLGEGCFGQVVRAEAYGIDKSRPDQTVTVAVKMLKDNATDKDLADLISEMELMKLIGKHKNIINLLGVCTQE 90 (314)
T ss_pred HHHeeeeeeecCCCcccEEEeeecccCCccCCcceEEEEEecCCCCChHHHHHHHHHHHHHHhccCCCCeeeEEEEEccC
Confidence 367889999999999999999742 34579999887543 34456788999999999 699999999999988
Q ss_pred CeeeEEEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeE
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNIL 634 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nil 634 (791)
...++||||+++|+|.+++.... ..+++.++.+++.|++.||.||| +.+++||||||+||+
T Consensus 91 ~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH----~~gi~H~dlkp~Nil 166 (314)
T cd05099 91 GPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQLSFKDLVSCAYQVARGMEYLE----SRRCIHRDLAARNVL 166 (314)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccccCHHHHHHHHHHHHHHHHHHH----HCCeeeccccceeEE
Confidence 89999999999999999997532 34788999999999999999999 679999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcch
Q 003855 635 LDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMS 713 (791)
Q Consensus 635 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~ 713 (791)
+++++.+||+|||+++...............++..|+|||.+.++.++.++|||||||++|||++ |..||..... ..
T Consensus 167 l~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~--~~ 244 (314)
T cd05099 167 VTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKWMAPEALFDRVYTHQSDVWSFGILMWEIFTLGGSPYPGIPV--EE 244 (314)
T ss_pred EcCCCcEEEccccccccccccccccccccCCCCccccCHHHHccCCcCccchhhHHHHHHHHHHhCCCCCCCCCCH--HH
Confidence 99999999999999987643322211122234567999999988899999999999999999999 8888865321 11
Q ss_pred HHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHhccccc
Q 003855 714 LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKFLDDAS 788 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~~~~~~ 788 (791)
....+... .. ...+..++.++.+++.+|++.+|++||++.|+++.|.++.....+++.
T Consensus 245 ~~~~~~~~---~~--------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~~ll~~l~~~~~~~~~~~~ 302 (314)
T cd05099 245 LFKLLREG---HR--------------MDKPSNCTHELYMLMRECWHAVPTQRPTFKQLVEALDKVLAAVSEEYL 302 (314)
T ss_pred HHHHHHcC---CC--------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHHHHHHhcCCce
Confidence 11111110 00 001123456788999999999999999999999999999876655543
No 115
>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in
Probab=100.00 E-value=2.5e-37 Score=329.28 Aligned_cols=241 Identities=23% Similarity=0.307 Sum_probs=193.7
Q ss_pred cccCCCcceEEEEEEe----cCCcEEEEEEeehhh----hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 507 NLLGTGSFGSVYKGTI----SDGTDVAIKIFNLQL----ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+.||+|+||.||+++. .+++.||||++.... ......+..|+.++++++||||+++++++...+..++||||
T Consensus 2 ~~lg~G~~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~e~ 81 (323)
T cd05584 2 KVLGKGGYGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAFQTGGKLYLILEY 81 (323)
T ss_pred ceeeecCCeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEEecCCeEEEEEeC
Confidence 5799999999999985 357899999987542 22345677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++|+|.+++...+. +.+..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 82 ~~~~~L~~~~~~~~~-~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~- 155 (323)
T cd05584 82 LSGGELFMHLEREGI-FMEDTACFYLSEISLALEHLH----QQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGT- 155 (323)
T ss_pred CCCchHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCC-
Confidence 999999999976543 778888899999999999999 67899999999999999999999999999975432221
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
......|++.|+|||++.+..++.++|||||||++|||++|+.||...... ..+.......
T Consensus 156 -~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~ell~G~~pf~~~~~~-----~~~~~~~~~~------------- 216 (323)
T cd05584 156 -VTHTFCGTIEYMAPEILMRSGHGKAVDWWSLGALMYDMLTGAPPFTAENRK-----KTIDKILKGK------------- 216 (323)
T ss_pred -cccccCCCccccChhhccCCCCCCcceecccHHHHHHHhcCCCCCCCCCHH-----HHHHHHHcCC-------------
Confidence 122346899999999998888999999999999999999999999753211 1111111000
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRI-----NVTDAAA 774 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~ 774 (791)
...+..++..+.+++.+|++.+|++|| ++.++++
T Consensus 217 --~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~l~~ 255 (323)
T cd05584 217 --LNLPPYLTPEARDLLKKLLKRNPSSRLGAGPGDAAEVQS 255 (323)
T ss_pred --CCCCCCCCHHHHHHHHHHcccCHhHcCCCCCCCHHHHhc
Confidence 001112345678999999999999999 7887765
No 116
>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase. Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well
Probab=100.00 E-value=1.7e-37 Score=323.68 Aligned_cols=256 Identities=25% Similarity=0.390 Sum_probs=202.7
Q ss_pred HhhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCe
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDF 571 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 571 (791)
..++|.+.+.||+|+||.||+|.+. .+..||+|.+.... ......+..|+.++++++||||+++++++.+...
T Consensus 4 ~~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (277)
T cd05036 4 PRDSITLLRALGHGAFGEVYEGLYRGRDGDAVELQVAVKTLPESCSEQDESDFLMEALIMSKFNHQNIVRLIGVSFERLP 83 (277)
T ss_pred CHHHcEeeeECCCCCCCcEEEEEEecCCCCCCceeEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEccCCC
Confidence 3577999999999999999999875 35678999876443 3334578889999999999999999999998888
Q ss_pred eeEEEecCCCCCHHHHHhhCC------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC---cEE
Q 003855 572 KALVLEFMPNGSLEKWLYSHN------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM---AAH 642 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~---~~k 642 (791)
.++||||+++|+|.+++.... ..+++..+.+++.||+.|++||| +.+++||||||+||+++.++ .+|
T Consensus 84 ~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~nil~~~~~~~~~~k 159 (277)
T cd05036 84 RFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCARDVAKGCKYLE----ENHFIHRDIAARNCLLTCKGPGRVAK 159 (277)
T ss_pred cEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccchheEEEeccCCCcceE
Confidence 999999999999999997543 24889999999999999999999 67899999999999998754 599
Q ss_pred EeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHh
Q 003855 643 VSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKES 721 (791)
Q Consensus 643 l~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 721 (791)
++|||+++................+..|+|||++.++.++.++|||||||++|||++ |..||+..... .....+...
T Consensus 160 l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~~g~~pf~~~~~~--~~~~~~~~~ 237 (277)
T cd05036 160 IADFGMARDIYRASYYRKGGRAMLPIKWMPPEAFLDGIFTSKTDVWSFGVLLWEIFSLGYMPYPGRTNQ--EVMEFVTGG 237 (277)
T ss_pred eccCccccccCCccceecCCCCCccHhhCCHHHHhcCCcCchhHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcC
Confidence 999999987643222111222234568999999988899999999999999999997 99998753221 111111110
Q ss_pred cCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 722 LPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 722 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
.. ...+..++..+.+++.+|++.+|++||++.+|++.|.
T Consensus 238 ~~-----------------~~~~~~~~~~~~~~i~~cl~~~p~~Rps~~~vl~~l~ 276 (277)
T cd05036 238 GR-----------------LDPPKGCPGPVYRIMTDCWQHTPEDRPNFATILERIQ 276 (277)
T ss_pred Cc-----------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHhh
Confidence 00 0011234567889999999999999999999999875
No 117
>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla
Probab=100.00 E-value=4.4e-37 Score=322.95 Aligned_cols=265 Identities=24% Similarity=0.315 Sum_probs=195.1
Q ss_pred hccccccccCCCcceEEEEEEec--CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhc---cCCccceeeeeec-----c
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS--DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNV---RHRNLIKILSSCS-----N 568 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~-----~ 568 (791)
++|++.+.||+|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.+ +||||+++++++. .
T Consensus 1 ~~Y~~~~~lg~G~~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~~~~~ 80 (290)
T cd07862 1 QQYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVSRTDR 80 (290)
T ss_pred CCcceeeEeccCCCeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecccCCC
Confidence 36889999999999999999863 46889999886543 22234455677777665 6999999999874 3
Q ss_pred CCeeeEEEecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeec
Q 003855 569 PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFG 647 (791)
Q Consensus 569 ~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 647 (791)
....++||||+. ++|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||
T Consensus 81 ~~~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~i~~qi~~aL~~lH----~~~iiH~dlkp~Nil~~~~~~~kl~Dfg 155 (290)
T cd07862 81 ETKLTLVFEHVD-QDLTTYLDKVPEPGVPTETIKDMMFQLLRGLDFLH----SHRVVHRDLKPQNILVTSSGQIKLADFG 155 (290)
T ss_pred CCcEEEEEccCC-CCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEEcCCCCEEEcccc
Confidence 456889999996 6999999754 345899999999999999999999 6789999999999999999999999999
Q ss_pred cccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc---CC
Q 003855 648 ISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL---PH 724 (791)
Q Consensus 648 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~---~~ 724 (791)
+++..... .......|+..|+|||.+.+..++.++|||||||++|||++|+.||.+.... ..+...+.... +.
T Consensus 156 ~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~-~~~~~i~~~~~~~~~~ 231 (290)
T cd07862 156 LARIYSFQ---MALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDV-DQLGKILDVIGLPGEE 231 (290)
T ss_pred ceEeccCC---cccccccccccccChHHHhCCCCCCccchHHHHHHHHHHHcCCCCcCCCCHH-HHHHHHHHHhCCCChh
Confidence 99876433 1223346899999999998888999999999999999999999999763221 11111111110 00
Q ss_pred Chhhhc---chhhhhhHH--hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 725 GLTEVV---DANLVREEQ--AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 725 ~~~~~~---d~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...... ...+..... .......++..+.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 286 (290)
T cd07862 232 DWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRISAYSALS 286 (290)
T ss_pred hchhhhcccchhccCCCCCCHHHHccCCCHHHHHHHHHHhccCchhcCCHHHHhc
Confidence 000000 000000000 00001134567789999999999999999999985
No 118
>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N. Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved
Probab=100.00 E-value=2.4e-37 Score=329.65 Aligned_cols=244 Identities=21% Similarity=0.258 Sum_probs=193.2
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHH---HhccCCccceeeeeeccCCeeeEE
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVL---RNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l---~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
|++.+.||+|+||.||+|... +++.||||++.... ....+.+..|++++ +.++||||+++++++.+.+..++|
T Consensus 1 y~i~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~~~~~~~~lv 80 (324)
T cd05589 1 FRCLAVLGRGHFGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACFQTEDHVCFV 80 (324)
T ss_pred CeEEEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEEEcCCEEEEE
Confidence 567889999999999999865 78999999997543 23345566666655 456899999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
|||+++|+|..+++.. .+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++.....
T Consensus 81 ~E~~~~~~L~~~~~~~--~l~~~~~~~~~~qi~~al~~lH----~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~ 154 (324)
T cd05589 81 MEYAAGGDLMMHIHTD--VFSEPRAVFYAACVVLGLQYLH----ENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGF 154 (324)
T ss_pred EcCCCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHH----hCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCC
Confidence 9999999999988653 4899999999999999999999 678999999999999999999999999998754322
Q ss_pred CCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
. .......|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ..........
T Consensus 155 ~--~~~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~~G~~pf~~~~~~-----~~~~~i~~~~---------- 217 (324)
T cd05589 155 G--DRTSTFCGTPEFLAPEVLTETSYTRAVDWWGLGVLIYEMLVGESPFPGDDEE-----EVFDSIVNDE---------- 217 (324)
T ss_pred C--CcccccccCccccCHhHhcCCCCCcccchhhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHhCC----------
Confidence 1 1223356899999999999889999999999999999999999999753211 1111100000
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRI-----NVTDAAA 774 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~ 774 (791)
...+..++..+.+++.+|++.||++|| ++.++++
T Consensus 218 -----~~~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~l~~ 256 (324)
T cd05589 218 -----VRYPRFLSREAISIMRRLLRRNPERRLGSGEKDAEDVKK 256 (324)
T ss_pred -----CCCCCCCCHHHHHHHHHHhhcCHhHcCCCCCCCHHHHhh
Confidence 001112456678999999999999999 4556554
No 119
>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.
Probab=100.00 E-value=6.5e-37 Score=317.53 Aligned_cols=258 Identities=24% Similarity=0.329 Sum_probs=208.2
Q ss_pred hccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+|+. .+++.||||.+.... ......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 2 ~~y~~~~~ig~g~~g~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~ 81 (267)
T cd08229 2 ANFRIEKKIGRGQFSEVYRATCLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVL 81 (267)
T ss_pred chhhhhhhhcccCCeEEEEEeecCCCceEEEEeeeehhhhhHHHHHHHHHHHHHHHHccCCchhhhhheeEeCCeEEEEE
Confidence 4688889999999999999996 488999999876432 334467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 577 EFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 577 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
||+++++|.+++.. ....+++..+..++.|++.|+.||| +.+++|+||||+||+++.++.++++|||++..+.
T Consensus 82 e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~ 157 (267)
T cd08229 82 ELADAGDLSRMIKHFKKQKRLIPEKTVWKYFVQLCSALEHMH----SRRVMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred EecCCCCHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCCEEECcchhhhccc
Confidence 99999999999873 2345899999999999999999999 6789999999999999999999999999998764
Q ss_pred CCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
.... ......++..|+|||+..+..++.++||||||+++|||++|..||...... ...+........ .+.
T Consensus 158 ~~~~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~---~~~~~~~~~~~~-----~~~ 227 (267)
T cd08229 158 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDKMN---LYSLCKKIEQCD-----YPP 227 (267)
T ss_pred cCCc--ccccccCCcCccCHHHhcCCCccchhhHHHHHHHHHHHHhCCCCcccccch---HHHHhhhhhcCC-----CCC
Confidence 3322 112345888999999998888999999999999999999999998643221 111111110000 000
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
. ....++..+.+++.+||+.+|++||||.+|+++++++.
T Consensus 228 ~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~i~~~~~~~~ 266 (267)
T cd08229 228 L--------PSDHYSEELRQLVNMCINPDPEKRPDITYVYDVAKRMH 266 (267)
T ss_pred C--------CcccccHHHHHHHHHhcCCCcccCCCHHHHHHHHhhhc
Confidence 0 01135567889999999999999999999999999874
No 120
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.1e-41 Score=336.71 Aligned_cols=391 Identities=29% Similarity=0.460 Sum_probs=296.1
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCc
Q 003855 4 QIPTEIGNLQNLQYLVFAENNLSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSIT 83 (791)
Q Consensus 4 ~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 83 (791)
++|++++++..++.|+.|+|+++ .+|+++..+.+|+.|++++|.+. ++|+.+++ +-.|+.|+..+|+|+ ..|..+.
T Consensus 82 ~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~-~~~l~dl~~~~N~i~-slp~~~~ 157 (565)
T KOG0472|consen 82 QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGR-LLDLEDLDATNNQIS-SLPEDMV 157 (565)
T ss_pred hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHH-Hhhhhhhhccccccc-cCchHHH
Confidence 57889999999999999999997 67888999999999999999998 88888888 458899999999998 6788888
Q ss_pred CCCCCCEEeccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChhhh
Q 003855 84 NATKLVALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPVIG 163 (791)
Q Consensus 84 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 163 (791)
++.+|..|++.+|+++..+++.+. ++.|++|+...|-++++| +.++++.+|..|+|..|+|. .+| .|.
T Consensus 158 ~~~~l~~l~~~~n~l~~l~~~~i~-m~~L~~ld~~~N~L~tlP---------~~lg~l~~L~~LyL~~Nki~-~lP-ef~ 225 (565)
T KOG0472|consen 158 NLSKLSKLDLEGNKLKALPENHIA-MKRLKHLDCNSNLLETLP---------PELGGLESLELLYLRRNKIR-FLP-EFP 225 (565)
T ss_pred HHHHHHHhhccccchhhCCHHHHH-HHHHHhcccchhhhhcCC---------hhhcchhhhHHHHhhhcccc-cCC-CCC
Confidence 888888899999988877776666 888888888888888765 44566666666666666666 334 343
Q ss_pred hhhhhhhhhhcccccccccCCcc-ccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCc
Q 003855 164 NFSASLQKFYAYECKLKGNIPQE-IGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMF 242 (791)
Q Consensus 164 ~~~~~L~~L~l~~n~l~~~~~~~-~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 242 (791)
.+ ..|.+|++..|.+. .+|.+ ..++.+|..|||++|+++ ..|+.+.-+.+|++||+|+|.|+ ..|..++++ .|+
T Consensus 226 gc-s~L~Elh~g~N~i~-~lpae~~~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~ 300 (565)
T KOG0472|consen 226 GC-SLLKELHVGENQIE-MLPAEHLKHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLK 300 (565)
T ss_pred cc-HHHHHHHhcccHHH-hhHHHHhcccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eee
Confidence 33 34666666666666 33333 346666666666666666 55666666666666666666666 455666666 666
Q ss_pred eEEecCCccCC----------------------------------------------------------------CCCcc
Q 003855 243 GIRLTGNKLSG----------------------------------------------------------------HIPPC 258 (791)
Q Consensus 243 ~L~L~~N~i~~----------------------------------------------------------------~~~~~ 258 (791)
.|-+.+|.+.. .+|+.
T Consensus 301 ~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdE 380 (565)
T KOG0472|consen 301 FLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDE 380 (565)
T ss_pred ehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHH
Confidence 66666665430 12221
Q ss_pred ccCCCC---CcEEEcCCCcCCCCCCccccCCCCCCe-EEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhcc
Q 003855 259 LVSLTS---LRELHLGSNKLTSSIPSSLWSLEYILD-INLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGAL 334 (791)
Q Consensus 259 ~~~l~~---L~~L~L~~N~l~~~~~~~~~~l~~L~~-L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 334 (791)
...... .+..+++.|++. .+|..+..+..+.+ +.+++|.+ +.+|..++.+++|+.|+|++|.+. .+|..++.+
T Consensus 381 Vfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~l 457 (565)
T KOG0472|consen 381 VFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSL 457 (565)
T ss_pred HHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhh
Confidence 111111 445666666665 45555555544433 45555555 477888899999999999999998 789999999
Q ss_pred ccccccccccccCCCCCCcccCCCCCCcEEEccCCccCCCCchhhhhcccCceEEccCCCCcccCCCCCCCcCCcccccc
Q 003855 335 KDLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQLKQFNVSHNRLEGEIPVKGSFKNFSVESFF 414 (791)
Q Consensus 335 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~ 414 (791)
..|+.|+++.|+|. .+|..+..+..|+.+-.++|++....|+.+.+|.+|..|||.+|.+...+|..|.+.+++.+.+.
T Consensus 458 v~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~LgnmtnL~hLeL~ 536 (565)
T KOG0472|consen 458 VRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPILGNMTNLRHLELD 536 (565)
T ss_pred hhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChhhccccceeEEEec
Confidence 99999999999999 88998888888888888899999777888999999999999999999999999999999999999
Q ss_pred CCccc
Q 003855 415 GNYAL 419 (791)
Q Consensus 415 ~n~~~ 419 (791)
|||+.
T Consensus 537 gNpfr 541 (565)
T KOG0472|consen 537 GNPFR 541 (565)
T ss_pred CCccC
Confidence 99986
No 121
>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors. Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept
Probab=100.00 E-value=9.7e-37 Score=321.57 Aligned_cols=259 Identities=23% Similarity=0.375 Sum_probs=206.9
Q ss_pred HhhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCC
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPD 570 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 570 (791)
..++|+..+.||+|+||.||+|... ++..||||++.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 33 ~~~~~~~~~~ig~G~~g~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 112 (302)
T cd05055 33 PRNNLSFGKTLGAGAFGKVVEATAYGLSKSDAVMKVAVKMLKPTAHSSEREALMSELKIMSHLGNHENIVNLLGACTIGG 112 (302)
T ss_pred cHHHeEEcceeeccCCeeEEEEEEecCCCCCceeEEEEEecCccCChHHHHHHHHHHHHHHhccCCCCcceEEEEEecCC
Confidence 3468999999999999999999741 35579999887543 34456788999999999 7999999999999999
Q ss_pred eeeEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 571 FKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
..++||||+++|+|.++++... ..+++.++..++.|++.|+.||| +.+++|+||||+||+++.++.++++|||++
T Consensus 113 ~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~~~i~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~ 188 (302)
T cd05055 113 PILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFSYQVAKGMAFLA----SKNCIHRDLAARNVLLTHGKIVKICDFGLA 188 (302)
T ss_pred ceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeehhhhccceEEEcCCCeEEECCCccc
Confidence 9999999999999999998543 34899999999999999999999 678999999999999999999999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhh
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTE 728 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (791)
+...............++..|+|||.+.++.++.++|||||||++|||++ |..||......+ ...+.+......
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DiwslGvil~el~t~g~~p~~~~~~~~-~~~~~~~~~~~~---- 263 (302)
T cd05055 189 RDIMNDSNYVVKGNARLPVKWMAPESIFNCVYTFESDVWSYGILLWEIFSLGSNPYPGMPVDS-KFYKLIKEGYRM---- 263 (302)
T ss_pred ccccCCCceeecCCCCcccccCCHhhhccCCCCcHhHHHHHHHHHHHHHhCCCCCcCCCCchH-HHHHHHHcCCcC----
Confidence 87644332222222345678999999988899999999999999999998 999986532211 111111110000
Q ss_pred hcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 729 VVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 729 ~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+...+.++.+++.+|++.+|++||++.|+++.|+++
T Consensus 264 -------------~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ell~~l~~~ 301 (302)
T cd05055 264 -------------AQPEHAPAEIYDIMKTCWDADPLKRPTFKQIVQLIGKQ 301 (302)
T ss_pred -------------CCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHHhh
Confidence 00112345688999999999999999999999999874
No 122
>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-37 Score=326.80 Aligned_cols=261 Identities=26% Similarity=0.413 Sum_probs=207.1
Q ss_pred hhccccccccCCCcceEEEEEEec--------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS--------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNP 569 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 569 (791)
.++|.+.+.||+|+||.||+|+.. ++..||+|.+.... ......+..|+.+++.+ +||||+++++++...
T Consensus 17 ~~~~~i~~~lg~G~~g~V~~~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~ 96 (307)
T cd05098 17 RDRLVLGKPLGEGCFGQVVMAEAIGLDKEKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQD 96 (307)
T ss_pred hHHeEEeeeeccCCCeeEEEeEEeccCCcccCccceEEEEeccCCCChHHHHHHHHHHHHHHHhcCCCCEeeEEEEEecC
Confidence 367999999999999999999752 23569999987543 34456788899999999 799999999999999
Q ss_pred CeeeEEEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeE
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNIL 634 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nil 634 (791)
+..++||||+++|+|.+++.... ..+++.++.+++.|++.||+||| +.+++||||||+||+
T Consensus 97 ~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~aL~~lH----~~gi~H~dlkp~Nil 172 (307)
T cd05098 97 GPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQLSFKDLVSCAYQVARGMEYLA----SKKCIHRDLAARNVL 172 (307)
T ss_pred CceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH----HCCcccccccHHheE
Confidence 99999999999999999998532 24788999999999999999999 678999999999999
Q ss_pred eCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcch
Q 003855 635 LDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMS 713 (791)
Q Consensus 635 l~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~ 713 (791)
+++++.+||+|||.++...............++..|+|||.+.+..++.++|||||||++|||++ |..||..... ..
T Consensus 173 l~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~el~~~g~~p~~~~~~--~~ 250 (307)
T cd05098 173 VTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPV--EE 250 (307)
T ss_pred EcCCCcEEECCCcccccccccchhhccccCCCccceeChHHhccCCCCcHHHHHHHHHHHHHHHcCCCCCCCcCCH--HH
Confidence 99999999999999976543222111122234568999999988889999999999999999998 8888864211 11
Q ss_pred HHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 714 LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
..+.+.... ....+..++.++.+++.+|++.+|++||++.++++.|.++.+..
T Consensus 251 ~~~~~~~~~-----------------~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~evl~~l~~~~~~~ 303 (307)
T cd05098 251 LFKLLKEGH-----------------RMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRILALT 303 (307)
T ss_pred HHHHHHcCC-----------------CCCCCCcCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHHHHh
Confidence 111111100 00111234567889999999999999999999999999987653
No 123
>PHA03212 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=1e-36 Score=331.19 Aligned_cols=261 Identities=20% Similarity=0.213 Sum_probs=197.8
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.+|++.+.||+|+||.||+|... +++.||+|... ...+.+|++++++++||||+++++++......++|+|++
T Consensus 92 ~~y~~~~~lg~G~~g~V~~~~d~~~~~~vaiK~~~------~~~~~~E~~il~~l~HpnIv~~~~~~~~~~~~~lv~e~~ 165 (391)
T PHA03212 92 AGFSILETFTPGAEGFAFACIDNKTCEHVVIKAGQ------RGGTATEAHILRAINHPSIIQLKGTFTYNKFTCLILPRY 165 (391)
T ss_pred CCcEEEEEEcCCCCeEEEEEEECCCCCEEEEechh------hhhhHHHHHHHHhCCCCCCCCEeEEEEECCeeEEEEecC
Confidence 57999999999999999999864 78899999643 234678999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
. ++|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+....... .
T Consensus 166 ~-~~L~~~l~~~~-~l~~~~~~~i~~qi~~aL~ylH----~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~-~ 238 (391)
T PHA03212 166 K-TDLYCYLAAKR-NIAICDILAIERSVLRAIQYLH----ENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINA-N 238 (391)
T ss_pred C-CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccc-c
Confidence 4 79999887654 4889999999999999999999 67899999999999999999999999999975432211 1
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCcccc------CcchHHHHHHHhc------CCChh
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFT------GEMSLRRWVKESL------PHGLT 727 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~------~~~~~~~~~~~~~------~~~~~ 727 (791)
......||+.|+|||++.+..++.++|||||||++|||++|+.|+..... ....+...+.... +....
T Consensus 239 ~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p~~~~~~~~ 318 (391)
T PHA03212 239 KYYGWAGTIATNAPELLARDPYGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHPNEFPIDAQ 318 (391)
T ss_pred ccccccCccCCCChhhhcCCCCCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCChhhcCcchh
Confidence 22234689999999999988999999999999999999999987643211 0111111111110 00000
Q ss_pred hhcchhhhhh----------HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 728 EVVDANLVRE----------EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 728 ~~~d~~~~~~----------~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..++...... ..........+.++.+++.+|++.||++|||+.|+++
T Consensus 319 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~Li~~mL~~dP~~Rpta~elL~ 375 (391)
T PHA03212 319 ANLDEIYIGLAKKSSRKPGSRPLWTNLYELPIDLEYLICKMLAFDAHHRPSAEALLD 375 (391)
T ss_pred HHHHHHHHHHHhccCCCCCCCCCHHHHhhhhhhHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000000000 0000111235667899999999999999999999985
No 124
>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl. Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor
Probab=100.00 E-value=4.3e-37 Score=319.84 Aligned_cols=253 Identities=26% Similarity=0.467 Sum_probs=197.7
Q ss_pred ccccccCCCcceEEEEEEecC-Cc--EEEEEEeehh--hhHHHHHHHHHHHHHHhccCCccceeeeeeccC------Cee
Q 003855 504 NECNLLGTGSFGSVYKGTISD-GT--DVAIKIFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSCSNP------DFK 572 (791)
Q Consensus 504 ~~~~~ig~G~~g~Vy~~~~~~-~~--~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~ 572 (791)
.+.+.||+|+||.||+|++.+ ++ .||+|.++.. .....+.+..|+.+++.++||||+++++++... ...
T Consensus 2 ~i~~~ig~G~~g~V~~~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~ 81 (272)
T cd05075 2 ALGKTLGEGEFGSVMEGQLNQDDSILKVAVKTMKIAICTRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVESEGYPSP 81 (272)
T ss_pred ccccccCcccCceEEEeEEccCCCeeeEEEEecccCcCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCcccCCCCc
Confidence 456789999999999999753 33 5899987654 234467788999999999999999999987432 246
Q ss_pred eEEEecCCCCCHHHHHhh-----CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeec
Q 003855 573 ALVLEFMPNGSLEKWLYS-----HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFG 647 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~-----~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 647 (791)
++||||+++|+|.+++.. ....+++..+..++.|++.||+||| .++|+||||||+||++++++.+||+|||
T Consensus 82 ~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~Dfg 157 (272)
T cd05075 82 VVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKFMTDIASGMEYLS----SKSFIHRDLAARNCMLNENMNVCVADFG 157 (272)
T ss_pred EEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhheEEcCCCCEEECCCC
Confidence 899999999999998852 2234789999999999999999999 6789999999999999999999999999
Q ss_pred cccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCCh
Q 003855 648 ISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGL 726 (791)
Q Consensus 648 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 726 (791)
+++.+.............+++.|+|||+..+..++.++||||||+++|||++ |+.||...... .....+.... .
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~--~- 232 (272)
T cd05075 158 LSKKIYNGDYYRQGRIAKMPVKWIAIESLADRVYTTKSDVWSFGVTMWEIATRGQTPYPGVENS--EIYDYLRQGN--R- 232 (272)
T ss_pred cccccCcccceecCCcccCCcccCCHHHccCCCcChHHHHHHHHHHHHHHHcCCCCCCCCCCHH--HHHHHHHcCC--C-
Confidence 9987654332222223346778999999998899999999999999999999 78888653211 1111111100 0
Q ss_pred hhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 727 TEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 727 ~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
......++..+.+++.+||+.+|++|||+.++++.|+++
T Consensus 233 --------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~~~ 271 (272)
T cd05075 233 --------------LKQPPDCLDGLYSLMSSCWLLNPKDRPSFETLRCELEKA 271 (272)
T ss_pred --------------CCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 001113456678999999999999999999999999875
No 125
>KOG0599 consensus Phosphorylase kinase gamma subunit [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.6e-38 Score=295.69 Aligned_cols=252 Identities=29% Similarity=0.392 Sum_probs=206.7
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--------hHHHHHHHHHHHHHHhc-cCCccceeeeeecc
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--------ERAFRSFDSECEVLRNV-RHRNLIKILSSCSN 568 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~ 568 (791)
.-..|...+.+|.|..++|.++..+ +|..+|+|++.... .+..++-.+|+.+++++ .||+|+++.++++.
T Consensus 15 fy~~y~pkeilgrgvss~vrRci~k~t~~e~a~kii~~~at~~~~e~~~~~~EaT~~Ev~ILRqv~GHP~II~l~D~yes 94 (411)
T KOG0599|consen 15 FYAKYEPKEILGRGVSSVVRRCIHKETGKEFAVKIIDVTATTESGETPYEMREATRQEISILRQVMGHPYIIDLQDVYES 94 (411)
T ss_pred HHhhcChHHHhcccchhhhhhhhhcccccceeEEEEEecccccCCccHHHHHHHHHHHHHHHHHhcCCCcEEEeeeeccC
Confidence 3456788889999999999998765 78899999885432 33455677899999998 69999999999999
Q ss_pred CCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecc
Q 003855 569 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGI 648 (791)
Q Consensus 569 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgl 648 (791)
+...++|+|.|+.|.|.|++.+.-. +++.+..+|++|+..|++||| ...|||||+||+|||+|++.++||+|||+
T Consensus 95 ~sF~FlVFdl~prGELFDyLts~Vt-lSEK~tR~iMrqlfegVeylH----a~~IVHRDLKpENILlddn~~i~isDFGF 169 (411)
T KOG0599|consen 95 DAFVFLVFDLMPRGELFDYLTSKVT-LSEKETRRIMRQLFEGVEYLH----ARNIVHRDLKPENILLDDNMNIKISDFGF 169 (411)
T ss_pred cchhhhhhhhcccchHHHHhhhhee-ecHHHHHHHHHHHHHHHHHHH----HhhhhhcccChhheeeccccceEEeccce
Confidence 9999999999999999999987644 888999999999999999999 77899999999999999999999999999
Q ss_pred ccccCCCCCcceeecccccccccCCCccC------CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc
Q 003855 649 SKLLGEGEDSVTQTMTMATIGYMAPEYGS------EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL 722 (791)
Q Consensus 649 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~------~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (791)
|+.+.+++. ....+||++|+|||.+. ...|+..+|+||.|||||.++.|.+||.. .....+.+.+..
T Consensus 170 a~~l~~Gek---LrelCGTPgYLAPEtikC~m~e~~pGYs~EVD~Wa~GVImyTLLaGcpPFwH--RkQmlMLR~Ime-- 242 (411)
T KOG0599|consen 170 ACQLEPGEK---LRELCGTPGYLAPETIKCSMYENHPGYSKEVDEWACGVIMYTLLAGCPPFWH--RKQMLMLRMIME-- 242 (411)
T ss_pred eeccCCchh---HHHhcCCCcccChhheeeecccCCCCccchhhHHHHHHHHHHHHcCCCchhH--HHHHHHHHHHHh--
Confidence 998876653 33468999999999654 24588899999999999999999999964 222222221111
Q ss_pred CCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 723 PHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 723 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+-.+ -..+++.+++....++|.+|++.||++|.|++|+++
T Consensus 243 --Gkyq----------F~speWadis~~~KdLIsrlLqVdp~~Ritake~La 282 (411)
T KOG0599|consen 243 --GKYQ----------FRSPEWADISATVKDLISRLLQVDPTKRITAKEALA 282 (411)
T ss_pred --cccc----------cCCcchhhccccHHHHHHHHHeeCchhcccHHHHhc
Confidence 1000 122455677788899999999999999999999986
No 126
>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa. Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho
Probab=100.00 E-value=3.9e-37 Score=316.85 Aligned_cols=248 Identities=25% Similarity=0.455 Sum_probs=197.7
Q ss_pred ccCCCcceEEEEEEec---CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCC
Q 003855 508 LLGTGSFGSVYKGTIS---DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGS 583 (791)
Q Consensus 508 ~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 583 (791)
.||+|+||.||+|.+. ++..||+|++.... ....+.+.+|+.++++++||||+++++++.. ...++||||+++|+
T Consensus 2 ~ig~G~~g~v~~~~~~~~~~~~~vavk~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~-~~~~lv~e~~~~~~ 80 (257)
T cd05115 2 ELGSGNFGCVKKGVYKMRKKQIDVAIKVLKNENEKSVRDEMMREAEIMHQLDNPYIVRMIGVCEA-EALMLVMEMASGGP 80 (257)
T ss_pred ccCCCCcccEEEEEEecCCCceeEEEEEcccccChHHHHHHHHHHHHHHhcCCCCeEEEEEEEcC-CCeEEEEEeCCCCC
Confidence 4899999999999764 45679999986553 3345678999999999999999999998864 56789999999999
Q ss_pred HHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc-eee
Q 003855 584 LEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV-TQT 662 (791)
Q Consensus 584 L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~-~~~ 662 (791)
|.+++......+++..+.+++.|++.|++||| +.+++||||||+||+++.++.+||+|||+++......... ...
T Consensus 81 L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~ 156 (257)
T cd05115 81 LNKFLSGKKDEITVSNVVELMHQVSMGMKYLE----GKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARS 156 (257)
T ss_pred HHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccC
Confidence 99999876667899999999999999999999 6789999999999999999999999999998654432211 111
Q ss_pred cccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 663 MTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 663 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
...++..|+|||+.....++.++|||||||++||+++ |..||...... .....+....+ .
T Consensus 157 ~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~-----------------~ 217 (257)
T cd05115 157 AGKWPLKWYAPECINFRKFSSRSDVWSYGITMWEAFSYGQKPYKKMKGP--EVMSFIEQGKR-----------------L 217 (257)
T ss_pred CCCCCcccCCHHHHccCCCCchhhHHHHHHHHHHHhcCCCCCcCcCCHH--HHHHHHHCCCC-----------------C
Confidence 1223578999999888889999999999999999996 99998764221 11111111000 0
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+..++.++.+++.+||..+|++||++.+|.+.|+.+
T Consensus 218 ~~~~~~~~~l~~li~~c~~~~~~~Rp~~~~i~~~l~~~ 255 (257)
T cd05115 218 DCPAECPPEMYALMKDCWIYKWEDRPNFAKVEERMRTY 255 (257)
T ss_pred CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHhhh
Confidence 11123567788999999999999999999999998764
No 127
>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica
Probab=100.00 E-value=1.3e-37 Score=337.83 Aligned_cols=252 Identities=23% Similarity=0.347 Sum_probs=200.3
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+|+.. +++.||||++.... ......+.+|+.+++.++||||+++++++.+++..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (364)
T cd05599 1 DDFESIKVIGRGAFGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSFQDENYLYLIM 80 (364)
T ss_pred CCceEEEEEEecCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEEEcCCeEEEEE
Confidence 47889999999999999999975 68999999997543 334566788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.++|+|||+++.+....
T Consensus 81 E~~~~g~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH----~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~ 155 (364)
T cd05599 81 EYLPGGDMMTLLMKKD-TFTEEETRFYIAETILAIDSIH----KLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSH 155 (364)
T ss_pred CCCCCcHHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEeecccceeccccc
Confidence 9999999999998654 4899999999999999999999 6789999999999999999999999999997653221
Q ss_pred Ccc------------------------------------eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhC
Q 003855 657 DSV------------------------------------TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR 700 (791)
Q Consensus 657 ~~~------------------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg 700 (791)
... .....+||+.|+|||++.+..++.++|||||||++|||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG~il~el~~G 235 (364)
T cd05599 156 RTEFYRILSHALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDYIAPEVFLQTGYNKECDWWSLGVIMYEMLVG 235 (364)
T ss_pred cccccccccccccccccccccccccccccccchhhcccccccccccCccccCHHHHcCCCCCCeeeeecchhHHHHhhcC
Confidence 100 01123689999999999988999999999999999999999
Q ss_pred CCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCC---HHHHHH
Q 003855 701 KRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRIN---VTDAAA 774 (791)
Q Consensus 701 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt---~~ev~~ 774 (791)
..||......+ ....+... .... ..+....+++.+.+++.+|+. +|.+|++ +.|+++
T Consensus 236 ~~Pf~~~~~~~--~~~~i~~~-~~~~-------------~~~~~~~~s~~~~~li~~ll~-~p~~R~~~~~~~~ll~ 295 (364)
T cd05599 236 YPPFCSDNPQE--TYRKIINW-KETL-------------QFPDEVPLSPEAKDLIKRLCC-EAERRLGNNGVNEIKS 295 (364)
T ss_pred CCCCCCCCHHH--HHHHHHcC-CCcc-------------CCCCCCCCCHHHHHHHHHHcc-CHhhcCCCCCHHHHhc
Confidence 99997532211 11111100 0000 000111234567789999996 9999998 888876
No 128
>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus
Probab=100.00 E-value=3.6e-37 Score=333.48 Aligned_cols=201 Identities=25% Similarity=0.376 Sum_probs=175.2
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|+..+.||+|+||+||+|+.. +++.||+|++.... ......+..|+.++.+++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~LG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~~~~~~~~lv~ 80 (363)
T cd05628 1 EDFESLKVIGRGAFGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSFQDKLNLYLIM 80 (363)
T ss_pred CCceEeEEEEeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEEecCCeEEEEE
Confidence 47889999999999999999865 68999999997543 234456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++...+ .+++..+..++.|++.||+||| +.+|+||||||+|||++.++.+||+|||+++.+....
T Consensus 81 E~~~gg~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH----~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~ 155 (363)
T cd05628 81 EFLPGGDMMTLLMKKD-TLTEEETQFYIAETVLAIDSIH----QLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAH 155 (363)
T ss_pred cCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEecCCCHHHeEECCCCCEEEeeccCcccccccc
Confidence 9999999999998654 4899999999999999999999 7899999999999999999999999999997653211
Q ss_pred Cc---------------------------------ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCC
Q 003855 657 DS---------------------------------VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 703 (791)
Q Consensus 657 ~~---------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p 703 (791)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y~aPE~~~~~~~~~~~DvwSlGvil~ell~G~~P 235 (363)
T cd05628 156 RTEFYRNLNHSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (363)
T ss_pred cccccccccccccccccccccccccccchhhhccccccccccCCccccCHHHHcCCCCCCchhhhhhHHHHHHHHhCCCC
Confidence 00 001234799999999999988999999999999999999999999
Q ss_pred CCc
Q 003855 704 TDE 706 (791)
Q Consensus 704 ~~~ 706 (791)
|..
T Consensus 236 f~~ 238 (363)
T cd05628 236 FCS 238 (363)
T ss_pred CCC
Confidence 975
No 129
>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase. Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio
Probab=100.00 E-value=5.2e-37 Score=316.23 Aligned_cols=247 Identities=26% Similarity=0.413 Sum_probs=197.2
Q ss_pred ccCCCcceEEEEEEec---CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCC
Q 003855 508 LLGTGSFGSVYKGTIS---DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNG 582 (791)
Q Consensus 508 ~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 582 (791)
.||+|+||.||+|.++ ++..||+|++.... ....+.+..|+.+++.++||||+++++++.. +..++||||+++|
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv~e~~~~~ 80 (257)
T cd05116 2 ELGSGNFGTVKKGMYKMKKSEKTVAVKILKNDNNDPALKDELLREANVMQQLDNPYIVRMIGICEA-ESWMLVMELAELG 80 (257)
T ss_pred cCCCcCCcceEEeEEecCCCceEEEEEEccCCCCcHHHHHHHHHHHHHHHhCCCCCcceEEEEEcC-CCcEEEEecCCCC
Confidence 6899999999999753 67889999986443 3345678899999999999999999999864 5678999999999
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc-ee
Q 003855 583 SLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV-TQ 661 (791)
Q Consensus 583 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~-~~ 661 (791)
+|.+++.... .+++..+..++.|++.|++||| +.+|+||||||+||++++++.+||+|||+++.+....... ..
T Consensus 81 ~L~~~l~~~~-~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~ 155 (257)
T cd05116 81 PLNKFLQKNK-HVTEKNITELVHQVSMGMKYLE----ETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAK 155 (257)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeec
Confidence 9999997654 4889999999999999999999 6789999999999999999999999999998765433221 11
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQA 740 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 740 (791)
....++..|+|||......++.++|||||||++|||++ |+.||..... ......+... . .
T Consensus 156 ~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~--~~~~~~i~~~---~--------------~ 216 (257)
T cd05116 156 THGKWPVKWYAPECMNYYKFSSKSDVWSFGVLMWEAFSYGQKPYKGMKG--NEVTQMIESG---E--------------R 216 (257)
T ss_pred CCCCCCccccCHhHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHHCC---C--------------C
Confidence 22234578999999888889999999999999999998 9999875322 1122221110 0 0
Q ss_pred hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 741 FSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 741 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
.+.+..++.++.+++.+||+.||++||++.+|.+.|++.
T Consensus 217 ~~~~~~~~~~l~~li~~~~~~~p~~Rp~~~~i~~~l~~~ 255 (257)
T cd05116 217 MECPQRCPPEMYDLMKLCWTYGVDERPGFAVVELRLRNY 255 (257)
T ss_pred CCCCCCCCHHHHHHHHHHhccCchhCcCHHHHHHHHhcc
Confidence 011123556788999999999999999999999999764
No 130
>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,
Probab=100.00 E-value=7.6e-37 Score=319.81 Aligned_cols=251 Identities=24% Similarity=0.329 Sum_probs=200.6
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
.|++.+.||+|+||.||++... +++.||||++.... ......+.+|+.++++++||||+++++++.+++..++|||
T Consensus 1 ~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 80 (285)
T cd05605 1 TFRHYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLT 80 (285)
T ss_pred CceEEEEEecCCCeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeeecCCCeEEEEEe
Confidence 3778899999999999999864 78999999986543 2223457789999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 578 FMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 578 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
|+++|+|.+++... ...+++..+..++.|++.|+.||| +.+++||||||+||++++++.++|+|||+++......
T Consensus 81 ~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 156 (285)
T cd05605 81 LMNGGDLKFHIYNMGNPGFDEERAVFYAAEITCGLEDLH----RERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGE 156 (285)
T ss_pred ccCCCcHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH----HCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCC
Confidence 99999999988754 345899999999999999999999 6789999999999999999999999999998764322
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
. .....|+..|+|||++.+..++.++||||+||++|||++|+.||.+.... ..... +........
T Consensus 157 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Diws~G~~l~el~~g~~pf~~~~~~-~~~~~-~~~~~~~~~---------- 221 (285)
T cd05605 157 T---IRGRVGTVGYMAPEVVKNERYTFSPDWWGLGCLIYEMIEGKSPFRQRKEK-VKREE-VERRVKEDQ---------- 221 (285)
T ss_pred c---cccccCCCCccCcHHhcCCCCCccccchhHHHHHHHHHHCCCCCCCCchh-hHHHH-HHHHhhhcc----------
Confidence 2 22346899999999998888999999999999999999999999753211 11111 111000000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRI-----NVTDAAAK 775 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~~ 775 (791)
...+..++..+.+++.+|++.||++|| ++.++++.
T Consensus 222 ----~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~~ 261 (285)
T cd05605 222 ----EEYSEKFSEAARSICRQLLTKDPGFRLGCRGEGAEEVKAH 261 (285)
T ss_pred ----cccCcccCHHHHHHHHHHccCCHHHhcCCCCCCHHHHhcC
Confidence 001123456678999999999999999 78888653
No 131
>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored
Probab=100.00 E-value=5.3e-37 Score=318.39 Aligned_cols=257 Identities=25% Similarity=0.472 Sum_probs=206.7
Q ss_pred hhccccccccCCCcceEEEEEEec-CC---cEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DG---TDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
.++|+..+.||+|+||.||+|+.. ++ ..+|+|.+.... ....+.+..|++++++++||||+++.+++.+.+..++
T Consensus 4 ~~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~l 83 (268)
T cd05063 4 PSHITKQKVIGAGEFGEVFRGILKMPGRKEVAVAIKTLKPGYTEKQRQDFLSEASIMGQFSHHNIIRLEGVVTKFKPAMI 83 (268)
T ss_pred hHHceEeeEecCCCCccEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCCCeeEEEEEEccCCCcEE
Confidence 457888899999999999999875 33 379999886542 3445678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||+++++|.+++......+++.++..++.|++.|++||| +.+++||||||+||++++++.+|++|||++.....
T Consensus 84 v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~ 159 (268)
T cd05063 84 ITEYMENGALDKYLRDHDGEFSSYQLVGMLRGIAAGMKYLS----DMNYVHRDLAARNILVNSNLECKVSDFGLSRVLED 159 (268)
T ss_pred EEEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeccccchhhEEEcCCCcEEECCCccceeccc
Confidence 99999999999999876666899999999999999999999 67899999999999999999999999999987643
Q ss_pred CCCcce-eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcch
Q 003855 655 GEDSVT-QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 655 ~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
...... ......+..|+|||+...+.++.++|||||||++|||++ |+.||..... ......+.. ..
T Consensus 160 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~il~ell~~g~~p~~~~~~--~~~~~~i~~---~~------- 227 (268)
T cd05063 160 DPEGTYTTSGGKIPIRWTAPEAIAYRKFTSASDVWSFGIVMWEVMSFGERPYWDMSN--HEVMKAIND---GF------- 227 (268)
T ss_pred ccccceeccCCCcCceecCHHHhhcCCcChHhHHHHHHHHHHHHHhCCCCCCCcCCH--HHHHHHHhc---CC-------
Confidence 322111 111223457999999988889999999999999999998 9999865321 111111110 00
Q ss_pred hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 733 NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+....++.++.+++.+|++.+|++||++.+|++.|+++
T Consensus 228 -------~~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~i~~~l~~~ 267 (268)
T cd05063 228 -------RLPAPMDCPSAVYQLMLQCWQQDRARRPRFVDIVNLLDKL 267 (268)
T ss_pred -------CCCCCCCCCHHHHHHHHHHcCCCcccCcCHHHHHHHHHhh
Confidence 0111223556788999999999999999999999999875
No 132
>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp
Probab=100.00 E-value=3.3e-37 Score=327.06 Aligned_cols=240 Identities=24% Similarity=0.292 Sum_probs=189.9
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|..++... +||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~~~~~~~~lv~e~~~g 80 (316)
T cd05592 1 KVLGKGSFGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTFQTKEHLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999975 68889999997643 22334455666777654 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~~~~~~-~~~~~~~~~~~~qi~~al~~LH----~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~--~~~ 153 (316)
T cd05592 81 GDLMFHIQSSG-RFDEARARFYAAEIICGLQFLH----KKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGE--GKA 153 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCC--Ccc
Confidence 99999997654 4889999999999999999999 6789999999999999999999999999997643322 122
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....||+.|+|||++.+..++.++|||||||++|||++|+.||.+.... +.+....... +
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~G~~Pf~~~~~~-----~~~~~i~~~~------~--------- 213 (316)
T cd05592 154 STFCGTPDYIAPEILKGQKYNESVDWWSFGVLLYEMLIGQSPFHGEDED-----ELFDSILNDR------P--------- 213 (316)
T ss_pred ccccCCccccCHHHHcCCCCCCcccchhHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHcCC------C---------
Confidence 3356899999999999888999999999999999999999999753211 1111110000 0
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHH-HHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVT-DAA 773 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~-ev~ 773 (791)
..+..++.++.+++.+||+.||++||++. +++
T Consensus 214 ~~~~~~~~~~~~ll~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05592 214 HFPRWISKEAKDCLSKLFERDPTKRLGVDGDIR 246 (316)
T ss_pred CCCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 00112345677999999999999999876 443
No 133
>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu
Probab=100.00 E-value=1.9e-36 Score=315.27 Aligned_cols=254 Identities=27% Similarity=0.466 Sum_probs=201.3
Q ss_pred cccccccCCCcceEEEEEEecC----CcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCe-----
Q 003855 503 FNECNLLGTGSFGSVYKGTISD----GTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDF----- 571 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~----- 571 (791)
|.+.+.||+|+||.||+|.... +..||+|++.... ......+..|+..++.++||||+++++++.....
T Consensus 1 ~~~~~~lg~G~~g~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 80 (273)
T cd05035 1 LKLGKILGEGEFGSVMEGQLSQDDGSQLKVAVKTMKLDIHTYSEIEEFLSEAACMKDFDHPNVMKLIGVCFEASSLQKIP 80 (273)
T ss_pred CccccccCcCCCceEEEEEEecCCCCcceEEEEEeccCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEeeeccCCccccCc
Confidence 5677899999999999998642 3679999987542 3345678999999999999999999998865443
Q ss_pred -eeEEEecCCCCCHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEee
Q 003855 572 -KALVLEFMPNGSLEKWLYSH-----NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSD 645 (791)
Q Consensus 572 -~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~D 645 (791)
.++|+||+++|+|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||++++++.+||+|
T Consensus 81 ~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~aL~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~d 156 (273)
T cd05035 81 KPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFMVDIALGMEYLS----NRNFIHRDLAARNCMLREDMTVCVAD 156 (273)
T ss_pred ccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHHHHHHHHHHHHH----hCCeeccccchheEEECCCCeEEECC
Confidence 78999999999999998632 235889999999999999999999 67899999999999999999999999
Q ss_pred eccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCC
Q 003855 646 FGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPH 724 (791)
Q Consensus 646 fgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 724 (791)
||+++...............++..|+|||++....++.++|||||||++|||++ |..||.+.... ...+++......
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~SlG~il~el~~~g~~p~~~~~~~--~~~~~~~~~~~~ 234 (273)
T cd05035 157 FGLSKKIYSGDYYRQGRIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGQTPYPGVENH--EIYDYLRHGNRL 234 (273)
T ss_pred ccceeeccccccccccccccCCccccCHhhcccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHcCCCC
Confidence 999987654433222222335678999999988899999999999999999999 88888653221 111221110000
Q ss_pred ChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 725 GLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 725 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+..++..+.+++.+||+.||++||++.|+++.|+++
T Consensus 235 -----------------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~e~~~~l~~~ 272 (273)
T cd05035 235 -----------------KQPEDCLDELYDLMYSCWRADPKDRPTFTKLREVLENI 272 (273)
T ss_pred -----------------CCCcCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 01123456788999999999999999999999999875
No 134
>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2. Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp
Probab=100.00 E-value=5.3e-37 Score=329.47 Aligned_cols=260 Identities=27% Similarity=0.429 Sum_probs=202.8
Q ss_pred hhccccccccCCCcceEEEEEEe------cCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccC-C
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTI------SDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNP-D 570 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~------~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-~ 570 (791)
.++|++.+.||+|+||.||+|.. .+++.||||++.... ....+.+.+|+.++.++ +||||+++++++... .
T Consensus 6 ~~~~~~~~~lG~G~fg~V~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~~~~~~~~~~~ 85 (343)
T cd05103 6 RDRLKLGKPLGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGG 85 (343)
T ss_pred hhHhcccccccCCccceEEEEeeccCCccccceeEEEEEeccCCChHHHHHHHHHHHHHHhccCCccHhhhcceeecCCC
Confidence 36799999999999999999973 357889999987543 33456788899999999 689999999988654 4
Q ss_pred eeeEEEecCCCCCHHHHHhhCC----------------------------------------------------------
Q 003855 571 FKALVLEFMPNGSLEKWLYSHN---------------------------------------------------------- 592 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~---------------------------------------------------------- 592 (791)
..++||||+++|+|.++++...
T Consensus 86 ~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (343)
T cd05103 86 PLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGKSGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEE 165 (343)
T ss_pred ceEEEEeccCCCcHHHHHHhcCCccccccccccccccccccccchhhhhhhhccccccccccccccccCCCccccchhhh
Confidence 5789999999999999987421
Q ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecc
Q 003855 593 --------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMT 664 (791)
Q Consensus 593 --------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 664 (791)
..+++..+.+++.|+++||+||| +.+|+||||||+||++++++.+||+|||+++..............
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~ 241 (343)
T cd05103 166 AEQEDLYKKVLTLEDLICYSFQVAKGMEFLA----SRKCIHRDLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDA 241 (343)
T ss_pred hhhhhhhhccCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCccCeEEEcCCCcEEEEecccccccccCcchhhcCCC
Confidence 13677888999999999999999 779999999999999999999999999999875433322222223
Q ss_pred cccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHH
Q 003855 665 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSA 743 (791)
Q Consensus 665 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 743 (791)
.++..|+|||...+..++.++||||||+++|||++ |..||......+. ....+..... ...
T Consensus 242 ~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~-~~~~~~~~~~-----------------~~~ 303 (343)
T cd05103 242 RLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-FCRRLKEGTR-----------------MRA 303 (343)
T ss_pred CCCcceECcHHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCccccHH-HHHHHhccCC-----------------CCC
Confidence 45678999999888889999999999999999997 8899865322111 1111100000 000
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 744 KMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 744 ~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
+..++.++.+++.+||+.+|++||++.|+++.|+.+.+
T Consensus 304 ~~~~~~~~~~~~~~cl~~~p~~Rps~~eil~~l~~~~~ 341 (343)
T cd05103 304 PDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQ 341 (343)
T ss_pred CCCCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHh
Confidence 11133567899999999999999999999999998854
No 135
>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors. Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul
Probab=100.00 E-value=6e-37 Score=317.69 Aligned_cols=256 Identities=27% Similarity=0.473 Sum_probs=206.7
Q ss_pred hccccccccCCCcceEEEEEEec----CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS----DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
.+|++.+.||+|+||.||+|... .+..||+|.+.... ....+.+..|+.++++++||||+++++++...+..++|
T Consensus 4 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 83 (267)
T cd05066 4 SCIKIEKVIGAGEFGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVVTKSKPVMIV 83 (267)
T ss_pred HHeEeeeeecccCCCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEecCCccEEE
Confidence 57888999999999999999863 23479999886543 34456789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
|||+++|+|.+++......+++.++..++.|++.|++||| +.+++||||||+||+++.++.++++|||++..+...
T Consensus 84 ~e~~~~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lH----~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~ 159 (267)
T cd05066 84 TEYMENGSLDAFLRKHDGQFTVIQLVGMLRGIASGMKYLS----DMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDD 159 (267)
T ss_pred EEcCCCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCEeehhhchhcEEECCCCeEEeCCCCcccccccc
Confidence 9999999999999877666899999999999999999999 678999999999999999999999999999876543
Q ss_pred CCcce-eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 656 EDSVT-QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 656 ~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
..... .....++..|+|||+..+..++.++||||||+++||+++ |..||...... .....+....
T Consensus 160 ~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~--~~~~~~~~~~----------- 226 (267)
T cd05066 160 PEAAYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWEMSNQ--DVIKAIEEGY----------- 226 (267)
T ss_pred cceeeecCCCccceeecCHhHhccCccCchhhhHHHHHHHHHHhcCCCCCcccCCHH--HHHHHHhCCC-----------
Confidence 32111 111223568999999988889999999999999999887 99998653221 1111111100
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+....++..+.+++.+|++.+|++||++.++++.|.++
T Consensus 227 ------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~ 266 (267)
T cd05066 227 ------RLPAPMDCPAALHQLMLDCWQKDRNERPKFEQIVSILDKL 266 (267)
T ss_pred ------cCCCCCCCCHHHHHHHHHHcccCchhCCCHHHHHHHHHhh
Confidence 0011123456788999999999999999999999999875
No 136
>PRK13184 pknD serine/threonine-protein kinase; Reviewed
Probab=100.00 E-value=6.3e-37 Score=349.29 Aligned_cols=261 Identities=23% Similarity=0.300 Sum_probs=205.4
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+|+.. +|+.||+|++.... ....+.+.+|++++++++||||+++++++.+.+..++||
T Consensus 2 grYeIi~~LGkGgfG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~~d~~~lyLVM 81 (932)
T PRK13184 2 QRYDIIRLIGKGGMGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSICSDGDPVYYTM 81 (932)
T ss_pred CCeEEEEEEecCCCEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEEeeCCEEEEEE
Confidence 57899999999999999999865 68999999986532 234567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhC----------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeee
Q 003855 577 EFMPNGSLEKWLYSH----------NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDF 646 (791)
Q Consensus 577 e~~~~g~L~~~l~~~----------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 646 (791)
||++||+|.+++... ....++..+.+++.||++||+||| +.+|+||||||+||+++.++.++|+||
T Consensus 82 EY~eGGSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~~QIa~AL~yLH----s~GIIHRDLKPeNILLd~dg~vKLiDF 157 (932)
T PRK13184 82 PYIEGYTLKSLLKSVWQKESLSKELAEKTSVGAFLSIFHKICATIEYVH----SKGVLHRDLKPDNILLGLFGEVVILDW 157 (932)
T ss_pred EcCCCCCHHHHHHHhhhccccchhhhcccCHHHHHHHHHHHHHHHHHHH----HCCccccCCchheEEEcCCCCEEEEec
Confidence 999999999998631 123567788899999999999999 678999999999999999999999999
Q ss_pred ccccccCCCCCc----------------ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccC
Q 003855 647 GISKLLGEGEDS----------------VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG 710 (791)
Q Consensus 647 gla~~~~~~~~~----------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~ 710 (791)
|+|+........ ......+||+.|+|||++.+..++.++|||||||++|||+||+.||......
T Consensus 158 GLAk~i~~~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~YmAPE~l~g~~~S~kSDIWSLGVILyELLTG~~PF~~~~~~ 237 (932)
T PRK13184 158 GAAIFKKLEEEDLLDIDVDERNICYSSMTIPGKIVGTPDYMAPERLLGVPASESTDIYALGVILYQMLTLSFPYRRKKGR 237 (932)
T ss_pred CcceecccccccccccccccccccccccccCCCCCCCCCCCCHHHhcCCCCCcHhHHHHHHHHHHHHHHCCCCCCCcchh
Confidence 999876211100 0111246899999999999999999999999999999999999999752211
Q ss_pred cchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCC-CHHHHHHHHHHHHHH
Q 003855 711 EMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRI-NVTDAAAKLKKIKVK 782 (791)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-t~~ev~~~L~~~~~~ 782 (791)
...... .. .+ ........+++..+.+++.+|++.||++|| ++.++.+.|+.....
T Consensus 238 ki~~~~----~i-------~~------P~~~~p~~~iP~~L~~LI~rcL~~DP~kR~ss~eeLl~~Le~~lq~ 293 (932)
T PRK13184 238 KISYRD----VI-------LS------PIEVAPYREIPPFLSQIAMKALAVDPAERYSSVQELKQDLEPHLQG 293 (932)
T ss_pred hhhhhh----hc-------cC------hhhccccccCCHHHHHHHHHHccCChhhCcCHHHHHHHHHHHHHhc
Confidence 111000 00 00 000011124566788999999999999996 667777888777554
No 137
>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including
Probab=100.00 E-value=7.3e-37 Score=321.86 Aligned_cols=261 Identities=24% Similarity=0.364 Sum_probs=201.1
Q ss_pred hccccccccCCCcceEEEEEEecC---------------CcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISD---------------GTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILS 564 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~---------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~ 564 (791)
++|++.+.||+|+||.||++.... ...||+|.+.... ......+.+|++++++++|||++++++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~ 84 (295)
T cd05097 5 QQLRLKEKLGEGQFGEVHLCEAEGLAEFLGEGAPEFDGQPVLVAVKMLRADVTKTARNDFLKEIKIMSRLKNPNIIRLLG 84 (295)
T ss_pred HhCeehhccCCCCCceEEecccccchhhccccCcccCCCceEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCcCeEEE
Confidence 578999999999999999987532 2358999987543 334567899999999999999999999
Q ss_pred eeccCCeeeEEEecCCCCCHHHHHhhCC-----------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCe
Q 003855 565 SCSNPDFKALVLEFMPNGSLEKWLYSHN-----------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNI 633 (791)
Q Consensus 565 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~-----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Ni 633 (791)
++......++||||+++++|.+++.... ..+++..+..++.|++.|++||| +.+++||||||+||
T Consensus 85 ~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~al~~lH----~~~i~H~dlkp~Ni 160 (295)
T cd05097 85 VCVSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIANLLYMAVQIASGMKYLA----SLNFVHRDLATRNC 160 (295)
T ss_pred EEcCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHHHHHHHHHHHHHHHHHH----hcCeeccccChhhE
Confidence 9999999999999999999999996432 23688899999999999999999 67899999999999
Q ss_pred EeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh--CCCCCCccccCc
Q 003855 634 LLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT--RKRPTDEMFTGE 711 (791)
Q Consensus 634 ll~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt--g~~p~~~~~~~~ 711 (791)
++++++.+||+|||+++...............++..|+|||+...+.++.++|||||||++|||++ |..||......
T Consensus 161 ll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~- 239 (295)
T cd05097 161 LVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMAWESILLGKFTTASDVWAFGVTLWEMFTLCKEQPYSLLSDE- 239 (295)
T ss_pred EEcCCCcEEecccccccccccCcceeccCcCcCceeecChhhhccCCcCchhhHHHHHHHHHHHHHcCCCCCCcccChH-
Confidence 999999999999999986544332222233345778999999888889999999999999999998 55677642211
Q ss_pred chHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 712 MSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 712 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
.................. ......++..+.+++.+|++.+|++||++.+|++.|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~l~~li~~~l~~~p~~RPs~~~i~~~l~ 294 (295)
T cd05097 240 QVIENTGEFFRNQGRQIY-----------LSQTPLCPSPVFKLMMRCWSRDIKDRPTFNKIHHFLR 294 (295)
T ss_pred HHHHHHHHhhhhcccccc-----------CCCCCCCCHHHHHHHHHHcCCCchhCcCHHHHHHHHh
Confidence 111111000000000000 0001124567889999999999999999999999886
No 138
>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta
Probab=100.00 E-value=3.7e-37 Score=322.90 Aligned_cols=259 Identities=24% Similarity=0.404 Sum_probs=204.2
Q ss_pred HhhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCe
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDF 571 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 571 (791)
..++|++.+.||+|+||.||+|..+ .+..||+|.+.... ......+.+|+.+++.++||||+++++++.+...
T Consensus 4 ~~~~~~i~~~lg~G~~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~ 83 (288)
T cd05061 4 SREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQP 83 (288)
T ss_pred cHHHceeeeeecCCCCcEEEEEEEeccCCCCcceEEEEEECCCcCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEcCCCC
Confidence 4678999999999999999999753 24579999876443 2234467889999999999999999999999999
Q ss_pred eeEEEecCCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEE
Q 003855 572 KALVLEFMPNGSLEKWLYSHN---------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAH 642 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~k 642 (791)
.++||||+++|+|.+++.... ...++..+..++.|++.||.||| +++|+||||||+||++++++.++
T Consensus 84 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dikp~nili~~~~~~~ 159 (288)
T cd05061 84 TLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMAYLN----AKKFVHRDLAARNCMVAHDFTVK 159 (288)
T ss_pred cEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCCcCCCCChheEEEcCCCcEE
Confidence 999999999999999997421 23466788899999999999999 67899999999999999999999
Q ss_pred EeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHh
Q 003855 643 VSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKES 721 (791)
Q Consensus 643 l~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~ 721 (791)
++|||+++...............++..|+|||.+.++.++.++|||||||++|||++ |..||...... ...+++.
T Consensus 160 L~Dfg~~~~~~~~~~~~~~~~~~~~~~y~~pE~~~~~~~~~~~DvwslG~~l~el~~~~~~p~~~~~~~--~~~~~~~-- 235 (288)
T cd05061 160 IGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE--QVLKFVM-- 235 (288)
T ss_pred ECcCCccccccccccccccCCCcccccccCHHHhccCCCChHhHHHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHH--
Confidence 999999986544332222222345678999999988899999999999999999999 78888653211 1111111
Q ss_pred cCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 722 LPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 722 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
..... ..+..++..+.+++.+|++.+|++||++.|+++.++...
T Consensus 236 -~~~~~--------------~~~~~~~~~~~~li~~~l~~~p~~Rps~~~ll~~l~~~~ 279 (288)
T cd05061 236 -DGGYL--------------DQPDNCPERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDL 279 (288)
T ss_pred -cCCCC--------------CCCCCCCHHHHHHHHHHcCCChhHCcCHHHHHHHHHhhc
Confidence 00000 001133467889999999999999999999999988764
No 139
>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src. Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo
Probab=100.00 E-value=6.4e-37 Score=316.38 Aligned_cols=253 Identities=28% Similarity=0.454 Sum_probs=203.1
Q ss_pred hccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
++|++.++||+|+||.||+|+..++..||+|++..... ..+.+..|+.++++++||||+++++++.+ ...++||||++
T Consensus 6 ~~~~~~~~lg~g~~~~v~~~~~~~~~~valK~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~~ 83 (262)
T cd05071 6 ESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTM-SPEAFLQEAQVMKKLRHEKLVQLYAVVSE-EPIYIVTEYMS 83 (262)
T ss_pred HHeeEeeecCCCCCCcEEEEEecCCceEEEEecccCcc-CHHHHHHHHHHHHhCCCCCcceEEEEECC-CCcEEEEEcCC
Confidence 56899999999999999999987777899999875332 23568889999999999999999998754 55789999999
Q ss_pred CCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 581 NGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 581 ~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
+|+|.+++... ...+++..+..++.|+++||+|+| +.+++||||||+||++++++.++|+|||.++.+......
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~- 158 (262)
T cd05071 84 KGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVE----RMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT- 158 (262)
T ss_pred CCcHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHH----HCCccccccCcccEEEcCCCcEEeccCCceeeccccccc-
Confidence 99999999864 345789999999999999999999 678999999999999999999999999999876443221
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
......++..|+|||+..++.++.++||||||+++|||+| |..||......+. ........
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~DvwslG~~l~ellt~g~~p~~~~~~~~~-----~~~~~~~~------------- 220 (262)
T cd05071 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPYPGMVNREV-----LDQVERGY------------- 220 (262)
T ss_pred cccCCcccceecCHhHhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCChHHH-----HHHHhcCC-------------
Confidence 1122346678999999988889999999999999999999 7888865322110 11000000
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+....++..+.+++.+|++.+|++||++.++.+.|+..
T Consensus 221 -~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~~~~~l~~~ 260 (262)
T cd05071 221 -RMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAFLEDY 260 (262)
T ss_pred -CCCCccccCHHHHHHHHHHccCCcccCCCHHHHHHHHHHh
Confidence 0011124567788999999999999999999999998864
No 140
>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors. Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke
Probab=100.00 E-value=9.9e-37 Score=321.30 Aligned_cols=262 Identities=24% Similarity=0.375 Sum_probs=205.5
Q ss_pred hhccccccccCCCcceEEEEEEecC-----------------CcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccce
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISD-----------------GTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIK 561 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~-----------------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~ 561 (791)
.++|++.+.||+|+||.||+|...+ +..||+|.+.... ....+.+.+|++++++++||||++
T Consensus 4 ~~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~ 83 (296)
T cd05051 4 RQPLNFVEKLGEGQFGEVHLCEADGLQDFSEKAFAENDNADAPVLVAVKVLRPDASDNAREDFLKEVKILSRLSDPNIAR 83 (296)
T ss_pred hhhCcccccccCCCCccEEEEEeccCCcccccccccccccCCceeEEEEEecCccCHHHHHHHHHHHHHHHhcCCCCEeE
Confidence 3578999999999999999997542 2458999987553 345667889999999999999999
Q ss_pred eeeeeccCCeeeEEEecCCCCCHHHHHhhCC----------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCC
Q 003855 562 ILSSCSNPDFKALVLEFMPNGSLEKWLYSHN----------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPT 631 (791)
Q Consensus 562 l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~ 631 (791)
+++++...+..++||||+++++|.+++.... ..+++..+..++.|++.||+||| +.+++||||||+
T Consensus 84 ~~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~LH----~~~i~H~dlkp~ 159 (296)
T cd05051 84 LLGVCTVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTLLYMATQIASGMRYLE----SLNFVHRDLATR 159 (296)
T ss_pred EEEEEecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHHHHHHHHHHHHHHHHH----HcCccccccchh
Confidence 9999999899999999999999999997543 25899999999999999999999 678999999999
Q ss_pred CeEeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh--CCCCCCcccc
Q 003855 632 NILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT--RKRPTDEMFT 709 (791)
Q Consensus 632 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt--g~~p~~~~~~ 709 (791)
||+++.++.++|+|||+++...............++..|+|||+...+.++.++|||||||++|||++ |..||.....
T Consensus 160 Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~ 239 (296)
T cd05051 160 NCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRWMAWESVLLGKFTTKSDVWAFGVTLWEILTLCREQPYEHLTD 239 (296)
T ss_pred ceeecCCCceEEccccceeecccCcceeecCcCCCCceecCHHHhhcCCCCccchhhhhHHHHHHHHhcCCCCCCCCcCh
Confidence 99999999999999999987644433233334456788999999888889999999999999999998 6677754321
Q ss_pred CcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 710 GEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 710 ~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
....+............. ..+.+..++.++.+++.+|++.||++|||+.|+++.|+
T Consensus 240 --~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~l~~li~~cl~~~p~~Rpt~~el~~~L~ 295 (296)
T cd05051 240 --QQVIENAGHFFRDDGRQI----------YLPRPPNCPKDIYELMLECWRRDEEDRPTFREIHLFLQ 295 (296)
T ss_pred --HHHHHHHHhccccccccc----------cCCCccCCCHHHHHHHHHHhccChhcCCCHHHHHHHhc
Confidence 111111111100000000 00011234567899999999999999999999999885
No 141
>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha. Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien
Probab=100.00 E-value=2e-37 Score=330.45 Aligned_cols=242 Identities=23% Similarity=0.266 Sum_probs=194.5
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNG 582 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 582 (791)
+.||+|+||.||+++.. +++.||+|++.... ......+..|+++++.++||||+++.+++...+..++||||+++|
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~~ 80 (325)
T cd05594 1 KLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGG 80 (325)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEEEcCCEEEEEEeCCCCC
Confidence 36999999999999864 78999999997643 234456778999999999999999999999999999999999999
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceee
Q 003855 583 SLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQT 662 (791)
Q Consensus 583 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~ 662 (791)
+|.+++.... .+++..+..++.||+.||+|||+ ..+|+||||||+||++++++.+||+|||+++....... ...
T Consensus 81 ~L~~~l~~~~-~l~~~~~~~~~~qi~~aL~~lH~---~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~--~~~ 154 (325)
T cd05594 81 ELFFHLSRER-VFSEDRARFYGAEIVSALDYLHS---EKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGA--TMK 154 (325)
T ss_pred cHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---cCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCc--ccc
Confidence 9999887654 48999999999999999999993 26899999999999999999999999999875432211 122
Q ss_pred cccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhH
Q 003855 663 MTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFS 742 (791)
Q Consensus 663 ~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 742 (791)
...||+.|+|||++.+..++.++|||||||++|||+||+.||..... ......+. .... .
T Consensus 155 ~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~tG~~Pf~~~~~--~~~~~~i~---~~~~---------------~ 214 (325)
T cd05594 155 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFYNQDH--EKLFELIL---MEEI---------------R 214 (325)
T ss_pred cccCCcccCCHHHHccCCCCCccccccccceeeeeccCCCCCCCCCH--HHHHHHHh---cCCC---------------C
Confidence 34689999999999888999999999999999999999999965221 11111110 0000 0
Q ss_pred HHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003855 743 AKMDCILSIMDLALDCCIESPDMRI-----NVTDAAA 774 (791)
Q Consensus 743 ~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~ 774 (791)
.+..++.++.+++.+|++.||++|+ ++.++++
T Consensus 215 ~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~il~ 251 (325)
T cd05594 215 FPRTLSPEAKSLLSGLLKKDPKQRLGGGPDDAKEIMQ 251 (325)
T ss_pred CCCCCCHHHHHHHHHHhhcCHHHhCCCCCCCHHHHhc
Confidence 0112345678999999999999997 8998875
No 142
>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal
Probab=100.00 E-value=3.6e-37 Score=327.39 Aligned_cols=236 Identities=25% Similarity=0.322 Sum_probs=190.6
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.+ +++.||||++.... ....+.+..|..++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~~~~~~~iv~Ey~~~ 80 (320)
T cd05590 1 RVLGKGSFGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCFQTPDRLFFVMEFVNG 80 (320)
T ss_pred CeeeeCCCeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999975 68899999987543 23455677888888876 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++....... ..
T Consensus 81 g~L~~~i~~~~-~l~~~~~~~~~~ql~~~L~~lH----~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~--~~ 153 (320)
T cd05590 81 GDLMFHIQKSR-RFDEARARFYAAEITSALMFLH----DKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGK--TT 153 (320)
T ss_pred chHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCC--cc
Confidence 99999998654 3889999999999999999999 67899999999999999999999999999875432211 22
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ..+........
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~-----~~~~~i~~~~~--------------- 213 (320)
T cd05590 154 STFCGTPDYIAPEILQEMLYGPSVDWWAMGVLLYEMLCGHAPFEAENED-----DLFEAILNDEV--------------- 213 (320)
T ss_pred cccccCccccCHHHHcCCCCCCccchhhhHHHHHHHhhCCCCCCCCCHH-----HHHHHHhcCCC---------------
Confidence 3346899999999999889999999999999999999999999753211 11111111000
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINV 769 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~ 769 (791)
..+..++.++.+++.+|++.||++||++
T Consensus 214 ~~~~~~~~~~~~li~~~L~~dP~~R~~~ 241 (320)
T cd05590 214 VYPTWLSQDAVDILKAFMTKNPTMRLGS 241 (320)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCC
Confidence 0011234567899999999999999998
No 143
>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl
Probab=100.00 E-value=6.6e-37 Score=326.71 Aligned_cols=247 Identities=21% Similarity=0.265 Sum_probs=195.0
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. +++.||+|+++... ....+.+..|..++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (329)
T cd05588 1 RVIGRGSYAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCFQTESRLFFVIEFVSG 80 (329)
T ss_pred CeEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEEEcCCEEEEEEeCCCC
Confidence 36999999999999865 78899999997643 23345678899999988 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++...+ .+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++....... ..
T Consensus 81 g~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~--~~ 153 (329)
T cd05588 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNFLH----ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGD--TT 153 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEECcCccccccccCCC--cc
Confidence 99999987654 4899999999999999999999 77999999999999999999999999999875322111 22
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccC---cchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG---EMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
....||..|+|||++.+..++.++|||||||++|||++|+.||+..... .....++........ .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~~~~~------------~ 221 (329)
T cd05588 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGMSDNPDQNTEDYLFQVILEK------------Q 221 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceechHHHHHHHHHCCCCcccccccccccccchHHHHHHHHcC------------C
Confidence 2346899999999999999999999999999999999999999742211 111112211111110 0
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCC------HHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRIN------VTDAAA 774 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt------~~ev~~ 774 (791)
.. .+..++.++.+++.+|++.||++||+ +.|+++
T Consensus 222 ~~--~p~~~~~~~~~li~~~L~~dP~~R~~~~~~~~~~~i~~ 261 (329)
T cd05588 222 IR--IPRSLSVKASSVLKGFLNKDPKERLGCHPQTGFRDIKS 261 (329)
T ss_pred CC--CCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCHHHHhc
Confidence 00 11124456789999999999999997 566653
No 144
>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o
Probab=100.00 E-value=6.7e-37 Score=326.46 Aligned_cols=242 Identities=21% Similarity=0.268 Sum_probs=191.0
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~E~~~~ 80 (329)
T cd05618 1 RVIGRGSYAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIEYVNG 80 (329)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEEEeCCEEEEEEeCCCC
Confidence 46999999999999965 68899999997643 23445677888888877 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~i~~qi~~~l~~lH----~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~--~~ 153 (329)
T cd05618 81 GDLMFHMQRQR-KLPEEHARFYSAEISLALNYLH----ERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGD--TT 153 (329)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCC--cc
Confidence 99999887654 4899999999999999999999 67899999999999999999999999999975422211 22
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccC---cchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG---EMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~---~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
....||..|+|||++.+..++.++|||||||++|||++|+.||...... ......++....... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~~~~~~~~~~i~~~------------~ 221 (329)
T cd05618 154 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEK------------Q 221 (329)
T ss_pred ccccCCccccCHHHHcCCCCCCccceecccHHHHHHhhCCCCCccCCCcCCcccccHHHHHHHHhcC------------C
Confidence 2346899999999999999999999999999999999999999642211 111112211111000 0
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINV 769 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~ 769 (791)
. ..+..++.++.+++.+||+.||++||++
T Consensus 222 ~--~~p~~~~~~~~~ll~~~L~~dP~~R~~~ 250 (329)
T cd05618 222 I--RIPRSLSVKAASVLKSFLNKDPKERLGC 250 (329)
T ss_pred C--CCCCCCCHHHHHHHHHHhcCCHHHcCCC
Confidence 0 0111344567899999999999999984
No 145
>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g
Probab=100.00 E-value=1.4e-36 Score=316.87 Aligned_cols=244 Identities=23% Similarity=0.292 Sum_probs=194.1
Q ss_pred cCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCH
Q 003855 509 LGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSL 584 (791)
Q Consensus 509 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 584 (791)
||+|+||+||++... +++.||+|.+.... ....+.+..|+++++.++||||+++.+++......++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~g~L 80 (280)
T cd05608 1 LGKGGFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAFQTKTDLCLVMTIMNGGDL 80 (280)
T ss_pred CCCCCceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEEcCCCeEEEEEeCCCCCCH
Confidence 799999999999865 78899999987543 22345677899999999999999999999999999999999999999
Q ss_pred HHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 585 EKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 585 ~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
.+++.. ....+++..+..++.||+.||.||| +.+|+||||||+||++++++.++|+|||++..+...... .
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~--~ 154 (280)
T cd05608 81 RYHIYNVDEENPGFPEPRACFYTAQIISGLEHLH----QRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSK--T 154 (280)
T ss_pred HHHHHhccccCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcc--c
Confidence 988853 2345899999999999999999999 678999999999999999999999999999876443221 2
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....|++.|+|||++.+..++.++|||||||++|||++|+.||....... ............. .
T Consensus 155 ~~~~g~~~y~aPE~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~---------------~ 218 (280)
T cd05608 155 KGYAGTPGFMAPELLQGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKV-ENKELKQRILNDS---------------V 218 (280)
T ss_pred cccCCCcCccCHHHhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCcch-hHHHHHHhhcccC---------------C
Confidence 23468999999999999999999999999999999999999997532211 1111111100000 0
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRI-----NVTDAAA 774 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~ 774 (791)
..+..++..+.+++.+|++.||++|| ++.++++
T Consensus 219 ~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~~l~ 256 (280)
T cd05608 219 TYPDKFSPASKSFCEALLAKDPEKRLGFRDGNCDGLRT 256 (280)
T ss_pred CCcccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHhc
Confidence 01123456788999999999999999 6667665
No 146
>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=5.7e-37 Score=328.30 Aligned_cols=251 Identities=24% Similarity=0.274 Sum_probs=197.6
Q ss_pred ccccccccCCCcceEEEEEEe----cCCcEEEEEEeehhh----hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCee
Q 003855 502 EFNECNLLGTGSFGSVYKGTI----SDGTDVAIKIFNLQL----ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFK 572 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 572 (791)
+|++.+.||+|+||.||+++. .+++.||+|++.... ....+.+..|+.+++.+ +||+|+++++++...+..
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (332)
T cd05614 1 NFELLKVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAFQTEAKL 80 (332)
T ss_pred CceEEEEEeecCCEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEEecCCEE
Confidence 478899999999999999875 368899999987542 23345678899999999 599999999999999999
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++||||+++|+|.+++..... +++..+..++.||+.||.||| +.+|+||||||+|||++.++.+||+|||+++.+
T Consensus 81 ~lv~e~~~~g~L~~~l~~~~~-~~~~~~~~~~~qi~~~l~~lH----~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~ 155 (332)
T cd05614 81 HLILDYVSGGEMFTHLYQRDN-FSEDEVRFYSGEIILALEHLH----KLGIVYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (332)
T ss_pred EEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----HCCcEecCCCHHHeEECCCCCEEEeeCcCCccc
Confidence 999999999999999986543 889999999999999999999 678999999999999999999999999999865
Q ss_pred CCCCCcceeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 653 GEGEDSVTQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 653 ~~~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
...... ......||..|+|||++.+. .++.++|||||||++|||+||+.||........ ........... +
T Consensus 156 ~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~~~~~~-~~~~~~~~~~~------~ 227 (332)
T cd05614 156 LSEEKE-RTYSFCGTIEYMAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLEGERNT-QSEVSRRILKC------D 227 (332)
T ss_pred cccCCC-ccccccCCccccCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCCCCCCC-HHHHHHHHhcC------C
Confidence 433222 12234689999999988764 478899999999999999999999965322111 11111110000 0
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRI-----NVTDAAA 774 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~ 774 (791)
+ ..+..++..+.+++.+|++.||++|| ++.++++
T Consensus 228 ~---------~~~~~~~~~~~~li~~~l~~dp~~R~~~~~~~~~~~l~ 266 (332)
T cd05614 228 P---------PFPSFIGPEAQDLLHKLLRKDPKKRLGAGPQGASEIKE 266 (332)
T ss_pred C---------CCCCCCCHHHHHHHHHHcCCCHHHcCCCCCCCHHHHHc
Confidence 0 00112345678999999999999999 6777764
No 147
>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase. Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in
Probab=100.00 E-value=6.1e-37 Score=331.73 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=201.1
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~~~~~~~~l 120 (370)
T cd05596 41 KAEDFDVIKVIGRGAFGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAFQDDKYLYM 120 (370)
T ss_pred CHHHcEEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEEecCCEEEE
Confidence 3578999999999999999999875 68899999987542 2334557789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||+++|+|.+++.... ++...+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++....
T Consensus 121 v~Ey~~gg~L~~~l~~~~--l~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~ 194 (370)
T cd05596 121 VMEYMPGGDLVNLMSNYD--IPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDA 194 (370)
T ss_pred EEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEcCCCCEEEEeccceeeccC
Confidence 999999999999987643 788888899999999999999 67899999999999999999999999999987643
Q ss_pred CCCcceeecccccccccCCCccCCC----CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEG----IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
... .......||+.|+|||++.+. .++.++|||||||++|||++|+.||...... ..+........ .
T Consensus 195 ~~~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~-~~~~~i~~~~~--~----- 265 (370)
T cd05596 195 NGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLV-GTYSKIMDHKN--S----- 265 (370)
T ss_pred CCc-ccCCCCCCCcCeECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHH-HHHHHHHcCCC--c-----
Confidence 221 122335689999999987543 4889999999999999999999999752211 11111100000 0
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDM--RINVTDAAAK 775 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPt~~ev~~~ 775 (791)
...+....++.++.+++.+|++.+|++ ||++.|+++.
T Consensus 266 --------~~~~~~~~~s~~~~~li~~~L~~~p~r~~R~s~~ell~h 304 (370)
T cd05596 266 --------LTFPDDIEISKQAKDLICAFLTDREVRLGRNGVDEIKSH 304 (370)
T ss_pred --------CCCCCcCCCCHHHHHHHHHHccChhhccCCCCHHHHhcC
Confidence 001111134567789999999999988 9999999753
No 148
>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a
Probab=100.00 E-value=1.6e-36 Score=317.54 Aligned_cols=269 Identities=23% Similarity=0.393 Sum_probs=204.6
Q ss_pred ccccccccCCCcceEEEEEEe-----cCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccC--Ceee
Q 003855 502 EFNECNLLGTGSFGSVYKGTI-----SDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP--DFKA 573 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~-----~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 573 (791)
-|++.+.||+|+||.||.+++ .++..||+|.+.... ....+.+.+|+.++++++||||+++.+++.+. ...+
T Consensus 5 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 84 (284)
T cd05079 5 FLKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIK 84 (284)
T ss_pred hhhhceecCCCCceeEEEEEEccCCCCccceEEEEEcCccccHHHHHHHHHHHHHHHhCCCCCeeeeeeEEecCCCCceE
Confidence 467889999999999999974 357889999986543 34456789999999999999999999998764 5688
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
+||||+++++|.+++.+....+++.++..++.|++.||+||| +.+++||||||+||+++.++.++|+|||+++.+.
T Consensus 85 lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~~~i~~aL~~lH----~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~ 160 (284)
T cd05079 85 LIMEFLPSGSLKEYLPRNKNKINLKQQLKYAVQICKGMDYLG----SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIE 160 (284)
T ss_pred EEEEccCCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecccchheEEEcCCCCEEECCCccccccc
Confidence 999999999999999876556899999999999999999999 6789999999999999999999999999998765
Q ss_pred CCCCcc-eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC-Chhhhcc
Q 003855 654 EGEDSV-TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH-GLTEVVD 731 (791)
Q Consensus 654 ~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~d 731 (791)
...... ......++..|+|||+..+..++.++|||||||++|||+|++.|....... ..........+ .....+.
T Consensus 161 ~~~~~~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~ellt~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 237 (284)
T cd05079 161 TDKEYYTVKDDLDSPVFWYAPECLIQSKFYIASDVWSFGVTLYELLTYCDSESSPMTL---FLKMIGPTHGQMTVTRLVR 237 (284)
T ss_pred cCccceeecCCCCCCccccCHHHhccCCCCccccchhhhhhhhhhhcCCCCCccccch---hhhhcccccccccHHHHHH
Confidence 433221 112234667899999988888999999999999999999987764321110 00000000000 0000000
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
.+ ......+....++..+.+++.+|++.+|++||++.|+++.++.+
T Consensus 238 -~~-~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~~~ 283 (284)
T cd05079 238 -VL-EEGKRLPRPPNCPEEVYQLMRKCWEFQPSKRTTFQNLIEGFEAI 283 (284)
T ss_pred -HH-HcCccCCCCCCCCHHHHHHHHHHccCCcccCcCHHHHHHHHHhh
Confidence 00 00001111224567889999999999999999999999999875
No 149
>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C. Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory
Probab=100.00 E-value=5.1e-37 Score=327.20 Aligned_cols=241 Identities=25% Similarity=0.281 Sum_probs=193.4
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccC-CccceeeeeeccCCeeeEEE
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRH-RNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~ 576 (791)
+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+..|.+++..+.| ++|+++++++.+.+..++||
T Consensus 1 ~y~~~~~lg~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (324)
T cd05587 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVM 80 (324)
T ss_pred CceEEEEEeeccCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEEEcCCEEEEEE
Confidence 4788899999999999999865 67899999987543 2345667889999999976 46888999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++..... +++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~~-~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~ 155 (324)
T cd05587 81 EYVNGGDLMYHIQQVGK-FKEPHAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGG 155 (324)
T ss_pred cCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCC
Confidence 99999999999976543 789999999999999999999 6789999999999999999999999999987532211
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
. ......||+.|+|||++.+..++.++||||+||++|||+||+.||...... .....+.. ..
T Consensus 156 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~~--~~~~~i~~---~~----------- 217 (324)
T cd05587 156 K--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDED--ELFQSIME---HN----------- 217 (324)
T ss_pred C--ceeeecCCccccChhhhcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCHH--HHHHHHHc---CC-----------
Confidence 1 223346899999999999999999999999999999999999999753211 11111111 00
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINV 769 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~ 769 (791)
...+..++.++.+++.+|++.||++||+.
T Consensus 218 ----~~~~~~~~~~~~~li~~~l~~~P~~R~~~ 246 (324)
T cd05587 218 ----VSYPKSLSKEAVSICKGLLTKHPAKRLGC 246 (324)
T ss_pred ----CCCCCCCCHHHHHHHHHHhhcCHHHcCCC
Confidence 00011234567899999999999999976
No 150
>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1. Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.
Probab=100.00 E-value=7.4e-37 Score=322.04 Aligned_cols=257 Identities=28% Similarity=0.461 Sum_probs=202.9
Q ss_pred hccccccccCCCcceEEEEEEec-CCc--EEEEEEeehh-hhHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGT--DVAIKIFNLQ-LERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~--~vavK~~~~~-~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv 575 (791)
++|++.+.||+|+||.||+|..+ ++. .+++|.++.. .....+.+..|+.+++++ +||||+++++++...+..++|
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~~~~~~~lv 81 (297)
T cd05089 2 EDIKFEDVIGEGNFGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGACENRGYLYIA 81 (297)
T ss_pred ccceeeeeecCCCcceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEEccCCcceEE
Confidence 57889999999999999999875 333 4788887643 234456788999999999 799999999999998999999
Q ss_pred EecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCc
Q 003855 576 LEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMA 640 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~ 640 (791)
+||+++|+|.+++.... ..+++..+..++.|++.|++||| +.+|+||||||+||++++++.
T Consensus 82 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~lH----~~~ivH~dlkp~Nill~~~~~ 157 (297)
T cd05089 82 IEYAPYGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFASDVATGMQYLS----EKQFIHRDLAARNVLVGENLA 157 (297)
T ss_pred EEecCCCcHHHHHHhccccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCcCCcceEEECCCCe
Confidence 99999999999997532 24788999999999999999999 678999999999999999999
Q ss_pred EEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHH
Q 003855 641 AHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVK 719 (791)
Q Consensus 641 ~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~ 719 (791)
+||+|||++...... ........+..|+|||+.....++.++|||||||++|||++ |..||...... .+..
T Consensus 158 ~kl~dfg~~~~~~~~---~~~~~~~~~~~y~aPE~~~~~~~~~~~DvwSlG~il~el~t~g~~pf~~~~~~-----~~~~ 229 (297)
T cd05089 158 SKIADFGLSRGEEVY---VKKTMGRLPVRWMAIESLNYSVYTTKSDVWSFGVLLWEIVSLGGTPYCGMTCA-----ELYE 229 (297)
T ss_pred EEECCcCCCccccce---eccCCCCcCccccCchhhccCCCCchhhHHHHHHHHHHHHcCCCCCCCCCCHH-----HHHH
Confidence 999999998643211 11111223567999999988889999999999999999998 99998653221 1111
Q ss_pred HhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 720 ESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 720 ~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
.... .. ....+..++..+.+++.+||+.+|.+||++.++++.|+.+....
T Consensus 230 ~~~~-~~-------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~~~~~~ 279 (297)
T cd05089 230 KLPQ-GY-------------RMEKPRNCDDEVYELMRQCWRDRPYERPPFAQISVQLSRMLEAR 279 (297)
T ss_pred HHhc-CC-------------CCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHhh
Confidence 1100 00 00011234567889999999999999999999999999887644
No 151
>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr
Probab=100.00 E-value=1.3e-36 Score=316.66 Aligned_cols=246 Identities=22% Similarity=0.305 Sum_probs=194.4
Q ss_pred cCCCcceEEEEEEec-CCcEEEEEEeehhhh---HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCH
Q 003855 509 LGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSL 584 (791)
Q Consensus 509 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 584 (791)
||+|+||.||+++.+ +|+.||+|.+..... ...+.+..|++++++++||||+++++++.++...++||||+++|+|
T Consensus 1 lg~G~~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~~~~~~~~lv~e~~~g~~L 80 (277)
T cd05607 1 LGKGGFGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAFESKTHLCLVMSLMNGGDL 80 (277)
T ss_pred CCCCCceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEEecCCeEEEEEecCCCCCH
Confidence 799999999999865 689999999865321 2234456799999999999999999999999999999999999999
Q ss_pred HHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeec
Q 003855 585 EKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTM 663 (791)
Q Consensus 585 ~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 663 (791)
.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||++....... ....
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~---~~~~ 153 (277)
T cd05607 81 KYHIYNVGERGLEMERVIHYSAQITCGILHLH----SMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGK---TITQ 153 (277)
T ss_pred HHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----HCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCc---eeec
Confidence 9988643 335889999999999999999999 6789999999999999999999999999998764322 2233
Q ss_pred ccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHH
Q 003855 664 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSA 743 (791)
Q Consensus 664 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 743 (791)
..|+..|+|||++.+..++.++||||+||++|||++|+.||....... ............... ..
T Consensus 154 ~~~~~~y~aPE~~~~~~~~~~~DvwslGv~l~el~~g~~p~~~~~~~~-~~~~~~~~~~~~~~~--------------~~ 218 (277)
T cd05607 154 RAGTNGYMAPEILKEEPYSYPVDWFAMGCSIYEMVAGRTPFKDHKEKV-AKEELKRRTLEDEVK--------------FE 218 (277)
T ss_pred cCCCCCccCHHHHccCCCCCchhHHHHHHHHHHHHhCCCCCCCCcchh-hHHHHHHHhhccccc--------------cc
Confidence 468899999999988889999999999999999999999987532211 111111111110000 00
Q ss_pred HHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 744 KMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 744 ~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
...++.++.+++.+||+.||++||+++|+++..
T Consensus 219 ~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~~ 251 (277)
T cd05607 219 HQNFTEESKDICRLFLAKKPEDRLGSREKNDDP 251 (277)
T ss_pred cccCCHHHHHHHHHHhccCHhhCCCCccchhhh
Confidence 012456678999999999999999997766443
No 152
>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1. Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom
Probab=100.00 E-value=9.6e-37 Score=314.85 Aligned_cols=239 Identities=21% Similarity=0.320 Sum_probs=190.9
Q ss_pred cccCCCcceEEEEEEecC-------------CcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeee
Q 003855 507 NLLGTGSFGSVYKGTISD-------------GTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~-------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 573 (791)
+.||+|+||.||+|+..+ ...||+|.+..........+.+|+.+++.++||||+++++++......+
T Consensus 1 ~~lg~G~~~~vy~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~l~~l~hp~iv~~~~~~~~~~~~~ 80 (262)
T cd05077 1 EHLGRGTRTQIYAGILNYKDDDEDDGYSYEKEIKVILKVLDPSHRDISLAFFETASMMRQVSHKHIVLLYGVCVRDVENI 80 (262)
T ss_pred CccccCCcceEeeeecccCCCccccccchhhceeEEEeecChhhhhHHHHHHHHHHHHHhCCCCCEeeEEEEEecCCCCE
Confidence 368999999999998532 2358999887665556667888999999999999999999999888999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCc-------EEEeee
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMA-------AHVSDF 646 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~-------~kl~Df 646 (791)
+||||+++|+|..++......+++..+.+++.||++|++||| +.+|+||||||+||+++.++. ++++||
T Consensus 81 lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~ 156 (262)
T cd05077 81 MVEEFVEFGPLDLFMHRKSDVLTTPWKFKVAKQLASALSYLE----DKDLVHGNVCTKNILLAREGIDGECGPFIKLSDP 156 (262)
T ss_pred EEEecccCCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHhh----hCCeECCCCCcccEEEecCCccCCCCceeEeCCC
Confidence 999999999999998876666899999999999999999999 778999999999999987664 899999
Q ss_pred ccccccCCCCCcceeecccccccccCCCccC-CCCCCccccHHhHHHHHHHHH-hCCCCCCccccCcchHHHHHHHhcCC
Q 003855 647 GISKLLGEGEDSVTQTMTMATIGYMAPEYGS-EGIVSAKCDVYSYGVLLMETF-TRKRPTDEMFTGEMSLRRWVKESLPH 724 (791)
Q Consensus 647 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~ell-tg~~p~~~~~~~~~~~~~~~~~~~~~ 724 (791)
|++...... ....++..|+|||++. +..++.++|||||||++|||+ +|..|+......+ .......
T Consensus 157 g~~~~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~--~~~~~~~---- 224 (262)
T cd05077 157 GIPITVLSR------QECVERIPWIAPECVEDSKNLSIAADKWSFGTTLWEICYNGEIPLKDKTLAE--KERFYEG---- 224 (262)
T ss_pred CCCccccCc------ccccccccccChhhhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCcchhH--HHHHHhc----
Confidence 998754321 2235788899999876 467899999999999999998 5888876422111 1111000
Q ss_pred ChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 725 GLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 725 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
.. .. ....+.++.+++.+||+.||++||++.++++.+
T Consensus 225 ~~-~~--------------~~~~~~~~~~li~~cl~~dp~~Rp~~~~il~~~ 261 (262)
T cd05077 225 QC-ML--------------VTPSCKELADLMTHCMNYDPNQRPFFRAIMRDI 261 (262)
T ss_pred Cc-cC--------------CCCChHHHHHHHHHHcCCChhhCcCHHHHHHhc
Confidence 00 00 001235678999999999999999999999876
No 153
>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of
Probab=100.00 E-value=3.1e-37 Score=336.02 Aligned_cols=253 Identities=23% Similarity=0.325 Sum_probs=197.7
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+..|++++++++||||+++++++.+....++||
T Consensus 1 ~~y~~~~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~~~~~~~~lv~ 80 (377)
T cd05629 1 EDFHTVKVIGKGAFGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSFQDAQYLYLIM 80 (377)
T ss_pred CCceEeEEEeecCCEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEEEcCCeeEEEE
Confidence 46889999999999999999864 78999999986542 334567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+|+.+....
T Consensus 81 E~~~gg~L~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH----~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~ 155 (377)
T cd05629 81 EFLPGGDLMTMLIKYD-TFSEDVTRFYMAECVLAIEAVH----KLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQH 155 (377)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEECCCCCEEEeeccccccccccc
Confidence 9999999999998654 4788899999999999999999 7899999999999999999999999999996432210
Q ss_pred Cc---------------------------------------------ceeecccccccccCCCccCCCCCCccccHHhHH
Q 003855 657 DS---------------------------------------------VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYG 691 (791)
Q Consensus 657 ~~---------------------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G 691 (791)
.. ......+||+.|+|||++.+..++.++||||||
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlG 235 (377)
T cd05629 156 DSAYYQKLLQGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDYIAPEIFLQQGYGQECDWWSLG 235 (377)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccccCHHHHccCCCCCceeeEecc
Confidence 00 000124689999999999888999999999999
Q ss_pred HHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCC---CC
Q 003855 692 VLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMR---IN 768 (791)
Q Consensus 692 ~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R---Pt 768 (791)
|++|||++|+.||...... ..+..... . .... ..+....++.++.+++.+|+. +|.+| ++
T Consensus 236 vil~elltG~~Pf~~~~~~-~~~~~i~~-~-~~~~-------------~~p~~~~~s~~~~dli~~lL~-~~~~r~~r~~ 298 (377)
T cd05629 236 AIMFECLIGWPPFCSENSH-ETYRKIIN-W-RETL-------------YFPDDIHLSVEAEDLIRRLIT-NAENRLGRGG 298 (377)
T ss_pred hhhhhhhcCCCCCCCCCHH-HHHHHHHc-c-CCcc-------------CCCCCCCCCHHHHHHHHHHhc-CHhhcCCCCC
Confidence 9999999999999653211 11111100 0 0000 001111234567799999997 77765 59
Q ss_pred HHHHHHH
Q 003855 769 VTDAAAK 775 (791)
Q Consensus 769 ~~ev~~~ 775 (791)
+.|+++.
T Consensus 299 ~~~~l~h 305 (377)
T cd05629 299 AHEIKSH 305 (377)
T ss_pred HHHHhcC
Confidence 9988764
No 154
>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer. Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c
Probab=100.00 E-value=1e-36 Score=312.80 Aligned_cols=247 Identities=30% Similarity=0.487 Sum_probs=199.6
Q ss_pred cccCCCcceEEEEEEecCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCHH
Q 003855 507 NLLGTGSFGSVYKGTISDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSLE 585 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 585 (791)
+.||+|+||.||+|...+++.||+|.+.... ......+.+|++++++++||||+++++++...+..++||||+++|+|.
T Consensus 1 ~~ig~g~~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L~ 80 (250)
T cd05085 1 ELLGKGNFGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVCTQRQPIYIVMELVPGGDFL 80 (250)
T ss_pred CccCCCCCceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEEecCCccEEEEECCCCCcHH
Confidence 3699999999999998888999999886543 333456889999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeeccc
Q 003855 586 KWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTM 665 (791)
Q Consensus 586 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~ 665 (791)
+++......+++..+..++.|++.||.|+| ..+++||||||+||++++++.+|++|||++......... ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~-~~~~~~ 155 (250)
T cd05085 81 SFLRKKKDELKTKQLVKFALDAAAGMAYLE----SKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYS-SSGLKQ 155 (250)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecccChheEEEcCCCeEEECCCccceeccccccc-cCCCCC
Confidence 999876666899999999999999999999 678999999999999999999999999999754332211 111223
Q ss_pred ccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHH
Q 003855 666 ATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAK 744 (791)
Q Consensus 666 g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 744 (791)
++..|+|||+..++.++.++||||||+++||+++ |..||...... .....+..... ...+
T Consensus 156 ~~~~y~aPE~~~~~~~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~--~~~~~~~~~~~-----------------~~~~ 216 (250)
T cd05085 156 IPIKWTAPEALNYGRYSSESDVWSYGILLWETFSLGVCPYPGMTNQ--QAREQVEKGYR-----------------MSCP 216 (250)
T ss_pred CcccccCHHHhccCCCCchhHHHHHHHHHHHHhcCCCCCCCCCCHH--HHHHHHHcCCC-----------------CCCC
Confidence 4678999999988899999999999999999998 99998653221 11111111000 0001
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 745 MDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 745 ~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
..++..+.+++.+|++.+|++||++.|++++|.
T Consensus 217 ~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~ 249 (250)
T cd05085 217 QKCPDDVYKVMQRCWDYKPENRPKFSELQKELA 249 (250)
T ss_pred CCCCHHHHHHHHHHcccCcccCCCHHHHHHHhc
Confidence 134567889999999999999999999999875
No 155
>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to
Probab=100.00 E-value=4.4e-37 Score=327.17 Aligned_cols=241 Identities=23% Similarity=0.252 Sum_probs=193.1
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|.+++..+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~~~~~~~~lv~E~~~~ 80 (321)
T cd05591 1 KVLGKGSFGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCFQTKDRLFFVMEYVNG 80 (321)
T ss_pred CccccCCCeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCeEEEEEeCCCC
Confidence 36999999999999875 67899999987643 23345677788888876 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++....... ..
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~--~~ 153 (321)
T cd05591 81 GDLMFQIQRSR-KFDEPRSRFYAAEVTLALMFLH----RHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGV--TT 153 (321)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEeecccceecccCCc--cc
Confidence 99999987654 3889999999999999999999 67899999999999999999999999999976432221 22
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+.+. ....
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~tg~~Pf~~~~~~--~~~~~i~---~~~~--------------- 213 (321)
T cd05591 154 TTFCGTPDYIAPEILQELEYGPSVDWWALGVLMYEMMAGQPPFEADNED--DLFESIL---HDDV--------------- 213 (321)
T ss_pred cccccCccccCHHHHcCCCCCCccceechhHHHHHHhcCCCCCCCCCHH--HHHHHHH---cCCC---------------
Confidence 3346899999999999889999999999999999999999999753211 1111111 0000
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCC-------CHHHHHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRI-------NVTDAAA 774 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RP-------t~~ev~~ 774 (791)
..+..++.++.+++.+|++.||++|| ++.++++
T Consensus 214 ~~p~~~~~~~~~ll~~~L~~dp~~R~~~~~~~~~~~~~~~ 253 (321)
T cd05591 214 LYPVWLSKEAVSILKAFMTKNPNKRLGCVASQGGEDAIKQ 253 (321)
T ss_pred CCCCCCCHHHHHHHHHHhccCHHHcCCCCCCCCCHHHHhc
Confidence 00112345678999999999999999 7777764
No 156
>KOG0577 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.5e-38 Score=325.01 Aligned_cols=245 Identities=27% Similarity=0.324 Sum_probs=203.1
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehh---hhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ---LERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
-|...+.||.|+||.||-|+.. +.+.||||.+... ..+.+.++.+|+.++++++|||++.+-|||......|+|||
T Consensus 27 lf~dLrEIGHGSFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCyLre~TaWLVME 106 (948)
T KOG0577|consen 27 LFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCYLREHTAWLVME 106 (948)
T ss_pred HHHHHHHhcCCccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCcccccceeeccchHHHHHH
Confidence 3555678999999999999864 7889999988644 34557889999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|| -|+-.|.+.-++.++.+.++..|+.+.++||+||| +.+.||||||+.|||+++.|.||++|||.|....+.
T Consensus 107 YC-lGSAsDlleVhkKplqEvEIAAi~~gaL~gLaYLH----S~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PA-- 179 (948)
T KOG0577|consen 107 YC-LGSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH----SHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPA-- 179 (948)
T ss_pred HH-hccHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH----HhhHHhhhccccceEecCCCeeeeccccchhhcCch--
Confidence 99 56999999887778999999999999999999999 788999999999999999999999999999876543
Q ss_pred cceeecccccccccCCCcc---CCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 658 SVTQTMTMATIGYMAPEYG---SEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
...+||+.|||||++ ..+.|+-|+||||+||+..|+..+++|+-.+... +...-+....+.
T Consensus 180 ----nsFvGTPywMAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAM--SALYHIAQNesP---------- 243 (948)
T KOG0577|consen 180 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM--SALYHIAQNESP---------- 243 (948)
T ss_pred ----hcccCCccccchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHH--HHHHHHHhcCCC----------
Confidence 336799999999974 4688999999999999999999999997553211 111111111110
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.....+++..+..++..|++.-|++|||..++++.
T Consensus 244 ------tLqs~eWS~~F~~Fvd~CLqKipqeRptse~ll~H 278 (948)
T KOG0577|consen 244 ------TLQSNEWSDYFRNFVDSCLQKIPQERPTSEELLKH 278 (948)
T ss_pred ------CCCCchhHHHHHHHHHHHHhhCcccCCcHHHHhhc
Confidence 01123567788899999999999999999988764
No 157
>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc
Probab=100.00 E-value=3.1e-36 Score=310.40 Aligned_cols=249 Identities=25% Similarity=0.321 Sum_probs=203.7
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehh--hhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|...+.||+|+||.||+|..+ +++.|++|.+... .....+.+..|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08529 1 DFEILNKIGKGSFGVVFKVVRKADKRVYAMKQIDLSKMNRREREEAIDEARVLAKLDSSYIIRYYESFLDKGKLNIVMEY 80 (256)
T ss_pred CceEeEEecCCCCeEEEEEEEcCCCcEEEEEEeehhhCCHHHHHHHHHHHHHHHhcCCCCeehheeeeccCCEEEEEEEe
Confidence 4777889999999999999875 7899999988643 234456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+++++|.+++... ...+++..+..++.|++.|+.||| ..+++||||+|+||++++++.++|+|||+++.+.....
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~i~~~l~~al~~lH----~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~ 156 (256)
T cd08529 81 AENGDLHKLLKMQRGRPLPEDQVWRFFIQILLGLAHLH----SKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTN 156 (256)
T ss_pred CCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEEeCCCCEEEcccccceeccCccc
Confidence 9999999999864 456899999999999999999999 67899999999999999999999999999987654322
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
. .....|+..|+|||+..+..++.++||||||+++|||++|+.||..... ....+.+.. ....
T Consensus 157 ~--~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~--~~~~~~~~~---~~~~---------- 219 (256)
T cd08529 157 F--ANTIVGTPYYLSPELCEDKPYNEKSDVWALGVVLYECCTGKHPFDANNQ--GALILKIIR---GVFP---------- 219 (256)
T ss_pred h--hhccccCccccCHHHhcCCCCCCccchHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHc---CCCC----------
Confidence 1 2234578899999999988999999999999999999999999975321 111111110 0000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.....++..+.+++.+||+.+|++||++.++++.
T Consensus 220 ----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~~ 253 (256)
T cd08529 220 ----PVSQMYSQQLAQLIDQCLTKDYRQRPDTFQLLRN 253 (256)
T ss_pred ----CCccccCHHHHHHHHHHccCCcccCcCHHHHhhC
Confidence 0011345668899999999999999999999863
No 158
>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk. Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r
Probab=100.00 E-value=6.7e-37 Score=316.05 Aligned_cols=253 Identities=26% Similarity=0.467 Sum_probs=203.2
Q ss_pred hhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.++|++.+.||+|+||.||+|..+++..||+|.+..... ..+.+.+|+.++++++|||++++++++.. ...++||||+
T Consensus 5 ~~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~E~~~l~~l~~~~i~~~~~~~~~-~~~~lv~e~~ 82 (260)
T cd05070 5 RESLQLIKKLGNGQFGEVWMGTWNGNTKVAVKTLKPGTM-SPESFLEEAQIMKKLRHDKLVQLYAVVSE-EPIYIVTEYM 82 (260)
T ss_pred hHHhhhhheeccccCceEEEEEecCCceeEEEEecCCCC-CHHHHHHHHHHHHhcCCCceEEEEeEECC-CCcEEEEEec
Confidence 467889999999999999999988888999999875432 23568899999999999999999998854 5678999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++++|.+++... ...+++.++..++.+++.|++||| +.+++||||||+||++++++.++|+|||++..+......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~ 158 (260)
T cd05070 83 SKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIE----RMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYT 158 (260)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccc
Confidence 999999999864 345899999999999999999999 678999999999999999999999999999876443221
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
......++..|+|||+..+..++.++||||||+++|||++ |..||...... ...+.+....+
T Consensus 159 -~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~--~~~~~~~~~~~-------------- 221 (260)
T cd05070 159 -ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR--EVLEQVERGYR-------------- 221 (260)
T ss_pred -cccCCCCCccccChHHHhcCCCcchhhhHHHHHHHHHHHhcCCCCCCCCCHH--HHHHHHHcCCC--------------
Confidence 1122235678999999888889999999999999999999 88898653211 11111111000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
.+.+..++..+.+++.+|++.+|++|||+.++.+.|++
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~ 259 (260)
T cd05070 222 ---MPCPQDCPISLHELMLQCWKKDPEERPTFEYLQSFLED 259 (260)
T ss_pred ---CCCCCcCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 01112345678899999999999999999999998875
No 159
>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in
Probab=100.00 E-value=7.5e-37 Score=324.11 Aligned_cols=240 Identities=25% Similarity=0.328 Sum_probs=191.2
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. +++.||||++.... ....+.+..|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~~~~~~~~lv~ey~~~ 80 (316)
T cd05619 1 KMLGKGSFGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTFQTKENLFFVMEYLNG 80 (316)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999975 67899999997653 23345566777888764 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++.... .+++.++..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++....... ..
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~LH----~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~--~~ 153 (316)
T cd05619 81 GDLMFHIQSCH-KFDLPRATFYAAEIICGLQFLH----SKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDA--KT 153 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCC--ce
Confidence 99999998653 3789999999999999999999 67899999999999999999999999999975322211 12
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....||+.|+|||++.+..++.++|||||||++|||++|+.||...... ...+.+....+ .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~--~~~~~i~~~~~----------------~- 214 (316)
T cd05619 154 CTFCGTPDYIAPEILLGQKYNTSVDWWSFGVLLYEMLIGQSPFHGHDEE--ELFQSIRMDNP----------------C- 214 (316)
T ss_pred eeecCCccccCHHHHcCCCCCchhhhhhHHHHHHHHHhCCCCCCCCCHH--HHHHHHHhCCC----------------C-
Confidence 2346899999999999889999999999999999999999999753211 11111110000 0
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHH-HHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVT-DAA 773 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~-ev~ 773 (791)
.+..++.++.+++.+|++.||++||++. ++.
T Consensus 215 -~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 246 (316)
T cd05619 215 -YPRWLTREAKDILVKLFVREPERRLGVKGDIR 246 (316)
T ss_pred -CCccCCHHHHHHHHHHhccCHhhcCCChHHHH
Confidence 0012345677999999999999999997 554
No 160
>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological
Probab=100.00 E-value=5.4e-37 Score=320.00 Aligned_cols=255 Identities=25% Similarity=0.436 Sum_probs=205.1
Q ss_pred hhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCee
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFK 572 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 572 (791)
.++|++.+.||+|+||.||+|... ++..||+|.+.... ......+.+|+.+++.++||||+++++++......
T Consensus 5 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~ 84 (277)
T cd05032 5 REKITLIRELGQGSFGMVYEGLAKGVVKGEPETRVAIKTVNENASMRERIEFLNEASVMKEFNCHHVVRLLGVVSTGQPT 84 (277)
T ss_pred hHHeeEEeEecCCCCceEEEEEEeccCCCCcceeEEEEecCCccCHHHHHHHHHHHHHHHhCCCCceeEEEEEEcCCCCc
Confidence 468899999999999999999864 24689999986443 33456788899999999999999999999999999
Q ss_pred eEEEecCCCCCHHHHHhhCC---------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEE
Q 003855 573 ALVLEFMPNGSLEKWLYSHN---------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHV 643 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~---------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl 643 (791)
++||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+++||||||+||++++++.+||
T Consensus 85 ~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~di~p~nill~~~~~~kl 160 (277)
T cd05032 85 LVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFIQMAAEIADGMAYLA----AKKFVHRDLAARNCMVAEDLTVKI 160 (277)
T ss_pred EEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccChheEEEcCCCCEEE
Confidence 99999999999999997432 23678899999999999999999 678999999999999999999999
Q ss_pred eeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhc
Q 003855 644 SDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESL 722 (791)
Q Consensus 644 ~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~ 722 (791)
+|||+++...............++..|+|||...++.++.++|||||||++||++| |..||..... ....+++..
T Consensus 161 ~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~t~g~~p~~~~~~--~~~~~~~~~-- 236 (277)
T cd05032 161 GDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTKSDVWSFGVVLWEMATLAEQPYQGLSN--EEVLKFVID-- 236 (277)
T ss_pred CCcccchhhccCcccccCCCCCccccccCHHHHhcCCCCcccchHHHHHHHHHhhccCCCCCccCCH--HHHHHHHhc--
Confidence 99999987654432222233456789999999988889999999999999999998 8999865321 112222110
Q ss_pred CCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 723 PHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 723 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
... ...+..++..+.+++.+||+.+|++|||+.++++.|+
T Consensus 237 -~~~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~ 276 (277)
T cd05032 237 -GGH--------------LDLPENCPDKLLELMRMCWQYNPKMRPTFLEIVSSLK 276 (277)
T ss_pred -CCC--------------CCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHhc
Confidence 000 0011123567889999999999999999999999875
No 161
>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a
Probab=100.00 E-value=3e-36 Score=312.60 Aligned_cols=258 Identities=25% Similarity=0.349 Sum_probs=208.8
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|+..+.||+|+||.||+|... +|+.||+|.++... ....+.+.+|++++++++|+|++++++++.+.+..++||
T Consensus 2 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 81 (267)
T cd08224 2 GNFKIEKKIGKGQFSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASFIENNELNIVL 81 (267)
T ss_pred CceeeeeeeccCCceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeeeecCCeEEEEE
Confidence 57889999999999999999976 89999999886422 334567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 577 EFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 577 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
||+++|+|.+++.. ....+++.++..++.++++|+.||| +.+++||||+|+||++++++.++++|||+++...
T Consensus 82 e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~ 157 (267)
T cd08224 82 ELADAGDLSRMIKHFKKQKRLIPERTIWKYFVQLCSALEHMH----SKRIMHRDIKPANVFITATGVVKLGDLGLGRFFS 157 (267)
T ss_pred ecCCCCCHHHHHHHhcccCCCcCHHHHHHHHHHHHHHHHHHH----hCCEecCCcChhhEEECCCCcEEEeccceeeecc
Confidence 99999999999864 2345889999999999999999999 6799999999999999999999999999987654
Q ss_pred CCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
.... ......++..|+|||...+..++.++|||||||++|||++|+.||.... ....++...........
T Consensus 158 ~~~~--~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~---~~~~~~~~~~~~~~~~~----- 227 (267)
T cd08224 158 SKTT--AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGDK---MNLYSLCKKIEKCDYPP----- 227 (267)
T ss_pred CCCc--ccceecCCccccCHHHhccCCCCchhcHHHHHHHHHHHHHCCCCcccCC---ccHHHHHhhhhcCCCCC-----
Confidence 3221 1222457889999999988889999999999999999999999985422 22222211111000000
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
. ....++..+.+++.+||+.+|++||++.++++++++++
T Consensus 228 ~--------~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~il~~~~~~~ 266 (267)
T cd08224 228 L--------PADHYSEELRDLVSRCINPDPEKRPDISYVLQVAKEMH 266 (267)
T ss_pred C--------ChhhcCHHHHHHHHHHcCCCcccCCCHHHHHHHHHHhc
Confidence 0 01134566889999999999999999999999999875
No 162
>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea
Probab=100.00 E-value=9.5e-37 Score=318.39 Aligned_cols=258 Identities=24% Similarity=0.440 Sum_probs=208.0
Q ss_pred hccccccccCCCcceEEEEEEec-CCc----EEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGT----DVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
.+|++.+.||+|+||.||+|..+ +|+ .||+|...... ......+.+|+.++++++||||+++++++.. ...++
T Consensus 7 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~~ 85 (279)
T cd05057 7 TELEKIKVLGSGAFGTVYKGVWIPEGEKVKIPVAIKVLREETSPKANKEILDEAYVMASVDHPHVVRLLGICLS-SQVQL 85 (279)
T ss_pred HHcEEcceecCCCCccEEEEEEecCCCCcceEEEEEeccCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEec-CceEE
Confidence 57888999999999999999864 333 58999876553 3445678899999999999999999999987 77899
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||+++|+|.+++......+++..+..++.|++.|++||| +.+++||||||+||++++++.+||+|||+++....
T Consensus 86 v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~LH----~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~ 161 (279)
T cd05057 86 ITQLMPLGCLLDYVRNHKDNIGSQYLLNWCVQIAKGMSYLE----EKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDV 161 (279)
T ss_pred EEecCCCCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCEEecccCcceEEEcCCCeEEECCCcccccccC
Confidence 99999999999999877666899999999999999999999 67899999999999999999999999999987654
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
...........++..|+|||......++.++||||||+++||+++ |+.||+.... ....+.+....
T Consensus 162 ~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~--~~~~~~~~~~~----------- 228 (279)
T cd05057 162 DEKEYHAEGGKVPIKWMALESILHRIYTHKSDVWSYGVTVWELMTFGAKPYEGIPA--VEIPDLLEKGE----------- 228 (279)
T ss_pred cccceecCCCcccccccCHHHhhcCCcCchhhHHHHHHHHHHHhcCCCCCCCCCCH--HHHHHHHhCCC-----------
Confidence 333222222234568999999888889999999999999999998 9999875321 11222221100
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
..+.+..++..+.+++.+||..+|.+||++.+++++|+++.+.
T Consensus 229 ------~~~~~~~~~~~~~~~~~~~l~~~p~~Rp~~~~l~~~l~~~~~~ 271 (279)
T cd05057 229 ------RLPQPPICTIDVYMVLVKCWMIDAESRPTFKELINEFSKMARD 271 (279)
T ss_pred ------CCCCCCCCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHHhC
Confidence 0011112345677999999999999999999999999998553
No 163
>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase. Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M
Probab=100.00 E-value=6.3e-37 Score=321.30 Aligned_cols=256 Identities=25% Similarity=0.400 Sum_probs=203.9
Q ss_pred hhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCee
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFK 572 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 572 (791)
.++|+..+.||+|+||.||+|... ++..||+|++.... ....+.+.+|+.++++++||||+++++++.+++..
T Consensus 4 ~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~ei~~l~~l~h~~iv~~~~~~~~~~~~ 83 (288)
T cd05050 4 RNNIEYVRDIGQGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDHPNIVKLLGVCAVGKPM 83 (288)
T ss_pred hHhceecccccccccccEEEEEEcccCCCCcceeEEEEecCCCcCHHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCcc
Confidence 467899999999999999999863 46789999986543 33456788999999999999999999999999999
Q ss_pred eEEEecCCCCCHHHHHhhCC---------------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCC
Q 003855 573 ALVLEFMPNGSLEKWLYSHN---------------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPT 631 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~---------------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~ 631 (791)
++||||+++|+|.+++.... ..+++..++.++.|++.||+||| ..+++||||||+
T Consensus 84 ~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~aL~~lH----~~~i~H~dl~p~ 159 (288)
T cd05050 84 CLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCGLNPLPLSCTEQLCIAKQVAAGMAYLS----ERKFVHRDLATR 159 (288)
T ss_pred EEEEecCCCCCHHHHHHHcCccccccccccccccccccccccccCHHHHHHHHHHHHHHHHHHH----hCCeecccccHh
Confidence 99999999999999997431 23678889999999999999999 678999999999
Q ss_pred CeEeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccC
Q 003855 632 NILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTG 710 (791)
Q Consensus 632 Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~ 710 (791)
||++++++.++|+|||+++.+..............+..|+|||...+..++.++|||||||++|||++ |..||.+....
T Consensus 160 nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~~~~~p~~~~~~~ 239 (288)
T cd05050 160 NCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGMQPYYGMAHE 239 (288)
T ss_pred heEecCCCceEECccccceecccCccccccCCCccChhhcCHHHHhcCCCCchhHHHHHHHHHHHHHhCCCCCCCCCCHH
Confidence 99999999999999999976543322222222345678999999888899999999999999999998 88888543211
Q ss_pred cchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 711 EMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
++......... .+.+..++.++.+++.+|++.+|++||++.|+++.|++
T Consensus 240 -----~~~~~~~~~~~--------------~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~el~~~l~~ 288 (288)
T cd05050 240 -----EVIYYVRDGNV--------------LSCPDNCPLELYNLMRLCWSKLPSDRPSFASINRILQR 288 (288)
T ss_pred -----HHHHHHhcCCC--------------CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHhhC
Confidence 11111110000 00111345678899999999999999999999999863
No 164
>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an
Probab=100.00 E-value=4.7e-37 Score=335.21 Aligned_cols=251 Identities=22% Similarity=0.318 Sum_probs=195.6
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
.|+.++.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.+.+..++|||
T Consensus 2 ~f~~~~~LG~G~~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~~~~~~~~lv~E 81 (382)
T cd05625 2 MFVKIKTLGIGAFGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVMD 81 (382)
T ss_pred CcEEEEEEEeCCCEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEEEeCCEEEEEEe
Confidence 5888999999999999999864 78899999987543 3445678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+|||++.++.+||+|||+|+.+.....
T Consensus 82 ~~~gg~L~~~l~~~~-~~~e~~~~~~~~qi~~al~~lH----~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~ 156 (382)
T cd05625 82 YIPGGDMMSLLIRMG-IFPEDLARFYIAELTCAVESVH----KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHD 156 (382)
T ss_pred CCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccc
Confidence 999999999997654 4788889999999999999999 67899999999999999999999999999864321000
Q ss_pred ---------------------------------------------cceeecccccccccCCCccCCCCCCccccHHhHHH
Q 003855 658 ---------------------------------------------SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGV 692 (791)
Q Consensus 658 ---------------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~ 692 (791)
.......+||+.|+|||++.+..++.++||||+||
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~aPE~~~~~~~~~~~DiwSlGv 236 (382)
T cd05625 157 SKYYQSGDHVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 236 (382)
T ss_pred ccccccccccccccccccccccccccccccccccchhhhhccccccccccccccCcccCCHHHhcCCCCCCeeeEEechH
Confidence 00011236899999999999889999999999999
Q ss_pred HHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCC---H
Q 003855 693 LLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRIN---V 769 (791)
Q Consensus 693 vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt---~ 769 (791)
++|||++|+.||....+.+ ....... . .... ..+.....++++.+++.+++ .+|++|++ +
T Consensus 237 il~elltG~~Pf~~~~~~~-~~~~i~~-~-~~~~-------------~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~ 299 (382)
T cd05625 237 ILYEMLVGQPPFLAQTPLE-TQMKVIN-W-QTSL-------------HIPPQAKLSPEASDLIIKLC-RGPEDRLGKNGA 299 (382)
T ss_pred HHHHHHhCCCCCCCCCHHH-HHHHHHc-c-CCCc-------------CCCCcccCCHHHHHHHHHHc-cCHhHcCCCCCH
Confidence 9999999999997532211 1111100 0 0000 00111123455677887776 49999997 7
Q ss_pred HHHHH
Q 003855 770 TDAAA 774 (791)
Q Consensus 770 ~ev~~ 774 (791)
.|+++
T Consensus 300 ~ei~~ 304 (382)
T cd05625 300 DEIKA 304 (382)
T ss_pred HHHhc
Confidence 77764
No 165
>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor. Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.
Probab=100.00 E-value=2.6e-37 Score=336.72 Aligned_cols=253 Identities=22% Similarity=0.300 Sum_probs=197.5
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
.+|++.+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|++++++++||||+++++.+.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 80 (376)
T cd05598 1 SMFVKIKTIGIGAFGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 80 (376)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEEEcCCEEEEEE
Confidence 36889999999999999999864 68999999986542 233466888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++...+ .+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|..+....
T Consensus 81 E~~~~g~L~~~i~~~~-~~~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~ 155 (376)
T cd05598 81 DYIPGGDMMSLLIRLG-IFEEDLARFYIAELTCAIESVH----KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 155 (376)
T ss_pred eCCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHEEECCCCCEEEEeCCCCccccccc
Confidence 9999999999998654 3788888999999999999999 6789999999999999999999999999985332100
Q ss_pred C-----------------------------------------cceeecccccccccCCCccCCCCCCccccHHhHHHHHH
Q 003855 657 D-----------------------------------------SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLM 695 (791)
Q Consensus 657 ~-----------------------------------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ 695 (791)
. .......+||+.|+|||++.+..++.++|||||||++|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvily 235 (376)
T cd05598 156 DSKYYQKGDHHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 235 (376)
T ss_pred cccccccccccccccccccccccccccccccchhhhhhhhcccccccccCCCccccCHHHHcCCCCCcceeeeeccceee
Confidence 0 00011246899999999999999999999999999999
Q ss_pred HHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCC---CHHHH
Q 003855 696 ETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRI---NVTDA 772 (791)
Q Consensus 696 elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP---t~~ev 772 (791)
||++|+.||......+. ... +... .... ..+....++.++.+++.+|+ .+|++|+ ++.|+
T Consensus 236 ell~G~~Pf~~~~~~~~-~~~-i~~~-~~~~-------------~~~~~~~~s~~~~~li~~l~-~~p~~R~~~~t~~el 298 (376)
T cd05598 236 EMLVGQPPFLADTPAET-QLK-VINW-ETTL-------------HIPSQAKLSREASDLILRLC-CGAEDRLGKNGADEI 298 (376)
T ss_pred ehhhCCCCCCCCCHHHH-HHH-Hhcc-Cccc-------------cCCCCCCCCHHHHHHHHHHh-cCHhhcCCCCCHHHH
Confidence 99999999976322111 000 0000 0000 00111123455678888876 5999999 88888
Q ss_pred HHH
Q 003855 773 AAK 775 (791)
Q Consensus 773 ~~~ 775 (791)
++.
T Consensus 299 l~h 301 (376)
T cd05598 299 KAH 301 (376)
T ss_pred hCC
Confidence 754
No 166
>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and
Probab=100.00 E-value=7.2e-37 Score=325.88 Aligned_cols=241 Identities=24% Similarity=0.275 Sum_probs=193.6
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEE
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 576 (791)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|..++..+ +||+|+++++++.+.+..++||
T Consensus 1 df~~~~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05616 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVM 80 (323)
T ss_pred CceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEEecCCEEEEEE
Confidence 4788899999999999999875 67899999987643 22334566788888777 5899999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++..... +++..+..++.|++.||+||| +.+|+||||||+|||+++++.+||+|||+++......
T Consensus 81 E~~~~g~L~~~~~~~~~-~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~ 155 (323)
T cd05616 81 EYVNGGDLMYQIQQVGR-FKEPHAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDG 155 (323)
T ss_pred cCCCCCCHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----HCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCC
Confidence 99999999999976543 889999999999999999999 6789999999999999999999999999997543221
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
.......||+.|+|||++.+..++.++|||||||++|||+||+.||..... ......+.. ...
T Consensus 156 --~~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~elltg~~Pf~~~~~--~~~~~~i~~---~~~---------- 218 (323)
T cd05616 156 --VTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDE--DELFQSIME---HNV---------- 218 (323)
T ss_pred --CccccCCCChhhcCHHHhcCCCCCCccchhchhHHHHHHHhCCCCCCCCCH--HHHHHHHHh---CCC----------
Confidence 122334689999999999999999999999999999999999999975321 111111111 000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINV 769 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~ 769 (791)
..+...+.++.+++.+|++.||++|++.
T Consensus 219 -----~~p~~~s~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05616 219 -----AYPKSMSKEAVAICKGLMTKHPGKRLGC 246 (323)
T ss_pred -----CCCCcCCHHHHHHHHHHcccCHHhcCCC
Confidence 0011234567899999999999999984
No 167
>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk. Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr
Probab=100.00 E-value=9.6e-37 Score=314.87 Aligned_cols=253 Identities=24% Similarity=0.426 Sum_probs=204.5
Q ss_pred hhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.++|++.++||+|+||.||+|..++++.||+|.+..... ..+.+.+|+.++++++||||+++++++. .+..++||||+
T Consensus 5 ~~~~~~~~~ig~G~~g~v~~~~~~~~~~~a~K~~~~~~~-~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~ 82 (260)
T cd05067 5 RETLKLVKKLGAGQFGEVWMGYYNGHTKVAIKSLKQGSM-SPEAFLAEANLMKQLQHPRLVRLYAVVT-QEPIYIITEYM 82 (260)
T ss_pred hHHceeeeeeccCccceEEeeecCCCceEEEEEecCCCC-cHHHHHHHHHHHHhcCCcCeeeEEEEEc-cCCcEEEEEcC
Confidence 467899999999999999999988899999999875433 2457888999999999999999999874 45689999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++|+|.+++... +..+++.++..++.|++.||+||| +.+++||||||+||++++++.++++|||++........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 157 (260)
T cd05067 83 ENGSLVDFLKTPEGIKLTINKLIDMAAQIAEGMAFIE----RKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEY- 157 (260)
T ss_pred CCCCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHh----cCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCc-
Confidence 999999998754 345899999999999999999999 67899999999999999999999999999987643221
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
.......++..|+|||+.....++.++||||||+++||+++ |+.||.+.... ...+.+.....
T Consensus 158 ~~~~~~~~~~~y~~pe~~~~~~~~~~~Di~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~~~~-------------- 221 (260)
T cd05067 158 TAREGAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTYGRIPYPGMTNP--EVIQNLERGYR-------------- 221 (260)
T ss_pred ccccCCcccccccCHHHhccCCcCcccchHHHHHHHHHHHhCCCCCCCCCChH--HHHHHHHcCCC--------------
Confidence 12222345678999999988889999999999999999999 99999753221 11111111000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
.+.+..++.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 259 (260)
T cd05067 222 ---MPRPDNCPEELYELMRLCWKEKPEERPTFEYLRSVLED 259 (260)
T ss_pred ---CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHHHHhhc
Confidence 01112344678899999999999999999999999874
No 168
>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=8e-37 Score=316.82 Aligned_cols=254 Identities=22% Similarity=0.331 Sum_probs=201.6
Q ss_pred hhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
.++|++.+.||+|+||.||+|+. .+++.||+|++..........+.+|+.++++++||||+++++++...+..++||||
T Consensus 8 ~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~~~~~~~~iv~e~ 87 (267)
T cd06646 8 QHDYELIQRVGSGTYGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSYLSREKLWICMEY 87 (267)
T ss_pred hhhcchhheeecCCCeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEEEeCCEEEEEEeC
Confidence 35799999999999999999996 47889999998765545556788899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++++|.++++... .+++..+..++.|++.|+.||| +.+|+|||++|+||++++++.++|+|||+++.......
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~- 161 (267)
T cd06646 88 CGGGSLQDIYHVTG-PLSELQIAYVCRETLQGLAYLH----SKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIA- 161 (267)
T ss_pred CCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCCEEECcCccceeeccccc-
Confidence 99999999987554 4789999999999999999999 67899999999999999999999999999986643221
Q ss_pred ceeecccccccccCCCccC---CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 659 VTQTMTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
......++..|+|||.+. ...++.++|||||||++|||++|+.||......+. ...+.. .... .+..
T Consensus 162 -~~~~~~~~~~y~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~~~~~-~~~~~~----~~~~---~~~~- 231 (267)
T cd06646 162 -KRKSFIGTPYWMAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMSK----SNFQ---PPKL- 231 (267)
T ss_pred -ccCccccCccccCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccchhhh-heeeec----CCCC---CCCC-
Confidence 122345788999999863 45578899999999999999999999864321111 000000 0000 0000
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.....++..+.+++.+||+.+|++||++.++++.
T Consensus 232 ------~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 265 (267)
T cd06646 232 ------KDKTKWSSTFHNFVKISLTKNPKKRPTAERLLTH 265 (267)
T ss_pred ------ccccccCHHHHHHHHHHhhCChhhCcCHHHHhcC
Confidence 0011244678899999999999999999999864
No 169
>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C. Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re
Probab=100.00 E-value=8.1e-37 Score=324.57 Aligned_cols=241 Identities=24% Similarity=0.272 Sum_probs=194.1
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. +++.||||++.... ......+..|..+++.+ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (318)
T cd05570 1 KVLGKGSFGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCFQTKDRLFFVMEYVNG 80 (318)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 46999999999999875 68899999997653 23445677888898888 799999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++.... .+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++....... ..
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~--~~ 153 (318)
T cd05570 81 GDLMFHIQRSG-RFDEPRARFYAAEIVLGLQFLH----ERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGV--TT 153 (318)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCC--cc
Confidence 99999987654 4899999999999999999999 67899999999999999999999999999875322211 12
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....|++.|+|||++.+..++.++|||||||++|||++|+.||..... ......+.. ...
T Consensus 154 ~~~~g~~~y~aPE~~~~~~~~~~~DiwslGvil~~l~~G~~pf~~~~~--~~~~~~i~~---~~~--------------- 213 (318)
T cd05570 154 STFCGTPDYIAPEILSYQPYGPAVDWWALGVLLYEMLAGQSPFEGDDE--DELFQSILE---DEV--------------- 213 (318)
T ss_pred cceecCccccCHHHhcCCCCCcchhhhhHHHHHHHHhhCCCCCCCCCH--HHHHHHHHc---CCC---------------
Confidence 234689999999999999999999999999999999999999975321 111111110 000
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCH-----HHHHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINV-----TDAAA 774 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~-----~ev~~ 774 (791)
..+..++..+.+++.+||+.||++||++ .++++
T Consensus 214 ~~~~~~~~~~~~li~~~l~~dP~~R~s~~~~~~~~ll~ 251 (318)
T cd05570 214 RYPRWLSKEAKSILKSFLTKNPEKRLGCLPTGEQDIKG 251 (318)
T ss_pred CCCCcCCHHHHHHHHHHccCCHHHcCCCCCCCHHHHhc
Confidence 0011244667899999999999999999 77764
No 170
>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=1.6e-36 Score=319.18 Aligned_cols=250 Identities=24% Similarity=0.323 Sum_probs=203.6
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.+|+..+.||+|+||.||+|... +++.||+|.+........+.+..|+.+++.++||||+++++++..+...++||||+
T Consensus 20 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~~~~~~~~lv~e~~ 99 (296)
T cd06654 20 KKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYL 99 (296)
T ss_pred cceeeEEEecCCCCeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEEEeCCEEEEeeccc
Confidence 57888999999999999999864 78999999987665555677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
++++|.+++... .+++.++..++.|++.||+||| +.+|+||||||+||+++.++.++|+|||+++.......
T Consensus 100 ~~~~L~~~~~~~--~~~~~~~~~i~~ql~~aL~~LH----~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~-- 171 (296)
T cd06654 100 AGGSLTDVVTET--CMDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 171 (296)
T ss_pred CCCCHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEcCCCCEEECccccchhcccccc--
Confidence 999999998754 3788999999999999999999 67899999999999999999999999999886543221
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
......+++.|+|||...+..++.++|||||||++|||++|+.||...... ..+... ........
T Consensus 172 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~----~~~~~~-~~~~~~~~---------- 236 (296)
T cd06654 172 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPYLNENPL----RALYLI-ATNGTPEL---------- 236 (296)
T ss_pred ccCcccCCccccCHHHHcCCCCCccchHHHHHHHHHHHHhCCCCCCCCCHH----HhHHHH-hcCCCCCC----------
Confidence 122346888999999998888999999999999999999999999653221 111110 00000000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..+...+..+.+++.+||..+|++||++.|+++.
T Consensus 237 --~~~~~~~~~l~~li~~~l~~~p~~Rpt~~eil~~ 270 (296)
T cd06654 237 --QNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQH 270 (296)
T ss_pred --CCccccCHHHHHHHHHHCcCCcccCcCHHHHhhC
Confidence 0011344567899999999999999999999873
No 171
>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase. Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions
Probab=100.00 E-value=1.8e-36 Score=314.81 Aligned_cols=257 Identities=23% Similarity=0.393 Sum_probs=206.1
Q ss_pred hccccccccCCCcceEEEEEEecC----CcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISD----GTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
++|...+.||+|+||.||+|...+ ...||||...... ....+.+.+|+.++++++||||+++++++.+ ...++|
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~-~~~~lv 84 (270)
T cd05056 6 EDITLGRCIGEGQFGDVYQGVYMSPENEKIAVAVKTCKNCTSPSVREKFLQEAYIMRQFDHPHIVKLIGVITE-NPVWIV 84 (270)
T ss_pred hhceeeeeeCCccceeEEEEEEecCCCCCcceEEEecCCcCCHHHHHHHHHHHHHHHhCCCCchhceeEEEcC-CCcEEE
Confidence 568888999999999999998643 3468999887554 4456788999999999999999999999875 456899
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
|||+++|+|.+++......+++..+..++.+++.|++||| +.+++||||||+||+++.++.++++|||+++.....
T Consensus 85 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~ 160 (270)
T cd05056 85 MELAPLGELRSYLQVNKYSLDLASLILYSYQLSTALAYLE----SKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDE 160 (270)
T ss_pred EEcCCCCcHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccChheEEEecCCCeEEccCceeeecccc
Confidence 9999999999999876656899999999999999999999 678999999999999999999999999999866443
Q ss_pred CCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
.. .......++..|+|||......++.++||||||+++||+++ |..||......+ ...++... .
T Consensus 161 ~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~~--~~~~~~~~--~---------- 225 (270)
T cd05056 161 SY-YKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMLGVKPFQGVKNND--VIGRIENG--E---------- 225 (270)
T ss_pred cc-eecCCCCccccccChhhhccCCCCchhhhHHHHHHHHHHHHcCCCCCCCCCHHH--HHHHHHcC--C----------
Confidence 21 11222234568999999888889999999999999999996 999987543221 11111100 0
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
..+.+..++..+.+++.+|+..+|++|||+.++++.|..++..
T Consensus 226 -----~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~~~~l~~~~~~ 268 (270)
T cd05056 226 -----RLPMPPNCPPTLYSLMTKCWAYDPSKRPRFTELKAQLSDILQE 268 (270)
T ss_pred -----cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 0011124556788999999999999999999999999988653
No 172
>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found
Probab=100.00 E-value=9.6e-37 Score=329.66 Aligned_cols=254 Identities=20% Similarity=0.287 Sum_probs=199.4
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
..++|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++...++
T Consensus 41 ~~~~y~~~~~lG~G~fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~~~~~l 120 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM 120 (370)
T ss_pred CHHHCeEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEE
Confidence 4578999999999999999999975 68899999986532 2334567889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||+++|+|.+++.... +++..+..++.||+.||+||| +.+|+||||||+|||+++++.+||+|||+|+....
T Consensus 121 v~Ey~~gg~L~~~l~~~~--~~~~~~~~~~~qil~aL~~LH----~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~ 194 (370)
T cd05621 121 VMEYMPGGDLVNLMSNYD--VPEKWAKFYTAEVVLALDAIH----SMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDE 194 (370)
T ss_pred EEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEECCCCCEEEEecccceeccc
Confidence 999999999999997653 788899999999999999999 67899999999999999999999999999987643
Q ss_pred CCCcceeecccccccccCCCccCCC----CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEG----IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
... ......+||+.|+|||++.+. .++.++||||+||++|||++|+.||..... ...+.+...... .
T Consensus 195 ~~~-~~~~~~~gt~~Y~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~-~~~~~~i~~~~~--~----- 265 (370)
T cd05621 195 TGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSL-VGTYSKIMDHKN--S----- 265 (370)
T ss_pred CCc-eecccCCCCcccCCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCH-HHHHHHHHhCCc--c-----
Confidence 222 122345699999999987653 378899999999999999999999975321 111111111000 0
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDM--RINVTDAAAK 775 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPt~~ev~~~ 775 (791)
...+.....+..+.+++..|+..+|.+ ||++.|+++.
T Consensus 266 --------~~~p~~~~~s~~~~~li~~~L~~~~~r~~R~~~~e~l~h 304 (370)
T cd05621 266 --------LNFPEDVEISKHAKNLICAFLTDREVRLGRNGVEEIKQH 304 (370)
T ss_pred --------cCCCCcccCCHHHHHHHHHHccCchhccCCCCHHHHhcC
Confidence 001111234566778999999865543 8899998874
No 173
>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut
Probab=100.00 E-value=1.2e-36 Score=318.63 Aligned_cols=271 Identities=27% Similarity=0.390 Sum_probs=208.7
Q ss_pred hccccccccCCCcceEEEEEEec-----CCcEEEEEEeehhhhH-HHHHHHHHHHHHHhccCCccceeeeeecc--CCee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-----DGTDVAIKIFNLQLER-AFRSFDSECEVLRNVRHRNLIKILSSCSN--PDFK 572 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-----~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 572 (791)
+.|+..+.||+|+||.||+|++. ++..||||++...... ..+.+.+|+++++.+.||||+++++++.. ....
T Consensus 4 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~ei~~l~~l~~~~i~~~~~~~~~~~~~~~ 83 (284)
T cd05038 4 RHLKFIKQLGEGHFGKVELCRYDPLGDNTGEQVAVKSLNHSGEEQHRSDFEREIEILRTLDHENIVKYKGVCEKPGGRSL 83 (284)
T ss_pred hhchhheeeccCCCeeEEEeeecCCCCCCceEEEEEEeccccchHHHHHHHHHHHHHHhCCCCChheEEeeeecCCCCce
Confidence 45777889999999999999853 3688999998765443 56789999999999999999999999877 5678
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++||||+++++|.+++......+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++|||.+...
T Consensus 84 ~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 159 (284)
T cd05038 84 RLIMEYLPSGSLRDYLQRHRDQINLKRLLLFSSQICKGMDYLG----SQRYIHRDLAARNILVESEDLVKISDFGLAKVL 159 (284)
T ss_pred EEEEecCCCCCHHHHHHhCccccCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHhEEEcCCCCEEEccccccccc
Confidence 9999999999999999877666999999999999999999999 678999999999999999999999999999877
Q ss_pred CCCCCcce-eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 653 GEGEDSVT-QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 653 ~~~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
........ .....++..|+|||...+..++.++||||||+++|||+||+.|+......... +............+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~el~tg~~p~~~~~~~~~~---~~~~~~~~~~~~~~~ 236 (284)
T cd05038 160 PEDKDYYYVKEPGESPIFWYAPECLRTSKFSSASDVWSFGVTLYELFTYGDPSQSPPAEFLR---MIGIAQGQMIVTRLL 236 (284)
T ss_pred ccCCcceeccCCCCCcccccCcHHHccCCCCcccchHHHhhhhheeeccCCCcccccchhcc---ccccccccccHHHHH
Confidence 53322211 11223456799999998889999999999999999999999987653221110 000000000000000
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+. .....+.+..++.++.+++.+||+.+|++||++.||+++|+.+
T Consensus 237 ~~~~-~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~~l~~i 283 (284)
T cd05038 237 ELLK-EGERLPRPPSCPDEVYDLMKLCWEAEPQDRPSFADLILIVDRL 283 (284)
T ss_pred HHHH-cCCcCCCCccCCHHHHHHHHHHhccChhhCCCHHHHHHHHhhc
Confidence 0000 0011112234567789999999999999999999999999876
No 174
>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a
Probab=100.00 E-value=1.5e-36 Score=312.72 Aligned_cols=249 Identities=27% Similarity=0.369 Sum_probs=205.2
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
++|+..+.||+|+||.||+|... +++.||+|.+..... .+.+.+|++++++++||||+++++++.+....++++||+
T Consensus 3 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~--~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~ 80 (256)
T cd06612 3 EVFDILEKLGEGSYGSVYKAIHKETGQVVAIKVVPVEED--LQEIIKEISILKQCDSPYIVKYYGSYFKNTDLWIVMEYC 80 (256)
T ss_pred ccchhhhhhcCCCCeEEEEEEEcCCCcEEEEEEeecHHH--HHHHHHHHHHHHhCCCCcEeeeeeeeecCCcEEEEEecC
Confidence 57889999999999999999976 488999999875533 578999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
++++|.+++......+++..+..++.|++.|+.||| ..+++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~L~~~l~~~~~~l~~~~~~~~~~~l~~~l~~lh----~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~-- 154 (256)
T cd06612 81 GAGSVSDIMKITNKTLTEEEIAAILYQTLKGLEYLH----SNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMA-- 154 (256)
T ss_pred CCCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcceEEECCCCcEEEcccccchhcccCcc--
Confidence 999999999876667899999999999999999999 67899999999999999999999999999987654321
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
......++..|+|||++.+..++.++||||||+++|||++|+.||......+... .+......
T Consensus 155 ~~~~~~~~~~y~~PE~~~~~~~~~~~Di~s~G~il~~l~~g~~p~~~~~~~~~~~--~~~~~~~~--------------- 217 (256)
T cd06612 155 KRNTVIGTPFWMAPEVIQEIGYNNKADIWSLGITAIEMAEGKPPYSDIHPMRAIF--MIPNKPPP--------------- 217 (256)
T ss_pred ccccccCCccccCHHHHhcCCCCchhhHHHHHHHHHHHHhCCCCCCCcchhhhhh--hhccCCCC---------------
Confidence 2223457889999999988899999999999999999999999987532221100 00000000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
....+..++..+.+++.+|++.+|++||++.|+++
T Consensus 218 ~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~il~ 252 (256)
T cd06612 218 TLSDPEKWSPEFNDFVKKCLVKDPEERPSAIQLLQ 252 (256)
T ss_pred CCCchhhcCHHHHHHHHHHHhcChhhCcCHHHHhc
Confidence 00111234466889999999999999999999985
No 175
>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase. Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina
Probab=100.00 E-value=3.7e-36 Score=312.04 Aligned_cols=255 Identities=27% Similarity=0.344 Sum_probs=201.3
Q ss_pred HHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 497 QRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 497 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
+.+++++.....||+|+||.||+|+.. +++.||+|.+........+.+.+|+.++++++||||+++++++..++..++|
T Consensus 4 ~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv 83 (268)
T cd06624 4 EYEYDENGERVVLGKGTYGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSDSENGFFKIF 83 (268)
T ss_pred ccccccCCceEEEecCCceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeeeccCCEEEEE
Confidence 344566666779999999999999864 6788999998766656667889999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCC--CHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC-CCcEEEeeecccccc
Q 003855 576 LEFMPNGSLEKWLYSHNYFL--DILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE-NMAAHVSDFGISKLL 652 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfgla~~~ 652 (791)
+||+++++|.+++......+ ++..+..++.|++.|++||| +.+|+||||||+||+++. ++.++|+|||++...
T Consensus 84 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~ 159 (268)
T cd06624 84 MEQVPGGSLSALLRSKWGPLKDNEQTIIFYTKQILEGLKYLH----DNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRL 159 (268)
T ss_pred EecCCCCCHHHHHHHhcccCCCcHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCeEEEecchhheec
Confidence 99999999999998654435 78888999999999999999 678999999999999986 679999999999765
Q ss_pred CCCCCcceeecccccccccCCCccCCCC--CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 653 GEGEDSVTQTMTMATIGYMAPEYGSEGI--VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 653 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
..... ......++..|+|||+..... ++.++||||||+++|||++|+.||........ ..+.......
T Consensus 160 ~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~~~~~~--~~~~~~~~~~------ 229 (268)
T cd06624 160 AGINP--CTETFTGTLQYMAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIELGEPQA--AMFKVGMFKI------ 229 (268)
T ss_pred ccCCC--ccccCCCCccccChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccccChhh--hHhhhhhhcc------
Confidence 43221 122235788999999876543 78899999999999999999999865322111 1110000000
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.+ ..+..++.++.+++.+||+.+|++|||+.|+++
T Consensus 230 ~~---------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 264 (268)
T cd06624 230 HP---------EIPESLSAEAKNFILRCFEPDPDKRASAHDLLQ 264 (268)
T ss_pred CC---------CCCcccCHHHHHHHHHHcCCCchhCCCHHHHHh
Confidence 00 011134466789999999999999999999875
No 176
>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t
Probab=100.00 E-value=2.1e-36 Score=313.07 Aligned_cols=252 Identities=24% Similarity=0.320 Sum_probs=201.6
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-----hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-----ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
++|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|++++++++||||+++++++.+.+..++
T Consensus 2 ~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~lk~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~ 81 (263)
T cd06625 2 TNWRRGKLLGQGAFGRVYLCYDVDTGRELAVKQVPFDPDSPETKKEVNALECEIQLLKNLQHERIVQYYGCLRDDETLSI 81 (263)
T ss_pred CcccccceecCCCceEEEEEEEcCCCcEEEEEEEeecccchhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEccCCeEEE
Confidence 56889999999999999999864 68999999876432 2234578889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
|+||+++++|.+++.... .+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++|+|||+++....
T Consensus 82 v~e~~~~~~l~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~ 156 (263)
T cd06625 82 FMEYMPGGSVKDQLKAYG-ALTETVTRKYTRQILEGVEYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQT 156 (263)
T ss_pred EEEECCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeecccceeccc
Confidence 999999999999998654 3788899999999999999999 67899999999999999999999999999986543
Q ss_pred CCCcce-eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 655 GEDSVT-QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 655 ~~~~~~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
...... .....++..|+|||...+..++.++||||+|+++|||++|+.||...... ....+ .. .....
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~-~~--~~~~~------- 225 (263)
T cd06625 157 ICSSGTGMKSVTGTPYWMSPEVISGEGYGRKADVWSVGCTVVEMLTEKPPWAEFEAM-AAIFK-IA--TQPTN------- 225 (263)
T ss_pred cccccccccCCCcCccccCcceeccCCCCchhhhHHHHHHHHHHHhCCCCccccchH-HHHHH-Hh--ccCCC-------
Confidence 221111 12345778999999999888999999999999999999999998653111 11111 00 00000
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
...+..++..+.+++.+||..+|++|||+.|+++.
T Consensus 226 -------~~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~~ 260 (263)
T cd06625 226 -------PQLPSHVSPDARNFLRRTFVENAKKRPSAEELLRH 260 (263)
T ss_pred -------CCCCccCCHHHHHHHHHHhhcCcccCCCHHHHhhC
Confidence 00111345667899999999999999999999863
No 177
>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play
Probab=100.00 E-value=1.9e-36 Score=320.79 Aligned_cols=265 Identities=18% Similarity=0.281 Sum_probs=201.2
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|...+.||+|+||.||+|+.+ +++.||+|.+.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 85 (309)
T cd07872 6 ETYIKLEKLGEGTYATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIVHTDKSLTLVFEY 85 (309)
T ss_pred CceEEEEEecccCCEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEEeeCCeEEEEEeC
Confidence 57899999999999999999865 68889999986543 22334577899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++ ++.+++......+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++.......
T Consensus 86 ~~~-~l~~~~~~~~~~~~~~~~~~~~~qi~~aL~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~- 159 (309)
T cd07872 86 LDK-DLKQYMDDCGNIMSMHNVKIFLYQILRGLAYCH----RRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTK- 159 (309)
T ss_pred CCC-CHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECccccceecCCCcc-
Confidence 975 899998876666899999999999999999999 67899999999999999999999999999976433221
Q ss_pred ceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC----hhhhcc--
Q 003855 659 VTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG----LTEVVD-- 731 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~d-- 731 (791)
......++..|+|||.+.+ ..++.++||||+||++|||+||+.||...... ..+..... ..... +.....
T Consensus 160 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (309)
T cd07872 160 -TYSNEVVTLWYRPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVE-DELHLIFR-LLGTPTEETWPGISSND 236 (309)
T ss_pred -ccccccccccccCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH-HhCCCCHHHHhhhcchh
Confidence 1223457889999998754 56899999999999999999999999753221 11111111 11000 000000
Q ss_pred ----hhhhhh--HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 ----ANLVRE--EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 ----~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...... .........++.++.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~ 285 (309)
T cd07872 237 EFKNYNFPKYKPQPLINHAPRLDTEGIELLTKFLQYESKKRISAEEAMK 285 (309)
T ss_pred hhhhhhcCccCCCchhhhccCCCHHHHHHHHHhccCChhhCCCHHHHhc
Confidence 000000 0000111234567889999999999999999999987
No 178
>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk
Probab=100.00 E-value=4.9e-36 Score=308.84 Aligned_cols=250 Identities=29% Similarity=0.470 Sum_probs=205.6
Q ss_pred hhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.++|+..+.||+|+||.||+|... |+.||+|.+..... ..+.+..|+.++++++|+||+++++++.+.+..++||||+
T Consensus 5 ~~~~~~~~~ig~g~~g~v~~~~~~-~~~v~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 82 (256)
T cd05039 5 SKELKLGATIGKGEFGDVMLGDYR-GQKVAVKCLKDDST-AAQAFLAEASVMTTLRHPNLVQLLGVVLQGNPLYIVTEYM 82 (256)
T ss_pred hhhccceeeeecCCCceEEEEEec-CcEEEEEEeccchh-HHHHHHHHHHHHHhcCCcceeeeEEEEcCCCCeEEEEEec
Confidence 457888999999999999999874 78999999876644 4577889999999999999999999999899999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++++|.+++.... ..+++..+..++.|++.|+.||| ..+++||||||+||+++.++.++|+|||.++.......
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lh----~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~- 157 (256)
T cd05039 83 AKGSLVDYLRSRGRAVITLAQQLGFALDVCEGMEYLE----EKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQD- 157 (256)
T ss_pred CCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCccchhcccceEEEeCCCCEEEcccccccccccccc-
Confidence 9999999998654 35899999999999999999999 67899999999999999999999999999987632211
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
....+..|+|||+...+.++.++||||||+++||+++ |..||..... ......+......
T Consensus 158 ----~~~~~~~~~ape~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~------------- 218 (256)
T cd05039 158 ----SGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPHVEKGYRM------------- 218 (256)
T ss_pred ----cCCCcccccCchhhcCCcCCcHHHHHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhcCCCC-------------
Confidence 2234668999999988889999999999999999997 9999865321 1111111110000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
..+..++..+.+++.+|+..+|++||++.|++++|.++
T Consensus 219 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~~ 256 (256)
T cd05039 219 ----EAPEGCPPEVYKVMKDCWELDPAKRPTFKQLREQLALI 256 (256)
T ss_pred ----CCccCCCHHHHHHHHHHhccChhhCcCHHHHHHHHhcC
Confidence 00113456788999999999999999999999999753
No 179
>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase. Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and
Probab=100.00 E-value=1.6e-36 Score=312.75 Aligned_cols=248 Identities=26% Similarity=0.386 Sum_probs=200.3
Q ss_pred cccCCCcceEEEEEEecC--C--cEEEEEEeehhhh-HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTISD--G--TDVAIKIFNLQLE-RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~--~--~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|++|.||+|.+.+ + ..||||.+..... ...+.+..|+.++++++||||+++++++.+ ...++||||+++
T Consensus 1 ~~ig~g~~~~v~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~-~~~~~v~e~~~~ 79 (257)
T cd05040 1 KKLGDGSFGVVRRGEWSTSGGKVIPVAVKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVVLT-HPLMMVTELAPL 79 (257)
T ss_pred CcCCccCcccEEeeeEecCCCCceEEEEeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEEcC-CeEEEEEEecCC
Confidence 468999999999998743 3 3699999876655 567789999999999999999999999988 888999999999
Q ss_pred CCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc-
Q 003855 582 GSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV- 659 (791)
Q Consensus 582 g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~- 659 (791)
|+|.+++.... ..+++..+..++.|++.||.||| ..+++||||+|+||+++.++.+||+|||+++.+.......
T Consensus 80 ~~L~~~l~~~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~ 155 (257)
T cd05040 80 GSLLDRLRKDALGHFLISTLCDYAVQIANGMRYLE----SKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYV 155 (257)
T ss_pred CcHHHHHHhcccccCcHHHHHHHHHHHHHHHHHHH----hCCccccccCcccEEEecCCEEEecccccccccccccccee
Confidence 99999998765 56899999999999999999999 6789999999999999999999999999998775432221
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
......++..|+|||+..+..++.++|||||||++|||++ |+.||...... .....+.... .
T Consensus 156 ~~~~~~~~~~y~~pE~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~--~~~~~~~~~~-~-------------- 218 (257)
T cd05040 156 MEEHLKVPFAWCAPESLRTRTFSHASDVWMFGVTLWEMFTYGEEPWAGLSGS--QILKKIDKEG-E-------------- 218 (257)
T ss_pred cccCCCCCceecCHHHhcccCcCchhhhHHHHHHHHHHHhCCCCCCCCCCHH--HHHHHHHhcC-C--------------
Confidence 1122356788999999988889999999999999999999 99998653211 1111111100 0
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
....+..++..+.+++.+|++.+|++||++.|+++.|.
T Consensus 219 -~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~~~~~l~ 256 (257)
T cd05040 219 -RLERPEACPQDIYNVMLQCWAHNPADRPTFAALREFLP 256 (257)
T ss_pred -cCCCCccCCHHHHHHHHHHCCCCcccCCCHHHHHHHhc
Confidence 00011134567889999999999999999999999875
No 180
>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase. Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.
Probab=100.00 E-value=2e-36 Score=316.53 Aligned_cols=250 Identities=25% Similarity=0.332 Sum_probs=200.6
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
.|++.+.||+|+||.||+|... ++..+++|.+........+.+..|+++++.++|||++++++++......++|+||++
T Consensus 6 ~~~i~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~~v~e~~~ 85 (282)
T cd06643 6 FWEIIGELGDGAFGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYENNLWILIEFCA 85 (282)
T ss_pred HHHHHhhcccCCCeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEEeeCCEEEEEEEecC
Confidence 3677889999999999999975 578889999876555566788899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+|+|..++......+++..+..++.|+++||.||| +.+++||||||+||+++.++.+|++|||++........ .
T Consensus 86 ~~~l~~~~~~~~~~l~~~~~~~~~~qi~~~L~~LH----~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~--~ 159 (282)
T cd06643 86 GGAVDAVMLELERPLTEPQIRVVCKQTLEALNYLH----ENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQ--R 159 (282)
T ss_pred CCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCcccEEEccCCCEEEcccccccccccccc--c
Confidence 99999988765566899999999999999999999 67899999999999999999999999999976533211 1
Q ss_pred eecccccccccCCCccC-----CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 661 QTMTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
.....++..|+|||++. +..++.++|||||||++|||++|+.||......+ ..........+ ..
T Consensus 160 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~-~~~~~~~~~~~----~~------ 228 (282)
T cd06643 160 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMR-VLLKIAKSEPP----TL------ 228 (282)
T ss_pred cccccccccccCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHH-HHHHHhhcCCC----CC------
Confidence 22345888999999873 4557889999999999999999999986532111 11111110000 00
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+..++.++.+++.+||+.+|++||++.++++
T Consensus 229 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 261 (282)
T cd06643 229 ------AQPSRWSSEFKDFLKKCLEKNVDARWTTTQLLQ 261 (282)
T ss_pred ------CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011124456789999999999999999999875
No 181
>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2. Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A
Probab=100.00 E-value=1.2e-36 Score=321.27 Aligned_cols=257 Identities=30% Similarity=0.490 Sum_probs=201.7
Q ss_pred hhccccccccCCCcceEEEEEEec-CCc--EEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGT--DVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 574 (791)
.++|++.+.||+|+||.||+|..+ ++. .+|+|.+.... ....+.+.+|+.++.++ +||||+++++++...+..++
T Consensus 6 ~~~~~~~~~lg~G~~g~V~~a~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~~~~~~~~l 85 (303)
T cd05088 6 WNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYL 85 (303)
T ss_pred hhhceeeeeecCCCCceEEEEEEccCCceeeEEEEEecccCCHHHHHHHHHHHHHHHHhcCCCCcceEEEEECCCCCceE
Confidence 357888999999999999999864 454 45777765432 34456788899999999 89999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC
Q 003855 575 VLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM 639 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~ 639 (791)
||||+++|+|.++++... ..+++.++..++.|++.|++||| +.+++||||||+||++++++
T Consensus 86 v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~gi~H~dlkp~Nili~~~~ 161 (303)
T cd05088 86 AIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNILVGENY 161 (303)
T ss_pred EEEeCCCCcHHHHHHhcccccccccccccccccCcCCHHHHHHHHHHHHHHHHHHH----hCCccccccchheEEecCCC
Confidence 999999999999997432 24789999999999999999999 67999999999999999999
Q ss_pred cEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHH
Q 003855 640 AAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWV 718 (791)
Q Consensus 640 ~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~ 718 (791)
.+||+|||+++.... ........++..|+|||+..+..++.++|||||||++|||+| |..||...... ...+.+
T Consensus 162 ~~kl~dfg~~~~~~~---~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~ellt~g~~p~~~~~~~--~~~~~~ 236 (303)
T cd05088 162 VAKIADFGLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA--ELYEKL 236 (303)
T ss_pred cEEeCccccCcccch---hhhcccCCCcccccCHHHHhccCCcccccchhhhhHHHHHHhcCCCCcccCChH--HHHHHH
Confidence 999999999864321 111112234667999999888889999999999999999998 99998643211 111111
Q ss_pred HHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 719 KESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 719 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
+... ....+..++..+.+++.+|++.+|++||++.++++.++++...
T Consensus 237 ----~~~~-------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~l~~~~~~ 283 (303)
T cd05088 237 ----PQGY-------------RLEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRMLEE 283 (303)
T ss_pred ----hcCC-------------cCCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHHh
Confidence 1100 0001112345678999999999999999999999999887443
No 182
>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells
Probab=100.00 E-value=3e-36 Score=312.86 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=190.7
Q ss_pred cccCCCcceEEEEEEecC---CcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCC
Q 003855 507 NLLGTGSFGSVYKGTISD---GTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNG 582 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 582 (791)
+.||+|+||.||+|...+ +..+|+|.+.... ......+.+|+.++++++||||+++++++.+....++||||+++|
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~g 80 (269)
T cd05087 1 KEIGNGWFGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQCTEVTPYLLVMEFCPLG 80 (269)
T ss_pred CcccccCCceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEEcCCCCcEEEEECCCCC
Confidence 369999999999998643 4578999876543 233457888999999999999999999999989999999999999
Q ss_pred CHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 583 SLEKWLYSHN----YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 583 ~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+|.++++... ...++..+..++.|++.|++||| +.+++||||||+||++++++++|++|||+++........
T Consensus 81 ~L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~ 156 (269)
T cd05087 81 DLKGYLRSCRKAELMTPDPTTLQRMACEIALGLLHLH----KNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYY 156 (269)
T ss_pred cHHHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH----HCCEeccccCcceEEEcCCCcEEECCccccccccCccee
Confidence 9999997532 24567788899999999999999 678999999999999999999999999999765433222
Q ss_pred ceeecccccccccCCCccCCC-------CCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 659 VTQTMTMATIGYMAPEYGSEG-------IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~-------~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
.......++..|+|||++... .++.++||||||+++|||++ |+.||......+. ..+. .........
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~--~~~~---~~~~~~~~~ 231 (269)
T cd05087 157 VTPDQLWVPLRWIAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQV--LTYT---VREQQLKLP 231 (269)
T ss_pred ecCCCcCCcccccCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHH--HHHH---hhcccCCCC
Confidence 222334577889999987532 35789999999999999996 9999975332211 1110 000000111
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
++.+. ...+..+.+++..|+ .+|++|||+.||++.|.
T Consensus 232 ~~~~~---------~~~~~~~~~l~~~c~-~~P~~Rpt~~~l~~~l~ 268 (269)
T cd05087 232 KPRLK---------LPLSDRWYEVMQFCW-LQPEQRPSAEEVHLLLS 268 (269)
T ss_pred CCccC---------CCCChHHHHHHHHHh-cCcccCCCHHHHHHHhc
Confidence 11110 012345678999998 68999999999998764
No 183
>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4. Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin
Probab=100.00 E-value=1.3e-36 Score=321.04 Aligned_cols=259 Identities=26% Similarity=0.455 Sum_probs=205.4
Q ss_pred hhccccccccCCCcceEEEEEEec-CCc----EEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeee
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGT----DVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~----~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 573 (791)
.++|+..+.||+|+||.||+|.+. ++. .||+|.+.... ......+.+|+.+++.++||||+++++++..+ ..+
T Consensus 6 ~~~~~~~~~lg~G~~g~vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~-~~~ 84 (303)
T cd05110 6 ETELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSP-TIQ 84 (303)
T ss_pred hhhceeccccccCCCccEEEEEEecCCCcceeeEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcccEEEEEcCC-Cce
Confidence 356888899999999999999864 444 57888876543 23345688899999999999999999998754 467
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
+|+||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++.+.
T Consensus 85 ~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~ 160 (303)
T cd05110 85 LVTQLMPHGCLLDYVHEHKDNIGSQLLLNWCVQIAKGMMYLE----ERRLVHRDLAARNVLVKSPNHVKITDFGLARLLE 160 (303)
T ss_pred eeehhcCCCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHh----hcCeeccccccceeeecCCCceEEcccccccccc
Confidence 899999999999999877666899999999999999999999 6789999999999999999999999999998765
Q ss_pred CCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcch
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
............++..|+|||++.+..++.++|||||||++||+++ |+.||.+.. .....+++.....
T Consensus 161 ~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~DiwslG~~l~el~t~g~~p~~~~~--~~~~~~~~~~~~~--------- 229 (303)
T cd05110 161 GDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIP--TREIPDLLEKGER--------- 229 (303)
T ss_pred CcccccccCCCccccccCCHHHhccCCCChHHHHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHHCCCC---------
Confidence 4332222223345678999999988889999999999999999997 889986532 1222222221100
Q ss_pred hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 733 NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
.+....++..+.+++.+||..+|++||++.++++.++++...
T Consensus 230 --------~~~~~~~~~~~~~li~~c~~~~p~~Rp~~~~l~~~l~~~~~~ 271 (303)
T cd05110 230 --------LPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFSRMARD 271 (303)
T ss_pred --------CCCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHHHHhc
Confidence 001112345678999999999999999999999999987544
No 184
>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan
Probab=100.00 E-value=1.9e-36 Score=313.05 Aligned_cols=248 Identities=30% Similarity=0.530 Sum_probs=204.2
Q ss_pred cccCCCcceEEEEEEecC----CcEEEEEEeehhhhH-HHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTISD----GTDVAIKIFNLQLER-AFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|.... +..||+|++...... ..+.+.+|+++++.++|+||+++++++.+....++||||+++
T Consensus 1 ~~ig~g~~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (262)
T cd00192 1 KKLGEGAFGEVYKGKLKGKDGKTTEVAVKTLKEDASEEERKDFLKEARVMKKLGHPNVVRLLGVCTEEEPLYLVLEYMEG 80 (262)
T ss_pred CccccCCceEEEEEEEecCCCCCceEEeEeeccccchhHHHHHHHHHHHHhhcCCCChheeeeeecCCCceEEEEEeccC
Confidence 469999999999999753 788999998765433 367889999999999999999999999999999999999999
Q ss_pred CCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 582 GSLEKWLYSH--------NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 582 g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
++|.+++... ...+++..+..++.|+++|++||| +.+++||||+|+||++++++.++|+|||.++...
T Consensus 81 ~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~ 156 (262)
T cd00192 81 GDLLDYLRKSRPVFPSPEKSTLSLKDLLSFAIQIAKGMEYLA----SKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVY 156 (262)
T ss_pred CcHHHHHhhccccccccccccCCHHHHHHHHHHHHHHHHHHH----cCCcccCccCcceEEECCCCcEEEcccccccccc
Confidence 9999999876 466899999999999999999999 6789999999999999999999999999998776
Q ss_pred CCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcch
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
............++..|+|||......++.++||||+|+++|||++ |..||..... ....+.+.. .
T Consensus 157 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~~g~~p~~~~~~--~~~~~~~~~----~------- 223 (262)
T cd00192 157 DDDYYRKKTGGKLPIRWMAPESLKDGIFTSKSDVWSFGVLLWEIFTLGATPYPGLSN--EEVLEYLRK----G------- 223 (262)
T ss_pred cccccccccCCCcCccccCHHHhccCCcchhhccHHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHHc----C-------
Confidence 5433223334457889999999888889999999999999999999 6899876421 111111111 0
Q ss_pred hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 733 NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
.....+..++.++.+++.+|++.+|++||++.|+++.|+
T Consensus 224 ------~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~l~~~l~ 262 (262)
T cd00192 224 ------YRLPKPEYCPDELYELMLSCWQLDPEDRPTFSELVERLE 262 (262)
T ss_pred ------CCCCCCccCChHHHHHHHHHccCCcccCcCHHHHHHhhC
Confidence 000112234577889999999999999999999998863
No 185
>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k
Probab=100.00 E-value=2.3e-36 Score=310.32 Aligned_cols=248 Identities=31% Similarity=0.513 Sum_probs=200.5
Q ss_pred cccCCCcceEEEEEEecCCcEEEEEEeehhhh-HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCHH
Q 003855 507 NLLGTGSFGSVYKGTISDGTDVAIKIFNLQLE-RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSLE 585 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~ 585 (791)
++||+|+||.||+|...+++.||+|.+..... ...+.+.+|++++++++||||+++++++.+....++||||+++++|.
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~~~~l~ 80 (251)
T cd05041 1 EKIGKGNFGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVCVQKQPIYIVMELVPGGSLL 80 (251)
T ss_pred CccccCCCceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEEecCCCeEEEEEcCCCCcHH
Confidence 46999999999999987799999998875543 35568899999999999999999999999999999999999999999
Q ss_pred HHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeeccc
Q 003855 586 KWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTM 665 (791)
Q Consensus 586 ~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~ 665 (791)
+++......+++..+..++.+++.|++||| +.+++||||+|+||+++.++.+||+|||++................
T Consensus 81 ~~l~~~~~~~~~~~~~~~~~~~~~~l~~lH----~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~ 156 (251)
T cd05041 81 TFLRKKKNRLTVKKLLQMSLDAAAGMEYLE----SKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQ 156 (251)
T ss_pred HHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCc
Confidence 999876556889999999999999999999 6789999999999999999999999999998654322111112223
Q ss_pred ccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHH
Q 003855 666 ATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAK 744 (791)
Q Consensus 666 g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 744 (791)
.+..|+|||...++.++.++|||||||++|||+| |..||...... .....+..... .+.+
T Consensus 157 ~~~~y~~PE~~~~~~~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~--~~~~~~~~~~~-----------------~~~~ 217 (251)
T cd05041 157 IPIKWTAPEALNYGRYTSESDVWSYGILLWETFSLGDTPYPGMSNQ--QTRERIESGYR-----------------MPAP 217 (251)
T ss_pred ceeccCChHhhccCCCCcchhHHHHHHHHHHHHhccCCCCccCCHH--HHHHHHhcCCC-----------------CCCC
Confidence 4567999999888899999999999999999999 78888653221 11111111000 0111
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 745 MDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 745 ~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
..++.++.+++.+|++.+|++||++.|+++.|.
T Consensus 218 ~~~~~~~~~li~~~l~~~p~~Rp~~~ell~~l~ 250 (251)
T cd05041 218 QLCPEEIYRLMLQCWAYDPENRPSFSEIYNELQ 250 (251)
T ss_pred ccCCHHHHHHHHHHhccChhhCcCHHHHHHHhh
Confidence 234567889999999999999999999999875
No 186
>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta. Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I
Probab=100.00 E-value=1.2e-36 Score=322.79 Aligned_cols=240 Identities=23% Similarity=0.297 Sum_probs=191.0
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.+ +|+.||+|++.... ....+....|..++... +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~E~~~~ 80 (316)
T cd05620 1 KVLGKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTFQTKEHLFFVMEFLNG 80 (316)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEEEeCCEEEEEECCCCC
Confidence 46999999999999975 68899999997653 23345566777887765 899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~i~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~--~~~ 153 (316)
T cd05620 81 GDLMFHIQDKG-RFDLYRATFYAAEIVCGLQFLH----SKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGD--NRA 153 (316)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCC--Cce
Confidence 99999997654 3789999999999999999999 6789999999999999999999999999987532211 122
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+.+....+ .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~el~~g~~Pf~~~~~--~~~~~~~~~~~~----------------~- 214 (316)
T cd05620 154 STFCGTPDYIAPEILQGLKYTFSVDWWSFGVLLYEMLIGQSPFHGDDE--DELFESIRVDTP----------------H- 214 (316)
T ss_pred eccCCCcCccCHHHHcCCCCCcccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHhCCC----------------C-
Confidence 335689999999999999999999999999999999999999975321 111111111000 0
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHH-HHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVT-DAA 773 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~-ev~ 773 (791)
.+..++.++.+++.+|++.||++||++. ++.
T Consensus 215 -~~~~~~~~~~~li~~~l~~dP~~R~~~~~~~~ 246 (316)
T cd05620 215 -YPRWITKESKDILEKLFERDPTRRLGVVGNIR 246 (316)
T ss_pred -CCCCCCHHHHHHHHHHccCCHHHcCCChHHHH
Confidence 0012345677999999999999999985 454
No 187
>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase. Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down
Probab=100.00 E-value=3.2e-36 Score=318.71 Aligned_cols=264 Identities=22% Similarity=0.286 Sum_probs=203.8
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|++.+.||+|+||.||++... ++..||+|.+.... ......+.+|++++++++||||+++++++.+++..++||||
T Consensus 1 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~ey 80 (308)
T cd06615 1 DDFEKLGELGAGNGGVVTKVLHRPSGLIMARKLIHLEIKPAIRNQIIRELKVLHECNSPYIVGFYGAFYSDGEISICMEH 80 (308)
T ss_pred CCceEEeeccCCCCeEEEEEEEcCCCeEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeeCCEEEEEeec
Confidence 46889999999999999999865 68889999886543 33445688899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++++|.+++.... .+++..+..++.|+++||.|||+ ..+++||||||+||++++++.+||+|||++.......
T Consensus 81 ~~~~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH~---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~-- 154 (308)
T cd06615 81 MDGGSLDQVLKKAG-RIPENILGKISIAVLRGLTYLRE---KHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSM-- 154 (308)
T ss_pred cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHh---hCCEEECCCChHHEEEecCCcEEEccCCCcccccccc--
Confidence 99999999998654 47899999999999999999993 2479999999999999999999999999987653321
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCCh------------
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGL------------ 726 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~------------ 726 (791)
.....++..|+|||...+..++.++|||||||++|||++|+.||.... ......+.........
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~p~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (308)
T cd06615 155 --ANSFVGTRSYMSPERLQGTHYTVQSDIWSLGLSLVEMAIGRYPIPPPD--AKELEAMFGRPVSEGEAKESHRPVSGHP 230 (308)
T ss_pred --cccCCCCcCccChhHhcCCCCCccchHHHHHHHHHHHHhCCCCCCCcc--hhhHHHhhcCccccccccCCcccccCCC
Confidence 123467899999999888889999999999999999999999986432 1122222211110000
Q ss_pred ---------hhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 727 ---------TEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 727 ---------~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.+..+.......... ....++.++.+++.+|++.+|++||++.|+++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 287 (308)
T cd06615 231 PDSPRPMAIFELLDYIVNEPPPKL-PSGAFSDEFQDFVDKCLKKNPKERADLKELTKH 287 (308)
T ss_pred CCccchhhHHHHHHHHhcCCCccC-cCcccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 000000000000000 011245678899999999999999999999876
No 188
>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase. Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate
Probab=100.00 E-value=4e-37 Score=327.19 Aligned_cols=238 Identities=27% Similarity=0.308 Sum_probs=192.2
Q ss_pred cccCCCcceEEEEEEe----cCCcEEEEEEeehhhh--HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 507 NLLGTGSFGSVYKGTI----SDGTDVAIKIFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
+.||+|+||.||+++. .+|+.||+|++..... .....+..|++++++++||||+++++++.+.+..++||||++
T Consensus 2 ~~lg~G~~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~lv~e~~~ 81 (318)
T cd05582 2 KVLGQGSFGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAFQTEGKLYLILDFLR 81 (318)
T ss_pred ceeeeCCCEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEEEcCCEEEEEEcCCC
Confidence 5799999999999874 3688999999976532 234456789999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+|+|.+++.... .+++..+..++.||+.||+||| +.+|+||||||+||++++++.+||+|||+++....... .
T Consensus 82 ~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~--~ 154 (318)
T cd05582 82 GGDLFTRLSKEV-MFTEEDVKFYLAELALALDHLH----SLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEK--K 154 (318)
T ss_pred CCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCC--c
Confidence 999999997654 4899999999999999999999 67899999999999999999999999999986543221 2
Q ss_pred eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHh
Q 003855 661 QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQA 740 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 740 (791)
.....|++.|+|||.+.+..++.++|||||||++|||++|+.||...... ...........
T Consensus 155 ~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~il~el~tg~~p~~~~~~~-----~~~~~i~~~~~-------------- 215 (318)
T cd05582 155 AYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGSLPFQGKDRK-----ETMTMILKAKL-------------- 215 (318)
T ss_pred eecccCChhhcCHHHHcCCCCCCccceeccceEeeeeccCCCCCCCCCHH-----HHHHHHHcCCC--------------
Confidence 22346899999999998888999999999999999999999999753211 11111100000
Q ss_pred hHHHHHHHHHHHHHHhhccccCCCCCCCHHH
Q 003855 741 FSAKMDCILSIMDLALDCCIESPDMRINVTD 771 (791)
Q Consensus 741 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~e 771 (791)
..+..++..+.+++.+||+.||++||++.+
T Consensus 216 -~~p~~~~~~~~~li~~~l~~~P~~R~~a~~ 245 (318)
T cd05582 216 -GMPQFLSPEAQSLLRALFKRNPANRLGAGP 245 (318)
T ss_pred -CCCCCCCHHHHHHHHHHhhcCHhHcCCCCC
Confidence 001123456789999999999999999554
No 189
>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr
Probab=100.00 E-value=6.9e-37 Score=326.02 Aligned_cols=237 Identities=27% Similarity=0.308 Sum_probs=187.7
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHH-HHHhccCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECE-VLRNVRHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. +|+.||+|++.... ......+..|.. +++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (323)
T cd05575 1 KVIGKGSFGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTADKLYFVLDYVNG 80 (323)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEEEeCCEEEEEEcCCCC
Confidence 36999999999999975 78999999987543 122234444444 56788999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~ 153 (323)
T cd05575 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH----SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHS--KTT 153 (323)
T ss_pred CCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCC--Ccc
Confidence 99999998654 4888999999999999999999 6789999999999999999999999999987542221 122
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....||+.|+|||++.+..++.++|||||||++|||++|+.||..... .+..........
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~~~-----~~~~~~i~~~~~--------------- 213 (323)
T cd05575 154 STFCGTPEYLAPEVLRKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRDT-----AEMYDNILNKPL--------------- 213 (323)
T ss_pred ccccCChhhcChhhhcCCCCCccccccccchhhhhhhcCCCCCCCCCH-----HHHHHHHHcCCC---------------
Confidence 334689999999999999999999999999999999999999975321 111111111100
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVT 770 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~ 770 (791)
......+..+.+++.+|++.||++||++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (323)
T cd05575 214 RLKPNISVSARHLLEGLLQKDRTKRLGAK 242 (323)
T ss_pred CCCCCCCHHHHHHHHHHhhcCHHhCCCCC
Confidence 00112345678999999999999999985
No 190
>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron. Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca
Probab=100.00 E-value=2.3e-36 Score=312.42 Aligned_cols=251 Identities=25% Similarity=0.439 Sum_probs=194.8
Q ss_pred cccCCCcceEEEEEEec----CCcEEEEEEeehh-hhHHHHHHHHHHHHHHhccCCccceeeeeec-cCCeeeEEEecCC
Q 003855 507 NLLGTGSFGSVYKGTIS----DGTDVAIKIFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSCS-NPDFKALVLEFMP 580 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-~~~~~~lv~e~~~ 580 (791)
+.||+|+||.||+|... ++..||+|.+... .....+.+..|+.+++.++||||+++++++. .++..++|+||++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~lv~e~~~ 80 (262)
T cd05058 1 RVIGKGHFGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICLPSEGSPLVVLPYMK 80 (262)
T ss_pred CcccccCCceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEeecCCCCcEEEEecCC
Confidence 46899999999999853 2457999987543 2344567888999999999999999999775 4556789999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc--
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS-- 658 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~-- 658 (791)
+|+|.+++.......++..+..++.|++.|++||| ..+++||||||+||++++++.+||+|||+++........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~ 156 (262)
T cd05058 81 HGDLRNFIRSETHNPTVKDLIGFGLQVAKGMEYLA----SKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSV 156 (262)
T ss_pred CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCccccccCcceEEEcCCCcEEECCccccccccCCcceee
Confidence 99999999876555788888999999999999999 678999999999999999999999999999765432211
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhC-CCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
.......++..|+|||+..+..++.++|||||||++|||++| ..||..... .....++.. ..
T Consensus 157 ~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~el~~~~~~~~~~~~~--~~~~~~~~~---~~------------ 219 (262)
T cd05058 157 HNHTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVDS--FDITVYLLQ---GR------------ 219 (262)
T ss_pred cccccCcCCccccChhHhccCccchHHHHHHHHHHHHHHHcCCCCCCCCCCH--HHHHHHHhc---CC------------
Confidence 111123456789999999888899999999999999999995 555653211 111111110 00
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
....+..++..+.+++.+||+.+|++||++.|+++.|+++.
T Consensus 220 --~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~il~~l~~~~ 260 (262)
T cd05058 220 --RLLQPEYCPDPLYEVMLSCWHPKPEMRPTFSELVSRIEQIF 260 (262)
T ss_pred --CCCCCCcCCHHHHHHHHHHcCCChhhCCCHHHHHHHHHHHh
Confidence 00011123466889999999999999999999999999875
No 191
>KOG4279 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-37 Score=323.53 Aligned_cols=244 Identities=26% Similarity=0.361 Sum_probs=201.2
Q ss_pred ccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCHHH
Q 003855 508 LLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSLEK 586 (791)
Q Consensus 508 ~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 586 (791)
++|+|+||+||.|+.. +...+|||-+.....+..+.+.+|+.+-++++|.|||+.+|.+.+.+..-+.||-++||+|.+
T Consensus 582 VLGKGTYG~VYA~RD~~tqvrIaIKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~senGf~kIFMEqVPGGSLSs 661 (1226)
T KOG4279|consen 582 VLGKGTYGTVYAARDMDTQVRIAIKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSVSENGFFKIFMEQVPGGSLSS 661 (1226)
T ss_pred EeecCceeEEEeeccccceeEEEeeecccccchhhccHHHHHHHHHHHhhHhHHHHhhccCCCCeEEEEeecCCCCcHHH
Confidence 6999999999999965 566799999987777777889999999999999999999999999999999999999999999
Q ss_pred HHhhCCCCC--CHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC-CCCcEEEeeeccccccCCCCCcceeec
Q 003855 587 WLYSHNYFL--DILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD-ENMAAHVSDFGISKLLGEGEDSVTQTM 663 (791)
Q Consensus 587 ~l~~~~~~~--~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfgla~~~~~~~~~~~~~~ 663 (791)
.+++.=.++ .+.++-.+.+||++||.||| ...|||||||-+|||++ -.|.+||+|||.++.+..- ......
T Consensus 662 LLrskWGPlKDNEstm~fYtkQILeGLkYLH----en~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAgi--nP~TET 735 (1226)
T KOG4279|consen 662 LLRSKWGPLKDNESTMNFYTKQILEGLKYLH----ENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGI--NPCTET 735 (1226)
T ss_pred HHHhccCCCccchhHHHHHHHHHHHHhhhhh----hcceeeccccCCcEEEeeccceEEecccccchhhccC--Cccccc
Confidence 999764445 67788888999999999999 56799999999999996 6899999999999876321 222333
Q ss_pred ccccccccCCCccCCC--CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 664 TMATIGYMAPEYGSEG--IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 664 ~~g~~~y~aPE~~~~~--~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
..||..|||||++..+ .|..++|||||||++.||.||++||-+.......+.+. ++.. ...
T Consensus 736 FTGTLQYMAPEvIDqG~RGYG~aADIWS~GCT~vEMATGrPPF~ElgspqAAMFkV-------GmyK----------vHP 798 (1226)
T KOG4279|consen 736 FTGTLQYMAPEVIDQGPRGYGKAADIWSFGCTMVEMATGRPPFVELGSPQAAMFKV-------GMYK----------VHP 798 (1226)
T ss_pred cccchhhhChHhhccCCcCCCchhhhhhccceeEeeccCCCCeeecCChhHhhhhh-------ccee----------cCC
Confidence 5699999999998765 48889999999999999999999998765543322221 1111 011
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+-+.+.+.+...+|.+|+.+||.+||+++++++
T Consensus 799 ~iPeelsaeak~FilrcFepd~~~R~sA~~LL~ 831 (1226)
T KOG4279|consen 799 PIPEELSAEAKNFILRCFEPDPCDRPSAKDLLQ 831 (1226)
T ss_pred CCcHHHHHHHHHHHHHHcCCCcccCccHHHhcc
Confidence 223456677889999999999999999999875
No 192
>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase. Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription
Probab=100.00 E-value=2.8e-36 Score=327.82 Aligned_cols=265 Identities=25% Similarity=0.316 Sum_probs=198.4
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCC-----eee
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPD-----FKA 573 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 573 (791)
+|+..+.||+|+||.||+|... +++.||||++.... ....+.+.+|+++++.++||||+++++++..++ ..+
T Consensus 1 ~~~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~~ 80 (372)
T cd07853 1 DVEPDRPIGYGAFGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPPHIDPFEEIY 80 (372)
T ss_pred CCcccceeeeCCCEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCCCccccceEE
Confidence 4788899999999999999964 78999999886432 234467888999999999999999999998776 789
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
+|+||+. ++|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+|+...
T Consensus 81 lv~e~~~-~~l~~~~~~~~-~l~~~~~~~~~~qi~~aL~~LH----~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~ 154 (372)
T cd07853 81 VVTELMQ-SDLHKIIVSPQ-PLSSDHVKVFLYQILRGLKYLH----SAGILHRDIKPGNLLVNSNCVLKICDFGLARVEE 154 (372)
T ss_pred EEeeccc-cCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCChHHEEECCCCCEEeccccceeecc
Confidence 9999996 58888886544 4899999999999999999999 6789999999999999999999999999998654
Q ss_pred CCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC-hhhhc-
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG-LTEVV- 730 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~~- 730 (791)
.... .......++..|+|||++.+ ..++.++||||+||++|||++|+.||...... .....+....... ..+..
T Consensus 155 ~~~~-~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~~~g~~~~~~~~~ 231 (372)
T cd07853 155 PDES-KHMTQEVVTQYYRAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPI--QQLDLITDLLGTPSLEAMRS 231 (372)
T ss_pred cCcc-ccCCCCCcCCCcCCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHH--HHHHHHHHHcCCCCHHHHHH
Confidence 3221 22233467899999998766 45899999999999999999999999753221 1111111111110 00000
Q ss_pred -----chhhhhhH-------HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 731 -----DANLVREE-------QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 731 -----d~~~~~~~-------~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
...+.... .........+.++.+++.+|++.||++|||+.|+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 288 (372)
T cd07853 232 ACEGARAHILRGPHKPPSLPVLYTLSSQATHEAVHLLCRMLVFDPDKRISAADALAH 288 (372)
T ss_pred hhHHHHHHHHhCCCCCCchHHhcccCCCCCHHHHHHHHHhCCCChhhCcCHHHHhcC
Confidence 00000000 0000011235678899999999999999999999863
No 193
>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2. Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit
Probab=100.00 E-value=2.8e-36 Score=317.56 Aligned_cols=261 Identities=24% Similarity=0.366 Sum_probs=201.6
Q ss_pred hccccccccCCCcceEEEEEEec-----------------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCcccee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-----------------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKI 562 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-----------------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l 562 (791)
++|++.+.||+|+||.||++... ++..||+|++.... ......+..|+.+++.++||||+++
T Consensus 5 ~~~~~~~~lg~G~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~~ 84 (296)
T cd05095 5 KRLTFKEKLGEGQFGEVHLCEAEGMEKFMDKDFSLDVSGNQPVLVAVKMLREDANKNARNDFLKEIKIMSRLKDPNIIRL 84 (296)
T ss_pred hhceeeeeccCCCCCeEEecccccccccccccccccCCCCceeEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceE
Confidence 56899999999999999998532 23468999987543 3345678899999999999999999
Q ss_pred eeeeccCCeeeEEEecCCCCCHHHHHhhCC----------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCC
Q 003855 563 LSSCSNPDFKALVLEFMPNGSLEKWLYSHN----------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTN 632 (791)
Q Consensus 563 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~N 632 (791)
++++...+..++||||+++|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+|
T Consensus 85 ~~~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dlkp~N 160 (296)
T cd05095 85 LAVCITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTLIFMATQIASGMKYLS----SLNFVHRDLATRN 160 (296)
T ss_pred EEEEecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHHHHHHHHHHHHHHHHH----HCCeecccCChhe
Confidence 999999999999999999999999997532 23677889999999999999999 6789999999999
Q ss_pred eEeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh--CCCCCCccccC
Q 003855 633 ILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT--RKRPTDEMFTG 710 (791)
Q Consensus 633 ill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt--g~~p~~~~~~~ 710 (791)
|++++++.++++|||+++.+.............++..|+|||....+.++.++|||||||++|||++ |..||......
T Consensus 161 ili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~ 240 (296)
T cd05095 161 CLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRWMSWESILLGKFTTASDVWAFGVTLWEILTLCKEQPYSQLSDE 240 (296)
T ss_pred EEEcCCCCEEeccCcccccccCCcceeccCcCcCccccCCHHHHhcCCccchhhhhHHHHHHHHHHHhCCCCCccccChH
Confidence 9999999999999999986644332222222345678999998888889999999999999999998 66787543221
Q ss_pred cchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 711 EMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 711 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
+ ............... ...+.+..++..+.+++.+||+.||++||++.||++.|+
T Consensus 241 ~--~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~li~~cl~~~p~~Rp~~~~i~~~l~ 295 (296)
T cd05095 241 Q--VIENTGEFFRDQGRQ----------VYLPKPALCPDSLYKLMLSCWRRNAKERPSFQEIHATLL 295 (296)
T ss_pred H--HHHHHHHHHhhcccc----------ccCCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 1 100000000000000 000111235577889999999999999999999999886
No 194
>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase. Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.
Probab=100.00 E-value=3.3e-36 Score=316.43 Aligned_cols=251 Identities=25% Similarity=0.324 Sum_probs=202.5
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
+.|++.+.||+|+||.||+|+.. +++.||+|++........+.+.+|+.+++.++||||+++++++..+...++||||+
T Consensus 12 ~~y~i~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 91 (292)
T cd06644 12 EVWEIIGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAFYWDGKLWIMIEFC 91 (292)
T ss_pred hhhhhhheecCCCCeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEEEeCCeEEEEEecC
Confidence 56889999999999999999975 58999999987766666778899999999999999999999999889999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
++++|..++.+....+++..+..++.|++.|+.||| +.+++||||||+||+++.++.++|+|||++....... .
T Consensus 92 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~--~ 165 (292)
T cd06644 92 PGGAVDAIMLELDRGLTEPQIQVICRQMLEALQYLH----SMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTL--Q 165 (292)
T ss_pred CCCcHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh----cCCeeecCCCcceEEEcCCCCEEEccCccceeccccc--c
Confidence 999999988766666899999999999999999999 6789999999999999999999999999987543221 1
Q ss_pred eeecccccccccCCCccC-----CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 660 TQTMTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
......++..|+|||++. ...++.++|||||||++|||++|+.||..... ......+... ....
T Consensus 166 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~-~~~~~~~~~~----~~~~------ 234 (292)
T cd06644 166 RRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNP-MRVLLKIAKS----EPPT------ 234 (292)
T ss_pred ccceecCCccccCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccH-HHHHHHHhcC----CCcc------
Confidence 122345788999999874 45578899999999999999999999865321 1111111100 0000
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...+..++.++.+++.+||+.+|++||++.|+++
T Consensus 235 ------~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 268 (292)
T cd06644 235 ------LSQPSKWSMEFRDFLKTALDKHPETRPSAAQLLE 268 (292)
T ss_pred ------CCCCcccCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 0011134456789999999999999999999976
No 195
>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1. Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an
Probab=100.00 E-value=6.7e-37 Score=331.27 Aligned_cols=259 Identities=20% Similarity=0.275 Sum_probs=201.4
Q ss_pred hHHHHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccC
Q 003855 494 LDIQRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP 569 (791)
Q Consensus 494 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 569 (791)
.+++...++|++.+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+.+++.++||||+++++++.++
T Consensus 36 ~~~~~~~~~y~i~~~lG~G~fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~~~~ 115 (371)
T cd05622 36 RDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDD 115 (371)
T ss_pred hhcCcchhhcEEEEEEeecCCeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEEEcC
Confidence 344555689999999999999999999975 68899999986532 23345678899999999999999999999999
Q ss_pred CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
...++||||+++|+|.+++.... ++...+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||+|
T Consensus 116 ~~~~lv~Ey~~gg~L~~~~~~~~--~~~~~~~~~~~qi~~aL~~LH----~~~ivHrDLkp~NIll~~~~~ikL~DfG~a 189 (371)
T cd05622 116 RYLYMVMEYMPGGDLVNLMSNYD--VPEKWARFYTAEVVLALDAIH----SMGFIHRDVKPDNMLLDKSGHLKLADFGTC 189 (371)
T ss_pred CEEEEEEcCCCCCcHHHHHHhcC--CCHHHHHHHHHHHHHHHHHHH----HCCEEeCCCCHHHEEECCCCCEEEEeCCce
Confidence 99999999999999999997643 788888999999999999999 789999999999999999999999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCCC----CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSEG----IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG 725 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (791)
+....... ......+||+.|+|||++... .++.++|||||||++|||++|+.||..... ...+...... ..
T Consensus 190 ~~~~~~~~-~~~~~~~gt~~y~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~-~~~~~~i~~~---~~ 264 (371)
T cd05622 190 MKMNKEGM-VRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSL-VGTYSKIMNH---KN 264 (371)
T ss_pred eEcCcCCc-ccccCcccCccccCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCH-HHHHHHHHcC---CC
Confidence 87643322 122345699999999987643 378999999999999999999999975211 1111111100 00
Q ss_pred hhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 003855 726 LTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDM--RINVTDAAAK 775 (791)
Q Consensus 726 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPt~~ev~~~ 775 (791)
. ...+....++..+.+++..|+...|.+ ||++.|+++.
T Consensus 265 ~------------~~~~~~~~~s~~~~~li~~~L~~~~~r~~r~~~~ei~~h 304 (371)
T cd05622 265 S------------LTFPDDNDISKEAKNLICAFLTDREVRLGRNGVEEIKRH 304 (371)
T ss_pred c------------ccCCCcCCCCHHHHHHHHHHcCChhhhcCCCCHHHHhcC
Confidence 0 001111234566789999999844433 7789888874
No 196
>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt
Probab=100.00 E-value=2.2e-36 Score=314.32 Aligned_cols=238 Identities=21% Similarity=0.309 Sum_probs=189.2
Q ss_pred ccCCCcceEEEEEEecC-------------------------CcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCcccee
Q 003855 508 LLGTGSFGSVYKGTISD-------------------------GTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKI 562 (791)
Q Consensus 508 ~ig~G~~g~Vy~~~~~~-------------------------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l 562 (791)
.||+|+||.||+|.... ...||+|++..........+.+|+.++++++||||+++
T Consensus 2 ~lG~G~~~~vy~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~~~~~~~~l~h~niv~~ 81 (274)
T cd05076 2 HLGQGTRTNIYDGRLRVEGGGEPEEDEMEDEDPLVEGNNNGRELRVVLKVLDPSHRDIALAFFETASLMSQVSHIHLAFV 81 (274)
T ss_pred CcCcccccceecceeEeccCCCCcccccccccccccccCCCeeeeEEEEecChHHHHHHHHHHHHHHHHhcCCCCCeeeE
Confidence 69999999999997421 23589999876655556678889999999999999999
Q ss_pred eeeeccCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC---
Q 003855 563 LSSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM--- 639 (791)
Q Consensus 563 ~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~--- 639 (791)
++++.+....++||||+++|+|..++......+++..+.+++.|+++||+||| +.+|+||||||+||++++.+
T Consensus 82 ~~~~~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~iiH~dlkp~Nill~~~~~~~ 157 (274)
T cd05076 82 HGVCVRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVAQQLASALSYLE----DKNLVHGNVCAKNILLARLGLAE 157 (274)
T ss_pred EEEEEeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----cCCccCCCCCcccEEEeccCccc
Confidence 99999999999999999999999999876666899999999999999999999 67899999999999997644
Q ss_pred ----cEEEeeeccccccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHH-hCCCCCCccccCcch
Q 003855 640 ----AAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETF-TRKRPTDEMFTGEMS 713 (791)
Q Consensus 640 ----~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~ell-tg~~p~~~~~~~~~~ 713 (791)
.+|++|||.+...... ....++..|+|||.+.+ ..++.++|||||||++||++ +|+.||......+
T Consensus 158 ~~~~~~kl~d~g~~~~~~~~------~~~~~~~~~~aPe~~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~-- 229 (274)
T cd05076 158 GTSPFIKLSDPGVSFTALSR------EERVERIPWIAPECVPGGNSLSTAADKWSFGTTLLEICFDGEVPLKERTPSE-- 229 (274)
T ss_pred CccceeeecCCccccccccc------cccccCCcccCchhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCccccChHH--
Confidence 4899999998654221 12346788999998765 56899999999999999995 6898987532211
Q ss_pred HHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 714 LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
...+..... ..+ ......+.+++.+||+.+|++||+|.++++.|
T Consensus 230 ~~~~~~~~~-----------------~~~--~~~~~~~~~li~~cl~~~p~~Rps~~~il~~L 273 (274)
T cd05076 230 KERFYEKKH-----------------RLP--EPSCKELATLISQCLTYEPTQRPSFRTILRDL 273 (274)
T ss_pred HHHHHHhcc-----------------CCC--CCCChHHHHHHHHHcccChhhCcCHHHHHHhh
Confidence 111111100 000 01124578999999999999999999999876
No 197
>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes. Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an
Probab=100.00 E-value=2.4e-36 Score=311.89 Aligned_cols=252 Identities=27% Similarity=0.446 Sum_probs=201.9
Q ss_pred hccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
++|++.+.||+|+||.||+|....+..||+|.+.... ...+.+.+|++++++++|||++++++++. ....++||||++
T Consensus 6 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~lK~~~~~~-~~~~~~~~E~~~l~~l~h~~i~~~~~~~~-~~~~~~v~e~~~ 83 (260)
T cd05069 6 ESLRLDVKLGQGCFGEVWMGTWNGTTKVAIKTLKPGT-MMPEAFLQEAQIMKKLRHDKLVPLYAVVS-EEPIYIVTEFMG 83 (260)
T ss_pred HHeeeeeeecCcCCCeEEEEEEcCCceEEEEEcccCC-ccHHHHHHHHHHHHhCCCCCeeeEEEEEc-CCCcEEEEEcCC
Confidence 5688889999999999999998777789999876432 23456888999999999999999999885 456789999999
Q ss_pred CCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 581 NGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 581 ~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
+|+|.+++... ...+++..+..++.|++.||+||| +.+++||||||+||++++++.++|+|||+++........
T Consensus 84 ~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lH----~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~- 158 (260)
T cd05069 84 KGSLLDFLKEGDGKYLKLPQLVDMAAQIADGMAYIE----RMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYT- 158 (260)
T ss_pred CCCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccCcceEEEcCCCeEEECCCccceEccCCccc-
Confidence 99999999854 345789999999999999999999 678999999999999999999999999999876433211
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
......++..|+|||+..+..++.++||||||+++|||+| |+.||.+....+ ...++......
T Consensus 159 ~~~~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~--~~~~~~~~~~~-------------- 222 (260)
T cd05069 159 ARQGAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMVNRE--VLEQVERGYRM-------------- 222 (260)
T ss_pred ccCCCccchhhCCHHHhccCCcChHHHHHHHHHHHHHHHhCCCCCCCCCCHHH--HHHHHHcCCCC--------------
Confidence 1122345678999999988889999999999999999999 899987532211 11111110000
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
+.+...+..+.+++.+||+.+|++||++.++.+.|+.
T Consensus 223 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~~ 259 (260)
T cd05069 223 ---PCPQGCPESLHELMKLCWKKDPDERPTFEYIQSFLED 259 (260)
T ss_pred ---CCCcccCHHHHHHHHHHccCCcccCcCHHHHHHHHhc
Confidence 0111345678899999999999999999999999875
No 198
>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase. Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re
Probab=100.00 E-value=4.5e-36 Score=309.09 Aligned_cols=249 Identities=28% Similarity=0.422 Sum_probs=200.3
Q ss_pred hhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeee-ccCCeeeEEEec
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSC-SNPDFKALVLEF 578 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~-~~~~~~~lv~e~ 578 (791)
.++|++.+.||+|+||.||+|.. .|..||+|.+.... ..+.+..|+.++++++|+|++++++++ .+.+..++||||
T Consensus 5 ~~~~~~~~~lg~g~~~~v~~~~~-~~~~~~~k~~~~~~--~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e~ 81 (256)
T cd05082 5 MKELKLLQTIGKGEFGDVMLGDY-RGNKVAVKCIKNDA--TAQAFLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEY 81 (256)
T ss_pred HHhCeeeeeecccCCCeEEEEEE-cCCcEEEEEeCCCc--hHHHHHHHHHHHHhCCCCCeeeEEEEEEcCCCceEEEEEC
Confidence 35788999999999999999987 47889999886443 245788999999999999999999975 455678999999
Q ss_pred CCCCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+++|+|.+++.+... .+++..+..++.|++.||+||| ..+++||||||+||++++++.+|++|||+++......
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~- 156 (256)
T cd05082 82 MAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLE----ANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ- 156 (256)
T ss_pred CCCCcHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeccccchheEEEcCCCcEEecCCccceeccccC-
Confidence 999999999986543 4889999999999999999999 6789999999999999999999999999987643322
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
....++..|+|||+..+..++.++|||||||++|||++ |+.||..... ......+......
T Consensus 157 ----~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~~l~~~g~~p~~~~~~--~~~~~~~~~~~~~------------ 218 (256)
T cd05082 157 ----DTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPL--KDVVPRVEKGYKM------------ 218 (256)
T ss_pred ----CCCccceeecCHHHHccCCCCchhhhHHHHHHHHHHHhCCCCCCCCCCH--HHHHHHHhcCCCC------------
Confidence 12234568999999988889999999999999999998 9999864211 1111111110000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
.....++..+.+++.+|++.+|++|||+.++++.|+++
T Consensus 219 -----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~l~~~l~~~ 256 (256)
T cd05082 219 -----DAPDGCPPVVYDVMKQCWHLDAATRPSFLQLREQLEHI 256 (256)
T ss_pred -----CCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHhcC
Confidence 01123456788999999999999999999999998764
No 199
>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi
Probab=100.00 E-value=3e-36 Score=310.62 Aligned_cols=248 Identities=28% Similarity=0.463 Sum_probs=198.5
Q ss_pred cccCCCcceEEEEEEec-C---CcEEEEEEeehhhh-HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-D---GTDVAIKIFNLQLE-RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~---~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|++. . +..||+|.+..... ...+.+..|+.++++++||||+++++++. .+..++||||+++
T Consensus 1 ~~ig~G~~g~v~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-~~~~~~v~e~~~~ 79 (257)
T cd05060 1 KELGHGNFGSVVKGVYLMKSGKEVEVAVKTLKQEHIAAGKKEFLREASVMAQLDHPCIVRLIGVCK-GEPLMLVMELAPL 79 (257)
T ss_pred CccCccCceeEEEeEeeccCCCcceEEEEecccccchHHHHHHHHHHHHHHhcCCCCeeeEEEEEc-CCceEEEEEeCCC
Confidence 47999999999999853 2 36899999875543 34567889999999999999999999876 4567999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce-
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT- 660 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~- 660 (791)
|+|.+++.... .+++..+..++.|++.|++||| ..+++||||||+||+++.++.+||+|||+++..........
T Consensus 80 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lh----~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~ 154 (257)
T cd05060 80 GPLLKYLKKRR-EIPVSDLKELAHQVAMGMAYLE----SKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRA 154 (257)
T ss_pred CcHHHHHHhCC-CCCHHHHHHHHHHHHHHHHHHh----hcCeeccCcccceEEEcCCCcEEeccccccceeecCCccccc
Confidence 99999998665 5899999999999999999999 67899999999999999999999999999987654332211
Q ss_pred eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 661 QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
.....++..|+|||...+..++.++|||||||++|||++ |..||..... .....++....+
T Consensus 155 ~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~~l~~~~~~g~~p~~~~~~--~~~~~~~~~~~~---------------- 216 (257)
T cd05060 155 TTAGRWPLKWYAPECINYGKFSSKSDVWSYGVTLWEAFSYGAKPYGEMKG--AEVIAMLESGER---------------- 216 (257)
T ss_pred ccCccccccccCHHHhcCCCCCccchHHHHHHHHHHHHcCCCCCcccCCH--HHHHHHHHcCCc----------------
Confidence 111223567999999988899999999999999999998 9999875322 222222221110
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
.+.+..++..+.+++.+||+.+|++||++.++++.|+++
T Consensus 217 -~~~~~~~~~~l~~li~~cl~~~p~~Rp~~~~l~~~l~~~ 255 (257)
T cd05060 217 -LPRPEECPQEIYSIMLSCWKYRPEDRPTFSELESTFRRD 255 (257)
T ss_pred -CCCCCCCCHHHHHHHHHHhcCChhhCcCHHHHHHHHHhc
Confidence 011123456788999999999999999999999999875
No 200
>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3. Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to
Probab=100.00 E-value=2.9e-36 Score=322.97 Aligned_cols=260 Identities=23% Similarity=0.386 Sum_probs=206.1
Q ss_pred hccccccccCCCcceEEEEEEec--------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS--------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPD 570 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~--------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 570 (791)
.+|.+.+.||+|+||.||+|+.. .+..||+|.+.... ....+.+.+|+.+++++ +||||+++++++...+
T Consensus 12 ~~~~i~~~ig~G~~g~v~~~~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~ 91 (334)
T cd05100 12 TRLTLGKPLGEGCFGQVVMAEAIGIDKDKPNKPVTVAVKMLKDDATDKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDG 91 (334)
T ss_pred hHeeecceeccccCCcEEEEEEeccCCccCCcceeEEEEEcccccCHHHHHHHHHHHHHHHhhcCCCCeeeeeEEEccCC
Confidence 46889999999999999999742 12368999887543 34457888999999999 8999999999999989
Q ss_pred eeeEEEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEe
Q 003855 571 FKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILL 635 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill 635 (791)
..++||||+++|+|.+++.... ..+++.++..++.|++.||+||| +.+++||||||+||++
T Consensus 92 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~qi~~al~~LH----~~givH~dlkp~Nill 167 (334)
T cd05100 92 PLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQLTFKDLVSCAYQVARGMEYLA----SQKCIHRDLAARNVLV 167 (334)
T ss_pred ceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccCCHHHHHHHHHHHHHHHHHHH----HCCeeccccccceEEE
Confidence 9999999999999999997532 24788899999999999999999 6799999999999999
Q ss_pred CCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchH
Q 003855 636 DENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSL 714 (791)
Q Consensus 636 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~ 714 (791)
++++.+||+|||+++...............++..|+|||++.+..++.++|||||||++|||++ |..||.... .
T Consensus 168 ~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~el~~~g~~p~~~~~-----~ 242 (334)
T cd05100 168 TEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLLWEIFTLGGSPYPGIP-----V 242 (334)
T ss_pred cCCCcEEECCcccceecccccccccccCCCcCceEcCHHHhccCCcCchhhhHHHHHHHHHHHhcCCCCCCCCC-----H
Confidence 9999999999999987654322222222234567999999998999999999999999999998 888886532 1
Q ss_pred HHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 715 RRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 715 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
..+......... .+.+..++.++.+++.+|++.+|++||++.|+++.|.++....
T Consensus 243 ~~~~~~~~~~~~--------------~~~~~~~~~~l~~li~~cl~~~p~~Rps~~ell~~l~~~~~~~ 297 (334)
T cd05100 243 EELFKLLKEGHR--------------MDKPANCTHELYMIMRECWHAVPSQRPTFKQLVEDLDRVLTVT 297 (334)
T ss_pred HHHHHHHHcCCC--------------CCCCCCCCHHHHHHHHHHcccChhhCcCHHHHHHHHHHHhhhc
Confidence 122111110000 0011134567889999999999999999999999999987543
No 201
>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti
Probab=100.00 E-value=2e-36 Score=316.15 Aligned_cols=252 Identities=25% Similarity=0.354 Sum_probs=204.7
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
++|++.+.||+|+||.||+|... ++..||+|++........+.+..|++++++++||||+++++++..+...++||||+
T Consensus 5 ~~~~i~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 84 (280)
T cd06611 5 DIWEIIGELGDGAFGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAYFYENKLWILIEFC 84 (280)
T ss_pred hHHHHHHHhcCCCCceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEEecCCeEEEEeecc
Confidence 57889999999999999999975 68999999987666666678889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
++++|.+++.+....+++..+..++.|++.|+.||| +.+|+||||+|+||+++.++.++|+|||++........
T Consensus 85 ~~~~L~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~-- 158 (280)
T cd06611 85 DGGALDSIMLELERGLTEPQIRYVCRQMLEALNFLH----SHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQ-- 158 (280)
T ss_pred CCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEECCCCCEEEccCccchhhccccc--
Confidence 999999999876666899999999999999999999 67899999999999999999999999999876533221
Q ss_pred eeecccccccccCCCccC-----CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 660 TQTMTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
......++..|+|||.+. ...++.++||||||+++|||++|+.||...... .....+... ...
T Consensus 159 ~~~~~~~~~~y~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~----~~~------- 226 (280)
T cd06611 159 KRDTFIGTPYWMAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPM-RVLLKILKS----EPP------- 226 (280)
T ss_pred ccceeecchhhcCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHH-HHHHHHhcC----CCC-------
Confidence 222345888999999864 345788999999999999999999998753211 111111100 000
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
....+..++.++.+++.+||+.+|++||++.++++.
T Consensus 227 -----~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~ 262 (280)
T cd06611 227 -----TLDQPSKWSSSFNDFLKSCLVKDPDDRPTAAELLKH 262 (280)
T ss_pred -----CcCCcccCCHHHHHHHHHHhccChhhCcCHHHHhcC
Confidence 000112345667899999999999999999999764
No 202
>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated
Probab=100.00 E-value=3.4e-36 Score=312.14 Aligned_cols=253 Identities=24% Similarity=0.347 Sum_probs=201.3
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
.++|+..+.||+|+||.||+|+.. +++.||+|+++.........+.+|+.+++.++||||+++++++.+.+..++||||
T Consensus 8 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~~~~~~~~lv~e~ 87 (267)
T cd06645 8 QEDFELIQRIGSGTYGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSYLRRDKLWICMEF 87 (267)
T ss_pred HHHHHHHHHhCCCCCeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEEEeCCEEEEEEec
Confidence 357888899999999999999864 6899999998766555556788899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++++|.+++...+ .+++.++..++.|++.|+.||| ..+++|+||||+||+++.++.++|+|||++.......
T Consensus 88 ~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~-- 160 (267)
T cd06645 88 CGGGSLQDIYHVTG-PLSESQIAYVSRETLQGLYYLH----SKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATI-- 160 (267)
T ss_pred cCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcc--
Confidence 99999999987654 4899999999999999999999 6789999999999999999999999999997654321
Q ss_pred ceeecccccccccCCCccC---CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 659 VTQTMTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
.......|+..|+|||++. .+.++.++|||||||++|||++|+.||....+... .......... .. ..
T Consensus 161 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~~~~-~~~~~~~~~~---~~----~~- 231 (267)
T cd06645 161 AKRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHPMRA-LFLMTKSNFQ---PP----KL- 231 (267)
T ss_pred cccccccCcccccChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccchhh-HHhhhccCCC---CC----cc-
Confidence 1223346889999999864 45688999999999999999999999864322111 1010000000 00 00
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.....++..+.+++.+|++.+|++||++.++++
T Consensus 232 ------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~ll~ 264 (267)
T cd06645 232 ------KDKMKWSNSFHHFVKMALTKNPKKRPTAEKLLQ 264 (267)
T ss_pred ------cccCCCCHHHHHHHHHHccCCchhCcCHHHHhc
Confidence 001123456779999999999999999999875
No 203
>KOG0032 consensus Ca2+/calmodulin-dependent protein kinase, EF-Hand protein superfamily [Signal transduction mechanisms]
Probab=100.00 E-value=2.4e-36 Score=319.36 Aligned_cols=251 Identities=24% Similarity=0.314 Sum_probs=210.3
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh---HHHHHHHHHHHHHHhcc-CCccceeeeeeccCCeee
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE---RAFRSFDSECEVLRNVR-HRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~ 573 (791)
..+.|+..+.||+|.||.||+++.+ +|+.+|+|++.+... ...+.+.+|+.+|+++. |||||.+.+++++....+
T Consensus 33 ~~~~Y~l~~~lG~G~Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~e~~~~~~ 112 (382)
T KOG0032|consen 33 IKEKYELGRELGRGQFGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAFEDPDSVY 112 (382)
T ss_pred ccccEEehhhhCCCCceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEEEcCCeEE
Confidence 3467888899999999999999976 599999999976643 24468899999999998 999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC----CcEEEeeeccc
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN----MAAHVSDFGIS 649 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~----~~~kl~Dfgla 649 (791)
+|||++.||.|.+.+... . +++.....++.|++.|+.||| +.+|+|||+||+|+|+... +.+|++|||+|
T Consensus 113 lvmEL~~GGeLfd~i~~~-~-~sE~da~~~~~~il~av~~lH----~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla 186 (382)
T KOG0032|consen 113 LVMELCEGGELFDRIVKK-H-YSERDAAGIIRQILEAVKYLH----SLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLA 186 (382)
T ss_pred EEEEecCCchHHHHHHHc-c-CCHHHHHHHHHHHHHHHHHHH----hCCceeccCCHHHeeeccccCCCCcEEEeeCCCc
Confidence 999999999999999877 3 899999999999999999999 7899999999999999643 57999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhh
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEV 729 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (791)
..... .......+||+.|+|||++....|+..+||||.||++|.|++|.+||.+....+.. ........ +
T Consensus 187 ~~~~~---~~~~~~~~Gtp~y~APEvl~~~~y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~-~~i~~~~~-----~- 256 (382)
T KOG0032|consen 187 KFIKP---GERLHTIVGTPEYVAPEVLGGRPYGDEVDVWSIGVILYILLSGVPPFWGETEFEIF-LAILRGDF-----D- 256 (382)
T ss_pred eEccC---CceEeeecCCccccCchhhcCCCCCcccchhHHHHHHHHHhhCCCCCcCCChhHHH-HHHHcCCC-----C-
Confidence 98765 22344578999999999999999999999999999999999999999874322211 11111100 0
Q ss_pred cchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 730 VDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 730 ~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...+.+..++..+.+++..|+..||..|+|+.++++
T Consensus 257 ---------f~~~~w~~is~~akd~i~~ll~~dp~~R~ta~~~L~ 292 (382)
T KOG0032|consen 257 ---------FTSEPWDDISESAKDFIRKLLEFDPRKRLTAAQALQ 292 (382)
T ss_pred ---------CCCCCccccCHHHHHHHHHhcccCcccCCCHHHHhc
Confidence 011233456677889999999999999999999998
No 204
>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt
Probab=100.00 E-value=1.2e-36 Score=324.48 Aligned_cols=242 Identities=26% Similarity=0.288 Sum_probs=189.0
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHH-HHHHHhccCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSE-CEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e-~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. +++.||+|++.... ......+..| ..+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05602 1 KVIGKGSFGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYING 80 (325)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEEEcCCeEEEEEeCCCC
Confidence 36999999999999975 67889999987543 1222333444 3456788999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++..... +.+..+..++.||++||.||| +.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 81 ~~L~~~~~~~~~-~~~~~~~~~~~qi~~~L~~lH----~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~--~~ 153 (325)
T cd05602 81 GELFYHLQRERC-FLEPRARFYAAEIASALGYLH----SLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNG--TT 153 (325)
T ss_pred CcHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCC--Cc
Confidence 999999986543 778888889999999999999 77999999999999999999999999999975432211 22
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....||+.|+|||++.+..++.++||||+||++|||++|+.||...... ...+.+.. .. .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~--~~~~~i~~---~~--------~------- 213 (325)
T cd05602 154 STFCGTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTA--EMYDNILN---KP--------L------- 213 (325)
T ss_pred ccccCCccccCHHHHcCCCCCCccccccccHHHHHHhcCCCCCCCCCHH--HHHHHHHh---CC--------c-------
Confidence 3346899999999999999999999999999999999999999753211 11111110 00 0
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.....++..+.+++.+|++.||.+||++.+.+..
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ 247 (325)
T cd05602 214 QLKPNITNSARHLLEGLLQKDRTKRLGAKDDFME 247 (325)
T ss_pred CCCCCCCHHHHHHHHHHcccCHHHCCCCCCCHHH
Confidence 0011344567899999999999999998754443
No 205
>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta. Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways
Probab=100.00 E-value=3.8e-36 Score=320.58 Aligned_cols=242 Identities=21% Similarity=0.264 Sum_probs=191.6
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|+.++.++ +||||+++++++.+.+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 80 (327)
T cd05617 1 RVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCFQTTSRLFLVIEYVNG 80 (327)
T ss_pred CeeeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEEEeCCEEEEEEeCCCC
Confidence 36999999999999865 67899999997653 23455678899999888 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++.... .+++..+..++.|++.||+||| +.+|+||||||+||++++++.+||+|||+++....... ..
T Consensus 81 ~~L~~~~~~~~-~l~~~~~~~~~~qi~~al~~lH----~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~--~~ 153 (327)
T cd05617 81 GDLMFHMQRQR-KLPEEHARFYAAEICIALNFLH----ERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGD--TT 153 (327)
T ss_pred CcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCC--ce
Confidence 99999887654 3899999999999999999999 67899999999999999999999999999975322111 22
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccC-cchHHHHHHHhcCCChhhhcchhhhhhHHh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG-EMSLRRWVKESLPHGLTEVVDANLVREEQA 740 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~-~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 740 (791)
...+||+.|+|||++.+..++.++|||||||++|||++|+.||+..... ......++....... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~------------~~- 220 (327)
T cd05617 154 STFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIITDNPDMNTEDYLFQVILEK------------PI- 220 (327)
T ss_pred ecccCCcccCCHHHHCCCCCCchheeehhHHHHHHHHhCCCCCCccCCCcccccHHHHHHHHHhC------------CC-
Confidence 3356899999999999999999999999999999999999999643221 111111111111000 00
Q ss_pred hHHHHHHHHHHHHHHhhccccCCCCCCCH
Q 003855 741 FSAKMDCILSIMDLALDCCIESPDMRINV 769 (791)
Q Consensus 741 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~ 769 (791)
..+...+..+.+++.+|++.||++||++
T Consensus 221 -~~p~~~~~~~~~li~~~L~~dP~~R~~~ 248 (327)
T cd05617 221 -RIPRFLSVKASHVLKGFLNKDPKERLGC 248 (327)
T ss_pred -CCCCCCCHHHHHHHHHHhccCHHHcCCC
Confidence 0111234567799999999999999985
No 206
>PTZ00036 glycogen synthase kinase; Provisional
Probab=100.00 E-value=2.3e-36 Score=333.62 Aligned_cols=262 Identities=23% Similarity=0.287 Sum_probs=191.8
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccC--------C
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNP--------D 570 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--------~ 570 (791)
..+|++.+.||+|+||.||+|... +++.||||++.... ....+|+.++++++||||+++++++... .
T Consensus 65 ~~~y~~~~~LG~G~fg~Vy~~~~~~~~~~vAiK~i~~~~----~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~ 140 (440)
T PTZ00036 65 NKSYKLGNIIGNGSFGVVYEAICIDTSEKVAIKKVLQDP----QYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNI 140 (440)
T ss_pred CCeEEEeEEEEeCCCEEEEEEEECCCCCEEEEEEEecCc----chHHHHHHHHHhcCCCCCcceeeeEeecccccCCCce
Confidence 457999999999999999999864 68899999875432 2334699999999999999998876321 2
Q ss_pred eeeEEEecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC-cEEEeee
Q 003855 571 FKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM-AAHVSDF 646 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~-~~kl~Df 646 (791)
..++||||+++ ++.+++.. ....+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+||+||
T Consensus 141 ~l~lvmE~~~~-~l~~~~~~~~~~~~~l~~~~~~~~~~qi~~gL~yLH----~~~IiHrDLKp~NILl~~~~~~vkL~DF 215 (440)
T PTZ00036 141 FLNVVMEFIPQ-TVHKYMKHYARNNHALPLFLVKLYSYQLCRALAYIH----SKFICHRDLKPQNLLIDPNTHTLKLCDF 215 (440)
T ss_pred EEEEEEecCCc-cHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCcCHHHEEEcCCCCceeeecc
Confidence 46689999974 78777752 3456899999999999999999999 67899999999999999664 7999999
Q ss_pred ccccccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC
Q 003855 647 GISKLLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG 725 (791)
Q Consensus 647 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (791)
|+|+.+..... .....||+.|+|||++.+ ..++.++|||||||++|||++|.+||.+.... ..+.+.+.......
T Consensus 216 Gla~~~~~~~~---~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~-~~~~~i~~~~~~p~ 291 (440)
T PTZ00036 216 GSAKNLLAGQR---SVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSV-DQLVRIIQVLGTPT 291 (440)
T ss_pred ccchhccCCCC---cccCCCCcCccCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHHHhCCCC
Confidence 99987643322 123467999999998765 46899999999999999999999999753221 11222111110000
Q ss_pred hh--hhcch--------hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 726 LT--EVVDA--------NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 726 ~~--~~~d~--------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.. ....+ ...........+...+.++.+++.+||+.||++|||+.|+++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~li~~~L~~dP~~R~ta~e~l~ 350 (440)
T PTZ00036 292 EDQLKEMNPNYADIKFPDVKPKDLKKVFPKGTPDDAINFISQFLKYEPLKRLNPIEALA 350 (440)
T ss_pred HHHHHHhchhhhcccCCccCchhHHHHhccCCCHHHHHHHHHHCCCChhHCcCHHHHhC
Confidence 00 00000 000000000111234567889999999999999999999984
No 207
>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t
Probab=100.00 E-value=2.3e-36 Score=312.28 Aligned_cols=254 Identities=28% Similarity=0.464 Sum_probs=205.6
Q ss_pred hhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.++|++.+.||+|+||.||+|..++++.||||.+..... ..+.+.+|+.++++++||||+++++++......++||||+
T Consensus 5 ~~~~~i~~~ig~g~~~~v~~~~~~~~~~~~vK~~~~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~ 83 (261)
T cd05034 5 RESLKLERKLGAGQFGEVWMGTWNGTTKVAVKTLKPGTM-SPEAFLQEAQIMKKLRHDKLVQLYAVCSEEEPIYIVTEYM 83 (261)
T ss_pred hhheeeeeeeccCcceEEEEEEEcCCceEEEEEecCCcc-CHHHHHHHHHHHhhCCCCCEeeeeeeeecCCceEEEEecc
Confidence 468999999999999999999988888999999875432 3457888999999999999999999999888999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++++|.+++.... ..+++..+..++.+++.|++||| +.+++|+||||+||++++++.+|++|||+++.......
T Consensus 84 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~i~~al~~lh----~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~- 158 (261)
T cd05034 84 SKGSLLDFLKSGEGKKLRLPQLVDMAAQIAEGMAYLE----SRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEY- 158 (261)
T ss_pred CCCCHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcchheEEEcCCCCEEECccccceeccchhh-
Confidence 9999999998653 45899999999999999999999 67899999999999999999999999999987643221
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
.......++..|+|||...+..++.++||||+|+++||+++ |+.||...... . ..+.+.....
T Consensus 159 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~t~g~~p~~~~~~~-~-~~~~~~~~~~-------------- 222 (261)
T cd05034 159 TAREGAKFPIKWTAPEAANYGRFTIKSDVWSFGILLTEIVTYGRVPYPGMTNR-E-VLEQVERGYR-------------- 222 (261)
T ss_pred hhhhccCCCccccCHHHhccCCcCchhHHHHHHHHHHHHHhCCCCCCCCCCHH-H-HHHHHHcCCC--------------
Confidence 11112234568999999988889999999999999999999 99998653211 1 1111111000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
.+.+..++..+.+++.+|++.+|++||+++++.+.|+.
T Consensus 223 ---~~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~l~~ 260 (261)
T cd05034 223 ---MPRPPNCPEELYDLMLQCWDKDPEERPTFEYLQSFLED 260 (261)
T ss_pred ---CCCCCCCCHHHHHHHHHHcccCcccCCCHHHHHHHHhc
Confidence 01111234668899999999999999999999998875
No 208
>PHA03211 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.3e-36 Score=329.58 Aligned_cols=265 Identities=18% Similarity=0.214 Sum_probs=199.0
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
...|.+.+.||+|+||.||+|... +++.||||... ...+.+|++++++++||||+++++++...+..++|||+
T Consensus 168 ~~gy~i~~~Lg~G~~G~Vy~a~~~~~~~~vavK~~~------~~~~~~E~~iL~~L~HpnIv~l~~~~~~~~~~~lv~e~ 241 (461)
T PHA03211 168 GLGFAIHRALTPGSEGCVFESSHPDYPQRVVVKAGW------YASSVHEARLLRRLSHPAVLALLDVRVVGGLTCLVLPK 241 (461)
T ss_pred cCCeEEEEEEccCCCeEEEEEEECCCCCEEEEeccc------ccCHHHHHHHHHHCCCCCCCcEEEEEEECCEEEEEEEc
Confidence 347999999999999999999975 57889999632 23456799999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+ .++|.+++......+++..+..++.|++.||.||| +.+|+||||||+|||++.++.+||+|||+++........
T Consensus 242 ~-~~~L~~~l~~~~~~l~~~~~~~i~~qi~~aL~yLH----~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~ 316 (461)
T PHA03211 242 Y-RSDLYTYLGARLRPLGLAQVTAVARQLLSAIDYIH----GEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWST 316 (461)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCEEECcCCHHHEEECCCCCEEEcccCCceeccccccc
Confidence 9 47999999876666999999999999999999999 678999999999999999999999999999876433222
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccC------cchHHHHHHHhcC--CChhhhc
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG------EMSLRRWVKESLP--HGLTEVV 730 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~------~~~~~~~~~~~~~--~~~~~~~ 730 (791)
.......||..|+|||++.+..++.++|||||||++|||++|..|+-..... ...+.+.+..... .......
T Consensus 317 ~~~~~~~GT~~Y~APE~~~~~~~~~~sDvwSlGviL~El~~g~~~lf~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~~~ 396 (461)
T PHA03211 317 PFHYGIAGTVDTNAPEVLAGDPYTPSVDIWSAGLVIFEAAVHTASLFSASRGDERRPYDAQILRIIRQAQVHVDEFPQHA 396 (461)
T ss_pred ccccccCCCcCCcCHHHHcCCCCCchHHHHHHHHHHHHHHHcCCCcccCCcccccCCcHHHHHHHHHhhccccccCCCCc
Confidence 2223356899999999999999999999999999999999988654321110 1112222221100 0000000
Q ss_pred chhhhhhHH-----------h---hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 731 DANLVREEQ-----------A---FSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 731 d~~~~~~~~-----------~---~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
...+..... . ..........+.+++.+||+.||++|||+.|+++.
T Consensus 397 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~DP~~RPsa~elL~h 455 (461)
T PHA03211 397 GSRLVSQYRHRAARNRRPAYTRPAWTRYYKLDLDVEYLVCRALTFDGARRPSAAELLRL 455 (461)
T ss_pred chHHHHHHHhhhhcccCCccCCcchhhhccccchHHHHHHHHcccChhhCcCHHHHhhC
Confidence 000000000 0 00001223467899999999999999999999863
No 209
>KOG0579 consensus Ste20-like serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.5e-37 Score=322.18 Aligned_cols=251 Identities=25% Similarity=0.330 Sum_probs=209.0
Q ss_pred hccccccccCCCcceEEEEEEecC-CcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISD-GTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
+-|.++..+|.|+||.||+|..++ +-..|.|++.....+..++|.-|+++++.++||+||++++.|.-.+..++..|||
T Consensus 32 d~WeIiGELGDGAFGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~enkLwiliEFC 111 (1187)
T KOG0579|consen 32 DHWEIIGELGDGAFGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYFENKLWILIEFC 111 (1187)
T ss_pred HHHHHHhhhcCccchhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhccCceEEEEeec
Confidence 346677889999999999999764 4446778988888888999999999999999999999999999899999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
.||-+...+-.-+..+.+.++.-+++|++.||.||| +..|+|||||+.|||++-+|.++++|||.+..... ...
T Consensus 112 ~GGAVDaimlEL~r~LtE~QIqvvc~q~ldALn~LH----s~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~--t~q 185 (1187)
T KOG0579|consen 112 GGGAVDAIMLELGRVLTEDQIQVVCYQVLDALNWLH----SQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKS--TRQ 185 (1187)
T ss_pred CCchHhHHHHHhccccchHHHHHHHHHHHHHHHHHh----hcchhhhhccccceEEEecCcEeeecccccccchh--HHh
Confidence 999999999888888999999999999999999999 77899999999999999999999999999864321 122
Q ss_pred eeecccccccccCCCc-----cCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 660 TQTMTMATIGYMAPEY-----GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~-----~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
......||+.|||||+ ..+.+|+.++||||||+++.||..+.+|.....+....+ . -.
T Consensus 186 kRDsFIGTPYWMAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVll-K----------------ia 248 (1187)
T KOG0579|consen 186 KRDSFIGTPYWMAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLL-K----------------IA 248 (1187)
T ss_pred hhccccCCcccccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHH-H----------------Hh
Confidence 3445689999999995 567889999999999999999999999976533221110 1 11
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..++.....+..++..+.+++.+|+..||..||+++++++
T Consensus 249 KSePPTLlqPS~Ws~~F~DfLk~cL~Knp~~Rp~aaqll~ 288 (1187)
T KOG0579|consen 249 KSEPPTLLQPSHWSRSFSDFLKRCLVKNPRNRPPAAQLLK 288 (1187)
T ss_pred hcCCCcccCcchhhhHHHHHHHHHHhcCCccCCCHHHHhh
Confidence 1122222334567788999999999999999999999875
No 210
>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=8.5e-36 Score=322.61 Aligned_cols=264 Identities=22% Similarity=0.240 Sum_probs=196.6
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccC------
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP------ 569 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 569 (791)
..++|++.+.||+|+||.||+|... +|+.||||++.... ......+.+|+.+++.++||||+++++++...
T Consensus 19 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 98 (359)
T cd07876 19 VLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQKSLEEF 98 (359)
T ss_pred hhhceEEEEEeecCCCEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCCCcccc
Confidence 4578999999999999999999864 68999999986432 23445677899999999999999999988543
Q ss_pred CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
...++||||+++ ++.+.+.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 99 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~~L~~LH----~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a 170 (359)
T cd07876 99 QDVYLVMELMDA-NLCQVIHM---ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 170 (359)
T ss_pred ceeEEEEeCCCc-CHHHHHhc---cCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEecCCCc
Confidence 347899999965 67776643 2788899999999999999999 678999999999999999999999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhh
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEV 729 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (791)
+...... ......||+.|+|||.+.+..++.++||||+||++|||++|+.||.+.... ..+...... ......+.
T Consensus 171 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~el~tg~~pf~~~~~~-~~~~~~~~~-~~~~~~~~ 245 (359)
T cd07876 171 RTACTNF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHI-DQWNKVIEQ-LGTPSAEF 245 (359)
T ss_pred cccccCc---cCCCCcccCCCCCchhccCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHh-cCCCcHHH
Confidence 7643221 122346899999999999999999999999999999999999999753211 111111110 00000000
Q ss_pred cchh---hh---hhH------------------HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 730 VDAN---LV---REE------------------QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 730 ~d~~---~~---~~~------------------~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.+.. .. ... .........+..+.+++.+|++.||++|||+.|+++.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~R~t~~e~l~h 315 (359)
T cd07876 246 MNRLQPTVRNYVENRPQYPGISFEELFPDWIFPSESERDKLKTSQARDLLSKMLVIDPDKRISVDEALRH 315 (359)
T ss_pred HHHHHHHHHHHHhhCCCCCCcchhhhccccccccccccccccchhHHHHHHHHhccCcccCCCHHHHhcC
Confidence 0000 00 000 0000001124567899999999999999999999873
No 211
>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5. Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p
Probab=100.00 E-value=4.2e-36 Score=313.34 Aligned_cols=249 Identities=23% Similarity=0.295 Sum_probs=198.1
Q ss_pred hccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+..|+.++++++||||+++++++...+..++||||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 80 (279)
T cd06619 1 QDIQYQEILGHGNGGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAFFVENRISICTEF 80 (279)
T ss_pred CcchheeeeccCCCeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEEEECCEEEEEEec
Confidence 3678889999999999999986 478999999986542 33456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++|+|..+. .+++..+..++.|++.|+.||| +.+|+|+||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~l~~~~-----~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~-- 149 (279)
T cd06619 81 MDGGSLDVYR-----KIPEHVLGRIAVAVVKGLTYLW----SLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSI-- 149 (279)
T ss_pred CCCCChHHhh-----cCCHHHHHHHHHHHHHHHHHHH----HCCEeeCCCCHHHEEECCCCCEEEeeCCcceeccccc--
Confidence 9999997653 2678889999999999999999 6789999999999999999999999999997654321
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcch--HHHHHHHhcCCChhhhcchhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMS--LRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
.....|+..|+|||++.+..++.++||||||+++|||++|+.||......... ...+........ .+..
T Consensus 150 --~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~-----~~~~-- 220 (279)
T cd06619 150 --AKTYVGTNAYMAPERISGEQYGIHSDVWSLGISFMELALGRFPYPQIQKNQGSLMPLQLLQCIVDED-----PPVL-- 220 (279)
T ss_pred --ccCCCCChhhcCceeecCCCCCCcchHHHHHHHHHHHHhCCCCchhhcccccccchHHHHHHHhccC-----CCCC--
Confidence 22346889999999999889999999999999999999999999753322111 011111000000 0000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.....+.++.+++.+|++.+|++||++.|+++.
T Consensus 221 ------~~~~~~~~~~~li~~~l~~~P~~Rp~~~eil~~ 253 (279)
T cd06619 221 ------PVGQFSEKFVHFITQCMRKQPKERPAPENLMDH 253 (279)
T ss_pred ------CCCcCCHHHHHHHHHHhhCChhhCCCHHHHhcC
Confidence 011234567899999999999999999999864
No 212
>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,
Probab=100.00 E-value=5.9e-36 Score=319.67 Aligned_cols=254 Identities=22% Similarity=0.265 Sum_probs=197.4
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+++.. +++.||+|++.... ....+.+.+|+.++..++||||+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (331)
T cd05597 1 DDFEILKVIGRGAFGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAFQDENNLYLVM 80 (331)
T ss_pred CCceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEEecCCeEEEEE
Confidence 47889999999999999999965 68999999987532 233456888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 e~~~g~~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~ 156 (331)
T cd05597 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVLAIDSVH----QLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADG 156 (331)
T ss_pred ecCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----hCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCC
Confidence 999999999999875556899999999999999999999 7789999999999999999999999999997654332
Q ss_pred CcceeecccccccccCCCccCC-----CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcC-CChhhhc
Q 003855 657 DSVTQTMTMATIGYMAPEYGSE-----GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP-HGLTEVV 730 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 730 (791)
. .......||+.|+|||++.. ..++.++|||||||++|||++|+.||..... .+....... .....
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~-----~~~~~~i~~~~~~~~-- 228 (331)
T cd05597 157 T-VQSNVAVGTPDYISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHKEHFQ-- 228 (331)
T ss_pred C-ccccceeccccccCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCH-----HHHHHHHHcCCCccc--
Confidence 2 12223468999999998753 4578899999999999999999999965211 111111110 00000
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCC--CCCCCHHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESP--DMRINVTDAAAK 775 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P--~~RPt~~ev~~~ 775 (791)
+. +....++..+.+++.+|+..++ ..||++.++++.
T Consensus 229 ---~~------~~~~~~~~~~~~li~~ll~~~~~r~~r~~~~~~l~h 266 (331)
T cd05597 229 ---FP------PDVTDVSEEAKDLIRRLICSPETRLGRNGLQDFKDH 266 (331)
T ss_pred ---CC------CccCCCCHHHHHHHHHHccCcccccCCCCHHHHhcC
Confidence 00 0011245667788888775533 337899888765
No 213
>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase. Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ
Probab=100.00 E-value=9.3e-36 Score=306.79 Aligned_cols=251 Identities=28% Similarity=0.420 Sum_probs=202.4
Q ss_pred hccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
.+|+..+.||+|+||.||+|.+.+++.+|+|.+..... ....+..|++++++++|||++++++++......++||||++
T Consensus 4 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~~ 82 (256)
T cd05112 4 SELTLVQEIGSGQFGLVWLGYWLEKRKVAIKTIREGAM-SEEDFIEEAQVMMKLSHPKLVQLYGVCTERSPICLVFEFME 82 (256)
T ss_pred hHeEEEeeecCcccceEEEEEEeCCCeEEEEECCCCCC-CHHHHHHHHHHHHhCCCCCeeeEEEEEccCCceEEEEEcCC
Confidence 46888899999999999999987788999998864432 23568889999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+|+|.+++......+++..+..++.+++.|++||| +.+++||||||+||+++.++.++|+|||+++....... ..
T Consensus 83 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-~~ 157 (256)
T cd05112 83 HGCLSDYLRAQRGKFSQETLLGMCLDVCEGMAYLE----SSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQY-TS 157 (256)
T ss_pred CCcHHHHHHhCccCCCHHHHHHHHHHHHHHHHHHH----HCCccccccccceEEEcCCCeEEECCCcceeecccCcc-cc
Confidence 99999999876666899999999999999999999 67899999999999999999999999999986543221 11
Q ss_pred eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 661 QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
.....++.+|+|||...++.++.++||||||+++|||++ |+.||...... ....... ... ....
T Consensus 158 ~~~~~~~~~~~aPe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~-----~~~~~~~-~~~-~~~~-------- 222 (256)
T cd05112 158 STGTKFPVKWSSPEVFSFSKYSSKSDVWSFGVLMWEVFSEGKTPYENRSNS-----EVVETIN-AGF-RLYK-------- 222 (256)
T ss_pred cCCCccchhhcCHhHhccCCcChHHHHHHHHHHHHHHHcCCCCCCCcCCHH-----HHHHHHh-CCC-CCCC--------
Confidence 122235678999999988889999999999999999998 89998653211 1111110 000 0000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
+...+..+.+++.+||+.+|++||++.|+++.|
T Consensus 223 ----~~~~~~~~~~l~~~~l~~~p~~Rp~~~~~l~~l 255 (256)
T cd05112 223 ----PRLASQSVYELMQHCWKERPEDRPSFSLLLHQL 255 (256)
T ss_pred ----CCCCCHHHHHHHHHHcccChhhCCCHHHHHHhh
Confidence 011345688999999999999999999999886
No 214
>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ
Probab=100.00 E-value=1e-35 Score=307.66 Aligned_cols=253 Identities=25% Similarity=0.362 Sum_probs=205.6
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
++|+..+.||+|+||.||+|... +++.+|+|++........+.+.+|+.++++++||||+++++++.+.+..+++|||+
T Consensus 3 ~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~l~~e~~ 82 (262)
T cd06613 3 EDYELIQRIGSGTYGDVYKARDIATGELVAIKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSYLRRDKLWIVMEYC 82 (262)
T ss_pred cceEEEEEecCCCceEEEEeEecCCCCEEEEEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEEEeCCEEEEEEeCC
Confidence 57889999999999999999874 67889999998765556678899999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
++++|.+++......++...+..++.|++.|+.||| ..+++||||+|+||++++++.++|+|||.+........
T Consensus 83 ~~~~l~~~~~~~~~~l~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~-- 156 (262)
T cd06613 83 GGGSLQDIYQVTRGPLSELQIAYVCRETLKGLAYLH----ETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIA-- 156 (262)
T ss_pred CCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH----hCCceecCCChhhEEECCCCCEEECccccchhhhhhhh--
Confidence 999999999876556899999999999999999999 67899999999999999999999999999976543221
Q ss_pred eeecccccccccCCCccCCC---CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 660 TQTMTMATIGYMAPEYGSEG---IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
......++..|+|||..... .++.++||||||+++|||+||+.||......+.. ..... .... ....
T Consensus 157 ~~~~~~~~~~y~~Pe~~~~~~~~~~~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~~-~~~~~----~~~~---~~~~-- 226 (262)
T cd06613 157 KRKSFIGTPYWMAPEVAAVERKGGYDGKCDIWALGITAIELAELQPPMFDLHPMRAL-FLISK----SNFP---PPKL-- 226 (262)
T ss_pred ccccccCCccccCchhhcccccCCcCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHH-HHHHh----ccCC---Cccc--
Confidence 12234578899999998776 8899999999999999999999998753321111 00000 0000 0000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
......+.++.+++.+||..+|++||++.+++.
T Consensus 227 -----~~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 259 (262)
T cd06613 227 -----KDKEKWSPVFHDFIKKCLTKDPKKRPTATKLLQ 259 (262)
T ss_pred -----cchhhhhHHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 011234567889999999999999999999975
No 215
>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha. Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a
Probab=100.00 E-value=3.4e-36 Score=320.35 Aligned_cols=241 Identities=24% Similarity=0.277 Sum_probs=192.7
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhcc-CCccceeeeeeccCCeeeEEE
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVR-HRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~ 576 (791)
+|+..+.||+|+||.||+|+.. +|+.||+|++.... ....+.+..|..+++.+. |++|+++.+++.+.+..++||
T Consensus 1 ~f~~~~~lg~G~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (323)
T cd05615 1 DFNFLMVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCFQTVDRLYFVM 80 (323)
T ss_pred CceEEEEEEecCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEEecCCEEEEEE
Confidence 3677889999999999999865 78999999987543 233456777888888885 577888999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++..... +++.++..++.|++.||.||| +.+|+||||||+||++++++.+||+|||+++......
T Consensus 81 Ey~~~g~L~~~i~~~~~-l~~~~~~~i~~qi~~al~~lH----~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~ 155 (323)
T cd05615 81 EYVNGGDLMYHIQQVGK-FKEPQAVFYAAEISVGLFFLH----RRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDG 155 (323)
T ss_pred cCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEeccccccccCCCC
Confidence 99999999999976543 899999999999999999999 6789999999999999999999999999997543221
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
. ......||+.|+|||++.+..++.++||||+||++|||++|+.||..... ....+.+.. ...
T Consensus 156 ~--~~~~~~gt~~y~aPE~~~~~~~~~~~DiwslGvil~elltG~~pf~~~~~--~~~~~~i~~---~~~---------- 218 (323)
T cd05615 156 V--TTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPFDGEDE--DELFQSIME---HNV---------- 218 (323)
T ss_pred c--cccCccCCccccCHHHHcCCCCCCccchhhhHHHHHHHHhCCCCCCCCCH--HHHHHHHHh---CCC----------
Confidence 1 12234589999999999888899999999999999999999999975321 111111111 000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINV 769 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~ 769 (791)
..+..++.++.+++.+|++.+|++|++.
T Consensus 219 -----~~p~~~~~~~~~li~~~l~~~p~~R~~~ 246 (323)
T cd05615 219 -----SYPKSLSKEAVSICKGLMTKHPSKRLGC 246 (323)
T ss_pred -----CCCccCCHHHHHHHHHHcccCHhhCCCC
Confidence 0011234567799999999999999985
No 216
>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=3.5e-36 Score=316.39 Aligned_cols=249 Identities=22% Similarity=0.324 Sum_probs=203.5
Q ss_pred hccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.+|+..+.||.|+||.||+|.. .+++.||+|.+........+.+.+|+.+++.++||||+++++++...+..++|+||+
T Consensus 19 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~ 98 (296)
T cd06655 19 KKYTRYEKIGQGASGTVFTAIDVATGQEVAIKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSFLVGDELFVVMEYL 98 (296)
T ss_pred ceEEEEEEEecCCCeEEEEEEEcCCCcEEEEEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeEecCceEEEEEEec
Confidence 4688999999999999999985 478999999987665555677889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
++++|.+++... .+++.++..++.+++.|++||| +.+++||||||+||+++.++.+||+|||++........
T Consensus 99 ~~~~L~~~~~~~--~l~~~~~~~i~~~l~~al~~LH----~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~-- 170 (296)
T cd06655 99 AGGSLTDVVTET--CMDEAQIAAVCRECLQALEFLH----ANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQS-- 170 (296)
T ss_pred CCCcHHHHHHhc--CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEccCccchhcccccc--
Confidence 999999998754 3899999999999999999999 67899999999999999999999999999886544322
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
......++..|+|||.+.+..++.++|||||||++|||++|+.||......+. .. .+...... .
T Consensus 171 ~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~~lltg~~pf~~~~~~~~-~~-~~~~~~~~---~----------- 234 (296)
T cd06655 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRA-LY-LIATNGTP---E----------- 234 (296)
T ss_pred cCCCcCCCccccCcchhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHH-HH-HHHhcCCc---c-----------
Confidence 12234578899999999888899999999999999999999999975322111 11 11100000 0
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...+..++..+.+++.+||..||++||++.++++
T Consensus 235 -~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~il~ 268 (296)
T cd06655 235 -LQNPEKLSPIFRDFLNRCLEMDVEKRGSAKELLQ 268 (296)
T ss_pred -cCCcccCCHHHHHHHHHHhhcChhhCCCHHHHhh
Confidence 0011234566789999999999999999999975
No 217
>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,
Probab=100.00 E-value=1.2e-36 Score=324.46 Aligned_cols=242 Identities=26% Similarity=0.315 Sum_probs=189.6
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHH-HHHhccCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECE-VLRNVRHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~-~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. +|+.||+|++.... ......+..|.. +++.++||||+++++++...+..++||||+++
T Consensus 1 ~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~~~~~~~~lv~e~~~~ 80 (325)
T cd05604 1 KVIGKGSFGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSFQTTEKLYFVLDFVNG 80 (325)
T ss_pred CceeeCCCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEEecCCEEEEEEcCCCC
Confidence 46999999999999864 78999999987542 223344455544 56778999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|..++.... .+++..+..++.||+.||+||| +.+|+||||||+||++++++.+||+|||+++....... ..
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~al~~lH----~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~--~~ 153 (325)
T cd05604 81 GELFFHLQRER-SFPEPRARFYAAEIASALGYLH----SINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSD--TT 153 (325)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCC--Cc
Confidence 99999887654 4889999999999999999999 67899999999999999999999999999875422211 22
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....|++.|+|||++.+..++.++|||||||++|||++|+.||...... +.+....... ..
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DvwslG~il~el~~G~~pf~~~~~~-----~~~~~~~~~~--------~~------ 214 (325)
T cd05604 154 TTFCGTPEYLAPEVIRKQPYDNTVDWWCLGAVLYEMLYGLPPFYCRDVA-----EMYDNILHKP--------LV------ 214 (325)
T ss_pred ccccCChhhCCHHHHcCCCCCCcCccccccceehhhhcCCCCCCCCCHH-----HHHHHHHcCC--------cc------
Confidence 3346899999999999999999999999999999999999999653211 1111111100 00
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.....+..+.+++.+|++.+|++||++.+.++.
T Consensus 215 -~~~~~~~~~~~ll~~ll~~~p~~R~~~~~~~~~ 247 (325)
T cd05604 215 -LRPGASLTAWSILEELLEKDRQRRLGAKEDFLE 247 (325)
T ss_pred -CCCCCCHHHHHHHHHHhccCHHhcCCCCCCHHH
Confidence 001234567799999999999999988644333
No 218
>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases. Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l
Probab=100.00 E-value=5.9e-36 Score=310.72 Aligned_cols=248 Identities=30% Similarity=0.476 Sum_probs=194.9
Q ss_pred cccCCCcceEEEEEEec-CCc--EEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGT--DVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~--~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. ++. .+|+|.+.... ....+.+..|+.+++++ +||||+++++++...+..++||||+++
T Consensus 1 ~~lg~g~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (270)
T cd05047 1 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPH 80 (270)
T ss_pred CcCCCCCCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEEecCCCceEEEEeCCC
Confidence 36899999999999975 343 46888876432 34456788999999999 899999999999998899999999999
Q ss_pred CCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeee
Q 003855 582 GSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDF 646 (791)
Q Consensus 582 g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 646 (791)
|+|.+++.... ..+++.++..++.|++.|++||| +.+++||||||+||++++++.+|++||
T Consensus 81 ~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~al~~lH----~~~i~H~dikp~nili~~~~~~kl~df 156 (270)
T cd05047 81 GNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVARGMDYLS----QKQFIHRDLAARNILVGENYVAKIADF 156 (270)
T ss_pred CcHHHHHHhccccccccccccccCCcCCCCHHHHHHHHHHHHHHHHHHH----HCCEeecccccceEEEcCCCeEEECCC
Confidence 99999997532 24788999999999999999999 678999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCC
Q 003855 647 GISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHG 725 (791)
Q Consensus 647 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (791)
|++..... .........+..|+|||+.....++.++|||||||++|||++ |..||...... ..........
T Consensus 157 gl~~~~~~---~~~~~~~~~~~~y~apE~~~~~~~~~~~Di~slG~il~el~~~g~~pf~~~~~~-----~~~~~~~~~~ 228 (270)
T cd05047 157 GLSRGQEV---YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCA-----ELYEKLPQGY 228 (270)
T ss_pred CCccccch---hhhccCCCCccccCChHHHccCCCCchhhHHHHHHHHHHHHcCCCCCccccCHH-----HHHHHHhCCC
Confidence 99863221 111112234567999999988889999999999999999997 99998653211 1111111000
Q ss_pred hhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 726 LTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 726 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
. ...+..++.++.+++.+|++.+|.+||++.|+++.|+++.
T Consensus 229 ~--------------~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~~~~ 269 (270)
T cd05047 229 R--------------LEKPLNCDDEVYDLMRQCWREKPYERPSFAQILVSLNRML 269 (270)
T ss_pred C--------------CCCCCcCCHHHHHHHHHHcccChhhCCCHHHHHHHHHHhh
Confidence 0 0011124456789999999999999999999999998763
No 219
>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina
Probab=100.00 E-value=1e-35 Score=308.82 Aligned_cols=250 Identities=23% Similarity=0.349 Sum_probs=188.7
Q ss_pred ccCCCcceEEEEEEecC---CcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCC
Q 003855 508 LLGTGSFGSVYKGTISD---GTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGS 583 (791)
Q Consensus 508 ~ig~G~~g~Vy~~~~~~---~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 583 (791)
.||+|+||.||+|...+ ...+|+|.+.... ......+.+|+.+++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~~~~~~~~lv~e~~~~g~ 81 (269)
T cd05042 2 EIGNGWFGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQCIESIPYLLVLEFCPLGD 81 (269)
T ss_pred cCCccCCceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEECCCCceEEEEEeCCCCc
Confidence 69999999999997543 4568888775443 3345678889999999999999999999999999999999999999
Q ss_pred HHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 584 LEKWLYSHN----YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 584 L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
|.+++.... ...++.....++.||+.|++||| +.+|+||||||+||++++++.+||+|||+++.........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~ 157 (269)
T cd05042 82 LKNYLRSNRGMVAQMAQKDVLQRMACEVASGLLWLH----QADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYI 157 (269)
T ss_pred HHHHHHhccccccccccHHHHHHHHHHHHHHHHHHH----hcCEecccccHhheEecCCCcEEEeccccccccccchhee
Confidence 999998643 22467788899999999999999 6789999999999999999999999999997643332222
Q ss_pred eeecccccccccCCCccC-------CCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 660 TQTMTMATIGYMAPEYGS-------EGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~-------~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
......++..|+|||+.. ...++.++|||||||++|||++ |..||....+.+ .+...+. .......+
T Consensus 158 ~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~-~~~~~~~----~~~~~~~~ 232 (269)
T cd05042 158 TKDCHAVPLRWLAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQ-VLKQVVR----EQDIKLPK 232 (269)
T ss_pred ccCCCCCcccccCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHH-HHHHHhh----ccCccCCC
Confidence 223334677899999753 3457889999999999999999 778886532211 1111111 11001111
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
+.. ...++..+.+++..|+ .||++||+++||++.|
T Consensus 233 ~~~---------~~~~~~~~~~~~~~~~-~dp~~Rpt~~~v~~~l 267 (269)
T cd05042 233 PQL---------DLKYSDRWYEVMQFCW-LDPETRPTAEEVHELL 267 (269)
T ss_pred Ccc---------cccCCHHHHHHHHHHh-cCcccccCHHHHHHHh
Confidence 100 1134455678888998 5999999999999886
No 220
>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros. Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male
Probab=100.00 E-value=3.5e-36 Score=312.43 Aligned_cols=248 Identities=27% Similarity=0.481 Sum_probs=197.6
Q ss_pred cccCCCcceEEEEEEecC-------CcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 507 NLLGTGSFGSVYKGTISD-------GTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~-------~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+.||+|+||.||+|+..+ ++.||+|.+.... ......+.+|+.+++.++||||+++++++...+..++||||
T Consensus 1 ~~lg~g~~g~vy~~~~~~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (269)
T cd05044 1 NFLGSGAFGEVYEGTATDILGPGSGPIRVAVKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVCLLNEPQYIIMEL 80 (269)
T ss_pred CccccccceeEEeeeecccccCcccceeehhhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeeecCCCCeEEEEec
Confidence 369999999999998642 2579999875443 24456788999999999999999999999998999999999
Q ss_pred CCCCCHHHHHhhC------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC-----cEEEeeec
Q 003855 579 MPNGSLEKWLYSH------NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM-----AAHVSDFG 647 (791)
Q Consensus 579 ~~~g~L~~~l~~~------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~-----~~kl~Dfg 647 (791)
+++|+|.+++... ...+++.++..++.|++.|++||| +.+++|+||||+||+++.++ .++++|||
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg 156 (269)
T cd05044 81 MEGGDLLSYLRDARVERFGPPLLTLKELLDICLDVAKGCVYLE----QMHFIHRDLAARNCLVSEKGYDADRVVKIGDFG 156 (269)
T ss_pred cCCCcHHHHHHHhhhcccCCccccHHHHHHHHHHHHHHHHHHH----hCCcccCCCChheEEEecCCCCCCcceEECCcc
Confidence 9999999999742 234788999999999999999999 67899999999999999887 89999999
Q ss_pred cccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCCh
Q 003855 648 ISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGL 726 (791)
Q Consensus 648 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~ 726 (791)
+++...............++..|+|||++.++.++.++|||||||++|||+| |+.||..... ......+.. ..
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~ellt~g~~p~~~~~~--~~~~~~~~~---~~- 230 (269)
T cd05044 157 LARDIYKSDYYRKEGEGLLPVRWMAPESLLDGKFTTQSDVWSFGVLMWEILTLGQQPYPALNN--QEVLQHVTA---GG- 230 (269)
T ss_pred cccccccccccccCcccCCCccccCHHHHccCCcccchhHHHHHHHHHHHHHcCCCCCcccCH--HHHHHHHhc---CC-
Confidence 9986644332222223345778999999999999999999999999999998 9999864321 111111110 00
Q ss_pred hhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 727 TEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 727 ~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
....+..++..+.+++.+||+.+|++||++.++++.|.
T Consensus 231 -------------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~i~~~l~ 268 (269)
T cd05044 231 -------------RLQKPENCPDKIYQLMTNCWAQDPSERPTFDRIQEILQ 268 (269)
T ss_pred -------------ccCCcccchHHHHHHHHHHcCCCcccCCCHHHHHHHHh
Confidence 00111234567889999999999999999999999885
No 221
>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4. Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.
Probab=100.00 E-value=1.2e-35 Score=307.64 Aligned_cols=251 Identities=24% Similarity=0.367 Sum_probs=200.7
Q ss_pred ccccccccCCCcceEEEEEEecCCcEEEEEEeehhh------hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 502 EFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQL------ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
+|...+.||+|+||.||+|...+++.+|+|.+.... .+..+.+.+|++++++++|+||+++++++.+.+..++|
T Consensus 1 ~~~~~~~ig~g~~~~v~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv 80 (265)
T cd06631 1 EWTKGEVLGKGAYGTVYCGLTNQGQLIAVKQVELDTSNVLAAEKEYEKLQEEVDLLKSLKHVNIVQYLGTCLDDNTISIF 80 (265)
T ss_pred CccccceEeccCCeEEEEEEEcCCCeEEEEEeecCccchhhHHHHHHHHHHHHHHHHhcCCCCEeeEeeEeecCCeEEEE
Confidence 477889999999999999998889999999886432 23456788999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
|||+++++|.+++.+.. .+++..+..++.|++.|++||| ..+++|+||+|+||++++++.++|+|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~ 155 (265)
T cd06631 81 MEFVPGGSISSILNRFG-PLPEPVFCKYTKQILDGVAYLH----NNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWV 155 (265)
T ss_pred EecCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhc
Confidence 99999999999997654 3789999999999999999999 678999999999999999999999999999765321
Q ss_pred CC----cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 656 ED----SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 656 ~~----~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
.. ........++..|+|||+..+..++.++|||||||++|||++|+.||....... .... +.. .... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~-~~~~-~~~--~~~~----~ 227 (265)
T cd06631 156 GLHGTHSNMLKSMHGTPYWMAPEVINESGYGRKSDIWSIGCTVFEMATGKPPLASMDRLA-AMFY-IGA--HRGL----M 227 (265)
T ss_pred cccccccccccccCCCccccChhhhcCCCCcchhhHHHHHHHHHHHHhCCCccccCChHH-HHHH-hhh--ccCC----C
Confidence 11 111122457889999999988889999999999999999999999997532111 1100 000 0000 0
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+. .+..++.++.+++.+||+.+|++||++.|+++
T Consensus 228 ~~---------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~ 261 (265)
T cd06631 228 PR---------LPDSFSAAAIDFVTSCLTRDQHERPSALQLLR 261 (265)
T ss_pred CC---------CCCCCCHHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 00 01124466789999999999999999999875
No 222
>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati
Probab=100.00 E-value=4e-36 Score=309.32 Aligned_cols=249 Identities=20% Similarity=0.277 Sum_probs=201.6
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehh-hhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
+|++.+.||+|+||.||+++.. +++.||+|.+... .....+.+..|+.++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (255)
T cd08219 1 QYNVLRVVGEGSFGRALLVQHVNSDQKYAMKEIRLPKSSSAVEDSRKEAVLLAKMKHPNIVAFKESFEADGHLYIVMEYC 80 (255)
T ss_pred CceEEEEeeccCCeEEEEEEEcCCCceEEEEEEEcCcchHHHHHHHHHHHHHHhCCCCCcceEEEEEEECCEEEEEEeeC
Confidence 4778899999999999999865 7899999988643 2344567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++|+|.+++... ...++...+..++.|++.|+.||| +.+++|+||||+||++++++.++++|||.++.......
T Consensus 81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~- 155 (255)
T cd08219 81 DGGDLMQKIKLQRGKLFPEDTILQWFVQMCLGVQHIH----EKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGA- 155 (255)
T ss_pred CCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCcceEEECCCCcEEEcccCcceeeccccc-
Confidence 999999998753 345789999999999999999999 67899999999999999999999999999976643221
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
......++..|+|||+..+..++.++||||||+++|+|++|+.||..... ...+.........
T Consensus 156 -~~~~~~~~~~~~aPE~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~----------- 218 (255)
T cd08219 156 -YACTYVGTPYYVPPEIWENMPYNNKSDIWSLGCILYELCTLKHPFQANSW-----KNLILKVCQGSYK----------- 218 (255)
T ss_pred -ccccccCCccccCHHHHccCCcCchhhhhhhchhheehhhccCCCCCCCH-----HHHHHHHhcCCCC-----------
Confidence 12234588899999999888899999999999999999999999975211 1111111110000
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
+.+..++..+.+++.+||+.||++||++.+++..
T Consensus 219 ---~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~~ 252 (255)
T cd08219 219 ---PLPSHYSYELRSLIKQMFKRNPRSRPSATTILSR 252 (255)
T ss_pred ---CCCcccCHHHHHHHHHHHhCCcccCCCHHHHhhc
Confidence 0011234567899999999999999999999864
No 223
>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2. Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul
Probab=100.00 E-value=1.6e-36 Score=328.20 Aligned_cols=252 Identities=25% Similarity=0.370 Sum_probs=196.6
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|+..+.||+|+||.||+|+.. +++.||+|++.... ......+..|+.++.+++||+|+++++++.+.+..++||
T Consensus 1 ~~f~~~~~lG~G~~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~~~~~~~~lv~ 80 (360)
T cd05627 1 DDFESLKVIGRGAFGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSFQDKRNLYLIM 80 (360)
T ss_pred CCceEEEEEeeCCCEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 46888999999999999999865 68999999997543 334567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++..... +++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 E~~~gg~L~~~l~~~~~-l~~~~~~~~~~qi~~~L~~lH----~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~ 155 (360)
T cd05627 81 EFLPGGDMMTLLMKKDT-LSEEATQFYIAETVLAIDAIH----QLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAH 155 (360)
T ss_pred eCCCCccHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH----HCCeEccCCCHHHEEECCCCCEEEeeccCCccccccc
Confidence 99999999999986543 889999999999999999999 7899999999999999999999999999987543211
Q ss_pred Cc---------------------------------ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCC
Q 003855 657 DS---------------------------------VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 703 (791)
Q Consensus 657 ~~---------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p 703 (791)
.. ......+||+.|+|||++.+..++.++|||||||++|||++|+.|
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvilyel~tG~~P 235 (360)
T cd05627 156 RTEFYRNLTHNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDYIAPEVFMQTGYNKLCDWWSLGVIMYEMLIGYPP 235 (360)
T ss_pred ccccccccccCCcccccccccccccccccccccccccccccCCCccccCHHHHcCCCCCCcceeccccceeeecccCCCC
Confidence 00 001134689999999999999999999999999999999999999
Q ss_pred CCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCC---HHHHHH
Q 003855 704 TDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRIN---VTDAAA 774 (791)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt---~~ev~~ 774 (791)
|......+ .... +... .... ..+.....+.++.+++.+++ .||++|++ +.|+++
T Consensus 236 f~~~~~~~-~~~~-i~~~-~~~~-------------~~p~~~~~s~~~~~li~~l~-~~p~~R~~~~~~~ei~~ 292 (360)
T cd05627 236 FCSETPQE-TYRK-VMNW-KETL-------------VFPPEVPISEKAKDLILRFC-TDSENRIGSNGVEEIKS 292 (360)
T ss_pred CCCCCHHH-HHHH-HHcC-CCce-------------ecCCCCCCCHHHHHHHHHhc-cChhhcCCCCCHHHHhc
Confidence 97532211 1111 0000 0000 00111113455678888876 49999995 556554
No 224
>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=3.4e-36 Score=314.99 Aligned_cols=256 Identities=23% Similarity=0.298 Sum_probs=205.2
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
.++|++.+.||+|+||+||+|... +++.||+|++.... ....+.+.+|+++++.++||||+++++++......++|||
T Consensus 4 ~~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 83 (284)
T cd06620 4 NEDLETISDLGAGNGGSVSKVKHIPTGTVMAKKVVHIGAKSSVRKQILRELQIMHECRSPYIVSFYGAFLNENNICMCME 83 (284)
T ss_pred HHHHHHHHHcCCCCCeEEEEEEEcCCCcEEEEEEEEecCcchHHHHHHHHHHHHHHcCCCCcceEeeeEecCCEEEEEEe
Confidence 367888999999999999999865 68899999876543 3445678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|+++|+|.+++...+ .+++..+..++.+++.|+.|||+ ..+++||||+|+||++++++.++|+|||++.......
T Consensus 84 ~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH~---~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~- 158 (284)
T cd06620 84 FMDCGSLDRIYKKGG-PIPVEILGKIAVAVVEGLTYLYN---VHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSI- 158 (284)
T ss_pred cCCCCCHHHHHHhcc-CCCHHHHHHHHHHHHHHHHHHHH---hcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhc-
Confidence 999999999987654 48999999999999999999994 3479999999999999999999999999987543221
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcc------hHHHHHHHhcCCChhhhcc
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEM------SLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~------~~~~~~~~~~~~~~~~~~d 731 (791)
.....|+..|+|||++.++.++.++|||||||++||++||+.||......+. ....++......
T Consensus 159 ---~~~~~~~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~------- 228 (284)
T cd06620 159 ---ADTFVGTSTYMSPERIQGGKYTVKSDVWSLGISIIELALGKFPFAFSNIDDDGQDDPMGILDLLQQIVQE------- 228 (284)
T ss_pred ---cCccccCcccCCHHHHccCCCCccchHHHHHHHHHHHHhCCCCCcccchhhhhhhhhhHHHHHHHHHhhc-------
Confidence 1234688999999998888999999999999999999999999975432210 011111111100
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
.... .....++.++.+++.+|++.||++||++.|+++..
T Consensus 229 -----~~~~-~~~~~~~~~~~~li~~~l~~dp~~Rpt~~e~~~~~ 267 (284)
T cd06620 229 -----PPPR-LPSSDFPEDLRDFVDACLLKDPTERPTPQQLCAMP 267 (284)
T ss_pred -----cCCC-CCchhcCHHHHHHHHHHhcCCcccCcCHHHHhcCc
Confidence 0000 01113556788999999999999999999999864
No 225
>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity. Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....
Probab=100.00 E-value=3.4e-36 Score=310.87 Aligned_cols=252 Identities=31% Similarity=0.444 Sum_probs=198.9
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHH--HHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERA--FRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
|++.+.||+|+||+||+++.. +++.||+|++....... ......|+.++++++||||+++++++.+....++||||+
T Consensus 1 y~~~~~lg~G~~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~v~~~~ 80 (260)
T PF00069_consen 1 YRLVKKLGSGGFGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVFQDDNYLYIVMEYC 80 (260)
T ss_dssp EEEEEEEEEESSEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEEEESSEEEEEEEEE
T ss_pred CEEeEEEEeCCCEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhcccccccccccccccccccccccccccccc
Confidence 677899999999999999976 56789999998765332 223456999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
++++|.+++.... .+++..+..++.|+++||+||| +.+++|+||||+||++++++.++|+|||.+..... ...
T Consensus 81 ~~~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~Lh----~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~--~~~ 153 (260)
T PF00069_consen 81 PGGSLQDYLQKNK-PLSEEEILKIAYQILEALAYLH----SKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSE--NNE 153 (260)
T ss_dssp TTEBHHHHHHHHS-SBBHHHHHHHHHHHHHHHHHHH----HTTEEESSBSGGGEEESTTSEEEESSGTTTEESTS--TTS
T ss_pred ccccccccccccc-cccccccccccccccccccccc----ccccccccccccccccccccccccccccccccccc--ccc
Confidence 9999999998333 3899999999999999999999 67899999999999999999999999999986521 222
Q ss_pred eeecccccccccCCCccC-CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 660 TQTMTMATIGYMAPEYGS-EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
......++..|+|||+.. +..++.++||||+|+++|+|++|..||..... ......+.... ......
T Consensus 154 ~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~~--~~~~~~~~~~~--------~~~~~~-- 221 (260)
T PF00069_consen 154 NFNPFVGTPEYMAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESNS--DDQLEIIEKIL--------KRPLPS-- 221 (260)
T ss_dssp EBSSSSSSGGGSCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSSH--HHHHHHHHHHH--------HTHHHH--
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccccccccc--hhhhhhhhhcc--------cccccc--
Confidence 334456899999999988 88899999999999999999999999986410 01111110000 000000
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..........++.+++.+||+.||++||++.++++
T Consensus 222 -~~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~l~~ 256 (260)
T PF00069_consen 222 -SSQQSREKSEELRDLIKKMLSKDPEQRPSAEELLK 256 (260)
T ss_dssp -HTTSHTTSHHHHHHHHHHHSSSSGGGSTTHHHHHT
T ss_pred -cccccchhHHHHHHHHHHHccCChhHCcCHHHHhc
Confidence 00000111367899999999999999999999975
No 226
>PHA03207 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=4.7e-36 Score=327.72 Aligned_cols=265 Identities=21% Similarity=0.224 Sum_probs=200.7
Q ss_pred hhccccccccCCCcceEEEEEEec---CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS---DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
..+|++.+.||+|+||.||+|... .+..||+|.+... +...+|++++++++||||+++++++......++||
T Consensus 91 ~~~y~i~~~Lg~G~~g~Vy~~~~~~~~~~~~v~vK~~~~~-----~~~~~E~~il~~l~h~~iv~~~~~~~~~~~~~lv~ 165 (392)
T PHA03207 91 RMQYNILSSLTPGSEGEVFVCTKHGDEQRKKVIVKAVTGG-----KTPGREIDILKTISHRAIINLIHAYRWKSTVCMVM 165 (392)
T ss_pred cCceEEEEeecCCCCeEEEEEEEcCCccceeEEEEecccc-----ccHHHHHHHHHhcCCCCccceeeeEeeCCEEEEEe
Confidence 457999999999999999999753 4678999987643 23457999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
|++. ++|.+++... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.++|+|||+++......
T Consensus 166 e~~~-~~l~~~l~~~-~~l~~~~~~~i~~ql~~aL~~LH----~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~ 239 (392)
T PHA03207 166 PKYK-CDLFTYVDRS-GPLPLEQAITIQRRLLEALAYLH----GRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHP 239 (392)
T ss_pred hhcC-CCHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEcCCCCEEEccCccccccCccc
Confidence 9995 6999998543 45899999999999999999999 6789999999999999999999999999998765443
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCc--chHHHHHHHhc------CCChhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE--MSLRRWVKESL------PHGLTE 728 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~--~~~~~~~~~~~------~~~~~~ 728 (791)
.........||+.|+|||++....++.++|||||||++|||++|+.||.+..... ..+...+.... +.....
T Consensus 240 ~~~~~~~~~gt~~y~aPE~~~~~~~~~~~DvwslGvil~el~~g~~pf~~~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~ 319 (392)
T PHA03207 240 DTPQCYGWSGTLETNSPELLALDPYCAKTDIWSAGLVLFEMSVKNVTLFGKQVKSSSSQLRSIIRCMQVHPLEFPQNGST 319 (392)
T ss_pred ccccccccccccCccCHhHhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCCCCcHHHHHHHHHHhccCccccCCccch
Confidence 3333334578999999999998999999999999999999999999986543221 11222111110 000000
Q ss_pred hcchhhhhhH---------HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 729 VVDANLVREE---------QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 729 ~~d~~~~~~~---------~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.+...+.... .........+.++.+++.+|+..||++||++.|++..
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~Rpsa~e~l~~ 375 (392)
T PHA03207 320 NLCKHFKQYAIVLRPPYTIPPVIRKYGMHMDVEYLIAKMLTFDQEFRPSAQDILSL 375 (392)
T ss_pred hHHHHHHhhcccccCCccccchhhccCcchhHHHHHHHHhccChhhCCCHHHHhhC
Confidence 0000000000 0000011234567899999999999999999999864
No 227
>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase. Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl
Probab=100.00 E-value=6.6e-36 Score=315.55 Aligned_cols=264 Identities=19% Similarity=0.265 Sum_probs=201.2
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|+..+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.++++++||||+++++++..++..++||||
T Consensus 6 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~~~~~~~~lv~e~ 85 (301)
T cd07873 6 ETYIKLDKLGEGTYATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEY 85 (301)
T ss_pred cceEEeeEeccCcCEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEEecCCeEEEEEec
Confidence 57899999999999999999875 68899999986443 23334677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++ ++|.+++......+++..+..++.|+++||+||| +.+|+||||||+||++++++.++|+|||++........
T Consensus 86 ~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~aL~~lH----~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~- 159 (301)
T cd07873 86 LD-KDLKQYLDDCGNSINMHNVKLFLFQLLRGLNYCH----RRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTK- 159 (301)
T ss_pred cc-cCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCC-
Confidence 96 5999999876666899999999999999999999 77899999999999999999999999999976432221
Q ss_pred ceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC----Chhhhcchh
Q 003855 659 VTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH----GLTEVVDAN 733 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~----~~~~~~d~~ 733 (791)
......++..|+|||.+.+ ..++.++|||||||++|||+||+.||...... .....+...... .+....+..
T Consensus 160 -~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (301)
T cd07873 160 -TYSNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVE--EQLHFIFRILGTPTEETWPGILSNE 236 (301)
T ss_pred -cccccceeecccCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHcCCCChhhchhhhccc
Confidence 1222356889999998754 45788999999999999999999999753221 111111111110 011111000
Q ss_pred ---------hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 734 ---------LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 734 ---------~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..... .......++..+.+++.+|++.||.+|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~eil~ 285 (301)
T cd07873 237 EFKSYNYPKYRADC-LHNHAPRLDSDGAELLSKLLQFEGRKRISAEEAMK 285 (301)
T ss_pred cccccccCcccccc-HHhhcCCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 00000 00111234567889999999999999999999986
No 228
>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as
Probab=100.00 E-value=8.8e-36 Score=311.64 Aligned_cols=249 Identities=23% Similarity=0.310 Sum_probs=199.3
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
|+..+.||+|+||.||+|... +++.||||.+.... ....+.+..|+.++++++|++|+.+++.+.+.+..++||||
T Consensus 2 f~~~~~ig~G~~g~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05630 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGESMALNEKQILEKVNSRFVVSLAYAYETKDALCLVLTL 81 (285)
T ss_pred ceeeEEeecCCCeEEEEEEEcCCCceEEEEEEehhhccchHHHHHHHHHHHHHHhCCCCCeeeeeEEEecCCEEEEEEEe
Confidence 667789999999999999865 78999999886543 22334577899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~g~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~ 157 (285)
T cd05630 82 MNGGDLKFHIYHMGEAGFEEGRAVFYAAEICCGLEDLH----QERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT 157 (285)
T ss_pred cCCCcHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCcc
Confidence 9999999998643 335889999999999999999999 67899999999999999999999999999976543221
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
.....|+..|+|||++.+..++.++|||||||++|||++|+.||........ .... .. ..+ ...
T Consensus 158 ---~~~~~g~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~Pf~~~~~~~~-~~~~-~~--------~~~-~~~-- 221 (285)
T cd05630 158 ---IKGRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIK-REEV-ER--------LVK-EVQ-- 221 (285)
T ss_pred ---ccCCCCCccccChHHHcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCccch-HHHH-Hh--------hhh-hhh--
Confidence 1234689999999999988999999999999999999999999975322110 0000 00 000 000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRIN-----VTDAAA 774 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt-----~~ev~~ 774 (791)
......++..+.+++.+||+.||++||| +.|+++
T Consensus 222 ---~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~~~~~ 260 (285)
T cd05630 222 ---EEYSEKFSPDARSLCKMLLCKDPKERLGCQGGGAREVKE 260 (285)
T ss_pred ---hhcCccCCHHHHHHHHHHhhcCHHHccCCCCCchHHHHc
Confidence 0011234566789999999999999999 888877
No 229
>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with
Probab=100.00 E-value=1.3e-35 Score=310.45 Aligned_cols=249 Identities=22% Similarity=0.287 Sum_probs=198.2
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
|+..+.||+|+||+||+|... +++.||+|.+.... ......+..|++++++++|+||+.+.+++..++..++||||
T Consensus 2 ~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~~~~~~~~lv~e~ 81 (285)
T cd05632 2 FRQYRVLGKGGFGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAYETKDALCLVLTI 81 (285)
T ss_pred ceEEEEEecCCCeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEEecCCEEEEEEEe
Confidence 667789999999999999875 78899999986543 22334577899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+++|+|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||++++++.++|+|||++........
T Consensus 82 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lH----~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~ 157 (285)
T cd05632 82 MNGGDLKFHIYNMGNPGFEEERALFYAAEILCGLEDLH----RENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGES 157 (285)
T ss_pred ccCccHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCc
Confidence 9999999988754 335899999999999999999999 67899999999999999999999999999976543221
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
.....|+..|+|||++.+..++.++|+|||||++|||++|+.||........ ...+ .........
T Consensus 158 ---~~~~~g~~~~~aPE~~~~~~~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~-~~~~-~~~~~~~~~---------- 222 (285)
T cd05632 158 ---IRGRVGTVGYMAPEVLNNQRYTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVK-REEV-DRRVLETEE---------- 222 (285)
T ss_pred ---ccCCCCCcCccChHHhcCCCCCcccchHHHHHHHHHHHhCCCCCCCCCHHHH-HHHH-HHhhhcccc----------
Confidence 1234689999999999888999999999999999999999999975322111 1111 110000000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCC-----HHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRIN-----VTDAAA 774 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt-----~~ev~~ 774 (791)
.....++..+.+++..|++.||++||+ +.++++
T Consensus 223 ----~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~~~l~~ 260 (285)
T cd05632 223 ----VYSAKFSEEAKSICKMLLTKDPKQRLGCQEEGAGEVKR 260 (285)
T ss_pred ----ccCccCCHHHHHHHHHHccCCHhHcCCCcccChHHHHc
Confidence 001124456789999999999999999 666665
No 230
>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding
Probab=100.00 E-value=5.8e-36 Score=315.03 Aligned_cols=250 Identities=24% Similarity=0.319 Sum_probs=203.8
Q ss_pred hhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
..+|++.+.||+|+||.||+|.. .+++.||+|.+........+.+..|+.+++.++||||+++++++..++..++||||
T Consensus 18 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 97 (297)
T cd06656 18 KKKYTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEY 97 (297)
T ss_pred hhhceeeeeeccCCCeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEEecCCEEEEeecc
Confidence 36799999999999999999986 47999999998765555556788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++++|.+++.+.. +++.++..++.|++.||.||| +.+++||||||+||+++.++.++|+|||++.........
T Consensus 98 ~~~~~L~~~~~~~~--~~~~~~~~~~~~l~~~L~~LH----~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~ 171 (297)
T cd06656 98 LAGGSLTDVVTETC--MDEGQIAAVCRECLQALDFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSK 171 (297)
T ss_pred cCCCCHHHHHHhCC--CCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccC
Confidence 99999999997543 788999999999999999999 678999999999999999999999999999865433221
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
.....+++.|+|||...+..++.++|||||||++|++++|+.||............ ........
T Consensus 172 --~~~~~~~~~y~aPE~~~~~~~~~~~Di~slGvil~~l~tg~~pf~~~~~~~~~~~~-----~~~~~~~~--------- 235 (297)
T cd06656 172 --RSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLI-----ATNGTPEL--------- 235 (297)
T ss_pred --cCcccCCccccCHHHHcCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcchheeee-----ccCCCCCC---------
Confidence 22345788999999998888999999999999999999999999653221110000 00000000
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+...+..+.+++.+||+.+|++||++.++++
T Consensus 236 ---~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (297)
T cd06656 236 ---QNPERLSAVFRDFLNRCLEMDVDRRGSAKELLQ 268 (297)
T ss_pred ---CCccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 011133456779999999999999999999987
No 231
>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3. Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity
Probab=100.00 E-value=2e-36 Score=311.99 Aligned_cols=240 Identities=22% Similarity=0.358 Sum_probs=190.6
Q ss_pred cccCCCcceEEEEEEecC--------CcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 507 NLLGTGSFGSVYKGTISD--------GTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~--------~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+.||+|+||.||+|.... ...||+|.+........+.+.+|+.+++.++||||+++++++..++..++||||
T Consensus 1 ~~lg~G~~~~Vy~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~ 80 (258)
T cd05078 1 ESLGQGTFTKIFKGIRREVGDYGELHKTEVLLKVLDKSHRNYSESFFEAASMMSQLSHKHLVLNYGVCVCGDESIMVQEY 80 (258)
T ss_pred CCCCcccchhheeeeecccccccccccchhhHHhhcchhHHHHHHHHHHHHHHHhCCCCChhheeeEEEeCCCcEEEEec
Confidence 369999999999998632 234888888665555567888899999999999999999999998899999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCc--------EEEeeecccc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMA--------AHVSDFGISK 650 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~--------~kl~Dfgla~ 650 (791)
+++|+|.++++.....+++..+..++.||+.|++||| +.+|+||||||+||+++.++. ++++|||++.
T Consensus 81 ~~~g~L~~~l~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~ 156 (258)
T cd05078 81 VKFGSLDTYLKKNKNLINISWKLEVAKQLAWALHFLE----DKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISI 156 (258)
T ss_pred CCCCcHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCccceEEEecccccccCCCceEEeccccccc
Confidence 9999999999876666899999999999999999999 678999999999999987765 6999999987
Q ss_pred ccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCC-CCCCccccCcchHHHHHHHhcCCChhh
Q 003855 651 LLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRK-RPTDEMFTGEMSLRRWVKESLPHGLTE 728 (791)
Q Consensus 651 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~-~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (791)
..... ....++..|+|||++.+ ..++.++|||||||++|||++|. .|+...... ........
T Consensus 157 ~~~~~------~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~~~~~~~~~~--~~~~~~~~-------- 220 (258)
T cd05078 157 TVLPK------EILLERIPWVPPECIENPQNLSLAADKWSFGTTLWEIFSGGDKPLSALDSQ--KKLQFYED-------- 220 (258)
T ss_pred ccCCc------hhccccCCccCchhccCCCCCCchhhHHHHHHHHHHHHcCCCCChhhccHH--HHHHHHHc--------
Confidence 55322 22357888999999876 45799999999999999999985 555432111 00110000
Q ss_pred hcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 729 VVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 729 ~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
... .+.....++.+++.+||+.+|++|||+.++++.|+
T Consensus 221 ---------~~~--~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~~l~ 258 (258)
T cd05078 221 ---------RHQ--LPAPKWTELANLINQCMDYEPDFRPSFRAIIRDLN 258 (258)
T ss_pred ---------ccc--CCCCCcHHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 000 01112355789999999999999999999999863
No 232
>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase. Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa
Probab=100.00 E-value=1.9e-35 Score=305.08 Aligned_cols=253 Identities=23% Similarity=0.418 Sum_probs=204.4
Q ss_pred hhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.++|++.+.||+|+||.||+|...++..||+|.+.... ...+.+.+|++++++++|+||+++.+++.+ ...++||||+
T Consensus 5 ~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~-~~~~~v~e~~ 82 (260)
T cd05073 5 RESLKLEKKLGAGQFGEVWMATYNKHTKVAVKTMKPGS-MSVEAFLAEANVMKTLQHDKLVKLHAVVTK-EPIYIITEFM 82 (260)
T ss_pred ccceeEEeEecCccceEEEEEEecCCccEEEEecCCCh-hHHHHHHHHHHHHHhcCCCCcceEEEEEcC-CCeEEEEEeC
Confidence 46789999999999999999998788889999876542 334678889999999999999999999887 7789999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++|+|.+++.+. ....++.++..++.|++.||.||| ..+++||||+|+||+++.++.+||+|||.+........
T Consensus 83 ~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~aL~~lH----~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~- 157 (260)
T cd05073 83 AKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIE----QRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEY- 157 (260)
T ss_pred CCCcHHHHHHhCCccccCHHHHHHHHHHHHHHHHHHH----hCCccccccCcceEEEcCCCcEEECCCcceeeccCCCc-
Confidence 999999999864 345788999999999999999999 67899999999999999999999999999976543221
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
.......++..|+|||++..+.++.++|||||||++||++| |+.||..... .....++......
T Consensus 158 ~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~t~g~~p~~~~~~--~~~~~~~~~~~~~------------- 222 (260)
T cd05073 158 TAREGAKFPIKWTAPEAINFGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSN--PEVIRALERGYRM------------- 222 (260)
T ss_pred ccccCCcccccccCHhHhccCCcCccccchHHHHHHHHHHhcCCCCCCCCCH--HHHHHHHhCCCCC-------------
Confidence 11222345678999999988889999999999999999999 8999875321 1122222111000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
+.....+.++.+++.+|++.+|++||++.++.+.|+.
T Consensus 223 ----~~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~l~~~L~~ 259 (260)
T cd05073 223 ----PRPENCPEELYNIMMRCWKNRPEERPTFEYIQSVLDD 259 (260)
T ss_pred ----CCcccCCHHHHHHHHHHcccCcccCcCHHHHHHHHhc
Confidence 0111344668899999999999999999999999875
No 233
>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.
Probab=100.00 E-value=4.5e-36 Score=320.56 Aligned_cols=255 Identities=22% Similarity=0.259 Sum_probs=198.0
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+++.. +++.||+|++.... ......+.+|..++..++|++|+++++++.+.+..++||
T Consensus 1 d~y~i~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~~~~~~~~lv~ 80 (331)
T cd05624 1 DDFEIIKVIGRGAFGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAFQDENYLYLVM 80 (331)
T ss_pred CCceEEEEEeeCCCeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEEEcCCEEEEEE
Confidence 47899999999999999999975 68889999987532 233456788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 81 Ey~~gg~L~~~l~~~~~~l~~~~~~~~~~qi~~~L~~lH----~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~ 156 (331)
T cd05624 81 DYYVGGDLLTLLSKFEDRLPEDMARFYIAEMVLAIHSIH----QLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDG 156 (331)
T ss_pred eCCCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCC
Confidence 999999999999875556899999999999999999999 7899999999999999999999999999998764432
Q ss_pred CcceeecccccccccCCCccCC-----CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 657 DSVTQTMTMATIGYMAPEYGSE-----GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
. .......|+++|+|||++.+ +.++.++|||||||++|||++|+.||...... ............-.+.
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~-----~~~~~i~~~~~~~~~p 230 (331)
T cd05624 157 T-VQSSVAVGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLV-----ETYGKIMNHEERFQFP 230 (331)
T ss_pred c-eeeccccCCcccCCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHH-----HHHHHHHcCCCcccCC
Confidence 2 12233468999999998765 56888999999999999999999999652211 1111110000000000
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDM--RINVTDAAAK 775 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPt~~ev~~~ 775 (791)
.....++.++.+++.+|+...+++ |+++.++++.
T Consensus 231 ----------~~~~~~~~~~~~li~~ll~~~~~~~~~~~~~~~~~h 266 (331)
T cd05624 231 ----------SHITDVSEEAKDLIQRLICSRERRLGQNGIEDFKKH 266 (331)
T ss_pred ----------CccccCCHHHHHHHHHHccCchhhcCCCCHHHHhcC
Confidence 001123566788999998866544 4678877653
No 234
>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha. Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw
Probab=100.00 E-value=5.9e-36 Score=320.01 Aligned_cols=255 Identities=22% Similarity=0.267 Sum_probs=197.9
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|++.+.||+|+||.||+++.+ +++.||+|++.... ......+..|+.++..++|++|+++++++.+.+..++||
T Consensus 1 ~~y~~~~~lG~G~fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (332)
T cd05623 1 EDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAFQDENNLYLVM 80 (332)
T ss_pred CCceEEEEEEeCCCeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEEecCCEEEEEE
Confidence 46889999999999999999975 57889999986432 233445788999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++|+|.+++......+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++.......
T Consensus 81 ey~~~g~L~~~l~~~~~~l~~~~~~~~~~qi~~al~~lH----~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~ 156 (332)
T cd05623 81 DYYVGGDLLTLLSKFEDRLPEDMARFYLAEMVIAIDSVH----QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDG 156 (332)
T ss_pred eccCCCcHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCeEecCCCHHHEEECCCCCEEEeecchheecccCC
Confidence 999999999999875556899999999999999999999 6789999999999999999999999999997653322
Q ss_pred CcceeecccccccccCCCccC-----CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 657 DSVTQTMTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
. .......||+.|+|||++. ...++.++|||||||++|||++|+.||..... ...+........ ..
T Consensus 157 ~-~~~~~~~gt~~y~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~-----~~~~~~i~~~~~-~~-- 227 (332)
T cd05623 157 T-VQSSVAVGTPDYISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESL-----VETYGKIMNHKE-RF-- 227 (332)
T ss_pred c-ceecccccCccccCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCH-----HHHHHHHhCCCc-cc--
Confidence 1 1223356899999999875 35688999999999999999999999975211 111111110000 00
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCC--CCCHHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDM--RINVTDAAAK 775 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~--RPt~~ev~~~ 775 (791)
.+ ......++..+.+++.+|+..+|.+ |+++.|+++.
T Consensus 228 -~~------p~~~~~~s~~~~~li~~ll~~~~~r~~r~~~~~~~~h 266 (332)
T cd05623 228 -QF------PAQVTDVSEDAKDLIRRLICSREHRLGQNGIEDFKQH 266 (332)
T ss_pred -cC------CCccccCCHHHHHHHHHHccChhhhcCCCCHHHHhCC
Confidence 00 0001134566788999988654444 6889988765
No 235
>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2. Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.
Probab=100.00 E-value=2.6e-36 Score=321.39 Aligned_cols=237 Identities=26% Similarity=0.300 Sum_probs=186.4
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHH-HHHHhccCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSEC-EVLRNVRHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~-~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|+.. +++.||+|++.... ......+..|. .+++.++||||+++++++.+.+..++||||+++
T Consensus 1 ~~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~~~~~~~~lv~e~~~~ 80 (321)
T cd05603 1 KVIGKGSFGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSFQTAEKLYFVLDYVNG 80 (321)
T ss_pred CeeeeCCCEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEEEcCCEEEEEEcCCCC
Confidence 36999999999999975 68899999987543 22233444454 467889999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++.... .+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++...... ...
T Consensus 81 ~~L~~~l~~~~-~~~~~~~~~~~~qi~~~L~~lH----~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~--~~~ 153 (321)
T cd05603 81 GELFFHLQRER-CFLEPRARFYAAEVASAIGYLH----SLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPE--ETT 153 (321)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCC--Ccc
Confidence 99999887644 3788889999999999999999 6789999999999999999999999999987532221 122
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....|++.|+|||.+.+..++.++|||||||++|||++|+.||..... ........... .
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----~~~~~~i~~~~--------~------- 213 (321)
T cd05603 154 STFCGTPEYLAPEVLRKEPYDRTVDWWCLGAVLYEMLYGLPPFYSRDV-----SQMYDNILHKP--------L------- 213 (321)
T ss_pred ccccCCcccCCHHHhcCCCCCCcCcccccchhhhhhhcCCCCCCCCCH-----HHHHHHHhcCC--------C-------
Confidence 334689999999999888999999999999999999999999965311 11111111100 0
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVT 770 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~ 770 (791)
..+...+..+.+++.+|++.||++||++.
T Consensus 214 ~~~~~~~~~~~~li~~~l~~~p~~R~~~~ 242 (321)
T cd05603 214 QLPGGKTVAACDLLVGLLHKDQRRRLGAK 242 (321)
T ss_pred CCCCCCCHHHHHHHHHHccCCHhhcCCCC
Confidence 00112335577999999999999999764
No 236
>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase. Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ
Probab=100.00 E-value=3.3e-36 Score=313.20 Aligned_cols=252 Identities=23% Similarity=0.317 Sum_probs=197.9
Q ss_pred HHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeecc------C
Q 003855 498 RATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCSN------P 569 (791)
Q Consensus 498 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~------~ 569 (791)
.+.+.|+..+.||+|+||.||+|... +++.||+|++..... ....+..|+.++.++ +||||+++++++.. .
T Consensus 3 ~~~~~y~~~~~lg~g~~g~vy~~~~~~~~~~~aik~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~ 81 (272)
T cd06637 3 DPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGD-EEEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMD 81 (272)
T ss_pred ChhhhhhHHHheeecCCeEEEEEEEcCCCcEEEEEEEEcCCc-cHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCCCCCC
Confidence 34577888999999999999999865 688999999865432 335678899999998 79999999999864 2
Q ss_pred CeeeEEEecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecc
Q 003855 570 DFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGI 648 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgl 648 (791)
...++||||+++|+|.+++... ...+++..+..++.|++.|++||| +.+|+||||||+||++++++.++|+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~~~~l~~~~~~~~~~qi~~~l~~LH----~~~ivh~dl~~~nili~~~~~~~l~Dfg~ 157 (272)
T cd06637 82 DQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH----QHKVIHRDIKGQNVLLTENAEVKLVDFGV 157 (272)
T ss_pred cEEEEEEEcCCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCCccCCCCHHHEEECCCCCEEEccCCC
Confidence 4678999999999999999864 345889999999999999999999 67899999999999999999999999999
Q ss_pred ccccCCCCCcceeecccccccccCCCccC-----CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcC
Q 003855 649 SKLLGEGEDSVTQTMTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP 723 (791)
Q Consensus 649 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (791)
++...... .......|+..|+|||++. +..++.++|||||||++|||++|+.||....... ...... .
T Consensus 158 ~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~~~----~~~~~~-~ 230 (272)
T cd06637 158 SAQLDRTV--GRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMR----ALFLIP-R 230 (272)
T ss_pred ceeccccc--ccCCcccccccccCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCHHH----HHHHHh-c
Confidence 98654322 1223346889999999875 3468889999999999999999999986532211 111000 0
Q ss_pred CChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 724 HGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 724 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
... ... ....++..+.+++.+||..+|.+|||+.|+++
T Consensus 231 ~~~-----~~~--------~~~~~~~~~~~li~~~l~~~p~~Rpt~~~il~ 268 (272)
T cd06637 231 NPA-----PRL--------KSKKWSKKFQSFIESCLVKNHSQRPTTEQLMK 268 (272)
T ss_pred CCC-----CCC--------CCCCcCHHHHHHHHHHcCCChhhCCCHHHHhh
Confidence 000 000 01123456789999999999999999999975
No 237
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.1e-38 Score=330.53 Aligned_cols=373 Identities=27% Similarity=0.374 Sum_probs=329.1
Q ss_pred CCCCCCeeecCCCccc-ccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCC
Q 003855 11 NLQNLQYLVFAENNLS-GLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLV 89 (791)
Q Consensus 11 ~l~~L~~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 89 (791)
=|+-.+-.|+++|.++ +..|.....++++++|.|...++. .+|+.+.+ +.+|++|.+++|++. .+.+.+..++.|+
T Consensus 5 VLpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~-lqkLEHLs~~HN~L~-~vhGELs~Lp~LR 81 (1255)
T KOG0444|consen 5 VLPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSR-LQKLEHLSMAHNQLI-SVHGELSDLPRLR 81 (1255)
T ss_pred ccceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHH-HhhhhhhhhhhhhhH-hhhhhhccchhhH
Confidence 3556778899999998 678999999999999999999998 99999998 789999999999999 6778899999999
Q ss_pred EEeccCccccc-cccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChhhhhhhhh
Q 003855 90 ALDLGFNSFAG-HILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPVIGNFSAS 168 (791)
Q Consensus 90 ~L~L~~N~i~~-~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~ 168 (791)
.+++..|++.. -+|..+-.|..|+.|+|++|++...| ..+..-+++-.|+||+|+|..+ |..++-...-
T Consensus 82 sv~~R~N~LKnsGiP~diF~l~dLt~lDLShNqL~EvP---------~~LE~AKn~iVLNLS~N~IetI-Pn~lfinLtD 151 (1255)
T KOG0444|consen 82 SVIVRDNNLKNSGIPTDIFRLKDLTILDLSHNQLREVP---------TNLEYAKNSIVLNLSYNNIETI-PNSLFINLTD 151 (1255)
T ss_pred HHhhhccccccCCCCchhcccccceeeecchhhhhhcc---------hhhhhhcCcEEEEcccCccccC-CchHHHhhHh
Confidence 99999999864 34666778999999999999999765 4577889999999999999955 5555544456
Q ss_pred hhhhhcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCc-ccCCccccccCCCceEEec
Q 003855 169 LQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLE-GSIPYDLCHLKLMFGIRLT 247 (791)
Q Consensus 169 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~ 247 (791)
|-.|+|++|++. .+|+.+..+.+|++|+|++|.+...--..+..+++|++|.+++.+-+ .-+|..+..+.+|..+|+|
T Consensus 152 LLfLDLS~NrLe-~LPPQ~RRL~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS 230 (1255)
T KOG0444|consen 152 LLFLDLSNNRLE-MLPPQIRRLSMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLS 230 (1255)
T ss_pred Hhhhccccchhh-hcCHHHHHHhhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhcccc
Confidence 889999999998 67888999999999999999997555556677889999999987654 3578899999999999999
Q ss_pred CCccCCCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCC-C
Q 003855 248 GNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSG-D 326 (791)
Q Consensus 248 ~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~-~ 326 (791)
.|.+. .+|+++-++++|+.|+||+|+|+ .+........+|++|+||.|+++ .+|.++++++.|+.|++.+|+++- -
T Consensus 231 ~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeG 307 (1255)
T KOG0444|consen 231 ENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEG 307 (1255)
T ss_pred ccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccC
Confidence 99999 89999999999999999999998 55666777889999999999998 899999999999999999999873 3
Q ss_pred CCcchhccccccccccccccCCCCCCcccCCCCCCcEEEccCCccCCCCchhhhhcccCceEEccCCCCcccCCCC
Q 003855 327 IPSTIGALKDLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQLKQFNVSHNRLEGEIPVK 402 (791)
Q Consensus 327 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 402 (791)
+|+.++.+.+|+.+..++|.+. .+|+.++.+.+|+.|.|++|++- .+|+.+.-++.|+.||+..|+=--.+|..
T Consensus 308 iPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP 381 (1255)
T KOG0444|consen 308 IPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKP 381 (1255)
T ss_pred CccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCc
Confidence 7889999999999999999999 99999999999999999999998 89999999999999999999865555543
No 238
>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases. Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki
Probab=100.00 E-value=1.5e-35 Score=305.91 Aligned_cols=238 Identities=21% Similarity=0.377 Sum_probs=189.7
Q ss_pred cccCCCcceEEEEEEecCCc-----------EEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 507 NLLGTGSFGSVYKGTISDGT-----------DVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~~~-----------~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
+.||+|+||.||+|...+.. .|++|++...... ...+.+|+.++++++||||+++++++.. ...++|
T Consensus 1 ~~lg~G~~~~v~~~~~~~~~~~~~~~~~~~~~v~~k~~~~~~~~-~~~~~~e~~~l~~l~h~~i~~~~~~~~~-~~~~lv 78 (259)
T cd05037 1 EHLGQGTFTNIYKGVLRVQSDLDIVGPGQEVSVVLKVLGSDHRD-SLAFFETASLMSQLSHKHLVKLYGVCVR-DENIMV 78 (259)
T ss_pred CcccccccceEEEEEEeccCCccccCCccceeeeeeccccchhh-HHHHHHHHHHHHcCCCcchhheeeEEec-CCcEEE
Confidence 46999999999999976432 5788877654333 5788899999999999999999999987 778999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC-------cEEEeeecc
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM-------AAHVSDFGI 648 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~-------~~kl~Dfgl 648 (791)
|||+++|+|.+++......+++..+..++.||+.||+||| +.+|+||||||+||+++.++ .+|++|||+
T Consensus 79 ~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~ 154 (259)
T cd05037 79 EEYVKFGPLDVFLHREKNNVSLHWKLDVAKQLASALHYLE----DKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGI 154 (259)
T ss_pred EEcCCCCcHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHh----hCCeecccCccceEEEecCccccCCceeEEeCCCCc
Confidence 9999999999999876656899999999999999999999 67899999999999999888 799999999
Q ss_pred ccccCCCCCcceeecccccccccCCCccCCC--CCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCC
Q 003855 649 SKLLGEGEDSVTQTMTMATIGYMAPEYGSEG--IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHG 725 (791)
Q Consensus 649 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~--~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (791)
++.... .....++..|+|||++... .++.++|||||||++|||++ |..|+..... .....++.. ..
T Consensus 155 a~~~~~------~~~~~~~~~y~aPE~~~~~~~~~~~~~Di~slG~~~~~l~~~~~~p~~~~~~--~~~~~~~~~---~~ 223 (259)
T cd05037 155 PITVLS------REERVERIPWIAPECIRNGQASLTIAADKWSFGTTLLEICSNGEEPLSTLSS--SEKERFYQD---QH 223 (259)
T ss_pred cccccc------ccccccCCCccChhhhcCCCCCcchhhHHHHHHHHHHHHHhCCCCCcccCCc--hhHHHHHhc---CC
Confidence 986543 1223467789999998776 78999999999999999999 5677755321 111111110 00
Q ss_pred hhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 726 LTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 726 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
.. +. .....+.+++.+||..+|++||++.|+++.|+
T Consensus 224 ~~--------------~~--~~~~~~~~li~~~l~~~p~~Rpt~~~il~~l~ 259 (259)
T cd05037 224 RL--------------PM--PDCAELANLINQCWTYDPTKRPSFRAILRDLN 259 (259)
T ss_pred CC--------------CC--CCchHHHHHHHHHhccChhhCCCHHHHHHhcC
Confidence 00 00 00145779999999999999999999998763
No 239
>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is
Probab=100.00 E-value=1.8e-35 Score=318.16 Aligned_cols=266 Identities=23% Similarity=0.279 Sum_probs=198.3
Q ss_pred HHHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccC---
Q 003855 496 IQRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP--- 569 (791)
Q Consensus 496 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--- 569 (791)
.....++|++.+.||+|+||.||+|... +++.||||++.... ....+.+.+|+.++++++||||+++++++...
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07878 10 VWEVPERYQNLTPVGSGAYGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPATSI 89 (343)
T ss_pred HhhhhhhhhhheecccCCCeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccccc
Confidence 3455688999999999999999999864 78899999986542 22345677899999999999999999987532
Q ss_pred ---CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeee
Q 003855 570 ---DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDF 646 (791)
Q Consensus 570 ---~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 646 (791)
...++++|++ +++|.+++... .+++..+..++.|++.||.||| +.+|+||||||+||++++++.+||+||
T Consensus 90 ~~~~~~~~~~~~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~aL~~LH----~~~ivHrdikp~Nil~~~~~~~kl~Df 162 (343)
T cd07878 90 ENFNEVYLVTNLM-GADLNNIVKCQ--KLSDEHVQFLIYQLLRGLKYIH----SAGIIHRDLKPSNVAVNEDCELRILDF 162 (343)
T ss_pred cccCcEEEEeecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeecccCChhhEEECCCCCEEEcCC
Confidence 4568999988 78999888643 3899999999999999999999 678999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC
Q 003855 647 GISKLLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG 725 (791)
Q Consensus 647 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (791)
|+++..... .....||..|+|||++.+ ..++.++|||||||++|||++|+.||..... ...+.++..... ..
T Consensus 163 g~~~~~~~~-----~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~~-~~ 235 (343)
T cd07878 163 GLARQADDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDY-IDQLKRIMEVVG-TP 235 (343)
T ss_pred ccceecCCC-----cCCccccccccCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhC-CC
Confidence 999865432 123468999999998866 5689999999999999999999999965321 111122111110 00
Q ss_pred hhhhc---chhhhhhH----Hhh------HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 726 LTEVV---DANLVREE----QAF------SAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 726 ~~~~~---d~~~~~~~----~~~------~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..+.. ........ ... .......+.+.+++.+|++.||++|||+.|+++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dp~~R~s~~ell~h 298 (343)
T cd07878 236 SPEVLKKISSEHARKYIQSLPHMPQQDLKKIFRGANPLAIDLLEKMLVLDSDKRISASEALAH 298 (343)
T ss_pred CHHHHHhcchhhHHHHhhccccccchhHHHhccCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 00000000 000 0001233457899999999999999999999854
No 240
>KOG0986 consensus G protein-coupled receptor kinase [Signal transduction mechanisms]
Probab=100.00 E-value=5.1e-37 Score=308.20 Aligned_cols=248 Identities=25% Similarity=0.347 Sum_probs=207.2
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
.+.|+.-++||+|+||+||-++.+ +|+.+|.|.+.+.. +........|..+++++..|+||.+-.+|+.++..++|
T Consensus 184 ~n~F~~~RvlGkGGFGEV~acqvraTGKMYAcKkL~KKRiKkr~ge~maLnEk~iL~kV~s~FiVslaYAfeTkd~LClV 263 (591)
T KOG0986|consen 184 KNTFRVYRVLGKGGFGEVCACQVRATGKMYACKKLDKKRIKKRKGETMALNEKQILEKVSSPFIVSLAYAFETKDALCLV 263 (591)
T ss_pred ccceeeeEEEecccccceeEEEEecchhhHHHHHHHHHHHHHhhhhHHhhHHHHHHHHhccCcEEEEeeeecCCCceEEE
Confidence 456888899999999999999865 79999999886553 33344567899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 576 LEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
+..|.||||.-+|...+ ..+++..+.-++.+|+.||++|| ..+||+||+||+|||+|+.|+++|+|.|+|..+..
T Consensus 264 LtlMNGGDLkfHiyn~g~~gF~e~ra~FYAAEi~cGLehlH----~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~ 339 (591)
T KOG0986|consen 264 LTLMNGGDLKFHIYNHGNPGFDEQRARFYAAEIICGLEHLH----RRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPE 339 (591)
T ss_pred EEeecCCceeEEeeccCCCCCchHHHHHHHHHHHhhHHHHH----hcceeeccCChhheeeccCCCeEeeccceEEecCC
Confidence 99999999999998654 35899999999999999999999 67899999999999999999999999999998876
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
+.. ....+||.||||||++..+.|+...|+||+||++|||+.|+.||....+.. -.+.+|++.
T Consensus 340 g~~---~~~rvGT~GYMAPEvl~ne~Y~~s~Dwf~lGCllYemi~G~sPFr~~KeKv--------------k~eEvdrr~ 402 (591)
T KOG0986|consen 340 GKP---IRGRVGTVGYMAPEVLQNEVYDFSPDWFSLGCLLYEMIAGHSPFRQRKEKV--------------KREEVDRRT 402 (591)
T ss_pred CCc---cccccCcccccCHHHHcCCcccCCccHHHHHhHHHHHHcccCchhhhhhhh--------------hHHHHHHHH
Confidence 543 334589999999999999999999999999999999999999996532211 112344444
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVT 770 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ 770 (791)
.......+ ...++++.++....++.||++|....
T Consensus 403 ~~~~~ey~--~kFS~eakslc~~LL~Kdp~~RLGcr 436 (591)
T KOG0986|consen 403 LEDPEEYS--DKFSEEAKSLCEGLLTKDPEKRLGCR 436 (591)
T ss_pred hcchhhcc--cccCHHHHHHHHHHHccCHHHhccCC
Confidence 44333322 45677888999999999999997543
No 241
>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)
Probab=100.00 E-value=2e-35 Score=307.50 Aligned_cols=248 Identities=26% Similarity=0.329 Sum_probs=202.8
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|+..+.||.|+||.||+|+.. +++.||+|++.... ......+.+|+.+++.++||||+++++++.++...++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (274)
T cd06609 1 ELFTLLECIGKGSFGEVYKAIDKRTNQVVAIKVIDLEEAEDEIEDIQQEIQFLSQCRSPYITKYYGSFLKGSKLWIIMEY 80 (274)
T ss_pred ChhhhhhhhcCCCCeEEEEEEECCCCeEEEEEEeeccccchHHHHHHHHHHHHHHcCCCCeeeeeEEEEECCeEEEEEEe
Confidence 36888899999999999999965 68899999987553 34456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++++|.+++... .+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++++|||+++......
T Consensus 81 ~~~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~-- 152 (274)
T cd06609 81 CGGGSCLDLLKPG--KLDETYIAFILREVLLGLEYLH----EEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTM-- 152 (274)
T ss_pred eCCCcHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEcccccceeecccc--
Confidence 9999999999865 5899999999999999999999 6789999999999999999999999999998775432
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
.......++..|+|||++.+..++.++||||||+++|||+||+.||....... ....+..... +.+.
T Consensus 153 ~~~~~~~~~~~y~~PE~~~~~~~~~~sDv~slG~il~~l~tg~~p~~~~~~~~--~~~~~~~~~~--------~~~~--- 219 (274)
T cd06609 153 SKRNTFVGTPFWMAPEVIKQSGYDEKADIWSLGITAIELAKGEPPLSDLHPMR--VLFLIPKNNP--------PSLE--- 219 (274)
T ss_pred cccccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHhCCCCcccCchHH--HHHHhhhcCC--------CCCc---
Confidence 12223457889999999988889999999999999999999999996532111 0000000000 0000
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
. ..++.++.+++.+||..+|++||+++++++
T Consensus 220 ----~-~~~~~~~~~~l~~~l~~~p~~Rpt~~~il~ 250 (274)
T cd06609 220 ----G-NKFSKPFKDFVSLCLNKDPKERPSAKELLK 250 (274)
T ss_pred ----c-cccCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 0 014556789999999999999999999976
No 242
>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter
Probab=100.00 E-value=1.6e-35 Score=308.70 Aligned_cols=248 Identities=24% Similarity=0.363 Sum_probs=203.0
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
..|+..+.||+|+||.||+|... +++.||+|++.... ......+..|+.++++++||||+++++++.+....++||||
T Consensus 4 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06640 4 ELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HhhhhhhhcccCCCeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEEEECCEEEEEEec
Confidence 35777889999999999999975 68899999987543 34567788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++|+|.+++... .+++.++..++.|++.|++||| +.+++|+||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~L~~~i~~~--~l~~~~~~~~~~~l~~~l~~lh----~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06640 84 LGGGSALDLLRAG--PFDEFQIATMLKEILKGLDYLH----SEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----hCCccCcCCChhhEEEcCCCCEEEcccccceeccCCcc-
Confidence 9999999999754 3788999999999999999999 67899999999999999999999999999976643321
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
......++..|+|||++.+..++.++|||||||++|||+||+.||........ .... ..... +
T Consensus 157 -~~~~~~~~~~y~apE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~-----~~~~-~~~~~----~------ 219 (277)
T cd06640 157 -KRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRV-----LFLI-PKNNP----P------ 219 (277)
T ss_pred -ccccccCcccccCHhHhccCCCccHHHHHHHHHHHHHHHHCCCCCCCcChHhH-----hhhh-hcCCC----C------
Confidence 22234578899999999888899999999999999999999999875432211 0000 00000 0
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.....++..+.+++.+||+.+|++||++.|+++.
T Consensus 220 ---~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 253 (277)
T cd06640 220 ---TLTGEFSKPFKEFIDACLNKDPSFRPTAKELLKH 253 (277)
T ss_pred ---CCchhhhHHHHHHHHHHcccCcccCcCHHHHHhC
Confidence 1112356678899999999999999999999765
No 243
>KOG0200 consensus Fibroblast/platelet-derived growth factor receptor and related receptor tyrosine kinases [Signal transduction mechanisms]
Probab=100.00 E-value=5.5e-36 Score=340.19 Aligned_cols=258 Identities=25% Similarity=0.431 Sum_probs=212.8
Q ss_pred hccccccccCCCcceEEEEEEec----C----CcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS----D----GTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPD 570 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~----~----~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~ 570 (791)
++....+.+|+|.||.||+|... . ...||||.++... ..+.+.+..|+++|+.+ +||||+.++|+|..++
T Consensus 296 ~~l~~~~~lg~g~fG~v~~~~~~~~~~~~~~~~~~VaVK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t~~~ 375 (609)
T KOG0200|consen 296 ENLKLGKYLGEGAFGQVVKALLFGLSKALLSIYVTVAVKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACTQDG 375 (609)
T ss_pred hhccccceeecccccceEeEEEeecccccccceEEEEEEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeeccCC
Confidence 44456669999999999999743 1 4579999987554 35567899999999999 6999999999999999
Q ss_pred eeeEEEecCCCCCHHHHHhhCC---------------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEe
Q 003855 571 FKALVLEFMPNGSLEKWLYSHN---------------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILL 635 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~---------------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill 635 (791)
..++|+||++.|+|.++++..+ ..+.......++.|||.|++||+ +.+++|||+.++|||+
T Consensus 376 ~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~~~~~~~~~~~L~~~dLlsfa~QIa~GMe~L~----~~~~vHRDLAaRNVLi 451 (609)
T KOG0200|consen 376 PLYVIVEYAEHGDLLEFLRKKRVTESIDGSGVFPNERDALTTKDLLSFAYQIANGMEYLA----SVPCVHRDLAARNVLI 451 (609)
T ss_pred ceEEEEEeccCCcHHHHHHhccccccccccCCCccccCCcCHHHHHHHHHHHHHHHHHHh----hCCccchhhhhhhEEe
Confidence 9999999999999999999766 34888999999999999999999 7789999999999999
Q ss_pred CCCCcEEEeeeccccccCCCCCccee-ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcch
Q 003855 636 DENMAAHVSDFGISKLLGEGEDSVTQ-TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMS 713 (791)
Q Consensus 636 ~~~~~~kl~Dfgla~~~~~~~~~~~~-~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~ 713 (791)
+++..+||+|||+|+...+...+... +...-+..|||||.+....|+.|+|||||||++||++| |..||.+.... ..
T Consensus 452 ~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~LP~kWmApEsl~~~~ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~-~~ 530 (609)
T KOG0200|consen 452 TKNKVIKIADFGLARDHYNKDYYRTKSSAGTLPVKWMAPESLFDRVFTSKSDVWSFGILLWEIFTLGGTPYPGIPPT-EE 530 (609)
T ss_pred cCCCEEEEccccceeccCCCCceEecCCCCccceeecCHHHhccCcccccchhhHHHHHHHHHhhCCCCCCCCCCcH-HH
Confidence 99999999999999976555443322 11113557999999999999999999999999999999 88999762211 11
Q ss_pred HHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 714 LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 714 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
+.+ ...++.+...+..|+.+++++|..||+.+|++||++.++++.++...
T Consensus 531 l~~-----------------~l~~G~r~~~P~~c~~eiY~iM~~CW~~~p~~RP~F~~~~~~~~~~l 580 (609)
T KOG0200|consen 531 LLE-----------------FLKEGNRMEQPEHCSDEIYDLMKSCWNADPEDRPTFSECVEFFEKHL 580 (609)
T ss_pred HHH-----------------HHhcCCCCCCCCCCCHHHHHHHHHHhCCCcccCCCHHHHHHHHHHHH
Confidence 111 22233344556678899999999999999999999999999999853
No 244
>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity
Probab=100.00 E-value=1.4e-35 Score=307.13 Aligned_cols=253 Identities=25% Similarity=0.295 Sum_probs=204.8
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|+..+.||+|+||.||+|..+ +++.||+|.+.... ....+.+.+|++++++++||||+++++++......++|+||
T Consensus 1 ~~~~~~~~ig~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (265)
T cd06605 1 DDLEYLGELGAGNSGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAFYNNGDISICMEY 80 (265)
T ss_pred CcchHHHHhcCCCCeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheeeecCCEEEEEEEe
Confidence 36778889999999999999976 68999999887653 34456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSS-APIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+++++|.+++......++...+..++.|++.|++||| + .+++||||||+||++++++.++|+|||.+........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~ 156 (265)
T cd06605 81 MDGGSLDKILKEVQGRIPERILGKIAVAVLKGLTYLH----EKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLA 156 (265)
T ss_pred cCCCcHHHHHHHccCCCCHHHHHHHHHHHHHHHHHHc----CCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHh
Confidence 9999999999876566899999999999999999999 5 7899999999999999999999999999876532211
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
. ...++..|+|||+..+..++.++||||||+++|+|++|+.||...........+.+.........
T Consensus 157 ~----~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~---------- 222 (265)
T cd06605 157 K----TFVGTSSYMAPERIQGNDYSVKSDIWSLGLSLIELATGRFPYPPENDPPDGIFELLQYIVNEPPP---------- 222 (265)
T ss_pred h----cccCChhccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCccccccccHHHHHHHHhcCCCC----------
Confidence 1 15578899999999888999999999999999999999999875432222222222211111000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+ ...++.++.++|.+||..+|++|||+.|+++
T Consensus 223 --~~~-~~~~~~~~~~li~~~l~~~p~~Rpt~~~ll~ 256 (265)
T cd06605 223 --RLP-SGKFSPDFQDFVNLCLIKDPRERPSYKELLE 256 (265)
T ss_pred --CCC-hhhcCHHHHHHHHHHcCCCchhCcCHHHHhh
Confidence 000 0114567889999999999999999999875
No 245
>KOG1024 consensus Receptor-like protein tyrosine kinase RYK/derailed [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-36 Score=298.41 Aligned_cols=266 Identities=20% Similarity=0.307 Sum_probs=223.2
Q ss_pred HHHHHhhccccccccCCCcceEEEEEEec------CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeec
Q 003855 495 DIQRATDEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCS 567 (791)
Q Consensus 495 ~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~ 567 (791)
+++....+++....+.+|.||.||.|.|. +.+.|-||.++... .-+...+.+|...+..+.|||+.++.+.+.
T Consensus 278 ~l~v~r~Rv~l~~llqEGtFGri~~gI~~eEdt~n~~q~v~vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~i 357 (563)
T KOG1024|consen 278 ELTVQRCRVRLSCLLQEGTFGRIYRGIWREEDTYNDCQEVLVKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSI 357 (563)
T ss_pred hhhhhhhheechhhhhcCchhheeeeeecccCCcchHHHHHHHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEe
Confidence 44555567888889999999999999664 34567777776544 334567888999999999999999999884
Q ss_pred -cCCeeeEEEecCCCCCHHHHHh-----h--CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC
Q 003855 568 -NPDFKALVLEFMPNGSLEKWLY-----S--HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM 639 (791)
Q Consensus 568 -~~~~~~lv~e~~~~g~L~~~l~-----~--~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~ 639 (791)
+.+.++..|.++.-|+|..|+. + ....+...+...++.|++.|++||| +.+|||.||.++|+++|+..
T Consensus 358 e~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aqtvtt~qlV~masQla~am~hlh----~~~ViHkDiAaRNCvIdd~L 433 (563)
T KOG1024|consen 358 EDYATPFVLYPATGVGNLKSFLQICRGDDPSYAQTVTTIQLVLMASQLAMAMEHLH----NHGVIHKDIAARNCVIDDQL 433 (563)
T ss_pred eccCcceEEEeccCcchHHHHHHHhccCCCccccchhHHHHHHHHHHHHHHHHHHH----hcCcccchhhhhcceehhhe
Confidence 5577889999999999999998 2 2334777888999999999999999 78999999999999999999
Q ss_pred cEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHH
Q 003855 640 AAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWV 718 (791)
Q Consensus 640 ~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~ 718 (791)
+|||+|-.++|.+.+++...-......+..||+||.+....|+..+|||||||++|||+| |+.||.+..+.|+.
T Consensus 434 qVkltDsaLSRDLFP~DYhcLGDnEnRPvkWMslEal~n~~yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~----- 508 (563)
T KOG1024|consen 434 QVKLTDSALSRDLFPGDYHCLGDNENRPVKWMSLEALQNSHYSSASDVWSFGVLLWELMTLGKLPYAEIDPFEME----- 508 (563)
T ss_pred eEEeccchhccccCcccccccCCCCCCcccccCHHHHhhhhhcchhhhHHHHHHHHHHHhcCCCCccccCHHHHH-----
Confidence 999999999999999888777777778899999999999999999999999999999999 99999875443321
Q ss_pred HHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHHh
Q 003855 719 KESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVKF 783 (791)
Q Consensus 719 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~~ 783 (791)
....++.+...+.+||.+++.+|.-||..+|++||+++|++.-|.++..+.
T Consensus 509 --------------~ylkdGyRlaQP~NCPDeLf~vMacCWallpeeRPsf~Qlv~cLseF~~ql 559 (563)
T KOG1024|consen 509 --------------HYLKDGYRLAQPFNCPDELFTVMACCWALLPEERPSFSQLVICLSEFHTQL 559 (563)
T ss_pred --------------HHHhccceecCCCCCcHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHH
Confidence 112223344556689999999999999999999999999999999987765
No 246
>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2
Probab=100.00 E-value=1.4e-35 Score=310.67 Aligned_cols=265 Identities=25% Similarity=0.313 Sum_probs=198.2
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (285)
T cd07861 1 DYTKIEKIGEGTYGVVYKGRNKKTGQIVAMKKIRLESEEEGVPSTAIREISLLKELQHPNIVCLQDVLMQESRLYLIFEF 80 (285)
T ss_pred CceEeeEecccCceEEEEEEECCCCcEEEEEEeccccccCCchHHHHHHHHHHHhcCCCCEeeeEEEEeeCCeEEEEEec
Confidence 4788899999999999999875 78999999886442 22345678899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 579 MPNGSLEKWLYSHN--YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 579 ~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
++ ++|.+++.... ..+++..+..++.|+++||.||| +.+++||||||+||++++++.++|+|||++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 155 (285)
T cd07861 81 LS-MDLKKYLDSLPKGQYMDAELVKSYLYQILQGILFCH----SRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPV 155 (285)
T ss_pred CC-CCHHHHHhcCCCCCcCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCc
Confidence 97 68999987432 45899999999999999999999 6789999999999999999999999999997654322
Q ss_pred CcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC---h---hhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG---L---TEV 729 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~---~~~ 729 (791)
.......++..|+|||++.+ ..++.++|||||||++|||+||+.||....... ............. . ...
T Consensus 156 --~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (285)
T cd07861 156 --RVYTHEVVTLWYRAPEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEID-QLFRIFRILGTPTEDVWPGVTSL 232 (285)
T ss_pred --ccccCCcccccccChHHhcCCCCcCcHHHHHHHHHHHHHHHHCCCCCCCCCHHH-HHHHHHHHhCCCChhhhhcchhh
Confidence 12223457889999998765 457889999999999999999999987532111 1111111100000 0 000
Q ss_pred cchh--hhh--hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 730 VDAN--LVR--EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 730 ~d~~--~~~--~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.+.. ... ..........++.++.+++.+|++.||++|||+.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~~ll~ 281 (285)
T cd07861 233 PDYKNTFPKWKKGSLRSAVKNLDEDGLDLLEKMLIYDPAKRISAKKALN 281 (285)
T ss_pred HHHHhhccccCcchhHHhcCCCCHHHHHHHHHHhcCChhhCCCHHHHhc
Confidence 0000 000 00000011135577889999999999999999999875
No 247
>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa
Probab=100.00 E-value=3.7e-35 Score=302.32 Aligned_cols=249 Identities=24% Similarity=0.316 Sum_probs=203.6
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|+..+.||+|+||.||.++.. +++.|++|.+.... ....+.+.+|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~~~e~ 80 (256)
T cd08221 1 HYIPIRVLGKGAFGEATLYRRTEDDSLVVWKEVNLTRLSEKERRDALNEIVILSLLQHPNIIAYYNHFMDDNTLLIEMEY 80 (256)
T ss_pred CceEeeEecccCCceEEEEEEcCCCcEEEEEEEeecccchhHHHHHHHHHHHHHhCCCCCeeEEEeEEecCCeEEEEEEe
Confidence 4788899999999999999854 68899999876542 44556788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+++|+|.+++... ...+++..+..++.|++.|++||| +.+++||||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~ 156 (256)
T cd08221 81 ANGGTLYDKIVRQKGQLFEEEMVLWYLFQIVSAVSYIH----KAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYS 156 (256)
T ss_pred cCCCcHHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----hCCccccCCChHhEEEeCCCCEEECcCcceEEcccccc
Confidence 9999999999865 445899999999999999999999 67899999999999999999999999999987644331
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
......++..|+|||...+..++.++||||||+++|||++|+.||+.... ...+..........
T Consensus 157 --~~~~~~~~~~y~ape~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~~--------- 220 (256)
T cd08221 157 --MAETVVGTPYYMSPELCQGVKYNFKSDIWALGCVLYELLTLKRTFDATNP-----LNLVVKIVQGNYTP--------- 220 (256)
T ss_pred --cccccCCCccccCHhhcCCCCCCCcchhHHHHHHHHHHHHCCCCCCCCCH-----HHHHHHHHcCCCCC---------
Confidence 22334688999999999888899999999999999999999999865221 11111111111000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
....++.++.+++.+||+.+|++||++.|+++.
T Consensus 221 -----~~~~~~~~~~~~i~~~l~~~p~~R~s~~~ll~~ 253 (256)
T cd08221 221 -----VVSVYSSELISLVHSLLQQDPEKRPTADEVLDQ 253 (256)
T ss_pred -----CccccCHHHHHHHHHHcccCcccCCCHHHHhhC
Confidence 012345668899999999999999999999875
No 248
>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1. Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25
Probab=100.00 E-value=8.3e-36 Score=310.93 Aligned_cols=247 Identities=23% Similarity=0.344 Sum_probs=200.8
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+.|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+..|+.++++++||||+++++++......++||||
T Consensus 4 ~~y~~~~~l~~g~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06642 4 ELFTKLERIGKGSFGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSYLKGTKLWIIMEY 83 (277)
T ss_pred HHHHHHHHhcCCCCeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhcccccCCceEEEEEc
Confidence 34667788999999999999865 67899999886443 34456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++++|.+++... .+++..+..++.|+++|+.||| ..+++|+||+|+||++++++.++++|||++........
T Consensus 84 ~~~~~L~~~~~~~--~~~~~~~~~~~~~i~~~l~~lH----~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06642 84 LGGGSALDLLKPG--PLEETYIATILREILKGLDYLH----SERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred cCCCcHHHHhhcC--CCCHHHHHHHHHHHHHHHHHHh----cCCeeccCCChheEEEeCCCCEEEccccccccccCcch-
Confidence 9999999998754 3789999999999999999999 67899999999999999999999999999976543221
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
......++..|+|||++.+..++.++|||||||++|||++|+.|+......+. ..++.. .. .+.
T Consensus 157 -~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~~~~--~~~~~~----~~----~~~----- 220 (277)
T cd06642 157 -KRNTFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRV--LFLIPK----NS----PPT----- 220 (277)
T ss_pred -hhhcccCcccccCHHHhCcCCCchhhhHHHHHHHHHHHHhCCCCCcccchhhH--Hhhhhc----CC----CCC-----
Confidence 12223578899999999888899999999999999999999999865322211 111100 00 000
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
....++..+.+++.+|++.+|++||++.|+++
T Consensus 221 ----~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 252 (277)
T cd06642 221 ----LEGQYSKPFKEFVEACLNKDPRFRPTAKELLK 252 (277)
T ss_pred ----CCcccCHHHHHHHHHHccCCcccCcCHHHHHH
Confidence 01134466789999999999999999999997
No 249
>PHA03209 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=2.8e-35 Score=317.55 Aligned_cols=262 Identities=21% Similarity=0.236 Sum_probs=195.0
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
...+|++.+.||+|+||.||+|+.. +++.||+|+.... ....|+.++++++||||+++++++......++|||
T Consensus 64 ~~~~y~~~~~lg~G~~g~Vy~~~~~~~~~~valK~~~~~------~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 137 (357)
T PHA03209 64 ASLGYTVIKTLTPGSEGRVFVATKPGQPDPVVLKIGQKG------TTLIEAMLLQNVNHPSVIRMKDTLVSGAITCMVLP 137 (357)
T ss_pred hhcCcEEEEEecCCCCeEEEEEEECCCCceEEEEeCCcc------ccHHHHHHHHhCCCCCCcChhheEEeCCeeEEEEE
Confidence 3457999999999999999999975 5788999975432 23458999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|+ .|+|.+++......+++..+..++.||+.||.||| +.+|+||||||+||+++.++.+||+|||+++......
T Consensus 138 ~~-~~~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~- 211 (357)
T PHA03209 138 HY-SSDLYTYLTKRSRPLPIDQALIIEKQILEGLRYLH----AQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAP- 211 (357)
T ss_pred cc-CCcHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEecCccccccccCc-
Confidence 99 56999999877667999999999999999999999 6789999999999999999999999999997533221
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCC-CccccCc--------chHHHHHHHhc--CCCh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPT-DEMFTGE--------MSLRRWVKESL--PHGL 726 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~-~~~~~~~--------~~~~~~~~~~~--~~~~ 726 (791)
......||..|+|||++.+..++.++|||||||++|||+++..|+ ....... ..+.+.+.... +...
T Consensus 212 --~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvvl~ell~~~~~~f~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 289 (357)
T PHA03209 212 --AFLGLAGTVETNAPEVLARDKYNSKADIWSAGIVLFEMLAYPSTIFEDPPSTPEEYVKSCHSHLLKIISTLKVHPEEF 289 (357)
T ss_pred --ccccccccccccCCeecCCCCCCchhhHHHHHHHHHHHHHcCCccccCCCCcHHHHHHHHHHHHHHHHHHhccChhhc
Confidence 122346899999999999999999999999999999999965554 3211110 01111111100 0000
Q ss_pred hhhcchhhhhhH-------------HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 727 TEVVDANLVREE-------------QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 727 ~~~~d~~~~~~~-------------~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.......+.... ........++..+.++|.+||+.||++|||+.|+++
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rpta~e~l~ 350 (357)
T PHA03209 290 PRDPGSRLVRGFIEYASLERQPYTRYPCFQRVNLPIDGEFLVHKMLTFDAAMRPSAEEILN 350 (357)
T ss_pred CCCCccHHHHHHHhhcccCCCcccccHHHhccCCCchHHHHHHHHHcCCcccCcCHHHHhc
Confidence 000000000000 000011134456678999999999999999999975
No 250
>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok
Probab=100.00 E-value=1.7e-35 Score=319.88 Aligned_cols=265 Identities=22% Similarity=0.235 Sum_probs=196.8
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccC------
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP------ 569 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 569 (791)
..++|+..+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 15 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~ 94 (355)
T cd07874 15 VLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQKSLEEF 94 (355)
T ss_pred hhhceeEEEEeeecCCEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeecccccccc
Confidence 4578999999999999999999864 68899999986532 33446677899999999999999999987543
Q ss_pred CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
...++||||+++ ++.+++.. .+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 95 ~~~~lv~e~~~~-~l~~~~~~---~l~~~~~~~~~~qi~~aL~~LH----~~givHrDikp~Nill~~~~~~kl~Dfg~~ 166 (355)
T cd07874 95 QDVYLVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 166 (355)
T ss_pred ceeEEEhhhhcc-cHHHHHhh---cCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHHEEECCCCCEEEeeCccc
Confidence 357899999965 77777753 3788899999999999999999 679999999999999999999999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC----
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG---- 725 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---- 725 (791)
+...... ......||..|+|||++.+..++.++|||||||++|||++|+.||.+....+ .+...+.......
T Consensus 167 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~~~~~~~~~~~~~~ 242 (355)
T cd07874 167 RTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHKILFPGRDYID-QWNKVIEQLGTPCPEFM 242 (355)
T ss_pred ccCCCcc---ccCCccccCCccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHHhCCCCHHHH
Confidence 8654321 2223468999999999988899999999999999999999999997532111 1111111100000
Q ss_pred ------hhhhcch----------hh-hhhH--HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 726 ------LTEVVDA----------NL-VREE--QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 726 ------~~~~~d~----------~~-~~~~--~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
....++. .. .... ...........++.+++.+|++.||++|||+.|+++.
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~mL~~dP~~Rps~~ell~h 311 (355)
T cd07874 243 KKLQPTVRNYVENRPKYAGLTFPKLFPDSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDEALQH 311 (355)
T ss_pred HhhcHHHHHHHhcCCccccccchhhccccccccccccccccchHHHHHHHHHhcCCchhcCCHHHHhcC
Confidence 0000000 00 0000 0000011124567899999999999999999999874
No 251
>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p
Probab=100.00 E-value=1.6e-35 Score=315.25 Aligned_cols=195 Identities=23% Similarity=0.300 Sum_probs=159.8
Q ss_pred ccccCCCcceEEEEEEec---CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeecc--CCeeeEEEecCC
Q 003855 506 CNLLGTGSFGSVYKGTIS---DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSN--PDFKALVLEFMP 580 (791)
Q Consensus 506 ~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~e~~~ 580 (791)
.++||+|+||+||+|+.. +++.||+|.+.... ....+.+|+.++++++||||+++++++.. ....++||||+.
T Consensus 6 ~~~lG~G~~g~Vy~~~~~~~~~~~~~aiK~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07868 6 GCKVGRGTYGHVYKAKRKDGKDDRDYALKQIEGTG--ISMSACREIALLRELKHPNVISLQKVFLSHADRKVWLLFDYAE 83 (317)
T ss_pred ccccccCCCeEEEEEEEccCCCCceEEEEEECCCC--CcHHHHHHHHHHHhcCCCCCcceeeeEecCCCcEEEEEEeccC
Confidence 468999999999999864 56789999886442 22456789999999999999999998854 456789999995
Q ss_pred CCCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEe----CCCCcEEEeeecc
Q 003855 581 NGSLEKWLYSH--------NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILL----DENMAAHVSDFGI 648 (791)
Q Consensus 581 ~g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill----~~~~~~kl~Dfgl 648 (791)
++|.+++... ...+++..+..++.||+.||.||| +.+|+||||||+|||+ +.++.+||+|||+
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~al~~LH----~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07868 84 -HDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred -CCHHHHHHhcccccccCCcccCCHHHHHHHHHHHHHHHHHHH----hCCEEcCCCCHHHEEEecCCCCcCcEEEeecCc
Confidence 5898887632 224888999999999999999999 6789999999999999 4668899999999
Q ss_pred ccccCCCCCc-ceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCcc
Q 003855 649 SKLLGEGEDS-VTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEM 707 (791)
Q Consensus 649 a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~ 707 (791)
|+.+...... .......||+.|+|||++.+ ..++.++||||+||++|||++|+.||...
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~ 219 (317)
T cd07868 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCR 219 (317)
T ss_pred eeccCCCCccccccCCccccccccCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCC
Confidence 9876433221 12233568999999998866 45899999999999999999999999653
No 252
>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also
Probab=100.00 E-value=1.1e-35 Score=311.40 Aligned_cols=266 Identities=22% Similarity=0.295 Sum_probs=198.9
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|+..+.||+|+||.||+|+.. +|+.||+|++.... ......+.+|++++++++||||+++++++.+....++|+||
T Consensus 1 ~y~~~~~l~~g~~~~vy~~~~~~~g~~~~~k~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 80 (284)
T cd07839 1 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLYDVLHSDKKLTLVFEY 80 (284)
T ss_pred CceeEEEecccCCeEEEEEEECCCCcEEEEEEeecccccccCccchhHHHHHHHhcCCCCeeeHHHHhccCCceEEEEec
Confidence 4778899999999999999975 78999999986542 22235677899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++ ++|.+++......+++..+..++.||++||.||| ..+++||||||+||+++.++.+||+|||+++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH----~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~- 154 (284)
T cd07839 81 CD-QDLKKYFDSCNGDIDPEIVKSFMFQLLKGLAFCH----SHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVR- 154 (284)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCC-
Confidence 96 5899988765556899999999999999999999 67899999999999999999999999999986543221
Q ss_pred ceeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC------hhhhcc
Q 003855 659 VTQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG------LTEVVD 731 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~------~~~~~d 731 (791)
......++..|+|||++.+. .++.++|||||||++|||+||+.|+......+..+........... .....+
T Consensus 155 -~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (284)
T cd07839 155 -CYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWPGVSKLPD 233 (284)
T ss_pred -CcCCCccccCCcChHHHhCCcccCcHHHHHHHHHHHHHHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHhHHhhhccc
Confidence 12234578899999987654 4789999999999999999999886432222222211111100000 000000
Q ss_pred hh----hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 AN----LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 ~~----~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.. ......-......++.++.+++.+||+.||++|||+.|+++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~il~ 280 (284)
T cd07839 234 YKPYPMYPATTSLVNVVPKLNSTGRDLLQNLLVCNPVQRISAEEALQ 280 (284)
T ss_pred ccccCCCCCcchhhhhcccCCHHHHHHHHHHhcCChhhcCCHHHHhc
Confidence 00 00000000111234567889999999999999999999975
No 253
>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate
Probab=100.00 E-value=1.4e-35 Score=307.59 Aligned_cols=249 Identities=27% Similarity=0.403 Sum_probs=199.2
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---------hHHHHHHHHHHHHHHhccCCccceeeeeeccCCe
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---------ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDF 571 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 571 (791)
+|.+.+.||+|+||.||+|... +++.||+|.+.... .+..+.+..|+.++++++||||+++++++.+.+.
T Consensus 1 ~~~~~~~ig~g~~~~v~~a~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~ 80 (267)
T cd06628 1 KWIKGALIGSGSFGSVYLGMNASSGELMAVKQVELPSVSASSKDRKRSMLDALAREIALLKELQHENIVQYLGSSLDADH 80 (267)
T ss_pred CccccceeecCCCeEEEEEEecCCCcEEEEEEecCCCcccchhHHHHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEeCCc
Confidence 3677889999999999999864 68899999885432 1234678899999999999999999999999999
Q ss_pred eeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 572 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
.++||||+++++|.+++.... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||.++.
T Consensus 81 ~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~~l~~~l~~lH----~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~ 155 (267)
T cd06628 81 LNIFLEYVPGGSVAALLNNYG-AFEETLVRNFVRQILKGLNYLH----NRGIIHRDIKGANILVDNKGGIKISDFGISKK 155 (267)
T ss_pred cEEEEEecCCCCHHHHHHhcc-CccHHHHHHHHHHHHHHHHHHH----hcCcccccCCHHHEEEcCCCCEEecccCCCcc
Confidence 999999999999999998654 4788899999999999999999 67899999999999999999999999999987
Q ss_pred cCCCCCc----ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChh
Q 003855 652 LGEGEDS----VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLT 727 (791)
Q Consensus 652 ~~~~~~~----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (791)
....... .......|+..|+|||.+.+..++.++||||+||++|||++|+.||....... ...+ +.. .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~-~~~----~-- 227 (267)
T cd06628 156 LEANSLSTKTNGARPSLQGSVFWMAPEVVKQTSYTRKADIWSLGCLVVEMLTGKHPFPDCTQLQ-AIFK-IGE----N-- 227 (267)
T ss_pred cccccccCCccccccccCCCcCccChhHhccCCCCchhhhHHHHHHHHHHhhCCCCCCCccHHH-HHHH-Hhc----c--
Confidence 6532111 11122347889999999988889999999999999999999999997532111 1100 000 0
Q ss_pred hhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 728 EVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 728 ~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+. .+..++..+.+++.+||+.||++||++.|+++
T Consensus 228 --~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 263 (267)
T cd06628 228 --ASPE---------IPSNISSEAIDFLEKTFEIDHNKRPTAAELLK 263 (267)
T ss_pred --CCCc---------CCcccCHHHHHHHHHHccCCchhCcCHHHHhh
Confidence 0000 11134566789999999999999999999976
No 254
>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2. Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage
Probab=100.00 E-value=4.5e-35 Score=303.68 Aligned_cols=251 Identities=20% Similarity=0.320 Sum_probs=186.6
Q ss_pred ccCCCcceEEEEEEecCC---cEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCC
Q 003855 508 LLGTGSFGSVYKGTISDG---TDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGS 583 (791)
Q Consensus 508 ~ig~G~~g~Vy~~~~~~~---~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~ 583 (791)
.||+|+||.||+|...++ ..+++|.+.... ....+.+.+|+.+++.++||||+++++++.+....++||||+++|+
T Consensus 2 ~lg~G~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~ 81 (268)
T cd05086 2 EIGNGWFGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQCVEAIPYLLVFEYCELGD 81 (268)
T ss_pred cCCCCcCceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEecCCCccEEEEecCCCCc
Confidence 699999999999975433 345677665432 3445688999999999999999999999999999999999999999
Q ss_pred HHHHHhhCC---CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 584 LEKWLYSHN---YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 584 L~~~l~~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
|.++++... ...++..+..++.||++||+||| +.+++||||||+||+++.++.++|+|||++...........
T Consensus 82 L~~~l~~~~~~~~~~~~~~~~~~~~~i~~al~~lH----~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~ 157 (268)
T cd05086 82 LKSYLSQEQWHRRNSQLLLLQRMACEIAAGVTHMH----KHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIET 157 (268)
T ss_pred HHHHHHhhhcccccccHHHHHHHHHHHHHHHHHHH----HCCeeccCCccceEEEcCCccEEecccccccccCcchhhhc
Confidence 999998542 23567778899999999999999 67899999999999999999999999999864322211112
Q ss_pred eecccccccccCCCccCC-------CCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcch
Q 003855 661 QTMTMATIGYMAPEYGSE-------GIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~-------~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
.....++..|+|||+... ..++.++|||||||++|||++ |..||...... ..+..... .......++
T Consensus 158 ~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~-~~~~~~~~----~~~~~~~~~ 232 (268)
T cd05086 158 EDDKCVPLRWLAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDR-EVLNHVIK----DQQVKLFKP 232 (268)
T ss_pred ccCCcCcccccCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHH-HHHHHHHh----hcccccCCC
Confidence 233457889999998643 345789999999999999997 56677543211 11111111 111111111
Q ss_pred hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 733 NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
.+. ......+.+++..|| .+|++||++.||++.|.
T Consensus 233 ~~~---------~~~~~~~~~l~~~c~-~~P~~Rp~~~~i~~~l~ 267 (268)
T cd05086 233 QLE---------LPYSERWYEVLQFCW-LSPEKRATAEEVHRLLT 267 (268)
T ss_pred ccC---------CCCcHHHHHHHHHHh-hCcccCCCHHHHHHHhc
Confidence 111 113355778999999 67999999999998874
No 255
>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=4e-35 Score=307.41 Aligned_cols=251 Identities=25% Similarity=0.345 Sum_probs=199.2
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|++.+.||+|+||.||+|+.+ +++.||+|.+.... ......+.+|+.++++++||||+++++++......++||||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (286)
T cd06622 1 DEIEVLDELGKGNYGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAFFIEGAVYMCMEY 80 (286)
T ss_pred ChhhhhhhhcccCCeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhheecCCeEEEEEee
Confidence 46888999999999999999976 78999999886542 33456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 579 MPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 579 ~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
+++++|.+++... ...+++..+..++.+++.|+.|||+ ..+++||||||+||+++.++.++|+|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~LH~---~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~ 157 (286)
T cd06622 81 MDAGSLDKLYAGGVATEGIPEDVLRRITYAVVKGLKFLKE---EHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASL 157 (286)
T ss_pred cCCCCHHHHHHhccccCCCCHHHHHHHHHHHHHHHHHHHh---cCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCc
Confidence 9999999998764 2358999999999999999999994 3589999999999999999999999999997653221
Q ss_pred CcceeecccccccccCCCccCCC------CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEG------IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~------~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
.....++..|+|||.+.+. .++.++|||||||++|||++|+.||....... .... +.. ..
T Consensus 158 ----~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~-~~~~-~~~--------~~ 223 (286)
T cd06622 158 ----AKTNIGCQSYMAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYAN-IFAQ-LSA--------IV 223 (286)
T ss_pred ----cccCCCccCccCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhh-HHHH-HHH--------Hh
Confidence 1223578899999987543 35889999999999999999999986422111 0000 000 00
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.. ....+..++.++.+++.+|++.+|++||++.++++
T Consensus 224 ~~~------~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~ 261 (286)
T cd06622 224 DGD------PPTLPSGYSDDAQDFVAKCLNKIPNRRPTYAQLLE 261 (286)
T ss_pred hcC------CCCCCcccCHHHHHHHHHHcccCcccCCCHHHHhc
Confidence 000 00011135567789999999999999999999987
No 256
>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha. Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype
Probab=100.00 E-value=1.4e-35 Score=316.63 Aligned_cols=265 Identities=19% Similarity=0.250 Sum_probs=195.6
Q ss_pred cccccCCC--cceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 505 ECNLLGTG--SFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 505 ~~~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
+.++||+| +|++||+++.+ +|+.||+|++.... ....+.+.+|+.+++.++||||+++++++..++..++||||+
T Consensus 2 ~~~~ig~G~~~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~hpniv~~~~~~~~~~~~~lv~e~~ 81 (327)
T cd08227 2 LLTVIGRGFEDLMTVNLARYKPTGEYVTVRRINLEACTNEMVTFLQGELHVSKLFNHPNIVPYRATFIADNELWVVTSFM 81 (327)
T ss_pred hhhhccccccceEEEEEEeecccCcEEEEEEechhhccHHHHHHHHHHHHHHHhcCCCCeeeEEEEEEECCEEEEEEecc
Confidence 45689999 67899999864 78999999987543 334456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++|+|.+++... ...+++..+..++.|++.||+||| +.+|+||||||+||+++.++.++++||+.+.........
T Consensus 82 ~~~~l~~~~~~~~~~~l~~~~~~~i~~qi~~~L~~LH----~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~ 157 (327)
T cd08227 82 AYGSAKDLICTHFMDGMSELAIAYILQGVLKALDYIH----HMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQR 157 (327)
T ss_pred CCCcHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCChhhEEEecCCcEEEcccchhhcccccccc
Confidence 999999999754 334899999999999999999999 678999999999999999999999999876443221110
Q ss_pred c-----eeecccccccccCCCccCC--CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChh----
Q 003855 659 V-----TQTMTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLT---- 727 (791)
Q Consensus 659 ~-----~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~---- 727 (791)
. ......++..|+|||++.+ ..++.++|||||||++|||++|+.||........ .........+....
T Consensus 158 ~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~-~~~~~~~~~~~~~~~~~~ 236 (327)
T cd08227 158 LRVVHDFPKYSVKVLPWLSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQM-LLEKLNGTVPCLLDTTTI 236 (327)
T ss_pred ccccccccccccceecccChHHhhcccCCCCchhhHHHHHHHHHHHHHCCCCCCCcchhHH-HHHHhcCCccccccccch
Confidence 0 1112346778999999865 4589999999999999999999999975322111 11111111110000
Q ss_pred --hh---------cchhhhh----------h--HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 728 --EV---------VDANLVR----------E--EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 728 --~~---------~d~~~~~----------~--~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+. .+..... . ....+....+++.+.+++.+||+.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~ell~ 306 (327)
T cd08227 237 PAEELTMKPSRSGANSGLGESTTVSTPRPSNGESSSHPYNRTFSPHFHHFVEQCLQRNPDARPSASTLLN 306 (327)
T ss_pred hhhhcccCCcccCCcCCCCcccccCCcCccccCCcccccccccCHHHHHHHHHHHhhCchhcCCHHHHhc
Confidence 00 0000000 0 0000111234567899999999999999999999986
No 257
>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn
Probab=100.00 E-value=2e-35 Score=320.38 Aligned_cols=265 Identities=20% Similarity=0.206 Sum_probs=197.4
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccC------
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP------ 569 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 569 (791)
..++|+..+.||+|+||.||+|... .++.||||++.... ....+.+.+|+.+++.++||||+++++++...
T Consensus 22 ~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~~~~~~~ 101 (364)
T cd07875 22 VLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEF 101 (364)
T ss_pred hhcceeEEEEeecCCCeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccccccccc
Confidence 4578999999999999999999864 68899999986532 33445678899999999999999999987543
Q ss_pred CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
...++||||+++ ++.+++.. .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 102 ~~~~lv~e~~~~-~l~~~~~~---~~~~~~~~~~~~qi~~aL~~LH----~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a 173 (364)
T cd07875 102 QDVYIVMELMDA-NLCQVIQM---ELDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173 (364)
T ss_pred CeEEEEEeCCCC-CHHHHHHh---cCCHHHHHHHHHHHHHHHHHHh----hCCeecCCCCHHHEEECCCCcEEEEeCCCc
Confidence 357999999964 78887753 2788899999999999999999 679999999999999999999999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC--hh
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG--LT 727 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~ 727 (791)
+...... ......+|..|+|||++.+..++.++|||||||++|||++|+.||...... ..+...+....... ..
T Consensus 174 ~~~~~~~---~~~~~~~t~~y~aPE~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~~ 249 (364)
T cd07875 174 RTAGTSF---MMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHI-DQWNKVIEQLGTPCPEFM 249 (364)
T ss_pred cccCCCC---cccCCcccCCcCCHHHHhCCCCCchhhHHhHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHHH
Confidence 8654321 122346899999999999999999999999999999999999999753221 11111111100000 00
Q ss_pred hhcchhhhhhHH---------------------hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 728 EVVDANLVREEQ---------------------AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 728 ~~~d~~~~~~~~---------------------~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..+.+....... ..........++.+++.+|++.||++|||+.|+++.
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dll~~mL~~dP~~R~t~~e~L~h 318 (364)
T cd07875 250 KKLQPTVRTYVENRPKYAGYSFEKLFPDVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQH 318 (364)
T ss_pred HhhhHHHHHHHhhCCCcCCCChHhhCccccccccccccccccHHHHHHHHHhcCcCcccCCCHHHHhcC
Confidence 000000000000 000001123567899999999999999999999873
No 258
>PTZ00284 protein kinase; Provisional
Probab=100.00 E-value=2e-35 Score=330.19 Aligned_cols=266 Identities=23% Similarity=0.264 Sum_probs=192.9
Q ss_pred HHHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccC------Cccceeeeeecc
Q 003855 496 IQRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRH------RNLIKILSSCSN 568 (791)
Q Consensus 496 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h------~niv~l~~~~~~ 568 (791)
+....++|++.+.||+|+||.||+|... +++.||||+++... ...+.+..|+.+++.++| ++++++++++..
T Consensus 124 ~~~~~~~y~i~~~lG~G~fg~V~~a~~~~~~~~vAvK~i~~~~-~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~~ 202 (467)
T PTZ00284 124 IDVSTQRFKILSLLGEGTFGKVVEAWDRKRKEYCAVKIVRNVP-KYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQN 202 (467)
T ss_pred cccCCCcEEEEEEEEeccCEEEEEEEEcCCCeEEEEEEEecch-hhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEEc
Confidence 3345688999999999999999999864 68889999986432 223445667777777754 458888888865
Q ss_pred C-CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC--------
Q 003855 569 P-DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM-------- 639 (791)
Q Consensus 569 ~-~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~-------- 639 (791)
. .+.++|||++ +++|.+++...+ .+++..+..++.||+.||+|||+ ..+|+||||||+|||++.++
T Consensus 203 ~~~~~~iv~~~~-g~~l~~~l~~~~-~l~~~~~~~i~~qi~~aL~yLH~---~~gIiHrDlKP~NILl~~~~~~~~~~~~ 277 (467)
T PTZ00284 203 ETGHMCIVMPKY-GPCLLDWIMKHG-PFSHRHLAQIIFQTGVALDYFHT---ELHLMHTDLKPENILMETSDTVVDPVTN 277 (467)
T ss_pred CCceEEEEEecc-CCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHHh---cCCeecCCCCHHHEEEecCCcccccccc
Confidence 4 5788999988 789999987654 48999999999999999999993 25899999999999998765
Q ss_pred --------cEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCc
Q 003855 640 --------AAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE 711 (791)
Q Consensus 640 --------~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~ 711 (791)
.+||+|||.+..... .....+||+.|+|||++.+..++.++|||||||++|||++|+.||+.....
T Consensus 278 ~~~~~~~~~vkl~DfG~~~~~~~-----~~~~~~gt~~Y~APE~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~- 351 (467)
T PTZ00284 278 RALPPDPCRVRICDLGGCCDERH-----SRTAIVSTRHYRSPEVVLGLGWMYSTDMWSMGCIIYELYTGKLLYDTHDNL- 351 (467)
T ss_pred cccCCCCceEEECCCCccccCcc-----ccccccCCccccCcHHhhcCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChH-
Confidence 499999998864322 223457899999999999999999999999999999999999999763221
Q ss_pred chHHHHHHHhc---CCCh---------hhhc----------chhhhhhHH--hhHHHHHHHHHHHHHHhhccccCCCCCC
Q 003855 712 MSLRRWVKESL---PHGL---------TEVV----------DANLVREEQ--AFSAKMDCILSIMDLALDCCIESPDMRI 767 (791)
Q Consensus 712 ~~~~~~~~~~~---~~~~---------~~~~----------d~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~P~~RP 767 (791)
.....+.... +..+ .++. ++....... ...........+.+|+.+||+.||++||
T Consensus 352 -~~~~~i~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dli~~mL~~dP~~R~ 430 (467)
T PTZ00284 352 -EHLHLMEKTLGRLPSEWAGRCGTEEARLLYNSAGQLRPCTDPKHLARIARARPVREVIRDDLLCDLIYGLLHYDRQKRL 430 (467)
T ss_pred -HHHHHHHHHcCCCCHHHHhhccchhHHHHhhhcccccccCCHHHHHhhhcccchhhhhchHHHHHHHHHhCCcChhhCC
Confidence 1111111110 0000 0000 000000000 0000001235578999999999999999
Q ss_pred CHHHHHH
Q 003855 768 NVTDAAA 774 (791)
Q Consensus 768 t~~ev~~ 774 (791)
|+.|+++
T Consensus 431 ta~e~L~ 437 (467)
T PTZ00284 431 NARQMTT 437 (467)
T ss_pred CHHHHhc
Confidence 9999986
No 259
>PTZ00266 NIMA-related protein kinase; Provisional
Probab=100.00 E-value=7.7e-36 Score=341.56 Aligned_cols=256 Identities=21% Similarity=0.287 Sum_probs=198.0
Q ss_pred HHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehh--hhHHHHHHHHHHHHHHhccCCccceeeeeecc--CCe
Q 003855 497 QRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSCSN--PDF 571 (791)
Q Consensus 497 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~ 571 (791)
....++|++.+.||+|+||.||+|+.. ++..||+|++... .......+..|+.++++++||||+++++++.+ ...
T Consensus 9 e~~l~~YeIl~kLG~GgFGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~de~~~~ 88 (1021)
T PTZ00266 9 ESRLNEYEVIKKIGNGRFGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLNKANQK 88 (1021)
T ss_pred ccccCCEEEEEEEecCCCeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEecCCCE
Confidence 334578999999999999999999975 6778999988643 23445678899999999999999999998854 456
Q ss_pred eeEEEecCCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccC---CCCCeEecCCCCCCeEeCC--------
Q 003855 572 KALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLHHGH---SSAPIIHCDLKPTNILLDE-------- 637 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~---~~~~i~H~dlk~~Nill~~-------- 637 (791)
.++||||+++|+|.++|... ...+++..++.|+.||+.||+|||... ...+|+||||||+|||++.
T Consensus 89 lyIVMEY~~gGSL~~lL~k~~~~~g~L~E~~Il~Ia~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i 168 (1021)
T PTZ00266 89 LYILMEFCDAGDLSRNIQKCYKMFGKIEEHAIVDITRQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKI 168 (1021)
T ss_pred EEEEEeCCCCCcHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccc
Confidence 89999999999999999742 245899999999999999999999422 1146999999999999964
Q ss_pred ---------CCcEEEeeeccccccCCCCCcceeecccccccccCCCccCC--CCCCccccHHhHHHHHHHHHhCCCCCCc
Q 003855 638 ---------NMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTRKRPTDE 706 (791)
Q Consensus 638 ---------~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~ 706 (791)
.+.+||+|||+++.+..... .....||+.|+|||++.+ ..++.++||||||||+|||+||+.||..
T Consensus 169 ~~~~~n~ng~~iVKLsDFGlAr~l~~~s~---~~s~vGTp~YmAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~ 245 (1021)
T PTZ00266 169 TAQANNLNGRPIAKIGDFGLSKNIGIESM---AHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHK 245 (1021)
T ss_pred cccccccCCCCceEEccCCcccccccccc---ccccCCCccccCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCc
Confidence 34589999999987643221 223468999999998753 4588999999999999999999999964
Q ss_pred cccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 707 MFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 707 ~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.. ....++.... ... . .....++..+.++|..||+.+|++||++.|+++
T Consensus 246 ~~----~~~qli~~lk-~~p------~--------lpi~~~S~eL~dLI~~~L~~dPeeRPSa~QlL~ 294 (1021)
T PTZ00266 246 AN----NFSQLISELK-RGP------D--------LPIKGKSKELNILIKNLLNLSAKERPSALQCLG 294 (1021)
T ss_pred CC----cHHHHHHHHh-cCC------C--------CCcCCCCHHHHHHHHHHhcCChhHCcCHHHHhc
Confidence 22 1112111110 000 0 000123466889999999999999999999984
No 260
>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte
Probab=100.00 E-value=2.6e-35 Score=306.41 Aligned_cols=254 Identities=26% Similarity=0.378 Sum_probs=198.9
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh----------hHHHHHHHHHHHHHHhccCCccceeeeeeccCC
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL----------ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPD 570 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~----------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~ 570 (791)
+|...+.||+|+||.||+|... +++.||+|.+.... ....+.+..|+.++++++|||++++++++...+
T Consensus 2 ~~~~~~~lg~g~~~~vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~ 81 (272)
T cd06629 2 KWVKGELIGKGTYGRVYLALNVTTGEMMAVKQVELPATIAGRHDSRQKDMVKALRSEIETLKDLDHLNIVQYLGFETTEE 81 (272)
T ss_pred ceeecceecccCceEEEEEeecCCCceeeeeeeechhhhhcccchHHHHHHHHHHHHHHHHHhcCCCCcceEEEEeccCC
Confidence 4677889999999999999864 68999999875321 112356788999999999999999999999999
Q ss_pred eeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccc
Q 003855 571 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISK 650 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 650 (791)
..++||||+++|+|.+++.... .+++..+..++.|++.|+.||| +.+++||||+|+||++++++.++++|||+++
T Consensus 82 ~~~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~ 156 (272)
T cd06629 82 YLSIFLEYVPGGSIGSCLRTYG-RFEEQLVRFFTEQVLEGLAYLH----SKGILHRDLKADNLLVDADGICKISDFGISK 156 (272)
T ss_pred ceEEEEecCCCCcHHHHHhhcc-CCCHHHHHHHHHHHHHHHHHHh----hCCeeecCCChhhEEEcCCCeEEEeeccccc
Confidence 9999999999999999998764 4889999999999999999999 6789999999999999999999999999997
Q ss_pred ccCCCCCcceeecccccccccCCCccCCCC--CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhh
Q 003855 651 LLGEGEDSVTQTMTMATIGYMAPEYGSEGI--VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTE 728 (791)
Q Consensus 651 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (791)
...............++..|+|||...... ++.++||||||+++||+++|..||...... ..+... .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~----~~~~~~-~~~~~~~ 231 (272)
T cd06629 157 KSDDIYDNDQNMSMQGSVFWMAPEVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPWSDEEAI----AAMFKL-GNKRSAP 231 (272)
T ss_pred cccccccccccccccCCccccCHHHhccccCCCCccchhHHHHHHHHHHHhCCCCCcCcchH----HHHHHh-hccccCC
Confidence 654322222223345788999999876654 889999999999999999999998642211 111110 0000000
Q ss_pred hcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 729 VVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 729 ~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.+... ....++..+.+++.+|++.+|++||++.|+++
T Consensus 232 ~~~~~---------~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 268 (272)
T cd06629 232 PIPPD---------VSMNLSPVALDFLNACFTINPDNRPTARELLQ 268 (272)
T ss_pred cCCcc---------ccccCCHHHHHHHHHHhcCChhhCCCHHHHhh
Confidence 00000 01134577889999999999999999999986
No 261
>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4. Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s
Probab=100.00 E-value=1.4e-35 Score=308.99 Aligned_cols=254 Identities=23% Similarity=0.385 Sum_probs=203.0
Q ss_pred hccccccccCCCcceEEEEEEec------CCcEEEEEEeehhhhH-HHHHHHHHHHHHHhccCCccceeeeeeccCCeee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS------DGTDVAIKIFNLQLER-AFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~------~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 573 (791)
++|+..+.||+|+||.||+|+.+ +.+.|++|.+.....+ ..+.+..|++++++++||||+++++++.+.+..+
T Consensus 5 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~ 84 (275)
T cd05046 5 SNLQEITTLGRGEFGEVFLAKAKGIEEEGGETLVLVKALQKTKDENLQSEFRRELDMFRKLSHKNVVRLLGLCREAEPHY 84 (275)
T ss_pred HhceeeeeecccceeEEEEEEeccCCcCCCcceEEEEccCCccchHHHHHHHHHHHHHHhcCCcceeeeEEEECCCCcce
Confidence 57888999999999999999864 3467999988655433 5577899999999999999999999999989999
Q ss_pred EEEecCCCCCHHHHHhhCC--------CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEee
Q 003855 574 LVLEFMPNGSLEKWLYSHN--------YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSD 645 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~--------~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~D 645 (791)
+||||+++|+|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||++++++.++++|
T Consensus 85 lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH----~~~i~H~dlkp~Nili~~~~~~~l~~ 160 (275)
T cd05046 85 MILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVALCTQIALGMDHLS----NARFVHRDLAARNCLVSSQREVKVSL 160 (275)
T ss_pred EEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHHHHHHHHHHHHhh----hcCcccCcCccceEEEeCCCcEEEcc
Confidence 9999999999999998543 14899999999999999999999 67899999999999999999999999
Q ss_pred eccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCC
Q 003855 646 FGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPH 724 (791)
Q Consensus 646 fgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 724 (791)
||++....... ........++..|+|||...+..++.++||||||+++|||++ |..||..... ......... .
T Consensus 161 ~~~~~~~~~~~-~~~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~~~~~p~~~~~~--~~~~~~~~~---~ 234 (275)
T cd05046 161 LSLSKDVYNSE-YYKLRNALIPLRWLAPEAVQEDDFSTKSDVWSFGVLMWEVFTQGELPFYGLSD--EEVLNRLQA---G 234 (275)
T ss_pred cccccccCccc-ccccCCceeEEeecChhhhccCCCCchhhHHHHHHHHHHHHhCCCCCccccch--HHHHHHHHc---C
Confidence 99987543222 112223356778999999888889999999999999999999 7788854321 111111110 0
Q ss_pred ChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 725 GLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 725 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
... .+....++..+.+++.+||+.+|++||++.|+++.|.
T Consensus 235 ~~~-------------~~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~~l~~l~ 274 (275)
T cd05046 235 KLE-------------LPVPEGCPSRLYKLMTRCWAVNPKDRPSFSELVSALG 274 (275)
T ss_pred CcC-------------CCCCCCCCHHHHHHHHHHcCCCcccCCCHHHHHHHhc
Confidence 000 0011134567889999999999999999999999875
No 262
>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development
Probab=100.00 E-value=2.7e-35 Score=305.05 Aligned_cols=250 Identities=24% Similarity=0.317 Sum_probs=195.1
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehh-----hhHHHHHHHHHHHHHHhccCCccceeeeeecc--CCee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ-----LERAFRSFDSECEVLRNVRHRNLIKILSSCSN--PDFK 572 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~ 572 (791)
.+|+..+.||+|+||.||+|... +++.||+|++... ..+..+.+.+|+.++++++||||+++++++.+ ....
T Consensus 2 ~~~~~~~~lg~g~~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (266)
T cd06651 2 INWRRGKLLGQGAFGRVYLCYDVDTGRELAAKQVQFDPESPETSKEVSALECEIQLLKNLQHERIVQYYGCLRDRAEKTL 81 (266)
T ss_pred CCccccceecCCCCEEEEEEEEcCCCcEEEEEEeecCcCCchhHHHHHHHHHHHHHHHHcCCCCeeeEEEEEEcCCCCEE
Confidence 46888999999999999999864 6899999987533 12345678889999999999999999998865 3567
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++++||+++++|.+++..... +++..+..++.|++.||+||| +.+++||||+|+||++++++.++|+|||+++..
T Consensus 82 ~l~~e~~~~~~L~~~l~~~~~-l~~~~~~~~~~qi~~~l~~LH----~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~ 156 (266)
T cd06651 82 TIFMEYMPGGSVKDQLKAYGA-LTESVTRKYTRQILEGMSYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRL 156 (266)
T ss_pred EEEEeCCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEccCCCcccc
Confidence 899999999999999986543 788999999999999999999 678999999999999999999999999999865
Q ss_pred CCCCCc-ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 653 GEGEDS-VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 653 ~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
...... .......++..|+|||++.+..++.++|||||||++|||++|+.||......+ . +........ .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~i~~el~~g~~pf~~~~~~~----~-~~~~~~~~~----~ 227 (266)
T cd06651 157 QTICMSGTGIRSVTGTPYWMSPEVISGEGYGRKADVWSLGCTVVEMLTEKPPWAEYEAMA----A-IFKIATQPT----N 227 (266)
T ss_pred ccccccCCccccCCccccccCHHHhCCCCCCchhhhHHHHHHHHHHHHCCCCccccchHH----H-HHHHhcCCC----C
Confidence 432111 11122357889999999988889999999999999999999999987532111 1 111000000 0
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.+ +..+...+.+++ +||..+|++||+++|+++
T Consensus 228 ~~~---------~~~~~~~~~~li-~~~~~~p~~Rp~~~eil~ 260 (266)
T cd06651 228 PQL---------PSHISEHARDFL-GCIFVEARHRPSAEELLR 260 (266)
T ss_pred CCC---------chhcCHHHHHHH-HHhcCChhhCcCHHHHhc
Confidence 000 112334556677 788899999999999975
No 263
>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou
Probab=100.00 E-value=2.2e-35 Score=309.79 Aligned_cols=262 Identities=24% Similarity=0.294 Sum_probs=193.2
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhc---cCCccceeeeeecc-----CC
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNV---RHRNLIKILSSCSN-----PD 570 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~-----~~ 570 (791)
+|++.+.||+|+||.||+|+.. +++.||+|.+.... ......+.+|+.+++.+ +||||+++++++.. ..
T Consensus 1 ~y~~~~~lg~g~~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~~~~~~~ 80 (288)
T cd07863 1 QYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATSRTDRET 80 (288)
T ss_pred CceEeeEEeecCCeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccccCCCCc
Confidence 4788899999999999999865 78999999886532 11223455667666655 79999999998754 34
Q ss_pred eeeEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 571 FKALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
..++||||++ ++|.+++.... ..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||++
T Consensus 81 ~~~lv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dikp~Nili~~~~~~kl~dfg~~ 155 (288)
T cd07863 81 KVTLVFEHVD-QDLRTYLDKVPPPGLPAETIKDLMRQFLRGLDFLH----ANCIVHRDLKPENILVTSGGQVKLADFGLA 155 (288)
T ss_pred eEEEEEcccc-cCHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECccCcc
Confidence 5789999997 58999887543 34899999999999999999999 678999999999999999999999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcC---CCh
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP---HGL 726 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~ 726 (791)
+....... .....++..|+|||++.+..++.++||||+||++|||++|++||...... ..+.+....... ..+
T Consensus 156 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DiwslG~~l~~l~~g~~~f~~~~~~-~~~~~~~~~~~~~~~~~~ 231 (288)
T cd07863 156 RIYSCQMA---LTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEA-DQLGKIFDLIGLPPEDDW 231 (288)
T ss_pred ccccCccc---CCCccccccccCchHhhCCCCCCcchhhhHHHHHHHHHhCCcCcCCCCHH-HHHHHHHHHhCCCChhhC
Confidence 87643221 22345789999999998888999999999999999999999998653221 112221111100 000
Q ss_pred h-------hhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 727 T-------EVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 727 ~-------~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
. ....+...... ......++.++.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~L~~dP~~R~t~~~~l~ 284 (288)
T cd07863 232 PRDVTLPRGAFSPRGPRPV--QSVVPEIEESGAQLLLEMLTFNPHKRISAFRALQ 284 (288)
T ss_pred cccccccccccCCCCCCch--HHhCcCcCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 0 00000000000 0011134567889999999999999999999875
No 264
>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess
Probab=100.00 E-value=2.4e-35 Score=309.78 Aligned_cols=269 Identities=22% Similarity=0.288 Sum_probs=198.7
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh-HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE-RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++++|.+.+.||+|+||.||+|... +++.||+|++..... .....+.+|+.+++.++|+||+++.+++.+++..++||
T Consensus 3 ~~~~y~~~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~lv~ 82 (291)
T cd07870 3 AATSYLNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKHANIVLLHDIIHTKETLTFVF 82 (291)
T ss_pred ccceeEEEEEEEecCCEEEEEEEEcCCCcEEEEEEecccCcCCCcHHHHHHHHHHHhcCCCCEeEEEEEEecCCeEEEEE
Confidence 3578999999999999999999864 788999999865432 22345678999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+. +++.+++......+++..+..++.|++.||.||| ..+|+||||||+||+++.++.+||+|||+++......
T Consensus 83 e~~~-~~l~~~~~~~~~~~~~~~~~~~~~qi~~~L~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~ 157 (291)
T cd07870 83 EYMH-TDLAQYMIQHPGGLHPYNVRLFMFQLLRGLAYIH----GQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPS 157 (291)
T ss_pred eccc-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCChHHEEEcCCCcEEEeccccccccCCCC
Confidence 9995 7888888765555788889999999999999999 6789999999999999999999999999997643322
Q ss_pred CcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHh-cC-----------
Q 003855 657 DSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKES-LP----------- 723 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~-~~----------- 723 (791)
. ......++..|+|||...+ ..++.++|||||||++|||++|+.||+........+...+... .+
T Consensus 158 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (291)
T cd07870 158 Q--TYSSEVVTLWYRPPDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWPGVSKL 235 (291)
T ss_pred C--CCCCccccccccCCceeecCCCCCcHHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHcCCCChhhhhhhhhc
Confidence 1 1223356889999998765 4578899999999999999999999975432211111111000 00
Q ss_pred -CChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 724 -HGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 724 -~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
........................+..+.+++.+|+..||++|||+.|++.
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~l~~dp~~R~t~~~~l~ 287 (291)
T cd07870 236 PNYKPEWFLPCKPQQLRVVWKRLSRPPKAEDLASQMLMMFPKDRISAQDALL 287 (291)
T ss_pred ccccchhccccCCcchhhhccccCCChHHHHHHHHHhCcCcccCcCHHHHhc
Confidence 000000000000000000000112456789999999999999999999874
No 265
>smart00219 TyrKc Tyrosine kinase, catalytic domain. Phosphotransferases. Tyrosine-specific kinase subfamily.
Probab=100.00 E-value=2.3e-35 Score=304.16 Aligned_cols=250 Identities=30% Similarity=0.534 Sum_probs=201.7
Q ss_pred cccccccCCCcceEEEEEEecC-----CcEEEEEEeehhhhH-HHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 503 FNECNLLGTGSFGSVYKGTISD-----GTDVAIKIFNLQLER-AFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~~-----~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
+++.+.||+|+||.||+|+..+ +..||+|++...... ..+.+..|+.++++++||||+++++++.+.+..+++|
T Consensus 1 ~~~~~~lg~g~~g~v~~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~i~ 80 (258)
T smart00219 1 LTLGKKLGEGAFGEVYKGTLKGLSGEKEVEVAVKTLKEDADEQQIEEFLREARIMRKLDHPNIVKLLGVCTEEEPLMIVM 80 (258)
T ss_pred CcccceeccCCCcceEEEEecCCCCCCCceEEEEEccCCCChHHHHHHHHHHHHHHhcCCCchheEEEEEcCCCeeEEEE
Confidence 3567899999999999999753 488999998755433 5678899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCC-CCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 577 EFMPNGSLEKWLYSHNYF-LDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~-~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
||+++++|.+++...... +++..+..++.|++.|++||| +.+++||||+|+||++++++.++++|||+++.....
T Consensus 81 e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ql~~~l~~lh----~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~ 156 (258)
T smart00219 81 EYMEGGDLLDYLRKNRPKELSLSDLLSFALQIARGMEYLE----SKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDD 156 (258)
T ss_pred eccCCCCHHHHHHhhhhccCCHHHHHHHHHHHHHHHHHHh----cCCeeecccccceEEEccCCeEEEcccCCceecccc
Confidence 999999999999865544 899999999999999999999 678999999999999999999999999999876544
Q ss_pred CCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
...... ...++..|+|||...+..++.++||||+|+++|||++ |..||.... .....+.+.....
T Consensus 157 ~~~~~~-~~~~~~~y~~Pe~~~~~~~~~~~Di~slG~i~~~l~~~g~~p~~~~~--~~~~~~~~~~~~~----------- 222 (258)
T smart00219 157 DYYKKK-GGKLPIRWMAPESLKDGKFTSKSDVWSFGVLLWEIFTLGESPYPGMS--NEEVLEYLKKGYR----------- 222 (258)
T ss_pred cccccc-cCCCcccccChHHhccCCCCcchhHHHHHHHHHHHHhCCCCCCCCCC--HHHHHHHHhcCCC-----------
Confidence 222211 2236789999999988889999999999999999998 778876521 1111111111000
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
......++.++.+++.+|++.+|++|||+.|+++.|
T Consensus 223 ------~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~~l 258 (258)
T smart00219 223 ------LPKPENCPPEIYKLMLQCWAEDPEDRPTFSELVEIL 258 (258)
T ss_pred ------CCCCCcCCHHHHHHHHHHCcCChhhCcCHHHHHhhC
Confidence 001112456788999999999999999999998764
No 266
>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio
Probab=100.00 E-value=2.6e-35 Score=308.88 Aligned_cols=266 Identities=21% Similarity=0.232 Sum_probs=200.7
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
++|+..+.||+|+||.||+|+.+ +++.||+|++.... ....+.+.+|+.++++++|||++++++++..+...++|||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~~v~e 80 (286)
T cd07847 1 EKYEKLSKIGEGSYGVVFKCRNRETGQIVAIKKFVESEDDPVIKKIALREIRMLKQLKHPNLVNLIEVFRRKRKLHLVFE 80 (286)
T ss_pred CceeeeeeecccCCeEEEEEEECCCCcEEEEEEEeecccCccccHHHHHHHHHHHhCCCCCEeeeeeEEeeCCEEEEEEe
Confidence 46888999999999999999976 68999999886442 2233567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|++++++..++.... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~ql~~~l~~LH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07847 81 YCDHTVLNELEKNPR-GVPEHLIKKIIWQTLQAVNFCH----KHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGD 155 (286)
T ss_pred ccCccHHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH----HCCceecCCChhhEEEcCCCcEEECccccceecCCCcc
Confidence 999988888766443 4899999999999999999999 67899999999999999999999999999987654332
Q ss_pred cceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC--Chhhhcc---
Q 003855 658 SVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH--GLTEVVD--- 731 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~~~~~d--- 731 (791)
......++..|+|||++.+ ..++.++||||||+++|||++|+.||.+....+. ........... ......+
T Consensus 156 --~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~i~~~l~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07847 156 --DYTDYVATRWYRAPELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQ-LYLIRKTLGDLIPRHQQIFSTNQ 232 (286)
T ss_pred --cccCcccccccCCHHHHhCCCCcCchhhhHHHHHHHHHHHhCCCCCCCCChHHH-HHHHHHHhCCCChHHhhhccccc
Confidence 1122347788999998765 5688999999999999999999999975432211 11111100000 0000000
Q ss_pred -------hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 -------ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 -------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+...............+..+.+++.+||+.+|++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~eil~ 282 (286)
T cd07847 233 FFKGLSIPEPETREPLESKFPNISSPALSFLKGCLQMDPTERLSCEELLE 282 (286)
T ss_pred ccccccCCCcccccCHHHHhccCCHHHHHHHHHHhcCCccccCCHHHHhc
Confidence 0000000000011234567889999999999999999999875
No 267
>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a
Probab=100.00 E-value=2.6e-35 Score=311.52 Aligned_cols=256 Identities=20% Similarity=0.245 Sum_probs=200.3
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|+..+.||+|+||.||++... +++.||+|.+.... ....+.+.+|+.+++.++||||+++++.+..++..++||
T Consensus 1 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~ 80 (305)
T cd05609 1 EDFETIKLISNGAYGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSFETKRHLCMVM 80 (305)
T ss_pred CCceEeeEeecCCCeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEEecCCEEEEEE
Confidence 36888999999999999999875 67899999987553 233457888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++++|.+++...+ .+++..+..++.|++.|+.||| +.+++||||||+||++++++.++++|||+++......
T Consensus 81 e~~~g~~L~~~l~~~~-~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~ 155 (305)
T cd05609 81 EYVEGGDCATLLKNIG-ALPVDMARMYFAETVLALEYLH----NYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSL 155 (305)
T ss_pred ecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCchHHEEECCCCCEEEeeCCCccccCcCc
Confidence 9999999999997654 4889999999999999999999 6789999999999999999999999999987421110
Q ss_pred C-------------cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcC
Q 003855 657 D-------------SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP 723 (791)
Q Consensus 657 ~-------------~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (791)
. ........++..|+|||.+....++.++|||||||++|||++|+.||.+.... ++......
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~vl~el~~g~~pf~~~~~~-----~~~~~~~~ 230 (305)
T cd05609 156 TTNLYEGHIEKDTREFLDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDTPE-----ELFGQVIS 230 (305)
T ss_pred cccccccccccchhhccccCCccCccccCchhccCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHHh
Confidence 0 00111235688899999998888999999999999999999999998643211 11111110
Q ss_pred CChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 724 HGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 724 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
.... .+ .....++..+.+++.+||+.+|++||++.++.+.++.
T Consensus 231 ~~~~---~~---------~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~~~ll~~ 273 (305)
T cd05609 231 DDIE---WP---------EGDEALPADAQDLISRLLRQNPLERLGTGGAFEVKQH 273 (305)
T ss_pred cccC---CC---------CccccCCHHHHHHHHHHhccChhhccCccCHHHHHhC
Confidence 0000 00 0001245667899999999999999997666665543
No 268
>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3. Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac
Probab=100.00 E-value=2.4e-35 Score=306.83 Aligned_cols=254 Identities=26% Similarity=0.466 Sum_probs=199.0
Q ss_pred cccccccCCCcceEEEEEEec----CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCC------
Q 003855 503 FNECNLLGTGSFGSVYKGTIS----DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPD------ 570 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 570 (791)
|.+.+.||+|+||.||+|.+. +++.||||++.... ....+.+.+|+.++++++||||+++++++....
T Consensus 1 ~~~~~~ig~g~~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 80 (273)
T cd05074 1 FTLGRMLGKGEFGSVREAQLKSEDGSFQKVAVKMLKADIFSSSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRAKGRLP 80 (273)
T ss_pred CcchhcccCCCCCCEEeeEeeccCCCceEEEEEEeccccCChHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCCCCccc
Confidence 566789999999999999853 46889999986542 344567889999999999999999999875432
Q ss_pred eeeEEEecCCCCCHHHHHhhC-----CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEee
Q 003855 571 FKALVLEFMPNGSLEKWLYSH-----NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSD 645 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~-----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~D 645 (791)
..++++||+++|+|.+++... ...+++..+.+++.|++.|++||| +.+|+||||||+||++++++.+|++|
T Consensus 81 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH----~~~i~H~dikp~nili~~~~~~kl~d 156 (273)
T cd05074 81 IPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFMIDIASGMEYLS----SKNFIHRDLAARNCMLNENMTVCVAD 156 (273)
T ss_pred ceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHHHHHHHHHHHHH----hCCEeecccchhhEEEcCCCCEEECc
Confidence 347899999999999887532 224788999999999999999999 67899999999999999999999999
Q ss_pred eccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCC
Q 003855 646 FGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPH 724 (791)
Q Consensus 646 fgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~ 724 (791)
||+++...............++..|++||......++.++|||||||++|||++ |+.||..... .....++.....
T Consensus 157 fg~~~~~~~~~~~~~~~~~~~~~~~~~pe~~~~~~~~~~sDi~slG~il~el~~~g~~p~~~~~~--~~~~~~~~~~~~- 233 (273)
T cd05074 157 FGLSKKIYSGDYYRQGCASKLPVKWLALESLADNVYTTHSDVWAFGVTMWEIMTRGQTPYAGVEN--SEIYNYLIKGNR- 233 (273)
T ss_pred ccccccccCCcceecCCCccCchhhcCHhHHhcCccchhhhhHHHHHHHHHHhhCCCCCCCCCCH--HHHHHHHHcCCc-
Confidence 999987644332222223345678999999988889999999999999999999 8888865322 112222111000
Q ss_pred ChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHH
Q 003855 725 GLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKI 779 (791)
Q Consensus 725 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~ 779 (791)
. .....++..+.+++.+|++.+|++||++.++++.|+++
T Consensus 234 -~---------------~~~~~~~~~~~~l~~~~l~~~p~~Rps~~~~~~~l~~~ 272 (273)
T cd05074 234 -L---------------KQPPDCLEDVYELMCQCWSPEPKCRPSFQHLRDQLELI 272 (273)
T ss_pred -C---------------CCCCCCCHHHHHHHHHHcCCChhhCcCHHHHHHHHHhh
Confidence 0 00112446788999999999999999999999999875
No 269
>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.
Probab=100.00 E-value=3.8e-35 Score=304.66 Aligned_cols=252 Identities=24% Similarity=0.382 Sum_probs=200.1
Q ss_pred ccccccccCCCcceEEEEEEecC--CcEEEEEEeehh----------hhHHHHHHHHHHHHHHh-ccCCccceeeeeecc
Q 003855 502 EFNECNLLGTGSFGSVYKGTISD--GTDVAIKIFNLQ----------LERAFRSFDSECEVLRN-VRHRNLIKILSSCSN 568 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~~--~~~vavK~~~~~----------~~~~~~~~~~e~~~l~~-l~h~niv~l~~~~~~ 568 (791)
+|++.+.||+|+||.||+|.... ++.+|+|.+... .......+..|+.++.+ ++||||+++++++.+
T Consensus 1 ~y~~~~~ig~G~~~~v~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~ 80 (269)
T cd08528 1 EYAVLEHLGSGAFGCVYKVRKKNNGQNLLALKEINVHNPAFGKDKRERDKSIGDIVSEVTIIKEQLRHPNIVRYYKTFLE 80 (269)
T ss_pred CchhhhhhcCCCCceEEEEEEcCCCCceeeeeEeeccccccccccccchHHHHHHHHHHHHHhhcCCCCCeeeEEeeEcc
Confidence 47788899999999999999764 688999987532 12334567778888875 699999999999999
Q ss_pred CCeeeEEEecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEee
Q 003855 569 PDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSD 645 (791)
Q Consensus 569 ~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~D 645 (791)
.+..++||||+++++|.+++.. ....+++..+++++.|++.|+.|||+ ..+++||||+|+||++++++.++|+|
T Consensus 81 ~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh~---~~~i~H~dl~~~nil~~~~~~~~l~d 157 (269)
T cd08528 81 NDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIFVQMVLALRYLHK---EKRIVHRDLTPNNIMLGEDDKVTITD 157 (269)
T ss_pred CCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHHHHHHHHHHHhcc---CCceeecCCCHHHEEECCCCcEEEec
Confidence 9999999999999999998853 34568999999999999999999993 35799999999999999999999999
Q ss_pred eccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC
Q 003855 646 FGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG 725 (791)
Q Consensus 646 fgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (791)
||.+....... ......++..|+|||+..++.++.++||||||+++|||++|+.||..... ......+.. ..
T Consensus 158 fg~~~~~~~~~---~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~ll~~l~~g~~p~~~~~~--~~~~~~~~~---~~ 229 (269)
T cd08528 158 FGLAKQKQPES---KLTSVVGTILYSCPEIVKNEPYGEKADVWAFGCILYQMCTLQPPFYSTNM--LSLATKIVE---AV 229 (269)
T ss_pred ccceeeccccc---ccccccCcccCcChhhhcCCCCchHHHHHHHHHHHHHHHhCCCcccccCH--HHHHHHHhh---cc
Confidence 99998765432 22344688899999999888899999999999999999999999864211 111111100 00
Q ss_pred hhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 726 LTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 726 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
... .....++.++.+++.+||+.||++||++.|+.++++
T Consensus 230 ~~~-------------~~~~~~~~~l~~li~~cl~~~p~~Rp~~~e~~~~~~ 268 (269)
T cd08528 230 YEP-------------LPEGMYSEDVTDVITSCLTPDAEARPDIIQVSAMIS 268 (269)
T ss_pred CCc-------------CCcccCCHHHHHHHHHHCCCCCccCCCHHHHHHHhc
Confidence 000 001123466889999999999999999999999875
No 270
>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin. Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear
Probab=100.00 E-value=2.3e-35 Score=309.27 Aligned_cols=258 Identities=23% Similarity=0.310 Sum_probs=199.5
Q ss_pred hHHHHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeec----
Q 003855 494 LDIQRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCS---- 567 (791)
Q Consensus 494 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~---- 567 (791)
..+....++|++.+.||+|+||.||+|... +++.||+|++.... .....+..|+.+++++ +||||+++++++.
T Consensus 11 ~~~~~~~~~~~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~-~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~ 89 (286)
T cd06638 11 DSFPDPSDTWEIIETIGKGTYGKVFKVLNKKNGSKAAVKILDPIH-DIDEEIEAEYNILKALSDHPNVVKFYGMYYKKDV 89 (286)
T ss_pred ecCCCcccceeeeeeeccCCCcEEEEEEECCCCceeEEEeecccc-chHHHHHHHHHHHHHHhcCCCeeeeeeeeeeccc
Confidence 344456789999999999999999999864 68899999876432 2235677899999999 7999999999873
Q ss_pred -cCCeeeEEEecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEE
Q 003855 568 -NPDFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHV 643 (791)
Q Consensus 568 -~~~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl 643 (791)
.++..++||||+++|+|.+++.. ....+++..+..++.|+++|+.||| +.+++||||||+||++++++.+++
T Consensus 90 ~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dlkp~nili~~~~~~kl 165 (286)
T cd06638 90 KNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYILHEALMGLQHLH----VNKTIHRDVKGNNILLTTEGGVKL 165 (286)
T ss_pred CCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHHHHHHHHHHHHH----hCCccccCCCHHhEEECCCCCEEE
Confidence 44678999999999999998863 2345788999999999999999999 678999999999999999999999
Q ss_pred eeeccccccCCCCCcceeecccccccccCCCccC-----CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHH
Q 003855 644 SDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWV 718 (791)
Q Consensus 644 ~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~ 718 (791)
+|||+++....... ......|+..|+|||++. +..++.++||||+||++|||++|+.||...... ..+.
T Consensus 166 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slGvi~~el~~g~~p~~~~~~~----~~~~ 239 (286)
T cd06638 166 VDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQLDSTYDARCDVWSLGITAIELGDGDPPLADLHPM----RALF 239 (286)
T ss_pred ccCCceeecccCCC--ccccccCCCcccChhhhchhhhccccccchhhhhhHHHHHHHHhcCCCCCCCCchh----HHHh
Confidence 99999986643221 222346889999999874 345788999999999999999999998653221 1111
Q ss_pred HHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 719 KESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 719 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
. ..........+ +..++..+.+++.+||+.||++||++.|+++.
T Consensus 240 ~-~~~~~~~~~~~------------~~~~~~~~~~li~~~l~~~p~~Rps~~ell~~ 283 (286)
T cd06638 240 K-IPRNPPPTLHQ------------PELWSNEFNDFIRKCLTKDYEKRPTVSDLLQH 283 (286)
T ss_pred h-ccccCCCcccC------------CCCcCHHHHHHHHHHccCCcccCCCHHHHhhc
Confidence 0 00000000000 11234567899999999999999999999874
No 271
>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express
Probab=100.00 E-value=1.7e-35 Score=310.45 Aligned_cols=249 Identities=22% Similarity=0.325 Sum_probs=199.2
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
.|.....||+|+||.||++... ++..||||.+........+.+..|+.+++.++||||+++++.+..++..++||||++
T Consensus 23 ~~~~~~~lg~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~~~~~~~~lv~e~~~ 102 (292)
T cd06658 23 YLDSFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSYLVGDELWVVMEFLE 102 (292)
T ss_pred HHhhhhcccCCCCeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHheecCCeEEEEEeCCC
Confidence 3444567999999999999864 688999999876555556778899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+++|.+++... .+++.++..++.||+.|++||| +.+|+||||||+||++++++.++|+|||++........ .
T Consensus 103 ~~~L~~~~~~~--~l~~~~~~~~~~qi~~~l~~LH----~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~--~ 174 (292)
T cd06658 103 GGALTDIVTHT--RMNEEQIATVCLSVLRALSYLH----NQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVP--K 174 (292)
T ss_pred CCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccc--c
Confidence 99999988654 3789999999999999999999 67899999999999999999999999999976533221 1
Q ss_pred eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHh
Q 003855 661 QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQA 740 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 740 (791)
.....|+..|+|||+..+..++.++||||||+++|||++|+.||...... ..+.. +....+. ...
T Consensus 175 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~-~~~~~~~--------~~~----- 239 (292)
T cd06658 175 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPL-QAMRR-IRDNLPP--------RVK----- 239 (292)
T ss_pred CceeecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHHHH-HHhcCCC--------ccc-----
Confidence 22345789999999998888999999999999999999999998652211 11111 1110000 000
Q ss_pred hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 741 FSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 741 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.....+..+.+++.+|+..||++|||+.|+++.
T Consensus 240 --~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~~ 272 (292)
T cd06658 240 --DSHKVSSVLRGFLDLMLVREPSQRATAQELLQH 272 (292)
T ss_pred --cccccCHHHHHHHHHHccCChhHCcCHHHHhhC
Confidence 011234567789999999999999999999864
No 272
>KOG0584 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=2.6e-36 Score=316.92 Aligned_cols=243 Identities=25% Similarity=0.413 Sum_probs=198.6
Q ss_pred ccccCCCcceEEEEEEec-CCcEEEEEEeeh----hhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCe--eeEEEec
Q 003855 506 CNLLGTGSFGSVYKGTIS-DGTDVAIKIFNL----QLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDF--KALVLEF 578 (791)
Q Consensus 506 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~----~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--~~lv~e~ 578 (791)
...||+|+|-+||+|.+. +|..||=-.++. ...+..+.|..|+.+++.|+||||++++.++.+... .-+|+|.
T Consensus 45 ~evLGrGafKtVYka~De~~giEVAWnqvk~~d~~q~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d~~n~~in~iTEL 124 (632)
T KOG0584|consen 45 DEVLGRGAFKTVYKAFDEEEGIEVAWNQVKIRDVTQSPEELERLYSEVHLLKSLKHPNIIRFYDSWVDTDNKTINFITEL 124 (632)
T ss_pred hhhcccccceeeeeccccccchhhHHHHHhHHHhhcChHHHHHHHHHHHHHccCCCCceeeeeeheecCCCceeeeeeec
Confidence 458999999999999874 566665322221 123445789999999999999999999999977655 6789999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC-CCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD-ENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+..|+|..|..+.+. .+...+..|++||++||.|||.. .++|+|||||-+||||+ .-|.|||+|+|+|+......
T Consensus 125 ~TSGtLr~Y~kk~~~-vn~kaik~W~RQILkGL~yLHs~--~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~- 200 (632)
T KOG0584|consen 125 FTSGTLREYRKKHRR-VNIKAIKSWCRQILKGLVYLHSQ--DPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSH- 200 (632)
T ss_pred ccCCcHHHHHHHhcc-CCHHHHHHHHHHHHHHhhhhhcC--CCCccccccccceEEEcCCcCceeecchhHHHHhhccc-
Confidence 999999999998765 88899999999999999999975 45899999999999997 57999999999999875432
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
....+|||.|||||... ..|++.+||||||+.++||+|+..||.+......-+.+......|..+..+-|
T Consensus 201 ---aksvIGTPEFMAPEmYE-E~YnE~VDVYaFGMCmLEMvT~eYPYsEC~n~AQIYKKV~SGiKP~sl~kV~d------ 270 (632)
T KOG0584|consen 201 ---AKSVIGTPEFMAPEMYE-ENYNELVDVYAFGMCMLEMVTSEYPYSECTNPAQIYKKVTSGIKPAALSKVKD------ 270 (632)
T ss_pred ---cceeccCccccChHHHh-hhcchhhhhhhhhHHHHHHHhccCChhhhCCHHHHHHHHHcCCCHHHhhccCC------
Confidence 22368999999999876 68999999999999999999999999887655544444444444444444444
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+++.++|.+|+.. .++|||+.|+++
T Consensus 271 -----------Pevr~fIekCl~~-~~~R~sa~eLL~ 295 (632)
T KOG0584|consen 271 -----------PEVREFIEKCLAT-KSERLSAKELLK 295 (632)
T ss_pred -----------HHHHHHHHHHhcC-chhccCHHHHhh
Confidence 4456899999999 999999999975
No 273
>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.
Probab=100.00 E-value=9.5e-35 Score=299.48 Aligned_cols=248 Identities=25% Similarity=0.340 Sum_probs=199.3
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeecc-CCeeeEEEe
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSN-PDFKALVLE 577 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~~~lv~e 577 (791)
+|++.+.||+|++|.||+++.+ +++.||+|.+.... ....+.+.+|++++++++|||++++.+.+.. ....++|||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~lv~e 80 (257)
T cd08223 1 AYCFVRVVGKGSYGEVSLVRHRTDGKQYVIKKLNLRNASRRERKAAEQEAQLLSQLKHPNIVAYRESWEGEDGLLYIVMG 80 (257)
T ss_pred CceEEEEecCCCCeEEEEEEEcCCCcEEEEEEEehhhcCHHHHHHHHHHHHHHHhCCCCCeeeeeeeecCCCCEEEEEec
Confidence 4788999999999999999865 67899999986543 3445678899999999999999999988764 446789999
Q ss_pred cCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 578 FMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 578 ~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
|+++++|.+++... ...+++.++..++.+++.|++||| +.+++||||||+||+++.++.++|+|||++.......
T Consensus 81 ~~~~~~l~~~l~~~~~~~l~~~~~~~~~~~l~~~l~~lH----~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~ 156 (257)
T cd08223 81 FCEGGDLYHKLKEQKGKLLPENQVVEWFVQIAMALQYLH----EKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQC 156 (257)
T ss_pred ccCCCcHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCchhEEEecCCcEEEecccceEEecccC
Confidence 99999999999864 345899999999999999999999 6789999999999999999999999999998764322
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
. ......+++.|+|||+..+..++.++||||||+++|||++|+.||+.... .............
T Consensus 157 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~--------- 220 (257)
T cd08223 157 D--MASTLIGTPYYMSPELFSNKPYNYKSDVWALGCCVYEMATLKHAFNAKDM-----NSLVYRIIEGKLP--------- 220 (257)
T ss_pred C--ccccccCCcCccChhHhcCCCCCchhhhHHHHHHHHHHHcCCCCCCCCCH-----HHHHHHHHhcCCC---------
Confidence 1 12234578899999999999999999999999999999999999864221 1111111110000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.+..++..+.+++.+|++.+|++||++.++++
T Consensus 221 -----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 253 (257)
T cd08223 221 -----PMPKDYSPELGELIATMLSKRPEKRPSVKSILR 253 (257)
T ss_pred -----CCccccCHHHHHHHHHHhccCcccCCCHHHHhc
Confidence 001134466889999999999999999999975
No 274
>KOG0983 consensus Mitogen-activated protein kinase (MAPK) kinase MKK7/JNKK2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-36 Score=284.52 Aligned_cols=251 Identities=24% Similarity=0.279 Sum_probs=198.3
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 577 (791)
++.+.+..+|.|+.|.||++++. +|...|||.+.... .+..+.+...+.++..- ++|+||+-+|||......++.||
T Consensus 92 ndl~~l~dlGsGtcG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi~n~dV~IcMe 171 (391)
T KOG0983|consen 92 NDLENLGDLGSGTCGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFITNTDVFICME 171 (391)
T ss_pred HHhhhHHhhcCCCccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEeeCchHHHHHH
Confidence 44556678999999999999975 68999999987553 44456666777777665 48999999999998888999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
.|. ..+..++..-..++++.-.-++...+.+||.||.+ +++|+|||+||+|||+|+.|++|+||||++..+-+
T Consensus 172 lMs-~C~ekLlkrik~piPE~ilGk~tva~v~AL~YLKe---KH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvd--- 244 (391)
T KOG0983|consen 172 LMS-TCAEKLLKRIKGPIPERILGKMTVAIVKALYYLKE---KHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVD--- 244 (391)
T ss_pred HHH-HHHHHHHHHhcCCchHHhhhhhHHHHHHHHHHHHH---hcceeecccCccceEEccCCCEEeecccccceeec---
Confidence 983 36666676666668888888999999999999986 56899999999999999999999999999977643
Q ss_pred cceeecccccccccCCCccCC---CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSE---GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
+...+..+|-+.|||||.+.. ..|+.++|||||||+++|+.||+.||.+.......+.. +.
T Consensus 245 SkAhtrsAGC~~YMaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltk-vl--------------- 308 (391)
T KOG0983|consen 245 SKAHTRSAGCAAYMAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTK-VL--------------- 308 (391)
T ss_pred ccccccccCCccccCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHH-HH---------------
Confidence 444555678899999998754 46888999999999999999999999874333222222 11
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..++...+..+..++.+.+++..|++.|+.+||...++++
T Consensus 309 n~ePP~L~~~~gFSp~F~~fv~~CL~kd~r~RP~Y~~Ll~ 348 (391)
T KOG0983|consen 309 NEEPPLLPGHMGFSPDFQSFVKDCLTKDHRKRPKYNKLLE 348 (391)
T ss_pred hcCCCCCCcccCcCHHHHHHHHHHhhcCcccCcchHHHhc
Confidence 1112222223346677889999999999999999998875
No 275
>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase. Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki
Probab=100.00 E-value=2.2e-35 Score=303.59 Aligned_cols=246 Identities=29% Similarity=0.506 Sum_probs=198.0
Q ss_pred hccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
++|++.+.||+|+||.||+|.. +++.||+|.+.... ..+.+.+|+.++++++|||++++++++... ..++||||++
T Consensus 6 ~~~~~~~~lg~g~~g~v~~~~~-~~~~~~iK~~~~~~--~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~-~~~~v~e~~~ 81 (254)
T cd05083 6 QKLTLGEIIGEGEFGAVLQGEY-TGQKVAVKNIKCDV--TAQAFLEETAVMTKLHHKNLVRLLGVILHN-GLYIVMELMS 81 (254)
T ss_pred HHceeeeeeccCCCCceEeccc-CCCceEEEeecCcc--hHHHHHHHHHHHHhCCCCCcCeEEEEEcCC-CcEEEEECCC
Confidence 5688999999999999999986 67889999986543 235788899999999999999999998654 4789999999
Q ss_pred CCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 581 NGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 581 ~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
+|+|.+++.... ..+++..+..++.|++.|+.||| +.+++||||||+||+++.++.+||+|||++.......
T Consensus 82 ~~~L~~~l~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~--- 154 (254)
T cd05083 82 KGNLVNFLRTRGRALVSVIQLLQFSLDVAEGMEYLE----SKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGV--- 154 (254)
T ss_pred CCCHHHHHHhcCcCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccccCcceEEEcCCCcEEECCCccceeccccC---
Confidence 999999998653 35789999999999999999999 6789999999999999999999999999997643221
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
.....+..|+|||++.++.++.++|||||||++|||++ |+.||...... .....+.. ..
T Consensus 155 --~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~--~~~~~~~~----~~------------ 214 (254)
T cd05083 155 --DNSKLPVKWTAPEALKHKKFSSKSDVWSYGVLLWEVFSYGRAPYPKMSLK--EVKECVEK----GY------------ 214 (254)
T ss_pred --CCCCCCceecCHHHhccCCcCchhhHHHHHHHHHHHHhCCCCCCccCCHH--HHHHHHhC----CC------------
Confidence 11234567999999988899999999999999999998 89998653221 11111110 00
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
.......++..+.+++.+||+.+|++||+++++++.|++
T Consensus 215 -~~~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~l~~~l~~ 253 (254)
T cd05083 215 -RMEPPEGCPADVYVLMTSCWETEPKKRPSFHKLREKLEK 253 (254)
T ss_pred -CCCCCCcCCHHHHHHHHHHcCCChhhCcCHHHHHHHHcc
Confidence 000112345678899999999999999999999998753
No 276
>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi
Probab=100.00 E-value=2.9e-35 Score=309.02 Aligned_cols=250 Identities=24% Similarity=0.317 Sum_probs=203.2
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
++|.+.+.||+|+||.||+|... +++.||+|.+........+.+..|+.++++++||||+++++++...+..++|+||+
T Consensus 19 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~lv~e~~ 98 (293)
T cd06647 19 KKYTRFEKIGQGASGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSYLVGDELWVVMEYL 98 (293)
T ss_pred hhceeeeEecCCCCeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhheeeeCCcEEEEEecC
Confidence 68899999999999999999854 78899999987555455577889999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
++++|.+++.+.. +++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||++........
T Consensus 99 ~~~~L~~~~~~~~--l~~~~~~~i~~~l~~al~~LH----~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~-- 170 (293)
T cd06647 99 AGGSLTDVVTETC--MDEGQIAAVCRECLQALEFLH----SNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-- 170 (293)
T ss_pred CCCcHHHHHhhcC--CCHHHHHHHHHHHHHHHHHHH----hCCEeeccCCHHHEEEcCCCCEEEccCcceeccccccc--
Confidence 9999999997643 788999999999999999999 67899999999999999999999999999876544322
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
......+++.|+|||+...+.++.++||||||+++||+++|+.||......+.. ... . .... .
T Consensus 171 ~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~ll~~ll~g~~pf~~~~~~~~~-~~~-~---~~~~------------~ 233 (293)
T cd06647 171 KRSTMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMVEGEPPYLNENPLRAL-YLI-A---TNGT------------P 233 (293)
T ss_pred ccccccCChhhcCchhhccCCCCchhhHHHHHHHHHHHHhCCCCCCCCChhhhe-eeh-h---cCCC------------C
Confidence 122345788999999988888999999999999999999999999753221110 000 0 0000 0
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
........+..+.+++.+||..+|++||++.+++..
T Consensus 234 ~~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~h 269 (293)
T cd06647 234 ELQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQH 269 (293)
T ss_pred CCCCccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 001111234567899999999999999999999865
No 277
>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase. Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea
Probab=100.00 E-value=6.9e-35 Score=305.68 Aligned_cols=265 Identities=22% Similarity=0.266 Sum_probs=202.6
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+.+|+.++++++||||+++++++.++...++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~ 80 (286)
T cd07832 1 RYKILGRIGEGAHGIVFKAKDRETGETVALKKVALRRLEGGIPNQALREIKALQACQHPYVVKLLDVFPHGSGFVLVMEY 80 (286)
T ss_pred CceEEeecccCCCcEEEEEEECCCCceEEEEEEEcccccchhhHHHHHHHHHHHhCCCCCCcceeeEEecCCeeEEEecc
Confidence 4788899999999999999974 78999999987553 33456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+ +++|.+++......+++.++..++.||++||+||| +.+++|+||||+||++++++.++++|||++........
T Consensus 81 ~-~~~L~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~- 154 (286)
T cd07832 81 M-PSDLSEVLRDEERPLPEAQVKSYMRMLLKGVAYMH----ANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEP- 154 (286)
T ss_pred c-CCCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCC-
Confidence 9 99999999876666899999999999999999999 67899999999999999999999999999987654322
Q ss_pred ceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC----hhhhcc--
Q 003855 659 VTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG----LTEVVD-- 731 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~d-- 731 (791)
.......++..|+|||.+.+ ..++.++||||+|+++|||++|.+||...... ..+. ++....... ..+..+
T Consensus 155 ~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07832 155 RLYSHQVATRWYRAPELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDI-EQLA-IVFRTLGTPNEETWPGLTSLP 232 (286)
T ss_pred CccccccCcccccCceeeeccccCCchhHHHHHHHHHHHHHcCCcCcCCCCHH-HHHH-HHHHHcCCCChHHHhhccCcc
Confidence 12233468899999998754 44689999999999999999998877643221 1111 111111100 000000
Q ss_pred -hh---hhhhH--HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 -AN---LVREE--QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 -~~---~~~~~--~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.. ..... .-.....+.+..+.+++.+|++.+|++||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~l~ 281 (286)
T cd07832 233 DYNKITFPESKPIPLEEIFPDASPEALDLLKGLLVYDPSKRLSAAEALR 281 (286)
T ss_pred hhhcccCCCCCcchHHHhCCCccHHHHHHHHHHhccChhhCCCHHHHhh
Confidence 00 00000 000011134577889999999999999999999976
No 278
>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops
Probab=100.00 E-value=6.8e-35 Score=300.73 Aligned_cols=247 Identities=27% Similarity=0.360 Sum_probs=200.0
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-----hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-----ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
+|+..+.||+|+||.||+|... +++.|++|.+.... .+..+.+..|+.+++.++||||+++++++.+....++|
T Consensus 1 ~~~~~~~ig~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (258)
T cd06632 1 RWRKGELLGSGSFGSVYEGLNLDDGDFFAVKEVSLADDGQTGQEAVKQLEQEIALLSKLQHPNIVQYLGTEREEDNLYIF 80 (258)
T ss_pred CccccceeeecCCceEEEEEEcCCCcEEEEEEEEEccccccchHHHHHHHHHHHHHHhcCCCCchheeeeEecCCeEEEE
Confidence 4677789999999999999976 78999999886533 33557789999999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
+||+++++|.+++.... .+++..+..++.|++.|++||| +.+++|+||+|+||++++++.+||+|||++......
T Consensus 81 ~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~ 155 (258)
T cd06632 81 LELVPGGSLAKLLKKYG-SFPEPVIRLYTRQILLGLEYLH----DRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEF 155 (258)
T ss_pred EEecCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEccCccceecccc
Confidence 99999999999998654 4789999999999999999999 678999999999999999999999999999875433
Q ss_pred CCcceeecccccccccCCCccCCCC-CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSEGI-VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
. ......++..|+|||...... ++.++|+||||+++|+|++|+.||....... ....+... ....
T Consensus 156 ~---~~~~~~~~~~y~~pe~~~~~~~~~~~~D~~slG~~l~~l~~g~~pf~~~~~~~-~~~~~~~~---~~~~------- 221 (258)
T cd06632 156 S---FAKSFKGSPYWMAPEVIAQQGGYGLAADIWSLGCTVLEMATGKPPWSQLEGVA-AVFKIGRS---KELP------- 221 (258)
T ss_pred c---cccccCCCcceeCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcccCcHHH-HHHHHHhc---ccCC-------
Confidence 2 123345788999999887666 8999999999999999999999987533111 01110000 0000
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+..++..+.+++.+||+.+|++||++.++++
T Consensus 222 -------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 254 (258)
T cd06632 222 -------PIPDHLSDEAKDFILKCLQRDPSLRPTAAELLE 254 (258)
T ss_pred -------CcCCCcCHHHHHHHHHHhhcCcccCcCHHHHhc
Confidence 001123466789999999999999999999975
No 279
>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti
Probab=100.00 E-value=8.6e-35 Score=299.61 Aligned_cols=248 Identities=21% Similarity=0.329 Sum_probs=201.8
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|+..+.||+|+||.||+++.. +|+.||+|.+.... ....+.+.+|+.++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~lg~g~~g~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08218 1 KYVKVKKIGEGSFGKAILVKSKEDGKQYVIKEINISKMSPKEREESRKEVAVLSNMKHPNIVQYQESFEENGNLYIVMDY 80 (256)
T ss_pred CceEEEEeccCCceEEEEEEEcCCCCEEEEEEEEhHhCChHHHHHHHHHHHHHHhCCCCCeeeeEeeecCCCeEEEEEec
Confidence 4788899999999999999864 78999999987542 33456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+++++|.+++... ...+++.++..++.|++.|+.||| +.+++|+||+|+||+++.++.++++|||++..+.....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~ 156 (256)
T cd08218 81 CEGGDLYKKINAQRGVLFPEDQILDWFVQICLALKHVH----DRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVE 156 (256)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchh
Confidence 9999999999764 335789999999999999999999 67899999999999999999999999999986643321
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
. .....|+..|+|||+..+..++.++|||||||+++||++|+.||..... ...+.........
T Consensus 157 ~--~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~i~~~l~~g~~~~~~~~~-----~~~~~~~~~~~~~---------- 219 (256)
T cd08218 157 L--ARTCIGTPYYLSPEICENRPYNNKSDIWALGCVLYEMCTLKHAFEAGNM-----KNLVLKIIRGSYP---------- 219 (256)
T ss_pred h--hhhccCCccccCHHHhCCCCCCCccchhHHHHHHHHHHcCCCCccCCCH-----HHHHHHHhcCCCC----------
Confidence 1 1223578899999999888899999999999999999999999864211 1111111111100
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+..++.++.+++.+||+.+|++||++.||++
T Consensus 220 ----~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~vl~ 252 (256)
T cd08218 220 ----PVSSHYSYDLRNLVSQLFKRNPRDRPSVNSILE 252 (256)
T ss_pred ----CCcccCCHHHHHHHHHHhhCChhhCcCHHHHhh
Confidence 011234566889999999999999999999986
No 280
>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of
Probab=100.00 E-value=2.1e-35 Score=315.77 Aligned_cols=240 Identities=23% Similarity=0.228 Sum_probs=185.2
Q ss_pred cCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc---cCCccceeeeeeccCCeeeEEEecCCC
Q 003855 509 LGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV---RHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 509 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
||+|+||.||+|+.. +++.||||++.... .........|..++... +||||+++++++.+....++||||+++
T Consensus 1 lG~G~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~~~~~~~~lv~e~~~~ 80 (330)
T cd05586 1 IGKGTFGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSFQTDSDLYLVTDYMSG 80 (330)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEEecCCeEEEEEcCCCC
Confidence 799999999999865 68999999986543 22233445566666655 699999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.+++.... .+++..+..++.||++||+||| +.+|+||||||+||+++.++.+||+|||+++....... ..
T Consensus 81 g~L~~~l~~~~-~~~~~~~~~~~~qil~al~~LH----~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~--~~ 153 (330)
T cd05586 81 GELFWHLQKEG-RFSEDRAKFYIAELVLALEHLH----KYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNK--TT 153 (330)
T ss_pred ChHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCC--Cc
Confidence 99999987654 4889999999999999999999 67899999999999999999999999999975432221 12
Q ss_pred ecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHh
Q 003855 662 TMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQA 740 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 740 (791)
....||..|+|||.+.+. .++.++||||+||++|||++|+.||..... ...+........ .+
T Consensus 154 ~~~~gt~~y~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~-----~~~~~~i~~~~~------~~------ 216 (330)
T cd05586 154 NTFCGTTEYLAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDT-----QQMYRNIAFGKV------RF------ 216 (330)
T ss_pred cCccCCccccCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCH-----HHHHHHHHcCCC------CC------
Confidence 234689999999987654 489999999999999999999999865221 111111100000 00
Q ss_pred hHHHHHHHHHHHHHHhhccccCCCCCCC----HHHHHH
Q 003855 741 FSAKMDCILSIMDLALDCCIESPDMRIN----VTDAAA 774 (791)
Q Consensus 741 ~~~~~~~~~~l~~li~~cl~~~P~~RPt----~~ev~~ 774 (791)
+ ...++..+.+++.+||+.||++||+ +.++++
T Consensus 217 -~-~~~~~~~~~~li~~~L~~~P~~R~~~~~~~~~ll~ 252 (330)
T cd05586 217 -P-KNVLSDEGRQFVKGLLNRNPQHRLGAHRDAVELKE 252 (330)
T ss_pred -C-CccCCHHHHHHHHHHcCCCHHHCCCCCCCHHHHhc
Confidence 0 0123456679999999999999994 555544
No 281
>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase. Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1
Probab=100.00 E-value=6.3e-35 Score=302.66 Aligned_cols=256 Identities=26% Similarity=0.349 Sum_probs=205.0
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|++.+.||.|+||+||+|... ++..+|+|++.... ....+.+.+|+.+++.++|+||+++++.+..++..++|+||
T Consensus 1 ~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e~ 80 (267)
T cd06610 1 DDYELIEVIGVGATAVVYAAICLPNNEKVAIKRIDLEKCQTSVDELRKEVQAMSQCNHPNVVKYYTSFVVGDELWLVMPY 80 (267)
T ss_pred CcceeeeeecCCCCeEEEEEEEcCCCcEEEEEEeccCCcchHHHHHHHHHHHHHhcCCCCEEEEEEEEeeCCEEEEEEec
Confidence 47889999999999999999864 68899999986443 33567889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 579 MPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 579 ~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
+++++|.+++... ...+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||++..+....
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lh----~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~ 156 (267)
T cd06610 81 LSGGSLLDIMKSSYPRGGLDEAIIATVLKEVLKGLEYLH----SNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGG 156 (267)
T ss_pred cCCCcHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCc
Confidence 9999999999854 245899999999999999999999 6789999999999999999999999999998765443
Q ss_pred Ccc--eeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 657 DSV--TQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 657 ~~~--~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
... ......|+..|+|||++... .++.++|||||||++|||++|+.||...... ....+......+. ... .
T Consensus 157 ~~~~~~~~~~~~~~~y~~Pe~~~~~~~~~~~~Dv~slG~i~~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~-~~~----~ 230 (267)
T cd06610 157 DRTRKVRKTFVGTPCWMAPEVMEQVHGYDFKADIWSFGITAIELATGAAPYSKYPPM-KVLMLTLQNDPPS-LET----G 230 (267)
T ss_pred cccccccccccCChhhcChHHHccccCcCcccchHhHhHHHHHHHhCCCCccccChh-hhHHHHhcCCCCC-cCC----c
Confidence 221 12334688999999988776 7899999999999999999999999753222 1122221110000 000 0
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.....++..+.+++.+|++.||++||++.|+++
T Consensus 231 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~ll~ 263 (267)
T cd06610 231 --------ADYKKYSKSFRKMISLCLQKDPSKRPTAEELLK 263 (267)
T ss_pred --------cccccccHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 001134567889999999999999999999975
No 282
>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI
Probab=100.00 E-value=2.3e-35 Score=309.31 Aligned_cols=266 Identities=25% Similarity=0.292 Sum_probs=200.4
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
++|+..+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|+++++.++||||+++++++.+++..++|||
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (286)
T cd07846 1 EKYENLGLVGEGSYGMVMKCKHKETGQIVAIKKFLESEDDKMVKKIAMREIRMLKQLRHENLVNLIEVFRRKKRLYLVFE 80 (286)
T ss_pred CceeEeeeeccCCCeEEEEEEECCCCCEEEEEeHhhccCcchhhHHHHHHHHHHHhcCCcchhhHHHhcccCCeEEEEEe
Confidence 46888999999999999999975 68999999876432 2234567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|++++++.++..... .+++..+..++.|+++|++||| +.+++||||+|+||++++++.++|+|||++........
T Consensus 81 ~~~~~~l~~~~~~~~-~~~~~~~~~~~~~i~~~l~~LH----~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~ 155 (286)
T cd07846 81 FVDHTVLDDLEKYPN-GLDESRVRKYLFQILRGIEFCH----SHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGE 155 (286)
T ss_pred cCCccHHHHHHhccC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCcc
Confidence 999999888776543 3899999999999999999999 67899999999999999999999999999986543322
Q ss_pred cceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHH--HhcCCChhhhcch--
Q 003855 658 SVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVK--ESLPHGLTEVVDA-- 732 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~--~~~~~~~~~~~d~-- 732 (791)
......++..|+|||+..+ ..++.++||||||+++|||++|++||...... ....+... ...........+.
T Consensus 156 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (286)
T cd07846 156 --VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDI-DQLYHIIKCLGNLIPRHQEIFQKNP 232 (286)
T ss_pred --ccCcccceeeccCcHHhccccccCchHhHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHHHhCCCchhhHHHhccch
Confidence 1223457889999998765 45788999999999999999999988642211 11111110 0000000011000
Q ss_pred --------hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 733 --------NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 733 --------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..............++..+.+++.+||+.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 282 (286)
T cd07846 233 LFAGMRLPEVKEIEPLEKRFPKLSGLVLDLAKQCLRIDPDDRPSSSQLLH 282 (286)
T ss_pred HhhccccccccCcchHHHhCCCcCHHHHHHHHHHhcCCcccchhHHHHhc
Confidence 000000000111245677899999999999999999999875
No 283
>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6. Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs
Probab=100.00 E-value=6e-35 Score=305.59 Aligned_cols=249 Identities=26% Similarity=0.334 Sum_probs=192.8
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHH-HHhccCCccceeeeeeccCCeeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEV-LRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~-l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
++|++.+.||+|+||.||+|+.+ +|+.||+|++.... ......+..|... ++..+||||+++++++..+...++|||
T Consensus 1 ~~~~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~~~~~~~~lv~e 80 (283)
T cd06617 1 DDLEVIEELGRGAYGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGALFREGDVWICME 80 (283)
T ss_pred CCceEEEEecccCCeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEEecCCcEEEEhh
Confidence 46888999999999999999975 69999999987543 2222344445554 566789999999999999999999999
Q ss_pred cCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCC-CeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 578 FMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSA-PIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 578 ~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~-~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
|++ |+|.+++.. ....+++..+..++.|++.||+||| +. +++||||||+||++++++.+||+|||+++.+.
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~ 155 (283)
T cd06617 81 VMD-TSLDKFYKKVYDKGLTIPEDILGKIAVSIVKALEYLH----SKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLV 155 (283)
T ss_pred hhc-ccHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHHHh----hcCCeecCCCCHHHEEECCCCCEEEeecccccccc
Confidence 996 688888764 2345899999999999999999999 44 89999999999999999999999999998653
Q ss_pred CCCCcceeecccccccccCCCccCC----CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhh
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSE----GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEV 729 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (791)
... ......++..|+|||.+.+ ..++.++|+|||||++|||++|+.||.........+........
T Consensus 156 ~~~---~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~~------- 225 (283)
T cd06617 156 DSV---AKTIDAGCKPYMAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDSWKTPFQQLKQVVEEPS------- 225 (283)
T ss_pred ccc---ccccccCCccccChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCccccCHHHHHHHHhcCC-------
Confidence 321 1223457889999998754 45688999999999999999999998653222111111111000
Q ss_pred cchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 730 VDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 730 ~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.+ ....++.++.+++.+||..+|++||++.|+++
T Consensus 226 --~~~--------~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~ 260 (283)
T cd06617 226 --PQL--------PAEKFSPEFQDFVNKCLKKNYKERPNYPELLQ 260 (283)
T ss_pred --CCC--------CccccCHHHHHHHHHHccCChhhCcCHHHHhc
Confidence 000 01124567889999999999999999999986
No 284
>KOG0667 consensus Dual-specificity tyrosine-phosphorylation regulated kinase [General function prediction only]
Probab=100.00 E-value=2.6e-35 Score=312.77 Aligned_cols=194 Identities=29% Similarity=0.374 Sum_probs=169.4
Q ss_pred ccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhhhHHHHHHHHHHHHHHhcc-C-----CccceeeeeeccCCeeeE
Q 003855 502 EFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQLERAFRSFDSECEVLRNVR-H-----RNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-----~niv~l~~~~~~~~~~~l 574 (791)
+|.+.+.||+|+||.|-+|.. ++++.||||+++.... ...+...|+.+|..++ | -|+|+++++|.-.++.|+
T Consensus 187 rY~V~e~LGkGtFGQVvk~~d~~T~e~VAIKIiKN~k~-f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~fr~Hlci 265 (586)
T KOG0667|consen 187 RYEVLEVLGKGSFGQVVKAYDHKTGEIVAIKIIKNKKR-FLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYFRNHLCI 265 (586)
T ss_pred EEEEEEEecccccceeEEEEecCCCcEEEEEeeccChH-HHHHHHHHHHHHHHHhccCCCCCeeEEEeeeccccccceee
Confidence 789999999999999999985 4799999999986643 3456677999999996 4 389999999999999999
Q ss_pred EEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC--CCcEEEeeeccccc
Q 003855 575 VLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE--NMAAHVSDFGISKL 651 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~--~~~~kl~Dfgla~~ 651 (791)
|+|.++ -+|.++++.+. ..++...+..|+.||++||.+|| +.+|||+||||+|||+.+ ...+||+|||.|+.
T Consensus 266 VfELL~-~NLYellK~n~f~Glsl~~ir~~~~Qil~~L~~L~----~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~ 340 (586)
T KOG0667|consen 266 VFELLS-TNLYELLKNNKFRGLSLPLVRKFAQQILTALLFLH----ELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCF 340 (586)
T ss_pred eehhhh-hhHHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeeccCChhheeeccCCcCceeEEecccccc
Confidence 999995 49999999653 45899999999999999999999 778999999999999974 34799999999987
Q ss_pred cCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCc
Q 003855 652 LGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE 706 (791)
Q Consensus 652 ~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~ 706 (791)
...... ..+.++.|+|||++.+.+|+.+.||||||||++||++|.+-|.+
T Consensus 341 ~~q~vy-----tYiQSRfYRAPEVILGlpY~~~IDmWSLGCIlAEL~tG~PLfpG 390 (586)
T KOG0667|consen 341 ESQRVY-----TYIQSRFYRAPEVILGLPYDTAIDMWSLGCILAELFTGEPLFPG 390 (586)
T ss_pred cCCcce-----eeeeccccccchhhccCCCCCccceeehhhhHHhHhcCccccCC
Confidence 654332 34568899999999999999999999999999999999877765
No 285
>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea
Probab=100.00 E-value=3.6e-35 Score=307.08 Aligned_cols=258 Identities=22% Similarity=0.316 Sum_probs=201.2
Q ss_pred ChhHHHHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeecc-
Q 003855 492 PYLDIQRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCSN- 568 (791)
Q Consensus 492 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~- 568 (791)
+..++....+.|++.+.||+|+||.||+|+.. +++.||+|++..... ....+..|+.+++++ +||||+++++++..
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~a~K~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~ 85 (282)
T cd06636 7 DLSALRDPAGIFELVEVVGNGTYGQVYKGRHVKTGQLAAIKVMDVTED-EEEEIKLEINMLKKYSHHRNIATYYGAFIKK 85 (282)
T ss_pred hhhhhcChhhhhhhheeeccCCCeEEEEEEEcCCCcEEEEEEEecChH-HHHHHHHHHHHHHHhcCCCcEEEEeeehhcc
Confidence 34445556688999999999999999999974 688999999865533 335678899999998 79999999999853
Q ss_pred -----CCeeeEEEecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEE
Q 003855 569 -----PDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAH 642 (791)
Q Consensus 569 -----~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~k 642 (791)
.+..++||||+++|+|.+++... ...+++..+..++.|++.|++||| +.+++||||+|+||++++++.++
T Consensus 86 ~~~~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~qi~~al~~LH----~~~ivH~dl~~~nili~~~~~~~ 161 (282)
T cd06636 86 SPPGHDDQLWLVMEFCGAGSVTDLVKNTKGNALKEDWIAYICREILRGLAHLH----AHKVIHRDIKGQNVLLTENAEVK 161 (282)
T ss_pred cccCCCCEEEEEEEeCCCCcHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEE
Confidence 45789999999999999999754 344788889999999999999999 67899999999999999999999
Q ss_pred EeeeccccccCCCCCcceeecccccccccCCCccC-----CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHH
Q 003855 643 VSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGS-----EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRW 717 (791)
Q Consensus 643 l~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~-----~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~ 717 (791)
|+|||++........ ......|+..|+|||.+. ...++.++|||||||++|||++|+.||....+.+... .
T Consensus 162 l~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~~~-~- 237 (282)
T cd06636 162 LVDFGVSAQLDRTVG--RRNTFIGTPYWMAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRALF-L- 237 (282)
T ss_pred EeeCcchhhhhcccc--CCCcccccccccCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhhhh-h-
Confidence 999999876532211 122346888999999865 3568889999999999999999999986532211100 0
Q ss_pred HHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 718 VKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 718 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.. ...... ....++..+.+++.+||+.||++||++.|+++
T Consensus 238 ~~~--------~~~~~~--------~~~~~~~~~~~li~~cl~~~p~~Rp~~~ell~ 278 (282)
T cd06636 238 IPR--------NPPPKL--------KSKKWSKKFIDFIEGCLVKNYLSRPSTEQLLK 278 (282)
T ss_pred Hhh--------CCCCCC--------cccccCHHHHHHHHHHhCCChhhCcCHHHHhc
Confidence 000 000000 11135567889999999999999999999875
No 286
>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with
Probab=100.00 E-value=1e-34 Score=299.00 Aligned_cols=247 Identities=26% Similarity=0.384 Sum_probs=200.3
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|+..+.||+|+||.||+|... +++.+|+|.+.... ....+.+..|+.++++++|||++++++.+...+..++||||
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~lv~e~ 80 (256)
T cd08220 1 KYEKIRVVGRGAFGIVHLCRRKADQKLVIIKQIPVEQMTKDERLAAQNECQVLKLLSHPNIIEYYENFLEDKALMIVMEY 80 (256)
T ss_pred CceEEEEecccCceEEEEEEEcCCCcEEEEEEEeccccccHHHHHHHHHHHHHhhCCCCchhheeeeEecCCEEEEEEec
Confidence 4788899999999999999864 78899999986542 33456788999999999999999999999989999999999
Q ss_pred CCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC-CcEEEeeeccccccCCCC
Q 003855 579 MPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN-MAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 579 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfgla~~~~~~~ 656 (791)
+++++|.+++... ...+++..+..++.++++|+.||| +.+++||||+|+||+++++ +.+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~lh----~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (256)
T cd08220 81 APGGTLAEYIQKRCNSLLDEDTILHFFVQILLALHHVH----TKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKS 156 (256)
T ss_pred CCCCCHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCc
Confidence 9999999999864 345899999999999999999999 6789999999999999854 468999999998764432
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
. .....++..|+|||...+..++.++||||||+++|+|++|+.||+..... ..+.........
T Consensus 157 ~---~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-----~~~~~~~~~~~~--------- 219 (256)
T cd08220 157 K---AYTVVGTPCYISPELCEGKPYNQKSDIWALGCVLYELASLKRAFEAANLP-----ALVLKIMSGTFA--------- 219 (256)
T ss_pred c---ccccccCCcccCchhccCCCCCcccchHHHHHHHHHHHhCCCCcccCchH-----HHHHHHHhcCCC---------
Confidence 2 12245788999999998888999999999999999999999998653211 111111100000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.+..++..+.+++.+||+.+|++|||+.|+++
T Consensus 220 -----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~ll~ 252 (256)
T cd08220 220 -----PISDRYSPDLRQLILSMLNLDPSKRPQLSQIMA 252 (256)
T ss_pred -----CCCCCcCHHHHHHHHHHccCChhhCCCHHHHhh
Confidence 001124566889999999999999999999986
No 287
>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re
Probab=100.00 E-value=7.5e-35 Score=301.64 Aligned_cols=250 Identities=24% Similarity=0.307 Sum_probs=195.9
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-----hHHHHHHHHHHHHHHhccCCccceeeeeeccC--Cee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-----ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP--DFK 572 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 572 (791)
.+|++.+.||+|+||.||.|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~l~~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (265)
T cd06652 2 TNWRLGKLLGQGAFGRVYLCYDADTGRELAVKQVQFDPESPETSKEVNALECEIQLLKNLLHERIVQYYGCLRDPMERTL 81 (265)
T ss_pred CcceEeeEEecCCceEEEEEEEcCCCcEEEEEEeecCcCCcccHHHHHHHHHHHHHHHhcCCCCeeeEEeEeccCCCceE
Confidence 57889999999999999999865 68999999875321 23456788899999999999999999988663 467
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++||||+++|+|.+++..... +++..+.+++.|++.||+||| +.+++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~l~~~~~-~~~~~~~~~~~~l~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~ 156 (265)
T cd06652 82 SIFMEHMPGGSIKDQLKSYGA-LTENVTRKYTRQILEGVSYLH----SNMIVHRDIKGANILRDSVGNVKLGDFGASKRL 156 (265)
T ss_pred EEEEEecCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEecCCCCEEECcCcccccc
Confidence 899999999999999986543 788889999999999999999 678999999999999999999999999999865
Q ss_pred CCCCCc-ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 653 GEGEDS-VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 653 ~~~~~~-~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
...... .......++..|+|||...+..++.++|||||||++|||++|+.||...... ....+ ...... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~~~----~~~~~~----~ 227 (265)
T cd06652 157 QTICLSGTGMKSVTGTPYWMSPEVISGEGYGRKADIWSVGCTVVEMLTEKPPWAEFEAM-AAIFK----IATQPT----N 227 (265)
T ss_pred ccccccccccccCCCCccccChhhhcCCCCCcchhHHHHHHHHHHHhhCCCCCCccchH-HHHHH----HhcCCC----C
Confidence 432111 1122235788999999988888999999999999999999999998653111 11111 000000 0
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+ ..+......+.+++.+|+. +|++||+++|+++
T Consensus 228 ~---------~~~~~~~~~~~~~i~~~l~-~p~~Rp~~~~il~ 260 (265)
T cd06652 228 P---------VLPPHVSDHCRDFLKRIFV-EAKLRPSADELLR 260 (265)
T ss_pred C---------CCchhhCHHHHHHHHHHhc-ChhhCCCHHHHhc
Confidence 0 0111234557789999985 9999999999875
No 288
>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4
Probab=100.00 E-value=6e-35 Score=302.28 Aligned_cols=252 Identities=26% Similarity=0.375 Sum_probs=202.4
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh--HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|+..+.||+|+||.||+|... +++.||+|.+..... ...+.+..|+.++++++|+||+++++++.+.+..++|+||
T Consensus 1 ~y~~~~~lg~G~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06626 1 RWQRGNKIGGGTFGKVYTAVNLDTGELMAVKEIRIQDNDPKTIKEIADEMKVLELLKHPNLVKYYGVEVHREKVYIFMEY 80 (264)
T ss_pred CceeeeEeecCCCcEEEEEEECCCCcEEEEEEEECcccchHHHHHHHHHHHHHHhCCCCChhheeeeEecCCEEEEEEec
Confidence 4778899999999999999864 789999999876543 3677899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++++|.+++.... .+++..+..++.++++|+.||| +.+++|+||+|+||++++++.+||+|||++.........
T Consensus 81 ~~~~~L~~~~~~~~-~~~~~~~~~i~~~i~~~l~~lh----~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~ 155 (264)
T cd06626 81 CSGGTLEELLEHGR-ILDEHVIRVYTLQLLEGLAYLH----SHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTT 155 (264)
T ss_pred CCCCcHHHHHhhcC-CCChHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCc
Confidence 99999999998654 3788999999999999999999 678999999999999999999999999999876543322
Q ss_pred ce--eecccccccccCCCccCCCC---CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 659 VT--QTMTMATIGYMAPEYGSEGI---VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 659 ~~--~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
.. .....++..|+|||++.+.. ++.++||||||+++||+++|+.||...... ......+......
T Consensus 156 ~~~~~~~~~~~~~~~~PE~~~~~~~~~~~~~~Dv~s~G~il~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~--------- 225 (264)
T cd06626 156 MGEEVQSLAGTPAYMAPEVITGGKGKGHGRAADIWSLGCVVLEMATGKRPWSELDNE-FQIMFHVGAGHKP--------- 225 (264)
T ss_pred ccccccCCcCCcCccChhhccCCCCCCCCcccchHHHHHHHHHHHhCCCCccCCcch-HHHHHHHhcCCCC---------
Confidence 11 11245788999999987766 889999999999999999999999753211 1111111110000
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+....++..+.+++.+||+.+|++||++.|++.
T Consensus 226 ------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~i~~ 260 (264)
T cd06626 226 ------PIPDSLQLSPEGKDFLDRCLESDPKKRPTASELLQ 260 (264)
T ss_pred ------CCCcccccCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 01111233566789999999999999999999874
No 289
>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i
Probab=100.00 E-value=2.9e-35 Score=309.50 Aligned_cols=248 Identities=22% Similarity=0.315 Sum_probs=198.6
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCC
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
|+....||+|+||.||+|... +++.||+|.+........+.+.+|+.+++.++||||+++++++..++..++|+||+++
T Consensus 23 ~~~~~~ig~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~~~~~~~~iv~e~~~~ 102 (297)
T cd06659 23 LENYIKIGEGSTGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSYLVGEELWVLMEFLQG 102 (297)
T ss_pred HHhhhhcCCCCceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhheeeCCeEEEEEecCCC
Confidence 334557999999999999865 7899999998755444456788899999999999999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
++|.+++... .+++..+..++.|++.||+||| +.+++||||||+||+++.++.++|+|||++........ ..
T Consensus 103 ~~L~~~~~~~--~~~~~~~~~~~~qi~~~L~~LH----~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~--~~ 174 (297)
T cd06659 103 GALTDIVSQT--RLNEEQIATVCESVLQALCYLH----SQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVP--KR 174 (297)
T ss_pred CCHHHHHhhc--CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccc--cc
Confidence 9999987653 3789999999999999999999 67899999999999999999999999999976543221 12
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....|+..|+|||++.+..++.++|||||||++|||++|+.||...... ..+ ..+........
T Consensus 175 ~~~~~~~~y~aPE~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~-~~~-~~~~~~~~~~~--------------- 237 (297)
T cd06659 175 KSLVGTPYWMAPEVISRTPYGTEVDIWSLGIMVIEMVDGEPPYFSDSPV-QAM-KRLRDSPPPKL--------------- 237 (297)
T ss_pred cceecCccccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH-HHH-HHHhccCCCCc---------------
Confidence 2346889999999998888999999999999999999999998642211 111 11111000000
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
......+..+.+++.+|++.+|++||++.++++.
T Consensus 238 ~~~~~~~~~l~~~i~~~l~~~P~~Rps~~~ll~~ 271 (297)
T cd06659 238 KNAHKISPVLRDFLERMLTREPQERATAQELLDH 271 (297)
T ss_pred cccCCCCHHHHHHHHHHhcCCcccCcCHHHHhhC
Confidence 0001234567799999999999999999999884
No 290
>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases. Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include
Probab=100.00 E-value=1.4e-34 Score=303.29 Aligned_cols=255 Identities=24% Similarity=0.279 Sum_probs=199.9
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeecc--CCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSN--PDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 576 (791)
++|+..+.||.|++|.||+|... +++.||+|.+.... ......+.+|++++++++||||+++++++.+ ....++||
T Consensus 1 ~~~~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~lv~ 80 (287)
T cd06621 1 EKIVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKSPYIVKYYGAFLDESSSSIGIAM 80 (287)
T ss_pred CceEEEEEeccCCceEEEEEEECCCCeEEEEEEEecCCchHHHHHHHHHHHHHHhCCCCCeeeeeeEEEccCCCeEEEEE
Confidence 46888899999999999999974 68899999987543 2345678899999999999999999998854 44689999
Q ss_pred ecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 577 EFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 577 e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
||+++++|.+++.. ....++...+..++.|++.||+||| ..+++|+||+|+||++++++.++|+|||++....
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~~~i~~~L~~lH----~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~ 156 (287)
T cd06621 81 EYCEGGSLDSIYKKVKKRGGRIGEKVLGKIAESVLKGLSYLH----SRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELV 156 (287)
T ss_pred EecCCCCHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEEecCCeEEEeecccccccc
Confidence 99999999988763 3445788999999999999999999 6789999999999999999999999999987653
Q ss_pred CCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCcccc---CcchHHHHHHHhcCCChhhhc
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFT---GEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 730 (791)
.... ....++..|+|||...+..++.++||||+||++|||++|+.||+.... .......++............
T Consensus 157 ~~~~----~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (287)
T cd06621 157 NSLA----GTFTGTSFYMAPERIQGKPYSITSDVWSLGLTLLEVAQNRFPFPPEGEPPLGPIELLSYIVNMPNPELKDEP 232 (287)
T ss_pred cccc----ccccCCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCcccCCCCChHHHHHHHhcCCchhhccCC
Confidence 2211 123467889999999888999999999999999999999999976422 111222222211100000000
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
......+..+.+++.+||+.+|++|||+.|+++
T Consensus 233 -----------~~~~~~~~~~~~li~~~l~~~p~~Rpt~~eil~ 265 (287)
T cd06621 233 -----------GNGIKWSEEFKDFIKQCLEKDPTRRPTPWDMLE 265 (287)
T ss_pred -----------CCCCchHHHHHHHHHHHcCCCcccCCCHHHHHh
Confidence 000123466889999999999999999999987
No 291
>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the
Probab=100.00 E-value=5.2e-35 Score=307.34 Aligned_cols=267 Identities=22% Similarity=0.294 Sum_probs=198.4
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh-HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE-RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|+..+.||+|+||.||+|..+ +++.||+|.+..... .....+.+|++++++++||||+++++++.+.+..++||||
T Consensus 5 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~ 84 (291)
T cd07844 5 ETYKKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDIIHTKKTLTLVFEY 84 (291)
T ss_pred cceeEEEEEeecCCeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEEecCCeEEEEEec
Confidence 67889999999999999999975 789999999865432 2234567899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
++ ++|.+++......+++..+..++.|+++||.||| +.+|+||||||+||++++++.+||+|||+++.......
T Consensus 85 ~~-~~L~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~- 158 (291)
T cd07844 85 LD-TDLKQYMDDCGGGLSMHNVRLFLFQLLRGLAYCH----QRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSK- 158 (291)
T ss_pred CC-CCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecccCCHHHEEEcCCCCEEECccccccccCCCCc-
Confidence 97 4999999876667899999999999999999999 67899999999999999999999999999875432211
Q ss_pred ceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcC---CChhhhcc---
Q 003855 659 VTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP---HGLTEVVD--- 731 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~---~~~~~~~d--- 731 (791)
......++..|+|||+..+ ..++.++||||+|+++|||++|+.||.........+......... .......+
T Consensus 159 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (291)
T cd07844 159 -TYSNEVVTLWYRPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWPGVSSNPE 237 (291)
T ss_pred -cccccccccccCCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhhhhhhccc
Confidence 1122346788999998765 558899999999999999999999996543211111111111000 00000000
Q ss_pred ---hhh--hhhHHhhHHHHHH--HHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 ---ANL--VREEQAFSAKMDC--ILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 ---~~~--~~~~~~~~~~~~~--~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
... ............. ...+.+++.+|++.+|++||++.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~~p~~Rps~~e~l~ 287 (291)
T cd07844 238 FKPYSFPFYPPRPLINHAPRLDRIPHGEELALKFLQYEPKKRISAAEAMK 287 (291)
T ss_pred cccccccccCChhHHHhCcCCCCchhHHHHHHHHhccCcccccCHHHHhc
Confidence 000 0000000000011 256789999999999999999999875
No 292
>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins. Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily
Probab=100.00 E-value=1.1e-34 Score=307.19 Aligned_cols=246 Identities=27% Similarity=0.320 Sum_probs=197.6
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
+.|+..+.||+|+||.||+|+.. +++.||+|.+.... .+..+.+.+|+++++.++||||+++.+++.+.+..++||
T Consensus 15 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~Ei~~l~~l~h~niv~~~~~~~~~~~~~lv~ 94 (307)
T cd06607 15 KLFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQQLRHPNTIEYKGCYLREHTAWLVM 94 (307)
T ss_pred hhhhhheeecCCCCeEEEEEEEcCCCcEEEEEEEeccccCcHHHHHHHHHHHHHHHhCCCCCEEEEEEEEEeCCeEEEEH
Confidence 45888899999999999999865 68999999886432 334467889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||++ |++.+++......+++..+..++.|++.||.||| +.+++||||+|+||++++++.++|+|||++.......
T Consensus 95 e~~~-g~l~~~~~~~~~~l~~~~~~~~~~ql~~~L~~LH----~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~ 169 (307)
T cd06607 95 EYCL-GSASDILEVHKKPLQEVEIAAICHGALQGLAYLH----SHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPAN 169 (307)
T ss_pred HhhC-CCHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcccEEECCCCCEEEeecCcceecCCCC
Confidence 9996 6888888765556899999999999999999999 6789999999999999999999999999997654321
Q ss_pred CcceeecccccccccCCCccC---CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 657 DSVTQTMTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
...++..|+|||++. .+.++.++||||||+++|||+||+.||........ ...+.. ... +.
T Consensus 170 ------~~~~~~~y~aPE~~~~~~~~~~~~~sDv~s~G~il~el~tg~~p~~~~~~~~~--~~~~~~---~~~-----~~ 233 (307)
T cd06607 170 ------SFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSA--LYHIAQ---NDS-----PT 233 (307)
T ss_pred ------CccCCccccCceeeeccCCCCCCcccchHHHHHHHHHHHcCCCCCCCccHHHH--HHHHhc---CCC-----CC
Confidence 235788999999863 46688999999999999999999999865321110 000000 000 00
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.....++..+.+++.+||+.+|++||++.++++.
T Consensus 234 --------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~~ 267 (307)
T cd06607 234 --------LSSNDWSDYFRNFVDSCLQKIPQDRPSSEELLKH 267 (307)
T ss_pred --------CCchhhCHHHHHHHHHHhcCChhhCcCHHHHhcC
Confidence 0011345678899999999999999999999873
No 293
>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as
Probab=100.00 E-value=1.1e-34 Score=309.01 Aligned_cols=194 Identities=23% Similarity=0.304 Sum_probs=158.9
Q ss_pred ccccCCCcceEEEEEEec---CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeec--cCCeeeEEEecCC
Q 003855 506 CNLLGTGSFGSVYKGTIS---DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCS--NPDFKALVLEFMP 580 (791)
Q Consensus 506 ~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~--~~~~~~lv~e~~~ 580 (791)
..+||+|+||.||+|+.. ++..||+|.+.... ....+.+|+.++++++||||+++++++. .....++||||++
T Consensus 6 g~~lG~G~~g~Vy~~~~~~~~~~~~~a~k~~~~~~--~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~lv~e~~~ 83 (317)
T cd07867 6 GCKVGRGTYGHVYKAKRKDGKDEKEYALKQIEGTG--ISMSACREIALLRELKHPNVIALQKVFLSHSDRKVWLLFDYAE 83 (317)
T ss_pred ceEeccCCCeeEEEEEecCCCccceEEEEEecCCC--CcHHHHHHHHHHHhCCCCCeeeEEEEEeccCCCeEEEEEeeeC
Confidence 357999999999999864 45789999886442 2245678999999999999999999884 3567789999986
Q ss_pred CCCHHHHHhhC--------CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEe----CCCCcEEEeeecc
Q 003855 581 NGSLEKWLYSH--------NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILL----DENMAAHVSDFGI 648 (791)
Q Consensus 581 ~g~L~~~l~~~--------~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill----~~~~~~kl~Dfgl 648 (791)
++|.+++... ...+++..+..++.|++.||.||| +.+|+||||||+||++ +.++.+||+|||+
T Consensus 84 -~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~~qi~~aL~~lH----~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~ 158 (317)
T cd07867 84 -HDLWHIIKFHRASKANKKPMQLPRSMVKSLLYQILDGIHYLH----ANWVLHRDLKPANILVMGEGPERGRVKIADMGF 158 (317)
T ss_pred -CcHHHHHHhhhccccCCCCccCCHHHHHHHHHHHHHHHHHHH----hCCEEcCCCCHHHEEEccCCCCCCcEEEeeccc
Confidence 5888887521 234788999999999999999999 6789999999999999 5678999999999
Q ss_pred ccccCCCCCc-ceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCc
Q 003855 649 SKLLGEGEDS-VTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDE 706 (791)
Q Consensus 649 a~~~~~~~~~-~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~ 706 (791)
++........ .......+|..|+|||++.+ ..++.++|||||||++|||+||+.||..
T Consensus 159 a~~~~~~~~~~~~~~~~~~t~~y~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~ 218 (317)
T cd07867 159 ARLFNSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHC 218 (317)
T ss_pred eeccCCCcccccccCcceecccccCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCccc
Confidence 9876543221 12233468999999998866 4589999999999999999999999865
No 294
>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi
Probab=100.00 E-value=8.4e-35 Score=305.37 Aligned_cols=243 Identities=26% Similarity=0.289 Sum_probs=198.8
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|+..+.||+|+||.||++... +++.||+|++.... .+..+.+.+|++++++++||||+++++++.++...++||
T Consensus 1 ~~y~~~~~ig~g~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~ 80 (290)
T cd05580 1 DDFEFIKTLGTGSFGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSFQDDSNLYLVM 80 (290)
T ss_pred CceEEEEEeecCCCeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEEEcCCeEEEEE
Confidence 46888999999999999999875 68999999987543 234567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||+++.++.+||+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~-~l~~~~~~~~~~qil~~l~~lH----~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~- 154 (290)
T cd05580 81 EYVPGGELFSHLRKSG-RFPEPVARFYAAQVVLALEYLH----SLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGR- 154 (290)
T ss_pred ecCCCCCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCC-
Confidence 9999999999998764 4889999999999999999999 678999999999999999999999999999876433
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
.....+++.|+|||...+..++.++||||||+++|||++|+.||..... ........ ...
T Consensus 155 ----~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~-~~~~~~~~----~~~----------- 214 (290)
T cd05580 155 ----TYTLCGTPEYLAPEIILSKGYGKAVDWWALGILIYEMLAGYPPFFDDNP-IQIYEKIL----EGK----------- 214 (290)
T ss_pred ----CCCCCCCccccChhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHh----cCC-----------
Confidence 2234578999999998888899999999999999999999999865321 11111100 000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCC-----CHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRI-----NVTDAA 773 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~ 773 (791)
...+...+..+.+++.+||..+|.+|| +++|++
T Consensus 215 ----~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~~~~~~l~ 252 (290)
T cd05580 215 ----VRFPSFFSPDAKDLIRNLLQVDLTKRLGNLKNGVNDIK 252 (290)
T ss_pred ----ccCCccCCHHHHHHHHHHccCCHHHccCcccCCHHHHH
Confidence 000112245677999999999999999 666665
No 295
>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their
Probab=100.00 E-value=1.2e-34 Score=300.79 Aligned_cols=253 Identities=25% Similarity=0.349 Sum_probs=200.4
Q ss_pred ccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh------hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 502 EFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL------ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
+|+..+.||+|+||.||+|.. .+++.||+|++.... ....+.+..|+.++++++||||+++++++.+.+..++
T Consensus 1 ~~~~~~~lg~g~~~~v~~~~~~~~~~~~alk~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~ 80 (268)
T cd06630 1 EWLKGQQLGTGAFSSCYQARDVKTGTLMAVKQVTYVRNTSSEQEEVVEALRKEIRLMARLNHPHIIRMLGATCEDSHFNL 80 (268)
T ss_pred CccccceecCcCceEEEEEEEcCCCcEEEEEEeecccCCchhHHHHHHHHHHHHHHHHHcCCCceehhhceeccCCeEEE
Confidence 477788999999999999985 478999999986432 2245678899999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC-cEEEeeeccccccC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM-AAHVSDFGISKLLG 653 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfgla~~~~ 653 (791)
||||+++++|.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++ .++|+|||.+..+.
T Consensus 81 v~e~~~~~~L~~~l~~~~-~~~~~~~~~~~~ql~~al~~LH----~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~ 155 (268)
T cd06630 81 FVEWMAGGSVSHLLSKYG-AFKEAVIINYTEQLLRGLSYLH----ENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLA 155 (268)
T ss_pred EEeccCCCcHHHHHHHhC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEEcccccccccc
Confidence 999999999999997654 4789999999999999999999 67899999999999998776 59999999998765
Q ss_pred CCCCc--ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 654 EGEDS--VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 654 ~~~~~--~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
..... .......++..|+|||...+..++.++||||+|+++|||++|+.||....... .. ..+.........
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~-~~-~~~~~~~~~~~~---- 229 (268)
T cd06630 156 AKGTGAGEFQGQLLGTIAFMAPEVLRGEQYGRSCDVWSVGCVIIEMATAKPPWNAEKHSN-HL-ALIFKIASATTA---- 229 (268)
T ss_pred cccccCCccccccccccceeCHhHhccCCCCcccchHHHHHHHHHHHhCCCCCCCCCCcc-hH-HHHHHHhccCCC----
Confidence 43211 11122357889999999888889999999999999999999999986422111 11 111110000000
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...+...+.++.+++.+|+..+|++||++.|+++
T Consensus 230 ---------~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~ll~ 263 (268)
T cd06630 230 ---------PSIPEHLSPGLRDVTLRCLELQPEDRPPSRELLK 263 (268)
T ss_pred ---------CCCchhhCHHHHHHHHHHcCCCcccCcCHHHHhc
Confidence 0011134566889999999999999999999975
No 296
>KOG4717 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-35 Score=298.65 Aligned_cols=248 Identities=22% Similarity=0.329 Sum_probs=208.0
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
..-|...+.||+|.|++|-.|++- +|..||||++.+.. .-....+.+|++.|+-++|||||+++++.......|+|.
T Consensus 17 AGLYDLekTlG~GHFAVVKLArHVFTGekVAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEViDTQTKlyLiL 96 (864)
T KOG4717|consen 17 AGLYDLEKTLGRGHFAVVKLARHVFTGEKVAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVIDTQTKLYLIL 96 (864)
T ss_pred eeeehhhhhhcCCceehhhhhhhhcccceeEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehhcccceEEEEE
Confidence 345778889999999999999843 89999999997654 334567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC-CCCcEEEeeeccccccCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD-ENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~-~~~~~kl~Dfgla~~~~~~ 655 (791)
|.-.+|+|.+||-++...+.+.-..+++.||+.|+.|+|+ ..+|||||||+||.+. .-|-||++|||++-.+.++
T Consensus 97 ELGD~GDl~DyImKHe~Gl~E~La~kYF~QI~~AI~YCHq----LHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG 172 (864)
T KOG4717|consen 97 ELGDGGDLFDYIMKHEEGLNEDLAKKYFAQIVHAISYCHQ----LHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPG 172 (864)
T ss_pred EecCCchHHHHHHhhhccccHHHHHHHHHHHHHHHHHHhh----hhhhcccCCcceeEEeeecCceEeeeccccccCCCc
Confidence 9999999999999888889999999999999999999995 4599999999999875 5789999999999877665
Q ss_pred CCcceeecccccccccCCCccCCCCCCc-cccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSEGIVSA-KCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~-~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
.. .+..+|+..|-|||++.+..|+. ++||||+|||+|-+++|+.||....+.|. +..++|-..
T Consensus 173 ~k---L~TsCGSLAYSAPEILLGDsYDAPAVDiWSLGVILyMLVCGq~PFqeANDSET-------------LTmImDCKY 236 (864)
T KOG4717|consen 173 KK---LTTSCGSLAYSAPEILLGDSYDAPAVDIWSLGVILYMLVCGQPPFQEANDSET-------------LTMIMDCKY 236 (864)
T ss_pred ch---hhcccchhhccCchhhhcCccCCcchhhhHHHHHHHHHHhCCCccccccchhh-------------hhhhhcccc
Confidence 43 34568999999999998877765 78999999999999999999987544432 122222211
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+...+.+..++|..|+.-||.+|.+.+||+.
T Consensus 237 -------tvPshvS~eCrdLI~sMLvRdPkkRAslEeI~s 269 (864)
T KOG4717|consen 237 -------TVPSHVSKECRDLIQSMLVRDPKKRASLEEIVS 269 (864)
T ss_pred -------cCchhhhHHHHHHHHHHHhcCchhhccHHHHhc
Confidence 122345667789999999999999999999864
No 297
>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is
Probab=100.00 E-value=1e-34 Score=306.31 Aligned_cols=265 Identities=25% Similarity=0.282 Sum_probs=199.7
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh-----HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE-----RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-----~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
+|+..+.||+|+||.||+|... +++.||||.+..... .....+..|++++++++||||+++++++.+....++|
T Consensus 1 ~y~~~~~lg~g~~~~vy~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv 80 (298)
T cd07841 1 RYEKGKKLGEGTYAVVYKARDKETGRIVAIKKIKLGERKEAKDGINFTALREIKLLQELKHPNIIGLLDVFGHKSNINLV 80 (298)
T ss_pred CceeeeeeeeccccEEEEEEECCCCcEEEEEEEeccccccccchhhHHHHHHHHHHhhcCCCCChhhhheeecCCEEEEE
Confidence 4778889999999999999965 689999999875432 2345667899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
|||+ +|+|.+++......+++..+..++.||++||.||| +.+++||||+|+||+++.++.++|+|||+++.....
T Consensus 81 ~e~~-~~~L~~~i~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~ 155 (298)
T cd07841 81 FEFM-ETDLEKVIKDKSIVLTPADIKSYMLMTLRGLEYLH----SNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSP 155 (298)
T ss_pred Eccc-CCCHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeecCCChhhEEEcCCCCEEEccceeeeeccCC
Confidence 9999 89999999866546899999999999999999999 678999999999999999999999999999876543
Q ss_pred CCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC---Ch-----
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH---GL----- 726 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~----- 726 (791)
.. ......++..|+|||.+.+ ..++.++|||||||++|||++|.+||...... ..+.+........ ..
T Consensus 156 ~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~e~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 232 (298)
T cd07841 156 NR--KMTHQVVTRWYRAPELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDI-DQLGKIFEALGTPTEENWPGVTS 232 (298)
T ss_pred Cc--cccccccceeeeCHHHHhCCCCCCcHHHHHHHHHHHHHHHcCCccccCCccH-HHHHHHHHHcCCCchhhhhhccc
Confidence 22 1222346788999998754 56789999999999999999998777643211 1111111100000 00
Q ss_pred -hhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 727 -TEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 727 -~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.....................+.++.+++.+||+.+|++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~e~l~ 281 (298)
T cd07841 233 LPDYVEFKPFPPTPLKQIFPAASDDALDLLQRLLTLNPNKRITARQALE 281 (298)
T ss_pred ccccccccccCCcchhhhcccccHHHHHHHHHHhcCCcccCcCHHHHhh
Confidence 000000000000000011234567889999999999999999999987
No 298
>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin. Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre
Probab=100.00 E-value=5.2e-35 Score=307.28 Aligned_cols=257 Identities=26% Similarity=0.325 Sum_probs=199.7
Q ss_pred hHHHHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeeccC--
Q 003855 494 LDIQRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCSNP-- 569 (791)
Q Consensus 494 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~-- 569 (791)
.++..++++|++.+.||+|+||.||+|... +++.+|+|++.... .....+.+|+.+++++ +|||++++++++...
T Consensus 15 ~~~~~~~~~y~~~~~l~~g~~~~vy~~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~~~ 93 (291)
T cd06639 15 ESLGDPTDTWEIIETIGKGTYGKVYKVTNKKDGSLAAVKILDPIS-DVDEEIEAEYNILQSLPNHPNVVKFYGMFYKADK 93 (291)
T ss_pred ccCCCCCCCeEEEEEeecCCCeEEEEEEECCCCCEEEEEEecccc-cHHHHHHHHHHHHHHhcCCCCeEEEEEEEEeccc
Confidence 344456788999999999999999999874 78899999886432 2235677899999998 899999999998643
Q ss_pred ---CeeeEEEecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEE
Q 003855 570 ---DFKALVLEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHV 643 (791)
Q Consensus 570 ---~~~~lv~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl 643 (791)
+..++||||+++|+|.++++. ....+++..+..++.|++.||.||| ..+++||||||+||++++++.+||
T Consensus 94 ~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~~qi~~al~~lH----~~~ivH~dlkp~nili~~~~~~kl 169 (291)
T cd06639 94 LVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYILYGALLGLQHLH----NNRIIHRDVKGNNILLTTEGGVKL 169 (291)
T ss_pred cCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEEcCCCCEEE
Confidence 358999999999999998863 3445899999999999999999999 678999999999999999999999
Q ss_pred eeeccccccCCCCCcceeecccccccccCCCccCCC-----CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHH
Q 003855 644 SDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEG-----IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWV 718 (791)
Q Consensus 644 ~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~ 718 (791)
+|||+++....... ......|+..|+|||.+... .++.++|||||||++|||++|+.||...... ..+.++.
T Consensus 170 ~dfg~~~~~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Di~slGvi~~el~~g~~p~~~~~~~-~~~~~~~ 246 (291)
T cd06639 170 VDFGVSAQLTSTRL--RRNTSVGTPFWMAPEVIACEQQYDYSYDARCDVWSLGITAIELGDGDPPLFDMHPV-KTLFKIP 246 (291)
T ss_pred eecccchhcccccc--cccCccCCccccChhhhcCCCCcccccCCccchHHHHHHHHHHhhCCCCCCCCcHH-HHHHHHh
Confidence 99999986543221 12234578899999987543 3688999999999999999999998753221 1111111
Q ss_pred HHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 719 KESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 719 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.. ......+ +......+.+++.+|++.+|++||++.|+++
T Consensus 247 ~~----~~~~~~~------------~~~~~~~l~~li~~~l~~~p~~Rps~~~il~ 286 (291)
T cd06639 247 RN----PPPTLLH------------PEKWCRSFNHFISQCLIKDFEARPSVTHLLE 286 (291)
T ss_pred cC----CCCCCCc------------ccccCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 10 0000000 1123356789999999999999999999976
No 299
>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun
Probab=100.00 E-value=1.2e-34 Score=303.18 Aligned_cols=248 Identities=23% Similarity=0.333 Sum_probs=199.3
Q ss_pred ccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 502 EFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
.|...+.||+|++|.||+|.. .+++.||+|++........+.+.+|+.+++.++||||+++++++...+..++|+||++
T Consensus 20 ~~~~~~~lg~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~~~h~~vv~~~~~~~~~~~~~~v~e~~~ 99 (285)
T cd06648 20 YLDNFVKIGEGSTGIVCIATDKSTGRQVAVKKMDLRKQQRRELLFNEVVIMRDYQHPNIVEMYSSYLVGDELWVVMEFLE 99 (285)
T ss_pred hhhcceEeccCCCeEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHHcCCCChheEEEEEEcCCeEEEEEeccC
Confidence 355567999999999999986 4788999998875554455678899999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+++|.+++... .+++..+..++.|++.|++||| +.+++||||+|+||+++.++.++++|||.+........ .
T Consensus 100 ~~~L~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH----~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~--~ 171 (285)
T cd06648 100 GGALTDIVTHT--RMNEEQIATVCLAVLKALSFLH----AQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVP--R 171 (285)
T ss_pred CCCHHHHHHhC--CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCc--c
Confidence 99999999873 4889999999999999999999 67899999999999999999999999999876533221 1
Q ss_pred eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHh
Q 003855 661 QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQA 740 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 740 (791)
.....|+..|+|||...+..++.++|||||||++|||++|+.||...... ..... +....+. ..
T Consensus 172 ~~~~~~~~~y~aPE~~~~~~~~~~~Dv~slGv~l~ell~g~~p~~~~~~~-~~~~~-~~~~~~~--------~~------ 235 (285)
T cd06648 172 RKSLVGTPYWMAPEVISRLPYGTEVDIWSLGIMVIEMVDGEPPYFNEPPL-QAMKR-IRDNLPP--------KL------ 235 (285)
T ss_pred cccccCCccccCHHHhcCCCCCCcccHHHHHHHHHHHHhCCCCCcCCCHH-HHHHH-HHhcCCC--------CC------
Confidence 22345889999999998888999999999999999999999998642111 01110 1100000 00
Q ss_pred hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 741 FSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 741 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.....++..+.+++.+||+.+|++||++.++++
T Consensus 236 -~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 268 (285)
T cd06648 236 -KNLHKVSPRLRSFLDRMLVRDPAQRATAAELLN 268 (285)
T ss_pred -cccccCCHHHHHHHHHHcccChhhCcCHHHHcc
Confidence 001124467889999999999999999999985
No 300
>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins. Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of
Probab=100.00 E-value=2.5e-34 Score=297.66 Aligned_cols=251 Identities=25% Similarity=0.316 Sum_probs=206.2
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh-HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE-RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
++|+..+.||+|++|.||+|+.. +++.||||++..... ...+.+..|+..+++++|||++++++++..+...++||||
T Consensus 1 ~~~~~~~~i~~g~~~~v~~~~~~~~~~~~~vk~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~ 80 (264)
T cd06623 1 SDLERVKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYVVKCYGAFYKEGEISIVLEY 80 (264)
T ss_pred CcceeeeeeeecCCeEEEEEEEcCCCcEEEEEEeccCcchHHHHHHHHHHHHHHhcCCCCeeeEEEEEccCCeEEEEEEe
Confidence 36888899999999999999976 599999999876543 4467889999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSS-APIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+++++|.+++... ..+++..+..++.|+++|++||| + .+++||||+|+||+++.++.++|+|||.+........
T Consensus 81 ~~~~~L~~~l~~~-~~l~~~~~~~~~~~l~~~l~~lh----~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~ 155 (264)
T cd06623 81 MDGGSLADLLKKV-GKIPEPVLAYIARQILKGLDYLH----TKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLD 155 (264)
T ss_pred cCCCcHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHh----ccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCC
Confidence 9999999999865 44899999999999999999999 6 8999999999999999999999999999987644332
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCcccc-CcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFT-GEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
. .....++..|+|||...+..++.++||||||+++|||+||+.||..... ......+++. .....
T Consensus 156 ~--~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~~~~~~~~~~~~---~~~~~--------- 221 (264)
T cd06623 156 Q--CNTFVGTVTYMSPERIQGESYSYAADIWSLGLTLLECALGKFPFLPPGQPSFFELMQAIC---DGPPP--------- 221 (264)
T ss_pred c--ccceeecccccCHhhhCCCCCCchhhHHHHHHHHHHHHhCCCCCccccccCHHHHHHHHh---cCCCC---------
Confidence 2 1233578899999999888999999999999999999999999976432 1111111111 11000
Q ss_pred hHHhhHHHHH-HHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 737 EEQAFSAKMD-CILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 737 ~~~~~~~~~~-~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..... ++..+.+++.+|++.+|++||++.|+++.
T Consensus 222 -----~~~~~~~~~~l~~li~~~l~~~p~~R~~~~~ll~~ 256 (264)
T cd06623 222 -----SLPAEEFSPEFRDFISACLQKDPKKRPSAAELLQH 256 (264)
T ss_pred -----CCCcccCCHHHHHHHHHHccCChhhCCCHHHHHhC
Confidence 00112 55678899999999999999999999874
No 301
>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex
Probab=100.00 E-value=1.3e-34 Score=303.21 Aligned_cols=264 Identities=25% Similarity=0.296 Sum_probs=197.6
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|+..+.||+|+||.||+|+.. +++.||||.+.... ......+..|++++++++||||+++++++.+.+..++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~ 80 (284)
T cd07860 1 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEF 80 (284)
T ss_pred CceeeeeecCCCceEEEEEEECCCCCEEEEEEccccccccccchHHHHHHHHHHhcCCCCCcchhhhcccCCcEEEEeec
Confidence 4788899999999999999875 78999999886543 22345788899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
+. ++|.+++... ...+++..+..++.|++.|++||| ..+++||||+|+||++++++.+|++|||+++.......
T Consensus 81 ~~-~~l~~~~~~~~~~~l~~~~~~~~~~~i~~~l~~lh----~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~ 155 (284)
T cd07860 81 LH-QDLKKFMDASPLSGIPLPLIKSYLFQLLQGLAFCH----SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR 155 (284)
T ss_pred cc-cCHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCcc
Confidence 95 6899998753 345899999999999999999999 67899999999999999999999999999976543221
Q ss_pred cceeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC--hhhhcchhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG--LTEVVDANL 734 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--~~~~~d~~~ 734 (791)
......++..|+|||+..+. .++.++|||||||++|||+||+.||..... .....+.+....... ...... .+
T Consensus 156 --~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~~l~tg~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~ 231 (284)
T cd07860 156 --TYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSE-IDQLFRIFRTLGTPDEVVWPGVT-SL 231 (284)
T ss_pred --ccccccccccccCCeEEecCCCCCcHHHHHHHHHHHHHHHHCCCCCCCCCH-HHHHHHHHHHhCCCChhhhhhhh-HH
Confidence 12223468899999987654 468899999999999999999999865321 111222221111000 000000 00
Q ss_pred hhhHH---------hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 735 VREEQ---------AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 735 ~~~~~---------~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..... ........+.++.+++.+|++.||++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 280 (284)
T cd07860 232 PDYKPSFPKWARQDFSKVVPPLDEDGRDLLSQMLHYDPNKRISAKAALA 280 (284)
T ss_pred HHHHhhcccccccCHHHHcccCCHHHHHHHHHhcCCCcccCCCHHHHhc
Confidence 00000 00001123466789999999999999999999975
No 302
>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase. Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou
Probab=100.00 E-value=1.3e-34 Score=303.37 Aligned_cols=252 Identities=24% Similarity=0.345 Sum_probs=205.6
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
..+.|+..+.||+|+||.||+|..+ ++..||+|++..... ..+.+..|++++++++|+|++++++++......++|+|
T Consensus 17 ~~~~~~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~-~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e 95 (286)
T cd06614 17 PRELYKNLEKIGEGASGEVYKATDRATGKEVAIKKMRLRKQ-NKELIINEILIMKDCKHPNIVDYYDSYLVGDELWVVME 95 (286)
T ss_pred ccccchHhHhccCCCCeEEEEEEEccCCcEEEEEEEecCch-hHHHHHHHHHHHHHCCCCCeeEEEEEEEECCEEEEEEe
Confidence 4567888899999999999999976 688999999876544 45678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|+++++|.+++......+++..+..++.+++.||+||| ..+++|+||+|+||+++.++.++|+|||++........
T Consensus 96 ~~~~~~L~~~l~~~~~~l~~~~~~~i~~~i~~~L~~lH----~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~ 171 (286)
T cd06614 96 YMDGGSLTDIITQNFVRMNEPQIAYVCREVLQGLEYLH----SQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKS 171 (286)
T ss_pred ccCCCcHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchh
Confidence 99999999999977546899999999999999999999 68899999999999999999999999999876543221
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
......++..|+|||++.+..++.++|||||||++|+|++|+.||...... .....+.. .....
T Consensus 172 --~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slGvil~~l~~g~~p~~~~~~~-~~~~~~~~----~~~~~--------- 235 (286)
T cd06614 172 --KRNSVVGTPYWMAPEVIKRKDYGPKVDIWSLGIMCIEMAEGEPPYLREPPL-RALFLITT----KGIPP--------- 235 (286)
T ss_pred --hhccccCCcccCCHhHhcCCCCCCccccHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHh----cCCCC---------
Confidence 112234778999999988888999999999999999999999998653211 11111100 00000
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
......++..+.+++.+|++.+|.+||++.++++
T Consensus 236 ---~~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~ 269 (286)
T cd06614 236 ---LKNPEKWSPEFKDFLNKCLVKDPEKRPSAEELLQ 269 (286)
T ss_pred ---CcchhhCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0111224567889999999999999999999986
No 303
>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases. Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core
Probab=100.00 E-value=1.6e-34 Score=296.82 Aligned_cols=249 Identities=28% Similarity=0.382 Sum_probs=205.0
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
+|+..+.||+|++|.||++... +++.|++|++........+.+.+|++++++++||+++++++++......++++||++
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~l~~e~~~ 80 (253)
T cd05122 1 LFEILEKIGKGGFGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSYLKKDELWIVMEFCS 80 (253)
T ss_pred CceeeeeeccCCceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEEecCCeEEEEEecCC
Confidence 4778889999999999999975 789999999977655566788999999999999999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+++|.+++......+++..+..++.+++.|+.||| ..+++||||+|+||++++++.++|+|||.+........
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh----~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~--- 153 (253)
T cd05122 81 GGSLKDLLKSTNQTLTESQIAYVCKELLKGLEYLH----SNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKA--- 153 (253)
T ss_pred CCcHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHhh----cCCEecCCCCHHHEEEccCCeEEEeecccccccccccc---
Confidence 99999999876556899999999999999999999 67899999999999999999999999999987654432
Q ss_pred eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHh
Q 003855 661 QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQA 740 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 740 (791)
.....++..|+|||+.....++.++||||||+++|+|++|+.||........ ...... ......
T Consensus 154 ~~~~~~~~~~~~PE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~--~~~~~~---~~~~~~----------- 217 (253)
T cd05122 154 RNTMVGTPYWMAPEVINGKPYDYKADIWSLGITAIELAEGKPPYSELPPMKA--LFKIAT---NGPPGL----------- 217 (253)
T ss_pred ccceecCCcccCHHHHcCCCCCccccHHHHHHHHHHHHhCCCCCCCCchHHH--HHHHHh---cCCCCc-----------
Confidence 2234578899999998888899999999999999999999999865321110 000000 000000
Q ss_pred hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 741 FSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 741 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.....++..+.+++.+|++.||++|||+.|+++
T Consensus 218 -~~~~~~~~~~~~~i~~~l~~~p~~R~t~~~~l~ 250 (253)
T cd05122 218 -RNPEKWSDEFKDFLKKCLQKNPEKRPTAEQLLK 250 (253)
T ss_pred -CcccccCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 111123566889999999999999999999975
No 304
>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I
Probab=100.00 E-value=5.5e-35 Score=304.52 Aligned_cols=252 Identities=25% Similarity=0.336 Sum_probs=199.5
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeeccCC------
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPD------ 570 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~------ 570 (791)
.+++|++.+.||+|+||.||+|..+ +++.|++|++..... ..+.+.+|+.+++++ +||||+++++++....
T Consensus 4 ~~~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~~k~~~~~~~-~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~~~~ 82 (275)
T cd06608 4 PTGIFELVEVIGEGTYGKVYKARHKKTGQLVAIKIMDIIED-EEEEIKEEYNILRKYSNHPNIATFYGAFIKKNPPGNDD 82 (275)
T ss_pred chhheeheeeecCCCCeEEEEEEECCCCcEEEEEEEecCch-hHHHHHHHHHHHHHhcCCCChheEEEEEEecCCCCcce
Confidence 4688999999999999999999975 678999999875543 346788999999999 7999999999986543
Q ss_pred eeeEEEecCCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeec
Q 003855 571 FKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFG 647 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 647 (791)
..++||||+++++|.+++... ...+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++++|||
T Consensus 83 ~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ql~~al~~lH----~~~i~H~~l~p~ni~~~~~~~~~l~d~~ 158 (275)
T cd06608 83 QLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYILRETLRGLAYLH----ENKVIHRDIKGQNILLTKNAEVKLVDFG 158 (275)
T ss_pred EEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHHHHHHHHHHHHh----cCCcccCCCCHHHEEEccCCeEEECCCc
Confidence 489999999999999998743 356899999999999999999999 6789999999999999999999999999
Q ss_pred cccccCCCCCcceeecccccccccCCCccCC-----CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc
Q 003855 648 ISKLLGEGEDSVTQTMTMATIGYMAPEYGSE-----GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL 722 (791)
Q Consensus 648 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (791)
++....... .......++..|+|||++.. ..++.++|||||||++|||++|+.||....... ...+...
T Consensus 159 ~~~~~~~~~--~~~~~~~~~~~y~aPE~~~~~~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~-~~~~~~~--- 232 (275)
T cd06608 159 VSAQLDSTL--GRRNTFIGTPYWMAPEVIACDEQPDASYDARSDVWSLGITAIELADGKPPLCDMHPMR-ALFKIPR--- 232 (275)
T ss_pred cceecccch--hhhcCccccccccCHhHhcccccccCCccccccHHHhHHHHHHHHhCCCCccccchHH-HHHHhhc---
Confidence 997654322 12233458889999997643 457889999999999999999999996432211 1111110
Q ss_pred CCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 723 PHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 723 ~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.... . ......++..+.+++.+||..||++|||+.|+++
T Consensus 233 -~~~~-----~-------~~~~~~~~~~~~~li~~~l~~dp~~Rpt~~~ll~ 271 (275)
T cd06608 233 -NPPP-----T-------LKSPENWSKKFNDFISECLIKNYEQRPFMEELLE 271 (275)
T ss_pred -cCCC-----C-------CCchhhcCHHHHHHHHHHhhcChhhCcCHHHHhc
Confidence 0000 0 0111234567889999999999999999999975
No 305
>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning
Probab=100.00 E-value=1.1e-34 Score=304.59 Aligned_cols=265 Identities=23% Similarity=0.274 Sum_probs=201.0
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
++|+..+.||+|+||.||+|..+ +++.||+|++.... ....+.+.+|++++++++||||+++++++..++..++|||
T Consensus 1 ~~y~~~~~i~~g~~~~v~~~~~~~~~~~v~vK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~iv~e 80 (288)
T cd07833 1 NKYEVLGVVGEGAYGVVLKCRNKATGEIVAIKKFKESEDDEDVKKTALREVKVLRQLRHENIVNLKEAFRRKGRLYLVFE 80 (288)
T ss_pred CceeEEEEecccCCeeEEEEEeCCCCcEEEEehhhhhcccccchhHHHHHHHHHHhcCCCCeeehhheEEECCEEEEEEe
Confidence 36888999999999999999975 68899999886542 3345678899999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|++++.+..+.... ..+++..+..++.||+.|+.||| ..+++||||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~~~l~~~~~~~-~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~ 155 (288)
T cd07833 81 YVERTLLELLEASP-GGLPPDAVRSYIWQLLQAIAYCH----SHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPA 155 (288)
T ss_pred cCCCCHHHHHHhcC-CCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCcc
Confidence 99887666655443 44899999999999999999999 67899999999999999999999999999987654332
Q ss_pred cceeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc---CCChh------
Q 003855 658 SVTQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL---PHGLT------ 727 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~---~~~~~------ 727 (791)
.......++..|+|||+..+. .++.++||||||+++|||++|+.||......+ .+.. ..... .....
T Consensus 156 -~~~~~~~~~~~~~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~ 232 (288)
T cd07833 156 -SPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDID-QLYL-IQKCLGPLPPSHQELFSSN 232 (288)
T ss_pred -ccccCcccccCCcCCchhcCCCCcCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHH-HHHHhCCCCHHHhhhcccC
Confidence 122234578899999998887 88999999999999999999999987532211 1111 11100 00000
Q ss_pred ------hhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 728 ------EVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 728 ------~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.......... .....+..++.++.+++.+||..+|++||+++++++
T Consensus 233 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~p~~Rps~~~il~ 284 (288)
T cd07833 233 PRFAGVAFPEPSQPES-LERRYPGKVSSPALDFLKACLRMDPKERLTCDELLQ 284 (288)
T ss_pred ccccccccCCCCCcHH-HHHhcCCccchHHHHHHHHHhccCchhcccHHHHhc
Confidence 0000000000 000011124678899999999999999999999875
No 306
>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3. Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int
Probab=100.00 E-value=1.4e-34 Score=301.63 Aligned_cols=248 Identities=24% Similarity=0.350 Sum_probs=201.1
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+-|+..+.||+|+||.||+|... +++.||+|++.... ....+.+.+|+.++++++||||+++++++.++...++||||
T Consensus 4 ~~~~~~~~ig~G~~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 83 (277)
T cd06641 4 ELFTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSYLKDTKLWIIMEY 83 (277)
T ss_pred HhhhhheeEeecCCeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEEEeCCeEEEEEEe
Confidence 34777889999999999999864 78899999876433 34456788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++|+|.+++... .+++..+..++.+++.|+.||| ..+++|+||+|+||+++.++.++++|||++........
T Consensus 84 ~~~~~l~~~i~~~--~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~- 156 (277)
T cd06641 84 LGGGSALDLLEPG--PLDETQIATILREILKGLDYLH----SEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQI- 156 (277)
T ss_pred CCCCcHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHc----cCCeecCCCCHHhEEECCCCCEEEeecccceecccchh-
Confidence 9999999998754 3789999999999999999999 67899999999999999999999999999976543221
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
......++..|+|||...+..++.++|||||||++|||++|..||...... .+.......... .
T Consensus 157 -~~~~~~~~~~y~~PE~~~~~~~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~-----~~~~~~~~~~~~-~--------- 220 (277)
T cd06641 157 -KRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELAKGEPPHSELHPM-----KVLFLIPKNNPP-T--------- 220 (277)
T ss_pred -hhccccCCccccChhhhccCCCCchhhHHHHHHHHHHHHcCCCCCCccchH-----HHHHHHhcCCCC-C---------
Confidence 122345788999999998888999999999999999999999998653211 111111000000 0
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
....++.++.+++.+|++.+|++||++.++++.
T Consensus 221 ----~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~~l~~ 253 (277)
T cd06641 221 ----LEGNYSKPLKEFVEACLNKEPSFRPTAKELLKH 253 (277)
T ss_pred ----CCcccCHHHHHHHHHHccCChhhCcCHHHHHhC
Confidence 011345667899999999999999999999984
No 307
>KOG0596 consensus Dual specificity; serine/threonine and tyrosine kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=2.3e-35 Score=303.47 Aligned_cols=253 Identities=23% Similarity=0.315 Sum_probs=204.1
Q ss_pred hhccccccccCCCcceEEEEEEecCCcEEEEEEeeh--hhhHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNL--QLERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~--~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 576 (791)
...|++.++||+||.+.||++...+.+.||+|.+.. ........|..|+..|.++ .|.+||++++|-..++..|+||
T Consensus 360 g~~Yeilk~iG~GGSSkV~kV~~s~~~iyalkkv~~~~~D~qtl~gy~nEI~lL~KLkg~~~IIqL~DYEv~d~~lYmvm 439 (677)
T KOG0596|consen 360 GREYEILKQIGSGGSSKVFKVLNSDKQIYALKKVVLLEADNQTLDGYRNEIALLNKLKGHDKIIQLYDYEVTDGYLYMVM 439 (677)
T ss_pred cchhhHHHhhcCCCcceeeeeecCCCcchhhhHHHHhhcCHHHHHHHHHHHHHHHHhcCCceEEEEeeeeccCceEEEEe
Confidence 357899999999999999999988888899886643 3356678899999999999 5999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||= ..||..+|++.....+...+..++.|++.|+.++| ..||||.||||.|+|+. .|.+||+|||+|..+..+.
T Consensus 440 E~G-d~DL~kiL~k~~~~~~~~~lk~ywkqML~aV~~IH----~~gIVHSDLKPANFLlV-kG~LKLIDFGIA~aI~~DT 513 (677)
T KOG0596|consen 440 ECG-DIDLNKILKKKKSIDPDWFLKFYWKQMLLAVKTIH----QHGIVHSDLKPANFLLV-KGRLKLIDFGIANAIQPDT 513 (677)
T ss_pred ecc-cccHHHHHHhccCCCchHHHHHHHHHHHHHHHHHH----HhceeecCCCcccEEEE-eeeEEeeeechhcccCccc
Confidence 976 45999999987665554488889999999999999 67899999999999986 5799999999999988877
Q ss_pred CcceeecccccccccCCCccCCCC-----------CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGI-----------VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG 725 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~-----------~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (791)
........+||+.||+||.+.... .++++||||+|||+|+|+.|+.||...... |.+
T Consensus 514 TsI~kdsQvGT~NYMsPEAl~~~~s~~~~~~~k~Ki~r~SDvWSLGCILYqMvYgktPf~~~~n~------~aK------ 581 (677)
T KOG0596|consen 514 TSIVKDSQVGTVNYMSPEALTDMSSSRENGKSKIKISRKSDVWSLGCILYQMVYGKTPFGQIINQ------IAK------ 581 (677)
T ss_pred cceeeccccCcccccCHHHHhhccccccCCCcceeecCccchhhhhhHHHHHHhcCCchHHHHHH------HHH------
Confidence 777777789999999999654432 567899999999999999999999753211 111
Q ss_pred hhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 726 LTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 726 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+..+.|+.-.-+....+.. .++.++|..||..||.+||+..++++
T Consensus 582 l~aI~~P~~~Iefp~~~~~----~~li~~mK~CL~rdPkkR~si~eLLq 626 (677)
T KOG0596|consen 582 LHAITDPNHEIEFPDIPEN----DELIDVMKCCLARDPKKRWSIPELLQ 626 (677)
T ss_pred HHhhcCCCccccccCCCCc----hHHHHHHHHHHhcCcccCCCcHHHhc
Confidence 2223333222122111111 22789999999999999999999986
No 308
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=100.00 E-value=1.2e-37 Score=322.90 Aligned_cols=368 Identities=25% Similarity=0.409 Sum_probs=274.6
Q ss_pred ccCCccccCCCCCCeeecCCCcccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCccee-cCCcc
Q 003855 3 GQIPTEIGNLQNLQYLVFAENNLSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTG-IIPHS 81 (791)
Q Consensus 3 g~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~-~~~~~ 81 (791)
|..|.++..|+.+++|.|...++. .+|+.++.+.+|++|.+++|++. ++-..+.. +|.|+.+++.+|++.. -+|..
T Consensus 22 ~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~-Lp~LRsv~~R~N~LKnsGiP~d 98 (1255)
T KOG0444|consen 22 DRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSD-LPRLRSVIVRDNNLKNSGIPTD 98 (1255)
T ss_pred CcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhcc-chhhHHHhhhccccccCCCCch
Confidence 456666666777777777766665 55666777777777777777665 44444444 5666666666666652 24455
Q ss_pred CcCCCCCCEEeccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChh
Q 003855 82 ITNATKLVALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPV 161 (791)
Q Consensus 82 ~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 161 (791)
+-.+..|+.||||+|++. ..|..+..-+++-.|+|++|+|.++|... |.+|+.|-.||||+|++. .+|+.
T Consensus 99 iF~l~dLt~lDLShNqL~-EvP~~LE~AKn~iVLNLS~N~IetIPn~l--------finLtDLLfLDLS~NrLe-~LPPQ 168 (1255)
T KOG0444|consen 99 IFRLKDLTILDLSHNQLR-EVPTNLEYAKNSIVLNLSYNNIETIPNSL--------FINLTDLLFLDLSNNRLE-MLPPQ 168 (1255)
T ss_pred hcccccceeeecchhhhh-hcchhhhhhcCcEEEEcccCccccCCchH--------HHhhHhHhhhccccchhh-hcCHH
Confidence 556666666777777666 45555666666666677777776666554 666666667777777766 34555
Q ss_pred hhhhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCccc-cccCccccCCCCCCEEEcccccCcccCCccccccCC
Q 003855 162 IGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLN-GTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKL 240 (791)
Q Consensus 162 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~-~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 240 (791)
+..+ ..|++|.|++|.+....-..+-.+++|+.|.+++.+-+ ..+|.++..+.+|..+|||.|.+. .+|+.+.++++
T Consensus 169 ~RRL-~~LqtL~Ls~NPL~hfQLrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~ 246 (1255)
T KOG0444|consen 169 IRRL-SMLQTLKLSNNPLNHFQLRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRN 246 (1255)
T ss_pred HHHH-hhhhhhhcCCChhhHHHHhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhh
Confidence 5444 34667777777665444444556788888889886543 467888999999999999999998 88999999999
Q ss_pred CceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCc-ccCCcccccCCCCCEEecC
Q 003855 241 MFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLN-DSLPSNVQKLKVLTVLDLS 319 (791)
Q Consensus 241 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~-~~~~~~~~~l~~L~~L~l~ 319 (791)
|+.|+||+|+|+ .+....+.-.+|++|+||+|+++ .+|..++.++.|+.|++.+|+++ .-+|..++++.+|+.+..+
T Consensus 247 LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avcKL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aa 324 (1255)
T KOG0444|consen 247 LRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVCKLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAA 324 (1255)
T ss_pred hheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHhhhHHHHHHHhccCcccccCCccchhhhhhhHHHHhh
Confidence 999999999998 45555666778999999999998 78999999999999999999886 3478899999999999999
Q ss_pred CcccCCCCCcchhccccccccccccccCCCCCCcccCCCCCCcEEEccCCccCCCCchhhhhcccCceEE
Q 003855 320 RNQLSGDIPSTIGALKDLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQLKQFN 389 (791)
Q Consensus 320 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~ 389 (791)
+|.+. ..|..++.+.+|+.|.|++|++- .+|+.+.-++.|+.|||..|+-.-..|..-..-++|..-+
T Consensus 325 nN~LE-lVPEglcRC~kL~kL~L~~NrLi-TLPeaIHlL~~l~vLDlreNpnLVMPPKP~da~~~lefYN 392 (1255)
T KOG0444|consen 325 NNKLE-LVPEGLCRCVKLQKLKLDHNRLI-TLPEAIHLLPDLKVLDLRENPNLVMPPKPNDARKKLEFYN 392 (1255)
T ss_pred ccccc-cCchhhhhhHHHHHhccccccee-echhhhhhcCCcceeeccCCcCccCCCCcchhhhcceeee
Confidence 99998 89999999999999999999998 7999999999999999999976534554332224454433
No 309
>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1. Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.
Probab=100.00 E-value=1.5e-34 Score=298.06 Aligned_cols=247 Identities=27% Similarity=0.334 Sum_probs=201.7
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
+|++.+.||+|+||.||+|... +++.||+|++.... ....+.+.+|++++++++||||+++++++.++...++|+|
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 80 (258)
T cd05578 1 HFELLRVIGKGAFGKVCIVQKRDTKKMFAMKYMNKQKCVEKGSVRNVLNERRILQELNHPFLVNLWYSFQDEENMYLVVD 80 (258)
T ss_pred CceEEEEeccCCCceEEEEEEccCCcEEEEEEEehhhhcchhHHHHHHHHHHHHHhCCCCChHHHHHhhcCCCeEEEEEe
Confidence 4788899999999999999975 68999999987543 2446788999999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|+++++|.+++... ..+++..+..++.|+++||.||| ..+++|+||+|+||++++++.++|+|||++.......
T Consensus 81 ~~~~~~L~~~l~~~-~~l~~~~~~~~~~~i~~~l~~lh----~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~- 154 (258)
T cd05578 81 LLLGGDLRYHLSQK-VKFSEEQVKFWICEIVLALEYLH----SKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDT- 154 (258)
T ss_pred CCCCCCHHHHHHhc-CCcCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCc-
Confidence 99999999999876 35889999999999999999999 6789999999999999999999999999998765432
Q ss_pred cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVRE 737 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 737 (791)
......|+..|+|||+..+..++.++|+||+|+++|+|++|+.||...... ...++.......
T Consensus 155 --~~~~~~~~~~y~~PE~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~---~~~~~~~~~~~~------------ 217 (258)
T cd05578 155 --LTTSTSGTPGYMAPEVLCRQGYSVAVDWWSLGVTAYECLRGKRPYRGHSRT---IRDQIRAKQETA------------ 217 (258)
T ss_pred --cccccCCChhhcCHHHHcccCCCCcccchhhHHHHHHHHhCCCCCCCCCcc---HHHHHHHHhccc------------
Confidence 122345788999999998888999999999999999999999998753221 111111111100
Q ss_pred HHhhHHHHHHHHHHHHHHhhccccCCCCCCCH--HHHH
Q 003855 738 EQAFSAKMDCILSIMDLALDCCIESPDMRINV--TDAA 773 (791)
Q Consensus 738 ~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~--~ev~ 773 (791)
....+...+..+.+++.+||+.||.+||++ +|++
T Consensus 218 --~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~l~ 253 (258)
T cd05578 218 --DVLYPATWSTEAIDAINKLLERDPQKRLGDNLKDLK 253 (258)
T ss_pred --cccCcccCcHHHHHHHHHHccCChhHcCCccHHHHh
Confidence 001111344678899999999999999999 6654
No 310
>KOG0666 consensus Cyclin C-dependent kinase CDK8 [Transcription]
Probab=100.00 E-value=9.1e-36 Score=285.43 Aligned_cols=202 Identities=25% Similarity=0.339 Sum_probs=169.4
Q ss_pred hhccccccccCCCcceEEEEEEec---C--CcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeecc-CCe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS---D--GTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSN-PDF 571 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~---~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 571 (791)
...|+.+..||+|+||.||+|.-+ + ...+|+|.++.+. ........+|+.+++.++|||++.+..++.. +..
T Consensus 23 l~~ye~ig~Ig~GTYG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~~d~~ 102 (438)
T KOG0666|consen 23 LFEYEGIGKIGRGTYGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLSHDKK 102 (438)
T ss_pred HHHhhccceecccccceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhccCce
Confidence 357899999999999999999632 2 2378999987653 2334566789999999999999999999876 778
Q ss_pred eeEEEecCCCCCHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC----CcEEE
Q 003855 572 KALVLEFMPNGSLEKWLYSH----NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN----MAAHV 643 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~----~~~kl 643 (791)
.++++||.+. ||.+.++.+ ...++...+..|+.||+.|+.||| +.=|+||||||.|||+..+ |.|||
T Consensus 103 v~l~fdYAEh-DL~~II~fHr~~~~~~lp~~mvKsilwQil~Gv~YLH----~NWvlHRDLKPaNIlvmgdgperG~VKI 177 (438)
T KOG0666|consen 103 VWLLFDYAEH-DLWHIIKFHRASKAKQLPRSMVKSILWQILDGVHYLH----SNWVLHRDLKPANILVMGDGPERGRVKI 177 (438)
T ss_pred EEEEehhhhh-hHHHHHHHhccchhccCCHHHHHHHHHHHHhhhHHHh----hhheeeccCCcceEEEeccCCccCeeEe
Confidence 8999999988 999999732 356899999999999999999999 5569999999999999866 99999
Q ss_pred eeeccccccCCCCCcc-eeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCc
Q 003855 644 SDFGISKLLGEGEDSV-TQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDE 706 (791)
Q Consensus 644 ~Dfgla~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~ 706 (791)
+|||+||.+...-... .....+.|++|+|||.+.+ ..||.+.||||.|||+.||+|-++-|.+
T Consensus 178 aDlGlaR~~~~plkpl~s~d~VVVTiWYRAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g 242 (438)
T KOG0666|consen 178 ADLGLARLFNNPLKPLASLDPVVVTIWYRAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKG 242 (438)
T ss_pred ecccHHHHhhccccccccCCceEEEEEecChHHhcccccccchhhhHHHHHHHHHHHccCccccc
Confidence 9999999986543322 3444678999999997765 6699999999999999999998877654
No 311
>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent
Probab=100.00 E-value=1.2e-34 Score=302.33 Aligned_cols=247 Identities=24% Similarity=0.370 Sum_probs=198.7
Q ss_pred ccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhcc---CCccceeeeeeccCCeeeEEE
Q 003855 502 EFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVR---HRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~~~~lv~ 576 (791)
.|+..+.||+|+||.||+|.. .+++.||+|.+.... ....+.+.+|+.++++++ |||++++++++.+....++||
T Consensus 2 ~y~~~~~l~~g~~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~~~~~~~~lv~ 81 (277)
T cd06917 2 LYQRLELIGRGAYGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSYLKGPRLWIIM 81 (277)
T ss_pred hhhhhhheeccCCceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeeeeeCCEEEEEE
Confidence 477788999999999999996 478999999986542 344567888999999996 999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++++|.+++... .+++..+..++.|++.|+.||| ..+++||||+|+||++++++.++++|||++..+....
T Consensus 82 e~~~~~~L~~~~~~~--~l~~~~~~~i~~~i~~~l~~lh----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~ 155 (277)
T cd06917 82 EYAEGGSVRTLMKAG--PIAEKYISVIIREVLVALKYIH----KVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNS 155 (277)
T ss_pred ecCCCCcHHHHHHcc--CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCc
Confidence 999999999998764 4889999999999999999999 6789999999999999999999999999998765433
Q ss_pred CcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
. ......|+..|+|||...+ ..++.++|||||||++|+|++|+.||...... .++....... .+.+.
T Consensus 156 ~--~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~~-----~~~~~~~~~~-----~~~~~ 223 (277)
T cd06917 156 S--KRSTFVGTPYWMAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDAF-----RAMMLIPKSK-----PPRLE 223 (277)
T ss_pred c--ccccccCCcceeCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCChh-----hhhhccccCC-----CCCCC
Confidence 1 2233468889999998765 44789999999999999999999999753211 1111100000 00010
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
. ..++.++.+++.+||+.||++||++.|+++
T Consensus 224 ~--------~~~~~~~~~~i~~~l~~~p~~R~~~~~il~ 254 (277)
T cd06917 224 D--------NGYSKLLREFVAACLDEEPKERLSAEELLK 254 (277)
T ss_pred c--------ccCCHHHHHHHHHHcCCCcccCcCHHHHhh
Confidence 0 014466889999999999999999999976
No 312
>KOG0607 consensus MAP kinase-interacting kinase and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=3.7e-35 Score=282.08 Aligned_cols=270 Identities=21% Similarity=0.334 Sum_probs=210.6
Q ss_pred ChhHHHHHhhccccccccCCCcceEEEEEE-ecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeeccC
Q 003855 492 PYLDIQRATDEFNECNLLGTGSFGSVYKGT-ISDGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCSNP 569 (791)
Q Consensus 492 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 569 (791)
.|.|.-+.++ +.+|+|+|+.|..++ +.+|..||||++.+..........+|++++.+. .|+||++++++|+++
T Consensus 74 ~F~d~YkLt~-----e~LGeGAyasVqtcv~i~t~~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefFEdd 148 (463)
T KOG0607|consen 74 KFEDMYKLTS-----ELLGEGAYASVQTCVSIQTGKEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFFEDD 148 (463)
T ss_pred hHHHHHHhHH-----HHhcCccceeeeeeeeeccchhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHhccc
Confidence 4566655555 489999999999887 678999999999888767777888999999998 599999999999999
Q ss_pred CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC---cEEEeee
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM---AAHVSDF 646 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~---~~kl~Df 646 (791)
...|+|||.|.||+|.++|+++.. +++.+..++.++|+.||.||| .++|+|||+||+|||-.+.. -+|||||
T Consensus 149 ~~FYLVfEKm~GGplLshI~~~~~-F~E~EAs~vvkdia~aLdFlH----~kgIAHRDlKPENiLC~~pn~vsPvKiCDf 223 (463)
T KOG0607|consen 149 TRFYLVFEKMRGGPLLSHIQKRKH-FNEREASRVVKDIASALDFLH----TKGIAHRDLKPENILCESPNKVSPVKICDF 223 (463)
T ss_pred ceEEEEEecccCchHHHHHHHhhh-ccHHHHHHHHHHHHHHHHHHh----hcCcccccCCccceeecCCCCcCceeeecc
Confidence 999999999999999999998765 889999999999999999999 78999999999999986544 3899999
Q ss_pred ccccccCCCC-----CcceeecccccccccCCCcc-----CCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHH
Q 003855 647 GISKLLGEGE-----DSVTQTMTMATIGYMAPEYG-----SEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRR 716 (791)
Q Consensus 647 gla~~~~~~~-----~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~ 716 (791)
.+..-+.... .......++|+..|||||+. ....|+.++|.||+|||+|-|+.|.+||.++-...- .
T Consensus 224 DLgSg~k~~~~~spastP~L~tPvGSAEfMAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dC---G 300 (463)
T KOG0607|consen 224 DLGSGIKLNNDCSPASTPELLTPVGSAEFMAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADC---G 300 (463)
T ss_pred ccccccccCCCCCCCCCccccCcccchhhcchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcC---C
Confidence 9875432211 12223456899999999952 235689999999999999999999999987533211 1
Q ss_pred HHHHhcCCChhhhcchhhhhhHHhhH--HHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 717 WVKESLPHGLTEVVDANLVREEQAFS--AKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 717 ~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
|-+...-+...+.+-..+++....++ .+..++.+..+++...+..|+.+|.++.+++.
T Consensus 301 WdrGe~Cr~CQ~~LFesIQEGkYeFPdkdWahIS~eakdlisnLlvrda~~rlsa~~vln 360 (463)
T KOG0607|consen 301 WDRGEVCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISNLLVRDAKQRLSAAQVLN 360 (463)
T ss_pred ccCCCccHHHHHHHHHHHhccCCcCChhhhHHhhHHHHHHHHHHHhccHHhhhhhhhccC
Confidence 21111111122222223333332222 34577888999999999999999999998876
No 313
>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin
Probab=100.00 E-value=1.7e-34 Score=307.24 Aligned_cols=252 Identities=25% Similarity=0.341 Sum_probs=200.7
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
++|+..+.||+|+||.||+|... +++.||+|.+.... ....+.+..|+++++.++||||+++++.+.+....++||
T Consensus 1 ~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~ 80 (316)
T cd05574 1 KHFKKIKLLGKGDVGRVFLVRLKGTGKLFALKVLDKKEMIKRNKVKRVLTEQEILATLDHPFLPTLYASFQTETYLCLVM 80 (316)
T ss_pred CceEEeeeecCCccEEEEEEEEcCCCcEEEEEEEeccccchHHHHHHHHHHHHHHHhCCCCCchhheeeeecCCEEEEEE
Confidence 36888999999999999999875 58999999987543 234567889999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 577 EFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 577 e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
||+.+++|.+++... ...+++..+..++.|+++||+||| +.+++||||||+||+++.++.++|+|||++......
T Consensus 81 e~~~~~~L~~~~~~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~ 156 (316)
T cd05574 81 DYCPGGELFRLLQRQPGKCLSEEVARFYAAEVLLALEYLH----LLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVE 156 (316)
T ss_pred EecCCCCHHHHHHhCCCCccCHHHHHHHHHHHHHHHHHHH----HCCeeccCCChHHeEEcCCCCEEEeecchhhccccc
Confidence 999999999999754 345899999999999999999999 678999999999999999999999999998765322
Q ss_pred CCcc---------------------------eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccc
Q 003855 656 EDSV---------------------------TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMF 708 (791)
Q Consensus 656 ~~~~---------------------------~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~ 708 (791)
.... ......|+..|+|||+..+..++.++||||||+++|+|++|+.||....
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~ 236 (316)
T cd05574 157 PPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVGTEEYIAPEVISGDGHGSAVDWWTLGILLYEMLYGTTPFKGSN 236 (316)
T ss_pred ccccccccccccccccccccchhhhcccccCCCCCCcCccCCcCHHHHcCCCCCchHHHHHHHHHHHHHhhCCCCCCCCc
Confidence 1100 0112357889999999988889999999999999999999999997532
Q ss_pred cCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCC----HHHHHH
Q 003855 709 TGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRIN----VTDAAA 774 (791)
Q Consensus 709 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt----~~ev~~ 774 (791)
.. ..+.... ... . ..+.....+..+.+++.+|+..+|++||+ +.|+++
T Consensus 237 ~~-~~~~~~~----~~~--------~-----~~~~~~~~~~~~~~li~~~l~~~p~~R~s~~~~~~~ll~ 288 (316)
T cd05574 237 RD-ETFSNIL----KKE--------V-----TFPGSPPVSSSARDLIRKLLVKDPSKRLGSKRGAAEIKQ 288 (316)
T ss_pred hH-HHHHHHh----cCC--------c-----cCCCccccCHHHHHHHHHHccCCHhHCCCchhhHHHHHc
Confidence 21 1111110 000 0 00111124567889999999999999999 555554
No 314
>KOG1035 consensus eIF-2alpha kinase GCN2 [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.1e-35 Score=328.13 Aligned_cols=255 Identities=27% Similarity=0.409 Sum_probs=193.7
Q ss_pred HHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehh-hhHHHHHHHHHHHHHHhccCCccceeeeeec--------
Q 003855 498 RATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ-LERAFRSFDSECEVLRNVRHRNLIKILSSCS-------- 567 (791)
Q Consensus 498 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~-------- 567 (791)
+-..+|++.+.||+||||.||+++.+ ||+.||||++... .......+.+|+.++++++|||||+++..+.
T Consensus 476 RY~~DFEEL~lLGkGGFG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~ 555 (1351)
T KOG1035|consen 476 RYLNDFEELELLGKGGFGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTV 555 (1351)
T ss_pred hHhhhhHHHHHhcCCCCceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCcccc
Confidence 45578999999999999999999977 9999999998655 3445667889999999999999999872110
Q ss_pred --------------------------------------------------------------------------------
Q 003855 568 -------------------------------------------------------------------------------- 567 (791)
Q Consensus 568 -------------------------------------------------------------------------------- 567 (791)
T Consensus 556 ~ei~~~~~~~~sQs~s~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~ 635 (1351)
T KOG1035|consen 556 LEIVASDSESRSQSASKYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSD 635 (1351)
T ss_pred ccccccchhhhcccCCCcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccc
Confidence
Q ss_pred ------------------------cC-------CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHc
Q 003855 568 ------------------------NP-------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHH 616 (791)
Q Consensus 568 ------------------------~~-------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~ 616 (791)
++ ...|+-||||+...+.++++.+...-.....++++++|+.||+|+|
T Consensus 636 ~e~~~~~d~~~ess~s~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLFreIlEGLaYIH- 714 (1351)
T KOG1035|consen 636 SEGSVILDDTSESSESIPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLFREILEGLAYIH- 714 (1351)
T ss_pred cCCccccCcchhhhhhccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHH-
Confidence 00 1346889999997888877765533357788999999999999999
Q ss_pred cCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC----------------CCCCcceeecccccccccCCCccCCC-
Q 003855 617 GHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG----------------EGEDSVTQTMTMATIGYMAPEYGSEG- 679 (791)
Q Consensus 617 ~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~----------------~~~~~~~~~~~~g~~~y~aPE~~~~~- 679 (791)
+.+||||||||.||++|++..|||+|||+|+... .+......+..+||.-|+|||.+.+.
T Consensus 715 ---~~giIHRDLKP~NIFLd~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalYvAPEll~~~~ 791 (1351)
T KOG1035|consen 715 ---DQGIIHRDLKPRNIFLDSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALYVAPELLSDTS 791 (1351)
T ss_pred ---hCceeeccCCcceeEEcCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeeeecHHHhcccc
Confidence 7889999999999999999999999999998721 01112245567899999999987664
Q ss_pred --CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhh
Q 003855 680 --IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALD 757 (791)
Q Consensus 680 --~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~ 757 (791)
.|+.|+|+||+|||++||+. ||....++...+...-+...+.. .+..+++. +.-..+|..
T Consensus 792 ~~~Yn~KiDmYSLGIVlFEM~y---PF~TsMERa~iL~~LR~g~iP~~-~~f~~~~~--------------~~e~slI~~ 853 (1351)
T KOG1035|consen 792 SNKYNSKIDMYSLGIVLFEMLY---PFGTSMERASILTNLRKGSIPEP-ADFFDPEH--------------PEEASLIRW 853 (1351)
T ss_pred cccccchhhhHHHHHHHHHHhc---cCCchHHHHHHHHhcccCCCCCC-cccccccc--------------hHHHHHHHH
Confidence 49999999999999999994 56654333332222222222222 12222221 223489999
Q ss_pred ccccCCCCCCCHHHHHH
Q 003855 758 CCIESPDMRINVTDAAA 774 (791)
Q Consensus 758 cl~~~P~~RPt~~ev~~ 774 (791)
+++.||.+|||+.|+++
T Consensus 854 Ll~hdP~kRPtA~eLL~ 870 (1351)
T KOG1035|consen 854 LLSHDPSKRPTATELLN 870 (1351)
T ss_pred HhcCCCccCCCHHHHhh
Confidence 99999999999999875
No 315
>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase. Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.
Probab=100.00 E-value=3.5e-34 Score=299.67 Aligned_cols=260 Identities=22% Similarity=0.235 Sum_probs=195.2
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhcc-CCccceeeeeeccC--CeeeEEEe
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVR-HRNLIKILSSCSNP--DFKALVLE 577 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~--~~~~lv~e 577 (791)
|++.+.||+|+||.||+|... +++.||+|++.... .........|+.++.++. |||++++++++.+. +..++|||
T Consensus 1 y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~~~~~lv~e 80 (282)
T cd07831 1 YKILGKIGEGTFSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFDRKTGRLALVFE 80 (282)
T ss_pred CceEeeccccccceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEecCCCCcEEEEEe
Confidence 567889999999999999864 78999999886542 222233456888888885 99999999999877 88999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|++ |++.+++......+++.++..++.|++.||.||| ..+++||||+|+||+++. +.+||+|||+++.......
T Consensus 81 ~~~-~~l~~~l~~~~~~~~~~~~~~~~~qi~~~L~~LH----~~~i~H~dl~p~ni~l~~-~~~kl~dfg~~~~~~~~~~ 154 (282)
T cd07831 81 LMD-MNLYELIKGRKRPLPEKRVKSYMYQLLKSLDHMH----RNGIFHRDIKPENILIKD-DILKLADFGSCRGIYSKPP 154 (282)
T ss_pred cCC-ccHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCceecccCHHHEEEcC-CCeEEEecccccccccCCC
Confidence 996 5899988876566899999999999999999999 678999999999999999 9999999999987643322
Q ss_pred cceeecccccccccCCCcc-CCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhh-------
Q 003855 658 SVTQTMTMATIGYMAPEYG-SEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEV------- 729 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------- 729 (791)
. ....++..|+|||+. .++.++.++||||+||++|||++|..||..... .....+...........+
T Consensus 155 ~---~~~~~~~~y~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (282)
T cd07831 155 Y---TEYISTRWYRAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNE--LDQIAKIHDVLGTPDAEVLKKFRKS 229 (282)
T ss_pred c---CCCCCCcccCChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCH--HHHHHHHHHHcCCCCHHHHHhhccc
Confidence 1 223578899999965 445678999999999999999999999965322 111222222111110000
Q ss_pred -----cchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 730 -----VDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 730 -----~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+..... .-......++.++.+++.+||+.+|++||++.|+++
T Consensus 230 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~li~~~l~~~P~~R~~~~~~l~ 278 (282)
T cd07831 230 RHMNYNFPSKKGT-GLRKLLPNASAEGLDLLKKLLAYDPDERITAKQALR 278 (282)
T ss_pred ccccccCcccccc-cHHHHcccccHHHHHHHHHHhccCcccccCHHHHhh
Confidence 00000000 000111245688999999999999999999999975
No 316
>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi
Probab=100.00 E-value=5.3e-34 Score=295.31 Aligned_cols=253 Identities=23% Similarity=0.347 Sum_probs=200.7
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeecc--CCeeeEEE
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSN--PDFKALVL 576 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--~~~~~lv~ 576 (791)
+|++.+.||.|+||.||+|... +++.||+|++.... ....+.+..|++++++++||||+++++++.. ....+++|
T Consensus 1 ~y~~~~~lg~g~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (265)
T cd08217 1 DYEVLETIGKGSFGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIIDRSNQTLYIVM 80 (265)
T ss_pred CceeeeeeccCCCeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeecCCCCEEEEEe
Confidence 4788899999999999999864 78899999886432 3445678889999999999999999997753 45678999
Q ss_pred ecCCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccC-CCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 577 EFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLHHGH-SSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 577 e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~-~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
||+++++|.+++... ...+++..+..++.|++.|++|||..+ .+.+++|+||+|+||++++++.+|++|||++...
T Consensus 81 e~~~~~~L~~~l~~~~~~~~~l~~~~~~~~~~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~ 160 (265)
T cd08217 81 EYCEGGDLAQLIQKCKKERKYIEEEFIWRILTQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKIL 160 (265)
T ss_pred hhccCCCHHHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccc
Confidence 999999999999753 456899999999999999999999321 1357999999999999999999999999999876
Q ss_pred CCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcch
Q 003855 653 GEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 653 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
..... ......++..|+|||...+..++.++||||||+++|+|++|+.||.... .....+.+.... . .
T Consensus 161 ~~~~~--~~~~~~~~~~~~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~--~~~~~~~~~~~~---~-~---- 228 (265)
T cd08217 161 GHDSS--FAKTYVGTPYYMSPEQLNHMSYDEKSDIWSLGCLIYELCALSPPFTARN--QLQLASKIKEGK---F-R---- 228 (265)
T ss_pred cCCcc--cccccccCCCccChhhhcCCCCCchhHHHHHHHHHHHHHHCCCcccCcC--HHHHHHHHhcCC---C-C----
Confidence 54332 1223458899999999988889999999999999999999999997532 111111111100 0 0
Q ss_pred hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 733 NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..+..++..+.+++.+|++.+|++||++.+|++.
T Consensus 229 ---------~~~~~~~~~~~~l~~~~l~~~p~~Rp~~~~il~~ 262 (265)
T cd08217 229 ---------RIPYRYSSELNEVIKSMLNVDPDKRPSTEELLQL 262 (265)
T ss_pred ---------CCccccCHHHHHHHHHHccCCcccCCCHHHHhhC
Confidence 0111345678899999999999999999999863
No 317
>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase
Probab=100.00 E-value=2.4e-34 Score=308.44 Aligned_cols=267 Identities=24% Similarity=0.301 Sum_probs=198.2
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccC-----Cee
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP-----DFK 572 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~ 572 (791)
.++|++.+.||+|+||.||+|+.. +|+.||+|++.... ......+..|+.++++++||||+++++++... ...
T Consensus 4 ~~~y~i~~~lg~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~~~~~ 83 (336)
T cd07849 4 GPRYQNLSYIGEGAYGMVCSATHKPTGVKVAIKKISPFEHQTFCQRTLREIKILRRFKHENIIGILDIIRPPSFESFNDV 83 (336)
T ss_pred ccceEEEEEEEecCCeEEEEEEEcCCCCeEEEEEecccccchhHHHHHHHHHHHHhCCCCCcCchhheeecccccccceE
Confidence 468999999999999999999864 78999999986432 33445678899999999999999999886543 357
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++|+||++ +++.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~--~l~~~~~~~i~~ql~~aL~~LH----~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~ 156 (336)
T cd07849 84 YIVQELME-TDLYKLIKTQ--HLSNDHIQYFLYQILRGLKYIH----SANVLHRDLKPSNLLLNTNCDLKICDFGLARIA 156 (336)
T ss_pred EEEehhcc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEECCCCCEEECcccceeec
Confidence 99999996 5888887654 3899999999999999999999 678999999999999999999999999999876
Q ss_pred CCCCCcc-eeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC----h
Q 003855 653 GEGEDSV-TQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG----L 726 (791)
Q Consensus 653 ~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~ 726 (791)
....... ......|+..|+|||.+.+ ..++.++||||+||++|||++|+.||.+... ......+....... .
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGvil~el~~G~~~f~~~~~--~~~~~~~~~~~~~~~~~~~ 234 (336)
T cd07849 157 DPEHDHTGFLTEYVATRWYRAPEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDY--LHQLNLILGVLGTPSQEDL 234 (336)
T ss_pred cccccccCCcCCcCcCCCccChHHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHHHcCCCCHHHH
Confidence 4332211 1123467899999997644 5689999999999999999999999965321 11111111111111 1
Q ss_pred hhhcchhhhhhHH------h---hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 727 TEVVDANLVREEQ------A---FSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 727 ~~~~d~~~~~~~~------~---~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..+.+........ . .......+.++.+++.+||+.+|++|||+.|+++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpt~~e~l~h 292 (336)
T cd07849 235 NCIISLRARNYIKSLPFKPKVPWNKLFPNADPKALDLLDKMLTFNPHKRITVEEALAH 292 (336)
T ss_pred HHhhchhhhhHHhhcCcCCcccHHHHhcccCcHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 1111111000000 0 00011235678899999999999999999999875
No 318
>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4. Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates
Probab=100.00 E-value=1.5e-34 Score=303.25 Aligned_cols=254 Identities=25% Similarity=0.309 Sum_probs=194.3
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhcc-CCccceeeeeeccCCeeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVR-HRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e 577 (791)
++|...+.||+|+||.||++... +++.||+|.+.... ......+..|+.++.++. ||||+++++++..+...+++||
T Consensus 4 ~~~~~~~~lg~G~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~~~~~~~~~~~e 83 (288)
T cd06616 4 EDLKDLGEIGRGAFGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGALFREGDCWICME 83 (288)
T ss_pred HHhHHHHHhCCCCceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEEecCCcEEEEEe
Confidence 35666789999999999999865 68999999986543 234567888999999996 9999999999998889999999
Q ss_pred cCCCCCHHHHH---hh-CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 578 FMPNGSLEKWL---YS-HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 578 ~~~~g~L~~~l---~~-~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
|+.. ++.++. .. ....+++..+..++.+++.||+|||+ ..+++||||||+||++++++.++|+|||+++.+.
T Consensus 84 ~~~~-~l~~l~~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lh~---~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~ 159 (288)
T cd06616 84 LMDI-SLDKFYKYVYEVLKSVIPEEILGKIAVATVKALNYLKE---ELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLV 159 (288)
T ss_pred cccC-CHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHhh---cCCeeccCCCHHHEEEccCCcEEEeecchhHHhc
Confidence 9854 655543 22 23458999999999999999999994 3489999999999999999999999999997654
Q ss_pred CCCCcceeecccccccccCCCccCCC---CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSEG---IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
.... .....|+..|+|||.+.+. .++.++|||||||++|||++|+.||..... ....+........
T Consensus 160 ~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~----~~~~~~~~~~~~~---- 228 (288)
T cd06616 160 DSIA---KTRDAGCRPYMAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWNS----VFDQLTQVVKGDP---- 228 (288)
T ss_pred cCCc---cccccCccCccCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcch----HHHHHhhhcCCCC----
Confidence 3221 1223578899999988766 689999999999999999999999865321 1111111111000
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
+.+.. .....++.++.+++.+|++.+|++|||+.||++.
T Consensus 229 -~~~~~-----~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~i~~~ 267 (288)
T cd06616 229 -PILSN-----SEEREFSPSFVNFINLCLIKDESKRPKYKELLEH 267 (288)
T ss_pred -CcCCC-----cCCCccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 00000 0112356678899999999999999999999874
No 319
>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1. Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron
Probab=100.00 E-value=5.4e-34 Score=303.02 Aligned_cols=246 Identities=27% Similarity=0.336 Sum_probs=197.6
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehh---hhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ---LERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
.|...+.||+|+||.||+|+.. ++..||+|++... ..+....+..|++++++++|||++++++++.+++..++|||
T Consensus 26 ~f~~~~~lg~G~~~~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e 105 (317)
T cd06635 26 LFTDLREIGHGSFGAVYFARDVRTNEVVAIKKMSYSGKQSNEKWQDIIKEVKFLQRIKHPNSIEYKGCYLREHTAWLVME 105 (317)
T ss_pred hhhhhheeccCCCeEEEEEEEcCCCcEEEEEEEecCCCCchHHHHHHHHHHHHHHhCCCCCEEEEEEEEeeCCeEEEEEe
Confidence 3677889999999999999864 6889999998643 23445678889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|++ |++.+.+......+++.++..++.+++.|+.||| +.+++||||+|+||+++.++.++|+|||++......
T Consensus 106 ~~~-g~l~~~~~~~~~~l~~~~~~~i~~~i~~~l~~lH----~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~-- 178 (317)
T cd06635 106 YCL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH----SHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPA-- 178 (317)
T ss_pred CCC-CCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCcccEEECCCCCEEEecCCCccccCCc--
Confidence 996 5888888766666899999999999999999999 678999999999999999999999999998765332
Q ss_pred cceeecccccccccCCCcc---CCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 658 SVTQTMTMATIGYMAPEYG---SEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~---~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
....++..|+|||++ ..+.++.++|||||||++|||++|+.||...... .....+.....+.
T Consensus 179 ----~~~~~~~~y~aPE~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~-~~~~~~~~~~~~~---------- 243 (317)
T cd06635 179 ----NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESPT---------- 243 (317)
T ss_pred ----ccccCCccccChhhhhcCCCCCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHHHHhccCCC----------
Confidence 123578899999986 3467899999999999999999999998653111 1111111110000
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
.....++..+.+++.+|++.+|++||++.|+++..
T Consensus 244 -------~~~~~~~~~l~~li~~~l~~~p~~Rpt~~~il~~~ 278 (317)
T cd06635 244 -------LQSNEWSDYFRNFVDSCLQKIPQDRPTSEELLKHM 278 (317)
T ss_pred -------CCCccccHHHHHHHHHHccCCcccCcCHHHHHhCh
Confidence 01113446688999999999999999999999754
No 320
>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the
Probab=100.00 E-value=2.6e-34 Score=302.26 Aligned_cols=263 Identities=24% Similarity=0.285 Sum_probs=199.3
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh--HHHHHHHHHHHHHHhccCCccceeeeeeccC--CeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSCSNP--DFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 574 (791)
.++|+..+.||+|+||.||+|..+ +++.||+|.++.... .....+.+|+.++++++||||+++++++... ...++
T Consensus 4 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~~~~~~~~~l 83 (293)
T cd07843 4 VDEYEKLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQHPNIVTVKEVVVGSNLDKIYM 83 (293)
T ss_pred hhhhhhhhhhcCCCCeEEEEEEECCCCcEEEEEEEeeccccccchhhHHHHHHHHHhcCCCCEEEEEEEEEecCCCcEEE
Confidence 357889999999999999999976 688999999865432 2234567899999999999999999998776 88999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||++ ++|.+++......+++..+..++.|++.||+||| +.+++||||||+||++++++.++|+|||+++....
T Consensus 84 v~e~~~-~~L~~~~~~~~~~l~~~~~~~i~~qi~~aL~~LH----~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~ 158 (293)
T cd07843 84 VMEYVE-HDLKSLMETMKQPFLQSEVKCLMLQLLSGVAHLH----DNWILHRDLKTSNLLLNNRGILKICDFGLAREYGS 158 (293)
T ss_pred EehhcC-cCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCCHHHEEECCCCcEEEeecCceeeccC
Confidence 999997 5999999876666899999999999999999999 67899999999999999999999999999987654
Q ss_pred CCCcceeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC---------
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH--------- 724 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--------- 724 (791)
... ......++..|+|||...+. .++.++|+||+|+++|||++|+.||..... .....+........
T Consensus 159 ~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 235 (293)
T cd07843 159 PLK--PYTQLVVTLWYRAPELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSE-IDQLNKIFKLLGTPTEKIWPGFS 235 (293)
T ss_pred Ccc--ccccccccccccCchhhcCCccccchhhHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchHHHHHhh
Confidence 321 12234578899999987654 468999999999999999999999875321 11111111110000
Q ss_pred --------ChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 725 --------GLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 725 --------~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.........+.. ..+. ...+..+.+++.+|++.+|++|||+.|+++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~---~~~~-~~~~~~~~~li~~~l~~~p~~R~t~~ell~ 289 (293)
T cd07843 236 ELPGAKKKTFTKYPYNQLRK---KFPA-LSLSDNGFDLLNRLLTYDPAKRISAEDALK 289 (293)
T ss_pred ccchhcccccccccchhhhc---cccc-cCCChHHHHHHHHHhccCccccCCHHHHhc
Confidence 000000000000 0000 013567889999999999999999999975
No 321
>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.
Probab=100.00 E-value=3.9e-34 Score=294.87 Aligned_cols=248 Identities=23% Similarity=0.349 Sum_probs=200.0
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|...+.||+|+||.||+|..+ +|..||+|.+.... ....+.+.+|+.+++.++||||+++++++......++|+||
T Consensus 1 ~~~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~ 80 (257)
T cd08225 1 RYEIIKKIGEGSFGKIYLAKAKSDSEHCVIKEIDLTKMPVKEKEASKKEVILLAKMKHPNIVTFFASFQENGRLFIVMEY 80 (257)
T ss_pred CceEEEEecCCCcceEEEEEEcCCCceEEEEEeeHhhccchhhHHHHHHHHHHHhCCCCChhhhhheeccCCeEEEEEec
Confidence 4778899999999999999975 68899999986542 23345778899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC-cEEEeeeccccccCCCC
Q 003855 579 MPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM-AAHVSDFGISKLLGEGE 656 (791)
Q Consensus 579 ~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~~ 656 (791)
+++++|.+++.... ..+++..+..++.|+++|+.||| +.+++|+||+|+||++++++ .+|++|||.+.......
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~ 156 (257)
T cd08225 81 CDGGDLMKRINRQRGVLFSEDQILSWFVQISLGLKHIH----DRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSM 156 (257)
T ss_pred CCCCcHHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCcccccCCHHHEEEcCCCCeEEecccccchhccCCc
Confidence 99999999997543 35799999999999999999999 67899999999999999886 46999999998765432
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
. ......|++.|+|||+..+..++.++||||||+++|||++|+.||.... ..+++...........
T Consensus 157 ~--~~~~~~~~~~~~ape~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~-----~~~~~~~~~~~~~~~~------- 222 (257)
T cd08225 157 E--LAYTCVGTPYYLSPEICQNRPYNNKTDIWSLGCVLYELCTLKHPFEGNN-----LHQLVLKICQGYFAPI------- 222 (257)
T ss_pred c--cccccCCCccccCHHHHcCCCCCchhhHHHHHHHHHHHHhCCCCCCCcc-----HHHHHHHHhcccCCCC-------
Confidence 2 1222458889999999888889999999999999999999999986432 1222222111111100
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
....+..+.+++.+|+..+|++|||+.|+++
T Consensus 223 -------~~~~~~~~~~~i~~~l~~~p~~Rpt~~~ll~ 253 (257)
T cd08225 223 -------SPNFSRDLRSLISQLFKVSPRDRPSITSILK 253 (257)
T ss_pred -------CCCCCHHHHHHHHHHhccChhhCcCHHHHhh
Confidence 0123456789999999999999999999976
No 322
>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional
Probab=100.00 E-value=1.1e-33 Score=292.69 Aligned_cols=249 Identities=22% Similarity=0.254 Sum_probs=194.4
Q ss_pred hHHHHHhhcccccccc--CCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeeccC
Q 003855 494 LDIQRATDEFNECNLL--GTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCSNP 569 (791)
Q Consensus 494 ~~~~~~~~~~~~~~~i--g~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~ 569 (791)
.+.....++|++.+.+ |+|+||.||++..+ ++..+|+|++........ |+.....+ +||||+++++++...
T Consensus 7 ~~~~~~~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~-----e~~~~~~~~~h~~iv~~~~~~~~~ 81 (267)
T PHA03390 7 SELVQFLKNCEIVKKLKLIDGKFGKVSVLKHKPTQKLFVQKIIKAKNFNAI-----EPMVHQLMKDNPNFIKLYYSVTTL 81 (267)
T ss_pred HHHHHHHHhhccccceeecCCCceEEEEEEEcCCCcEEEEEEEehhhcchh-----hHHHHHHhhcCCCEEEEEEEEecC
Confidence 3444455677887777 99999999999864 788899999865422111 22222222 799999999999999
Q ss_pred CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC-cEEEeeecc
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM-AAHVSDFGI 648 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfgl 648 (791)
+..++||||+++|+|.+++.... .+++..+..++.|+++|+.||| +.+++||||||+||+++.++ .++|+|||+
T Consensus 82 ~~~~iv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~~~l~dfg~ 156 (267)
T PHA03390 82 KGHVLIMDYIKDGDLFDLLKKEG-KLSEAEVKKIIRQLVEALNDLH----KHNIIHNDIKLENVLYDRAKDRIYLCDYGL 156 (267)
T ss_pred CeeEEEEEcCCCCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEEeCCCCeEEEecCcc
Confidence 99999999999999999998764 5899999999999999999999 67899999999999999988 999999999
Q ss_pred ccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhh
Q 003855 649 SKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTE 728 (791)
Q Consensus 649 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (791)
++...... ...++..|+|||++.+..++.++||||||+++|||++|+.||......+.....+.... ...
T Consensus 157 ~~~~~~~~------~~~~~~~y~aPE~~~~~~~~~~~DvwslG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~-~~~--- 226 (267)
T PHA03390 157 CKIIGTPS------CYDGTLDYFSPEKIKGHNYDVSFDWWAVGVLTYELLTGKHPFKEDEDEELDLESLLKRQ-QKK--- 226 (267)
T ss_pred ceecCCCc------cCCCCCcccChhhhcCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCcchhhHHHHHHhh-ccc---
Confidence 97654221 23578899999999888899999999999999999999999975433332233332211 000
Q ss_pred hcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCC-HHHHHH
Q 003855 729 VVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRIN-VTDAAA 774 (791)
Q Consensus 729 ~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt-~~ev~~ 774 (791)
.+....++..+.+++.+|++.+|++||+ ++|+++
T Consensus 227 ------------~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~l~ 261 (267)
T PHA03390 227 ------------LPFIKNVSKNANDFVQSMLKYNINYRLTNYNEIIK 261 (267)
T ss_pred ------------CCcccccCHHHHHHHHHHhccChhhCCchHHHHhc
Confidence 0011134567889999999999999996 588874
No 323
>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl
Probab=100.00 E-value=3.8e-34 Score=303.77 Aligned_cols=268 Identities=21% Similarity=0.296 Sum_probs=195.6
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCC------
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPD------ 570 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~------ 570 (791)
.++|+..+.||+|+||.||+|+.. +++.||||.+.... ......+.+|+.++++++||||+++++++....
T Consensus 11 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 90 (310)
T cd07865 11 VSKYEKLAKIGQGTFGEVFKARHKKTKQIVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPYNRY 90 (310)
T ss_pred hhheEEEEEeecCCCEEEEEEEECCCCcEEEEEEEeccCCcCCchhHHHHHHHHHHhCCCCCccceEEEEecccccccCC
Confidence 467999999999999999999975 78999999886442 222345667999999999999999999886543
Q ss_pred --eeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecc
Q 003855 571 --FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGI 648 (791)
Q Consensus 571 --~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgl 648 (791)
..++||||+. +++.+++......+++.++..++.|++.||+||| +.+++|+||||+||+++.++.+||+|||+
T Consensus 91 ~~~~~lv~e~~~-~~l~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~ 165 (310)
T cd07865 91 KGSFYLVFEFCE-HDLAGLLSNKNVKFTLSEIKKVMKMLLNGLYYIH----RNKILHRDMKAANILITKDGILKLADFGL 165 (310)
T ss_pred CceEEEEEcCCC-cCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHEEECCCCcEEECcCCC
Confidence 4499999996 5899888876656899999999999999999999 67899999999999999999999999999
Q ss_pred ccccCCCCCc--ceeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHH---hc
Q 003855 649 SKLLGEGEDS--VTQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKE---SL 722 (791)
Q Consensus 649 a~~~~~~~~~--~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~---~~ 722 (791)
+..+...... .......++..|+|||.+.+. .++.++||||||+++|||++|+.||...... .....+.. ..
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~el~t~~~~~~~~~~~--~~~~~~~~~~~~~ 243 (310)
T cd07865 166 ARAFSLSKNSKPNRYTNRVVTLWYRPPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQ--HQLTLISQLCGSI 243 (310)
T ss_pred cccccCCcccCCCCccCcccCccccCcHHhcCCcccCchhhhHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHHhCCC
Confidence 9866433221 112234578899999987654 4788999999999999999999998653221 11111111 01
Q ss_pred CCCh-hhh-----cch-hhhhhH-HhhH---HHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 723 PHGL-TEV-----VDA-NLVREE-QAFS---AKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 723 ~~~~-~~~-----~d~-~~~~~~-~~~~---~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+... ... .+. ...... .... ........+.+++.+|++.||++|||+.|+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~dli~~~l~~~P~~R~t~~e~l~ 306 (310)
T cd07865 244 TPEVWPGVDKLELFKKMELPQGQKRKVKERLKPYVKDPHALDLIDKLLVLDPAKRIDADTALN 306 (310)
T ss_pred ChhhcccccchhhhhhccCCCccchhhHHhcccccCCHHHHHHHHHHhcCChhhccCHHHHhc
Confidence 1000 000 000 000000 0000 00012345679999999999999999999975
No 324
>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the
Probab=100.00 E-value=5.1e-34 Score=303.67 Aligned_cols=268 Identities=20% Similarity=0.247 Sum_probs=197.2
Q ss_pred ccccccccCCCcceEEEEEEec---CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccC--Ceee
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS---DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP--DFKA 573 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~---~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~ 573 (791)
+|++.+.||+|+||.||+|... +++.||+|.+.... ....+.+.+|+.++++++||||+++++++.+. ...+
T Consensus 1 ~y~~~~~ig~g~~g~v~~~~~~~~~~~~~~alK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~ 80 (316)
T cd07842 1 KYEIEGCIGRGTYGRVYKAKRKNGKDGKEYAIKKFKGDKEQYTGISQSACREIALLRELKHENVVSLVEVFLEHADKSVY 80 (316)
T ss_pred CceEEEEeccCCcEEEEEEEecCCCCCCeEEEEEeccccccccCccHHHHHHHHHHHhcCCCCccceEEEEeCCCCceEE
Confidence 4778899999999999999974 47899999987633 33346678899999999999999999999887 8899
Q ss_pred EEEecCCCCCHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC----CCcEEEee
Q 003855 574 LVLEFMPNGSLEKWLYSH----NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE----NMAAHVSD 645 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~----~~~~kl~D 645 (791)
+||||+++ ++.+++... ...++...+..++.|++.||+||| +.+|+||||||+||+++. ++.+||+|
T Consensus 81 lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~i~~qi~~~l~~lH----~~~i~h~dlkp~Nil~~~~~~~~~~~kl~D 155 (316)
T cd07842 81 LLFDYAEH-DLWQIIKFHRQAKRVSIPPSMVKSLLWQILNGVHYLH----SNWVLHRDLKPANILVMGEGPERGVVKIGD 155 (316)
T ss_pred EEEeCCCc-CHHHHHHhhccCCCcCcCHHHHHHHHHHHHHHHHHHH----hCCEeeCCCCHHHEEEcCCCCccceEEECC
Confidence 99999965 777777532 225789999999999999999999 678999999999999999 99999999
Q ss_pred eccccccCCCCC-cceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCc--------chHH
Q 003855 646 FGISKLLGEGED-SVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE--------MSLR 715 (791)
Q Consensus 646 fgla~~~~~~~~-~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~--------~~~~ 715 (791)
||+++....... ........++..|+|||+..+ ..++.++|||||||++|||++|+.||....... ..+.
T Consensus 156 fg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (316)
T cd07842 156 LGLARLFNAPLKPLADLDPVVVTIWYRAPELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLE 235 (316)
T ss_pred CccccccCCCcccccccCCccccccccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHH
Confidence 999987643322 112233457889999997765 458899999999999999999999997543322 0111
Q ss_pred HHHHHhcCCC------------hhhh----cchhhhhh--HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 716 RWVKESLPHG------------LTEV----VDANLVRE--EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 716 ~~~~~~~~~~------------~~~~----~d~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.++....... .... ........ .............+.+++.+|++.||++|||+.|+++
T Consensus 236 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~eil~ 312 (316)
T cd07842 236 RIFEVLGTPTEKDWPDIKKMPEYDTLMKDFKTKTYPSNSLAKWMEKHKKPDSQGFDLLRKLLEYDPTKRITAEEALE 312 (316)
T ss_pred HHHHHhCCCchhHHHHHhhcccchhhhhhccCCCCCCccHHHHHHhccCCCHHHHHHHHHHhcCCcccCcCHHHHhc
Confidence 1111100000 0000 00000000 0000000134467889999999999999999999975
No 325
>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc
Probab=100.00 E-value=5.3e-34 Score=298.41 Aligned_cols=263 Identities=24% Similarity=0.306 Sum_probs=197.5
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
|++.+.||.|++|.||+|... +|+.||+|++.... ....+.+.+|++++++++|||++++++++.+++..++||||+
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~E~~~l~~l~~~~iv~~~~~~~~~~~~~iv~e~~ 80 (283)
T cd07835 1 YQKVEKIGEGTYGVVYKARDKLTGEIVALKKIRLETEDEGVPSTAIREISLLKELNHPNIVRLLDVVHSENKLYLVFEFL 80 (283)
T ss_pred CchheEecCCCCeEEEEEEEcCCCCEEEEEEeecccccccchhHHHHHHHHHHhcCCCCccCHhheeccCCeEEEEEecc
Confidence 567789999999999999865 79999999987543 223456788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+ ++|.+++.... ..+++..+..++.|+++||+||| +.+++||||+|+||++++++.++|+|||+++.......
T Consensus 81 ~-~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~L~~lH----~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~- 154 (283)
T cd07835 81 D-LDLKKYMDSSPLTGLDPPLIKSYLYQLLQGIAYCH----SHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVR- 154 (283)
T ss_pred C-cCHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCcc-
Confidence 5 69999998654 35899999999999999999999 67899999999999999999999999999976533221
Q ss_pred ceeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhc-----ch
Q 003855 659 VTQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVV-----DA 732 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~-----d~ 732 (791)
......++..|+|||++.+. .++.++||||||+++|||++|+.||...... ....+......... .... .+
T Consensus 155 -~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~ 231 (283)
T cd07835 155 -TYTHEVVTLWYRAPEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEI-DQLFRIFRTLGTPD-EDVWPGVTSLP 231 (283)
T ss_pred -ccCccccccCCCCCceeecCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHHhCCCC-hHHhhhhhhch
Confidence 12223568899999987654 5789999999999999999999998653211 11111111100000 0000 00
Q ss_pred hhhhh----H--HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 733 NLVRE----E--QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 733 ~~~~~----~--~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..... . .........+..+.+++.+|++.+|++|||+.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~il~ 279 (283)
T cd07835 232 DYKPTFPKWARQDLSKVVPNLDEDGLDLLSKMLVYDPAKRISAKAALQ 279 (283)
T ss_pred hhhhhcccccccchhhhcCCCCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00000 0 000111234467889999999999999999999975
No 326
>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely
Probab=100.00 E-value=6.5e-34 Score=300.75 Aligned_cols=270 Identities=24% Similarity=0.274 Sum_probs=201.0
Q ss_pred HHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCC----
Q 003855 498 RATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPD---- 570 (791)
Q Consensus 498 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~---- 570 (791)
...++|++.+.||+|+||.||+|..+ +++.||+|++.... ......+.+|++++++++||||+++++++.+..
T Consensus 4 ~~~~~~~~~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~ 83 (302)
T cd07864 4 RCVDKFDIIGQIGEGTYGQVYKARDKDTGELVALKKVRLDNEKEGFPITAIREIKILRQLNHRNIVNLKEIVTDKQDALD 83 (302)
T ss_pred hhhhhhheeeeecccCCEEEEEEEECCCCcEEEEEEEeecccccCchHHHHHHHHHHHhCCCCCeeeeeheecCcchhhh
Confidence 45678999999999999999999975 68899999987543 223356778999999999999999999987654
Q ss_pred ------eeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEe
Q 003855 571 ------FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVS 644 (791)
Q Consensus 571 ------~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~ 644 (791)
..++|+||+++ ++.+++......+++..+..++.|++.||+||| ..+|+||||||+||++++++.+||+
T Consensus 84 ~~~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~i~~qi~~aL~~LH----~~~i~H~dl~p~nili~~~~~~kl~ 158 (302)
T cd07864 84 FKKDKGAFYLVFEYMDH-DLMGLLESGLVHFSEDHIKSFMKQLLEGLNYCH----KKNFLHRDIKCSNILLNNKGQIKLA 158 (302)
T ss_pred ccccCCcEEEEEcccCc-cHHHHHhcCCCCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCcEEeC
Confidence 78999999975 888888766556899999999999999999999 6789999999999999999999999
Q ss_pred eeccccccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcC
Q 003855 645 DFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP 723 (791)
Q Consensus 645 Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~ 723 (791)
|||++........ .......++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ...+.........
T Consensus 159 dfg~~~~~~~~~~-~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~~~el~~g~~~~~~~~~-~~~~~~~~~~~~~ 236 (302)
T cd07864 159 DFGLARLYNSEES-RPYTNKVITLWYRPPELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQE-LAQLELISRLCGS 236 (302)
T ss_pred cccccccccCCcc-cccccceeccCccChHHhcCCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCC
Confidence 9999987654332 11222346778999997754 4578999999999999999999999875221 1112221111100
Q ss_pred C---Chhhh--------cchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 724 H---GLTEV--------VDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 724 ~---~~~~~--------~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
. ...++ .+...............++..+.+++.+||+.+|++||++.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rp~~~~il~ 298 (302)
T cd07864 237 PCPAVWPDVIKLPYFNTMKPKKQYRRRLREEFSFIPTPALDLLDHMLTLDPSKRCTAEEALN 298 (302)
T ss_pred CChhhcccccccccccccccccccccchhhhcCCCCHHHHHHHHHHccCChhhCCCHHHHhc
Confidence 0 00000 000000000000111134677899999999999999999999875
No 327
>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi
Probab=100.00 E-value=1.3e-33 Score=294.37 Aligned_cols=242 Identities=21% Similarity=0.284 Sum_probs=186.0
Q ss_pred ccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHH---hccCCccceeeeeeccCCeeeEEEecCC
Q 003855 508 LLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLR---NVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 508 ~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~---~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
.||+|+||.||++... +++.||+|.+.... ......+..|..+++ ..+||+|+.+.+++...+..++||||++
T Consensus 1 ~lg~G~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~ 80 (279)
T cd05633 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAFHTPDKLCFILDLMN 80 (279)
T ss_pred CcccCCCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEEecCCeEEEEEecCC
Confidence 4899999999999864 68999999886432 111223344444333 3479999999999998899999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+|+|.+++...+. +++..+..++.|++.||.||| +.+|+||||||+||++++++.++++|||++.......
T Consensus 81 ~~~L~~~i~~~~~-l~~~~~~~i~~qi~~al~~lH----~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~---- 151 (279)
T cd05633 81 GGDLHYHLSQHGV-FSEKEMRFYATEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (279)
T ss_pred CCCHHHHHHhcCC-CCHHHHHHHHHHHHHHHHHHH----HCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccC----
Confidence 9999999876543 899999999999999999999 6789999999999999999999999999997653322
Q ss_pred eecccccccccCCCccC-CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 661 QTMTMATIGYMAPEYGS-EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
.....|+..|+|||... +..++.++||||+||++|||++|..||.......... +...... ...
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~---~~~~~~~-----~~~------- 216 (279)
T cd05633 152 PHASVGTHGYMAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHE---IDRMTLT-----VNV------- 216 (279)
T ss_pred ccCcCCCcCccCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCCCCcCHHH---HHHHhhc-----CCc-------
Confidence 12245899999999876 4568899999999999999999999997543221111 1100000 000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRI-----NVTDAAAK 775 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~~ 775 (791)
..+..++.++.+++.+|++.||++|| +++|+++.
T Consensus 217 --~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~~~~h 255 (279)
T cd05633 217 --ELPDSFSPELKSLLEGLLQRDVSKRLGCLGRGAQEVKEH 255 (279)
T ss_pred --CCccccCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHhC
Confidence 01123456788999999999999999 59888774
No 328
>KOG4645 consensus MAPKKK (MAP kinase kinase kinase) SSK2 and related serine/threonine protein kinases [Signal transduction mechanisms]
Probab=100.00 E-value=6.3e-36 Score=335.13 Aligned_cols=255 Identities=25% Similarity=0.354 Sum_probs=202.5
Q ss_pred HHHhhccccccccCCCcceEEEEEE-ecCCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeee
Q 003855 497 QRATDEFNECNLLGTGSFGSVYKGT-ISDGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 497 ~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~ 573 (791)
+..+-+|+....||.|.||.||.|. .++|.-.|+|-+.... ....+.+.+|+.++..++|||+|+.+|+-...+..+
T Consensus 1231 snV~~rWqrg~~Ig~G~fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVEvHRekv~ 1310 (1509)
T KOG4645|consen 1231 SNVTFRWQRGNFIGGGTFGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVEVHREKVY 1310 (1509)
T ss_pred ccceeeeccccccCCcceeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCceeecHHHHH
Confidence 4445678888999999999999998 4578889999776554 445567889999999999999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
+.||||++|+|.+.+...+ ..++.....+..|++.|++||| +.+||||||||.||+++.+|.+|++|||.|..+.
T Consensus 1311 IFMEyC~~GsLa~ll~~gr-i~dE~vt~vyt~qll~gla~LH----~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~ 1385 (1509)
T KOG4645|consen 1311 IFMEYCEGGSLASLLEHGR-IEDEMVTRVYTKQLLEGLAYLH----EHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIK 1385 (1509)
T ss_pred HHHHHhccCcHHHHHHhcc-hhhhhHHHHHHHHHHHHHHHHH----hcCceecCCCccceeeecCCcEEeecccceeEec
Confidence 9999999999999887544 2566666678889999999999 6799999999999999999999999999998876
Q ss_pred CCCCcc--eeecccccccccCCCccCCC---CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhh
Q 003855 654 EGEDSV--TQTMTMATIGYMAPEYGSEG---IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTE 728 (791)
Q Consensus 654 ~~~~~~--~~~~~~g~~~y~aPE~~~~~---~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (791)
...... .....+||+-|||||++.+. ....+.||||+|||+.||+||++||......-.-+......+.|+
T Consensus 1386 ~~~~~~~~el~~~~GT~~YMAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq---- 1461 (1509)
T KOG4645|consen 1386 NNAQTMPGELQSMMGTPMYMAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQ---- 1461 (1509)
T ss_pred CchhcCCHHHHhhcCCchhcCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCC----
Confidence 543221 22334799999999987653 355689999999999999999999987543322222211122221
Q ss_pred hcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 729 VVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 729 ~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.++..+.+-.+++.+|+..||++|.++.|+++
T Consensus 1462 --------------~P~~ls~~g~dFle~Cl~~dP~~Rw~~~qlle 1493 (1509)
T KOG4645|consen 1462 --------------IPERLSSEGRDFLEHCLEQDPKMRWTASQLLE 1493 (1509)
T ss_pred --------------CchhhhHhHHHHHHHHHhcCchhhhHHHHHHH
Confidence 11224455679999999999999999987765
No 329
>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase. Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK
Probab=100.00 E-value=1.1e-33 Score=291.86 Aligned_cols=251 Identities=26% Similarity=0.345 Sum_probs=204.5
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccC--CeeeEEE
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP--DFKALVL 576 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~ 576 (791)
+|+..+.||+|++|.||+|... +++.|++|++.... ....+.+.+|+.++++++||||+++++++.+. ...++|+
T Consensus 1 ~~~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~ 80 (260)
T cd06606 1 EWTRGELLGRGSFGSVYLALDKDTGELMAVKSVELSGDSEEELEALEREIRILSSLQHPNIVRYYGSERDEEKNTLNIFL 80 (260)
T ss_pred CceeeeEeeecCceEEEEEEECCCCcEEEEEEeeccccchHHHHHHHHHHHHHHHcCCCCEeeEEEEEecCCCCeEEEEE
Confidence 4677889999999999999976 78999999987654 24567889999999999999999999999888 8899999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+++++|.+++.... .+++..+..++.+++.|++||| +.+++|+||+|+||+++.++.++|+|||.+.......
T Consensus 81 e~~~~~~L~~~~~~~~-~~~~~~~~~~~~~l~~~l~~lh----~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~ 155 (260)
T cd06606 81 EYVSGGSLSSLLKKFG-KLPEPVIRKYTRQILEGLAYLH----SNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIE 155 (260)
T ss_pred EecCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCccccCCCHHHEEEcCCCCEEEcccccEEeccccc
Confidence 9999999999998765 5899999999999999999999 6789999999999999999999999999998775543
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
.........++..|+|||...+..++.++||||||+++|+|++|..||..... ...............
T Consensus 156 ~~~~~~~~~~~~~y~~pE~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~---~~~~~~~~~~~~~~~--------- 223 (260)
T cd06606 156 TGEGTGSVRGTPYWMAPEVIRGEEYGRAADIWSLGCTVIEMATGKPPWSELGN---PMAALYKIGSSGEPP--------- 223 (260)
T ss_pred ccccccCCCCCccccCHhhhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCc---hHHHHHhccccCCCc---------
Confidence 21112334678899999999888899999999999999999999999876431 111100000000000
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+...+..+.+++.+|++.+|++||++.|+++
T Consensus 224 -----~~~~~~~~~l~~~i~~~l~~~p~~Rp~~~~ll~ 256 (260)
T cd06606 224 -----EIPEHLSEEAKDFLRKCLRRDPKKRPTADELLQ 256 (260)
T ss_pred -----CCCcccCHHHHHHHHHhCcCChhhCCCHHHHhh
Confidence 011123567889999999999999999999975
No 330
>KOG4250 consensus TANK binding protein kinase TBK1 [Signal transduction mechanisms]
Probab=100.00 E-value=1.3e-34 Score=307.72 Aligned_cols=274 Identities=27% Similarity=0.342 Sum_probs=203.9
Q ss_pred ccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhccCCccceeeeeeccC------Ceee
Q 003855 502 EFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP------DFKA 573 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------~~~~ 573 (791)
.|...+.||+|+||.||+|+. .+|+.||||.+.... ....+..-+|++++++++|||||++++.-++. +...
T Consensus 14 ~W~~~e~LG~Ga~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~~~~~~~~~v 93 (732)
T KOG4250|consen 14 LWEMDERLGKGAFGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKFLGLVTRLPV 93 (732)
T ss_pred ceeehhhhcCCccceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccccCcccccce
Confidence 355667899999999999995 489999999987643 33456678899999999999999999986543 4668
Q ss_pred EEEecCCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC--CCC--cEEEeeec
Q 003855 574 LVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD--ENM--AAHVSDFG 647 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~--~~~--~~kl~Dfg 647 (791)
+|||||.+|||...+.+. ...+++.+...++.+++.||.||| ..+|+||||||.||++- ++| .-||+|||
T Consensus 94 lvmEyC~gGsL~~~L~~PEN~~GLpE~e~l~lL~d~~~al~~Lr----En~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG 169 (732)
T KOG4250|consen 94 LVMEYCSGGSLRKVLNSPENAYGLPESEFLDLLSDLVSALRHLR----ENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFG 169 (732)
T ss_pred EEEeecCCCcHHHHhcCcccccCCCHHHHHHHHHHHHHHHHHHH----HcCceeccCCCCcEEEeecCCCceEEeeeccc
Confidence 999999999999999854 456999999999999999999999 67899999999999984 334 37999999
Q ss_pred cccccCCCCCcceeecccccccccCCCccC-CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchH-HHHHHHh-cCC
Q 003855 648 ISKLLGEGEDSVTQTMTMATIGYMAPEYGS-EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSL-RRWVKES-LPH 724 (791)
Q Consensus 648 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~-~~~~~~~-~~~ 724 (791)
.|+.+.++. .....+||..|.+||... .+.|+..+|.|||||++||++||..||.......... ..|..-. .+.
T Consensus 170 ~Arel~d~s---~~~S~vGT~~YLhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p~~~pk~~~~~~~~~~tkkp~ 246 (732)
T KOG4250|consen 170 AARELDDNS---LFTSLVGTEEYLHPELYERQKKYTATVDLWSFGVTLYECATGELPFIPFGGPKNNKEIMWHIITKKPS 246 (732)
T ss_pred ccccCCCCC---eeeeecCchhhcChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCcCCCccccchhhhhhhccCCC
Confidence 999886544 456678999999999888 5889999999999999999999999997643332111 1111111 111
Q ss_pred ChhhhcchhhhhhH---HhhHHH----HHHHHHHHHHHhhccccCCCCCC--CHHHHHHHHHHHHHH
Q 003855 725 GLTEVVDANLVREE---QAFSAK----MDCILSIMDLALDCCIESPDMRI--NVTDAAAKLKKIKVK 782 (791)
Q Consensus 725 ~~~~~~d~~~~~~~---~~~~~~----~~~~~~l~~li~~cl~~~P~~RP--t~~ev~~~L~~~~~~ 782 (791)
+..-...+...+.. ..++.+ ......+..++..++..+|++|. .+.+....+..|...
T Consensus 247 ~v~i~~~~~eNgpv~~s~~lP~p~~Ls~~l~~~~~kwLa~~L~~~~~~~~~~~~~~~Fa~~~dIL~~ 313 (732)
T KOG4250|consen 247 GVAIGAQEEENGPVEWSSTLPQPNHLSRGLATRLTKWLASMLEWNPRKRGHEGFDRFFAEVDDILNL 313 (732)
T ss_pred ceeEeeecccCCceeeeccCCCcccccHHHHhhhhHHHHHHHhhhHHHhCCCCcchHHHHHHHHHhh
Confidence 11111111111000 011111 12234466788889999999999 777777777666443
No 331
>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase. Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK
Probab=100.00 E-value=1.3e-33 Score=304.88 Aligned_cols=264 Identities=22% Similarity=0.244 Sum_probs=197.5
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehh--hhHHHHHHHHHHHHHHhccCCccceeeeeeccC------
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSCSNP------ 569 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 569 (791)
..++|+..+.||+|+||.||+|... +++.||+|++... .......+.+|+.++++++||||+++++++...
T Consensus 14 ~~~~y~~~~~lg~g~~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~ 93 (353)
T cd07850 14 VLKRYQNLKPIGSGAQGIVCAAYDTVTGQNVAIKKLSRPFQNVTHAKRAYRELVLMKLVNHKNIIGLLNVFTPQKSLEEF 93 (353)
T ss_pred hhcceEEEEEeccCCCEEEEEEEECCCCCEEEEEecCccccChhHHHHHHHHHHHHHhcCCCCCcceeeeeccCCCcccc
Confidence 4578999999999999999999864 7899999998643 223345677899999999999999999987543
Q ss_pred CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
...++||||+. ++|.+.+... ++...+..++.|++.||+||| ..+|+||||||+||++++++.+||+|||++
T Consensus 94 ~~~~lv~e~~~-~~l~~~~~~~---l~~~~~~~~~~ql~~aL~~LH----~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~ 165 (353)
T cd07850 94 QDVYLVMELMD-ANLCQVIQMD---LDHERMSYLLYQMLCGIKHLH----SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 165 (353)
T ss_pred CcEEEEEeccC-CCHHHHHhhc---CCHHHHHHHHHHHHHHHHHHH----hCCeeeCCCCHHHEEECCCCCEEEccCccc
Confidence 35799999995 5898888643 788899999999999999999 678999999999999999999999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC---h
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG---L 726 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~---~ 726 (791)
+....... .....++..|+|||.+.+..++.++|||||||++|+|++|+.||...... ..+...+. ..... .
T Consensus 166 ~~~~~~~~---~~~~~~~~~y~aPE~~~~~~~~~~~DvwslG~~l~~l~~g~~pf~~~~~~-~~~~~~~~-~~~~~~~~~ 240 (353)
T cd07850 166 RTAGTSFM---MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIRGTVLFPGTDHI-DQWNKIIE-QLGTPSDEF 240 (353)
T ss_pred eeCCCCCC---CCCCcccccccCHHHHhCCCCCCchhhHhHHHHHHHHHHCCCCCCCCCHH-HHHHHHHH-hcCCCCHHH
Confidence 87643221 22235788999999999889999999999999999999999998653211 11111111 00000 0
Q ss_pred hhhcchhhhhh--------H--------------HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 727 TEVVDANLVRE--------E--------------QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 727 ~~~~d~~~~~~--------~--------------~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.+.++...... . .........+..+.+++.+|++.||++|||+.|+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~eiL~~ 311 (353)
T cd07850 241 MSRLQPTVRNYVENRPKYAGYSFEELFPDVLFPPDSESHNKLKASQARDLLSKMLVIDPEKRISVDDALQH 311 (353)
T ss_pred HHHhhhhhhHHhhcCCCCCCcchhhhCcccccCcccccccccchhHHHHHHHHHcCCChhhCcCHHHHhcC
Confidence 00000000000 0 0000011235668899999999999999999999853
No 332
>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10. Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing
Probab=100.00 E-value=5.7e-34 Score=302.01 Aligned_cols=266 Identities=23% Similarity=0.258 Sum_probs=197.9
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh--HHHHHHHHHHHHHHhccCCccceeeeeeccC--CeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSCSNP--DFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~l 574 (791)
.++|++.+.||+|+||.||+|... +|+.||+|++..... .....+.+|+.++++++||||+++++++.+. +..++
T Consensus 6 ~~~y~~~~~ig~g~~~~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~l 85 (309)
T cd07845 6 VTEFEKLNRIGEGTYGIVYRARDTTSGEIVALKKVRMDNERDGIPISSLREITLLLNLRHPNIVELKEVVVGKHLDSIFL 85 (309)
T ss_pred ccceeEeeeeeecCCEEEEEEEECCCCcEEEEEEEEeccCCCCCcchhhHHHHHHHhCCCCCCcceEEEEecCCCCeEEE
Confidence 468999999999999999999975 689999999864432 2233456799999999999999999998654 56899
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||++ ++|.+++......+++.++..++.|+++|++||| +.+++||||||+||++++++.+||+|||++.....
T Consensus 86 v~e~~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~~l~~lH----~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~ 160 (309)
T cd07845 86 VMEYCE-QDLASLLDNMPTPFSESQVKCLMLQLLRGLQYLH----ENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGL 160 (309)
T ss_pred EEecCC-CCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECccceeeecCC
Confidence 999996 5899998866566899999999999999999999 67899999999999999999999999999987654
Q ss_pred CCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhh----h
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTE----V 729 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~ 729 (791)
... ......++..|+|||.+.+ ..++.++||||+||++|||++|+.||...... .....+.......... .
T Consensus 161 ~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~~f~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 236 (309)
T cd07845 161 PAK--PMTPKVVTLWYRAPELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEI--EQLDLIIQLLGTPNESIWPGF 236 (309)
T ss_pred ccC--CCCcccccccccChhhhcCCCCcCchHHHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHHHhcCCCChhhchhh
Confidence 321 1222345788999998765 55889999999999999999999999753221 1111111111100000 0
Q ss_pred cc------hhhhhhHH-h-hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 730 VD------ANLVREEQ-A-FSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 730 ~d------~~~~~~~~-~-~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.+ ..+..... . .......++.+.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~ml~~dp~~R~t~~~il~ 289 (309)
T cd07845 237 SDLPLVGKFTLPKQPYNNLKHKFPWLSEAGLRLLNFLLMYDPKKRATAEEALE 289 (309)
T ss_pred hcccccccccccCCCCCchHHhccccCHHHHHHHHHHhcCChhhCcCHHHHhc
Confidence 00 00000000 0 0001123567789999999999999999999985
No 333
>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7. Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it
Probab=100.00 E-value=7.3e-34 Score=299.19 Aligned_cols=253 Identities=22% Similarity=0.275 Sum_probs=196.0
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 576 (791)
.++|++.+.||+|+||.||+|..+ +++.||||++.... ......+..|+.++.+. .||||+++++++.+....++||
T Consensus 14 ~~~~~~~~~lg~g~~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~ 93 (296)
T cd06618 14 LNDLENLGEIGSGTCGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYFITDSDVFICM 93 (296)
T ss_pred cchheeeeEeeccCCeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheeeecCCeEEEEe
Confidence 367888999999999999999986 48999999987543 23345566677777666 4999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||++ +++.+++......+++..+..++.|+++|++|||+ ..+|+||||+|+||++++++.+||+|||++..+....
T Consensus 94 e~~~-~~l~~l~~~~~~~l~~~~~~~i~~~i~~~l~~lH~---~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~ 169 (296)
T cd06618 94 ELMS-TCLDKLLKRIQGPIPEDILGKMTVAIVKALHYLKE---KHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSK 169 (296)
T ss_pred eccC-cCHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHh---hCCEecCCCcHHHEEEcCCCCEEECccccchhccCCC
Confidence 9985 58888777655568999999999999999999993 2489999999999999999999999999997654322
Q ss_pred CcceeecccccccccCCCccCCCC----CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcch
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGI----VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~----~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
. .....++..|+|||.+.+.. ++.++||||||+++|||++|+.||.........+........+ .
T Consensus 170 ~---~~~~~~~~~y~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~~~~~-~------- 238 (296)
T cd06618 170 A---KTRSAGCAAYMAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNCKTEFEVLTKILQEEPP-S------- 238 (296)
T ss_pred c---ccCCCCCccccCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcchhHHHHHHHHhcCCCC-C-------
Confidence 2 12235778999999886543 8889999999999999999999986532211111111111000 0
Q ss_pred hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 733 NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.+....++.++.+++.+||+.||++||++.++++.
T Consensus 239 --------~~~~~~~~~~l~~li~~~l~~~p~~Rp~~~~il~~ 273 (296)
T cd06618 239 --------LPPNEGFSPDFCSFVDLCLTKDHRKRPKYRELLQH 273 (296)
T ss_pred --------CCCCCCCCHHHHHHHHHHccCChhhCCCHHHHhcC
Confidence 00111245678899999999999999999999765
No 334
>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5. Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the
Probab=100.00 E-value=6.6e-34 Score=304.73 Aligned_cols=267 Identities=23% Similarity=0.278 Sum_probs=199.2
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeecc----CCee
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSN----PDFK 572 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~----~~~~ 572 (791)
.++|++.+.||+|+||.||+|... +|+.||+|++.... ....+.+..|+.++++++||||+++++++.. ....
T Consensus 4 ~~~y~~~~~lg~g~~g~v~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~ 83 (334)
T cd07855 4 GSRYKPIENIGSGAYGVVCSAIDTRSGKKVAIKKIPHAFDVPTLAKRTLRELKILRHFKHDNIIAIRDILRPPGADFKDV 83 (334)
T ss_pred hhceeeeeeeecCCCeEEEEEEEcCCCCEEEEEEeccccccccchHHHHHHHHHHHhcCCCCccCHHHhccccCCCCceE
Confidence 378999999999999999999865 79999999986542 2334567789999999999999999998753 3567
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++||||+. |+|.+++..... +++..+..++.||+.||.||| ..+|+||||||+||++++++.+||+|||+++..
T Consensus 84 ~lv~e~~~-~~l~~~~~~~~~-~~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~ 157 (334)
T cd07855 84 YVVMDLME-SDLHHIIHSDQP-LTEEHIRYFLYQLLRGLKYIH----SANVIHRDLKPSNLLVNEDCELRIGDFGMARGL 157 (334)
T ss_pred EEEEehhh-hhHHHHhccCCC-CCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEecccccceee
Confidence 99999995 699999876544 899999999999999999999 678999999999999999999999999999765
Q ss_pred CCCCCc--ceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhh
Q 003855 653 GEGEDS--VTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEV 729 (791)
Q Consensus 653 ~~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (791)
...... .......++..|+|||.+.. ..++.++|||||||++|||++|+.||...... .....+.........+.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~y~~PE~~~~~~~~~~~~Di~slG~~l~el~~g~~pf~~~~~~--~~~~~~~~~~g~~~~~~ 235 (334)
T cd07855 158 SSSPTEHKYFMTEYVATRWYRAPELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYV--HQLKLILSVLGSPSEEV 235 (334)
T ss_pred cccCcCCCcccccccccccccChHHhcCCcccccccchHHHHHHHHHHHcCCCccCCCChH--HHHHHHHHHhCCChhHh
Confidence 433221 11123468889999998755 56889999999999999999999999753221 11111111111100000
Q ss_pred c----chhhhhh----H----Hh-hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 730 V----DANLVRE----E----QA-FSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 730 ~----d~~~~~~----~----~~-~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
. +...... . .. .......+.++.+++.+|++.+|++||++.++++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~~l~ 293 (334)
T cd07855 236 LNRIGSDRVRKYIQNLPRKQPVPWSKIFPKASPEALDLLSQMLQFDPEERITVEQALQ 293 (334)
T ss_pred hhhhchhhHHHHHhhcccCCCCCHHHHcccCCHHHHHHHHHHccCChhhCcCHHHHHh
Confidence 0 0000000 0 00 0001234677899999999999999999999886
No 335
>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They
Probab=100.00 E-value=1.3e-33 Score=295.46 Aligned_cols=263 Identities=24% Similarity=0.295 Sum_probs=201.3
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh--HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
|+..+.||+|++|.||+|... +++.+|+|.+..... .....+..|+.++++++||||+++++++.+++..++|+||+
T Consensus 1 y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (283)
T cd05118 1 YQKLGKIGEGTYGVVYKARDKLTGEIVAIKKIKLRFESEGIPKTALREIKLLKELNHPNIIKLLDVFRHKGDLYLVFEFM 80 (283)
T ss_pred CccceeeecCCCceEEEEEcCCCCcEEEEEEeccccccchhHHHHHHHHHHHHHhcCCCcchHHHhhccCCCEEEEEecc
Confidence 567789999999999999875 788999998865432 24567888999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
++ ++.+++......+++..+..++.|++.|+.||| ..+|+|+||+|+||++++++.++|+|||.+....... .
T Consensus 81 ~~-~l~~~l~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~--~ 153 (283)
T cd05118 81 DT-DLYKLIKDRQRGLPESLIKSYLYQLLQGLAFCH----SHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPV--R 153 (283)
T ss_pred CC-CHHHHHHhhcccCCHHHHHHHHHHHHHHHHHHH----HCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCc--c
Confidence 75 999998876566899999999999999999999 6789999999999999999999999999998775443 1
Q ss_pred eeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC----hhhhcc---
Q 003855 660 TQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG----LTEVVD--- 731 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~~d--- 731 (791)
......++..|+|||.+.+. .++.++||||+|+++|+|+||+.||...... ..+.... ...... .....+
T Consensus 154 ~~~~~~~~~~~~~PE~~~~~~~~~~~~Di~slG~~l~~l~tg~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~ 231 (283)
T cd05118 154 PYTHYVVTRWYRAPELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEI-DQLFKIF-RTLGTPDPEVWPKFTSLAR 231 (283)
T ss_pred cccCccCcccccCcHHHhcCCCCCchhHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH-HHcCCCchHhcccchhhhh
Confidence 12224578889999988766 7899999999999999999999998653221 1111111 111000 000000
Q ss_pred ---hhhhhh--HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 ---ANLVRE--EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 ---~~~~~~--~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+... .........++.++.+++.+||+.||.+||++.+++.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~ll~ 279 (283)
T cd05118 232 NYKFSFPKKAGMPLPKLFPNASPQALDLLSQMLHYDPHKRITAEQALA 279 (283)
T ss_pred hhhhhhccccccCHHHhhhhhCHHHHHHHHHHhccCcccCcCHHHHhh
Confidence 000000 0000112245678999999999999999999999975
No 336
>PHA02882 putative serine/threonine kinase; Provisional
Probab=100.00 E-value=5.5e-34 Score=299.39 Aligned_cols=259 Identities=20% Similarity=0.210 Sum_probs=185.8
Q ss_pred hhccccccccCCCcceEEEEEEecC----CcEEEEEEeehhhhHH-----------HHHHHHHHHHHHhccCCccceeee
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISD----GTDVAIKIFNLQLERA-----------FRSFDSECEVLRNVRHRNLIKILS 564 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~----~~~vavK~~~~~~~~~-----------~~~~~~e~~~l~~l~h~niv~l~~ 564 (791)
.++|++.+.||+|+||.||+|...+ +..+|+|+........ ......+...+..+.|++++++++
T Consensus 11 ~~~y~i~~~LG~G~fG~Vy~~~~~~~~~~~~~~~~k~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~ 90 (294)
T PHA02882 11 GKEWKIDKLIGCGGFGCVYETQCASDHCINNQAVAKIENLENETIVMETLVYNNIYDIDKIALWKNIHNIDHLGIPKYYG 90 (294)
T ss_pred CCceEEeeEEecCCCceEEEEEEcCCcccccceEEEeccccCCchhhHHHHHHhhhhHHHHHHHHHhccCCCCCCCcEEE
Confidence 3679999999999999999999753 4566777543221110 011223334455678999999998
Q ss_pred eeccCC----eeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCc
Q 003855 565 SCSNPD----FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMA 640 (791)
Q Consensus 565 ~~~~~~----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~ 640 (791)
++.... ..++++|++. .++.+.+.... ..++..+..++.|++.||+||| +.+|+||||||+||+++.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~i~~qi~~~l~~lH----~~~iiHrDiKp~Nill~~~~~ 164 (294)
T PHA02882 91 CGSFKRCRMYYRFILLEKLV-ENTKEIFKRIK-CKNKKLIKNIMKDMLTTLEYIH----EHGISHGDIKPENIMVDGNNR 164 (294)
T ss_pred eeeEecCCceEEEEEEehhc-cCHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCc
Confidence 765433 3467888774 46776665432 3578888999999999999999 678999999999999999999
Q ss_pred EEEeeeccccccCCCCCc-----ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHH
Q 003855 641 AHVSDFGISKLLGEGEDS-----VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 715 (791)
Q Consensus 641 ~kl~Dfgla~~~~~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~ 715 (791)
++|+|||+|+.+...... .......||+.|+|||+..+..++.++|||||||++|||++|+.||...........
T Consensus 165 ~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y~ape~~~~~~~~~~~DiwSlG~~l~el~~g~~P~~~~~~~~~~~~ 244 (294)
T PHA02882 165 GYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYYAGLDAHNGACVTRRGDLESLGYCMLKWAGIKLPWKGFGHNGNLIH 244 (294)
T ss_pred EEEEEcCCceeeccCCcccccccccccccCCCccccCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCccccchHHHH
Confidence 999999999876432211 111234689999999999999999999999999999999999999976422211111
Q ss_pred HHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 716 RWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
. ... +.+. .+.... .....+++.+.+++..|++.+|++||++.++++.+
T Consensus 245 ~-~~~-------~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~rp~~~~l~~~~ 293 (294)
T PHA02882 245 A-AKC-------DFIK-RLHEGK---IKIKNANKFIYDFIECVTKLSYEEKPDYDALIKIF 293 (294)
T ss_pred H-hHH-------HHHH-Hhhhhh---hccCCCCHHHHHHHHHHHhCCCCCCCCHHHHHHhh
Confidence 0 000 0000 000000 01124567789999999999999999999999876
No 337
>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re
Probab=100.00 E-value=3.7e-34 Score=296.42 Aligned_cols=245 Identities=25% Similarity=0.324 Sum_probs=195.3
Q ss_pred cCCCcceEEEEEEec-CCcEEEEEEeehhhh---HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCH
Q 003855 509 LGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE---RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSL 584 (791)
Q Consensus 509 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~---~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 584 (791)
||+|+||.||+++.. +|+.||+|++..... ...+.+.+|++++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~g~~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (265)
T cd05579 1 ISKGAYGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSFQGKKNLYLVMEYLPGGDL 80 (265)
T ss_pred CCCCCceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHheecCcEEEEEEecCCCCcH
Confidence 689999999999976 589999999865432 4556788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC------c
Q 003855 585 EKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED------S 658 (791)
Q Consensus 585 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~------~ 658 (791)
.+++.... .+++..+..++.|+++||+||| ..+++||||+|+||++++++.++|+|||++........ .
T Consensus 81 ~~~l~~~~-~~~~~~~~~i~~qi~~~L~~lH----~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~ 155 (265)
T cd05579 81 ASLLENVG-SLDEDVARIYIAEIVLALEYLH----SNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDE 155 (265)
T ss_pred HHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCccccccccc
Confidence 99998755 5899999999999999999999 67899999999999999999999999999876533211 1
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
.......++..|+|||......++.++||||||+++||+++|+.||...... ...........
T Consensus 156 ~~~~~~~~~~~~~~Pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~-----~~~~~~~~~~~------------ 218 (265)
T cd05579 156 KEDKRIVGTPDYIAPEVILGQGHSKTVDWWSLGCILYEFLVGIPPFHGETPE-----EIFQNILNGKI------------ 218 (265)
T ss_pred ccccCcccCccccCHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHH-----HHHHHHhcCCc------------
Confidence 1223345788999999988888999999999999999999999998653211 11111100000
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
..+.....+..+.+++.+|++.+|++|||+.++.+.|
T Consensus 219 -~~~~~~~~~~~~~~~i~~~l~~~p~~Rpt~~~~~~~l 255 (265)
T cd05579 219 -EWPEDVEVSDEAIDLISKLLVPDPEKRLGAKSIEEIK 255 (265)
T ss_pred -CCCccccCCHHHHHHHHHHhcCCHhhcCCCccHHHHh
Confidence 0001111256778999999999999999996555544
No 338
>KOG0690 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4.9e-35 Score=281.67 Aligned_cols=242 Identities=26% Similarity=0.290 Sum_probs=197.9
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
.+++|+..+++|+|.||.|-.++-+ +++.+|+|++++.. ++....-..|-++++..+||.+..+-..|+..+..|+
T Consensus 166 Tm~dFdfLKvLGkGTFGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKYsFQt~drlCF 245 (516)
T KOG0690|consen 166 TMEDFDFLKVLGKGTFGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKYSFQTQDRLCF 245 (516)
T ss_pred ccchhhHHHHhcCCccceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhhhhccCceEEE
Confidence 4678999999999999999999865 79999999998775 4455667789999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||+.||.|.-++..... +++....-+-..|..||.||| +.+||+||+|.+|.++|.+|++||+|||+++.--.
T Consensus 246 VMeyanGGeLf~HLsrer~-FsE~RtRFYGaEIvsAL~YLH----s~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~ 320 (516)
T KOG0690|consen 246 VMEYANGGELFFHLSRERV-FSEDRTRFYGAEIVSALGYLH----SRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIK 320 (516)
T ss_pred EEEEccCceEeeehhhhhc-ccchhhhhhhHHHHHHhhhhh----hCCeeeeechhhhheeccCCceEeeecccchhccc
Confidence 9999999999988876544 677777778889999999999 78899999999999999999999999999975221
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
........+||+.|+|||++.+..|...+|+|.+|||+|||++|+.||...... .+...+.
T Consensus 321 --~g~t~kTFCGTPEYLAPEVleDnDYgraVDWWG~GVVMYEMmCGRLPFyn~dh~--kLFeLIl--------------- 381 (516)
T KOG0690|consen 321 --YGDTTKTFCGTPEYLAPEVLEDNDYGRAVDWWGVGVVMYEMMCGRLPFYNKDHE--KLFELIL--------------- 381 (516)
T ss_pred --ccceeccccCChhhcCchhhccccccceeehhhhhHHHHHHHhccCcccccchh--HHHHHHH---------------
Confidence 222345578999999999999999999999999999999999999998652111 1111111
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCC
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRI 767 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP 767 (791)
.+...++ ...+++...++...+..||.+|.
T Consensus 382 -~ed~kFP--r~ls~eAktLLsGLL~kdP~kRL 411 (516)
T KOG0690|consen 382 -MEDLKFP--RTLSPEAKTLLSGLLKKDPKKRL 411 (516)
T ss_pred -hhhccCC--ccCCHHHHHHHHHHhhcChHhhc
Confidence 1111111 13445677899999999999997
No 339
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=1.2e-37 Score=308.10 Aligned_cols=374 Identities=29% Similarity=0.428 Sum_probs=313.7
Q ss_pred cCCccccCCCCCCeeecCCCcccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCc
Q 003855 4 QIPTEIGNLQNLQYLVFAENNLSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSIT 83 (791)
Q Consensus 4 ~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 83 (791)
++|+.++.+.+|..|++++|.+. ..|+.++.+..|..|+..+|+++ ++|++++. +.+|..|++.+|+++...|..+
T Consensus 105 ~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~~N~i~-slp~~~~~-~~~l~~l~~~~n~l~~l~~~~i- 180 (565)
T KOG0472|consen 105 ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDATNNQIS-SLPEDMVN-LSKLSKLDLEGNKLKALPENHI- 180 (565)
T ss_pred hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhccccccc-cCchHHHH-HHHHHHhhccccchhhCCHHHH-
Confidence 68999999999999999999998 66888999999999999999998 99998887 5689999999999995544444
Q ss_pred CCCCCCEEeccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChhhh
Q 003855 84 NATKLVALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPVIG 163 (791)
Q Consensus 84 ~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~ 163 (791)
+++.|++||...|.++ ..|..++++.+|.-|++..|+|..+| +|.++..|++|+++.|+|. .+|...+
T Consensus 181 ~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nki~~lP----------ef~gcs~L~Elh~g~N~i~-~lpae~~ 248 (565)
T KOG0472|consen 181 AMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNKIRFLP----------EFPGCSLLKELHVGENQIE-MLPAEHL 248 (565)
T ss_pred HHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcccccCC----------CCCccHHHHHHHhcccHHH-hhHHHHh
Confidence 4999999999999988 45667899999999999999998654 4888888888999888887 6677777
Q ss_pred hhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcc--------------
Q 003855 164 NFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEG-------------- 229 (791)
Q Consensus 164 ~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~-------------- 229 (791)
.-..++..|+|++|++. ..|+.++-+.+|++||+++|.|+ ..|..++++ +|+.|-+.+|.+++
T Consensus 249 ~~L~~l~vLDLRdNklk-e~Pde~clLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vL 325 (565)
T KOG0472|consen 249 KHLNSLLVLDLRDNKLK-EVPDEICLLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVL 325 (565)
T ss_pred cccccceeeeccccccc-cCchHHHHhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHH
Confidence 66677888888888888 67888888888888999988888 556788888 88888888888754
Q ss_pred --------------------------------------------------cCCccccccC---CCceEEecCCccCCCCC
Q 003855 230 --------------------------------------------------SIPYDLCHLK---LMFGIRLTGNKLSGHIP 256 (791)
Q Consensus 230 --------------------------------------------------~~~~~~~~l~---~L~~L~L~~N~i~~~~~ 256 (791)
.+|......- -....+++.|++. .+|
T Consensus 326 KyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elP 404 (565)
T KOG0472|consen 326 KYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELP 404 (565)
T ss_pred HHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhh
Confidence 1111111111 2567889999999 788
Q ss_pred ccccCCCCCcE-EEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccc
Q 003855 257 PCLVSLTSLRE-LHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALK 335 (791)
Q Consensus 257 ~~~~~l~~L~~-L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 335 (791)
..+..+..+.+ +.+++|.+ +.+|..++.+++|..|+|++|.+. .+|..++.+..|+.|++|+|++. ..|..+..+.
T Consensus 405 k~L~~lkelvT~l~lsnn~i-sfv~~~l~~l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq 481 (565)
T KOG0472|consen 405 KRLVELKELVTDLVLSNNKI-SFVPLELSQLQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQ 481 (565)
T ss_pred hhhHHHHHHHHHHHhhcCcc-ccchHHHHhhhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHH
Confidence 87877777654 55555655 488999999999999999999997 68899999999999999999998 8999999999
Q ss_pred cccccccccccCCCCCCcccCCCCCCcEEEccCCccCCCCchhhhhcccCceEEccCCCCcccCCCC
Q 003855 336 DLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQLKQFNVSHNRLEGEIPVK 402 (791)
Q Consensus 336 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~ 402 (791)
.|+.+-.++|+++...|..+.+|.+|..|||.+|.+. .+|..+++|.+|++|++++|++. .++..
T Consensus 482 ~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpfr-~Pr~~ 546 (565)
T KOG0472|consen 482 TLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPFR-QPRHQ 546 (565)
T ss_pred HHHHHHhccccccccChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCccC-CCHHH
Confidence 9999999999999666666999999999999999998 88999999999999999999999 44443
No 340
>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase. Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi
Probab=100.00 E-value=8.4e-34 Score=293.28 Aligned_cols=242 Identities=26% Similarity=0.312 Sum_probs=194.5
Q ss_pred cCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCH
Q 003855 509 LGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSL 584 (791)
Q Consensus 509 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 584 (791)
||.|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++++++.++...++|+||+++++|
T Consensus 1 lg~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (262)
T cd05572 1 LGVGGFGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTFKDKKYIYMLMEYCLGGEL 80 (262)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeEEcCCccEEEEecCCCCcH
Confidence 699999999999975 58999999987543 23456788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecc
Q 003855 585 EKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMT 664 (791)
Q Consensus 585 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 664 (791)
.+++.... .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++|+|||+++...... .....
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~~i~~~l~~lH----~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~---~~~~~ 152 (262)
T cd05572 81 WTILRDRG-LFDEYTARFYIACVVLAFEYLH----NRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQ---KTWTF 152 (262)
T ss_pred HHHHhhcC-CCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCccc---ccccc
Confidence 99998654 3789999999999999999999 6789999999999999999999999999998765432 12234
Q ss_pred cccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHH
Q 003855 665 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAK 744 (791)
Q Consensus 665 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 744 (791)
.++..|+|||...+..++.++|+||+|+++|||++|..||....... .+......... .....+
T Consensus 153 ~~~~~~~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~---~~~~~~~~~~~-------------~~~~~~ 216 (262)
T cd05572 153 CGTPEYVAPEIILNKGYDFSVDYWSLGILLYELLTGRPPFGEDDEDP---MEIYNDILKGN-------------GKLEFP 216 (262)
T ss_pred cCCcCccChhHhcCCCCCChhhhhhhHHHHHHHHhCCCCcCCCCCCH---HHHHHHHhccC-------------CCCCCC
Confidence 57889999999888889999999999999999999999997643211 11111111000 000011
Q ss_pred HHHHHHHHHHHhhccccCCCCCCC-----HHHHHH
Q 003855 745 MDCILSIMDLALDCCIESPDMRIN-----VTDAAA 774 (791)
Q Consensus 745 ~~~~~~l~~li~~cl~~~P~~RPt-----~~ev~~ 774 (791)
..++..+.+++.+||+.+|++||+ ++|+++
T Consensus 217 ~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~~l~~ 251 (262)
T cd05572 217 NYIDKAAKDLIKQLLRRNPEERLGNLKGGIKDIKK 251 (262)
T ss_pred cccCHHHHHHHHHHccCChhhCcCCcccCHHHHhc
Confidence 122467889999999999999999 666654
No 341
>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4. Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo
Probab=100.00 E-value=6.1e-34 Score=298.59 Aligned_cols=244 Identities=23% Similarity=0.320 Sum_probs=196.7
Q ss_pred ccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCH
Q 003855 506 CNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSL 584 (791)
Q Consensus 506 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 584 (791)
...||+|+||.||+|..+ +++.||||.+..........+..|+.+++.++||||+++++++...+..++||||+++++|
T Consensus 25 ~~~lg~g~~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~~~~~~L 104 (292)
T cd06657 25 FIKIGEGSTGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGAL 104 (292)
T ss_pred HHHcCCCCCeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEEEeCCEEEEEEecCCCCcH
Confidence 357999999999999874 7899999988655445556788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecc
Q 003855 585 EKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMT 664 (791)
Q Consensus 585 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 664 (791)
.+++... .+++..+..++.|++.|++||| +.+++||||+|+||++++++.++|+|||++........ .....
T Consensus 105 ~~~~~~~--~~~~~~~~~~~~ql~~~l~~lH----~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~--~~~~~ 176 (292)
T cd06657 105 TDIVTHT--RMNEEQIAAVCLAVLKALSVLH----AQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVP--RRKSL 176 (292)
T ss_pred HHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEECCCCCEEEcccccceecccccc--ccccc
Confidence 9987644 3789999999999999999999 67899999999999999999999999999876543221 12234
Q ss_pred cccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHH
Q 003855 665 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAK 744 (791)
Q Consensus 665 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 744 (791)
.++..|+|||...+..++.++||||+|+++|||++|..||..... ......+....+.... ..
T Consensus 177 ~~~~~y~~pE~~~~~~~~~~~Dv~slGvil~el~tg~~p~~~~~~--~~~~~~~~~~~~~~~~---------------~~ 239 (292)
T cd06657 177 VGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPP--LKAMKMIRDNLPPKLK---------------NL 239 (292)
T ss_pred ccCccccCHHHhcCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCH--HHHHHHHHhhCCcccC---------------Cc
Confidence 578899999998888899999999999999999999999864211 1111111111111100 01
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 745 MDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 745 ~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..++..+.+++.+||+.+|.+||++.++++
T Consensus 240 ~~~~~~l~~li~~~l~~~P~~R~~~~~ll~ 269 (292)
T cd06657 240 HKVSPSLKGFLDRLLVRDPAQRATAAELLK 269 (292)
T ss_pred ccCCHHHHHHHHHHHhCCcccCcCHHHHhc
Confidence 123456779999999999999999999987
No 342
>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85. Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.
Probab=100.00 E-value=1.4e-33 Score=295.31 Aligned_cols=264 Identities=22% Similarity=0.316 Sum_probs=199.1
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh-HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE-RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
+|+..+.||+|++|.||+|+.. +|+.||||++..... ...+.+.+|+.++++++||||+++++++.+.+..++||||+
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (284)
T cd07836 1 NFKQLEKLGEGTYATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVIHTENKLMLVFEYM 80 (284)
T ss_pred CceEeeeeccCCceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeEeeCCcEEEEEecC
Confidence 4788999999999999999975 689999999875532 23456778999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 580 PNGSLEKWLYSHN--YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 580 ~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
++ +|.+++.... ..+++..+..++.|++.||.||| +.+++||||+|+||++++++.++++|||+++.......
T Consensus 81 ~~-~l~~~~~~~~~~~~~~~~~~~~~~~qi~~~l~~lH----~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~ 155 (284)
T cd07836 81 DK-DLKKYMDTHGVRGALDPNTVKSFTYQLLKGIAFCH----ENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVN 155 (284)
T ss_pred Cc-cHHHHHHhcCCCCCcCHHHHHHHHHHHHHHHHHHH----HCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCcc
Confidence 75 8999887543 45899999999999999999999 67899999999999999999999999999976533211
Q ss_pred cceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC---Chhhhcc--
Q 003855 658 SVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH---GLTEVVD-- 731 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~d-- 731 (791)
......++..|+|||+..+ ..++.++|||||||++|||++|+.||.+.... ....+........ ....+.+
T Consensus 156 --~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 232 (284)
T cd07836 156 --TFSNEVVTLWYRAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNE-DQLLKIFRIMGTPTESTWPGISQLP 232 (284)
T ss_pred --ccccccccccccChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcH-HHHHHHHHHhCCCChhhHHHHhcCc
Confidence 1223456889999998755 45788999999999999999999998753221 1111111110000 0000000
Q ss_pred ---h---hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 ---A---NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 ---~---~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
. ...... .......++..+.+++.+|++.||++||++.|+++
T Consensus 233 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 280 (284)
T cd07836 233 EYKPTFPRYPPQD-LQQLFPHADPLGIDLLHRLLQLNPELRISAHDALQ 280 (284)
T ss_pred hhcccccCCChHH-HHHHhhhcCcHHHHHHHHHhcCCcccCCCHHHHhc
Confidence 0 000000 00011234577889999999999999999999875
No 343
>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po
Probab=100.00 E-value=1.8e-33 Score=295.09 Aligned_cols=265 Identities=22% Similarity=0.270 Sum_probs=199.4
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccC--CeeeEEEe
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP--DFKALVLE 577 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~~lv~e 577 (791)
|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|++++++++|||++++++++.+. +..++|+|
T Consensus 1 y~~~~~l~~g~~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~lv~e 80 (287)
T cd07840 1 YEKIAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTSKGKGSIYMVFE 80 (287)
T ss_pred CeeeEEeccCCCeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEecCCCCcEEEEec
Confidence 567889999999999999976 58899999997653 33446788899999999999999999999887 88999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|+++ +|.+++......+++..+..++.|+++|++||| ..+++|+||+|+||++++++.+||+|||++........
T Consensus 81 ~~~~-~l~~~~~~~~~~~~~~~~~~i~~~i~~al~~LH----~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~ 155 (287)
T cd07840 81 YMDH-DLTGLLDSPEVKFTESQIKCYMKQLLEGLQYLH----SNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNS 155 (287)
T ss_pred cccc-cHHHHHhccCCCCCHHHHHHHHHHHHHHHHHHH----HCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCc
Confidence 9974 999998866556899999999999999999999 67899999999999999999999999999987654331
Q ss_pred cceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC---Chhhhcc--
Q 003855 658 SVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH---GLTEVVD-- 731 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~---~~~~~~d-- 731 (791)
.......++..|+|||...+ ..++.++||||||+++|||++|+.||..... ...+.......... ......+
T Consensus 156 -~~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (287)
T cd07840 156 -ADYTNRVITLWYRPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTE-LEQLEKIFELCGSPTDENWPGVSKLP 233 (287)
T ss_pred -ccccccccccccCCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCCh-HHHHHHHHHHhCCCchhhccccccch
Confidence 11223456788999997654 4678999999999999999999999875321 11111111110000 0000000
Q ss_pred ------hhhhhhHHhhHHHHH-HHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 ------ANLVREEQAFSAKMD-CILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 ------~~~~~~~~~~~~~~~-~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.............. ++..+.+++.+|++.+|++||++.++++
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 283 (287)
T cd07840 234 WFENLKPKKPYKRRLREFFKHLIDPSALDLLDKLLTLDPKKRISADQALQ 283 (287)
T ss_pred hhhhccccccchhHHHHHhcccCCHHHHHHHHHHcCCChhhCcCHHHHhh
Confidence 000000000000111 3677899999999999999999999976
No 344
>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein. Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc
Probab=100.00 E-value=1.6e-33 Score=299.49 Aligned_cols=264 Identities=21% Similarity=0.218 Sum_probs=194.9
Q ss_pred cccccCCCcceEEEEEEecCCcEEEEEEeehh--hhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCC
Q 003855 505 ECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNG 582 (791)
Q Consensus 505 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 582 (791)
+.+.+|.|+++.||++.. +++.||||++... .....+.+..|+.++++++||||+++++++.+.+..+++|||+++|
T Consensus 6 i~~~~~~~~~v~~~~~~~-~~~~~avK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~e~~~~~ 84 (314)
T cd08216 6 IGKCFEDLMIVHLAKHKP-TNTLVAVKKINLDSCSKEDLKLLQQEIITSRQLQHPNILPYVTSFIVDSELYVVSPLMAYG 84 (314)
T ss_pred hhHhhcCCceEEEEEecC-CCCEEEEEEEeccccchhHHHHHHHHHHHHHhcCCcchhhhhheeecCCeEEEEEeccCCC
Confidence 344555566666666655 7899999998754 3445678999999999999999999999999999999999999999
Q ss_pred CHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc---
Q 003855 583 SLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS--- 658 (791)
Q Consensus 583 ~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~--- 658 (791)
++.+++... ...+++..+..++.|+++||+||| +.+|+||||||+||+++.++.+|++|||.+..+......
T Consensus 85 ~l~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~LH----~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~ 160 (314)
T cd08216 85 SCEDLLKTHFPEGLPELAIAFILKDVLNALDYIH----SKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRV 160 (314)
T ss_pred CHHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCcceEEEecCCceEEecCccceeeccccccccc
Confidence 999999854 345889999999999999999999 678999999999999999999999999998755332211
Q ss_pred --ceeecccccccccCCCccCC--CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC---------
Q 003855 659 --VTQTMTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG--------- 725 (791)
Q Consensus 659 --~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--------- 725 (791)
.......++..|+|||++.. ..++.++|||||||++|||++|+.||............ +....+..
T Consensus 161 ~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~Diws~G~il~el~~g~~pf~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 239 (314)
T cd08216 161 VHDFPKSSVKNLPWLSPEVLQQNLQGYNEKSDIYSVGITACELANGHVPFKDMPATQMLLEK-VRGTVPCLLDKSTYPLY 239 (314)
T ss_pred cccccccccccccccCHHHhcCCCCCCCcchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH-HhccCccccccCchhhh
Confidence 11122346778999998765 35889999999999999999999999764322221111 11111100
Q ss_pred ---hh----hhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 726 ---LT----EVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 726 ---~~----~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
.. ...+.... .............++.+++.+||+.||++|||+.|+++.
T Consensus 240 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~ 295 (314)
T cd08216 240 EDSMSQSRSSNEHPNNR-DSVDHPYTRTFSEHFHQFVELCLQRDPESRPSASQLLNH 295 (314)
T ss_pred cCCcCcccccccccchh-hhhhcchhhHHHHHHHHHHHHHhhcCCCcCcCHHHHhcC
Confidence 00 00011100 011111222445678899999999999999999999863
No 345
>PHA03210 serine/threonine kinase US3; Provisional
Probab=100.00 E-value=6.7e-34 Score=318.78 Aligned_cols=270 Identities=17% Similarity=0.210 Sum_probs=189.9
Q ss_pred HhhccccccccCCCcceEEEEEEec--CCcEEEEEE--------------eeh---hhhHHHHHHHHHHHHHHhccCCcc
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS--DGTDVAIKI--------------FNL---QLERAFRSFDSECEVLRNVRHRNL 559 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~--------------~~~---~~~~~~~~~~~e~~~l~~l~h~ni 559 (791)
..++|++.+.||+|+||.||+|..+ ++..+++|. +.. ........+.+|+.++++++||||
T Consensus 146 ~~~~Y~ii~~LG~G~fG~Vyl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~Ei~il~~l~HpnI 225 (501)
T PHA03210 146 FLAHFRVIDDLPAGAFGKIFICALRASTEEAEARRGVNSTNQGKPKCERLIAKRVKAGSRAAIQLENEILALGRLNHENI 225 (501)
T ss_pred hhhccEEEeEecCCCCcceEEEEEeccchhhhhhhccccccccchhhhhhHhHHhhcchHHHHHHHHHHHHHHhCCCCCc
Confidence 4578999999999999999998753 222222221 111 112234568899999999999999
Q ss_pred ceeeeeeccCCeeeEEEecCCCCCHHHHHhhCC----CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEe
Q 003855 560 IKILSSCSNPDFKALVLEFMPNGSLEKWLYSHN----YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILL 635 (791)
Q Consensus 560 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~----~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill 635 (791)
+++++++...+..++|+|++ .+++.+++.... .......+..++.|++.||.||| +.+|+||||||+|||+
T Consensus 226 v~l~~~~~~~~~~~lv~e~~-~~~l~~~l~~~~~~~~~~~~~~~~~~i~~ql~~aL~yLH----~~gIiHrDLKP~NILl 300 (501)
T PHA03210 226 LKIEEILRSEANTYMITQKY-DFDLYSFMYDEAFDWKDRPLLKQTRAIMKQLLCAVEYIH----DKKLIHRDIKLENIFL 300 (501)
T ss_pred CcEeEEEEECCeeEEEEecc-ccCHHHHHhhccccccccccHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEE
Confidence 99999999999999999998 458888876432 12335567789999999999999 7789999999999999
Q ss_pred CCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCC-CCCccccC-cch
Q 003855 636 DENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR-PTDEMFTG-EMS 713 (791)
Q Consensus 636 ~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~-p~~~~~~~-~~~ 713 (791)
+.++.+||+|||+++.+...... ......||..|+|||++.+..++.++|||||||++|||++|.. |+...... ...
T Consensus 301 ~~~~~vkL~DFGla~~~~~~~~~-~~~~~~gt~~y~aPE~~~~~~~~~~~DiwSlGvil~ell~~~~~p~~~~~~~~~~~ 379 (501)
T PHA03210 301 NCDGKIVLGDFGTAMPFEKEREA-FDYGWVGTVATNSPEILAGDGYCEITDIWSCGLILLDMLSHDFCPIGDGGGKPGKQ 379 (501)
T ss_pred CCCCCEEEEeCCCceecCccccc-ccccccCCcCCCCchhhcCCCCCcHHHHHHHHHHHHHHHHCCCCCccCCCCCHHHH
Confidence 99999999999999876543221 2223568999999999999999999999999999999999875 44332111 112
Q ss_pred HHHHHHHh------cCCC---hhhhcchh-hhh---hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 714 LRRWVKES------LPHG---LTEVVDAN-LVR---EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 714 ~~~~~~~~------~~~~---~~~~~d~~-~~~---~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.+.+... .+.. ..+.++.. ... ...........+..+.+++.+|++.||++|||+.|+++
T Consensus 380 ~~~~~~~~~~~~~~~p~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~li~kmL~~DP~~Rpsa~elL~ 453 (501)
T PHA03210 380 LLKIIDSLSVCDEEFPDPPCKLFDYIDSAEIDHAGHSVPPLIRNLGLPADFEYPLVKMLTFDWHLRPGAAELLA 453 (501)
T ss_pred HHHHHHhcccChhhcCCcHHHHHHHhhhhhcccCccchhhHHHhcCCChHHHHHHHHHhccCcccCcCHHHHhh
Confidence 22222111 0110 00111000 000 00000011123456778899999999999999999986
No 346
>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul
Probab=100.00 E-value=1.1e-33 Score=303.46 Aligned_cols=272 Identities=24% Similarity=0.299 Sum_probs=200.7
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehh--hhHHHHHHHHHHHHHHhc-cCCccceeeeeecc--CCee
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ--LERAFRSFDSECEVLRNV-RHRNLIKILSSCSN--PDFK 572 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~--~~~~ 572 (791)
..++|++.+.||+|+||.||+|... +++.||+|++... .......+..|+.+++++ +||||+++++++.. ....
T Consensus 5 ~~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~vK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~~~~~~~~ 84 (337)
T cd07852 5 ILRKYEILQKLGKGAYGIVWKAIDRRTKEVVALKKIFDAFRNATDAQRTFREIMFLQELGDHPNIVKLLNVIKAENDKDI 84 (337)
T ss_pred hhhHHHHhHhhcCCCCeeEEEEEEcCCCeEEEEEeeccccCcchhhhhhhHHHHHHHHhcCCCCccceeeeeccCCCceE
Confidence 4578999999999999999999975 6889999987542 123345677899999999 99999999998854 3468
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++||||++ ++|.+++... .+++..+..++.|++.||+||| +.+|+||||||+||+++.++.+||+|||+++..
T Consensus 85 ~lv~e~~~-~~L~~~~~~~--~~~~~~~~~i~~qi~~~L~~LH----~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~ 157 (337)
T cd07852 85 YLVFEYME-TDLHAVIRAN--ILEDVHKRYIMYQLLKALKYIH----SGNVIHRDLKPSNILLNSDCRVKLADFGLARSL 157 (337)
T ss_pred EEEecccc-cCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHEEEcCCCcEEEeeccchhcc
Confidence 99999996 5999998765 5789999999999999999999 678999999999999999999999999999876
Q ss_pred CCCCCc---ceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChh-
Q 003855 653 GEGEDS---VTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLT- 727 (791)
Q Consensus 653 ~~~~~~---~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~- 727 (791)
...... .......|+..|+|||.+.+ ..++.++||||||+++|||++|+.||......+ ...+.... ......
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~~l~el~tg~~pf~~~~~~~-~~~~~~~~-~~~~~~~ 235 (337)
T cd07852 158 SELEENPENPVLTDYVATRWYRAPEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLN-QLEKIIEV-IGPPSAE 235 (337)
T ss_pred ccccccccCcchhcccccccccCceeeeccccccccchHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHHH-hCCCCHH
Confidence 443221 12223457889999997654 568889999999999999999999986532211 11111111 000000
Q ss_pred -----------hhcchhhhhhHHh-hHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHH
Q 003855 728 -----------EVVDANLVREEQA-FSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK--LKKI 779 (791)
Q Consensus 728 -----------~~~d~~~~~~~~~-~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~--L~~~ 779 (791)
+.++......... ......++.++.+++.+|++.+|++|||+.++++. +.++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~~P~~Rps~~~il~~~~~~~~ 301 (337)
T cd07852 236 DIESIKSPFAATMLDSLPSRPRKPLDELLPKASDDALDLLKKLLVFNPNKRLTAEEALEHPYVAQF 301 (337)
T ss_pred HHHHHHhhhHHHhhhhcccccccchhhhccCCCHHHHHHHHHhccCCcccccCHHHHhhChhhhhh
Confidence 0000000000000 00011246778999999999999999999999975 4444
No 347
>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They
Probab=100.00 E-value=2.3e-33 Score=289.20 Aligned_cols=248 Identities=25% Similarity=0.354 Sum_probs=203.9
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|+..+.||+|+||.||++... ++..||+|++.... ....+.+.+|++++++++|||++++.+.+...+..++|+||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~~~~~lv~e~ 80 (258)
T cd08215 1 KYEIIKQIGKGSFGKVYLVRRKSDGKLYVLKEIDLSNMSEKEREDALNEVKILKKLNHPNIIKYYESFEEKGKLCIVMEY 80 (258)
T ss_pred CceEEeeeccCCCeEEEEEEEcCCCcEEEEEEeecccCChHHHHHHHHHHHHHHhcCCCChhheEEEEecCCEEEEEEEe
Confidence 4788899999999999999975 68999999987553 24566788999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 579 MPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 579 ~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
+++++|.+++... ...+++..+..++.+++.|+.||| +.+++|+||+|+||++++++.++|+|||.+......
T Consensus 81 ~~~~~L~~~l~~~~~~~~~~~~~~~~~i~~~i~~~l~~lh----~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~ 156 (258)
T cd08215 81 ADGGDLSQKIKKQKKEGKPFPEEQILDWFVQLCLALKYLH----SRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSST 156 (258)
T ss_pred cCCCcHHHHHHHhhccCCCcCHHHHHHHHHHHHHHHHHHH----hCCEecccCChHHeEEcCCCcEEECCccceeecccC
Confidence 9999999999865 356899999999999999999999 678999999999999999999999999999876543
Q ss_pred CCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
. .......|++.|+|||...+..++.++||||+|+++|+|++|+.||..... .+............
T Consensus 157 ~--~~~~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~~~~~l~~g~~p~~~~~~-----~~~~~~~~~~~~~~------- 222 (258)
T cd08215 157 V--DLAKTVVGTPYYLSPELCQNKPYNYKSDIWSLGCVLYELCTLKHPFEGENL-----LELALKILKGQYPP------- 222 (258)
T ss_pred c--ceecceeeeecccChhHhccCCCCccccHHHHHHHHHHHHcCCCCCCCCcH-----HHHHHHHhcCCCCC-------
Confidence 2 122234678899999998888899999999999999999999999865321 11111111111000
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.+..++..+.+++.+||..+|++||++.|+++
T Consensus 223 -------~~~~~~~~~~~~i~~~l~~~p~~Rp~~~~ll~ 254 (258)
T cd08215 223 -------IPSQYSSELRNLVSSLLQKDPEERPSIAQILQ 254 (258)
T ss_pred -------CCCCCCHHHHHHHHHHcCCChhhCcCHHHHhc
Confidence 01134466889999999999999999999975
No 348
>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase. Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm
Probab=100.00 E-value=1.2e-33 Score=297.52 Aligned_cols=265 Identities=22% Similarity=0.263 Sum_probs=195.1
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh--HHHHHHHHHHHHHHhcc-CCccceeeeeeccCCe-----
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE--RAFRSFDSECEVLRNVR-HRNLIKILSSCSNPDF----- 571 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~----- 571 (791)
++|+..+.||+|+||.||+|... +++.||+|....... .....+.+|+.+++.+. ||||+++++++...+.
T Consensus 1 ~~y~~~~~lg~g~~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~~~~~~~~ 80 (295)
T cd07837 1 DAYEKLEKIGEGTYGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVEEKNGKPS 80 (295)
T ss_pred CCceEeeEecccCCeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeecCCCCCce
Confidence 46888999999999999999965 789999998765432 23456788999999995 6999999999876555
Q ss_pred eeEEEecCCCCCHHHHHhhC----CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC-CCcEEEeee
Q 003855 572 KALVLEFMPNGSLEKWLYSH----NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE-NMAAHVSDF 646 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~----~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~-~~~~kl~Df 646 (791)
.++||||+++ ++.+++... ...+++..+..++.||++||.||| +.+|+||||+|+||+++. ++.+||+||
T Consensus 81 ~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~qi~~~L~~LH----~~~i~H~dl~~~nil~~~~~~~~kl~df 155 (295)
T cd07837 81 LYLVFEYLDS-DLKKFMDSNGRGPGRPLPAKTIKSFMYQLLKGVAHCH----KHGVMHRDLKPQNLLVDKQKGLLKIADL 155 (295)
T ss_pred EEEEeeccCc-CHHHHHHHhcccCCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChHHEEEecCCCeEEEeec
Confidence 7999999975 899988743 234799999999999999999999 678999999999999998 899999999
Q ss_pred ccccccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc-CC
Q 003855 647 GISKLLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL-PH 724 (791)
Q Consensus 647 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~-~~ 724 (791)
|+++.+..... ......+++.|+|||++.+ ..++.++||||||+++|||++|..||......+ .+........ +.
T Consensus 156 g~~~~~~~~~~--~~~~~~~~~~~~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~-~~~~~~~~~~~~~ 232 (295)
T cd07837 156 GLGRAFSIPVK--SYTHEIVTLWYRAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQ-QLLHIFKLLGTPT 232 (295)
T ss_pred ccceecCCCcc--ccCCcccccCCCChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHH-HHHHHHHHhCCCC
Confidence 99986533211 1122356888999997754 557899999999999999999999986532211 1111111000 00
Q ss_pred C--hhhhcc-------hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 725 G--LTEVVD-------ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 725 ~--~~~~~d-------~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
. ...... +........ .....++.++.+++.+|++.||++||++.|++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~~l~~~P~~R~~~~eil~ 290 (295)
T cd07837 233 EQVWPGVSKLRDWHEFPQWKPQDLS-RAVPDLSPEGLDLLQKMLRYDPAKRISAKAALT 290 (295)
T ss_pred hhhCcchhhccchhhcCcccchhHH-HhccccCHHHHHHHHHHccCChhhcCCHHHHhc
Confidence 0 000000 000000000 011235677889999999999999999999875
No 349
>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains. Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an
Probab=100.00 E-value=2.5e-33 Score=288.71 Aligned_cols=246 Identities=29% Similarity=0.349 Sum_probs=201.5
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|++.+.||+|+||.||+++.. +++.+|+|.+.... ......+..|++++++++||||+++.+++.+....++||||
T Consensus 1 ~y~~~~~i~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (256)
T cd08530 1 DFKVLKKLGKGSYGSVYKVKRLSDNQFYALKEVDLGSMSQKEREDAVNEIRILASVNHPNIISYKEAFLDGNKLCIVMEY 80 (256)
T ss_pred CceEeeeecCCCceeEEEEEECCCCCEEEEEEEehhhccHHHHHHHHHHHHHHHhCCCCCchhhhhhhccCCEEEEEehh
Confidence 4778899999999999999864 78899999987543 33456778899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 579 MPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 579 ~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
+++++|.+++... ...+++..++.++.|++.|++||| +.+++||||+|+||++++++.+|++|||+++.....
T Consensus 81 ~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~l~~al~~lh----~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~ 156 (256)
T cd08530 81 APFGDLSKAISKRKKKRKLIPEQEIWRIFIQLLRGLQALH----EQKILHRDLKSANILLVANDLVKIGDLGISKVLKKN 156 (256)
T ss_pred cCCCCHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCcceEEEecCCcEEEeeccchhhhccC
Confidence 9999999998752 345899999999999999999999 778999999999999999999999999999876543
Q ss_pred CCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
. .....++..|+|||...+..++.++|+||+|+++|||++|+.||...... .+...+.. ....
T Consensus 157 ~----~~~~~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~~--~~~~~~~~---~~~~-------- 219 (256)
T cd08530 157 M----AKTQIGTPHYMAPEVWKGRPYSYKSDIWSLGCLLYEMATFAPPFEARSMQ--DLRYKVQR---GKYP-------- 219 (256)
T ss_pred C----cccccCCccccCHHHHCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHH--HHHHHHhc---CCCC--------
Confidence 1 12245788999999998888999999999999999999999999753211 11111110 0000
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.....++.++.+++.+|++.+|++||++.|+++
T Consensus 220 ------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~~l~ 252 (256)
T cd08530 220 ------PIPPIYSQDLQNFIRSMLQVKPKLRPNCDKILA 252 (256)
T ss_pred ------CCchhhCHHHHHHHHHHcCCCcccCCCHHHHhc
Confidence 011134566889999999999999999999975
No 350
>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of
Probab=100.00 E-value=1.9e-33 Score=293.06 Aligned_cols=243 Identities=23% Similarity=0.308 Sum_probs=191.7
Q ss_pred cCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCH
Q 003855 509 LGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSL 584 (791)
Q Consensus 509 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 584 (791)
||+|+||.||+|..+ +|+.||+|.+.... ....+.+..|++++++++||||+++++++...+..++||||+++++|
T Consensus 1 lg~g~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L 80 (277)
T cd05577 1 LGKGGFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAFETKDDLCLVMTLMNGGDL 80 (277)
T ss_pred CCCCCceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEEecCCeEEEEEecCCCCcH
Confidence 699999999999865 68999999986542 22344567899999999999999999999999999999999999999
Q ss_pred HHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeec
Q 003855 585 EKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTM 663 (791)
Q Consensus 585 ~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~ 663 (791)
.+++.... ..+++..+..++.|++.|+.||| ..+++||||+|+||++++++.++|+|||.+....... ....
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~~~ql~~~l~~lH----~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~---~~~~ 153 (277)
T cd05577 81 KYHIYNVGEPGFPEARAIFYAAQIICGLEHLH----QRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGK---KIKG 153 (277)
T ss_pred HHHHHHcCcCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCC---cccc
Confidence 99998654 35899999999999999999999 6789999999999999999999999999997654321 1223
Q ss_pred ccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHH
Q 003855 664 TMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSA 743 (791)
Q Consensus 664 ~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 743 (791)
..++..|+|||+..++.++.++||||+||++|+|++|+.||...... ............. ....
T Consensus 154 ~~~~~~y~~PE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~~~---------------~~~~ 217 (277)
T cd05577 154 RAGTPGYMAPEVLQGEVYDFSVDWFALGCTLYEMIAGRSPFRQRKEK-VEKEELKRRTLEM---------------AVEY 217 (277)
T ss_pred ccCCCCcCCHHHhcCCCCCchhhhHHHHHHHHHHhhCCCCCCCCccc-ccHHHHHhccccc---------------cccC
Confidence 45788999999988888999999999999999999999998653221 1111111100000 0001
Q ss_pred HHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003855 744 KMDCILSIMDLALDCCIESPDMRI-----NVTDAAA 774 (791)
Q Consensus 744 ~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~ 774 (791)
+..++..+.+++.+||+.+|++|| ++.++++
T Consensus 218 ~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 253 (277)
T cd05577 218 PDKFSPEAKDLCEALLQKDPEKRLGCRGGSADEVRE 253 (277)
T ss_pred CccCCHHHHHHHHHHccCChhHccCCCcccHHHHHh
Confidence 112356678999999999999999 5555653
No 351
>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast
Probab=100.00 E-value=1.4e-33 Score=290.24 Aligned_cols=247 Identities=26% Similarity=0.390 Sum_probs=202.1
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh--HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+|+..+.||+|++|.||+|+.. +++.||+|.+..... ...+.+.+|++++++++|||++++++++.+....++||||
T Consensus 1 ~y~~~~~l~~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~v~e~ 80 (254)
T cd06627 1 NYQLGDLIGRGAFGVVYKGLNLETGDFVAIKQISLEKIKEEALKSIMQEIDLLKNLKHPNIVKYIGSIETSDSLYIILEY 80 (254)
T ss_pred CceeeeEEcccCCeEEEEEEEcCCCcEEEEEEecccccCHHHHHHHHHHHHHHHhCCCCCccEEEEEEEeCCEEEEEEec
Confidence 4778899999999999999865 678999999876543 4567899999999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+++++|.+++... ..+++..+..++.|++.|+.||| +.+++||||+|+||+++.++.++|+|||.+.........
T Consensus 81 ~~~~~L~~~~~~~-~~l~~~~~~~~~~~i~~~l~~lH----~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~ 155 (254)
T cd06627 81 AENGSLRQIIKKF-GPFPESLVAVYVYQVLQGLAYLH----EQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKD 155 (254)
T ss_pred CCCCcHHHHHHhc-cCCCHHHHHHHHHHHHHHHHHHh----hCCcccCCCCHHHEEECCCCCEEEeccccceecCCCccc
Confidence 9999999999865 34899999999999999999999 678999999999999999999999999999876543321
Q ss_pred ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhH
Q 003855 659 VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREE 738 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~ 738 (791)
.....++..|+|||...+..++.++||||+|+++|+|++|+.||..... ........ .....
T Consensus 156 --~~~~~~~~~y~~pe~~~~~~~~~~~Dv~~lG~~l~~l~~g~~p~~~~~~----~~~~~~~~-~~~~~----------- 217 (254)
T cd06627 156 --DASVVGTPYWMAPEVIEMSGASTASDIWSLGCTVIELLTGNPPYYDLNP----MAALFRIV-QDDHP----------- 217 (254)
T ss_pred --ccccccchhhcCHhhhcCCCCCcchhHHHHHHHHHHHHhCCCCCCCccH----HHHHHHHh-ccCCC-----------
Confidence 2234578899999998887889999999999999999999999865321 11111110 00000
Q ss_pred HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 739 QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 739 ~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+..++..+.+++.+|+..+|++||++.|++.
T Consensus 218 ---~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~l~ 250 (254)
T cd06627 218 ---PLPEGISPELKDFLMQCFQKDPNLRPTAKQLLK 250 (254)
T ss_pred ---CCCCCCCHHHHHHHHHHHhCChhhCcCHHHHhc
Confidence 001123456789999999999999999999874
No 352
>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta. Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig
Probab=100.00 E-value=1.8e-33 Score=300.60 Aligned_cols=263 Identities=20% Similarity=0.280 Sum_probs=193.4
Q ss_pred cccCCC--cceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTG--SFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G--~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
..||+| +||+||+|+.. +|+.||+|++.... .+..+.+.+|+.+++.++||||+++++++..++..++|+||+.+
T Consensus 4 ~~ig~g~~~~~~v~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~h~niv~~~~~~~~~~~~~~v~e~~~~ 83 (328)
T cd08226 4 VEIGRGFCNLTSVYLARHTPTGTLVTVRITDLENCTEEHLKALQNEVVLSHFFRHPNIMTSWTVFTTGSWLWVISPFMAY 83 (328)
T ss_pred HHhCCcccCceeEEEEEEcCCCcEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCcceEeeeEecCCceEEEEecccC
Confidence 457777 89999999874 79999999986432 33457788999999999999999999999999999999999999
Q ss_pred CCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc-
Q 003855 582 GSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV- 659 (791)
Q Consensus 582 g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~- 659 (791)
|++.+++... ...+++..+..++.|++.||+||| +.+++||||||+||+++.++.++++||+.+..........
T Consensus 84 ~~l~~~l~~~~~~~~~~~~~~~~~~qi~~aL~~lH----~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (328)
T cd08226 84 GSANSLLKTYFPEGMSEALIGNILFGALRGLNYLH----QNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAK 159 (328)
T ss_pred CCHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCcccc
Confidence 9999999854 234889999999999999999999 6789999999999999999999999998664332211110
Q ss_pred ----eeecccccccccCCCccCC--CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc---------CC
Q 003855 660 ----TQTMTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL---------PH 724 (791)
Q Consensus 660 ----~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~---------~~ 724 (791)
......++..|+|||++.+ ..++.++|||||||++|||++|+.||......+. ......... +.
T Consensus 160 ~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~~DiwslG~~l~el~~g~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 238 (328)
T cd08226 160 VVYDFPQFSTSVLPWLSPELLRQDLYGYNVKSDIYSVGITACELATGRVPFQDMLRTQM-LLQKLKGPPYSPLDITTFPC 238 (328)
T ss_pred ccccccccccCccCccChhhhcCCCCCCCchhhHHHHHHHHHHHHhCCCCCCCcChHHH-HHHHhcCCCCCCccccccch
Confidence 0111234567999999865 3478999999999999999999999976432211 111111000 00
Q ss_pred Chhhhcc-----------h--------hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 725 GLTEVVD-----------A--------NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 725 ~~~~~~d-----------~--------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
......+ . .........+....++..+.+++.+||+.||++|||+.|+++
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~Rpta~e~l~ 307 (328)
T cd08226 239 EESRMKNSQSGVDSGIGESVVAAGMTQTMTSERLRTPSSKTFSPAFQNLVELCLQQDPEKRPSASSLLS 307 (328)
T ss_pred hhhhhccchhhhhcccccchhccccccccccccccchhhhhhhHHHHHHHHHHccCCcccCCCHHHHhh
Confidence 0000000 0 000000011223356778999999999999999999999974
No 353
>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2. Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin
Probab=100.00 E-value=2.8e-33 Score=296.27 Aligned_cols=247 Identities=27% Similarity=0.317 Sum_probs=196.5
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehh---hhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ---LERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
+.|...+.||+|+||.||+|+.. +++.||+|.+... .....+.+.+|+++++.++|||++++.+++......++||
T Consensus 15 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~ 94 (308)
T cd06634 15 KLFSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYLREHTAWLVM 94 (308)
T ss_pred HHHHHHHheeeCCCEEEEEEEEcCCCcEEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCcccEEEEEEcCCeeEEEE
Confidence 34777789999999999999965 6788999988642 2344567888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
||+. |++.+++......+++.++..++.|++.|+.||| +.+++||||+|+||+++.++.++++|||++......
T Consensus 95 e~~~-~~l~~~~~~~~~~l~~~~~~~~~~~l~~~l~~LH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~- 168 (308)
T cd06634 95 EYCL-GSASDLLEVHKKPLQEVEIAAVTHGALQGLAYLH----SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA- 168 (308)
T ss_pred EccC-CCHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHhEEECCCCcEEECCcccceeecCc-
Confidence 9996 6888888766566899999999999999999999 678999999999999999999999999999765432
Q ss_pred CcceeecccccccccCCCccC---CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 657 DSVTQTMTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
....++..|+|||.+. .+.++.++|||||||++|||++|+.||...... .....+.....+
T Consensus 169 -----~~~~~~~~y~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~-~~~~~~~~~~~~---------- 232 (308)
T cd06634 169 -----NXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAM-SALYHIAQNESP---------- 232 (308)
T ss_pred -----ccccCCccccCHHHHhhcccCCCCcccchHHHHHHHHHHHcCCCCCccccHH-HHHHHHhhcCCC----------
Confidence 1235788999999863 456888999999999999999999998653111 111111110000
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
......++..+.+++.+||+.+|++||++.++++.-
T Consensus 233 -------~~~~~~~~~~~~~li~~cl~~~P~~Rp~~~~ll~~~ 268 (308)
T cd06634 233 -------ALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHR 268 (308)
T ss_pred -------CcCcccccHHHHHHHHHHhhCCcccCCCHHHHhhCc
Confidence 001113456678999999999999999999998653
No 354
>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do
Probab=100.00 E-value=2.8e-33 Score=289.02 Aligned_cols=243 Identities=22% Similarity=0.260 Sum_probs=187.8
Q ss_pred cccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHH-HhccCCccceeeeeeccCCeeeEEEecCCC
Q 003855 507 NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVL-RNVRHRNLIKILSSCSNPDFKALVLEFMPN 581 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l-~~l~h~niv~l~~~~~~~~~~~lv~e~~~~ 581 (791)
+.||+|+||.||+|... +++.||+|++.... ......+..|..++ ...+|||++++++++...+..++|+||+++
T Consensus 2 ~~l~~g~~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~ 81 (260)
T cd05611 2 KPISKGAFGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSFQSKDYLYLVMEYLNG 81 (260)
T ss_pred ccCCcCCCeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeEEcCCeEEEEEeccCC
Confidence 57999999999999864 68999999986542 22223344454444 445899999999999999999999999999
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||++++++.++|+|||+++.... .
T Consensus 82 ~~L~~~l~~~~-~~~~~~~~~i~~qi~~aL~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~------~ 150 (260)
T cd05611 82 GDCASLIKTLG-GLPEDWAKQYIAEVVLGVEDLH----QRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLE------N 150 (260)
T ss_pred CCHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCcEEEeecccceeccc------c
Confidence 99999997654 3789999999999999999999 67899999999999999999999999999875432 1
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
....++..|+|||...+..++.++||||||+++|||++|..||...... ........... ... .
T Consensus 151 ~~~~~~~~y~~pe~~~~~~~~~~~Dv~slG~il~~l~~g~~p~~~~~~~-~~~~~~~~~~~--~~~-------------~ 214 (260)
T cd05611 151 KKFVGTPDYLAPETILGVGDDKMSDWWSLGCVIFEFLFGYPPFHAETPD-AVFDNILSRRI--NWP-------------E 214 (260)
T ss_pred ccCCCCcCccChhhhcCCCCcchhhhHHHHHHHHHHHHCCCCCCCCCHH-HHHHHHHhccc--CCC-------------C
Confidence 2235788999999988888999999999999999999999999653221 11111100000 000 0
Q ss_pred HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 742 SAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 742 ~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
.....++..+.+++.+||+.+|++||++.++.+.+
T Consensus 215 ~~~~~~~~~~~~~i~~~l~~~p~~R~~~~~~~~~l 249 (260)
T cd05611 215 EVKEFCSPEAVDLINRLLCMDPAKRLGANGYQEIK 249 (260)
T ss_pred cccccCCHHHHHHHHHHccCCHHHccCCCcHHHHH
Confidence 01113556788999999999999999876665543
No 355
>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati
Probab=100.00 E-value=1.9e-33 Score=301.39 Aligned_cols=271 Identities=25% Similarity=0.296 Sum_probs=201.4
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehh--hhHHHHHHHHHHHHHHhccCCccceeeeeeccC-----Ce
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSCSNP-----DF 571 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~ 571 (791)
.++|.+.+.||+|+||+||+|+.. +++.||||.+... .......+..|+.+++.++||||+++++++... ..
T Consensus 4 ~~~y~~~~~lg~G~~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~~~~~~~~ 83 (337)
T cd07858 4 DTKYVPIKPIGRGAYGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPPHREAFND 83 (337)
T ss_pred ccceeEEEEeccCCCeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecccccccCc
Confidence 467999999999999999999864 7899999988643 223345677899999999999999999987543 35
Q ss_pred eeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 572 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
.++|+||+. ++|.+++.... .+++..+..++.|++.||.||| +.+++||||||+||+++.++.+||+|||+++.
T Consensus 84 ~~lv~e~~~-~~L~~~~~~~~-~l~~~~~~~i~~qi~~aL~~LH----~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~ 157 (337)
T cd07858 84 VYIVYELMD-TDLHQIIRSSQ-TLSDDHCQYFLYQLLRGLKYIH----SANVLHRDLKPSNLLLNANCDLKICDFGLART 157 (337)
T ss_pred EEEEEeCCC-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEECcCccccc
Confidence 799999995 69999887654 4899999999999999999999 67899999999999999999999999999987
Q ss_pred cCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC----Ch
Q 003855 652 LGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH----GL 726 (791)
Q Consensus 652 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~----~~ 726 (791)
...... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||..... ...... +...... ..
T Consensus 158 ~~~~~~--~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~-~~~~~~-~~~~~~~~~~~~~ 233 (337)
T cd07858 158 TSEKGD--FMTEYVVTRWYRAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDY-VHQLKL-ITELLGSPSEEDL 233 (337)
T ss_pred cCCCcc--cccccccccCccChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCCh-HHHHHH-HHHHhCCCChHHh
Confidence 643321 1223457889999997654 5688999999999999999999999965321 111111 1110000 00
Q ss_pred hhhcchhhhhh---------HHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHH
Q 003855 727 TEVVDANLVRE---------EQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK--LKKIK 780 (791)
Q Consensus 727 ~~~~d~~~~~~---------~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~--L~~~~ 780 (791)
..+.+...... .........++.++.+++.+|++.+|++|||+.|+++. ++.+.
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rps~~ell~h~~~~~~~ 298 (337)
T cd07858 234 GFIRNEKARRYIRSLPYTPRQSFARLFPHANPLAIDLLEKMLVFDPSKRITVEEALAHPYLASLH 298 (337)
T ss_pred hhcCchhhhHHHHhcCcccccCHHHHcccCCHHHHHHHHHHhcCChhhccCHHHHHcCcchhhhc
Confidence 00011000000 00001112456778999999999999999999999876 65543
No 356
>PLN00009 cyclin-dependent kinase A; Provisional
Probab=100.00 E-value=2.1e-33 Score=295.51 Aligned_cols=265 Identities=23% Similarity=0.294 Sum_probs=195.7
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
++|++.+.||+|++|.||+|+.. +++.||+|.+.... ....+.+..|++++++++||||+++++++.+....++|||
T Consensus 2 ~~y~~~~~l~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv~e 81 (294)
T PLN00009 2 DQYEKVEKIGEGTYGVVYKARDRVTNETIALKKIRLEQEDEGVPSTAIREISLLKEMQHGNIVRLQDVVHSEKRLYLVFE 81 (294)
T ss_pred CceEEEEEecCCCCEEEEEEEecCCCcEEEEEehhhccccccchHHHHHHHHHHHhccCCCEeeEEEEEecCCeEEEEEe
Confidence 57889999999999999999975 78999999886432 2334567889999999999999999999999999999999
Q ss_pred cCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC-CCcEEEeeeccccccCCC
Q 003855 578 FMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE-NMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfgla~~~~~~ 655 (791)
|++ +++.+++.... ...++..+..++.||+.||+||| +.+++||||+|+||++++ ++.+||+|||++......
T Consensus 82 ~~~-~~l~~~~~~~~~~~~~~~~~~~~~~qi~~aL~~LH----~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~ 156 (294)
T PLN00009 82 YLD-LDLKKHMDSSPDFAKNPRLIKTYLYQILRGIAYCH----SHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIP 156 (294)
T ss_pred ccc-ccHHHHHHhCCCCCcCHHHHHHHHHHHHHHHHHHH----hCCeeCCCCCcceEEEECCCCEEEEcccccccccCCC
Confidence 995 58888886543 33678888899999999999999 678999999999999985 567999999999765432
Q ss_pred CCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhh-----
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEV----- 729 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----- 729 (791)
.. ......++..|+|||++.+ ..++.++||||+||++|+|+||+.||...... ..+.+... .........
T Consensus 157 ~~--~~~~~~~~~~y~~PE~~~~~~~~~~~~Dv~slG~i~~~l~tg~~pf~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~ 232 (294)
T PLN00009 157 VR--TFTHEVVTLWYRAPEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEI-DELFKIFR-ILGTPNEETWPGVT 232 (294)
T ss_pred cc--ccccCceeecccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHH-HhCCCChhhccccc
Confidence 11 1223356889999998765 45789999999999999999999998653221 11111111 000000000
Q ss_pred --cchh--hhh--hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 730 --VDAN--LVR--EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 730 --~d~~--~~~--~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.+.. ... ...........+.++.+++.+|++.+|++||++.++++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~P~~Rps~~~~l~ 283 (294)
T PLN00009 233 SLPDYKSAFPKWPPKDLATVVPTLEPAGVDLLSKMLRLDPSKRITARAALE 283 (294)
T ss_pred cchhhhhhcccCCCCCHHHhCcCCChHHHHHHHHHccCChhhCcCHHHHhc
Confidence 0000 000 00000011124566889999999999999999999986
No 357
>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3. Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co
Probab=100.00 E-value=3.9e-33 Score=295.72 Aligned_cols=244 Identities=27% Similarity=0.317 Sum_probs=194.3
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
|...+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|+.+++.++|||++++++++.+.+..++||||
T Consensus 23 ~~~~~~lg~g~~g~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~lv~e~ 102 (313)
T cd06633 23 FVGLHEIGHGSFGAVYFATNSHTNEVVAVKKMSYSGKQTNEKWQDIIKEVKFLQQLKHPNTIEYKGCYLKEHTAWLVMEY 102 (313)
T ss_pred hhcceeeccCCCeEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHHhCCCCCCccEEEEEEeCCEEEEEEec
Confidence 556678999999999999864 68899999986432 33456788899999999999999999999999999999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+. |++.+++......+++.++..++.|++.|+.||| +.+++||||+|+||+++.++.+||+|||++......
T Consensus 103 ~~-~~l~~~l~~~~~~l~~~~~~~~~~qi~~al~~LH----~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~--- 174 (313)
T cd06633 103 CL-GSASDLLEVHKKPLQEVEIAAITHGALQGLAYLH----SHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPA--- 174 (313)
T ss_pred CC-CCHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCChhhEEECCCCCEEEeecCCCcccCCC---
Confidence 95 6888888766666899999999999999999999 678999999999999999999999999998653221
Q ss_pred ceeecccccccccCCCccC---CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhh
Q 003855 659 VTQTMTMATIGYMAPEYGS---EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLV 735 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~---~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 735 (791)
....|+..|+|||++. .+.++.++|||||||++|||++|..||....... ....... ......
T Consensus 175 ---~~~~~~~~y~aPE~~~~~~~~~~~~~sDv~slGvil~el~~g~~p~~~~~~~~--~~~~~~~---~~~~~~------ 240 (313)
T cd06633 175 ---NSFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMS--ALYHIAQ---NDSPTL------ 240 (313)
T ss_pred ---CCccccccccChhhccccCCCCCCchhhHHHHHHHHHHHHhCCCCCCCCChHH--HHHHHHh---cCCCCC------
Confidence 2245788999999873 4668889999999999999999999986532111 1111110 000000
Q ss_pred hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 736 REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
....++..+.+++.+|++.+|.+||++.++++.
T Consensus 241 -------~~~~~~~~l~~li~~~l~~~P~~Rp~~~~~l~~ 273 (313)
T cd06633 241 -------QSNEWTDSFRGFVDYCLQKIPQERPASAELLRH 273 (313)
T ss_pred -------CccccCHHHHHHHHHHccCChhhCcCHHHHhcC
Confidence 011233557899999999999999999999863
No 358
>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases. Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho
Probab=100.00 E-value=6.9e-33 Score=286.73 Aligned_cols=250 Identities=23% Similarity=0.284 Sum_probs=196.6
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehh-----hhHHHHHHHHHHHHHHhccCCccceeeeeeccC--Cee
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ-----LERAFRSFDSECEVLRNVRHRNLIKILSSCSNP--DFK 572 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~--~~~ 572 (791)
.+|++.+.||+|+||.||+|... ++..||+|++... ..+....+.+|++++++++||||+++++++.+. ...
T Consensus 2 ~~~~~~~~lg~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~~~ei~~l~~l~h~~i~~~~~~~~~~~~~~~ 81 (264)
T cd06653 2 VNWRLGKLLGRGAFGEVYLCYDADTGRELAVKQVPFDPDSQETSKEVNALECEIQLLKNLRHDRIVQYYGCLRDPEEKKL 81 (264)
T ss_pred CceeeeeeEccCCCeEEEEEEEcCCCCEEEEEEEecCcccchhhHHHHHHHHHHHHHHHcCCCCcceEEEEEEcCCCCEE
Confidence 47889999999999999999864 6899999987532 133456788999999999999999999998654 457
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++|+||+++++|.+++..... +++..+.+++.|++.|+.||| +.+++|+||||+||+++.++.++|+|||+++..
T Consensus 82 ~~v~e~~~~~~L~~~~~~~~~-l~~~~~~~~~~~i~~al~~LH----~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~ 156 (264)
T cd06653 82 SIFVEYMPGGSIKDQLKAYGA-LTENVTRRYTRQILQGVSYLH----SNMIVHRDIKGANILRDSAGNVKLGDFGASKRI 156 (264)
T ss_pred EEEEEeCCCCcHHHHHHHcCC-CCHHHHHHHHHHHHHHHHHHH----hCCEecCCCCHHHEEEcCCCCEEECcccccccc
Confidence 899999999999999986543 788899999999999999999 678999999999999999999999999999865
Q ss_pred CCCCC-cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcc
Q 003855 653 GEGED-SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVD 731 (791)
Q Consensus 653 ~~~~~-~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d 731 (791)
..... ........++..|+|||+..+..++.++|||||||++|||++|+.||......+ ...+. .......
T Consensus 157 ~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~-~~~~~----~~~~~~~--- 228 (264)
T cd06653 157 QTICMSGTGIKSVTGTPYWMSPEVISGEGYGRKADVWSVACTVVEMLTEKPPWAEYEAMA-AIFKI----ATQPTKP--- 228 (264)
T ss_pred ccccccCccccccCCcccccCHhhhcCCCCCccccHHHHHHHHHHHHhCCCCCCccCHHH-HHHHH----HcCCCCC---
Confidence 32111 111123457889999999988889999999999999999999999987531111 11111 0000000
Q ss_pred hhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 732 ANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 732 ~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+.....++.+++.+|++ +|..||++.+++.
T Consensus 229 ----------~~p~~~~~~~~~~i~~~l~-~~~~r~~~~~~~~ 260 (264)
T cd06653 229 ----------MLPDGVSDACRDFLKQIFV-EEKRRPTAEFLLR 260 (264)
T ss_pred ----------CCCcccCHHHHHHHHHHhc-CcccCccHHHHhc
Confidence 0112344668899999999 5799999998764
No 359
>KOG0604 consensus MAP kinase-activated protein kinase 2 [Signal transduction mechanisms]
Probab=100.00 E-value=2.7e-34 Score=274.22 Aligned_cols=250 Identities=22% Similarity=0.279 Sum_probs=196.6
Q ss_pred Hhhccccc-cccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeecc----CCe
Q 003855 499 ATDEFNEC-NLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCSN----PDF 571 (791)
Q Consensus 499 ~~~~~~~~-~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~ 571 (791)
.+++|.+. ++||-|-.|.|-.+..+ +|+.+|+|++.... ...+|++.--.. .|||||+++++|.+ ...
T Consensus 59 itedY~is~qvLG~GinGkV~~C~~k~T~ekfALKvL~Ds~-----KARrEVeLHw~~s~h~~iV~IidVyeNs~~~rkc 133 (400)
T KOG0604|consen 59 ITEDYSISWQVLGAGINGKVVQCVHKRTQEKFALKVLLDSP-----KARREVELHWMASGHPHIVSIIDVYENSYQGRKC 133 (400)
T ss_pred chhhheehhhhhccccCCceEEEEeccchhhhHHHHHhcCH-----HHHhHhhhhhhhcCCCceEEeehhhhhhccCcee
Confidence 45666654 57999999999998865 89999999886432 234466655444 69999999999854 355
Q ss_pred eeEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC---CCCcEEEeeec
Q 003855 572 KALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD---ENMAAHVSDFG 647 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~---~~~~~kl~Dfg 647 (791)
..+|||.|+||.|.+.++.++ ..+++.++..|+.||+.|+.||| +..|+||||||+|+|.+ .+..+|++|||
T Consensus 134 LLiVmE~meGGeLfsriq~~g~~afTErea~eI~~qI~~Av~~lH----~~nIAHRDlKpENLLyt~t~~na~lKLtDfG 209 (400)
T KOG0604|consen 134 LLIVMECMEGGELFSRIQDRGDQAFTEREASEIMKQIGLAVRYLH----SMNIAHRDLKPENLLYTTTSPNAPLKLTDFG 209 (400)
T ss_pred eEeeeecccchHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHH----hcchhhccCChhheeeecCCCCcceEecccc
Confidence 678999999999999999764 46899999999999999999999 78999999999999996 46679999999
Q ss_pred cccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChh
Q 003855 648 ISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLT 727 (791)
Q Consensus 648 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~ 727 (791)
+|+.-.. .......+-|+.|.|||++...+|+..+|+||+||++|-|++|.+||....... +.
T Consensus 210 FAK~t~~---~~~L~TPc~TPyYvaPevlg~eKydkscdmwSlgVimYIlLCGyPPFYS~hg~a--------------is 272 (400)
T KOG0604|consen 210 FAKETQE---PGDLMTPCFTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLA--------------IS 272 (400)
T ss_pred cccccCC---CccccCCcccccccCHHHhCchhcCCCCCccchhHHHHHhhcCCCcccccCCcc--------------CC
Confidence 9986543 223344567999999999999999999999999999999999999997543211 11
Q ss_pred hhcchhhhhhHH--hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 728 EVVDANLVREEQ--AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 728 ~~~d~~~~~~~~--~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.-...++..... ..+++.+.+++..++|+.+|..+|++|.|+.|++.
T Consensus 273 pgMk~rI~~gqy~FP~pEWs~VSe~aKdlIR~LLkt~PteRlTI~~~m~ 321 (400)
T KOG0604|consen 273 PGMKRRIRTGQYEFPEPEWSCVSEAAKDLIRKLLKTEPTERLTIEEVMD 321 (400)
T ss_pred hhHHhHhhccCccCCChhHhHHHHHHHHHHHHHhcCCchhheeHHHhhc
Confidence 111111111111 12456678899999999999999999999999875
No 360
>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase. Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co
Probab=100.00 E-value=8.3e-33 Score=288.16 Aligned_cols=241 Identities=21% Similarity=0.294 Sum_probs=185.4
Q ss_pred ccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHH---HHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 508 LLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSEC---EVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 508 ~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~---~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
.||+|+||.||+|... +++.||+|.+.... ......+..|. ..++...||+|+++.+++.+.+..++||||++
T Consensus 1 ~ig~g~~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (278)
T cd05606 1 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLSFILDLMN 80 (278)
T ss_pred CcccCCCeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeeeecCCEEEEEEecCC
Confidence 4899999999999864 68899999886532 11112233343 34444579999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+|+|.+++.... .+++..+..++.|++.|+.||| +.+|+||||||+||++++++.++|+|||+++......
T Consensus 81 g~~L~~~l~~~~-~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~---- 151 (278)
T cd05606 81 GGDLHYHLSQHG-VFSEAEMRFYAAEIILGLEHMH----NRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKK---- 151 (278)
T ss_pred CCcHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccC----
Confidence 999999887654 4899999999999999999999 6789999999999999999999999999997653321
Q ss_pred eecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 661 QTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
.....|+..|+|||+..++ .++.++||||+||++|||++|+.||................. ...
T Consensus 152 ~~~~~~~~~y~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~~--------~~~------- 216 (278)
T cd05606 152 PHASVGTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLT--------MAV------- 216 (278)
T ss_pred CcCcCCCcCCcCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCCCccchHHHHHHhhc--------cCC-------
Confidence 1234689999999998654 689999999999999999999999976422111110000000 000
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRI-----NVTDAAA 774 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~ 774 (791)
..+..++..+.+++.+|+..+|++|| ++.++++
T Consensus 217 --~~~~~~s~~~~~li~~~l~~~p~~R~~~~~~~~~~ll~ 254 (278)
T cd05606 217 --ELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGAQEVKE 254 (278)
T ss_pred --CCCCcCCHHHHHHHHHHhhcCHHhccCCCCCCHHHHHh
Confidence 01112346678999999999999999 9999975
No 361
>KOG0612 consensus Rho-associated, coiled-coil containing protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=2.3e-34 Score=318.54 Aligned_cols=258 Identities=22% Similarity=0.340 Sum_probs=208.1
Q ss_pred hHHHHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehh---hhHHHHHHHHHHHHHHhccCCccceeeeeeccC
Q 003855 494 LDIQRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ---LERAFRSFDSECEVLRNVRHRNLIKILSSCSNP 569 (791)
Q Consensus 494 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~---~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~ 569 (791)
.+++-..++|.++++||+|+||.|..++.+ +++.||.|++.+- .+....-|..|-.+|..-+.+.|++++.+|.+.
T Consensus 68 ~~lrl~~~DfeilKvIGrGaFGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAFQD~ 147 (1317)
T KOG0612|consen 68 KELRLKAEDFEILKVIGRGAFGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAFQDE 147 (1317)
T ss_pred HHHhCCHHhhHHHHHhcccccceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHhcCc
Confidence 345566789999999999999999999975 7889999998763 244456788899999999999999999999999
Q ss_pred CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
.+.|+|||||+||||-..+.+.. .+++..+..++..|+-||.-+| +.|+|||||||+|||+|..|++|++|||.+
T Consensus 148 ~~LYlVMdY~pGGDlltLlSk~~-~~pE~~ArFY~aEiVlAldslH----~mgyVHRDiKPDNvLld~~GHikLADFGsC 222 (1317)
T KOG0612|consen 148 RYLYLVMDYMPGGDLLTLLSKFD-RLPEDWARFYTAEIVLALDSLH----SMGYVHRDIKPDNVLLDKSGHIKLADFGSC 222 (1317)
T ss_pred cceEEEEecccCchHHHHHhhcC-CChHHHHHHHHHHHHHHHHHHH----hccceeccCCcceeEecccCcEeeccchhH
Confidence 99999999999999999999887 6888888889999999999999 889999999999999999999999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccC----C-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGS----E-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH 724 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~----~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~ 724 (791)
-.+..++ .......+|||.|++||++. + +.|++.+|+||+||++|||+.|..||..- ++..-+..
T Consensus 223 lkm~~dG-~V~s~~aVGTPDYISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYad-----slveTY~K---- 292 (1317)
T KOG0612|consen 223 LKMDADG-TVRSSVAVGTPDYISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYAD-----SLVETYGK---- 292 (1317)
T ss_pred HhcCCCC-cEEeccccCCCCccCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHH-----HHHHHHHH----
Confidence 8876543 34556678999999999753 3 67999999999999999999999998641 11111111
Q ss_pred ChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCC---HHHHHH
Q 003855 725 GLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRIN---VTDAAA 774 (791)
Q Consensus 725 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt---~~ev~~ 774 (791)
+.+. .+.-.+|...+++.+..++|.+.+. +|+.|.. +.|+..
T Consensus 293 ----Im~h---k~~l~FP~~~~VSeeakdLI~~ll~-~~e~RLgrngiedik~ 337 (1317)
T KOG0612|consen 293 ----IMNH---KESLSFPDETDVSEEAKDLIEALLC-DREVRLGRNGIEDIKN 337 (1317)
T ss_pred ----Hhch---hhhcCCCcccccCHHHHHHHHHHhc-ChhhhcccccHHHHHh
Confidence 1111 0001122223466777889988775 7888887 777654
No 362
>KOG0669 consensus Cyclin T-dependent kinase CDK9 [Cell cycle control, cell division, chromosome partitioning]
Probab=100.00 E-value=3.2e-35 Score=273.56 Aligned_cols=269 Identities=20% Similarity=0.291 Sum_probs=199.2
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehh--hhHHHHHHHHHHHHHHhccCCccceeeeeecc--------C
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQ--LERAFRSFDSECEVLRNVRHRNLIKILSSCSN--------P 569 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~--~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~--------~ 569 (791)
..|+...+||+|.||+||+|+.+ +|+.||+|++-.+ .+.......+|++++..++|+|++.+++.|.. .
T Consensus 17 ~~yek~~kigqGtfgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r 96 (376)
T KOG0669|consen 17 SKYEKLAKIGQGTFGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDR 96 (376)
T ss_pred hHHHHHHhcCCchHHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCccccc
Confidence 45667789999999999999864 6888999865432 23334456789999999999999999998843 3
Q ss_pred CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
...|+||++|+. +|.-.+......++..++.+++.++..||.|+| ...|+|||+||.|+|++.+|.+||+|||+|
T Consensus 97 ~t~ylVf~~ceh-DLaGlLsn~~vr~sls~Ikk~Mk~Lm~GL~~iH----r~kilHRDmKaaNvLIt~dgilklADFGla 171 (376)
T KOG0669|consen 97 ATFYLVFDFCEH-DLAGLLSNRKVRFSLSEIKKVMKGLMNGLYYIH----RNKILHRDMKAANVLITKDGILKLADFGLA 171 (376)
T ss_pred ceeeeeHHHhhh-hHHHHhcCccccccHHHHHHHHHHHHHHHHHHH----HhhHHhhcccHhhEEEcCCceEEeeccccc
Confidence 457899999987 999999887677999999999999999999999 678999999999999999999999999999
Q ss_pred cccCCCC--CcceeecccccccccCCCcc-CCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcc--hHHHHHHHhcCC
Q 003855 650 KLLGEGE--DSVTQTMTMATIGYMAPEYG-SEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEM--SLRRWVKESLPH 724 (791)
Q Consensus 650 ~~~~~~~--~~~~~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~--~~~~~~~~~~~~ 724 (791)
+.+.... .....+..+.|.+|++||.+ ....|+++.|||+.|||+.||+||.+-+.+..+... .++......-++
T Consensus 172 r~fs~~~n~~kprytnrvvTLwYrppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tke 251 (376)
T KOG0669|consen 172 RAFSTSKNVVKPRYTNRVVTLWYRPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKE 251 (376)
T ss_pred cceecccccCCCCcccceeeeecCCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcc
Confidence 7664332 22345667889999999965 557899999999999999999999988765322211 112222222222
Q ss_pred ChhhhcchhhhhhH-------HhhHHHHHH------HHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 725 GLTEVVDANLVREE-------QAFSAKMDC------ILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 725 ~~~~~~d~~~~~~~-------~~~~~~~~~------~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
-+.++..-.+...- .......+. ..+..+++..++..||.+||++.+++.
T Consensus 252 vWP~~d~lpL~~sie~ePl~~~~~rkv~n~~kp~~kd~~a~dLle~ll~~DP~kR~~ad~aln 314 (376)
T KOG0669|consen 252 VWPNVDNLPLYQSIELEPLPKGQKRKVKNRLKPYVKDDEALDLLEKLLKLDPTKRIDADQALN 314 (376)
T ss_pred cCCCcccchHHHhccCCCCCcchhhhhhhhcccccCChhHHHHHHHHhccCcccCcchHhhhc
Confidence 12111111110000 000011111 236779999999999999999998875
No 363
>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both
Probab=100.00 E-value=6.7e-33 Score=290.76 Aligned_cols=261 Identities=25% Similarity=0.310 Sum_probs=195.9
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhc---cCCccceeeeeeccCCe-----
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNV---RHRNLIKILSSCSNPDF----- 571 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l---~h~niv~l~~~~~~~~~----- 571 (791)
|++.+.||+|+||.||+|+.+ +++.||+|++.... ......+.+|+.+++++ +|||++++++++...+.
T Consensus 1 y~~~~~l~~g~~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~~~~~~~~ 80 (287)
T cd07838 1 YEELAEIGEGAYGTVYKARDLNTGRFVALKKVRVPLSEEGIPLSTLREIALLKQLESFEHPNIVRLLDVCHGPRTDRELK 80 (287)
T ss_pred CeEEEEecccCceEEEEEEECCCCCEEEEEEeccccccchhhhhHHHHHHHHHHhhccCCCCcceEEEEEeeccCCCCce
Confidence 567889999999999999986 58999999986432 22234566677777666 59999999999987766
Q ss_pred eeEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccc
Q 003855 572 KALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISK 650 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 650 (791)
.+++|||+. ++|.+++.... ..+++..+..++.|+++||.||| +.+++|+||+|+||++++++.+||+|||++.
T Consensus 81 ~~l~~e~~~-~~l~~~l~~~~~~~l~~~~~~~~~~~i~~al~~LH----~~~i~h~~l~~~nili~~~~~~~l~dfg~~~ 155 (287)
T cd07838 81 LTLVFEHVD-QDLATYLSKCPKPGLPPETIKDLMRQLLRGVDFLH----SHRIVHRDLKPQNILVTSDGQVKIADFGLAR 155 (287)
T ss_pred eEEEehhcc-cCHHHHHHHccCCCCCHHHHHHHHHHHHHHHHHHH----HCCeeeccCChhhEEEccCCCEEEeccCcce
Confidence 899999996 58999887543 35899999999999999999999 6789999999999999999999999999998
Q ss_pred ccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC-h---
Q 003855 651 LLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG-L--- 726 (791)
Q Consensus 651 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~--- 726 (791)
.+..... .....++..|+|||+..+..++.++|||||||++|||++|+.||..... ...+.++........ .
T Consensus 156 ~~~~~~~---~~~~~~~~~~~~PE~~~~~~~~~~~Di~s~G~~l~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 231 (287)
T cd07838 156 IYSFEMA---LTSVVVTLWYRAPEVLLQSSYATPVDMWSVGCIFAELFRRRPLFRGTSE-ADQLDKIFDVIGLPSEEEWP 231 (287)
T ss_pred eccCCcc---cccccccccccChHHhccCCCCCcchhhhHHHHHHHHHhCCCcccCCCh-HHHHHHHHHHcCCCChHhcC
Confidence 7643322 1223468889999999888999999999999999999999999875322 222222222111100 0
Q ss_pred ------hhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 727 ------TEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 727 ------~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
............ .......+..+.+++.+||+.||++||++.|+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~li~~~l~~dp~~Rp~~~~il~ 283 (287)
T cd07838 232 RNVSLPRSSFPSYTPRSF--KSFVPEICEEGLDLLKKMLTFNPHKRISAFEALQ 283 (287)
T ss_pred CCcccchhhcccccccch--hhhhhhhhHHHHHHHHHHhccCCccCCCHHHHhc
Confidence 000000000000 0111234567889999999999999999999875
No 364
>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines
Probab=100.00 E-value=3e-33 Score=293.48 Aligned_cols=255 Identities=25% Similarity=0.290 Sum_probs=199.1
Q ss_pred ccccccccCCCcceEEEEEEe----cCCcEEEEEEeehhh----hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCee
Q 003855 502 EFNECNLLGTGSFGSVYKGTI----SDGTDVAIKIFNLQL----ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFK 572 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 572 (791)
+|++.+.||+|+||.||+++. .+++.||||++.... ....+.+..|+.++.++ +||||+++++++......
T Consensus 1 ~~~~~~~ig~G~~~~vy~~~~~~~~~~~~~~avk~~~~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~~~~~~~~~~~~ 80 (288)
T cd05583 1 NFELLRVLGTGAYGKVFLVRKVGGHDAGKLYAMKVLKKATIVQKAKTAEHTRTERQVLEAVRRCPFLVTLHYAFQTDTKL 80 (288)
T ss_pred CceEEEEeccCCCceEEEEEEeccccCCcEEEEEEEehHHHHhhhhHHHHHHHHHHHHHhccCCcchhhhheeeecCCEE
Confidence 477889999999999999974 357889999987432 23345678899999999 599999999999999999
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++||||+++|+|.+++.... .+++..+..++.|+++||.||| ..+++||||+|+||+++.++.++++|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~~~~~~-~~~~~~~~~~~~ql~~~l~~lH----~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~ 155 (288)
T cd05583 81 HLILDYVNGGELFTHLYQRE-HFTESEVRVYIAEIVLALDHLH----QLGIIYRDIKLENILLDSEGHVVLTDFGLSKEF 155 (288)
T ss_pred EEEEecCCCCcHHHHHhhcC-CcCHHHHHHHHHHHHHHHHHHH----HCCeeccCCCHHHeEECCCCCEEEEECcccccc
Confidence 99999999999999997654 4788999999999999999999 678999999999999999999999999999875
Q ss_pred CCCCCcceeecccccccccCCCccCCCC--CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 653 GEGEDSVTQTMTMATIGYMAPEYGSEGI--VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 653 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~--~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
...... ......|+..|+|||...+.. .+.++||||||+++|||++|..||..... ......+.......
T Consensus 156 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~il~el~tg~~p~~~~~~-~~~~~~~~~~~~~~------ 227 (288)
T cd05583 156 LAEEEE-RAYSFCGTIEYMAPEVIRGGSGGHDKAVDWWSLGVLTFELLTGASPFTVDGE-QNSQSEISRRILKS------ 227 (288)
T ss_pred cccccc-ccccccCCccccCHHHhcCCCCCCcchhhhHHHHHHHHHHHhCCCCcccCcc-cchHHHHHHHHHcc------
Confidence 443221 122345788999999876654 78899999999999999999999853211 11111111111000
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
..+.+..++..+.+++.+|++.+|++|||+.++.+.|+.
T Consensus 228 ---------~~~~~~~~~~~l~~li~~~l~~~p~~R~t~~~~~~~l~~ 266 (288)
T cd05583 228 ---------KPPFPKTMSAEARDFIQKLLEKDPKKRLGANGADEIKNH 266 (288)
T ss_pred ---------CCCCCcccCHHHHHHHHHHhcCCHhhccCcchHHHHhcC
Confidence 001112244667899999999999999999988776654
No 365
>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1. Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto
Probab=100.00 E-value=4.6e-33 Score=290.88 Aligned_cols=249 Identities=28% Similarity=0.396 Sum_probs=201.4
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhcc-CCccceeeeeeccCCeeeEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVR-HRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv 575 (791)
++|...+.||+|+||.||+|... +++.||+|++.... ....+.+..|+.++++++ ||||+++++++.+.+..++|
T Consensus 1 ~~y~~~~~lg~g~~~~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~~~~~~~~lv 80 (280)
T cd05581 1 DDFKFGKIIGEGSFSTVVLAKEKETNKEYAIKILDKRQLIKEKKVKYVKIEKEVLTRLNGHPGIIKLYYTFQDEENLYFV 80 (280)
T ss_pred CCceEeeeecCCCceEEEEEEEcCCCCEEEEEEechHhccchHHHHHHHHHHHHHHhcccCCCchhHHHHhcCCceEEEE
Confidence 46888999999999999999875 79999999987532 233467888999999998 99999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
|||+++++|.+++.+.. .+++..+..++.|++.||.||| +.+++|+||+|+||+++.++.++++|||++......
T Consensus 81 ~e~~~~~~L~~~l~~~~-~l~~~~~~~i~~ql~~~l~~Lh----~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~ 155 (280)
T cd05581 81 LEYAPNGELLQYIRKYG-SLDEKCTRFYAAEILLALEYLH----SKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPN 155 (280)
T ss_pred EcCCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----HCCeeecCCCHHHeEECCCCCEEecCCccccccCCc
Confidence 99999999999998764 4899999999999999999999 678999999999999999999999999999876443
Q ss_pred CCc------------------ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHH
Q 003855 656 EDS------------------VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRW 717 (791)
Q Consensus 656 ~~~------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~ 717 (791)
... .......++..|+|||......++.++||||+|++++++++|+.||..... ....+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pe~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~--~~~~~~ 233 (280)
T cd05581 156 SSPESNKGDATNIDSQIEKNRRRFASFVGTAEYVSPELLNEKPAGKSSDLWALGCIIYQMLTGKPPFRGSNE--YLTFQK 233 (280)
T ss_pred cccccCCCCCccccccccccccccccccCCccccCHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCccH--HHHHHH
Confidence 211 122233578899999998888899999999999999999999999875321 111010
Q ss_pred HHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCH----HHHHH
Q 003855 718 VKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINV----TDAAA 774 (791)
Q Consensus 718 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~----~ev~~ 774 (791)
+. .. ....+...+..+.+++.+|++.+|++||++ .|+++
T Consensus 234 ~~---~~---------------~~~~~~~~~~~~~~li~~~l~~~p~~R~~~~~~~~~ll~ 276 (280)
T cd05581 234 IL---KL---------------EYSFPPNFPPDAKDLIEKLLVLDPQDRLGVNEGYDELKA 276 (280)
T ss_pred HH---hc---------------CCCCCCccCHHHHHHHHHHhcCCHhhCCCcccCHHHHhc
Confidence 00 00 000111234667899999999999999999 77654
No 366
>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U
Probab=100.00 E-value=5.1e-33 Score=296.45 Aligned_cols=266 Identities=24% Similarity=0.309 Sum_probs=198.3
Q ss_pred HHHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeecc-CCe
Q 003855 496 IQRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSN-PDF 571 (791)
Q Consensus 496 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~-~~~ 571 (791)
+..++++|+..+.||+|+||.||+|... +++.||||++.... ....+.+..|++++++++||||+++.+++.. ...
T Consensus 5 ~~~~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~ 84 (328)
T cd07856 5 VFEITNRYVDLQPVGMGAFGLVCSARDQLTGQNVAIKKIMKPFSTPVLAKRTYRELKLLKHLRHENIISLSDIFISPLED 84 (328)
T ss_pred eeccccceEEEEeecccCCeEEEEEEECCCCCEEEEEEecccccccchhHHHHHHHHHHHhcCCCCeeeEeeeEecCCCc
Confidence 3456789999999999999999999865 78999999875432 2334667789999999999999999998865 567
Q ss_pred eeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 572 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
.++|+||+ +++|.+++.... +++..+..++.|+++||.||| ..+|+||||+|+||++++++.++|+|||.++.
T Consensus 85 ~~lv~e~~-~~~L~~~~~~~~--~~~~~~~~~~~ql~~aL~~LH----~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~ 157 (328)
T cd07856 85 IYFVTELL-GTDLHRLLTSRP--LEKQFIQYFLYQILRGLKYVH----SAGVVHRDLKPSNILINENCDLKICDFGLARI 157 (328)
T ss_pred EEEEeehh-ccCHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEeECCCCCEEeCccccccc
Confidence 88999998 669998887543 788888899999999999999 67899999999999999999999999999975
Q ss_pred cCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhh--
Q 003855 652 LGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTE-- 728 (791)
Q Consensus 652 ~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~-- 728 (791)
.... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||..... ......+. ........+
T Consensus 158 ~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~tg~~~f~~~~~-~~~~~~~~-~~~~~~~~~~~ 230 (328)
T cd07856 158 QDPQ-----MTGYVSTRYYRAPEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDH-VNQFSIIT-DLLGTPPDDVI 230 (328)
T ss_pred cCCC-----cCCCcccccccCceeeeccCCcCcHHHHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHH-HHhCCCCHHHH
Confidence 4321 122356788999998765 5689999999999999999999999865322 11111111 111000000
Q ss_pred --hcchh-------hhhhH--HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 729 --VVDAN-------LVREE--QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 729 --~~d~~-------~~~~~--~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..+.. +.... ........++..+.+++.+|++.+|++||++.+++..
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~ell~~ 288 (328)
T cd07856 231 NTICSENTLRFVQSLPKREPVPFSEKFKNADPSAIDLLEKMLVFDPQKRISAAEALAH 288 (328)
T ss_pred HhccchhhHHHHhhccccCCCcHHHHcCCCCHHHHHHHHHHcCCChhhCCCHHHHhcC
Confidence 00000 00000 0000111245778899999999999999999998764
No 367
>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins. Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic
Probab=100.00 E-value=3.2e-33 Score=296.84 Aligned_cols=267 Identities=22% Similarity=0.242 Sum_probs=196.1
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh--HHHHHHHHHHHHHHhccCCccceeeeeeccC-------
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE--RAFRSFDSECEVLRNVRHRNLIKILSSCSNP------- 569 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------- 569 (791)
.++|++.+.||+|+||.||+|+.. +++.||+|++..... .....+.+|++++++++||||+++++++.+.
T Consensus 7 ~~~y~~~~~lg~g~~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~ 86 (311)
T cd07866 7 LRDYEILGKLGEGTFGEVYKARQIKTGRVVALKKILMHNEKDGFPITALREIKILKKLKHPNVVPLIDMAVERPDKSKRK 86 (311)
T ss_pred cccEEEEEEeccCCCEEEEEEEECCCCcEEEEEEEEeccCCCCcchhHHHHHHHHHhcCCCCccchhhheeccccccccc
Confidence 578999999999999999999965 689999998864432 2234567899999999999999999887443
Q ss_pred -CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecc
Q 003855 570 -DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGI 648 (791)
Q Consensus 570 -~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgl 648 (791)
...++|+||+.+ ++.+.+......+++..+..++.|+++||+||| +.+++||||||+||++++++.++|+|||+
T Consensus 87 ~~~~~lv~~~~~~-~l~~~~~~~~~~~~~~~~~~i~~~l~~al~~lH----~~~i~H~dl~p~nil~~~~~~~~l~dfg~ 161 (311)
T cd07866 87 RGSVYMVTPYMDH-DLSGLLENPSVKLTESQIKCYMLQLLEGINYLH----ENHILHRDIKAANILIDNQGILKIADFGL 161 (311)
T ss_pred CceEEEEEecCCc-CHHHHHhccccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEECCCCCEEECcCcc
Confidence 346899999964 788888766556999999999999999999999 67899999999999999999999999999
Q ss_pred ccccCCCCCcc---------eeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHH
Q 003855 649 SKLLGEGEDSV---------TQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWV 718 (791)
Q Consensus 649 a~~~~~~~~~~---------~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~ 718 (791)
++......... ......+++.|+|||...+ ..++.++|||||||++|||++|+.||.+.... .......
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~il~el~~g~~~~~~~~~~-~~~~~~~ 240 (311)
T cd07866 162 ARPYDGPPPNPKGGGGGGTRKYTNLVVTRWYRPPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDI-DQLHLIF 240 (311)
T ss_pred chhccCCCcccccCCcccccccccceeccCcCChHHhhCCCccCchhHhHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHH
Confidence 98654332211 1122356888999997654 45889999999999999999999998653221 1111111
Q ss_pred HHhcCCC---------hhh----hcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 719 KESLPHG---------LTE----VVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 719 ~~~~~~~---------~~~----~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
....... ... ......... ...........+.+++.+|++.+|++|||+.|++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~~l~~~p~~R~t~~ell~ 307 (311)
T cd07866 241 KLCGTPTEETWPGWRSLPGCEGVHSFTNYPRT--LEERFGKLGPEGLDLLSKLLSLDPYKRLTASDALE 307 (311)
T ss_pred HHhCCCChhhchhhhhcccccccccCCCCCcc--HHHHcccCChhHHHHHHHHcccCcccCcCHHHHhc
Confidence 1100000 000 000000000 00011123366889999999999999999999875
No 368
>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili
Probab=100.00 E-value=8e-33 Score=289.50 Aligned_cols=262 Identities=22% Similarity=0.266 Sum_probs=194.9
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhhh-HHHHHHHHHHHHHHhcc-CCccceeeeeeccCCeeeEEEecC
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLE-RAFRSFDSECEVLRNVR-HRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
|++.+.||+|+||.||+|+.. +++.||||.+..... .......+|+..+++++ |||++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~g~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~~~lv~e~~ 80 (283)
T cd07830 1 YKVIKQLGDGTFGSVYLARNKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNEHPNIVKLKEVFRENDELYFVFEYM 80 (283)
T ss_pred CeeheeeccCCceEEEEEEECCCCcEEEEEEehhhccchhHHHHHHHHHHHHhccCCCCchhHHHHhhcCCcEEEEEecC
Confidence 567789999999999999975 578899998865432 22234456899999998 999999999999999999999999
Q ss_pred CCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCc
Q 003855 580 PNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDS 658 (791)
Q Consensus 580 ~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~ 658 (791)
+|+|.+++.... ..+++..+..++.|++.||.||| +.+++|+||+|+||++++++.++|+|||+++.......
T Consensus 81 -~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~Lh----~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~- 154 (283)
T cd07830 81 -EGNLYQLMKDRKGKPFSESVIRSIIYQILQGLAHIH----KHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPP- 154 (283)
T ss_pred -CCCHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCC-
Confidence 889999988654 45899999999999999999999 67899999999999999999999999999986643322
Q ss_pred ceeecccccccccCCCccC-CCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC----------hh
Q 003855 659 VTQTMTMATIGYMAPEYGS-EGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG----------LT 727 (791)
Q Consensus 659 ~~~~~~~g~~~y~aPE~~~-~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----------~~ 727 (791)
.....++..|+|||+.. ...++.++||||||+++|||++|+.||......+ .+.. +....... ..
T Consensus 155 --~~~~~~~~~~~aPE~~~~~~~~~~~~Di~s~G~~l~el~~g~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~ 230 (283)
T cd07830 155 --YTDYVSTRWYRAPEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEID-QLYK-ICSVLGTPTKQDWPEGYKLA 230 (283)
T ss_pred --cCCCCCcccccCceeeecCcCcCCccchhhHHHHHHHHHhCCCccCCCChHH-HHHH-HHHhcCCCChhhhhhHhhhh
Confidence 12245788999999764 4568899999999999999999999986532111 1110 00000000 00
Q ss_pred hhcchhhhhhH--HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 728 EVVDANLVREE--QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 728 ~~~d~~~~~~~--~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...+..+.... .........+..+.+++.+|++.+|++||++.|++.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~cl~~~p~~Rpt~~ei~~ 279 (283)
T cd07830 231 SKLGFRFPQFAPTSLHQLIPNASPEAIDLIKDMLRWDPKKRPTASQALQ 279 (283)
T ss_pred ccccccccccccccHHHHcccCCHHHHHHHHHhcccCcccCCCHHHHhh
Confidence 00000000000 000000112466889999999999999999999975
No 369
>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14
Probab=100.00 E-value=8.9e-33 Score=296.97 Aligned_cols=271 Identities=23% Similarity=0.284 Sum_probs=200.6
Q ss_pred ChhHHHHHhhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeecc
Q 003855 492 PYLDIQRATDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSN 568 (791)
Q Consensus 492 ~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 568 (791)
...++..++++|...+.||+|+||.||+|.. .+++.||+|++.... ....+.+.+|+.++++++||||+++++++..
T Consensus 8 ~~~~~~~~~~~y~~~~~lg~G~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~ 87 (345)
T cd07877 8 LNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTP 87 (345)
T ss_pred HHHHHhhccCceEEEEEeeecCCeEEEEEEEcCCCeEEEEEEecCcchhhHHHHHHHHHHHHHHHcCCCcccceeeeeee
Confidence 3456777889999999999999999999985 478999999986532 2234567789999999999999999998753
Q ss_pred C------CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEE
Q 003855 569 P------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAH 642 (791)
Q Consensus 569 ~------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~k 642 (791)
. ...+++++++ +++|.+++.... +++..+..++.|+++|++||| +.+|+||||||+||++++++.+|
T Consensus 88 ~~~~~~~~~~~lv~~~~-~~~L~~~~~~~~--l~~~~~~~i~~qi~~aL~~LH----~~~ivH~dlkp~NIll~~~~~~k 160 (345)
T cd07877 88 ARSLEEFNDVYLVTHLM-GADLNNIVKCQK--LTDDHVQFLIYQILRGLKYIH----SADIIHRDLKPSNLAVNEDCELK 160 (345)
T ss_pred cccccccccEEEEehhc-ccCHHHHHhcCC--CCHHHHHHHHHHHHHHHHHHH----HCCeeecCCChHHEEEcCCCCEE
Confidence 2 3467888877 789998886543 899999999999999999999 67899999999999999999999
Q ss_pred EeeeccccccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHh
Q 003855 643 VSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKES 721 (791)
Q Consensus 643 l~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~ 721 (791)
|+|||+++..... .....++..|+|||...+ ..++.++|||||||++|||++|+.||..... ...+.......
T Consensus 161 l~dfg~~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslG~il~el~~g~~pf~~~~~-~~~~~~~~~~~ 234 (345)
T cd07877 161 ILDFGLARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDH-IDQLKLILRLV 234 (345)
T ss_pred Eeccccccccccc-----ccccccCCCccCHHHHhCccCCCchhhHHHHHHHHHHHHhCCCCCCCCCH-HHHHHHHHHHh
Confidence 9999999764321 122357889999998765 5688899999999999999999999865321 11111111111
Q ss_pred c--CCChhhhcchhhhhhH----Hh-----h-HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 722 L--PHGLTEVVDANLVREE----QA-----F-SAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 722 ~--~~~~~~~~d~~~~~~~----~~-----~-~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
. +......+........ .. . .....++.++.+++.+|++.||++||++.++++.
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dp~~R~t~~e~l~h 300 (345)
T cd07877 235 GTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRITAAQALAH 300 (345)
T ss_pred CCCCHHHHhhcccHhHHHHHHHhcccCCcchhhhcCCCCHHHHHHHHHHcCCChhhcCCHHHHhcC
Confidence 0 0001000000000000 00 0 0001235668899999999999999999998764
No 370
>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and
Probab=100.00 E-value=5.4e-33 Score=297.53 Aligned_cols=272 Identities=26% Similarity=0.299 Sum_probs=205.1
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCC-----eee
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPD-----FKA 573 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-----~~~ 573 (791)
+|++.+.||+|+||.||+|+.. +++.||+|++.... ....+.+.+|+.++++++||||+++.+++.... ..+
T Consensus 1 ~y~i~~~ig~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~~~~~~~~~~ 80 (330)
T cd07834 1 RYELLKPIGSGAYGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPPSPEDFNDVY 80 (330)
T ss_pred CceeeeeecCCCCeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhcccCcccccceE
Confidence 4788899999999999999975 58999999887543 344567889999999999999999999987765 789
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
+||||++ ++|.+++.... .+++..+..++.+++.||+||| +.+|+||||||+||+++.++.++|+|||++....
T Consensus 81 lv~e~~~-~~l~~~l~~~~-~l~~~~~~~i~~~l~~~l~~LH----~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~ 154 (330)
T cd07834 81 IVTELME-TDLHKVIKSPQ-PLTDDHIQYFLYQILRGLKYLH----SANVIHRDLKPSNILVNSNCDLKICDFGLARGVD 154 (330)
T ss_pred EEecchh-hhHHHHHhCCC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEcccCceEeec
Confidence 9999997 58999887654 5899999999999999999999 6789999999999999999999999999998765
Q ss_pred CCCCc-ceeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhh--
Q 003855 654 EGEDS-VTQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEV-- 729 (791)
Q Consensus 654 ~~~~~-~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-- 729 (791)
..... .......++..|+|||.+.+. .++.++||||||+++|+|++|+.||...... .....+.........+.
T Consensus 155 ~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~--~~~~~i~~~~~~~~~~~~~ 232 (330)
T cd07834 155 PDEDEKGFLTEYVVTRWYRAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYI--DQLNLIVEVLGTPSEEDLK 232 (330)
T ss_pred ccccccccccccccccCcCCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHH--HHHHHHHHhcCCCChhHhh
Confidence 43211 112234578899999998877 8999999999999999999999999764321 11111111111000000
Q ss_pred -cchhhhhhH----------HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHH
Q 003855 730 -VDANLVREE----------QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK--LKKIKV 781 (791)
Q Consensus 730 -~d~~~~~~~----------~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~--L~~~~~ 781 (791)
......... .........+..+.+++.+||+.+|++||++.++++. +++++.
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~Rpt~~~ll~~~~~~~~~~ 297 (330)
T cd07834 233 FITSEKARNYLKSLPKKPKKPLSKLFPGASPEAIDLLEKMLVFDPKKRITADEALAHPYLAQLHD 297 (330)
T ss_pred hccccchhhHHhhcccCCcchhHHhcccCCHHHHHHHHHHccCChhhCCCHHHHHhCccHHhhcc
Confidence 000000000 0000011245678899999999999999999999984 665543
No 371
>KOG1006 consensus Mitogen-activated protein kinase (MAPK) kinase MKK4 [Signal transduction mechanisms]
Probab=100.00 E-value=3e-35 Score=276.11 Aligned_cols=253 Identities=25% Similarity=0.285 Sum_probs=193.3
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-hHHHHHHHHHHHHHH-hccCCccceeeeeeccCCeeeEEEecC
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-ERAFRSFDSECEVLR-NVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-~~~~~~~~~e~~~l~-~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.+....||.|+||+|+|-.++ .|+..|||++.... +...+++..|.+... .-++||||+++|++..++..|+.||.|
T Consensus 66 Lqdlg~iG~G~fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~F~EGdcWiCMELM 145 (361)
T KOG1006|consen 66 LQDLGEIGNGAFGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGALFSEGDCWICMELM 145 (361)
T ss_pred HHHHHHhcCCcchhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhhhcCCceeeeHHHH
Confidence 344568999999999999875 79999999997654 344556666776554 447999999999999999999999999
Q ss_pred CCCCHHHHHh----hCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCC
Q 003855 580 PNGSLEKWLY----SHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEG 655 (791)
Q Consensus 580 ~~g~L~~~l~----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~ 655 (791)
. .|+..+-. .....+++.-.-.|......||.||.+ ...|+|||+||+|||++..|.+|+||||.+..+.
T Consensus 146 d-~SlDklYk~vy~vq~~~ipE~Ilg~ItvatV~AL~yLK~---~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv-- 219 (361)
T KOG1006|consen 146 D-ISLDKLYKRVYSVQKSRIPENILGHITVATVDALDYLKE---ELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLV-- 219 (361)
T ss_pred h-hhHHHHHHHHHHHHhccCcHhhhhheeeeehhHHHHHHH---HhhhhhccCChhheEEecCCCEeeecccchHhHH--
Confidence 4 36654332 223447888888899999999999986 4579999999999999999999999999997653
Q ss_pred CCcceeecccccccccCCCccCC--CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 656 EDSVTQTMTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 656 ~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
.+...+..+|-..|||||.+.. ..|+-++||||+|++++|+.||..||.....--..+.+.+..+.+.-..+
T Consensus 220 -~SiAkT~daGCrpYmAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~svfeql~~Vv~gdpp~l~~~----- 293 (361)
T KOG1006|consen 220 -DSIAKTVDAGCRPYMAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDSVFEQLCQVVIGDPPILLFD----- 293 (361)
T ss_pred -HHHHhhhccCCccccChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHHHHHHHHHHHcCCCCeecCc-----
Confidence 3445556678889999997754 34899999999999999999999999764332222333333222221111
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
....+++..+..++..|+.+|-.+||.+.+++++
T Consensus 294 --------~~~~~~s~~~~~fintCl~Kd~~~Rpky~~Lk~~ 327 (361)
T KOG1006|consen 294 --------KECVHYSFSMVRFINTCLIKDRSDRPKYDDLKKF 327 (361)
T ss_pred --------ccccccCHHHHHHHHHHhhcccccCcchhhhhcC
Confidence 1122456778899999999999999999998764
No 372
>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6. Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi
Probab=100.00 E-value=2.8e-33 Score=300.58 Aligned_cols=266 Identities=20% Similarity=0.260 Sum_probs=195.6
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccC----------
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNP---------- 569 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~---------- 569 (791)
.+|+..+.||+|+||.||+|... +++.||+|.+........+.+.+|++++++++||||+++++++...
T Consensus 5 ~~y~~~~~Lg~g~~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~ 84 (342)
T cd07854 5 SRYMDLRPLGCGSNGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGS 84 (342)
T ss_pred cceEEEEEecCCCCEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhccccccccccccc
Confidence 67899999999999999999864 6899999998766556667788999999999999999999876543
Q ss_pred ----CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC-CCCcEEEe
Q 003855 570 ----DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD-ENMAAHVS 644 (791)
Q Consensus 570 ----~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~-~~~~~kl~ 644 (791)
...++||||++ ++|.+++... .+++..+..++.||+.||.||| ..+++||||||+||+++ +++.+|++
T Consensus 85 ~~~~~~~~lv~e~~~-~~L~~~~~~~--~l~~~~~~~~~~qi~~aL~~LH----~~givH~dikp~Nili~~~~~~~kl~ 157 (342)
T cd07854 85 LTELNSVYIVQEYME-TDLANVLEQG--PLSEEHARLFMYQLLRGLKYIH----SANVLHRDLKPANVFINTEDLVLKIG 157 (342)
T ss_pred ccccceEEEEeeccc-ccHHHHHHcC--CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHEEEcCCCceEEEC
Confidence 35789999996 5999888654 3789999999999999999999 67899999999999998 55678999
Q ss_pred eeccccccCCCCCcc-eeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhc
Q 003855 645 DFGISKLLGEGEDSV-TQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESL 722 (791)
Q Consensus 645 Dfgla~~~~~~~~~~-~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~ 722 (791)
|||+++......... ......++..|+|||.+.. ..++.++|||||||++|||++|+.||....+.+ ..........
T Consensus 158 dfg~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~-~~~~~~~~~~ 236 (342)
T cd07854 158 DFGLARIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELE-QMQLILESVP 236 (342)
T ss_pred CcccceecCCccccccccccccccccccCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHH-HHHHHHHhcC
Confidence 999998654322111 1122357889999997543 568889999999999999999999997532211 1111111100
Q ss_pred CCC------hhhhcchhhhh--hHH---hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 723 PHG------LTEVVDANLVR--EEQ---AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 723 ~~~------~~~~~d~~~~~--~~~---~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
... ........... ... ........+.++.+++.+|++.||++|||+.|+++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~L~~dP~~R~t~~ell~ 299 (342)
T cd07854 237 VVREEDRNELLNVIPSFVRNDGGEPRRPLRDLLPGVNPEALDFLEQILTFNPMDRLTAEEALM 299 (342)
T ss_pred CCChHHhhhhhhhhhhhhhhcccccCCCHHHHccCCCHHHHHHHHHHhCCCchhccCHHHHhC
Confidence 000 00000000000 000 00001124567889999999999999999999984
No 373
>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1. Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph
Probab=100.00 E-value=8.2e-33 Score=290.41 Aligned_cols=251 Identities=25% Similarity=0.289 Sum_probs=195.3
Q ss_pred ccccccccCCCcceEEEEEEe----cCCcEEEEEEeehhh----hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCee
Q 003855 502 EFNECNLLGTGSFGSVYKGTI----SDGTDVAIKIFNLQL----ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFK 572 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~----~~~~~vavK~~~~~~----~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~ 572 (791)
+|++.+.||+|+||.||.|+. .+|+.||+|++.... ....+.+..|+.+++++ +||||+++++++......
T Consensus 1 ~y~~~~~lg~G~~g~v~~~~~~~~~~~g~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~~~~~~~ 80 (290)
T cd05613 1 NFELLKVLGTGAYGKVFLVRKVSGHDSGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTDTKL 80 (290)
T ss_pred CceeeeeeccCCcceEEEEEeccCCCCCceEEEEEeehhhhhhcchHHHHHHHHHHHHHhcccCCChhceeeEeecCCeE
Confidence 477889999999999999985 368999999987542 22346678899999999 599999999999988899
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++||||+++++|.+++.... .+++..+..++.|++.||.||| +.+++||||+|+||++++++.+||+|||+++..
T Consensus 81 ~lv~e~~~~~~L~~~l~~~~-~l~~~~~~~~~~qi~~al~~lH----~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~ 155 (290)
T cd05613 81 HLILDYINGGELFTHLSQRE-RFKEQEVQIYSGEIVLALEHLH----KLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 155 (290)
T ss_pred EEEEecCCCCcHHHHHHHcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeEECCCCCEEEeeCccceec
Confidence 99999999999999998654 4788899999999999999999 678999999999999999999999999999875
Q ss_pred CCCCCcceeecccccccccCCCccCC--CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 653 GEGEDSVTQTMTMATIGYMAPEYGSE--GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 653 ~~~~~~~~~~~~~g~~~y~aPE~~~~--~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
...... ......|+..|+|||.... ..++.++||||||+++|+|++|+.||..... ......+........
T Consensus 156 ~~~~~~-~~~~~~~~~~y~aPE~~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~-~~~~~~~~~~~~~~~----- 228 (290)
T cd05613 156 HEDEVE-RAYSFCGTIEYMAPDIVRGGDGGHDKAVDWWSMGVLMYELLTGASPFTVDGE-KNSQAEISRRILKSE----- 228 (290)
T ss_pred cccccc-ccccccCCcccCChhhccCCCCCCCccccHHHHHHHHHHHhcCCCCCCcCCc-cccHHHHHHHhhccC-----
Confidence 433221 1223457889999998765 3467899999999999999999999864211 111112111111000
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCC-----CHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRI-----NVTDAAA 774 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP-----t~~ev~~ 774 (791)
.+.+..++..+.+++.+|++.+|++|| ++.++++
T Consensus 229 ----------~~~~~~~~~~~~~ll~~~l~~~p~~R~~~~~~~~~~l~~ 267 (290)
T cd05613 229 ----------PPYPQEMSALAKDIIQRLLMKDPKKRLGCGPSDADEIKK 267 (290)
T ss_pred ----------CCCCccCCHHHHHHHHHHhcCCHHHhcCCCCCCHHHHHc
Confidence 001112445678999999999999997 6666654
No 374
>KOG0586 consensus Serine/threonine protein kinase [General function prediction only]
Probab=100.00 E-value=1.7e-33 Score=295.56 Aligned_cols=249 Identities=27% Similarity=0.365 Sum_probs=203.0
Q ss_pred HHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeE
Q 003855 498 RATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 498 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~l 574 (791)
.....|.+...||+|.|+.|..|+.. ++..||+|++++.. ....+.+.+|+++|..++|||||+++.+...+..+|+
T Consensus 53 ~~vg~y~i~~tig~g~f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~~t~~~lyl 132 (596)
T KOG0586|consen 53 NSVGLYVIIKTIGKGNFAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVIETEATLYL 132 (596)
T ss_pred ccccceeeeeeeccceeEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeeeeecceeEE
Confidence 34567899999999999999999865 79999999997654 2233458889999999999999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||+.+|.+.+|+.+++.- .......+..|+.+|++||| .+.|||||||++|||++.+.++||+|||++..+..
T Consensus 133 V~eya~~ge~~~yl~~~gr~-~e~~ar~~F~q~vsaveYcH----~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~ 207 (596)
T KOG0586|consen 133 VMEYASGGELFDYLVKHGRM-KEKEARAKFRQIVSAVEYCH----SKNIVHRDLKAENILLDENMNIKIADFGFSTFFDY 207 (596)
T ss_pred EEEeccCchhHHHHHhcccc-hhhhhhhhhHHHHHHHHHHh----hcceeccccchhhcccccccceeeeccccceeecc
Confidence 99999999999999988764 44788889999999999999 77899999999999999999999999999998864
Q ss_pred CCCcceeecccccccccCCCccCCCC-CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGI-VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~-~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
.. .....+|++.|.|||+..+.. .++.+|+||+|+++|-|+.|..||++..-.+.. ++
T Consensus 208 ~~---~lqt~cgsppyAaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~Lr------------------~r 266 (596)
T KOG0586|consen 208 GL---MLQTFCGSPPYAAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKELR------------------PR 266 (596)
T ss_pred cc---cccccCCCCCccChHhhcCcccCCcceehhhhhhhheeeeecccccCCccccccc------------------ch
Confidence 33 334467999999999887765 467899999999999999999999974322211 11
Q ss_pred hhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 734 LVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
......+.+..+ ..+..+++++++-.+|.+|++..++.+
T Consensus 267 vl~gk~rIp~~m--s~dce~lLrk~lvl~Pskr~~~dqim~ 305 (596)
T KOG0586|consen 267 VLRGKYRIPFYM--SCDCEDLLRKFLVLNPSKRGPCDQIMK 305 (596)
T ss_pred heeeeeccccee--echhHHHHHHhhccCccccCCHHHhhh
Confidence 111111111111 123448999999999999999999875
No 375
>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12
Probab=100.00 E-value=1.3e-32 Score=295.41 Aligned_cols=266 Identities=23% Similarity=0.260 Sum_probs=197.6
Q ss_pred HHHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCC--
Q 003855 496 IQRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPD-- 570 (791)
Q Consensus 496 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~-- 570 (791)
+....++|++.+.||+|+||.||+|... +++.||||++.... ....+.+..|+.++++++||||+++++++....
T Consensus 10 ~~~~~~~y~~~~~lg~G~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~ 89 (343)
T cd07880 10 IWEVPDRYRDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVIGLLDVFTPDLSL 89 (343)
T ss_pred hhccccceEEEEEeeecCCeEEEEEEECCCCcEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCccceeeeecCCccc
Confidence 3445688999999999999999999854 78999999885432 233456788999999999999999999886543
Q ss_pred ----eeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeee
Q 003855 571 ----FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDF 646 (791)
Q Consensus 571 ----~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Df 646 (791)
..++||||+ +++|.+++... .+++..+..++.|+++|+.||| ..+|+||||||+||+++.++.++++||
T Consensus 90 ~~~~~~~lv~e~~-~~~l~~~~~~~--~l~~~~~~~i~~qi~~al~~LH----~~gi~H~dlkp~Nill~~~~~~kl~df 162 (343)
T cd07880 90 DRFHDFYLVMPFM-GTDLGKLMKHE--KLSEDRIQFLVYQMLKGLKYIH----AAGIIHRDLKPGNLAVNEDCELKILDF 162 (343)
T ss_pred cccceEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeec
Confidence 358999999 77999888753 3899999999999999999999 678999999999999999999999999
Q ss_pred ccccccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcC--
Q 003855 647 GISKLLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLP-- 723 (791)
Q Consensus 647 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~-- 723 (791)
|++....... ....++..|+|||.+.+ ..++.++||||+||++|++++|+.||...... ..+.........
T Consensus 163 g~~~~~~~~~-----~~~~~~~~y~aPE~~~~~~~~~~~~Di~slG~ll~~l~~g~~pf~~~~~~-~~~~~~~~~~~~~~ 236 (343)
T cd07880 163 GLARQTDSEM-----TGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIMAEMLTGKPLFKGHDHL-DQLMEIMKVTGTPS 236 (343)
T ss_pred ccccccccCc-----cccccCCcccCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCC
Confidence 9998653321 22356889999998765 45889999999999999999999999753211 111111110000
Q ss_pred CChhhhcchh-hhhhH---------HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 724 HGLTEVVDAN-LVREE---------QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 724 ~~~~~~~d~~-~~~~~---------~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
....+.+... ..... ........++..+.+++.+|++.||++|||+.++++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~t~~~~l~ 297 (343)
T cd07880 237 KEFVQKLQSEDAKNYVKKLPRFRKKDFRSLLPNANPLAVNVLEKMLVLDAESRITAAEALA 297 (343)
T ss_pred HHHHHhhcchhHHHHHHhccccCcchHHHhccCCChHHHHHHHHHcCCChhhCCCHHHHhc
Confidence 0000000000 00000 000011234567889999999999999999999983
No 376
>PTZ00024 cyclin-dependent protein kinase; Provisional
Probab=100.00 E-value=1e-32 Score=295.94 Aligned_cols=264 Identities=22% Similarity=0.272 Sum_probs=195.0
Q ss_pred hcccc-ccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHH--------------HHHHHHHHHHHHhccCCccceeee
Q 003855 501 DEFNE-CNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERA--------------FRSFDSECEVLRNVRHRNLIKILS 564 (791)
Q Consensus 501 ~~~~~-~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~--------------~~~~~~e~~~l~~l~h~niv~l~~ 564 (791)
++|.. .+.||+|+||+||+|... +++.||||++....... ...+.+|++++++++||||+++++
T Consensus 8 ~ry~~~~~~ig~G~~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~ 87 (335)
T PTZ00024 8 ERYIQKGAHLGEGTYGKVEKAYDTLTGKIVAIKKVKIIEISNDVTKDRQLVGMCGIHFTTLRELKIMNEIKHENIMGLVD 87 (335)
T ss_pred cchhhhhhcccCCCceeEEEEEECCCCCeEEEEEeeccccccccccchhhhcccccchhHHHHHHHHHhCCCcceeeeeE
Confidence 45654 467999999999999865 78999999886432111 124678999999999999999999
Q ss_pred eeccCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEe
Q 003855 565 SCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVS 644 (791)
Q Consensus 565 ~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~ 644 (791)
++...+..++||||++ |+|.+++.... .+++.....++.|++.||.||| +.+++||||+|+||+++.++.++++
T Consensus 88 ~~~~~~~~~lv~e~~~-~~l~~~l~~~~-~~~~~~~~~~~~ql~~aL~~LH----~~~i~H~dl~~~nill~~~~~~kl~ 161 (335)
T PTZ00024 88 VYVEGDFINLVMDIMA-SDLKKVVDRKI-RLTESQVKCILLQILNGLNVLH----KWYFMHRDLSPANIFINSKGICKIA 161 (335)
T ss_pred EEecCCcEEEEEeccc-cCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCeecccccHHHeEECCCCCEEEC
Confidence 9999999999999996 69999987544 3889999999999999999999 6789999999999999999999999
Q ss_pred eeccccccCCCC------------CcceeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCc
Q 003855 645 DFGISKLLGEGE------------DSVTQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE 711 (791)
Q Consensus 645 Dfgla~~~~~~~------------~~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~ 711 (791)
|||+++...... .........++..|+|||++.+. .++.++||||+||++|||++|+.||......+
T Consensus 162 dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slG~~l~el~tg~~p~~~~~~~~ 241 (335)
T PTZ00024 162 DFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWYRAPELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEID 241 (335)
T ss_pred CccceeecccccccccccccccccccccccccccccCCCCChhcccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHH
Confidence 999998664111 01111223467889999988654 47899999999999999999999987532211
Q ss_pred chHHHHHHHhcCCC----hhhhc--------chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 712 MSLRRWVKESLPHG----LTEVV--------DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 712 ~~~~~~~~~~~~~~----~~~~~--------d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.+.. +....... +.... ....... .......++.++.+++.+|++.+|++||++.|++.
T Consensus 242 -~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~li~~~l~~~P~~R~s~~~~l~ 312 (335)
T PTZ00024 242 -QLGR-IFELLGTPNEDNWPQAKKLPLYTEFTPRKPKD--LKTIFPNASDDAIDLLQSLLKLNPLERISAKEALK 312 (335)
T ss_pred -HHHH-HHHHhCCCchhhCcchhhcccccccCcCCccc--HHHhCcCCChHHHHHHHHHcCCCchhccCHHHHhc
Confidence 1111 11111000 00000 0000000 00011134567889999999999999999999985
No 377
>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the
Probab=100.00 E-value=1.2e-32 Score=288.17 Aligned_cols=262 Identities=26% Similarity=0.294 Sum_probs=198.8
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
|+..+.||+|+||.||+|+.. +++.||+|++.... ....+.+..|+.++++++|||++++++++.+.+..++||||+
T Consensus 1 y~~~~~ig~g~~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~~~~~~~~v~e~~ 80 (282)
T cd07829 1 YEKLEKLGEGTYGVVYKARDKKTGEIVALKKIRLDNEEEGIPSTALREISLLKELKHPNIVKLLDVIHTERKLYLVFEYC 80 (282)
T ss_pred CeeehcccccCcceEEEeeecCCCcEEEEEEeccccccccccHHHHHHHHHHHhcCCCCHHHHHhhhhcCCceEEEecCc
Confidence 556788999999999999975 58999999987653 333466788999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
+ ++|.+++......+++..+..++.+++.||.||| ..+|+||||+|+||++++++.++|+|||.++.......
T Consensus 81 ~-~~l~~~i~~~~~~~~~~~~~~~~~~i~~~l~~LH----~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~-- 153 (282)
T cd07829 81 D-MDLKKYLDKRPGPLSPNLIKSIMYQLLRGLAYCH----SHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLR-- 153 (282)
T ss_pred C-cCHHHHHHhhccCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCChheEEEcCCCCEEEecCCcccccCCCcc--
Confidence 7 5999999876456899999999999999999999 67899999999999999999999999999987643321
Q ss_pred eeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC----hhhh-----
Q 003855 660 TQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG----LTEV----- 729 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~----~~~~----- 729 (791)
......++..|+|||.+.+. .++.++|||||||++||+++|+.||...... ..+.+ +....... ....
T Consensus 154 ~~~~~~~~~~~~aPE~~~~~~~~~~~~Dv~slG~~l~~l~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 231 (282)
T cd07829 154 TYTHEVVTLWYRAPEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEI-DQLFK-IFQILGTPTEESWPGVTKLPD 231 (282)
T ss_pred ccCccccCcCcCChHHhcCCcCCCccccHHHHHHHHHHHHhCCCCCCCccHH-HHHHH-HHHHhCCCcHHHHHhhccccc
Confidence 12223457789999988766 8899999999999999999999998653211 11111 11100000 0000
Q ss_pred cchhhh---hhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 730 VDANLV---REEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 730 ~d~~~~---~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.+.... .... .......+..+.+++.+|++.+|++||++.+++.
T Consensus 232 ~~~~~~~~~~~~~-~~~~~~~~~~~~~~i~~~l~~~P~~Rp~~~~~l~ 278 (282)
T cd07829 232 YKPTFPKFPPKDL-EKVLPRLDPEGIDLLSKMLQYNPAKRISAKEALK 278 (282)
T ss_pred ccccccccCccch-HHhcccccHHHHHHHHHhhccCcccCCCHHHHhh
Confidence 000000 0000 0001122567899999999999999999999975
No 378
>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK
Probab=100.00 E-value=5.8e-33 Score=298.33 Aligned_cols=263 Identities=24% Similarity=0.298 Sum_probs=197.4
Q ss_pred HHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCe---
Q 003855 498 RATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDF--- 571 (791)
Q Consensus 498 ~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~--- 571 (791)
...++|+..+.||+|+||.||+|+.. +++.||||++.... ....+.+.+|+.++++++|||++++.+++...+.
T Consensus 12 ~~~~~y~~~~~ig~g~~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~ 91 (343)
T cd07851 12 EVPDRYQNLSPVGSGAYGQVCSAFDTKTGRKVAIKKLSRPFQSAIHAKRTYRELRLLKHMDHENVIGLLDVFTPASSLED 91 (343)
T ss_pred cccCceEEEEEeccCCceEEEEEEECCCCcEEEEEecccccchhhHHHHHHHHHHHHHhccCCCHHHHHHHhhccccccc
Confidence 34678999999999999999999975 68899999886432 2334567789999999999999999998865554
Q ss_pred ---eeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecc
Q 003855 572 ---KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGI 648 (791)
Q Consensus 572 ---~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgl 648 (791)
.++|+||+ +++|.+++... .+++..+..++.|+++|+.||| +.+|+||||+|+||++++++.++|+|||+
T Consensus 92 ~~~~~lv~e~~-~~~L~~~~~~~--~l~~~~~~~~~~ql~~aL~~LH----~~gi~H~dlkp~Nill~~~~~~kL~dfg~ 164 (343)
T cd07851 92 FQDVYLVTHLM-GADLNNIVKCQ--KLSDDHIQFLVYQILRGLKYIH----SAGIIHRDLKPSNIAVNEDCELKILDFGL 164 (343)
T ss_pred cccEEEEEecC-CCCHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCCHHHeEECCCCCEEEccccc
Confidence 89999999 67999998764 3899999999999999999999 67899999999999999999999999999
Q ss_pred ccccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCCh-
Q 003855 649 SKLLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGL- 726 (791)
Q Consensus 649 a~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~- 726 (791)
+...... .....++..|+|||...+ ..++.++|||||||++||+++|+.||...... ..+..... ......
T Consensus 165 ~~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~DvwslGv~l~elltg~~pf~~~~~~-~~~~~i~~-~~~~~~~ 237 (343)
T cd07851 165 ARHTDDE-----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHI-DQLKRIMN-LVGTPDE 237 (343)
T ss_pred ccccccc-----ccCCcccccccCHHHHhCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCChH-HHHHHHHH-hcCCCCH
Confidence 9865432 122357888999998754 46789999999999999999999999653211 11111111 111000
Q ss_pred -----------hhhcchhhhhhHHhh-HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 727 -----------TEVVDANLVREEQAF-SAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 727 -----------~~~~d~~~~~~~~~~-~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...+........... .....++.++.+++.+|++.+|++|||+.|+++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~l~dli~~~l~~~P~~Rpt~~ell~ 297 (343)
T cd07851 238 ELLQKISSESARNYIQSLPQMPKKDFKEVFSGANPLAIDLLEKMLVLDPDKRITAAEALA 297 (343)
T ss_pred HHHhhccchhHHHHHHhccccCCCCHHHHhccCCHHHHHHHHHhCCCChhhCCCHHHHhc
Confidence 000000000000000 001123577899999999999999999999875
No 379
>KOG0662 consensus Cyclin-dependent kinase CDK5 [Intracellular trafficking, secretion, and vesicular transport; Signal transduction mechanisms]
Probab=100.00 E-value=4.5e-33 Score=246.13 Aligned_cols=266 Identities=23% Similarity=0.291 Sum_probs=198.7
Q ss_pred hccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 501 DEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
.+|...++||+|+||+||+|+. ++++.||+|.+.-.. +.......+|+.+++.++|.|||++++....+...-+|+|
T Consensus 2 ~~ydkmekigegtygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvlhsdkkltlvfe 81 (292)
T KOG0662|consen 2 QKYDKMEKIGEGTYGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFE 81 (292)
T ss_pred cchHHHHhhcCCcceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhhccCceeEEeHH
Confidence 3566778999999999999995 478899999886543 4445677899999999999999999999988889999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
||.. +|..|..+-...++......++.|+.+|+.++| ++.+.|||+||.|.+++.+|+.|++|||+|+-++-.
T Consensus 82 ~cdq-dlkkyfdslng~~d~~~~rsfmlqllrgl~fch----shnvlhrdlkpqnllin~ngelkladfglarafgip-- 154 (292)
T KOG0662|consen 82 FCDQ-DLKKYFDSLNGDLDPEIVRSFMLQLLRGLGFCH----SHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIP-- 154 (292)
T ss_pred HhhH-HHHHHHHhcCCcCCHHHHHHHHHHHHhhhhhhh----hhhhhhccCCcceEEeccCCcEEecccchhhhcCCc--
Confidence 9954 999999887777999999999999999999999 778999999999999999999999999999976532
Q ss_pred cceeecccccccccCCCccCCC-CCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHh--cCC-C---hhhh
Q 003855 658 SVTQTMTMATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKES--LPH-G---LTEV 729 (791)
Q Consensus 658 ~~~~~~~~g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~--~~~-~---~~~~ 729 (791)
....+..+.|.+|++|.++.+. -|+...|+||.||++.|+.. |++-|.+... ...+.+.++.. ..+ . +...
T Consensus 155 vrcysaevvtlwyrppdvlfgakly~tsidmwsagcifaelanagrplfpg~dv-ddqlkrif~~lg~p~ed~wps~t~l 233 (292)
T KOG0662|consen 155 VRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDV-DDQLKRIFRLLGTPTEDQWPSMTKL 233 (292)
T ss_pred eEeeeceeeeeeccCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcH-HHHHHHHHHHhCCCccccCCccccC
Confidence 3345566789999999988764 58999999999999999998 4444554221 22222222211 111 1 1111
Q ss_pred cchhhhhhHHhhHHHHHHHH----HHHHHHhhccccCCCCCCCHHHHHH
Q 003855 730 VDANLVREEQAFSAKMDCIL----SIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 730 ~d~~~~~~~~~~~~~~~~~~----~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
-|............+.++.+ .=.+++...+.-+|..|.++.++++
T Consensus 234 pdyk~yp~ypattswsqivp~lns~grdllqkll~cnp~qrisaeaalq 282 (292)
T KOG0662|consen 234 PDYKPYPIYPATTSWSQIVPKLNSTGRDLLQKLLKCNPAQRISAEAALQ 282 (292)
T ss_pred CCCcccCCccccchHHHHhhhhcchhHHHHHHHhccCcccccCHHHHhc
Confidence 11111111111111111111 1246777788889999999998875
No 380
>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13
Probab=100.00 E-value=1.8e-32 Score=294.28 Aligned_cols=269 Identities=22% Similarity=0.262 Sum_probs=196.2
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccC------
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP------ 569 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~------ 569 (791)
..++|...+.||+|+||.||+|+.. +|+.||||++.... ......+.+|+.++++++||||+++++++...
T Consensus 13 ~~~~y~~~~~ig~g~~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~niv~~~~~~~~~~~~~~~ 92 (342)
T cd07879 13 LPERYTSLKQVGSGAYGSVCSAIDKRTGEKVAIKKLSRPFQSEIFAKRAYRELTLLKHMQHENVIGLLDVFTSAVSGDEF 92 (342)
T ss_pred cccceEEEEEeeecCCeEEEEEEeCCCCcEEEEEEecCccccccchhHHHHHHHHHHhcCCCCccchhheecccccCCCC
Confidence 3578999999999999999999864 78999999886432 22345678899999999999999999988644
Q ss_pred CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccc
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGIS 649 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla 649 (791)
...++|+||+. +++.++.. ..+++..+..++.|++.||+||| ..+++||||||+||+++.++.+|++|||++
T Consensus 93 ~~~~lv~e~~~-~~l~~~~~---~~~~~~~~~~~~~qi~~aL~~LH----~~~i~H~dlkp~NIll~~~~~~kL~dfg~~ 164 (342)
T cd07879 93 QDFYLVMPYMQ-TDLQKIMG---HPLSEDKVQYLVYQMLCGLKYIH----SAGIIHRDLKPGNLAVNEDCELKILDFGLA 164 (342)
T ss_pred ceEEEEecccc-cCHHHHHc---CCCCHHHHHHHHHHHHHHHHHHH----HCCcccCCCCHHHEEECCCCCEEEeeCCCC
Confidence 34689999996 47777653 24789999999999999999999 678999999999999999999999999999
Q ss_pred cccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCC--Ch
Q 003855 650 KLLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPH--GL 726 (791)
Q Consensus 650 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~--~~ 726 (791)
+..... .....++..|+|||.+.+ ..++.++|||||||++|||++|+.||...... ..+...+...... ..
T Consensus 165 ~~~~~~-----~~~~~~~~~y~aPE~~~~~~~~~~~~Dv~slGvil~el~~g~~pf~~~~~~-~~~~~~~~~~~~~~~~~ 238 (342)
T cd07879 165 RHADAE-----MTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYL-DQLTQILKVTGVPGPEF 238 (342)
T ss_pred cCCCCC-----CCCceeeecccChhhhcCccccCchHHHHHHHHHHHHHHhCCCCCCCCCHH-HHHHHHHHhcCCCCHHH
Confidence 764321 122356888999998766 46889999999999999999999999753211 1111111100000 00
Q ss_pred hhhcch-hhhh---------hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH--HHHHHH
Q 003855 727 TEVVDA-NLVR---------EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK--LKKIKV 781 (791)
Q Consensus 727 ~~~~d~-~~~~---------~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~--L~~~~~ 781 (791)
.+..+. .... ...........+.++.+++.+||+.||++||++.|+++. ++.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dP~~R~~~~e~l~h~~f~~~~~ 305 (342)
T cd07879 239 VQKLEDKAAKSYIKSLPKYPRKDFSTLFPKASPQAVDLLEKMLELDVDKRLTATEALEHPYFDSFRD 305 (342)
T ss_pred HHHhcccchHHHHhhcCCcccchHHHHhcCCCHHHHHHHHHHcCCChhhCcCHHHHhcCcchhhccc
Confidence 000000 0000 000000011234668899999999999999999999844 666543
No 381
>KOG0671 consensus LAMMER dual specificity kinases [Signal transduction mechanisms]
Probab=100.00 E-value=2.5e-33 Score=277.29 Aligned_cols=263 Identities=23% Similarity=0.273 Sum_probs=200.7
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhcc-C-C----ccceeeeeeccCCee
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVR-H-R----NLIKILSSCSNPDFK 572 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h-~----niv~l~~~~~~~~~~ 572 (791)
+.+|.+...+|+|+||.|-++... .+..||||+++.- ....++..-|+++++++. + | -+|++.+|+.-.++.
T Consensus 88 ~~Ry~i~~~lGeGtFGkV~ec~D~~~~~~vAlKIik~V-~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wFdyrghi 166 (415)
T KOG0671|consen 88 TNRYEIVDLLGEGTFGKVVECWDRETKEHVALKIIKNV-DKYREAALIEIEVLQKINESDPNGKFRCVQMRDWFDYRGHI 166 (415)
T ss_pred ccceehhhhhcCCcccceEEEeecCCCceehHHHHHHH-HHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhhhccCce
Confidence 678999999999999999999764 5789999988643 444566777999999993 3 3 378888999999999
Q ss_pred eEEEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC--------------
Q 003855 573 ALVLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE-------------- 637 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~-------------- 637 (791)
++|+|.+ |-|+.+++.++. .+++...+..|+.|++++++||| +.+++|-||||+||++.+
T Consensus 167 Civfell-G~S~~dFlk~N~y~~fpi~~ir~m~~QL~~sv~fLh----~~kl~HTDLKPENILfvss~~~~~~~~k~~~~ 241 (415)
T KOG0671|consen 167 CIVFELL-GLSTFDFLKENNYIPFPIDHIRHMGYQLLESVAFLH----DLKLTHTDLKPENILFVSSEYFKTYNPKKKVC 241 (415)
T ss_pred EEEEecc-ChhHHHHhccCCccccchHHHHHHHHHHHHHHHHHH----hcceeecCCChheEEEeccceEEEeccCCccc
Confidence 9999988 679999999754 46899999999999999999999 788999999999999942
Q ss_pred ------CCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCc
Q 003855 638 ------NMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGE 711 (791)
Q Consensus 638 ------~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~ 711 (791)
+..+|++|||.|+.-.+.. +..+.|..|+|||++.+-.++.++||||+|||++|+.||..-|....+.|
T Consensus 242 ~~r~~ks~~I~vIDFGsAtf~~e~h-----s~iVsTRHYRAPEViLgLGwS~pCDvWSiGCIL~ElytG~~LFqtHen~E 316 (415)
T KOG0671|consen 242 FIRPLKSTAIKVIDFGSATFDHEHH-----STIVSTRHYRAPEVILGLGWSQPCDVWSIGCILVELYTGETLFQTHENLE 316 (415)
T ss_pred eeccCCCcceEEEecCCcceeccCc-----ceeeeccccCCchheeccCcCCccCceeeeeEEEEeeccceecccCCcHH
Confidence 3458999999998754332 44578999999999999999999999999999999999998887654333
Q ss_pred c-hHHHHHHHhcCCCh--------------------------hhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCC
Q 003855 712 M-SLRRWVKESLPHGL--------------------------TEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPD 764 (791)
Q Consensus 712 ~-~~~~~~~~~~~~~~--------------------------~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~ 764 (791)
. .+.+-+-...+..+ ..+.+. ................++++++.+|+..||.
T Consensus 317 HLaMMerIlGp~P~~mi~r~~~~Kyf~~~rldw~e~~~~~~~k~v~~~-ckpl~~~~~~~d~e~~~LfDLl~~mL~fDP~ 395 (415)
T KOG0671|consen 317 HLAMMERILGPIPSRMIKKTRKEKYFRRGRLDWPEVSSKGKSKYVFEP-CKPLKKYMLQDDLEHVQLFDLLRRMLEFDPA 395 (415)
T ss_pred HHHHHHHhhCCCcHHHhhhhhhHhhhhcccccCccccccccchhhhcC-CccHHHHhccCcHHHhHHHHHHHHHHccCcc
Confidence 1 11111111111110 000000 0000111112234456799999999999999
Q ss_pred CCCCHHHHHH
Q 003855 765 MRINVTDAAA 774 (791)
Q Consensus 765 ~RPt~~ev~~ 774 (791)
+|+|+.|++.
T Consensus 396 ~RiTl~EAL~ 405 (415)
T KOG0671|consen 396 RRITLREALS 405 (415)
T ss_pred ccccHHHHhc
Confidence 9999999975
No 382
>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase. Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481
Probab=100.00 E-value=1.9e-32 Score=316.46 Aligned_cols=146 Identities=27% Similarity=0.442 Sum_probs=131.6
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
.++|.+.+.||+|+||.||+|... +++.||||++.... ......+..|+.+++.++||||+++++++......++|
T Consensus 3 ~~~y~i~~~LG~G~fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~~~~~~~~lV 82 (669)
T cd05610 3 IEEFVIVKPISRGAFGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSLQSANNVYLV 82 (669)
T ss_pred cCCEEEEEEEecCCCeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEEEECCEEEEE
Confidence 367999999999999999999976 78999999987542 33346788899999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccc
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISK 650 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 650 (791)
|||+.+++|.+++.... .+++..+..++.||+.||.||| ..+|+||||||+|||++.++.+||+|||+++
T Consensus 83 mEy~~g~~L~~li~~~~-~l~~~~~~~i~~qil~aL~yLH----~~gIiHrDLKP~NILl~~~g~vkL~DFGls~ 152 (669)
T cd05610 83 MEYLIGGDVKSLLHIYG-YFDEEMAVKYISEVALALDYLH----RHGIIHRDLKPDNMLISNEGHIKLTDFGLSK 152 (669)
T ss_pred EeCCCCCCHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----hCCEEeCCccHHHEEEcCCCCEEEEeCCCCc
Confidence 99999999999997654 3788999999999999999999 6789999999999999999999999999986
No 383
>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11. Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check
Probab=100.00 E-value=1.6e-32 Score=283.42 Aligned_cols=247 Identities=21% Similarity=0.251 Sum_probs=192.2
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh-----hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEE
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL-----ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALV 575 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~-----~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv 575 (791)
+|.+.+.||+|+||.||+++.. .+..+++|+.+... ......+..|+.++++++||||+++++++.+....++|
T Consensus 1 ~y~i~~~ig~g~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~lv 80 (260)
T cd08222 1 RYILQQRLGKGSFGTVYLVKDKKAVAEERLKVLKEIPVGELNPNETVQANQEAQLLSKLDHPAIVKFHASFLERDAFCII 80 (260)
T ss_pred CceeeeeecCCCCceEEEEEecCCCCcceEEEeccccccccCcchHHHHHHHHHHHHhCCCCcHHHHHHHHhcCCceEEE
Confidence 4778899999999999999865 34556666554311 12234566789999999999999999999999999999
Q ss_pred EecCCCCCHHHHHhh---CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 576 LEFMPNGSLEKWLYS---HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~---~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
|||+++++|.+++.. ....+++..+..++.|+++|+.||| +.+++|+||+|+||++++ +.++++|||+++..
T Consensus 81 ~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lH----~~~i~h~~l~~~nili~~-~~~~l~d~g~~~~~ 155 (260)
T cd08222 81 TEYCEGRDLDCKLEELKHTGKTLSENQVCEWFIQLLLGVHYMH----QRRILHRDLKAKNIFLKN-NLLKIGDFGVSRLL 155 (260)
T ss_pred EEeCCCCCHHHHHHHHhhcccccCHHHHHHHHHHHHHHHHHHH----HcCccccCCChhheEeec-CCEeecccCceeec
Confidence 999999999999874 3445899999999999999999999 678999999999999975 56999999999876
Q ss_pred CCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcch
Q 003855 653 GEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 653 ~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
..... ......|+..|+|||...+..++.++||||||+++|+|++|..||..... ........... .+
T Consensus 156 ~~~~~--~~~~~~~~~~~~~pe~~~~~~~~~~~Dv~slG~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~-----~~ 223 (260)
T cd08222 156 MGSCD--LATTFTGTPYYMSPEALKHQGYDSKSDIWSLGCILYEMCCLAHAFEGQNF-----LSVVLRIVEGP-----TP 223 (260)
T ss_pred CCCcc--cccCCCCCcCccCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCccH-----HHHHHHHHcCC-----CC
Confidence 43322 11223578899999998888889999999999999999999999864211 11111110000 00
Q ss_pred hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 733 NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
..+..++.++.+++.+||+.+|++||++.|+++
T Consensus 224 ---------~~~~~~~~~~~~li~~~l~~~p~~Rp~~~~il~ 256 (260)
T cd08222 224 ---------SLPETYSRQLNSIMQSMLNKDPSLRPSAAEILR 256 (260)
T ss_pred ---------CCcchhcHHHHHHHHHHhcCChhhCcCHHHHhh
Confidence 011244567889999999999999999999975
No 384
>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1. Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co
Probab=100.00 E-value=4.4e-32 Score=290.32 Aligned_cols=265 Identities=24% Similarity=0.264 Sum_probs=191.6
Q ss_pred ccccccccCCCcceEEEEEEec-C--CcEEEEEEeehhh--hHHHHHHHHHHHHHHhc-cCCccceeeeeecc----CCe
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-D--GTDVAIKIFNLQL--ERAFRSFDSECEVLRNV-RHRNLIKILSSCSN----PDF 571 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~--~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~----~~~ 571 (791)
+|++.+.||+|+||.||+++.. + +..||+|++.... ....+.+.+|+++++++ +||||+++++++.. ...
T Consensus 1 ~y~~~~~lg~G~~g~vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~~~~~~~ 80 (332)
T cd07857 1 RYELIKELGQGAYGIVCSARNAETSEEETVAIKKITNVFSKKILAKRALRELKLLRHFRGHKNITCLYDMDIVFPGNFNE 80 (332)
T ss_pred CceEEEEccccCCeEEEEEEeCCCCcCceEEEEEeccccccchhHHHHHHHHHHHHHhcCCCChheeeeeeeeccccCCc
Confidence 4778889999999999999965 4 7889999886432 22345678899999999 59999999987532 245
Q ss_pred eeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 572 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
.++++||+. ++|.+++.... .+++..+..++.||+.||.||| ..+++||||||+||++++++.+||+|||+++.
T Consensus 81 ~~~~~e~~~-~~L~~~l~~~~-~~~~~~~~~~~~qi~~aL~~LH----~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~ 154 (332)
T cd07857 81 LYLYEELME-ADLHQIIRSGQ-PLTDAHFQSFIYQILCGLKYIH----SANVLHRDLKPGNLLVNADCELKICDFGLARG 154 (332)
T ss_pred EEEEEeccc-CCHHHHHhcCC-CCCHHHHHHHHHHHHHHHHHHH----hCCcccCCCCHHHeEEcCCCCEEeCcCCCcee
Confidence 788899885 69999987544 4899999999999999999999 67899999999999999999999999999987
Q ss_pred cCCCCCc--ceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC---
Q 003855 652 LGEGEDS--VTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG--- 725 (791)
Q Consensus 652 ~~~~~~~--~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~--- 725 (791)
+...... .......|+..|+|||+..+ ..++.++||||+||++|+|++|+.||..... ...+...+. .....
T Consensus 155 ~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~~Di~slGv~l~~l~~g~~pf~~~~~-~~~~~~~~~-~~~~~~~~ 232 (332)
T cd07857 155 FSENPGENAGFMTEYVATRWYRAPEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDY-VDQLNQILQ-VLGTPDEE 232 (332)
T ss_pred cccccccccccccCcccCccccCcHHHhCCCCCCcHHHHHHHHHHHHHHHhCCcCCCCCCH-HHHHHHHHH-HhCCCCHH
Confidence 6433221 11223468899999997655 5689999999999999999999999865221 111111111 00000
Q ss_pred -hhhhcchhhh-------h-hHHhh-HHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 726 -LTEVVDANLV-------R-EEQAF-SAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 726 -~~~~~d~~~~-------~-~~~~~-~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.....++... . ..... .....++..+.+++.+|++.+|++|||+.|+++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~P~~R~t~~~ll~ 291 (332)
T cd07857 233 TLSRIGSPKAQNYIRSLPNIPKKPFESIFPNANPLALDLLEKLLAFDPTKRISVEEALE 291 (332)
T ss_pred HHHhhhhhhHHHHHHhccccCCcchHhhCCCCCHHHHHHHHHHccCCcccCCCHHHHhc
Confidence 0000000000 0 00000 000123467889999999999999999999864
No 385
>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the
Probab=100.00 E-value=3.9e-32 Score=278.77 Aligned_cols=236 Identities=28% Similarity=0.310 Sum_probs=192.1
Q ss_pred cCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCH
Q 003855 509 LGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSL 584 (791)
Q Consensus 509 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L 584 (791)
||+|+||.||++... +++.||+|++.... ....+.+..|+.++++++||||+++++.+..+...++||||+++++|
T Consensus 1 lg~G~~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~v~e~~~~~~L 80 (250)
T cd05123 1 LGKGSFGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAFQTEEKLYLVLEYAPGGEL 80 (250)
T ss_pred CCCCCceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHeecCCeeEEEEecCCCCcH
Confidence 699999999999975 58999999987553 23456788999999999999999999999999999999999999999
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecc
Q 003855 585 EKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMT 664 (791)
Q Consensus 585 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~ 664 (791)
.+++.... .+++..+..++.|+++|+.||| ..+++|+||+|+||+++.++.++|+|||.+........ .....
T Consensus 81 ~~~l~~~~-~l~~~~~~~~~~qi~~~l~~lh----~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~ 153 (250)
T cd05123 81 FSHLSKEG-RFSEERARFYAAEIVLALEYLH----SLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGS--RTNTF 153 (250)
T ss_pred HHHHHhcC-CCCHHHHHHHHHHHHHHHHHHH----HCCceecCCCcceEEEcCCCcEEEeecCcceecccCCC--cccCC
Confidence 99998664 3899999999999999999999 67899999999999999999999999999987644321 22334
Q ss_pred cccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHH
Q 003855 665 MATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAK 744 (791)
Q Consensus 665 ~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 744 (791)
.++..|+|||...+..++.++|+||||+++||+++|+.||..... ... ........ ...+
T Consensus 154 ~~~~~~~~Pe~~~~~~~~~~~D~~slG~~~~~l~~g~~p~~~~~~--~~~---~~~~~~~~---------------~~~~ 213 (250)
T cd05123 154 CGTPEYLAPEVLLGKGYGKAVDWWSLGVLLYEMLTGKPPFYAEDR--KEI---YEKILKDP---------------LRFP 213 (250)
T ss_pred cCCccccChHHhCCCCCCchhhHHHHHHHHHHHHHCCCCCCCCCH--HHH---HHHHhcCC---------------CCCC
Confidence 578899999998888889999999999999999999999965321 111 11111100 0011
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCHHH
Q 003855 745 MDCILSIMDLALDCCIESPDMRINVTD 771 (791)
Q Consensus 745 ~~~~~~l~~li~~cl~~~P~~RPt~~e 771 (791)
...+..+.+++.+|+..||++||++++
T Consensus 214 ~~~~~~l~~~i~~~l~~~p~~R~~~~~ 240 (250)
T cd05123 214 EFLSPEARDLISGLLQKDPTKRLGSGG 240 (250)
T ss_pred CCCCHHHHHHHHHHhcCCHhhCCCccc
Confidence 122456789999999999999999954
No 386
>KOG0696 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=4e-33 Score=276.40 Aligned_cols=242 Identities=25% Similarity=0.287 Sum_probs=195.0
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 574 (791)
..+|..+.+||+|+||.|-.|..+ +.+.+|||++++.. .+..+--..|.++++-- +-|.+++++.+++.-+..|+
T Consensus 348 ~tDFnFl~VlGKGSFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScFQTmDRLyF 427 (683)
T KOG0696|consen 348 ATDFNFLMVLGKGSFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCFQTMDRLYF 427 (683)
T ss_pred ecccceEEEeccCccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHhhhhhheee
Confidence 457888899999999999999865 56789999998764 22333345677777766 57899999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
||||+.||+|--.+++-+. +.+..+.-+|..||-||-+|| +++|++||||..||++|.+|++||+|||+++.---
T Consensus 428 VMEyvnGGDLMyhiQQ~Gk-FKEp~AvFYAaEiaigLFFLh----~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~ 502 (683)
T KOG0696|consen 428 VMEYVNGGDLMYHIQQVGK-FKEPVAVFYAAEIAIGLFFLH----SKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIF 502 (683)
T ss_pred EEEEecCchhhhHHHHhcc-cCCchhhhhhHHHHHHhhhhh----cCCeeeeeccccceEeccCCceEeeeccccccccc
Confidence 9999999999999987665 667778889999999999999 88999999999999999999999999999975211
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
...+....+||+.|+|||++...+|+.++|+|||||++|||+.|++||++. .|..+.+.+..+
T Consensus 503 --~~~TTkTFCGTPdYiAPEIi~YqPYgksvDWWa~GVLLyEmlaGQpPFdGe--DE~elF~aI~eh------------- 565 (683)
T KOG0696|consen 503 --DGVTTKTFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGE--DEDELFQAIMEH------------- 565 (683)
T ss_pred --CCcceeeecCCCcccccceEEecccccchhHHHHHHHHHHHHcCCCCCCCC--CHHHHHHHHHHc-------------
Confidence 122334468999999999999999999999999999999999999999873 233333322221
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCC
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRIN 768 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt 768 (791)
....+...+.+..++....+...|.+|..
T Consensus 566 -----nvsyPKslSkEAv~ickg~ltK~P~kRLG 594 (683)
T KOG0696|consen 566 -----NVSYPKSLSKEAVAICKGLLTKHPGKRLG 594 (683)
T ss_pred -----cCcCcccccHHHHHHHHHHhhcCCccccC
Confidence 11222344567788999999999999964
No 387
>KOG1151 consensus Tousled-like protein kinase [Signal transduction mechanisms]
Probab=100.00 E-value=1.9e-33 Score=280.88 Aligned_cols=260 Identities=27% Similarity=0.410 Sum_probs=200.1
Q ss_pred HHHhhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh-------hHHHHHHHHHHHHHHhccCCccceeeeeec-
Q 003855 497 QRATDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL-------ERAFRSFDSECEVLRNVRHRNLIKILSSCS- 567 (791)
Q Consensus 497 ~~~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~- 567 (791)
....++|-+.+.+|+|+|++||+|.. ...+.||||+-.... ....+...+|.++-+.++||-||++++++.
T Consensus 459 ptLn~RYLlLhLLGrGGFSEVyKAFDl~EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyfsl 538 (775)
T KOG1151|consen 459 PTLNDRYLLLHLLGRGGFSEVYKAFDLTEQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYFSL 538 (775)
T ss_pred cchHHHHHHHHHhccccHHHHHHhcccchhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeeeee
Confidence 34457888899999999999999984 467889999864321 223455678999999999999999999995
Q ss_pred cCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC---CCCcEEEe
Q 003855 568 NPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD---ENMAAHVS 644 (791)
Q Consensus 568 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~---~~~~~kl~ 644 (791)
+.+..|-|.|||+|.+|.-|+..+.. +++.+...|+.||+.||.||.+- +.+|+|-||||.|||+. ..|.+||+
T Consensus 539 DtdsFCTVLEYceGNDLDFYLKQhkl-mSEKEARSIiMQiVnAL~YLNEi--kpPIIHYDLKPgNILLv~GtacGeIKIT 615 (775)
T KOG1151|consen 539 DTDSFCTVLEYCEGNDLDFYLKQHKL-MSEKEARSIIMQIVNALKYLNEI--KPPIIHYDLKPGNILLVNGTACGEIKIT 615 (775)
T ss_pred ccccceeeeeecCCCchhHHHHhhhh-hhHHHHHHHHHHHHHHHHHHhcc--CCCeeeeccCCccEEEecCcccceeEee
Confidence 45677899999999999999987654 88899999999999999999853 56899999999999995 46789999
Q ss_pred eeccccccCCCCCcce-----eecccccccccCCCccCC----CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHH
Q 003855 645 DFGISKLLGEGEDSVT-----QTMTMATIGYMAPEYGSE----GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLR 715 (791)
Q Consensus 645 Dfgla~~~~~~~~~~~-----~~~~~g~~~y~aPE~~~~----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~ 715 (791)
|||+++++....+... .+...||.+|++||++.- ...+.|+||||.|||+|.++.|+.||....... ++
T Consensus 616 DFGLSKIMdddSy~~vdGmeLTSQgAGTYWYLPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhnqsQQ-dI- 693 (775)
T KOG1151|consen 616 DFGLSKIMDDDSYNSVDGMELTSQGAGTYWYLPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHNQSQQ-DI- 693 (775)
T ss_pred ecchhhhccCCccCcccceeeecccCceeeecCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCchhHH-HH-
Confidence 9999999865443321 233479999999997543 357889999999999999999999997632211 11
Q ss_pred HHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003855 716 RWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAA 773 (791)
Q Consensus 716 ~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~ 773 (791)
.... .+ +......++.....+.+..++|++|+++.-++|....++.
T Consensus 694 --LqeN------TI----lkAtEVqFP~KPvVsseAkaFIRRCLaYRKeDR~DV~qLA 739 (775)
T KOG1151|consen 694 --LQEN------TI----LKATEVQFPPKPVVSSEAKAFIRRCLAYRKEDRIDVQQLA 739 (775)
T ss_pred --Hhhh------ch----hcceeccCCCCCccCHHHHHHHHHHHHhhhhhhhhHHHHc
Confidence 1100 00 1111122333345567788999999999999998887764
No 388
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.98 E-value=1.5e-32 Score=290.11 Aligned_cols=239 Identities=25% Similarity=0.289 Sum_probs=192.5
Q ss_pred hhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e 577 (791)
++.|.....+|.|+|+.|-.+.. .+++..+||++.... ..-.+|+.++... .||||+++.+.+.+..+.|+|||
T Consensus 321 ~~~y~~~~~~~~gs~s~~~~~~~~~t~~~~~vkii~~~~----~~~~~e~~~~~~~~~h~niv~~~~v~~~~~~~~~v~e 396 (612)
T KOG0603|consen 321 TESYEFREELGEGSFSAVKYCESSPTDQEPAVKIISKRA----DDNQDEIPISLLVRDHPNIVKSHDVYEDGKEIYLVME 396 (612)
T ss_pred chhhccccccCCCCccceeeeeccccccchhheeccccc----cccccccchhhhhcCCCcceeecceecCCceeeeeeh
Confidence 45677777899999999988875 478899999987652 2234466555555 79999999999999999999999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEe-CCCCcEEEeeeccccccCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILL-DENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill-~~~~~~kl~Dfgla~~~~~~~ 656 (791)
.+.||-+.+.+..... ...++..|+.+|+.|+.||| +.+|||||+||+|||+ ++.++++|+|||.++...+.
T Consensus 397 ~l~g~ell~ri~~~~~--~~~e~~~w~~~lv~Av~~LH----~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~- 469 (612)
T KOG0603|consen 397 LLDGGELLRRIRSKPE--FCSEASQWAAELVSAVDYLH----EQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERS- 469 (612)
T ss_pred hccccHHHHHHHhcch--hHHHHHHHHHHHHHHHHHHH----hcCeeecCCChhheeecCCCCcEEEEEechhhhCchh-
Confidence 9999999888876653 22677789999999999999 7899999999999999 69999999999999877554
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
....+-|..|.|||++....|++++|+||+|+++|+|++|+.||.....+.. +.. .+. .+
T Consensus 470 ----~~tp~~t~~y~APEvl~~~~yt~acD~WSLGvlLy~ML~G~tp~~~~P~~~e-i~~----~i~-------~~---- 529 (612)
T KOG0603|consen 470 ----CDTPALTLQYVAPEVLAIQEYTEACDWWSLGVLLYEMLTGRTLFAAHPAGIE-IHT----RIQ-------MP---- 529 (612)
T ss_pred ----hcccchhhcccChhhhccCCCCcchhhHHHHHHHHHHHhCCCccccCCchHH-HHH----hhc-------CC----
Confidence 1223457889999999999999999999999999999999999976433311 111 000 00
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.....++..+.+++..||+.||.+||+|.++..
T Consensus 530 -----~~s~~vS~~AKdLl~~LL~~dP~~Rl~~~~i~~ 562 (612)
T KOG0603|consen 530 -----KFSECVSDEAKDLLQQLLQVDPALRLGADEIGA 562 (612)
T ss_pred -----ccccccCHHHHHHHHHhccCChhhCcChhhhcc
Confidence 011355677889999999999999999999864
No 389
>KOG0668 consensus Casein kinase II, alpha subunit [Signal transduction mechanisms; Cell cycle control, cell division, chromosome partitioning; Transcription]
Probab=99.98 E-value=1.7e-32 Score=251.92 Aligned_cols=277 Identities=21% Similarity=0.333 Sum_probs=205.3
Q ss_pred ccccCCCCChhHHHHHhhccccccccCCCcceEEEEEE-ecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhcc-CCccce
Q 003855 484 PLATWRRTPYLDIQRATDEFNECNLLGTGSFGSVYKGT-ISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVR-HRNLIK 561 (791)
Q Consensus 484 ~~~~~~~~~~~~~~~~~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-h~niv~ 561 (791)
|...|............++|++++++|+|.|++||.|. ..+.+.++||+++.-.. +.+.+|+.+++.++ ||||++
T Consensus 21 p~eYWdYE~~~i~wg~~ddYeivrk~GRGKYSEVFeg~~~~~~eK~ViKiLKPVkk---kKIkREikIL~nL~gg~NIi~ 97 (338)
T KOG0668|consen 21 PREYWDYESLVIDWGNQDDYEIVRKVGRGKYSEVFEGINITNNEKCVIKILKPVKK---KKIKREIKILQNLRGGPNIIK 97 (338)
T ss_pred chhhcchhheeeeccccchHHHHHHHcCccHhhHhcccccCCCceEEEeeechHHH---HHHHHHHHHHHhccCCCCeee
Confidence 33444444444444456899999999999999999998 45788999999975533 46778999999997 999999
Q ss_pred eeeeeccC--CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC-C
Q 003855 562 ILSSCSNP--DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE-N 638 (791)
Q Consensus 562 l~~~~~~~--~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~-~ 638 (791)
+++...++ ..+.+||||+.+.+....-.. +....+...+.++++||.|+| ++||+|||+||.|+++|. .
T Consensus 98 L~DiV~Dp~SktpaLiFE~v~n~Dfk~ly~t----l~d~dIryY~~elLkALdyCH----S~GImHRDVKPhNvmIdh~~ 169 (338)
T KOG0668|consen 98 LLDIVKDPESKTPSLIFEYVNNTDFKQLYPT----LTDYDIRYYIYELLKALDYCH----SMGIMHRDVKPHNVMIDHEL 169 (338)
T ss_pred hhhhhcCccccCchhHhhhhccccHHHHhhh----hchhhHHHHHHHHHHHHhHHH----hcCcccccCCcceeeechhh
Confidence 99999775 456899999999877665433 566778889999999999999 899999999999999994 5
Q ss_pred CcEEEeeeccccccCCCCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHH
Q 003855 639 MAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRW 717 (791)
Q Consensus 639 ~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~ 717 (791)
-..+++|+|+|.++.++... ...+.+..|.-||.+.+ ..|+.+-|+|||||++.+|+..+.||-........+.+.
T Consensus 170 rkLrlIDWGLAEFYHp~~eY---nVRVASRyfKGPELLVdy~~YDYSLD~WS~GcmlA~miFrkepFFhG~dN~DQLVkI 246 (338)
T KOG0668|consen 170 RKLRLIDWGLAEFYHPGKEY---NVRVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVKI 246 (338)
T ss_pred ceeeeeecchHhhcCCCcee---eeeeehhhcCCchheeechhccccHHHHHHHHHHHHHHhccCcccCCCCCHHHHHHH
Confidence 67999999999999876543 34567888999998755 568999999999999999999999985432222222222
Q ss_pred HHHhcCCChhh-------hcchhhhh--------hHHhhH---HHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 718 VKESLPHGLTE-------VVDANLVR--------EEQAFS---AKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 718 ~~~~~~~~~~~-------~~d~~~~~--------~~~~~~---~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.+-.....+.. .+|+.+.. .-..+. ...-..+++.+++.+.+..|-++|||++|++.
T Consensus 247 akVLGt~el~~Yl~KY~i~Ldp~~~~i~~~~~rk~w~~Fi~~~n~hl~~peaiDlldklLrYDHqeRlTakEam~ 321 (338)
T KOG0668|consen 247 AKVLGTDELYAYLNKYQIDLDPQFEDILGRHSRKPWSRFINSENQHLVSPEAIDLLDKLLRYDHQERLTAKEAMA 321 (338)
T ss_pred HHHhChHHHHHHHHHHccCCChhHhhHhhccccccHHHhCCccccccCChHHHHHHHHHHhhccccccchHHHhc
Confidence 21111111111 12222211 000110 01113477889999999999999999999875
No 390
>KOG4236 consensus Serine/threonine protein kinase PKC mu/PKD and related proteins [Signal transduction mechanisms]
Probab=99.98 E-value=6.7e-33 Score=282.47 Aligned_cols=243 Identities=25% Similarity=0.378 Sum_probs=194.3
Q ss_pred ccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCC
Q 003855 506 CNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNG 582 (791)
Q Consensus 506 ~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g 582 (791)
.+.+|.|.||+||-|+.+ +|+.||||++.+-. .+....+.+|+.++++++||.||.+--.|+.++..++|||.+.|.
T Consensus 569 devLGSGQFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~ET~ervFVVMEKl~GD 648 (888)
T KOG4236|consen 569 DEVLGSGQFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMFETPERVFVVMEKLHGD 648 (888)
T ss_pred HhhccCCcceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEeecCCceEEEEehhhcch
Confidence 368999999999999864 89999999997643 344577889999999999999999999999999999999999554
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC---CCcEEEeeeccccccCCCCCcc
Q 003855 583 SLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE---NMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 583 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~---~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
=|.-.+.+....+++....-++.||+.||.||| .++|+|+||||+|||+.+ -.++||||||+||++++..
T Consensus 649 MLEMILSsEkgRL~er~TkFlvtQIL~ALr~LH----~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEks--- 721 (888)
T KOG4236|consen 649 MLEMILSSEKGRLPERITKFLVTQILVALRYLH----FKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKS--- 721 (888)
T ss_pred HHHHHHHhhcccchHHHHHHHHHHHHHHHHHhh----hcceeeccCCchheeeccCCCCCceeeccccceeecchhh---
Confidence 444445556667888888889999999999999 678999999999999964 3579999999999987543
Q ss_pred eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHH
Q 003855 660 TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQ 739 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 739 (791)
.....+||+.|+|||++..+.|...-|+||.|||+|--+.|.-||.+. .++.+-++. ..+..
T Consensus 722 FRrsVVGTPAYLaPEVLrnkGyNrSLDMWSVGVIiYVsLSGTFPFNEd----EdIndQIQN-----------AaFMy--- 783 (888)
T KOG4236|consen 722 FRRSVVGTPAYLAPEVLRNKGYNRSLDMWSVGVIIYVSLSGTFPFNED----EDINDQIQN-----------AAFMY--- 783 (888)
T ss_pred hhhhhcCCccccCHHHHhhccccccccceeeeEEEEEEecccccCCCc----cchhHHhhc-----------ccccc---
Confidence 334578999999999999999999999999999999999999998652 222221111 11110
Q ss_pred hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003855 740 AFSAKMDCILSIMDLALDCCIESPDMRINVTDAA 773 (791)
Q Consensus 740 ~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~ 773 (791)
....+.++.....++|...++..-.+|-+..+.+
T Consensus 784 Pp~PW~eis~~AidlIn~LLqVkm~kRysvdk~l 817 (888)
T KOG4236|consen 784 PPNPWSEISPEAIDLINNLLQVKMRKRYSVDKSL 817 (888)
T ss_pred CCCchhhcCHHHHHHHHHHHHHHHHHhcchHhhc
Confidence 1123446667778888888888888887776543
No 391
>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins. Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha
Probab=99.97 E-value=9.1e-32 Score=273.22 Aligned_cols=221 Identities=19% Similarity=0.142 Sum_probs=176.0
Q ss_pred CcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCHHHHHhh
Q 003855 512 GSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSLEKWLYS 590 (791)
Q Consensus 512 G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 590 (791)
|.||.||+++.. +++.||+|++.... .+..|...+....||||+++++++.+.+..++||||+++|+|.+++..
T Consensus 4 g~~~~v~~~~~~~~~~~~~~K~i~~~~-----~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~lv~e~~~~~~L~~~l~~ 78 (237)
T cd05576 4 GVIDKVLLVMDTRTQQTFILKGLRKSS-----EYSRERLTIIPHCVPNMVCLHKYIVSEDSVFLVLQHAEGGKLWSHISK 78 (237)
T ss_pred cccceEEEEEEccCCcEEEEEeecchh-----hhhhHHHHHHhcCCCceeehhhheecCCeEEEEEecCCCCCHHHHHHH
Confidence 899999999965 78999999986543 223344555556799999999999999999999999999999999976
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecccccccc
Q 003855 591 HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGY 670 (791)
Q Consensus 591 ~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y 670 (791)
.. .+++..+..++.|++.||.||| +.+++||||||+||+++.++.++++|||.+....... ....++..|
T Consensus 79 ~~-~l~~~~~~~~~~ql~~~l~~lH----~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~-----~~~~~~~~y 148 (237)
T cd05576 79 FL-NIPEECVKRWAAEMVVALDALH----REGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSC-----DGEAVENMY 148 (237)
T ss_pred hc-CCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHEEEcCCCCEEEecccchhcccccc-----ccCCcCccc
Confidence 54 3899999999999999999999 6789999999999999999999999999886654321 123456789
Q ss_pred cCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHH
Q 003855 671 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILS 750 (791)
Q Consensus 671 ~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 750 (791)
+|||......++.++||||+|+++|||++|+.|+........ ...... .+..++..
T Consensus 149 ~aPE~~~~~~~~~~~DvwslG~il~el~~g~~~~~~~~~~~~---------------~~~~~~---------~~~~~~~~ 204 (237)
T cd05576 149 CAPEVGGISEETEACDWWSLGAILFELLTGKTLVECHPSGIN---------------THTTLN---------IPEWVSEE 204 (237)
T ss_pred cCCcccCCCCCCchhhHHHHHHHHHHHHHCcchhhcCchhcc---------------cccccC---------CcccCCHH
Confidence 999999888899999999999999999999988653211000 000000 01123456
Q ss_pred HHHHHhhccccCCCCCCCHHH
Q 003855 751 IMDLALDCCIESPDMRINVTD 771 (791)
Q Consensus 751 l~~li~~cl~~~P~~RPt~~e 771 (791)
+.+++.+|++.||++||++.+
T Consensus 205 ~~~li~~~l~~dp~~R~~~~~ 225 (237)
T cd05576 205 ARSLLQQLLQFNPTERLGAGV 225 (237)
T ss_pred HHHHHHHHccCCHHHhcCCCc
Confidence 789999999999999999743
No 392
>KOG0587 consensus Traf2- and Nck-interacting kinase and related germinal center kinase (GCK) family protein kinases [Signal transduction mechanisms]
Probab=99.97 E-value=9.5e-32 Score=291.37 Aligned_cols=252 Identities=24% Similarity=0.334 Sum_probs=204.6
Q ss_pred HhhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeec-----cCCe
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCS-----NPDF 571 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~-----~~~~ 571 (791)
-++.|++.+.||+|.+|.||+++. ++++.+|+|+....... .++++.|.++++.. +|||++.++|++. .++.
T Consensus 17 p~d~~ei~evig~Gtygkv~k~k~~~~~~~aa~kI~~~~~d~-deEiE~eynil~~~~~hpnv~~fyg~~~k~~~~~~Dq 95 (953)
T KOG0587|consen 17 PADIFEIIEVIGNGTYGKVYKGRHVKTGQLAAIKIMDPTEDE-EEEIELEYNMLKKYSHHPNVATFYGAFIKKDPGNGDQ 95 (953)
T ss_pred CCCccEEEEEEeeccceeEEEEeeeecCceeeeEeecCCccc-cHHHHHHHHHHHhccCCCCcceEEEEEEEecCCCCCe
Confidence 356789999999999999999984 58899999998766433 36677899999888 7999999999984 4688
Q ss_pred eeEEEecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccc
Q 003855 572 KALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISK 650 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 650 (791)
.|+|||||.+||..|.++.- +..+.|..+..|++.++.|+.||| ...++|||||-.|||++.++.||++|||.+.
T Consensus 96 LWLVMEfC~gGSVTDLVKn~~g~rl~E~~IaYI~re~lrgl~HLH----~nkviHRDikG~NiLLT~e~~VKLvDFGvSa 171 (953)
T KOG0587|consen 96 LWLVMEFCGGGSVTDLVKNTKGNRLKEEWIAYILREILRGLAHLH----NNKVIHRDIKGQNVLLTENAEVKLVDFGVSA 171 (953)
T ss_pred EEEEeeccCCccHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHh----hcceeeecccCceEEEeccCcEEEeeeeeee
Confidence 99999999999999999843 556899999999999999999999 5679999999999999999999999999998
Q ss_pred ccCCCCCcceeecccccccccCCCccCC-----CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC
Q 003855 651 LLGEGEDSVTQTMTMATIGYMAPEYGSE-----GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG 725 (791)
Q Consensus 651 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~-----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~ 725 (791)
.+... .......+||+.|||||++.- ..|+..+|+||+|++..||.-|.+|+-++.+....+. ++..
T Consensus 172 QldsT--~grRnT~iGtP~WMAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraLF~------IpRN 243 (953)
T KOG0587|consen 172 QLDST--VGRRNTFIGTPYWMAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRALFL------IPRN 243 (953)
T ss_pred eeecc--cccccCcCCCcccccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhhcc------CCCC
Confidence 76432 223445689999999997643 3477799999999999999999999987765432110 1111
Q ss_pred hhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 726 LTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 726 ~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
. +...-.+.....++.++|..|+..|-+.||++.++++
T Consensus 244 P-----------PPkLkrp~kWs~~FndFIs~cL~Kd~e~RP~~~~ll~ 281 (953)
T KOG0587|consen 244 P-----------PPKLKRPKKWSKKFNDFISTCLVKDYEQRPSTEELLK 281 (953)
T ss_pred C-----------CccccchhhHHHHHHHHHHHHHhhccccCcchhhhcc
Confidence 0 0111223456788999999999999999999998764
No 393
>KOG0608 consensus Warts/lats-like serine threonine kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.97 E-value=4.8e-32 Score=281.86 Aligned_cols=207 Identities=23% Similarity=0.375 Sum_probs=176.5
Q ss_pred hccccccccCCCcceEEEEEE-ecCCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGT-ISDGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
.-|..++.||-|+||+|+.++ .++...||.|.+.+.. +.+....+.|-.+|...+.+.||+++..|.+.+.+|+||
T Consensus 629 SmFvkik~iGvGAFGeV~Lv~KvDT~~lYAmKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyySFQDkdnLYFVM 708 (1034)
T KOG0608|consen 629 SMFVKIKTIGVGAFGEVCLVRKVDTRALYAMKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYSFQDKDNLYFVM 708 (1034)
T ss_pred cceEEEeeecccccceeEEEeecchhhHHHHhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEEeccCCceEEEE
Confidence 347888999999999999997 4466779999987664 566778899999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC---
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG--- 653 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~--- 653 (791)
+|++||++-.+|...+. +++.-...++..++.|+++.| ..|+|||||||+|||||.+|++||+|||+++-+.
T Consensus 709 dYIPGGDmMSLLIrmgI-FeE~LARFYIAEltcAiesVH----kmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTH 783 (1034)
T KOG0608|consen 709 DYIPGGDMMSLLIRMGI-FEEDLARFYIAELTCAIESVH----KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 783 (1034)
T ss_pred eccCCccHHHHHHHhcc-CHHHHHHHHHHHHHHHHHHHH----hccceecccCccceEEccCCceeeeeccccccceecc
Confidence 99999999999987765 566666667889999999999 8999999999999999999999999999996332
Q ss_pred ------CCCCc-------------------------------ceeecccccccccCCCccCCCCCCccccHHhHHHHHHH
Q 003855 654 ------EGEDS-------------------------------VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLME 696 (791)
Q Consensus 654 ------~~~~~-------------------------------~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~e 696 (791)
.+... ......+||..|+|||++....|+..+|+||.||||||
T Consensus 784 dskYYq~gdH~RqDSmep~~e~~d~~~~lkvL~~ra~~~h~r~~ahslvgt~nyiapevl~r~g~~q~cdwws~gvil~e 863 (1034)
T KOG0608|consen 784 DSKYYQEGDHHRQDSMEPSPEWADISKCLKVLERRAMRQHQRILAHSLVGTPNYIAPEVLARTGYTQLCDWWSVGVILYE 863 (1034)
T ss_pred ccccccCCCccccccCCCchhhccccccchHHHHHHHhhhhhhhhhhhcCCCcccChHHhcccCccccchhhHhhHHHHH
Confidence 11000 00123479999999999999999999999999999999
Q ss_pred HHhCCCCCCccccCcc
Q 003855 697 TFTRKRPTDEMFTGEM 712 (791)
Q Consensus 697 lltg~~p~~~~~~~~~ 712 (791)
|+.|+.||....+++.
T Consensus 864 m~~g~~pf~~~tp~~t 879 (1034)
T KOG0608|consen 864 MLVGQPPFLADTPGET 879 (1034)
T ss_pred HhhCCCCccCCCCCcc
Confidence 9999999987666654
No 394
>KOG0984 consensus Mitogen-activated protein kinase (MAPK) kinase MKK3/MKK6 [Signal transduction mechanisms]
Probab=99.97 E-value=5.3e-32 Score=245.18 Aligned_cols=214 Identities=27% Similarity=0.345 Sum_probs=172.5
Q ss_pred hhccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhh-hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQL-ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~-~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~ 576 (791)
.++...+..||+|++|.|-+-++ .+|+..|||.+.... .+..+....|+.+..+. .+|.+|.++|...+....++.|
T Consensus 45 ad~L~~i~elGrGayG~vekmrh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~~regdvwIcM 124 (282)
T KOG0984|consen 45 ADDLVGIEELGRGAYGVVEKMRHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGALFREGDVWICM 124 (282)
T ss_pred hhhhhhhhhhcCCccchhhheeeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhhhccccEEEeH
Confidence 34555667899999999988875 489999999987554 23345566677766554 7999999999999999999999
Q ss_pred ecCCCCCHHHHHh---hCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccC
Q 003855 577 EFMPNGSLEKWLY---SHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 577 e~~~~g~L~~~l~---~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
|.|.. ||..+-. ..+...++.-+-+||..+.+||.|||+ ...++|||+||+|||++.+|+||+||||.+..+.
T Consensus 125 E~M~t-Sldkfy~~v~~~g~~ipE~vlGkIa~Svv~al~~L~~---kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~ 200 (282)
T KOG0984|consen 125 ELMDT-SLDKFYRKVLKKGGTIPEDVLGKIAVSVVHALEFLHS---KLSVIHRDVKPSNILINYDGQVKICDFGISGYLV 200 (282)
T ss_pred HHhhh-hHHHHHHHHHhcCCcCchHHhhHhHHHHHHHHHHHHH---HhhhhhccCCcceEEEccCCcEEEcccccceeeh
Confidence 99954 8776654 456668999999999999999999995 5679999999999999999999999999998764
Q ss_pred CCCCcceeecccccccccCCCccCC----CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHH
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSE----GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKE 720 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~----~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~ 720 (791)
+ +...+...|-..|||||.+.. ..|+-|+||||+|+++.||.+++.||+........+.+.+..
T Consensus 201 d---SiAkt~daGCkpYmaPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee 268 (282)
T KOG0984|consen 201 D---SIAKTMDAGCKPYMAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE 268 (282)
T ss_pred h---hhHHHHhcCCCccCChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence 3 333444567778999997543 468999999999999999999999998765555555554443
No 395
>KOG0614 consensus cGMP-dependent protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.6e-32 Score=278.97 Aligned_cols=242 Identities=24% Similarity=0.332 Sum_probs=198.5
Q ss_pred hccccccccCCCcceEEEEEEecCCc-EEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGT-DVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~-~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
.+++.+..+|-|+||.|-.++.+... .+|+|++++.. .++.+.+..|-.+|.+.+.|.||+++-.|.+....|+.|
T Consensus 420 ~dl~~iaTLGvGgFGRVELV~~~~~~~~fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrTfrd~kyvYmLm 499 (732)
T KOG0614|consen 420 SDLKRIATLGVGGFGRVELVKVNSQKATFALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRTFRDSKYVYMLM 499 (732)
T ss_pred hhhhhhhhcccCccceEEEEEecccchHHHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHHhccchhhhhhH
Confidence 45667788999999999998876433 48888886542 455677888999999999999999999999999999999
Q ss_pred ecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC
Q 003855 577 EFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE 656 (791)
Q Consensus 577 e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~ 656 (791)
|-|-||.++..++.++. ++..+..-++..+.+|++||| +++||+|||||+|.++|.+|-+||.|||+|+.+..+.
T Consensus 500 EaClGGElWTiLrdRg~-Fdd~tarF~~acv~EAfeYLH----~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~ 574 (732)
T KOG0614|consen 500 EACLGGELWTILRDRGS-FDDYTARFYVACVLEAFEYLH----RKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGR 574 (732)
T ss_pred HhhcCchhhhhhhhcCC-cccchhhhhHHHHHHHHHHHH----hcCceeccCChhheeeccCCceEEeehhhHHHhccCC
Confidence 99999999999998776 677777778889999999999 7899999999999999999999999999999887654
Q ss_pred CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 657 DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 657 ~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
. .-..+||+.|.|||++..+..+.++|.||+|+++|||++|.+||.+..+. ..+....+ ++..
T Consensus 575 K---TwTFcGTpEYVAPEIILnKGHD~avDyWaLGIli~ELL~G~pPFs~~dpm-ktYn~ILk-----Gid~-------- 637 (732)
T KOG0614|consen 575 K---TWTFCGTPEYVAPEIILNKGHDRAVDYWALGILIYELLTGSPPFSGVDPM-KTYNLILK-----GIDK-------- 637 (732)
T ss_pred c---eeeecCCcccccchhhhccCcchhhHHHHHHHHHHHHHcCCCCCCCCchH-HHHHHHHh-----hhhh--------
Confidence 3 22367999999999999999999999999999999999999999874322 11111111 1110
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCC
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRIN 768 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt 768 (791)
..-+..+++...++|++.+..+|.+|..
T Consensus 638 ----i~~Pr~I~k~a~~Lik~LCr~~P~ERLG 665 (732)
T KOG0614|consen 638 ----IEFPRRITKTATDLIKKLCRDNPTERLG 665 (732)
T ss_pred ----hhcccccchhHHHHHHHHHhcCcHhhhc
Confidence 1112345567789999999999999986
No 396
>KOG0695 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.97 E-value=1.4e-31 Score=258.60 Aligned_cols=247 Identities=20% Similarity=0.267 Sum_probs=198.6
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~l 574 (791)
.++|+..++||+|+|+.|-.++++ +.+.+|+|+++++. .+.....+.|..+..+. +||.+|.+..+|..+...++
T Consensus 249 l~df~ll~vigrgsyakvl~~~~~~t~qiyamkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscfqtesrlff 328 (593)
T KOG0695|consen 249 LQDFDLLRVIGRGSYAKVLLVRLKKTDQIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCFQTESRLFF 328 (593)
T ss_pred cccceeeeeecCcchhhhhheehcccceeeehhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhhcccceEEE
Confidence 468999999999999999999864 78889999998764 44566778888888887 79999999999999999999
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
|.||++||+|--+++.++. ++++...-+...|.-||.||| +++|++||+|..|||+|..|++|++|||+++.--.
T Consensus 329 vieyv~ggdlmfhmqrqrk-lpeeharfys~ei~lal~flh----~rgiiyrdlkldnvlldaeghikltdygmcke~l~ 403 (593)
T KOG0695|consen 329 VIEYVNGGDLMFHMQRQRK-LPEEHARFYSAEICLALNFLH----ERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLG 403 (593)
T ss_pred EEEEecCcceeeehhhhhc-CcHHHhhhhhHHHHHHHHHHh----hcCeeeeeccccceEEccCCceeecccchhhcCCC
Confidence 9999999999888876655 888888889999999999999 78999999999999999999999999999975322
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCcc--ccCcchHHHHHHHhcCCChhhhcch
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEM--FTGEMSLRRWVKESLPHGLTEVVDA 732 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~--~~~~~~~~~~~~~~~~~~~~~~~d~ 732 (791)
.. ...+..+||+.|.|||++.+..|...+|+|++||+++||+.|+.||+.. ...++...++.-+.+
T Consensus 404 ~g--d~tstfcgtpnyiapeilrgeeygfsvdwwalgvlmfemmagrspfdivgm~n~d~ntedylfqvi---------- 471 (593)
T KOG0695|consen 404 PG--DTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFEMMAGRSPFDIVGMDNPDMNTEDYLFQVI---------- 471 (593)
T ss_pred CC--cccccccCCCcccchhhhcccccCceehHHHHHHHHHHHHcCCCCcceecCCCcccchhHHHHHHH----------
Confidence 22 2334568999999999999999999999999999999999999999853 333443333332221
Q ss_pred hhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCC
Q 003855 733 NLVREEQAFSAKMDCILSIMDLALDCCIESPDMRI 767 (791)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RP 767 (791)
.+..-+.+. ..+-....++..-+++||.+|.
T Consensus 472 --lekqiripr--slsvkas~vlkgflnkdp~erl 502 (593)
T KOG0695|consen 472 --LEKQIRIPR--SLSVKASHVLKGFLNKDPKERL 502 (593)
T ss_pred --hhhcccccc--eeehhhHHHHHHhhcCCcHHhc
Confidence 111111111 1123345788888999999986
No 397
>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain. Phosphotransferases. Serine or threonine-specific kinase subfamily.
Probab=99.97 E-value=2.3e-30 Score=264.05 Aligned_cols=238 Identities=31% Similarity=0.372 Sum_probs=192.8
Q ss_pred cceEEEEEEec-CCcEEEEEEeehhhhHH-HHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCHHHHHhh
Q 003855 513 SFGSVYKGTIS-DGTDVAIKIFNLQLERA-FRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSLEKWLYS 590 (791)
Q Consensus 513 ~~g~Vy~~~~~-~~~~vavK~~~~~~~~~-~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~ 590 (791)
+||.||+|... +++.||+|++....... .+.+.+|++.+++++|+|++++++++......++|+||+++++|.+++..
T Consensus 1 ~~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~l~~e~~~~~~L~~~~~~ 80 (244)
T smart00220 1 SFGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVFEDEDKLYLVMEYCDGGDLFDLLKK 80 (244)
T ss_pred CceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhheeeCCEEEEEEeCCCCCCHHHHHHh
Confidence 58999999986 58999999987655433 67889999999999999999999999998999999999999999999986
Q ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecccccccc
Q 003855 591 HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGY 670 (791)
Q Consensus 591 ~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y 670 (791)
... +++..+..++.++++++.||| ..+++|+||+|+||++++++.++++|||.+....... ......++..|
T Consensus 81 ~~~-~~~~~~~~~~~~l~~~l~~lh----~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~---~~~~~~~~~~~ 152 (244)
T smart00220 81 RGR-LSEDEARFYARQILSALEYLH----SNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGG---LLTTFVGTPEY 152 (244)
T ss_pred ccC-CCHHHHHHHHHHHHHHHHHHH----HcCeecCCcCHHHeEECCCCcEEEccccceeeecccc---ccccccCCcCC
Confidence 554 889999999999999999999 6789999999999999999999999999998765432 22234578899
Q ss_pred cCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHH
Q 003855 671 MAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILS 750 (791)
Q Consensus 671 ~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~ 750 (791)
+|||......++.++||||||+++|++++|..||......+ ...++........ ......++.+
T Consensus 153 ~~pE~~~~~~~~~~~Di~slG~~l~~l~~~~~p~~~~~~~~-~~~~~~~~~~~~~---------------~~~~~~~~~~ 216 (244)
T smart00220 153 MAPEVLLGKGYGKAVDVWSLGVILYELLTGKPPFPGDDQLL-ELFKKIGKPKPPF---------------PPPEWKISPE 216 (244)
T ss_pred CCHHHHccCCCCchhhHHHHHHHHHHHHhCCCCCCCCCcHH-HHHHHHhccCCCC---------------ccccccCCHH
Confidence 99999888889999999999999999999999986531111 1111111100000 0000004467
Q ss_pred HHHHHhhccccCCCCCCCHHHHHH
Q 003855 751 IMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 751 l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+.+++.+|+..+|++||++.++++
T Consensus 217 ~~~~i~~~l~~~p~~Rp~~~~~~~ 240 (244)
T smart00220 217 AKDLIRKLLVKDPEKRLTAEEALQ 240 (244)
T ss_pred HHHHHHHHccCCchhccCHHHHhh
Confidence 889999999999999999999986
No 398
>PLN03225 Serine/threonine-protein kinase SNT7; Provisional
Probab=99.97 E-value=5.2e-31 Score=296.56 Aligned_cols=258 Identities=22% Similarity=0.241 Sum_probs=168.9
Q ss_pred HhhccccccccCCCcceEEEEEEec-C----CcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeee------ec
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-D----GTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSS------CS 567 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~----~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~------~~ 567 (791)
..++|+..+.||+|+||.||+|+.. + +..||||++...... +....+ .+....+.++..++.. +.
T Consensus 130 ~~~~y~l~~~LG~G~FG~VYka~~~~~~~~~~~~vAvK~~~~~~~~--e~~~~e--~l~~~~~~~~~~~~~~~~~~~~~~ 205 (566)
T PLN03225 130 KKDDFVLGKKLGEGAFGVVYKASLVNKQSKKEGKYVLKKATEYGAV--EIWMNE--RVRRACPNSCADFVYGFLEPVSSK 205 (566)
T ss_pred ccCCeEEeEEEeeCCCeEEEEEEEcCCccccCcEEEEEEecccchh--HHHHHH--HHHhhchhhHHHHHHhhhcccccc
Confidence 4578999999999999999999975 4 689999987543211 111111 1222223333322222 24
Q ss_pred cCCeeeEEEecCCCCCHHHHHhhCCCCC-------------------CHHHHHHHHHHHHHHHHHHHccCCCCCeEecCC
Q 003855 568 NPDFKALVLEFMPNGSLEKWLYSHNYFL-------------------DILERLNIMIDVGSALEYLHHGHSSAPIIHCDL 628 (791)
Q Consensus 568 ~~~~~~lv~e~~~~g~L~~~l~~~~~~~-------------------~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dl 628 (791)
.....++||||+++++|.+++....... ....+..++.|++.||+||| +.+|+||||
T Consensus 206 ~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~~qll~aL~yLH----~~gIiHRDL 281 (566)
T PLN03225 206 KEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIMRQILFALDGLH----STGIVHRDV 281 (566)
T ss_pred cCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHHHHHHHHHHHHH----HCCEEeCcC
Confidence 5667899999999999999997543211 12345679999999999999 678999999
Q ss_pred CCCCeEeCC-CCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCC----------------------CCCccc
Q 003855 629 KPTNILLDE-NMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEG----------------------IVSAKC 685 (791)
Q Consensus 629 k~~Nill~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~----------------------~~~~~~ 685 (791)
||+|||+++ ++.+||+|||+|+.+...... ......++++|+|||.+... .++.++
T Consensus 282 KP~NILl~~~~~~~KL~DFGlA~~l~~~~~~-~~~~~~~t~~Y~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~ 360 (566)
T PLN03225 282 KPQNIIFSEGSGSFKIIDLGAAADLRVGINY-IPKEFLLDPRYAAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRF 360 (566)
T ss_pred CHHHEEEeCCCCcEEEEeCCCcccccccccc-CCcccccCCCccChHHhhccCCCCCCccccccccccchhccccCCCCc
Confidence 999999985 689999999999866433222 22334688999999954321 234567
Q ss_pred cHHhHHHHHHHHHhCCCCCCcccc--------CcchHHHHHHHhcCCChhhhcchhhhhh-HHhhHHHHHHHHHHHHHHh
Q 003855 686 DVYSYGVLLMETFTRKRPTDEMFT--------GEMSLRRWVKESLPHGLTEVVDANLVRE-EQAFSAKMDCILSIMDLAL 756 (791)
Q Consensus 686 Dv~s~G~vl~elltg~~p~~~~~~--------~~~~~~~~~~~~~~~~~~~~~d~~~~~~-~~~~~~~~~~~~~l~~li~ 756 (791)
|||||||++|||+++..|++.... .......|... +.+....+ ...+...........+++.
T Consensus 361 DVwSlGviL~el~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~d~~~~~~~dLi~ 431 (566)
T PLN03225 361 DIYSAGLIFLQMAFPNLRSDSNLIQFNRQLKRNDYDLVAWRKL---------VEPRASPDLRRGFEVLDLDGGAGWELLK 431 (566)
T ss_pred ccHHHHHHHHHHHhCcCCCchHHHHHHHHHHhcCCcHHHHHHh---------hccccchhhhhhhhhccccchHHHHHHH
Confidence 999999999999997766543100 00111122111 11110000 0000000011233558999
Q ss_pred hccccCCCCCCCHHHHHH
Q 003855 757 DCCIESPDMRINVTDAAA 774 (791)
Q Consensus 757 ~cl~~~P~~RPt~~ev~~ 774 (791)
+|++.||++|||+.|+++
T Consensus 432 ~mL~~dP~kR~ta~e~L~ 449 (566)
T PLN03225 432 SMMRFKGRQRISAKAALA 449 (566)
T ss_pred HHccCCcccCCCHHHHhC
Confidence 999999999999999987
No 399
>PLN03224 probable serine/threonine protein kinase; Provisional
Probab=99.97 E-value=2.3e-30 Score=283.21 Aligned_cols=257 Identities=23% Similarity=0.252 Sum_probs=180.0
Q ss_pred HhhccccccccCCCcceEEEEEEe-----------------cCCcEEEEEEeehhhhHHHH--------------HHHHH
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTI-----------------SDGTDVAIKIFNLQLERAFR--------------SFDSE 547 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~-----------------~~~~~vavK~~~~~~~~~~~--------------~~~~e 547 (791)
..++|++.++||+|+||+||+|.. ..++.||||.+........+ ....|
T Consensus 143 ~~d~F~i~~~LG~GgFG~VYkG~~~~~~~~~v~~~~~~~~~~~~r~VAVK~l~~~~~~~~~~fl~e~~~~~~~~e~~~vE 222 (507)
T PLN03224 143 SSDDFQLRDKLGGGNFGITFEGLRLQADDQGVTQRSKLTAEQKKRRVVLKRVNMDRQGVRQDFLKTGTLAKGSAETGMVE 222 (507)
T ss_pred cccCceEeeEeecCCCeEEEEEEecccccchhhhhccccccccCceEEEEEecccchhhHHHHHhhhhhhhcccchhHHH
Confidence 467999999999999999999964 23568999998654322222 23447
Q ss_pred HHHHHhccCCcc-----ceeeeeecc--------CCeeeEEEecCCCCCHHHHHhhCC----------------------
Q 003855 548 CEVLRNVRHRNL-----IKILSSCSN--------PDFKALVLEFMPNGSLEKWLYSHN---------------------- 592 (791)
Q Consensus 548 ~~~l~~l~h~ni-----v~l~~~~~~--------~~~~~lv~e~~~~g~L~~~l~~~~---------------------- 592 (791)
+.++.+++|.++ ++++++|.. .+..++||||+++|+|.++++...
T Consensus 223 ~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~~~~~ 302 (507)
T PLN03224 223 AYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIPDNMP 302 (507)
T ss_pred HHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchhhhcc
Confidence 777777766554 677777643 356799999999999999987421
Q ss_pred -CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeeccccccccc
Q 003855 593 -YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYM 671 (791)
Q Consensus 593 -~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~ 671 (791)
..+++..+..++.|++.||.||| +.+|+||||||+||+++.++.+||+|||+++........ ......+++.|+
T Consensus 303 ~~~~~~~~~~~i~~ql~~aL~~lH----~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~-~~~~g~~tp~Y~ 377 (507)
T PLN03224 303 QDKRDINVIKGVMRQVLTGLRKLH----RIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINF-NPLYGMLDPRYS 377 (507)
T ss_pred cccCCHHHHHHHHHHHHHHHHHHH----HCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCcc-CccccCCCccee
Confidence 12456778899999999999999 678999999999999999999999999999765433221 111223478999
Q ss_pred CCCccCCCC----------------------CCccccHHhHHHHHHHHHhCCC-CCCccccCc-------chHHHHHHHh
Q 003855 672 APEYGSEGI----------------------VSAKCDVYSYGVLLMETFTRKR-PTDEMFTGE-------MSLRRWVKES 721 (791)
Q Consensus 672 aPE~~~~~~----------------------~~~~~Dv~s~G~vl~elltg~~-p~~~~~~~~-------~~~~~~~~~~ 721 (791)
|||.+.... ...+.||||+||+++||++|.. |+....... .....|....
T Consensus 378 aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~~~~~f~~~~~~~~~~~~~~r~~~ 457 (507)
T PLN03224 378 PPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVANIRLFNTELRQYDNDLNRWRMYK 457 (507)
T ss_pred ChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCccchhhhhhHHhhccchHHHHHhhc
Confidence 999765322 1134799999999999999875 664321111 1111221100
Q ss_pred cCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCC---CCCCCHHHHHH
Q 003855 722 LPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESP---DMRINVTDAAA 774 (791)
Q Consensus 722 ~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P---~~RPt~~ev~~ 774 (791)
.. ...++..........+++.+++..+| .+|+|++|+++
T Consensus 458 ~~--------------~~~~~~~d~~s~~~~dLi~~LL~~~~~~~~~RlSa~eaL~ 499 (507)
T PLN03224 458 GQ--------------KYDFSLLDRNKEAGWDLACKLITKRDQANRGRLSVGQALS 499 (507)
T ss_pred cc--------------CCCcccccccChHHHHHHHHHhccCCCCcccCCCHHHHhC
Confidence 00 00111112344667799999999766 68999999985
No 400
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.9e-33 Score=305.71 Aligned_cols=387 Identities=29% Similarity=0.392 Sum_probs=241.3
Q ss_pred ccCCccccCCCCCCeeecCCCcccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccC
Q 003855 3 GQIPTEIGNLQNLQYLVFAENNLSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSI 82 (791)
Q Consensus 3 g~lp~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~ 82 (791)
|+.|..+..+.+|+.|+++.|-|. ..|.+..++.+|++|.|.+|++. .+|..+.. +.+|+.|+++.|++. ..|..+
T Consensus 58 ~~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~-lknl~~LdlS~N~f~-~~Pl~i 133 (1081)
T KOG0618|consen 58 SSFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISE-LKNLQYLDLSFNHFG-PIPLVI 133 (1081)
T ss_pred ccCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHh-hhcccccccchhccC-CCchhH
Confidence 344555555555555555555554 33455555555555555555554 55555544 455555555555555 334333
Q ss_pred cCCCC-------------------CCEEeccCccccccccccccccccccccccccccccccCCCccccccccccCCCCC
Q 003855 83 TNATK-------------------LVALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRN 143 (791)
Q Consensus 83 ~~l~~-------------------L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~ 143 (791)
..++. .+.++|..|.+.+.....+..+.+ .|+|++|.+..+. +..+++
T Consensus 134 ~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~~~d-----------ls~~~~ 200 (1081)
T KOG0618|consen 134 EVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEMEVLD-----------LSNLAN 200 (1081)
T ss_pred HhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhhhhh-----------hhhccc
Confidence 33333 334444444444444445555544 5777777776332 555666
Q ss_pred CcEEEccCCCCcccCChhhhhhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcc
Q 003855 144 LTILSFGSNPLGGILPPVIGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLR 223 (791)
Q Consensus 144 L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~ 223 (791)
|+.|....|++..... .-++|+.|+.++|.+....+.. .-.+|+++++++|++++ .|+++..+.+|+.|+..
T Consensus 201 l~~l~c~rn~ls~l~~-----~g~~l~~L~a~~n~l~~~~~~p--~p~nl~~~dis~n~l~~-lp~wi~~~~nle~l~~n 272 (1081)
T KOG0618|consen 201 LEVLHCERNQLSELEI-----SGPSLTALYADHNPLTTLDVHP--VPLNLQYLDISHNNLSN-LPEWIGACANLEALNAN 272 (1081)
T ss_pred hhhhhhhhcccceEEe-----cCcchheeeeccCcceeecccc--ccccceeeecchhhhhc-chHHHHhcccceEeccc
Confidence 6666666666653211 1134566666666665322221 12456666666666663 33666666666666666
Q ss_pred cccCcccCCccccccCCCceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCCCCc----------------------
Q 003855 224 NNNLEGSIPYDLCHLKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPS---------------------- 281 (791)
Q Consensus 224 ~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~---------------------- 281 (791)
+|+|+ .+|..+...++|+.|++.+|.+. -+|.....+++|++|+|..|+|....+.
T Consensus 273 ~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~~ln~s~n~l~~l 350 (1081)
T KOG0618|consen 273 HNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLNTLNVSSNKLSTL 350 (1081)
T ss_pred chhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHHHHhhhhcccccc
Confidence 66664 55555555566666666666665 4444455556666666666665422111
Q ss_pred ---cccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccccccccCCCCCCcccCCC
Q 003855 282 ---SLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQGPIPESVGSL 358 (791)
Q Consensus 282 ---~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l 358 (791)
.=..+..|+.|++.+|.+++..-..+.+.++|+.|+|++|+|.......+.++..|++|+||+|+++ .+|..+..+
T Consensus 351 p~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~Lp~tva~~ 429 (1081)
T KOG0618|consen 351 PSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-TLPDTVANL 429 (1081)
T ss_pred ccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-hhhHHHHhh
Confidence 1112345677888888888877777888889999999999998555556788889999999999998 788888889
Q ss_pred CCCcEEEccCCccCCCCchhhhhcccCceEEccCCCCcccC-CCCCCCcCCccccccCCccc
Q 003855 359 ISLESLDLSGNNLSGKIPKSLETLSQLKQFNVSHNRLEGEI-PVKGSFKNFSVESFFGNYAL 419 (791)
Q Consensus 359 ~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~-~~~~~~~~l~~~~~~~n~~~ 419 (791)
+.|++|...+|++. ..| .+..++.|+.+|++.|+|+... |....+++|+.+.+.||.+.
T Consensus 430 ~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSGN~~l 489 (1081)
T KOG0618|consen 430 GRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSGNTRL 489 (1081)
T ss_pred hhhHHHhhcCCcee-ech-hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccCCccc
Confidence 99999999889888 666 7888899999999999987643 44445578888888898863
No 401
>KOG1027 consensus Serine/threonine protein kinase and endoribonuclease ERN1/IRE1, sensor of the unfolded protein response pathway [Signal transduction mechanisms]
Probab=99.97 E-value=2.5e-31 Score=286.85 Aligned_cols=244 Identities=29% Similarity=0.449 Sum_probs=188.8
Q ss_pred cccccccCCCcce-EEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEecCC
Q 003855 503 FNECNLLGTGSFG-SVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 503 ~~~~~~ig~G~~g-~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
|...+.+|.|+-| .||+|.+ +|+.||||++-.. ......+|+..++.- +|||||++++.-.++...|+..|.|.
T Consensus 511 ~~~~eilG~Gs~Gt~Vf~G~y-e~R~VAVKrll~e---~~~~A~rEi~lL~eSD~H~NviRyyc~E~d~qF~YIalELC~ 586 (903)
T KOG1027|consen 511 FSPKEILGYGSNGTVVFRGVY-EGREVAVKRLLEE---FFDFAQREIQLLQESDEHPNVIRYYCSEQDRQFLYIALELCA 586 (903)
T ss_pred eccHHHcccCCCCcEEEEEee-CCceehHHHHhhH---hHHHHHHHHHHHHhccCCCceEEEEeeccCCceEEEEehHhh
Confidence 3344678999987 5799999 6889999987533 334567899999988 69999999999999999999999995
Q ss_pred CCCHHHHHhhCCC--C-CCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC---C--CcEEEeeecccccc
Q 003855 581 NGSLEKWLYSHNY--F-LDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE---N--MAAHVSDFGISKLL 652 (791)
Q Consensus 581 ~g~L~~~l~~~~~--~-~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~---~--~~~kl~Dfgla~~~ 652 (791)
.+|.+++..... . ........+..|+++||+||| +.+||||||||.||||+. + ..++|+|||+++.+
T Consensus 587 -~sL~dlie~~~~d~~~~~~i~~~~~l~q~~~GlaHLH----sl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl 661 (903)
T KOG1027|consen 587 -CSLQDLIESSGLDVEMQSDIDPISVLSQIASGLAHLH----SLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKL 661 (903)
T ss_pred -hhHHHHHhccccchhhcccccHHHHHHHHHHHHHHHH----hcccccccCCCceEEEEccCCCcceeEEeccccccccc
Confidence 599999987411 1 111445678899999999999 678999999999999975 3 46899999999998
Q ss_pred CCCCCcc-eeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhC-CCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 653 GEGEDSV-TQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 653 ~~~~~~~-~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg-~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
..+..+. ......||.||+|||.+....-+.++||||+|||+|+.++| ..||......+..+.. +.....
T Consensus 662 ~~~~sS~~r~s~~sGt~GW~APE~L~~~~~~~avDiFslGCvfyYvltgG~HpFGd~~~R~~NIl~--------~~~~L~ 733 (903)
T KOG1027|consen 662 AGGKSSFSRLSGGSGTSGWQAPEQLREDRKTQAVDIFSLGCVFYYVLTGGSHPFGDSLERQANILT--------GNYTLV 733 (903)
T ss_pred CCCcchhhcccCCCCcccccCHHHHhccccCcccchhhcCceEEEEecCCccCCCchHHhhhhhhc--------Ccccee
Confidence 7665443 34456799999999999998888999999999999999995 8899875443322111 000000
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.+ ....++ +..++|.+|++++|..||++.+|+.
T Consensus 734 --~L-------~~~~d~--eA~dLI~~ml~~dP~~RPsa~~VL~ 766 (903)
T KOG1027|consen 734 --HL-------EPLPDC--EAKDLISRMLNPDPQLRPSATDVLN 766 (903)
T ss_pred --ee-------ccCchH--HHHHHHHHhcCCCcccCCCHHHHhC
Confidence 00 001122 6779999999999999999999973
No 402
>KOG0664 consensus Nemo-like MAPK-related serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=1e-30 Score=246.16 Aligned_cols=265 Identities=24% Similarity=0.288 Sum_probs=191.0
Q ss_pred cccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccC-----CeeeE
Q 003855 503 FNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNP-----DFKAL 574 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~-----~~~~l 574 (791)
.+-.+.||-|+||+||..... +|+.||.|++..-. -...+.+.+|..++..++|.|++..++...-+ .+.|+
T Consensus 55 i~PDRPIGYGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDILQPph~dfFqEiYV 134 (449)
T KOG0664|consen 55 IQPDRPIGYGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDILQPANPSFFQELYV 134 (449)
T ss_pred CCCCCcccccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHhcCCCCchHHHHHHH
Confidence 344568999999999999864 89999999875432 22346778899999999999999999876543 24567
Q ss_pred EEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 575 VLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
|+|.|. .+|...+-+.. .++...+.-+++||++||.||| +.+|.||||||.|.|++++-..||||||+|+....
T Consensus 135 ~TELmQ-SDLHKIIVSPQ-~Ls~DHvKVFlYQILRGLKYLH----sA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~ 208 (449)
T KOG0664|consen 135 LTELMQ-SDLHKIIVSPQ-ALTPDHVKVFVYQILRGLKYLH----TANILHRDIKPGNLLVNSNCILKICDFGLARTWDQ 208 (449)
T ss_pred HHHHHH-hhhhheeccCC-CCCcchhhhhHHHHHhhhHHHh----hcchhhccCCCccEEeccCceEEecccccccccch
Confidence 888884 37777665443 4788888899999999999999 78999999999999999999999999999997644
Q ss_pred CCCcceeecccccccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchh
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDAN 733 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 733 (791)
. ....++..+.|..|+|||++++ ..|+.+.||||.|||+.|++.++.-|....+- ...+.+.........+.....
T Consensus 209 d-~~~hMTqEVVTQYYRAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~Pi--qQL~lItdLLGTPs~EaMr~A 285 (449)
T KOG0664|consen 209 R-DRLNMTHEVVTQYYRAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPI--EQLQMIIDLLGTPSQEAMKYA 285 (449)
T ss_pred h-hhhhhHHHHHHHHhccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChH--HHHHHHHHHhCCCcHHHHHHH
Confidence 3 3445666788999999998877 56999999999999999999988776542221 111222221111100000000
Q ss_pred hh-------hhH---------HhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHH
Q 003855 734 LV-------REE---------QAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 734 ~~-------~~~---------~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
.. +.. ...........+...+...++..||++|.+..+++..+
T Consensus 286 CEGAk~H~LR~~~k~Ps~~vLYtlsS~~~~~heav~~~~~~l~~d~dkris~~~A~~~~ 344 (449)
T KOG0664|consen 286 CEGAKNHVLRAGLRAPDTQRLYKIASPDDKNHEAVDLLQKLLHFDPDKRISVEEALQHR 344 (449)
T ss_pred hhhhHHHhhccCCCCCCccceeeecCCcccchHHHHHHHHHhCCCCcccccHhhhcccc
Confidence 00 000 00111112224456788899999999999999887654
No 403
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.96 E-value=5.6e-32 Score=294.40 Aligned_cols=384 Identities=26% Similarity=0.289 Sum_probs=304.0
Q ss_pred CCCCCeeecCCCcccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCCEE
Q 003855 12 LQNLQYLVFAENNLSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLVAL 91 (791)
Q Consensus 12 l~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 91 (791)
.-+|+.||+|+|++. ..|..+..+.+|+.|+++.|.|+ ++|..... +.+|++|.|.+|.+. ..|..+..+++|++|
T Consensus 44 ~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~-~~~l~~lnL~~n~l~-~lP~~~~~lknl~~L 119 (1081)
T KOG0618|consen 44 RVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSN-MRNLQYLNLKNNRLQ-SLPASISELKNLQYL 119 (1081)
T ss_pred eeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhh-hhcchhheeccchhh-cCchhHHhhhccccc
Confidence 344999999999997 77999999999999999999999 99988887 899999999999999 799999999999999
Q ss_pred eccCccccccccccccccccccccccccc-cccccCCCc----------cccccccccCCCCCCcEEEccCCCCcccCCh
Q 003855 92 DLGFNSFAGHILNTFGNLRHLSLLSQVMN-NLTTESSSA----------DQWSFLSSLTNCRNLTILSFGSNPLGGILPP 160 (791)
Q Consensus 92 ~L~~N~i~~~~~~~~~~l~~L~~L~l~~n-~l~~~~~~~----------~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 160 (791)
|+|+|++. ..|..+..+..++.+..++| ++..++... -...++.++..+.+ .|+|++|.+. ..
T Consensus 120 dlS~N~f~-~~Pl~i~~lt~~~~~~~s~N~~~~~lg~~~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~~~-~~-- 193 (1081)
T KOG0618|consen 120 DLSFNHFG-PIPLVIEVLTAEEELAASNNEKIQRLGQTSIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNEME-VL-- 193 (1081)
T ss_pred ccchhccC-CCchhHHhhhHHHHHhhhcchhhhhhccccchhhhhhhhhcccchhcchhhhhe--eeecccchhh-hh--
Confidence 99999998 55667777778888888877 222221111 00122333444444 5999999987 22
Q ss_pred hhhhhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCC
Q 003855 161 VIGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKL 240 (791)
Q Consensus 161 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 240 (791)
.......|+.+....|++.... -..++|+.|+.++|.++...+ . ..-.+|+++|+++|+++ .+|++++.+.+
T Consensus 194 -dls~~~~l~~l~c~rn~ls~l~----~~g~~l~~L~a~~n~l~~~~~-~-p~p~nl~~~dis~n~l~-~lp~wi~~~~n 265 (1081)
T KOG0618|consen 194 -DLSNLANLEVLHCERNQLSELE----ISGPSLTALYADHNPLTTLDV-H-PVPLNLQYLDISHNNLS-NLPEWIGACAN 265 (1081)
T ss_pred -hhhhccchhhhhhhhcccceEE----ecCcchheeeeccCcceeecc-c-cccccceeeecchhhhh-cchHHHHhccc
Confidence 1223356899999999988433 234789999999999984332 2 23468999999999999 67799999999
Q ss_pred CceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCccc-cc----------
Q 003855 241 MFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNV-QK---------- 309 (791)
Q Consensus 241 L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~-~~---------- 309 (791)
|+.++..+|+++ .+|..+..+++|+.|.+.+|.+. -+|....+++.|++|+|..|+|.. .|+.+ ..
T Consensus 266 le~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~-lp~~~l~v~~~~l~~ln~ 342 (1081)
T KOG0618|consen 266 LEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPS-LPDNFLAVLNASLNTLNV 342 (1081)
T ss_pred ceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccc-cchHHHhhhhHHHHHHhh
Confidence 999999999997 78899999999999999999998 677788889999999999999974 44322 11
Q ss_pred ---------------CCCCCEEecCCcccCCCCCcchhccccccccccccccCCCCCCcccCCCCCCcEEEccCCccCCC
Q 003855 310 ---------------LKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLSGK 374 (791)
Q Consensus 310 ---------------l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~ 374 (791)
++.|+.|++.+|.+++..-..+.+.++|+.|+|++|++.......+.++..|+.|+||+|+++ .
T Consensus 343 s~n~l~~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSGNkL~-~ 421 (1081)
T KOG0618|consen 343 SSNKLSTLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSGNKLT-T 421 (1081)
T ss_pred hhccccccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccccccCCHHHHhchHHhHHHhcccchhh-h
Confidence 224677888888888766667788888888888888888444445678888888888888888 7
Q ss_pred CchhhhhcccCceEEccCCCCcccCCCCCCCcCCccccccCCcc
Q 003855 375 IPKSLETLSQLKQFNVSHNRLEGEIPVKGSFKNFSVESFFGNYA 418 (791)
Q Consensus 375 ~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~~ 418 (791)
+|..+..++.|++|...+|++.+.| ....++.++++++.-|..
T Consensus 422 Lp~tva~~~~L~tL~ahsN~l~~fP-e~~~l~qL~~lDlS~N~L 464 (1081)
T KOG0618|consen 422 LPDTVANLGRLHTLRAHSNQLLSFP-ELAQLPQLKVLDLSCNNL 464 (1081)
T ss_pred hhHHHHhhhhhHHHhhcCCceeech-hhhhcCcceEEecccchh
Confidence 7788888888888888888888766 666777777777776654
No 404
>KOG1290 consensus Serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.96 E-value=6.4e-28 Score=245.32 Aligned_cols=130 Identities=27% Similarity=0.366 Sum_probs=111.6
Q ss_pred hccccccccCCCcceEEEEEEe-cCCcEEEEEEeehhhhHHHHHHHHHHHHHHhcc-----C---Cccceeeeeec----
Q 003855 501 DEFNECNLLGTGSFGSVYKGTI-SDGTDVAIKIFNLQLERAFRSFDSECEVLRNVR-----H---RNLIKILSSCS---- 567 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~-~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~-----h---~niv~l~~~~~---- 567 (791)
.+|.+.++||.|.|++||.|.. .+.+.||+|+.+.. ....+....|++++++++ | ..||++++.|.
T Consensus 78 gRY~v~rKLGWGHFSTVWLawDtq~~r~VAlKVvKSA-qhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~FkhsGp 156 (590)
T KOG1290|consen 78 GRYHVQRKLGWGHFSTVWLAWDTQNKRYVALKVVKSA-QHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHFKHSGP 156 (590)
T ss_pred ceEEEEEeccccccceeEEEeeccCCeEEEEEEEehh-hHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccceecCC
Confidence 6899999999999999999985 46788999998755 334466788999999983 3 36999999984
Q ss_pred cCCeeeEEEecCCCCCHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEe
Q 003855 568 NPDFKALVLEFMPNGSLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILL 635 (791)
Q Consensus 568 ~~~~~~lv~e~~~~g~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill 635 (791)
.+.+++||+|++ |.+|..+|... -+.++...+.+|++||+.||.|||..| +|+|-||||+|||+
T Consensus 157 NG~HVCMVfEvL-GdnLLklI~~s~YrGlpl~~VK~I~~qvL~GLdYLH~ec---gIIHTDlKPENvLl 221 (590)
T KOG1290|consen 157 NGQHVCMVFEVL-GDNLLKLIKYSNYRGLPLSCVKEICRQVLTGLDYLHREC---GIIHTDLKPENVLL 221 (590)
T ss_pred CCcEEEEEehhh-hhHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHhc---CccccCCCcceeee
Confidence 567999999999 77999999854 345999999999999999999999754 79999999999999
No 405
>cd00180 PKc Catalytic domain of Protein Kinases. Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which
Probab=99.95 E-value=2.3e-27 Score=236.18 Aligned_cols=210 Identities=35% Similarity=0.513 Sum_probs=182.7
Q ss_pred cCCCcceEEEEEEec-CCcEEEEEEeehhhhH-HHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCHHH
Q 003855 509 LGTGSFGSVYKGTIS-DGTDVAIKIFNLQLER-AFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSLEK 586 (791)
Q Consensus 509 ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~ 586 (791)
||+|.+|.||++... +++.+++|++...... ..+.+.+|+..++.+.|++++++++++......++++||+++++|.+
T Consensus 1 l~~g~~~~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~~~~~~~~~~~e~~~~~~l~~ 80 (215)
T cd00180 1 LGEGGFGTVYLARDKKTGKKVAIKIIKKEDSSSLLEELLREIEILKKLNHPNIVKLYGVFEDENHLYLVMEYCEGGSLKD 80 (215)
T ss_pred CCcCCceEEEEEEecCCCcEEEEEEeccccchhHHHHHHHHHHHHHhcCCCCeeeEeeeeecCCeEEEEEecCCCCcHHH
Confidence 689999999999975 4899999998766432 35678899999999999999999999999899999999999999999
Q ss_pred HHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC-CCcEEEeeeccccccCCCCCcceeeccc
Q 003855 587 WLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE-NMAAHVSDFGISKLLGEGEDSVTQTMTM 665 (791)
Q Consensus 587 ~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfgla~~~~~~~~~~~~~~~~ 665 (791)
++......+++..+..++.++++++.||| ..+++|+||+|.||+++. ++.++|+|||.+........ ......
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~--~~~~~~ 154 (215)
T cd00180 81 LLKENEGKLSEDEILRILLQILEGLEYLH----SNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKS--LLKTIV 154 (215)
T ss_pred HHHhccCCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcc--hhhccc
Confidence 99876445899999999999999999999 678999999999999999 89999999999987654321 122244
Q ss_pred ccccccCCCccCCC-CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHH
Q 003855 666 ATIGYMAPEYGSEG-IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAK 744 (791)
Q Consensus 666 g~~~y~aPE~~~~~-~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 744 (791)
+...|++||..... .++.++|+|++|++++++
T Consensus 155 ~~~~~~~pe~~~~~~~~~~~~D~~~lg~~~~~l----------------------------------------------- 187 (215)
T cd00180 155 GTPAYMAPEVLLGKGYYSEKSDIWSLGVILYEL----------------------------------------------- 187 (215)
T ss_pred CCCCccChhHhcccCCCCchhhhHHHHHHHHHH-----------------------------------------------
Confidence 67889999988776 888999999999999999
Q ss_pred HHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 745 MDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 745 ~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
..+.+++.+|++.+|++||++.++++.
T Consensus 188 ----~~~~~~l~~~l~~~p~~R~~~~~l~~~ 214 (215)
T cd00180 188 ----PELKDLIRKMLQKDPEKRPSAKEILEH 214 (215)
T ss_pred ----HHHHHHHHHHhhCCcccCcCHHHHhhC
Confidence 235689999999999999999999864
No 406
>KOG1152 consensus Signal transduction serine/threonine kinase with PAS/PAC sensor domain [Signal transduction mechanisms]
Probab=99.95 E-value=9.6e-29 Score=255.58 Aligned_cols=196 Identities=23% Similarity=0.357 Sum_probs=168.2
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHH-----HHHHHHHHHHHHhcc---CCccceeeeeecc
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERA-----FRSFDSECEVLRNVR---HRNLIKILSSCSN 568 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~-----~~~~~~e~~~l~~l~---h~niv~l~~~~~~ 568 (791)
.+|...+.+|.|+||.|+.|.++ +...|+||.+.++. ..+ ....-.|+.+|..++ |+||++++++|++
T Consensus 561 s~yttlq~lG~GAyGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfFEd 640 (772)
T KOG1152|consen 561 SDYTTLQPLGEGAYGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFFED 640 (772)
T ss_pred ccceeeeeccccccceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhheeec
Confidence 46888999999999999999986 56779999887653 111 123556999999997 9999999999999
Q ss_pred CCeeeEEEecC-CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeec
Q 003855 569 PDFKALVLEFM-PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFG 647 (791)
Q Consensus 569 ~~~~~lv~e~~-~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfg 647 (791)
.+..|++||-. ++-+|.+++..+.. +++.+...|.+||+.|+++|| +.+|||||||-+||.++.+|.+||+|||
T Consensus 641 dd~yyl~te~hg~gIDLFd~IE~kp~-m~E~eAk~IFkQV~agi~hlh----~~~ivhrdikdenvivd~~g~~klidfg 715 (772)
T KOG1152|consen 641 DDYYYLETEVHGEGIDLFDFIEFKPR-MDEPEAKLIFKQVVAGIKHLH----DQGIVHRDIKDENVIVDSNGFVKLIDFG 715 (772)
T ss_pred CCeeEEEecCCCCCcchhhhhhccCc-cchHHHHHHHHHHHhcccccc----ccCceecccccccEEEecCCeEEEeecc
Confidence 99999999985 45699999986554 899999999999999999999 7899999999999999999999999999
Q ss_pred cccccCCCCCcceeecccccccccCCCccCCCCCC-ccccHHhHHHHHHHHHhCCCCCC
Q 003855 648 ISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVS-AKCDVYSYGVLLMETFTRKRPTD 705 (791)
Q Consensus 648 la~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~-~~~Dv~s~G~vl~elltg~~p~~ 705 (791)
.|.....+. ....+||.+|.|||++.+..|- ..-|||++|+++|.++....||.
T Consensus 716 saa~~ksgp----fd~f~gtv~~aapevl~g~~y~gk~qdiwalgillytivykenpyy 770 (772)
T KOG1152|consen 716 SAAYTKSGP----FDVFVGTVDYAAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYY 770 (772)
T ss_pred chhhhcCCC----cceeeeeccccchhhhCCCccCCCcchhhhhhheeeEEEeccCCCc
Confidence 998765443 3345799999999999887764 45899999999999999999974
No 407
>KOG0665 consensus Jun-N-terminal kinase (JNK) [Signal transduction mechanisms]
Probab=99.95 E-value=2.8e-28 Score=235.96 Aligned_cols=259 Identities=24% Similarity=0.280 Sum_probs=193.4
Q ss_pred hhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeecc------CC
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSN------PD 570 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~------~~ 570 (791)
..+|.....+|.|.- .|..|... .++.||+|...... ....+...+|..++..+.|+||++++.++.- -.
T Consensus 16 ~~Ry~nL~p~~~g~~-~v~~a~D~v~~~~v~ikk~~~pf~n~~~akra~rel~l~~~v~~~nii~l~n~ftP~~~l~~~~ 94 (369)
T KOG0665|consen 16 PKRYVNLKPIGSGAQ-IVVAAFDQVLGRPVAIKKLSRPFQNQTHAKRAYRELKLMKCVNHKNIISLLNVFTPQKTLEEFQ 94 (369)
T ss_pred eeeeeeecccCCCCc-eEEecchhhccCceehhhhcCccccCccchhhhhhhhhhhhhcccceeeeeeccCccccHHHHH
Confidence 356777788999988 66666543 68899999764432 3345666789999999999999999998842 34
Q ss_pred eeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccc
Q 003855 571 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISK 650 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 650 (791)
..|+|||+| .++|.+.+.-. ++-.++..|.+|++.|+.||| +.+|+||||||+||++..+..+||.|||+|+
T Consensus 95 e~y~v~e~m-~~nl~~vi~~e---lDH~tis~i~yq~~~~ik~lh----s~~IihRdLkPsnivv~~~~~lKi~dfg~ar 166 (369)
T KOG0665|consen 95 EVYLVMELM-DANLCQVILME---LDHETISYILYQMLCGIKHLH----SAGIIHRDLKPSNIVVNSDCTLKILDFGLAR 166 (369)
T ss_pred hHHHHHHhh-hhHHHHHHHHh---cchHHHHHHHHHHHHHHHHHH----hcceeecccCcccceecchhheeeccchhhc
Confidence 678999999 55999988832 677889999999999999999 7899999999999999999999999999998
Q ss_pred ccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCC-hhhh
Q 003855 651 LLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHG-LTEV 729 (791)
Q Consensus 651 ~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~-~~~~ 729 (791)
.-... ...+..+.|..|.|||++.+..+.+.+||||.||++.||++|+.-|. ++..+.+|.+....-+ ..+-
T Consensus 167 ~e~~~---~~mtpyVvtRyyrapevil~~~~ke~vdiwSvGci~gEli~~~Vlf~----g~d~idQ~~ki~~~lgtpd~~ 239 (369)
T KOG0665|consen 167 TEDTD---FMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELILGTVLFP----GKDHIDQWNKIIEQLGTPDPS 239 (369)
T ss_pred ccCcc---cccCchhheeeccCchheeccCCcccchhhhhhhHHHHHhhceEEec----CchHHHHHHHHHHHhcCCCHH
Confidence 64332 34455678999999999888889999999999999999999998765 4556666654321111 0000
Q ss_pred cchhhh----------hhHH------h-----hH----HHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 730 VDANLV----------REEQ------A-----FS----AKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 730 ~d~~~~----------~~~~------~-----~~----~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+...+. .++. . ++ ...--...+.+++.+||-.+|++|.++.++++
T Consensus 240 F~~qL~~~~r~yv~~~~~y~~~~f~~~fpD~~f~~~~e~~~~~~~~ardll~~MLvi~pe~Risv~daL~ 309 (369)
T KOG0665|consen 240 FMKQLQPTVRNYVENRPQYQAISFSELFPDSLFPVVLEGSKLDCSLARDLLSKMLVIDPEKRISVDDALR 309 (369)
T ss_pred HHHHhhHHHHHHhhcChHhhccchhhhCCcccccccccCCccchHHHHHHHHHhhccChhhcccHHHHhc
Confidence 000000 0000 0 00 00011245778999999999999999999975
No 408
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.95 E-value=1.5e-29 Score=250.75 Aligned_cols=364 Identities=24% Similarity=0.243 Sum_probs=257.7
Q ss_pred CCCeeecCCCcccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccC-CcceecCCccCcCCCCCCEEe
Q 003855 14 NLQYLVFAENNLSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAA-NNLTGIIPHSITNATKLVALD 92 (791)
Q Consensus 14 ~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~ 92 (791)
.-.+++|..|+|+.++|.+|..+.+||.||||+|.|+ .|-+..|.++++|..|-+.+ |+|+.+..+.|++|..|+.|.
T Consensus 68 ~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is-~I~p~AF~GL~~l~~Lvlyg~NkI~~l~k~~F~gL~slqrLl 146 (498)
T KOG4237|consen 68 ETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNIS-FIAPDAFKGLASLLSLVLYGNNKITDLPKGAFGGLSSLQRLL 146 (498)
T ss_pred cceEEEeccCCcccCChhhccchhhhceecccccchh-hcChHhhhhhHhhhHHHhhcCCchhhhhhhHhhhHHHHHHHh
Confidence 5678999999999999999999999999999999998 77777778899988877766 999988888999999999999
Q ss_pred ccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcc------------cCC-
Q 003855 93 LGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGG------------ILP- 159 (791)
Q Consensus 93 L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~------------~~~- 159 (791)
+.-|++..+..++|..|++|..|.+.+|.+..+.... |..+..++.+.+..|.+.. ..|
T Consensus 147 lNan~i~Cir~~al~dL~~l~lLslyDn~~q~i~~~t--------f~~l~~i~tlhlA~np~icdCnL~wla~~~a~~~i 218 (498)
T KOG4237|consen 147 LNANHINCIRQDALRDLPSLSLLSLYDNKIQSICKGT--------FQGLAAIKTLHLAQNPFICDCNLPWLADDLAMNPI 218 (498)
T ss_pred cChhhhcchhHHHHHHhhhcchhcccchhhhhhcccc--------ccchhccchHhhhcCccccccccchhhhHHhhchh
Confidence 9999999999999999999999999999999887655 7788888888888777221 111
Q ss_pred -----------------------hhhhhhhhhhhhhhcccccccccCCc-cccCCCCCCEEEccCCccccccCccccCCC
Q 003855 160 -----------------------PVIGNFSASLQKFYAYECKLKGNIPQ-EIGNLSGLTLLSLHSNDLNGTISPTMGRLK 215 (791)
Q Consensus 160 -----------------------~~~~~~~~~L~~L~l~~n~l~~~~~~-~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~ 215 (791)
..+.....++..-....+....+-|. .|..+++|+.|+|++|.|+.+.+.+|.++.
T Consensus 219 etsgarc~~p~rl~~~Ri~q~~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a 298 (498)
T KOG4237|consen 219 ETSGARCVSPYRLYYKRINQEDARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAA 298 (498)
T ss_pred hcccceecchHHHHHHHhcccchhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchh
Confidence 11111111222223344444444443 578888888888888888888888888888
Q ss_pred CCCEEEcccccCcccCCccccccCCCceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCC-----CCCccc-------
Q 003855 216 RLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTS-----SIPSSL------- 283 (791)
Q Consensus 216 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~-----~~~~~~------- 283 (791)
.+++|.|..|+|..+....|.++..|+.|+|++|+|+...|.+|..+.+|.+|+|-.|.+.- .+.+++
T Consensus 299 ~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~ 378 (498)
T KOG4237|consen 299 ELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVG 378 (498)
T ss_pred hhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCC
Confidence 88888888888887667778888888888888888887778888888888888888777641 001111
Q ss_pred ----cCCCCCCeEEccCCcCcc---cCCccccc---------CCCCC-EEecCCcccCCCCCcchhcccccccccccccc
Q 003855 284 ----WSLEYILDINLSSNSLND---SLPSNVQK---------LKVLT-VLDLSRNQLSGDIPSTIGALKDLETLSLARNQ 346 (791)
Q Consensus 284 ----~~l~~L~~L~l~~N~i~~---~~~~~~~~---------l~~L~-~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 346 (791)
.....++.+.++.+.+.+ ..|++.+. ++-+. ....|++.++ .+|..+ -....+|++.+|.
T Consensus 379 ~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~~~~~s~~cP~~c~c~~tVvRcSnk~lk-~lp~~i--P~d~telyl~gn~ 455 (498)
T KOG4237|consen 379 NPRCQSPGFVRQIPISDVAFGDFRCGGPEELGCLTSSPCPPPCTCLDTVVRCSNKLLK-LLPRGI--PVDVTELYLDGNA 455 (498)
T ss_pred CCCCCCCchhccccchhccccccccCCccccCCCCCCCCCCCcchhhhhHhhcccchh-hcCCCC--CchhHHHhcccch
Confidence 112244555555554422 12221111 11122 2223333333 444322 2345677777887
Q ss_pred CCCCCCcccCCCCCCcEEEccCCccCCCCchhhhhcccCceEEccCC
Q 003855 347 FQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQLKQFNVSHN 393 (791)
Q Consensus 347 l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N 393 (791)
++ .+|.. .+.+| .+|+++|+|+..-...|.++.+|.+|-+++|
T Consensus 456 ~~-~vp~~--~~~~l-~~dls~n~i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 456 IT-SVPDE--LLRSL-LLDLSNNRISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred hc-ccCHH--HHhhh-hcccccCceehhhcccccchhhhheeEEecC
Confidence 77 66665 55666 7788888877666667777777777777765
No 409
>KOG0576 consensus Mitogen-activated protein kinase kinase kinase kinase (MAP4K), germinal center kinase family [Signal transduction mechanisms]
Probab=99.95 E-value=3.6e-29 Score=263.03 Aligned_cols=252 Identities=23% Similarity=0.333 Sum_probs=203.9
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
++|+....+|.|+||.|||++.. .++..|||+++-.....+....+|+-+++..+||||+.++|.+...+..++.||||
T Consensus 15 ddyellqrvgsgTygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsylr~dklwicMEyc 94 (829)
T KOG0576|consen 15 DDYELLQRVGSGTYGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSYLRRDKLWICMEYC 94 (829)
T ss_pred cchhheeeecCCcccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhhhhhcCcEEEEEec
Confidence 67888999999999999999964 78999999999888888888999999999999999999999999999999999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
.+|+|++.-+- ...+++.++..+++...+|++||| +.+-+|||||-.||++++.|.+|++|||.+..+.... .
T Consensus 95 gggslQdiy~~-TgplselqiayvcRetl~gl~ylh----s~gk~hRdiKGanilltd~gDvklaDfgvsaqitati--~ 167 (829)
T KOG0576|consen 95 GGGSLQDIYHV-TGPLSELQIAYVCRETLQGLKYLH----SQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATI--A 167 (829)
T ss_pred CCCcccceeee-cccchhHHHHHHHhhhhccchhhh----cCCcccccccccceeecccCceeecccCchhhhhhhh--h
Confidence 99999985443 345889999999999999999999 7889999999999999999999999999997765432 2
Q ss_pred eeecccccccccCCCc---cCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 660 TQTMTMATIGYMAPEY---GSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~---~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
......||+.|||||+ ...+.|..++|||+.|+...|+-.-++|.....+... ..... . ...++.-..
T Consensus 168 KrksfiGtpywmapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~----l~LmT-k----S~~qpp~lk 238 (829)
T KOG0576|consen 168 KRKSFIGTPYWMAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRA----LFLMT-K----SGFQPPTLK 238 (829)
T ss_pred hhhcccCCccccchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHH----HHHhh-c----cCCCCCccc
Confidence 3344679999999995 4567899999999999999999998888544322211 11100 0 001111111
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
........+.++++.|+..+|++||++...++
T Consensus 239 ------Dk~kws~~fh~fvK~altknpKkRptaeklL~ 270 (829)
T KOG0576|consen 239 ------DKTKWSEFFHNFVKGALTKNPKKRPTAEKLLQ 270 (829)
T ss_pred ------CCccchHHHHHHHHHHhcCCCccCCChhhhee
Confidence 11234566889999999999999999987765
No 410
>smart00221 STYKc Protein kinase; unclassified specificity. Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.
Probab=99.95 E-value=1.2e-26 Score=233.74 Aligned_cols=199 Identities=29% Similarity=0.431 Sum_probs=172.7
Q ss_pred cccccccCCCcceEEEEEEecC-CcEEEEEEeehhhhH-HHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 503 FNECNLLGTGSFGSVYKGTISD-GTDVAIKIFNLQLER-AFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~-~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
|...+.||+|++|.||+|...+ ++.+|+|.+...... ..+.+.+|++.+++++|+|++++++++......++++||++
T Consensus 1 ~~~~~~i~~g~~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~~~~~~~~~v~e~~~ 80 (225)
T smart00221 1 YELGKKLGEGAFGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVFEDPEPLYLVMEYCE 80 (225)
T ss_pred CceeeEeecCCCeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeeeecCCceEEEEeccC
Confidence 4567899999999999999764 899999998766544 56788999999999999999999999998899999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+++|.+++......+++..+..++.+++.++.||| ..+++|+|++|+||+++.++.++|+|||.+......... .
T Consensus 81 ~~~L~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lh----~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~-~ 155 (225)
T smart00221 81 GGDLFDYLRKKGGKLSEEEARFYLRQILEALEYLH----SLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAA-L 155 (225)
T ss_pred CCCHHHHHHhcccCCCHHHHHHHHHHHHHHHHHHH----hCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccc-c
Confidence 99999999865543789999999999999999999 668999999999999999999999999999877543210 1
Q ss_pred eecccccccccCCCcc-CCCCCCccccHHhHHHHHHHHHhCCCCCCc
Q 003855 661 QTMTMATIGYMAPEYG-SEGIVSAKCDVYSYGVLLMETFTRKRPTDE 706 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~-~~~~~~~~~Dv~s~G~vl~elltg~~p~~~ 706 (791)
.....++..|++||.. ....++.++|||+||++++||++|+.||+.
T Consensus 156 ~~~~~~~~~~~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~ 202 (225)
T smart00221 156 LKTVKGTPFYLAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSG 202 (225)
T ss_pred ccceeccCCcCCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccc
Confidence 1223567889999988 667788899999999999999999999965
No 411
>KOG0670 consensus U4/U6-associated splicing factor PRP4 [RNA processing and modification]
Probab=99.94 E-value=1.6e-27 Score=243.42 Aligned_cols=266 Identities=23% Similarity=0.261 Sum_probs=201.8
Q ss_pred HHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhcc------CCccceeeeeeccC
Q 003855 497 QRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVR------HRNLIKILSSCSNP 569 (791)
Q Consensus 497 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~------h~niv~l~~~~~~~ 569 (791)
+....+|.+....|+|-|++|..|... .|..||||++.... -..+.=..|+++|+++. .-+.++++-.|...
T Consensus 428 E~LD~RY~V~~~~GkGvFs~Vvra~D~~r~~~vAiKIIRnNE-~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F~hk 506 (752)
T KOG0670|consen 428 ELLDSRYEVQGYTGKGVFSTVVRARDQARGQEVAIKIIRNNE-VMHKTGLKELEILKKLNDADPEDKFHCLRLFRHFKHK 506 (752)
T ss_pred hhhcceeEEEeccccceeeeeeeccccCCCCeeEEEEeecch-HHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHhhhc
Confidence 344578999999999999999999864 57899999997653 33455577999999994 35899999999999
Q ss_pred CeeeEEEecCCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC-CcEEEeee
Q 003855 570 DFKALVLEFMPNGSLEKWLYSHN--YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN-MAAHVSDF 646 (791)
Q Consensus 570 ~~~~lv~e~~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~-~~~kl~Df 646 (791)
.++|||||-+ .-+|.+.|.+-+ ..+....+..++.|+.-||.+|. ..+|+|.||||.||||++. ...|||||
T Consensus 507 nHLClVFE~L-slNLRevLKKyG~nvGL~ikaVRsYaqQLflALklLK----~c~vlHaDIKPDNiLVNE~k~iLKLCDf 581 (752)
T KOG0670|consen 507 NHLCLVFEPL-SLNLREVLKKYGRNVGLHIKAVRSYAQQLFLALKLLK----KCGVLHADIKPDNILVNESKNILKLCDF 581 (752)
T ss_pred ceeEEEehhh-hchHHHHHHHhCcccceeehHHHHHHHHHHHHHHHHH----hcCeeecccCccceEeccCcceeeeccC
Confidence 9999999988 459999998543 35788899999999999999998 5689999999999999964 56899999
Q ss_pred ccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHH---------
Q 003855 647 GISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRW--------- 717 (791)
Q Consensus 647 gla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~--------- 717 (791)
|.|......+.. ....+..|.|||++.+-.|+...|+||.||++||+.||+.-|++.....+ .++
T Consensus 582 GSA~~~~eneit----PYLVSRFYRaPEIiLG~~yd~~iD~WSvgctLYElYtGkIlFpG~TNN~M--Lrl~me~KGk~p 655 (752)
T KOG0670|consen 582 GSASFASENEIT----PYLVSRFYRAPEIILGLPYDYPIDTWSVGCTLYELYTGKILFPGRTNNQM--LRLFMELKGKFP 655 (752)
T ss_pred cccccccccccc----HHHHHHhccCcceeecCcccCCccceeeceeeEEeeccceecCCCCcHHH--HHHHHHhcCCCc
Confidence 999877654432 22356789999999999999999999999999999999988876433221 111
Q ss_pred ---------HHHhcCCCh---h---------------hhcch------hhhhhHHhhHHHHHHHHHHHHHHhhccccCCC
Q 003855 718 ---------VKESLPHGL---T---------------EVVDA------NLVREEQAFSAKMDCILSIMDLALDCCIESPD 764 (791)
Q Consensus 718 ---------~~~~~~~~~---~---------------~~~d~------~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~ 764 (791)
...++-..+ . ..+.+ .+................+.+|+..|+..||+
T Consensus 656 ~KmlRKgqF~dqHFD~d~nf~~~e~D~vT~r~~~~vm~~vkPtkdl~s~l~~~q~~~deq~~~~~~~rdLLdkml~LdP~ 735 (752)
T KOG0670|consen 656 NKMLRKGQFKDQHFDQDLNFLYIEVDKVTEREKRTVMVNVKPTKDLGSELIAVQRLPDEQPKIVQQLRDLLDKMLILDPE 735 (752)
T ss_pred HHHhhhcchhhhhcccccceEEEeccccccceeEEEecccCcchhHHHHHhccCCCCchhHHHHHHHHHHHHHHhccChh
Confidence 111111110 0 00000 11111011122234567789999999999999
Q ss_pred CCCCHHHHHH
Q 003855 765 MRINVTDAAA 774 (791)
Q Consensus 765 ~RPt~~ev~~ 774 (791)
+|.|..++++
T Consensus 736 KRit~nqAL~ 745 (752)
T KOG0670|consen 736 KRITVNQALK 745 (752)
T ss_pred hcCCHHHHhc
Confidence 9999999875
No 412
>KOG1345 consensus Serine/threonine kinase [Signal transduction mechanisms]
Probab=99.94 E-value=2.7e-27 Score=223.36 Aligned_cols=256 Identities=20% Similarity=0.267 Sum_probs=190.2
Q ss_pred HhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeee-eccCCeeeEE
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSS-CSNPDFKALV 575 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~-~~~~~~~~lv 575 (791)
..+.|.+.+.+|+|.||.+-.++++ ..+.+++|.+..... ..++|.+|...--.+ .|.||+.-++. |+..+...++
T Consensus 22 l~d~y~I~k~lgeG~FgkIlL~eHr~s~t~ivlKavp~p~t-t~~dF~rEfhY~~~Ls~H~hIi~tY~vaFqt~d~YvF~ 100 (378)
T KOG1345|consen 22 LEDVYTINKQLGEGRFGKILLAEHRQSKTRIVLKAVPRPQT-TQADFVREFHYSFFLSPHQHIIDTYEVAFQTSDAYVFV 100 (378)
T ss_pred hhhhhhHHHHhcccceeeEEeeeccCCceEEEeeccCcchh-hHHHHHHHhccceeeccchhhhHHHHHHhhcCceEEEe
Confidence 3477999999999999999999976 678899998865533 246777776655455 59999988764 5677788899
Q ss_pred EecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC--CCCcEEEeeeccccccC
Q 003855 576 LEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD--ENMAAHVSDFGISKLLG 653 (791)
Q Consensus 576 ~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~--~~~~~kl~Dfgla~~~~ 653 (791)
+||++.|+|.+-+...+ +.+....+++.|++.|+.||| ++.+||||||.+|||+- +...+|+||||+.+..+
T Consensus 101 qE~aP~gdL~snv~~~G--igE~~~K~v~~ql~SAi~fMH----sknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g 174 (378)
T KOG1345|consen 101 QEFAPRGDLRSNVEAAG--IGEANTKKVFAQLLSAIEFMH----SKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVG 174 (378)
T ss_pred eccCccchhhhhcCccc--ccHHHHHHHHHHHHHHHHHhh----ccchhhcccccceEEEecCCccEEEeeecccccccC
Confidence 99999999999887654 777888899999999999999 78999999999999994 44579999999998654
Q ss_pred CCCCcceeecccccccccCCCccCCC-----CCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhh
Q 003855 654 EGEDSVTQTMTMATIGYMAPEYGSEG-----IVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTE 728 (791)
Q Consensus 654 ~~~~~~~~~~~~g~~~y~aPE~~~~~-----~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (791)
..... ..-+..|.|||..... ...+.+|||.||++++.++||+.||.........+.+|.+=......
T Consensus 175 ~tV~~-----~~~~~~y~~pe~~~~~~ne~~~~~ps~D~WqfGIi~f~cltG~~PWQka~~~d~~Y~~~~~w~~rk~~-- 247 (378)
T KOG1345|consen 175 TTVKY-----LEYVNNYHAPELCDTVVNEKLVVNPSTDIWQFGIIFFYCLTGKFPWQKASIMDKPYWEWEQWLKRKNP-- 247 (378)
T ss_pred ceehh-----hhhhcccCCcHHHhhccccceEecccccchheeeeeeeeecCCCcchhhhccCchHHHHHHHhcccCc--
Confidence 32221 1235569999964332 25668999999999999999999998655555555555331111110
Q ss_pred hcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHH
Q 003855 729 VVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKK 778 (791)
Q Consensus 729 ~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~ 778 (791)
...... ...++.++.+.++-+..+|++|--..++.++...
T Consensus 248 ----~~P~~F------~~fs~~a~r~Fkk~lt~~~~drcki~~~kk~rk~ 287 (378)
T KOG1345|consen 248 ----ALPKKF------NPFSEKALRLFKKSLTPRFKDRCKIWTAKKMRKC 287 (378)
T ss_pred ----cCchhh------cccCHHHHHHHHHhcCCcccccchhHHHHHHHHH
Confidence 111111 1233556788889999999999777777666544
No 413
>KOG1167 consensus Serine/threonine protein kinase of the CDC7 subfamily involved in DNA synthesis, repair and recombination [Replication, recombination and repair]
Probab=99.94 E-value=6.3e-27 Score=235.56 Aligned_cols=268 Identities=25% Similarity=0.309 Sum_probs=197.1
Q ss_pred HHHhhccccccccCCCcceEEEEEEec----CCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCe
Q 003855 497 QRATDEFNECNLLGTGSFGSVYKGTIS----DGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDF 571 (791)
Q Consensus 497 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~----~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~ 571 (791)
....+.|..+++||+|.|++||+|... .++.||+|.+...... ..+..|++++..+ -+.||+++.+++...+.
T Consensus 32 p~~~~~~~~v~kigeGsFssv~~a~~~~~~~~~~~valk~i~~ts~p--~ri~~El~~L~~~gG~~ni~~~~~~~rnnd~ 109 (418)
T KOG1167|consen 32 PFISNAYKVVNKIGEGSFSSVYKATDIEQDTKRRYVALKAIYRTSSP--SRILNELEMLYRLGGSDNIIKLNGCFRNNDQ 109 (418)
T ss_pred hhhhhhhhhhccccccchhhhhhhhHhhhccccceEeeeecccccCc--hHHHHHHHHHHHhccchhhhcchhhhccCCe
Confidence 344577999999999999999999853 4678999988765433 4578899999999 59999999999999999
Q ss_pred eeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC-CCcEEEeeecccc
Q 003855 572 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE-NMAAHVSDFGISK 650 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~-~~~~kl~Dfgla~ 650 (791)
..+|+||++..+..++... ++...+..+++.+..||.|+| ..|||||||||+|++.+. -+.-.|.|||+|.
T Consensus 110 v~ivlp~~~H~~f~~l~~~----l~~~~i~~Yl~~ll~Al~~~h----~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~ 181 (418)
T KOG1167|consen 110 VAIVLPYFEHDRFRDLYRS----LSLAEIRWYLRNLLKALAHLH----KNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQ 181 (418)
T ss_pred eEEEecccCccCHHHHHhc----CCHHHHHHHHHHHHHHhhhhh----ccCccccCCCccccccccccCCceEEechhHH
Confidence 9999999999999988875 567888999999999999999 789999999999999984 5678999999997
Q ss_pred ccCCC---------------C---------------------------CcceeecccccccccCCCccCC-CCCCccccH
Q 003855 651 LLGEG---------------E---------------------------DSVTQTMTMATIGYMAPEYGSE-GIVSAKCDV 687 (791)
Q Consensus 651 ~~~~~---------------~---------------------------~~~~~~~~~g~~~y~aPE~~~~-~~~~~~~Dv 687 (791)
.+... . ........+||+||+|||++.. ...++++||
T Consensus 182 ~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~~p~g~~~~~~~~r~~~~anrAGT~GfRaPEvL~k~~~QttaiDi 261 (418)
T KOG1167|consen 182 RYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVATASKPAGYYRRCNDGRPSERANRAGTPGFRAPEVLFRCPRQTTAIDI 261 (418)
T ss_pred HHHhhhhhhhhhhhhcccCCccccCcccccccccccCCCCceeccCCCccceecccCCCCCCCchHHHhhccCcCCccce
Confidence 21100 0 0001223479999999998755 567889999
Q ss_pred HhHHHHHHHHHhCCCCCCccccCcchHHHHHHHh----------cCCC--hh---------------hhcc-hhhhhhHH
Q 003855 688 YSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKES----------LPHG--LT---------------EVVD-ANLVREEQ 739 (791)
Q Consensus 688 ~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~----------~~~~--~~---------------~~~d-~~~~~~~~ 739 (791)
||.|||++.+++++.||-.....-..+...+.-. .+.. +. +-++ ..+.....
T Consensus 262 ws~GVI~Lslls~~~PFf~a~dd~~al~ei~tifG~~~mrk~A~l~g~~~l~~ksn~~~~~e~~~~f~s~~~~~~~~~~q 341 (418)
T KOG1167|consen 262 WSAGVILLSLLSRRYPFFKAKDDADALAEIATIFGSAEMRKCAALPGRILLWQKSNIPTIPELRVNFETLHIESIYKSRQ 341 (418)
T ss_pred eeccceeehhhccccccccCccccchHHHHHHHhChHHHHHHhhcCCceeeeccccccccHHHHhchhccChhhcccccc
Confidence 9999999999999999854333322222221100 0000 00 0010 00110000
Q ss_pred ----hhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 740 ----AFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 740 ----~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
........+..+++++.+|+..||.+|.|++|+++
T Consensus 342 ~n~~~~~~~d~~~~~~~dlLdk~le~np~kRitAEeALk 380 (418)
T KOG1167|consen 342 PNTEREIGSDVFPALLLDLLDKCLELNPQKRITAEDALK 380 (418)
T ss_pred cceeeccccccccHHHHHHHHHHccCChhhcccHHHHhc
Confidence 00111223447899999999999999999999986
No 414
>smart00750 KIND kinase non-catalytic C-lobe domain. It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features
Probab=99.93 E-value=2.3e-25 Score=215.13 Aligned_cols=170 Identities=21% Similarity=0.167 Sum_probs=131.7
Q ss_pred CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCccee
Q 003855 582 GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQ 661 (791)
Q Consensus 582 g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~ 661 (791)
|+|.++++..+..+++.++..++.|+++||.||| +.+ ||+||+++.++.+|+ ||.++......
T Consensus 1 GsL~~~l~~~~~~l~~~~~~~i~~qi~~~L~~lH----~~~------kp~Nil~~~~~~~~~--fG~~~~~~~~~----- 63 (176)
T smart00750 1 VSLADILEVRGRPLNEEEIWAVCLQCLRALRELH----RQA------KSGNILLTWDGLLKL--DGSVAFKTPEQ----- 63 (176)
T ss_pred CcHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHH----hcC------CcccEeEcCccceee--ccceEeecccc-----
Confidence 7999999876667999999999999999999999 444 999999999999999 99998754321
Q ss_pred ecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhh
Q 003855 662 TMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAF 741 (791)
Q Consensus 662 ~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~ 741 (791)
..|++.|+|||++.+..++.++|||||||++|||+||+.||.........+..+............
T Consensus 64 --~~g~~~y~aPE~~~~~~~~~~~DiwSlG~il~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~------------ 129 (176)
T smart00750 64 --SRVDPYFMAPEVIQGQSYTEKADIYSLGITLYEALDYELPYNEERELSAILEILLNGMPADDPRDR------------ 129 (176)
T ss_pred --CCCcccccChHHhcCCCCcchhhHHHHHHHHHHHHhCCCCccccchhcHHHHHHHHHhccCCcccc------------
Confidence 257899999999999999999999999999999999999997543333333333322211110000
Q ss_pred HHHHHHH--HHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 742 SAKMDCI--LSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 742 ~~~~~~~--~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
....... .++.+++.+||+.+|++||++.|+++.+..+...
T Consensus 130 ~~~~~~~~~~~~~~~i~~cl~~~p~~Rp~~~~ll~~~~~~~~~ 172 (176)
T smart00750 130 SNLESVSAARSFADFMRVCASRLPQRREAANHYLAHCRALFAE 172 (176)
T ss_pred ccHHHHHhhhhHHHHHHHHHhcccccccCHHHHHHHHHHHHHH
Confidence 0011122 2588999999999999999999999998877544
No 415
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.93 E-value=3.2e-28 Score=241.37 Aligned_cols=329 Identities=21% Similarity=0.240 Sum_probs=250.3
Q ss_pred cEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCCEEeccCcccccccccccccccccccccccc
Q 003855 40 RILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLVALDLGFNSFAGHILNTFGNLRHLSLLSQVM 119 (791)
Q Consensus 40 ~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~ 119 (791)
-..+.++-.++ ++|..+ .+.-..++|..|+|+.++|++|+.+++|++||||+|.|+.+.+++|.+|++|..|-+.+
T Consensus 49 ~~VdCr~~GL~-eVP~~L---P~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg 124 (498)
T KOG4237|consen 49 GIVDCRGKGLT-EVPANL---PPETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYG 124 (498)
T ss_pred ceEEccCCCcc-cCcccC---CCcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhc
Confidence 45778888888 999875 46889999999999999999999999999999999999999999999999988886666
Q ss_pred -ccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChhhhhhhhhhhhhhcccccccccCCccccCCCCCCEEEc
Q 003855 120 -NNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPVIGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSL 198 (791)
Q Consensus 120 -n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L 198 (791)
|+|+.++.++ |.+|..|+.|.+.-|++.. +..+.|..+++|..|.+
T Consensus 125 ~NkI~~l~k~~--------F~gL~slqrLllNan~i~C-------------------------ir~~al~dL~~l~lLsl 171 (498)
T KOG4237|consen 125 NNKITDLPKGA--------FGGLSSLQRLLLNANHINC-------------------------IRQDALRDLPSLSLLSL 171 (498)
T ss_pred CCchhhhhhhH--------hhhHHHHHHHhcChhhhcc-------------------------hhHHHHHHhhhcchhcc
Confidence 8888877665 6666666666666666653 34456777888888888
Q ss_pred cCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCC
Q 003855 199 HSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSS 278 (791)
Q Consensus 199 ~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~ 278 (791)
.+|.+..+.-..|..+..++.+.+..|.+- ..++++.+... +. ..|..+++.+......+.++++..+
T Consensus 172 yDn~~q~i~~~tf~~l~~i~tlhlA~np~i-----cdCnL~wla~~-~a------~~~ietsgarc~~p~rl~~~Ri~q~ 239 (498)
T KOG4237|consen 172 YDNKIQSICKGTFQGLAAIKTLHLAQNPFI-----CDCNLPWLADD-LA------MNPIETSGARCVSPYRLYYKRINQE 239 (498)
T ss_pred cchhhhhhccccccchhccchHhhhcCccc-----cccccchhhhH-Hh------hchhhcccceecchHHHHHHHhccc
Confidence 888888555558888888888888888743 13334333211 11 2334455666666667777777765
Q ss_pred CCccccCC-CCCCeEEccCCcCcccCC-cccccCCCCCEEecCCcccCCCCCcchhccccccccccccccCCCCCCcccC
Q 003855 279 IPSSLWSL-EYILDINLSSNSLNDSLP-SNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQGPIPESVG 356 (791)
Q Consensus 279 ~~~~~~~l-~~L~~L~l~~N~i~~~~~-~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 356 (791)
.+..|... ..+..-..+.+...++.| ..|..+++|+.|+|++|+|+++-+.+|.++..+++|+|..|+|...-...|.
T Consensus 240 ~a~kf~c~~esl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~ 319 (498)
T KOG4237|consen 240 DARKFLCSLESLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQ 319 (498)
T ss_pred chhhhhhhHHhHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhh
Confidence 55544432 222222222332333333 4688999999999999999988889999999999999999999876677889
Q ss_pred CCCCCcEEEccCCccCCCCchhhhhcccCceEEccCCCCcccCCCCCCCcCCccccccCCc
Q 003855 357 SLISLESLDLSGNNLSGKIPKSLETLSQLKQFNVSHNRLEGEIPVKGSFKNFSVESFFGNY 417 (791)
Q Consensus 357 ~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~~~~~~~l~~~~~~~n~ 417 (791)
++..|+.|+|.+|+|+..-|.+|..+.+|.+|+|-.|++.|.+...+.-++++..+..||+
T Consensus 320 ~ls~L~tL~L~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~ 380 (498)
T KOG4237|consen 320 GLSGLKTLSLYDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNP 380 (498)
T ss_pred ccccceeeeecCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCC
Confidence 9999999999999999999999999999999999999999888766555566655544443
No 416
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.93 E-value=1e-24 Score=266.57 Aligned_cols=339 Identities=20% Similarity=0.269 Sum_probs=186.4
Q ss_pred CccccCCCCCcEEeCCCCc------CcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCCEEeccCcccccccc
Q 003855 30 PPTIFNISTMRILTLEGNQ------LSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLVALDLGFNSFAGHIL 103 (791)
Q Consensus 30 ~~~~~~l~~L~~L~L~~n~------l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~ 103 (791)
+.+|.++.+|+.|.+.++. +...+|..+....++|+.|.+.+|.++ .+|..| ...+|+.|+|++|++.. .+
T Consensus 551 ~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~-L~ 627 (1153)
T PLN03210 551 ENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEK-LW 627 (1153)
T ss_pred HHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccccc-cc
Confidence 3445555555555554332 122344444443344555555555555 344444 24555555555555542 23
Q ss_pred cccccccccccccccccc-ccccCCCccccccccccCCCCCCcEEEccCCCCcccCChhhhhhhhhhhhhhccccccccc
Q 003855 104 NTFGNLRHLSLLSQVMNN-LTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPVIGNFSASLQKFYAYECKLKGN 182 (791)
Q Consensus 104 ~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~ 182 (791)
..+..+++|+.|+++++. +..++ .+..+++|+.|+|++|.....+|..+..+ .+|+.|++++|...+.
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip----------~ls~l~~Le~L~L~~c~~L~~lp~si~~L-~~L~~L~L~~c~~L~~ 696 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIP----------DLSMATNLETLKLSDCSSLVELPSSIQYL-NKLEDLDMSRCENLEI 696 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCC----------ccccCCcccEEEecCCCCccccchhhhcc-CCCCEEeCCCCCCcCc
Confidence 344555555555555442 22221 24455566666665554444444444433 2355555555443334
Q ss_pred CCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecCCccC-------CCC
Q 003855 183 IPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLS-------GHI 255 (791)
Q Consensus 183 ~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~-------~~~ 255 (791)
+|..+ ++++|+.|+|++|......|.. ..+|++|+|++|.++ .+|..+ .+++|+.|++.++... ...
T Consensus 697 Lp~~i-~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~ 770 (1153)
T PLN03210 697 LPTGI-NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLT 770 (1153)
T ss_pred cCCcC-CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccc
Confidence 45444 5666677777666544333322 346666777777665 444433 4566666666653321 111
Q ss_pred CccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccc
Q 003855 256 PPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALK 335 (791)
Q Consensus 256 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~ 335 (791)
+..+...++|+.|+|++|.....+|..+.++++|+.|++++|...+.+|..+ .+++|+.|++++|.....+|.. ..
T Consensus 771 ~~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~ 846 (1153)
T PLN03210 771 PLMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---ST 846 (1153)
T ss_pred hhhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---cc
Confidence 2222234567777777776655667777777777777777664434555544 5677777777776544344432 35
Q ss_pred cccccccccccCCCCCCcccCCCCCCcEEEccCC-ccCCCCchhhhhcccCceEEccCCC
Q 003855 336 DLETLSLARNQFQGPIPESVGSLISLESLDLSGN-NLSGKIPKSLETLSQLKQFNVSHNR 394 (791)
Q Consensus 336 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N-~l~~~~~~~~~~l~~L~~l~l~~N~ 394 (791)
+|+.|+|++|.++ .+|.++..+++|+.|+|++| ++. .+|..+..+++|+.+++++|.
T Consensus 847 nL~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 847 NISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred ccCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 6777777777776 56677777777777777764 344 466666677777777777664
No 417
>PLN00181 protein SPA1-RELATED; Provisional
Probab=99.93 E-value=6e-26 Score=269.42 Aligned_cols=195 Identities=19% Similarity=0.266 Sum_probs=139.0
Q ss_pred ccC-Cccceeeeee-------ccCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEe
Q 003855 554 VRH-RNLIKILSSC-------SNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIH 625 (791)
Q Consensus 554 l~h-~niv~l~~~~-------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H 625 (791)
++| +||+++++++ ...+..+.++||+ +++|.+++......+++.++..++.||++||+||| +.+|+|
T Consensus 29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~~qi~~al~~lH----~~gIvH 103 (793)
T PLN00181 29 LSHIDYVRSLLGSHKEGNLDGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVFRQIVEIVNAAH----SQGIVV 103 (793)
T ss_pred hhHHHHHHHhhcccCCccccccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHHHHHHHHHHHHH----hCCeee
Confidence 455 5888888877 2234567788988 66999999876666999999999999999999999 789999
Q ss_pred cCCCCCCeEeCCC-------------------CcEEEeeeccccccCCCCC--------------cceeecccccccccC
Q 003855 626 CDLKPTNILLDEN-------------------MAAHVSDFGISKLLGEGED--------------SVTQTMTMATIGYMA 672 (791)
Q Consensus 626 ~dlk~~Nill~~~-------------------~~~kl~Dfgla~~~~~~~~--------------~~~~~~~~g~~~y~a 672 (791)
|||||+|||++.. +.+|++|||+++....... .......+||+.|||
T Consensus 104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y~A 183 (793)
T PLN00181 104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWYTS 183 (793)
T ss_pred ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcceEC
Confidence 9999999999654 4455666666653211000 001112357889999
Q ss_pred CCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHH
Q 003855 673 PEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIM 752 (791)
Q Consensus 673 PE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~ 752 (791)
||++.+..++.++|||||||++|||++|..|+..... ....+... ...+.. ........
T Consensus 184 PE~~~~~~~~~~sDVwSlGviL~ELl~~~~~~~~~~~---~~~~~~~~--------~~~~~~----------~~~~~~~~ 242 (793)
T PLN00181 184 PEEDNGSSSNCASDVYRLGVLLFELFCPVSSREEKSR---TMSSLRHR--------VLPPQI----------LLNWPKEA 242 (793)
T ss_pred hhhhccCCCCchhhhhhHHHHHHHHhhCCCchhhHHH---HHHHHHHh--------hcChhh----------hhcCHHHH
Confidence 9999999999999999999999999999887653111 11111000 000000 01123345
Q ss_pred HHHhhccccCCCCCCCHHHHHH
Q 003855 753 DLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 753 ~li~~cl~~~P~~RPt~~ev~~ 774 (791)
+++.+||+++|.+||+|.|+++
T Consensus 243 ~~~~~~L~~~P~~Rps~~eil~ 264 (793)
T PLN00181 243 SFCLWLLHPEPSCRPSMSELLQ 264 (793)
T ss_pred HHHHHhCCCChhhCcChHHHhh
Confidence 7888999999999999999975
No 418
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=1.3e-24 Score=265.51 Aligned_cols=338 Identities=20% Similarity=0.256 Sum_probs=272.8
Q ss_pred ccccCCCCCCeeecCCCc------ccccCCccccCCC-CCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCC
Q 003855 7 TEIGNLQNLQYLVFAENN------LSGLVPPTIFNIS-TMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIP 79 (791)
Q Consensus 7 ~~~~~l~~L~~L~Ls~n~------l~~~~~~~~~~l~-~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~ 79 (791)
..|.+|++|+.|.+..+. +...+|+.|..++ +|+.|.++++.++ .+|..+. ..+|++|+|++|+|. .++
T Consensus 552 ~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f~--~~~L~~L~L~~s~l~-~L~ 627 (1153)
T PLN03210 552 NAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNFR--PENLVKLQMQGSKLE-KLW 627 (1153)
T ss_pred HHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcCC--ccCCcEEECcCcccc-ccc
Confidence 458899999999997653 3445788888775 6999999999998 9998864 689999999999999 578
Q ss_pred ccCcCCCCCCEEeccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCC
Q 003855 80 HSITNATKLVALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILP 159 (791)
Q Consensus 80 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~ 159 (791)
..+..+++|+.|+|++|......+ .++.+++|+.|++++|..-. .++..+..+++|+.|++++|..-+.+|
T Consensus 628 ~~~~~l~~Lk~L~Ls~~~~l~~ip-~ls~l~~Le~L~L~~c~~L~--------~lp~si~~L~~L~~L~L~~c~~L~~Lp 698 (1153)
T PLN03210 628 DGVHSLTGLRNIDLRGSKNLKEIP-DLSMATNLETLKLSDCSSLV--------ELPSSIQYLNKLEDLDMSRCENLEILP 698 (1153)
T ss_pred cccccCCCCCEEECCCCCCcCcCC-ccccCCcccEEEecCCCCcc--------ccchhhhccCCCCEEeCCCCCCcCccC
Confidence 888999999999999876443444 48889999999999875321 234568899999999999986555667
Q ss_pred hhhhhhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCc-------ccCC
Q 003855 160 PVIGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLE-------GSIP 232 (791)
Q Consensus 160 ~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~-------~~~~ 232 (791)
..+ ...+|+.|.+++|......|.. ..+|+.|+|++|.++ ..|..+ .+++|++|++.++... ...+
T Consensus 699 ~~i--~l~sL~~L~Lsgc~~L~~~p~~---~~nL~~L~L~~n~i~-~lP~~~-~l~~L~~L~l~~~~~~~l~~~~~~l~~ 771 (1153)
T PLN03210 699 TGI--NLKSLYRLNLSGCSRLKSFPDI---STNISWLDLDETAIE-EFPSNL-RLENLDELILCEMKSEKLWERVQPLTP 771 (1153)
T ss_pred CcC--CCCCCCEEeCCCCCCccccccc---cCCcCeeecCCCccc-cccccc-cccccccccccccchhhccccccccch
Confidence 655 3467999999999877666653 468999999999998 455554 6889999999875432 1222
Q ss_pred ccccccCCCceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCC
Q 003855 233 YDLCHLKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKV 312 (791)
Q Consensus 233 ~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~ 312 (791)
..+...++|+.|+|++|.....+|..++++++|+.|+|++|...+.+|..+ .+++|+.|++++|.....+|.. .++
T Consensus 772 ~~~~~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~n 847 (1153)
T PLN03210 772 LMTMLSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STN 847 (1153)
T ss_pred hhhhccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccc
Confidence 233445789999999998877899999999999999999986555677665 7899999999998765555543 368
Q ss_pred CCEEecCCcccCCCCCcchhcccccccccccc-ccCCCCCCcccCCCCCCcEEEccCCc
Q 003855 313 LTVLDLSRNQLSGDIPSTIGALKDLETLSLAR-NQFQGPIPESVGSLISLESLDLSGNN 370 (791)
Q Consensus 313 L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~-N~l~~~~~~~~~~l~~L~~L~l~~N~ 370 (791)
|+.|+|++|.++ .+|..+..+++|+.|+|++ |++. .+|..+..+++|+.|++++|.
T Consensus 848 L~~L~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~-~l~~~~~~L~~L~~L~l~~C~ 904 (1153)
T PLN03210 848 ISDLNLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQ-RVSLNISKLKHLETVDFSDCG 904 (1153)
T ss_pred cCEeECCCCCCc-cChHHHhcCCCCCEEECCCCCCcC-ccCcccccccCCCeeecCCCc
Confidence 999999999998 7899999999999999998 4566 688888999999999999885
No 419
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.92 E-value=2e-24 Score=244.38 Aligned_cols=167 Identities=30% Similarity=0.377 Sum_probs=90.3
Q ss_pred CCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecCCccCCCCCccccCCCCCcEEEc
Q 003855 191 SGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHL 270 (791)
Q Consensus 191 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 270 (791)
++|+.|+|++|+|+++ |.. ..+|+.|++++|+|++ +|.. ..+|+.|+|++|+|++ +|.. .++|+.|++
T Consensus 302 ~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~L 369 (788)
T PRK15387 302 PGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLAS-LPTL---PSELYKLWA 369 (788)
T ss_pred cccceeECCCCccccC-CCC---cccccccccccCcccc-cccc---ccccceEecCCCccCC-CCCC---Ccccceehh
Confidence 3455555555555532 221 1235555555555552 3321 1345555555555552 3322 234556666
Q ss_pred CCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccccccccCCCC
Q 003855 271 GSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQGP 350 (791)
Q Consensus 271 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 350 (791)
++|+|.+ +|.. ..+|+.|++++|+|++ +|.. .++|+.|++++|+++ .+|.. ..+|+.|++++|+|+ .
T Consensus 370 s~N~L~~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~ 436 (788)
T PRK15387 370 YNNRLTS-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-R 436 (788)
T ss_pred hcccccc-Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-c
Confidence 6666653 3322 2346666666666653 3322 245667777777776 34542 235666777777776 5
Q ss_pred CCcccCCCCCCcEEEccCCccCCCCchhhhhc
Q 003855 351 IPESVGSLISLESLDLSGNNLSGKIPKSLETL 382 (791)
Q Consensus 351 ~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l 382 (791)
+|..+..+++|+.|+|++|+|++..+..+..+
T Consensus 437 LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L~~l 468 (788)
T PRK15387 437 LPESLIHLSSETTVNLEGNPLSERTLQALREI 468 (788)
T ss_pred cChHHhhccCCCeEECCCCCCCchHHHHHHHH
Confidence 66666677777777777777776666655443
No 420
>KOG0195 consensus Integrin-linked kinase [Signal transduction mechanisms]
Probab=99.92 E-value=8.3e-26 Score=213.07 Aligned_cols=250 Identities=23% Similarity=0.359 Sum_probs=188.6
Q ss_pred cccccccCCCcceEEEEEEecCCcEEEEEEeehhh--hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCC
Q 003855 503 FNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
.....+|.+...|+.|+|+|+ |..+++|++.... ....++|..|.-.++-+.||||+.++|+|..+....++..||+
T Consensus 192 lnl~tkl~e~hsgelwrgrwq-gndivakil~vr~~t~risrdfneefp~lrifshpnilpvlgacnsppnlv~isq~mp 270 (448)
T KOG0195|consen 192 LNLITKLAESHSGELWRGRWQ-GNDIVAKILNVREVTARISRDFNEEFPALRIFSHPNILPVLGACNSPPNLVIISQYMP 270 (448)
T ss_pred hhhhhhhccCCCccccccccc-CcchhhhhhhhhhcchhhcchhhhhCcceeeecCCchhhhhhhccCCCCceEeeeecc
Confidence 344557889999999999995 5677778876442 3344678889888888999999999999999999999999999
Q ss_pred CCCHHHHHhhCCC-CCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcc
Q 003855 581 NGSLEKWLYSHNY-FLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSV 659 (791)
Q Consensus 581 ~g~L~~~l~~~~~-~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~ 659 (791)
.|+|...++.... ..+..+..+++.++|+|++|||+.. .-|..--+.+..|++|++.+++|+= +-+++ +.
T Consensus 271 ~gslynvlhe~t~vvvd~sqav~faldiargmaflhsle--p~ipr~~lns~hvmidedltarism-ad~kf------sf 341 (448)
T KOG0195|consen 271 FGSLYNVLHEQTSVVVDHSQAVRFALDIARGMAFLHSLE--PMIPRFYLNSKHVMIDEDLTARISM-ADTKF------SF 341 (448)
T ss_pred chHHHHHHhcCccEEEecchHHHHHHHHHhhHHHHhhcc--hhhhhhhcccceEEecchhhhheec-cccee------ee
Confidence 9999999996643 4677889999999999999999632 2244446899999999999988741 11111 11
Q ss_pred eeecccccccccCCCccCCCC---CCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhh
Q 003855 660 TQTMTMATIGYMAPEYGSEGI---VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVR 736 (791)
Q Consensus 660 ~~~~~~g~~~y~aPE~~~~~~---~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~ 736 (791)
......-.+.||+||.++... .-.++|+|||++++||+.|+..||.+..+.|--. .+..
T Consensus 342 qe~gr~y~pawmspealqrkped~n~raadmwsfaillwel~trevpfadlspmecgm------------------kial 403 (448)
T KOG0195|consen 342 QEVGRAYSPAWMSPEALQRKPEDLNIRAADMWSFAILLWELNTREVPFADLSPMECGM------------------KIAL 403 (448)
T ss_pred eccccccCcccCCHHHHhcCchhcchhhhhHHHHHHHHHHhhccccccccCCchhhhh------------------hhhh
Confidence 111223467899999887655 3347999999999999999999998754433211 1111
Q ss_pred hHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 737 EEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 737 ~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
++.+...+...+..+.++|.-|.+.||.+||.+..|+-.|++++
T Consensus 404 eglrv~ippgis~hm~klm~icmnedpgkrpkfdmivpilekm~ 447 (448)
T KOG0195|consen 404 EGLRVHIPPGISRHMNKLMNICMNEDPGKRPKFDMIVPILEKMI 447 (448)
T ss_pred ccccccCCCCccHHHHHHHHHHhcCCCCcCCCcceehhhHHHhc
Confidence 12122222345566779999999999999999999999999874
No 421
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.91 E-value=3.9e-24 Score=242.00 Aligned_cols=266 Identities=26% Similarity=0.337 Sum_probs=174.3
Q ss_pred CCCCeeecCCCcccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCCEEe
Q 003855 13 QNLQYLVFAENNLSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLVALD 92 (791)
Q Consensus 13 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 92 (791)
.+-..|+|++|+|+ .+|..+. .+|+.|++++|+|+ .+|.. +++|++|+|++|+|+. +|.. .++|+.|+
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt-~LP~l----p~~Lk~LdLs~N~Lts-LP~l---p~sL~~L~ 268 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLT-SLPAL----PPELRTLEVSGNQLTS-LPVL---PPGLLELS 268 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCC-CCCCC----CCCCcEEEecCCccCc-ccCc---ccccceee
Confidence 45678999999998 5677775 48999999999998 78863 5789999999999994 4543 36788999
Q ss_pred ccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChhhhhhhhhhhhh
Q 003855 93 LGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPVIGNFSASLQKF 172 (791)
Q Consensus 93 L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L 172 (791)
|++|.+..+.. . ..+|+.|++++|+|+.++. ..++|+.|+|++|+|+++ |. .+.+
T Consensus 269 Ls~N~L~~Lp~-l---p~~L~~L~Ls~N~Lt~LP~------------~p~~L~~LdLS~N~L~~L-p~----lp~~---- 323 (788)
T PRK15387 269 IFSNPLTHLPA-L---PSGLCKLWIFGNQLTSLPV------------LPPGLQELSVSDNQLASL-PA----LPSE---- 323 (788)
T ss_pred ccCCchhhhhh-c---hhhcCEEECcCCccccccc------------cccccceeECCCCccccC-CC----Cccc----
Confidence 99998875432 2 2467778888888886642 236788888888888753 32 1123
Q ss_pred hcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecCCccC
Q 003855 173 YAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLS 252 (791)
Q Consensus 173 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 252 (791)
|+.|++++|+|++ +|.. ..+|++|+|++|+|+ .+|.. ..+|+.|++++|+|+
T Consensus 324 --------------------L~~L~Ls~N~L~~-LP~l---p~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~ 375 (788)
T PRK15387 324 --------------------LCKLWAYNNQLTS-LPTL---PSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLT 375 (788)
T ss_pred --------------------ccccccccCcccc-cccc---ccccceEecCCCccC-CCCCC---Ccccceehhhccccc
Confidence 4444555555542 2211 134555555555555 23322 134555556666665
Q ss_pred CCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchh
Q 003855 253 GHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIG 332 (791)
Q Consensus 253 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~ 332 (791)
. +|.. .++|+.|+|++|+|++ +|.. .++|+.|++++|.++. +|.. ..+|+.|++++|+|+ .+|..+.
T Consensus 376 ~-LP~l---~~~L~~LdLs~N~Lt~-LP~l---~s~L~~LdLS~N~Lss-IP~l---~~~L~~L~Ls~NqLt-~LP~sl~ 442 (788)
T PRK15387 376 S-LPAL---PSGLKELIVSGNRLTS-LPVL---PSELKELMVSGNRLTS-LPML---PSGLLSLSVYRNQLT-RLPESLI 442 (788)
T ss_pred c-Cccc---ccccceEEecCCcccC-CCCc---ccCCCEEEccCCcCCC-CCcc---hhhhhhhhhccCccc-ccChHHh
Confidence 2 3432 2456677777777763 3332 2467777777777764 4443 245677888888887 6777788
Q ss_pred ccccccccccccccCCCCCCcccC
Q 003855 333 ALKDLETLSLARNQFQGPIPESVG 356 (791)
Q Consensus 333 ~l~~L~~L~L~~N~l~~~~~~~~~ 356 (791)
.+++|+.|+|++|+|++..+..+.
T Consensus 443 ~L~~L~~LdLs~N~Ls~~~~~~L~ 466 (788)
T PRK15387 443 HLSSETTVNLEGNPLSERTLQALR 466 (788)
T ss_pred hccCCCeEECCCCCCCchHHHHHH
Confidence 888888888888888876666553
No 422
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.90 E-value=3.1e-23 Score=217.61 Aligned_cols=169 Identities=23% Similarity=0.227 Sum_probs=130.8
Q ss_pred HHHHhhccccccccCCCcceEEEEEEec--CCcEEEEEEeehh-----hhHHHHHHHHHHHHHHhccCCccceeeeeecc
Q 003855 496 IQRATDEFNECNLLGTGSFGSVYKGTIS--DGTDVAIKIFNLQ-----LERAFRSFDSECEVLRNVRHRNLIKILSSCSN 568 (791)
Q Consensus 496 ~~~~~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~-----~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~ 568 (791)
.....++|.+.+.||+|+||+||+|... +++.||||++... .....+.+.+|++++++++|+|++..+..+
T Consensus 13 ~~~~~~~Y~~~~~IG~G~fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~-- 90 (365)
T PRK09188 13 IPALSARFVETAVLKRDVFSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT-- 90 (365)
T ss_pred cccccCCceEccEEeecCcEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc--
Confidence 3445678999999999999999999864 5778899986532 122356689999999999999998533322
Q ss_pred CCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCC-CCCCeEeCCCCcEEEeeec
Q 003855 569 PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDL-KPTNILLDENMAAHVSDFG 647 (791)
Q Consensus 569 ~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dl-k~~Nill~~~~~~kl~Dfg 647 (791)
+..++||||++|++|.. +... . ...++.++++||.||| +.+|+|||| ||+||+++.++.+||+|||
T Consensus 91 -~~~~LVmE~~~G~~L~~-~~~~----~---~~~~~~~i~~aL~~lH----~~gIiHrDL~KP~NILv~~~~~ikLiDFG 157 (365)
T PRK09188 91 -GKDGLVRGWTEGVPLHL-ARPH----G---DPAWFRSAHRALRDLH----RAGITHNDLAKPQNWLMGPDGEAAVIDFQ 157 (365)
T ss_pred -CCcEEEEEccCCCCHHH-hCcc----c---hHHHHHHHHHHHHHHH----HCCCeeCCCCCcceEEEcCCCCEEEEECc
Confidence 45799999999999973 2111 1 1467889999999999 789999999 9999999999999999999
Q ss_pred cccccCCCCCcce------eecccccccccCCCccCCC
Q 003855 648 ISKLLGEGEDSVT------QTMTMATIGYMAPEYGSEG 679 (791)
Q Consensus 648 la~~~~~~~~~~~------~~~~~g~~~y~aPE~~~~~ 679 (791)
+|+.+........ .....+++.|+|||++...
T Consensus 158 lA~~~~~~~~~~~~~~~~d~~~~~~~~~~~~pe~~~~~ 195 (365)
T PRK09188 158 LASVFRRRGALYRIAAYEDLRHLLKHKRTYAPDALTPR 195 (365)
T ss_pred cceecccCcchhhhhhhhhhhhhhccCccCCcccCChh
Confidence 9997765432111 1234678889999986543
No 423
>KOG1164 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.88 E-value=1.8e-21 Score=206.07 Aligned_cols=261 Identities=19% Similarity=0.192 Sum_probs=196.1
Q ss_pred ccccccccCCCcceEEEEEEecCC--cEEEEEEeehhhhHHHHHHHHHHHHHHhccC----Cccceeeeee-ccCCeeeE
Q 003855 502 EFNECNLLGTGSFGSVYKGTISDG--TDVAIKIFNLQLERAFRSFDSECEVLRNVRH----RNLIKILSSC-SNPDFKAL 574 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~~~--~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h----~niv~l~~~~-~~~~~~~l 574 (791)
+|.+.+.||+|+||.||.+..... ..+|+|.-..........+..|..++..+.. +++..+++.. ..+...++
T Consensus 19 ~~~i~~~iG~G~fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~~~~~~~~i 98 (322)
T KOG1164|consen 19 RYKLGKKIGEGGFGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGRSTEDFNFI 98 (322)
T ss_pred ceEEeeeccccCCceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEeccCCCceeEE
Confidence 799999999999999999996543 5789888765433222267778888888862 6889999888 57778899
Q ss_pred EEecCCCCCHHHHHhhCC-CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC-----CcEEEeeecc
Q 003855 575 VLEFMPNGSLEKWLYSHN-YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN-----MAAHVSDFGI 648 (791)
Q Consensus 575 v~e~~~~g~L~~~l~~~~-~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~-----~~~kl~Dfgl 648 (791)
||+.+ |.+|.++..... ..++..+..+|+.|++.+|+++| +.+++||||||.|+.+... -.+.+.|||+
T Consensus 99 VM~l~-G~sL~dl~~~~~~~~fs~~T~l~ia~q~l~~l~~lH----~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGl 173 (322)
T KOG1164|consen 99 VMSLL-GPSLEDLRKRNPPGRFSRKTVLRIAIQNLNALEDLH----SKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGL 173 (322)
T ss_pred EEecc-CccHHHHHHhCCCCCcCHhHHHHHHHHHHHHHHHHH----hcCcccCCcCHHHeeecCCCCcccceEEEEecCC
Confidence 99988 889999886544 67999999999999999999999 7899999999999999854 4699999999
Q ss_pred ccccC--CCCCc----c-e-eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHH
Q 003855 649 SKLLG--EGEDS----V-T-QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKE 720 (791)
Q Consensus 649 a~~~~--~~~~~----~-~-~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~ 720 (791)
|+.+. ..... . . .....||..|+++....+...+++.|+||++.++.|+..|..||........ .......
T Consensus 174 ar~~~~~~~~~~~~~~~r~~~~~~rGT~ry~S~~~H~~~e~~r~DDles~~Y~l~el~~g~LPW~~~~~~~~-~~~~~~~ 252 (322)
T KOG1164|consen 174 ARRFKYVGDSGGNLRPPRPQKGLFRGTLRYASINVHLGIEQGRRDDLESLFYMLLELLKGSLPWEALEMTDL-KSKFEKD 252 (322)
T ss_pred CccccccCCCCcccccCCCCccCCCCccccccHHHhCCCccCCchhhhhHHHHHHHHhcCCCCCccccccch-HHHHHHH
Confidence 98332 11110 1 1 1234599999999999999999999999999999999999999965332211 1111000
Q ss_pred hcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 721 SLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 721 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
........ .....+.++.++...+-..+..++|....+.+.+.+....
T Consensus 253 ~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~Pdy~~~~~~l~~~~~~ 300 (322)
T KOG1164|consen 253 PRKLLTDR--------------FGDLKPEEFAKILEYIDSLDYEDKPDYEKLAELLKDVFDS 300 (322)
T ss_pred hhhhcccc--------------ccCCChHHHHHHHHHhhccCCcCCCCHHHHHHHHHHHHHh
Confidence 00000000 0112345566777777778999999999999998877554
No 424
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.87 E-value=1e-22 Score=228.16 Aligned_cols=253 Identities=21% Similarity=0.210 Sum_probs=187.5
Q ss_pred cccccCCCcceEEEEEEec-CCcEEEEEEee-----hhhh-HHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 505 ECNLLGTGSFGSVYKGTIS-DGTDVAIKIFN-----LQLE-RAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 505 ~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~-----~~~~-~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
..+.+|.|++|.|+..... ....++.|.+. .... .....+..|+.+-..++|||++..+..+.+.....-+||
T Consensus 322 ~~~~~g~ga~g~~~~~~~~~~~~~~~~~~~r~~~~~~~s~~~~~~~i~sE~~i~~~l~h~~~~e~l~~~~~~~~~~~~mE 401 (601)
T KOG0590|consen 322 PGRVLGSGAYGSVRIAKRRSDLKSFPEKEFRVRVKPTESERKYNYNITSEFCIGSSLSHPNIIETLDIVQEIDGILQSME 401 (601)
T ss_pred ccceeeecccCceEEEEecCCCccchhhhhhcccCCcccHHHHhhhhhhheeecccccCCchhhhHHHHhhcccchhhhh
Confidence 4568999999977776532 33334444332 1111 222236677778888899999998888877766666799
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
|+++ ||..++.... .+...++..++.|+..|+.|+| +.+|.|||+|++|++++.+|.+||+|||.+....-...
T Consensus 402 ~~~~-Dlf~~~~~~~-~~~~~e~~c~fKqL~~Gv~y~h----~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e 475 (601)
T KOG0590|consen 402 YCPY-DLFSLVMSNG-KLTPLEADCFFKQLLRGVKYLH----SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWE 475 (601)
T ss_pred cccH-HHHHHHhccc-ccchhhhhHHHHHHHHHHHHHH----hcCceeccCccccEEEecCCceEEeecCcceeeccCcc
Confidence 9999 9999998763 3788889999999999999999 78999999999999999999999999999987654433
Q ss_pred c--ceeecccccccccCCCccCCCCCCc-cccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhh
Q 003855 658 S--VTQTMTMATIGYMAPEYGSEGIVSA-KCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANL 734 (791)
Q Consensus 658 ~--~~~~~~~g~~~y~aPE~~~~~~~~~-~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 734 (791)
. ......+|+..|+|||++.+..|++ ..||||.|+++..|.+|+.||......+..+ ...........
T Consensus 476 ~~~~~~~g~~gS~pY~apE~~~~~~ydpr~vDiwS~~ii~~~m~~~~~~Wk~a~~~~~~~---~~~~~~~~~~~------ 546 (601)
T KOG0590|consen 476 KNIHESSGIVGSDPYLAPEVLTGKEYDPRAVDVWSCGIIYICMILGRFPWKVAKKSDNSF---KTNNYSDQRNI------ 546 (601)
T ss_pred hhhhhhcCcccCCcCcCcccccccccCcchhhhhhccceEEEEecCCCccccccccccch---hhhcccccccc------
Confidence 3 4455568999999999999988877 4899999999999999999987643333222 00001111111
Q ss_pred hhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 735 VREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
...........+..-..++.++++++|.+|.|+.+|++
T Consensus 547 --~~~~~~~~~~lp~~~~~~~~~~l~~~P~~R~ti~~i~~ 584 (601)
T KOG0590|consen 547 --FEGPNRLLSLLPRETRIIIYRMLQLDPTKRITIEQILN 584 (601)
T ss_pred --ccChHHHHHhchhhHHHHHHHHccCChhheecHHHHhh
Confidence 11111222345566678999999999999999999975
No 425
>KOG1165 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.87 E-value=7.8e-21 Score=185.01 Aligned_cols=263 Identities=16% Similarity=0.158 Sum_probs=200.7
Q ss_pred hccccccccCCCcceEEEEEE-ecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeeeEEEec
Q 003855 501 DEFNECNLLGTGSFGSVYKGT-ISDGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
-.|++.++||+|.||+++.|+ +-+++.||||.=...+ ...++..|.+..+.+ ..++|..++-+..++-+-.+|+|.
T Consensus 28 ~hyrVGkKIGeGsFG~lf~G~Nl~nne~VAIKfEPrkS--~APQLrdEYr~YKlL~g~~GIP~vYYFGqeG~~NiLVidL 105 (449)
T KOG1165|consen 28 PHYRVGKKIGEGSFGVLFLGKNLYNNEPVAIKFEPRKS--EAPQLRDEYRTYKLLGGTEGIPQVYYFGQEGKYNILVIDL 105 (449)
T ss_pred ccceeccccccCcceeeecccccccCceEEEEeccccC--CcchHHHHHHHHHHHcCCCCCCceeeeccccchhhhhhhh
Confidence 368999999999999999998 4579999999644332 235677799999988 579999999888888888999998
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC-----CcEEEeeeccccccC
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN-----MAAHVSDFGISKLLG 653 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~-----~~~kl~Dfgla~~~~ 653 (791)
+ |.||.|+..-.++.++..++..+|.|+..-++|+| ++..|+|||||+|+||... ..+.++|||+|+.+.
T Consensus 106 L-GPSLEDLFD~CgR~FSvKTV~miA~Qmi~rie~vH----~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~Yr 180 (449)
T KOG1165|consen 106 L-GPSLEDLFDLCGRRFSVKTVAMIAKQMITRIEYVH----EKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYR 180 (449)
T ss_pred h-CcCHHHHHHHhcCcccHHhHHHHHHHHHHHHHHHH----hcceeecccCccceeecCCCCCCCceEEEEeccchhhhc
Confidence 8 88999998866667999999999999999999999 6789999999999999754 358999999999887
Q ss_pred CCCCc-----ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhh
Q 003855 654 EGEDS-----VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTE 728 (791)
Q Consensus 654 ~~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 728 (791)
+.... .......||.+||+--...+.+.+.+.|.=|+|-|+.+.+.|..||.+.... ....++-+--.......
T Consensus 181 Dp~TkqHIPYrE~KSLsGTARYMSINTHlGrEQSRRDDLEaLGHvFmYFLRGsLPWQGLKA~-tnK~kYeKIGe~Kr~T~ 259 (449)
T KOG1165|consen 181 DPKTKQHIPYREHKSLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFLRGSLPWQGLKAD-TNKEKYEKIGETKRSTP 259 (449)
T ss_pred CccccccCccccccccccceeeeEeeccccchhhhhhhHHHhhhhhhhhccCCCccccccCc-chHHHHHHhccccccCC
Confidence 65432 2233446999999999999999999999999999999999999999875322 11122111000000000
Q ss_pred hcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHHH
Q 003855 729 VVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKVK 782 (791)
Q Consensus 729 ~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~~ 782 (791)
-....+..|.++..-+.-.-..+=.+-|...-+...+..+.+.
T Consensus 260 -----------i~~Lc~g~P~efa~Yl~yvR~L~F~E~PDYdylr~Lf~dvldr 302 (449)
T KOG1165|consen 260 -----------IEVLCEGFPEEFATYLRYVRRLDFFETPDYDYLRKLFDDVLDR 302 (449)
T ss_pred -----------HHHHHhcCHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHh
Confidence 0112234566666777777777778888877666666555444
No 426
>KOG1163 consensus Casein kinase (serine/threonine/tyrosine protein kinase) [Signal transduction mechanisms]
Probab=99.86 E-value=3.7e-21 Score=179.03 Aligned_cols=263 Identities=19% Similarity=0.208 Sum_probs=197.9
Q ss_pred hhccccccccCCCcceEEEEEE-ecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccC-CccceeeeeeccCCeeeEEEe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGT-ISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRH-RNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~-~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h-~niv~l~~~~~~~~~~~lv~e 577 (791)
..+|.++++||.|+||.+|.|. ..+|..||||+=....+ ..++..|..+.+.+++ ..|..+..+..+.+.-.+||+
T Consensus 14 ~gky~lvrkiGsGSFGdIy~~~~i~~ge~VAiK~Es~~a~--hpqL~yEskvY~iL~~g~GiP~i~~y~~e~~ynvlVMd 91 (341)
T KOG1163|consen 14 GGKYKLVRKIGSGSFGDIYLGISITSGEEVAIKLESSKAK--HPQLLYESKVYRILQGGVGIPHIRHYGTEKDYNVLVMD 91 (341)
T ss_pred ccceEEEEeecCCchhheeeeeeccCCceEEEEeecccCC--CcchhHHHHHHHHhccCCCCchhhhhccccccceeeee
Confidence 4689999999999999999998 56899999998654433 2467778999999965 678888888888888899999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC---CCcEEEeeeccccccCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE---NMAAHVSDFGISKLLGE 654 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~---~~~~kl~Dfgla~~~~~ 654 (791)
.. |.||.+...--.+.++..+++..+-|+..-++|+| .++++||||||+|.|+.- ...+.++|||+|+.+.+
T Consensus 92 LL-GPsLEdLfnfC~R~ftmkTvLMLaDQml~RiEyvH----~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d 166 (341)
T KOG1163|consen 92 LL-GPSLEDLFNFCSRRFTMKTVLMLADQMLSRIEYVH----LRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRD 166 (341)
T ss_pred cc-CccHHHHHHHHhhhhhHHhHHHHHHHHHHHHHHHH----hhccccccCCccceeeccccccceEEEEeccchhhhcc
Confidence 88 88999998855556899999999999999999999 678999999999999963 45689999999998765
Q ss_pred CCCc-----ceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhh
Q 003855 655 GEDS-----VTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEV 729 (791)
Q Consensus 655 ~~~~-----~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (791)
.... .......||.+|.+--...+...+.+.|+=|+|.++...-.|..||.+...... .+++ ..+
T Consensus 167 ~~t~~HIpyre~r~ltGTaRYASinAh~g~eqSRRDDmeSvgYvLmYfnrG~LPWQglka~tk-~QKy---------EkI 236 (341)
T KOG1163|consen 167 IRTRQHIPYREDRNLTGTARYASINAHLGIEQSRRDDMESVGYVLMYFNRGSLPWQGLKAATK-KQKY---------EKI 236 (341)
T ss_pred ccccccCccccCCccceeeeehhhhhhhhhhhhhhhhhhhhcceeeeeecCCCcccccchhhH-HHHH---------HHH
Confidence 4322 223344689999888877777788899999999999999999999987533211 1111 001
Q ss_pred cchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 730 VDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 730 ~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
....+.. .-.......|.++.-.+.-|-..-=++-|...-+-+.+..+..
T Consensus 237 ~EkK~s~--~ie~LC~G~P~EF~myl~Y~R~L~F~E~Pdy~ylrqlFriLfr 286 (341)
T KOG1163|consen 237 SEKKMST--PIEVLCKGFPAEFAMYLNYCRGLGFEEKPDYMYLRQLFRILFR 286 (341)
T ss_pred HHhhcCC--CHHHHhCCCcHHHHHHHHHHhhcCCCCCCcHHHHHHHHHHHHh
Confidence 1111000 0011223455667777888888888888887777776665543
No 427
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=1e-21 Score=224.18 Aligned_cols=163 Identities=28% Similarity=0.451 Sum_probs=99.6
Q ss_pred CCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecCCccCCCCCccccCCCCCcEEEc
Q 003855 191 SGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHL 270 (791)
Q Consensus 191 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L 270 (791)
++|+.|+|++|+|+. +|..+. ++|+.|+|++|+|++ +|..+. ++|+.|++++|.++. +|..+. ++|+.|++
T Consensus 262 s~L~~L~Ls~N~L~~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~L 332 (754)
T PRK15370 262 SALQSLDLFHNKISC-LPENLP--EELRYLSVYDNSIRT-LPAHLP--SGITHLNVQSNSLTA-LPETLP--PGLKTLEA 332 (754)
T ss_pred CCCCEEECcCCccCc-cccccC--CCCcEEECCCCcccc-Ccccch--hhHHHHHhcCCcccc-CCcccc--ccceeccc
Confidence 357777777777763 444443 467777777777763 443332 356677777777763 443332 56777777
Q ss_pred CCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccccccccCCCC
Q 003855 271 GSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQGP 350 (791)
Q Consensus 271 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~ 350 (791)
++|.+++ +|..+. ++|+.|++++|+|+ .+|..+. ++|+.|+|++|+|+ .+|..+. ..|+.|++++|+|+ .
T Consensus 333 s~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~lp--~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~ 402 (754)
T PRK15370 333 GENALTS-LPASLP--PELQVLDVSKNQIT-VLPETLP--PTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-R 402 (754)
T ss_pred cCCcccc-CChhhc--CcccEEECCCCCCC-cCChhhc--CCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-c
Confidence 7777764 444442 56777777777776 3454442 46777777777777 4555443 35777777777776 4
Q ss_pred CCccc----CCCCCCcEEEccCCccC
Q 003855 351 IPESV----GSLISLESLDLSGNNLS 372 (791)
Q Consensus 351 ~~~~~----~~l~~L~~L~l~~N~l~ 372 (791)
+|..+ +.++++..|+|.+|+++
T Consensus 403 LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 403 LPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred CchhHHHHhhcCCCccEEEeeCCCcc
Confidence 44433 33466677777777766
No 428
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.86 E-value=8.9e-22 Score=224.67 Aligned_cols=287 Identities=22% Similarity=0.336 Sum_probs=176.7
Q ss_pred CCCCeeecCCCcccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCCEEe
Q 003855 13 QNLQYLVFAENNLSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLVALD 92 (791)
Q Consensus 13 ~~L~~L~Ls~n~l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 92 (791)
.+.+.|++++++++. +|..+. ++|+.|+|++|+|+ .+|..++ ++|++|+|++|+++. +|..+. .+|+.|+
T Consensus 178 ~~~~~L~L~~~~Lts-LP~~Ip--~~L~~L~Ls~N~Lt-sLP~~l~---~nL~~L~Ls~N~Lts-LP~~l~--~~L~~L~ 247 (754)
T PRK15370 178 NNKTELRLKILGLTT-IPACIP--EQITTLILDNNELK-SLPENLQ---GNIKTLYANSNQLTS-IPATLP--DTIQEME 247 (754)
T ss_pred cCceEEEeCCCCcCc-CCcccc--cCCcEEEecCCCCC-cCChhhc---cCCCEEECCCCcccc-CChhhh--ccccEEE
Confidence 467899999999984 566553 57999999999998 8888764 589999999999984 566554 4799999
Q ss_pred ccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChhhhhhhhhhhhh
Q 003855 93 LGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPVIGNFSASLQKF 172 (791)
Q Consensus 93 L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L 172 (791)
|++|.+..++ ..+. .+|+.|++++|+|+.++.. +. ++|+.|++++|+|+. +|..+ +.+|+.|
T Consensus 248 Ls~N~L~~LP-~~l~--s~L~~L~Ls~N~L~~LP~~---------l~--~sL~~L~Ls~N~Lt~-LP~~l---p~sL~~L 309 (754)
T PRK15370 248 LSINRITELP-ERLP--SALQSLDLFHNKISCLPEN---------LP--EELRYLSVYDNSIRT-LPAHL---PSGITHL 309 (754)
T ss_pred CcCCccCcCC-hhHh--CCCCEEECcCCccCccccc---------cC--CCCcEEECCCCcccc-Ccccc---hhhHHHH
Confidence 9999998543 3332 4788899999998876532 22 478999999998885 34332 2456777
Q ss_pred hcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecCCccC
Q 003855 173 YAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLS 252 (791)
Q Consensus 173 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 252 (791)
++++|+++. +|..+. ++|+.|++++|.++. +|..+. ++|+.|+|++|+|+ .+|..
T Consensus 310 ~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l~--~sL~~L~Ls~N~L~-~LP~~------------------ 364 (754)
T PRK15370 310 NVQSNSLTA-LPETLP--PGLKTLEAGENALTS-LPASLP--PELQVLDVSKNQIT-VLPET------------------ 364 (754)
T ss_pred HhcCCcccc-CCcccc--ccceeccccCCcccc-CChhhc--CcccEEECCCCCCC-cCChh------------------
Confidence 777777663 343322 456666666666653 333332 45555555555555 23332
Q ss_pred CCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcc----cccCCCCCEEecCCcccCCCCC
Q 003855 253 GHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSN----VQKLKVLTVLDLSRNQLSGDIP 328 (791)
Q Consensus 253 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~----~~~l~~L~~L~l~~N~l~~~~~ 328 (791)
+. ++|+.|+|++|+|+. +|..+. ..|+.|++++|+++ .+|.. +..++.+..|++.+|.++.
T Consensus 365 ------lp--~~L~~LdLs~N~Lt~-LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls~--- 429 (754)
T PRK15370 365 ------LP--PTITTLDVSRNALTN-LPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFSE--- 429 (754)
T ss_pred ------hc--CCcCEEECCCCcCCC-CCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCccH---
Confidence 21 345555555555552 233222 24555666666665 33332 3344677888888888762
Q ss_pred cchhccccccccccccccCCC-CCCcccCCCCCCcEEEccCCcc
Q 003855 329 STIGALKDLETLSLARNQFQG-PIPESVGSLISLESLDLSGNNL 371 (791)
Q Consensus 329 ~~~~~l~~L~~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~l 371 (791)
..+.+|+.| ++.+.+.| .++...+.+.+++....-.+.+
T Consensus 430 ---~tl~~L~~L-l~s~~~~gp~i~~~~~~~~~l~~~~~l~~a~ 469 (754)
T PRK15370 430 ---RTIQNMQRL-MSSVGYQGPRVLFAMGDFSIVRVTRPLHQAV 469 (754)
T ss_pred ---HHHHHHHHh-hhcccccCCcccccccccccccccchHHHHH
Confidence 345555555 44454443 2333444444444433333333
No 429
>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]
Probab=99.86 E-value=2.3e-20 Score=200.46 Aligned_cols=258 Identities=30% Similarity=0.396 Sum_probs=198.4
Q ss_pred cccccccCCCcceEEEEEEecCCcEEEEEEeehhhhH---HHHHHHHHHHHHHhccCC-ccceeeeeeccCCeeeEEEec
Q 003855 503 FNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLER---AFRSFDSECEVLRNVRHR-NLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~---~~~~~~~e~~~l~~l~h~-niv~l~~~~~~~~~~~lv~e~ 578 (791)
|...+.||.|+||.||++... ..+++|.+...... ....+.+|+.+++.+.|+ +++++.+.+......+++++|
T Consensus 2 ~~~~~~l~~g~~~~v~~~~~~--~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 79 (384)
T COG0515 2 YRILRKLGEGSFGEVYLARDR--KLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFFQDEGSLYLVMEY 79 (384)
T ss_pred ceeEEeecCCCCeEEEEEEec--cEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEEecCCEEEEEEec
Confidence 667789999999999999986 78999988765432 467899999999999988 799999999777778999999
Q ss_pred CCCCCHHHHHhhCC--CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC-cEEEeeeccccccCCC
Q 003855 579 MPNGSLEKWLYSHN--YFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM-AAHVSDFGISKLLGEG 655 (791)
Q Consensus 579 ~~~g~L~~~l~~~~--~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfgla~~~~~~ 655 (791)
+.++++.+++.... ..+.......++.|++.++.|+| ..+++|||+||+||+++..+ .++++|||.++.....
T Consensus 80 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~H----~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~ 155 (384)
T COG0515 80 VDGGSLEDLLKKIGRKGPLSESEALFILAQILSALEYLH----SKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDP 155 (384)
T ss_pred CCCCcHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHH----hCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCC
Confidence 99999997777654 25889999999999999999999 67899999999999999988 7999999999866544
Q ss_pred CCcc----eeecccccccccCCCccCC---CCCCccccHHhHHHHHHHHHhCCCCCCccccC--cchHHHHHHHhcCCCh
Q 003855 656 EDSV----TQTMTMATIGYMAPEYGSE---GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTG--EMSLRRWVKESLPHGL 726 (791)
Q Consensus 656 ~~~~----~~~~~~g~~~y~aPE~~~~---~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~--~~~~~~~~~~~~~~~~ 726 (791)
.... ......|+..|+|||.... ..++...|+||+|++++++++|..|+...... .......+........
T Consensus 156 ~~~~~~~~~~~~~~~t~~~~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (384)
T COG0515 156 GSTSSIPALPSTSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLKIILELPTPSL 235 (384)
T ss_pred CccccccccccccccccccCCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCccccHHHHHHHHHhcCCccc
Confidence 3221 2345679999999998877 57889999999999999999999996653321 1122222221111100
Q ss_pred hhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHH
Q 003855 727 TEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAK 775 (791)
Q Consensus 727 ~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~ 775 (791)
......... ......+.+++..|+..+|..|.++.+....
T Consensus 236 ~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 275 (384)
T COG0515 236 ASPLSPSNP---------ELISKAASDLLKKLLAKDPKNRLSSSSDLSH 275 (384)
T ss_pred ccccCcccc---------chhhHHHHHHHHHHHhcCchhcCCHHHHhhc
Confidence 000000000 1223457789999999999999999987764
No 430
>KOG1023 consensus Natriuretic peptide receptor, guanylate cyclase [Signal transduction mechanisms]
Probab=99.86 E-value=1.4e-21 Score=208.17 Aligned_cols=219 Identities=26% Similarity=0.353 Sum_probs=169.1
Q ss_pred HHhccCCccceeeeeeccCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCC
Q 003855 551 LRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKP 630 (791)
Q Consensus 551 l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~ 630 (791)
|+.+.|.|+.+++|.+.++...+.|.+||..|+|.+.+......+++.....++++|+.||.|+|+ +.--.|+.+++
T Consensus 1 l~~l~h~n~~~f~g~~~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~rdi~~Gl~ylh~---s~i~~hg~l~s 77 (484)
T KOG1023|consen 1 LRQLDHDNLNKFIGASVDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFIRDISKGLAYLHN---SPIGYHGALKS 77 (484)
T ss_pred CcccchhhhhhheeeEecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHHHHHHHHHHHHhc---Ccceeeeeecc
Confidence 356789999999999999999999999999999999999887789999999999999999999994 33339999999
Q ss_pred CCeEeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCC-------CCCccccHHhHHHHHHHHHhCCCC
Q 003855 631 TNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEG-------IVSAKCDVYSYGVLLMETFTRKRP 703 (791)
Q Consensus 631 ~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~-------~~~~~~Dv~s~G~vl~elltg~~p 703 (791)
+|+++|..+.+|++|||+.................-..-|.|||.+... ..+.++||||||++++|+++++.|
T Consensus 78 ~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~ei~~r~~~ 157 (484)
T KOG1023|consen 78 SNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLWTAPELLRGALSQSLESALTQKGDIYSFGIIMYEILFRSGP 157 (484)
T ss_pred ccceeeeeEEEEechhhhcccccccccccccchhHHHHhccCHHHhcccccccccccccccCCeehHHHHHHHHHhccCc
Confidence 9999999999999999999876432222222222345679999987663 146789999999999999999999
Q ss_pred CCccccCcch--HHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHHH
Q 003855 704 TDEMFTGEMS--LRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIKV 781 (791)
Q Consensus 704 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~~ 781 (791)
|+.....+.. ....++. .....+.+.+.... +..+.+..++.+||..+|++||++.+|...++.+..
T Consensus 158 ~~~~~~~~~~~eii~~~~~----~~~~~~rP~i~~~~-------e~~~~l~~l~~~cw~e~P~~rPs~~~i~~~~~~~~~ 226 (484)
T KOG1023|consen 158 FDLRNLVEDPDEIILRVKK----GGSNPFRPSIELLN-------ELPPELLLLVARCWEEIPEKRPSIEQIRSKLLTINK 226 (484)
T ss_pred cccccccCChHHHHHHHHh----cCCCCcCcchhhhh-------hcchHHHHHHHHhcccChhhCccHHHHHhhhhhhcc
Confidence 9874443332 2222222 11222222222111 344568899999999999999999999999988765
Q ss_pred Hh
Q 003855 782 KF 783 (791)
Q Consensus 782 ~~ 783 (791)
..
T Consensus 227 ~~ 228 (484)
T KOG1023|consen 227 GG 228 (484)
T ss_pred cc
Confidence 43
No 431
>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional
Probab=99.83 E-value=6.2e-21 Score=185.59 Aligned_cols=171 Identities=12% Similarity=0.131 Sum_probs=132.5
Q ss_pred HhhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHH---------HHHHHHHHHHHhccCCccceeeeeeccC
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAF---------RSFDSECEVLRNVRHRNLIKILSSCSNP 569 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~---------~~~~~e~~~l~~l~h~niv~l~~~~~~~ 569 (791)
...+|+..+.+|.|+||.||.+.. ++..+|||++........ +.+.+|+..+.++.||+|..+.+++...
T Consensus 29 l~~~y~~~~~l~~~~f~~v~l~~~-~~~~~iiKvf~~~~~~~~~~~~~f~~g~~~e~Ea~~l~rL~~~GI~~~~d~~~~~ 107 (232)
T PRK10359 29 LSYNIKTIKVFRNIDDTKVSLIDT-DYGKYILKVFAPKVKRTERFLKSFVKGDYYENLIVQTDRVRSEGLASLNDFYLLA 107 (232)
T ss_pred hhCceEEEEEecCCCceEEEEEec-CCCcEEEEEechhcCchHHHHHhhhhhHHHHHHHHHHHHHHHCCCCcceEeeeec
Confidence 357899999999999999999766 577899999975432211 2268899999999999999998886532
Q ss_pred --------CeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcE
Q 003855 570 --------DFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAA 641 (791)
Q Consensus 570 --------~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~ 641 (791)
...++||||++|.+|.++.. .+. ....+++.++..+| ..+++|||++|+||++++++ +
T Consensus 108 ~~~~~~~~~~~~lvmEyi~G~tL~~~~~-----~~~----~~~~~i~~~l~~lH----~~gi~H~Dikp~Nili~~~g-i 173 (232)
T PRK10359 108 ERKTLRYAHTYIMLIEYIEGVELNDMPE-----ISE----DVKAKIKASIESLH----QHGMVSGDPHKGNFIVSKNG-L 173 (232)
T ss_pred ccccccccCCeEEEEEEECCccHHHhhh-----ccH----HHHHHHHHHHHHHH----HcCCccCCCChHHEEEeCCC-E
Confidence 35789999999999988732 222 24569999999999 78999999999999999998 9
Q ss_pred EEeeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHH
Q 003855 642 HVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 698 (791)
Q Consensus 642 kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ell 698 (791)
+++|||........... ..+.....+..++|+||||+++.-..
T Consensus 174 ~liDfg~~~~~~e~~a~--------------d~~vler~y~~~~di~~lg~~~~~~~ 216 (232)
T PRK10359 174 RIIDLSGKRCTAQRKAK--------------DRIDLERHYGIKNEIKDLGYYLLIYK 216 (232)
T ss_pred EEEECCCcccccchhhH--------------HHHHHHhHhcccccccceeEeehHHH
Confidence 99999988654221110 00334445667999999999877554
No 432
>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c
Probab=99.82 E-value=3.8e-20 Score=178.93 Aligned_cols=140 Identities=19% Similarity=0.190 Sum_probs=108.6
Q ss_pred ccccCCCcceEEEEEEecCCcEEEEEEeehhhhH--H------------------------HHHHHHHHHHHHhccCCcc
Q 003855 506 CNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLER--A------------------------FRSFDSECEVLRNVRHRNL 559 (791)
Q Consensus 506 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~------------------------~~~~~~e~~~l~~l~h~ni 559 (791)
...||+|+||.||+|...+|+.||||+++..... . ......|++.+.++.++++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vAvKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~v 81 (190)
T cd05147 2 NGCISTGKEANVYHATTANGEERAIKIYKTSILVFKDRDRYVSGEFRFRHGYCKSNPRKMVRTWAEKEMRNLKRLVTAGI 81 (190)
T ss_pred CCccccccceEEEEEECCCCCEEEEEEEEecccccccHHHhhcCCchhhccccCCCHHHHHHHHHHHHHHHHHHHHHCCC
Confidence 4689999999999999888999999998654210 0 1123459999999988877
Q ss_pred ceeeeeeccCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC
Q 003855 560 IKILSSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM 639 (791)
Q Consensus 560 v~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~ 639 (791)
.....+.. ...++||||++++++....... ..++......++.|++.+|.|+|+ ..+|+||||||+||+++ ++
T Consensus 82 ~~p~~~~~--~~~~iVmE~i~g~~l~~~~~~~-~~~~~~~~~~i~~qi~~~L~~l~H---~~giiHrDlkP~NIli~-~~ 154 (190)
T cd05147 82 PCPEPILL--KSHVLVMEFIGDDGWAAPRLKD-APLSESKARELYLQVIQIMRILYQ---DCRLVHADLSEYNLLYH-DG 154 (190)
T ss_pred CCCcEEEe--cCCEEEEEEeCCCCCcchhhhc-CCCCHHHHHHHHHHHHHHHHHHHH---hCCcccCCCCHHHEEEE-CC
Confidence 54433322 2238999999988776553333 348889999999999999999942 56899999999999998 47
Q ss_pred cEEEeeecccccc
Q 003855 640 AAHVSDFGISKLL 652 (791)
Q Consensus 640 ~~kl~Dfgla~~~ 652 (791)
.++++|||+|...
T Consensus 155 ~v~LiDFG~a~~~ 167 (190)
T cd05147 155 KLYIIDVSQSVEH 167 (190)
T ss_pred cEEEEEccccccC
Confidence 8999999999754
No 433
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.81 E-value=1.4e-21 Score=172.44 Aligned_cols=177 Identities=30% Similarity=0.475 Sum_probs=131.7
Q ss_pred cCCCceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEe
Q 003855 238 LKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLD 317 (791)
Q Consensus 238 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~ 317 (791)
+.+++.|.||+|+++ .+|..++.+.+|+.|++++|+|+ ..|.+++.+++|+.|+++-|++. ..|..|+.++.|+.||
T Consensus 32 ~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levld 108 (264)
T KOG0617|consen 32 MSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVLD 108 (264)
T ss_pred hhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhhh
Confidence 444455555555555 44445666666666666666665 45666666666666666666664 6677777777777777
Q ss_pred cCCcccCC-CCCcchhccccccccccccccCCCCCCcccCCCCCCcEEEccCCccCCCCchhhhhcccCceEEccCCCCc
Q 003855 318 LSRNQLSG-DIPSTIGALKDLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQLKQFNVSHNRLE 396 (791)
Q Consensus 318 l~~N~l~~-~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~ 396 (791)
|++|.+.. .+|..|..+..|+.|+|++|.+. .+|..++++.+|+.|.+.+|.+- .+|..++.+..|++|.+.+|+++
T Consensus 109 ltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnrl~ 186 (264)
T KOG0617|consen 109 LTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNRLT 186 (264)
T ss_pred ccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccceee
Confidence 77777653 57888889999999999999998 88999999999999999999998 88999999999999999999999
Q ss_pred ccCCCCCCCcCCc---cccccCCccc
Q 003855 397 GEIPVKGSFKNFS---VESFFGNYAL 419 (791)
Q Consensus 397 ~~~~~~~~~~~l~---~~~~~~n~~~ 419 (791)
-.+|+.+.+.-+. ......|||.
T Consensus 187 vlppel~~l~l~~~k~v~r~E~NPwv 212 (264)
T KOG0617|consen 187 VLPPELANLDLVGNKQVMRMEENPWV 212 (264)
T ss_pred ecChhhhhhhhhhhHHHHhhhhCCCC
Confidence 9999876654432 2334556654
No 434
>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro
Probab=99.80 E-value=4.6e-19 Score=172.38 Aligned_cols=141 Identities=21% Similarity=0.234 Sum_probs=110.8
Q ss_pred ccccCCCcceEEEEEEecCCcEEEEEEeehhhhH--------------------------HHHHHHHHHHHHHhccCCcc
Q 003855 506 CNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLER--------------------------AFRSFDSECEVLRNVRHRNL 559 (791)
Q Consensus 506 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--------------------------~~~~~~~e~~~l~~l~h~ni 559 (791)
...||+|+||.||+|+..+|+.||||++...... ....+..|.+.+.++.|+++
T Consensus 2 ~~~ig~G~~~~Vy~a~~~~g~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i 81 (190)
T cd05145 2 NGCISTGKEANVYHARTGDGEELAVKIYKTSTLSFKDRDKYIEGDPRFRSRYSKSNPRKLVFAWAEKEFRNLKRLYEAGV 81 (190)
T ss_pred CceeecCCCcEEEEEEcCCCCEEEEEEEEcCcceEeeHHHHhcCCcccccccccCCHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999878999999998754210 01234678999999999987
Q ss_pred ceeeeeeccCCeeeEEEecCCCCCHHHH-HhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC
Q 003855 560 IKILSSCSNPDFKALVLEFMPNGSLEKW-LYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN 638 (791)
Q Consensus 560 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~ 638 (791)
.....+... ..++||||++++++... +.. ..++..+..+++.+++.++.++|+ ..+|+||||||+||+++ +
T Consensus 82 ~~p~~~~~~--~~~lVmE~~~g~~~~~~~l~~--~~~~~~~~~~i~~~l~~~l~~lH~---~~givHrDlkP~NIll~-~ 153 (190)
T cd05145 82 PVPEPILLK--KNVLVMEFIGDDGSPAPRLKD--VPLEEEEAEELYEQVVEQMRRLYQ---EAGLVHGDLSEYNILYH-D 153 (190)
T ss_pred CCceEEEec--CCEEEEEEecCCCchhhhhhh--ccCCHHHHHHHHHHHHHHHHHHHH---hCCEecCCCChhhEEEE-C
Confidence 555444332 24899999998865443 332 236788899999999999999993 27999999999999999 8
Q ss_pred CcEEEeeeccccccCC
Q 003855 639 MAAHVSDFGISKLLGE 654 (791)
Q Consensus 639 ~~~kl~Dfgla~~~~~ 654 (791)
+.++|+|||+|+....
T Consensus 154 ~~~~liDFG~a~~~~~ 169 (190)
T cd05145 154 GKPYIIDVSQAVELDH 169 (190)
T ss_pred CCEEEEEcccceecCC
Confidence 9999999999987643
No 435
>PRK12274 serine/threonine protein kinase; Provisional
Probab=99.80 E-value=5.4e-19 Score=167.85 Aligned_cols=188 Identities=16% Similarity=0.102 Sum_probs=139.3
Q ss_pred ccccccCCCcceEEEEEEecCCcEEEEEEeehhhh---H-HHHHHHHHHHHHHhcc-CCccceeeeeeccCCeeeEEEec
Q 003855 504 NECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLE---R-AFRSFDSECEVLRNVR-HRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 504 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~---~-~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
.+...+++|+||+||.+.. .+++++.+.+..... . ....+.+|+++|+++. |+++++++++ +..+++|||
T Consensus 5 ~~~~~l~~~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~----~~~~lvmey 79 (218)
T PRK12274 5 AVNEPLKSDTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW----DGRHLDRSY 79 (218)
T ss_pred ccceeecCCCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE----cCEEEEEee
Confidence 3567899999999997665 678888777765432 1 1235789999999995 5889999886 346899999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCC-CCCCeEeCCCCcEEEeeeccccccCCCCC
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDL-KPTNILLDENMAAHVSDFGISKLLGEGED 657 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dl-k~~Nill~~~~~~kl~Dfgla~~~~~~~~ 657 (791)
++|.+|.+.... ....++.|+++++.++| ..+|+|||| ||+||++++++.++|+|||+|....+...
T Consensus 80 I~G~~L~~~~~~--------~~~~~~~qi~~~L~~lH----~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~ 147 (218)
T PRK12274 80 LAGAAMYQRPPR--------GDLAYFRAARRLLQQLH----RCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRAR 147 (218)
T ss_pred ecCccHHhhhhh--------hhHHHHHHHHHHHHHHH----HCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcch
Confidence 999998764321 12347789999999999 789999999 79999999999999999999986544332
Q ss_pred cc---e--------eecccccccccCCCccCC-CCCC-ccccHHhHHHHHHHHHhCCCCCCccc
Q 003855 658 SV---T--------QTMTMATIGYMAPEYGSE-GIVS-AKCDVYSYGVLLMETFTRKRPTDEMF 708 (791)
Q Consensus 658 ~~---~--------~~~~~g~~~y~aPE~~~~-~~~~-~~~Dv~s~G~vl~elltg~~p~~~~~ 708 (791)
.. . ......++.|++|+-..- ...+ ...+.++-|.-+|.++||..+.....
T Consensus 148 ~~r~L~~rDl~~llk~~~~y~~~~l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~ 211 (218)
T PRK12274 148 WMRLLAREDLRHLLKHKRMYCPAALTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN 211 (218)
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence 10 0 111235677777773211 1122 46799999999999999999865533
No 436
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.79 E-value=5e-21 Score=203.90 Aligned_cols=210 Identities=28% Similarity=0.361 Sum_probs=118.3
Q ss_pred cccCCCCCCEEEccCCccccccCccccCCCC---CCEEEcccccCcc----cCCcccccc-CCCceEEecCCccCCC---
Q 003855 186 EIGNLSGLTLLSLHSNDLNGTISPTMGRLKR---LQGLSLRNNNLEG----SIPYDLCHL-KLMFGIRLTGNKLSGH--- 254 (791)
Q Consensus 186 ~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~---L~~L~L~~N~l~~----~~~~~~~~l-~~L~~L~L~~N~i~~~--- 254 (791)
.+..+++|+.|++++|.+....+..+..+.+ |++|++++|++++ .+...+..+ ++|+.|++++|.+++.
T Consensus 76 ~l~~~~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~~l~~~l~~~~~~L~~L~L~~n~l~~~~~~ 155 (319)
T cd00116 76 GLTKGCGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLRLLAKGLKDLPPALEKLVLGRNRLEGASCE 155 (319)
T ss_pred HHHhcCceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHHHHHHHHHhCCCCceEEEcCCCcCCchHHH
Confidence 3444555555555555554333333333333 5566665555542 111223334 5556666666655521
Q ss_pred -CCccccCCCCCcEEEcCCCcCCCC----CCccccCCCCCCeEEccCCcCccc----CCcccccCCCCCEEecCCcccCC
Q 003855 255 -IPPCLVSLTSLRELHLGSNKLTSS----IPSSLWSLEYILDINLSSNSLNDS----LPSNVQKLKVLTVLDLSRNQLSG 325 (791)
Q Consensus 255 -~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~l~~N~i~~~----~~~~~~~l~~L~~L~l~~N~l~~ 325 (791)
++..+..+++|++|++++|.+++. ++..+..+++|++|++++|.+++. ++..+..+++|+.|++++|.+++
T Consensus 156 ~~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~ 235 (319)
T cd00116 156 ALAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTD 235 (319)
T ss_pred HHHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCch
Confidence 233445556666667666666532 222334445677777777766533 22345566777777777777764
Q ss_pred CCCcchhc-----cccccccccccccCCC----CCCcccCCCCCCcEEEccCCccCCC----Cchhhhhc-ccCceEEcc
Q 003855 326 DIPSTIGA-----LKDLETLSLARNQFQG----PIPESVGSLISLESLDLSGNNLSGK----IPKSLETL-SQLKQFNVS 391 (791)
Q Consensus 326 ~~~~~~~~-----l~~L~~L~L~~N~l~~----~~~~~~~~l~~L~~L~l~~N~l~~~----~~~~~~~l-~~L~~l~l~ 391 (791)
.....+.. .+.|+.|++++|.++. .+...+..+++|+.+++++|.++.. ....+... +.|+++++.
T Consensus 236 ~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (319)
T cd00116 236 AGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVK 315 (319)
T ss_pred HHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccC
Confidence 33333322 2677788888887752 2334455567888888888888754 34445455 677888887
Q ss_pred CCCC
Q 003855 392 HNRL 395 (791)
Q Consensus 392 ~N~l 395 (791)
+|++
T Consensus 316 ~~~~ 319 (319)
T cd00116 316 DDSF 319 (319)
T ss_pred CCCC
Confidence 7764
No 437
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.79 E-value=2.4e-21 Score=170.83 Aligned_cols=165 Identities=30% Similarity=0.506 Sum_probs=115.5
Q ss_pred ccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecCCccCCCCCccccCCCCCc
Q 003855 187 IGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLSGHIPPCLVSLTSLR 266 (791)
Q Consensus 187 ~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~ 266 (791)
+.++++++.|-|++|+++ .+|+.++.+.+|+.|++++|+|+ ..|..++.+++|+.|+++-|++. ..|..|+.++.|+
T Consensus 29 Lf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~le 105 (264)
T KOG0617|consen 29 LFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALE 105 (264)
T ss_pred ccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhh
Confidence 445667777778888877 56667777778888888888877 66777777777777777777776 6677777777777
Q ss_pred EEEcCCCcCCC-CCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccccccc
Q 003855 267 ELHLGSNKLTS-SIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARN 345 (791)
Q Consensus 267 ~L~L~~N~l~~-~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N 345 (791)
.|||++|.+.. ..|..|..++.|+.|+|+.|.+. .+|..++++++|+.|.+..|.+. .+|..++.+..|++|.+.+|
T Consensus 106 vldltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgn 183 (264)
T KOG0617|consen 106 VLDLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGN 183 (264)
T ss_pred hhhccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhhhcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccc
Confidence 77777777753 35666666777777777777764 56666777777777777777666 56666666666666666666
Q ss_pred cCCCCCCcccCC
Q 003855 346 QFQGPIPESVGS 357 (791)
Q Consensus 346 ~l~~~~~~~~~~ 357 (791)
+++ .+|..+++
T Consensus 184 rl~-vlppel~~ 194 (264)
T KOG0617|consen 184 RLT-VLPPELAN 194 (264)
T ss_pred eee-ecChhhhh
Confidence 666 55555544
No 438
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.79 E-value=8.5e-21 Score=202.15 Aligned_cols=285 Identities=24% Similarity=0.304 Sum_probs=144.7
Q ss_pred eeecCCCccc-ccCCccccCCCCCcEEeCCCCcCcc----cCCchhhhcCCCccEEEccCCccee------cCCccCcCC
Q 003855 17 YLVFAENNLS-GLVPPTIFNISTMRILTLEGNQLSG----RLPSTVGHLLPNIESLLLAANNLTG------IIPHSITNA 85 (791)
Q Consensus 17 ~L~Ls~n~l~-~~~~~~~~~l~~L~~L~L~~n~l~~----~~p~~~~~~l~~L~~L~L~~N~l~~------~~~~~~~~l 85 (791)
.|+|+.+.++ ...+..|..+.+|++|+++++.+++ .++..+.. .++|++|+++++.+.+ .++..+..+
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~-~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~ 80 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRP-QPSLKELCLSLNETGRIPRGLQSLLQGLTKG 80 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhh-CCCceEEeccccccCCcchHHHHHHHHHHhc
Confidence 4666777765 3344555666777778887777742 23333333 4567777777776652 223455666
Q ss_pred CCCCEEeccCcccccccccccccccc---ccccccccccccccCCCccccccccccCCC-CCCcEEEccCCCCcccCChh
Q 003855 86 TKLVALDLGFNSFAGHILNTFGNLRH---LSLLSQVMNNLTTESSSADQWSFLSSLTNC-RNLTILSFGSNPLGGILPPV 161 (791)
Q Consensus 86 ~~L~~L~L~~N~i~~~~~~~~~~l~~---L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l-~~L~~L~L~~N~l~~~~~~~ 161 (791)
++|++|+|++|.+....+..|..+.+ |+.|++++|+++..... .....+..+ ++|+.|++++|.+++.....
T Consensus 81 ~~L~~L~l~~~~~~~~~~~~~~~l~~~~~L~~L~ls~~~~~~~~~~----~l~~~l~~~~~~L~~L~L~~n~l~~~~~~~ 156 (319)
T cd00116 81 CGLQELDLSDNALGPDGCGVLESLLRSSSLQELKLNNNGLGDRGLR----LLAKGLKDLPPALEKLVLGRNRLEGASCEA 156 (319)
T ss_pred CceeEEEccCCCCChhHHHHHHHHhccCcccEEEeeCCccchHHHH----HHHHHHHhCCCCceEEEcCCCcCCchHHHH
Confidence 67777777777766444444444333 55555555544421100 011123333 44555555555444211111
Q ss_pred hhhhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCccccc----cCccccCCCCCCEEEcccccCcccCCccccc
Q 003855 162 IGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGT----ISPTMGRLKRLQGLSLRNNNLEGSIPYDLCH 237 (791)
Q Consensus 162 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~----~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 237 (791)
++..+..+++|+.|++++|.+++. .+..+..+++|++|+|++|.+++....
T Consensus 157 ---------------------~~~~~~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~---- 211 (319)
T cd00116 157 ---------------------LAKALRANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGAS---- 211 (319)
T ss_pred ---------------------HHHHHHhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHH----
Confidence 112233344455555555554421 111223334444444444444321111
Q ss_pred cCCCceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCCCCcccc-----CCCCCCeEEccCCcCcc----cCCcccc
Q 003855 238 LKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLW-----SLEYILDINLSSNSLND----SLPSNVQ 308 (791)
Q Consensus 238 l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~-----~l~~L~~L~l~~N~i~~----~~~~~~~ 308 (791)
.++..+..+++|++|++++|.+++.....+. ..+.|+.|++++|.+++ .+...+.
T Consensus 212 ----------------~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~ 275 (319)
T cd00116 212 ----------------ALAETLASLKSLEVLNLGDNNLTDAGAAALASALLSPNISLLTLSLSCNDITDDGAKDLAEVLA 275 (319)
T ss_pred ----------------HHHHHhcccCCCCEEecCCCcCchHHHHHHHHHHhccCCCceEEEccCCCCCcHHHHHHHHHHh
Confidence 1223344556666666666666532222221 23567777777777652 2233455
Q ss_pred cCCCCCEEecCCcccCCC----CCcchhcc-ccccccccccccC
Q 003855 309 KLKVLTVLDLSRNQLSGD----IPSTIGAL-KDLETLSLARNQF 347 (791)
Q Consensus 309 ~l~~L~~L~l~~N~l~~~----~~~~~~~l-~~L~~L~L~~N~l 347 (791)
.+++|+.+++++|.++.. ....+... +.|+.|++.+|.+
T Consensus 276 ~~~~L~~l~l~~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (319)
T cd00116 276 EKESLLELDLRGNKFGEEGAQLLAESLLEPGNELESLWVKDDSF 319 (319)
T ss_pred cCCCccEEECCCCCCcHHHHHHHHHHHhhcCCchhhcccCCCCC
Confidence 567788888888888754 23333344 6778888877754
No 439
>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A.
Probab=99.79 E-value=2.2e-19 Score=180.09 Aligned_cols=231 Identities=20% Similarity=0.263 Sum_probs=148.0
Q ss_pred ccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccC----------Cccceeeeeec
Q 003855 502 EFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRH----------RNLIKILSSCS 567 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h----------~niv~l~~~~~ 567 (791)
.+...+.||.|+|+.||.+++. +++++|||++.... ....+.+++|.-....+.+ -.++..++...
T Consensus 13 ~l~~~~~i~~g~~~~v~~v~d~~t~~~~avkvf~~~~~~~~~~~~~~~~e~l~~~~~~~~~~p~~a~~~~r~l~P~d~~~ 92 (288)
T PF14531_consen 13 TLVRGRIIGKGGFSIVFEVTDVETGEEFAVKVFLLPADASANEYEQLKEEQLAITLFPGVKNPKEAYRHLRFLVPLDLLR 92 (288)
T ss_dssp EEEEEEEEEEETTEEEEEEEETTTTEEEEEEEEEESSTTHTTHHHHHHHHHHGGGGSTT--SHHHHHHHH-B---SEEEE
T ss_pred EEEEccccccCCceEEEEEEEccCCceEEEEEEecccccchHHHHHHHHHHHHhhhhccCCCHHHHHHhceEEeeeEEEE
Confidence 3456778999999999999975 68999999885432 3456677776655544322 11222222211
Q ss_pred ---------cC---C-----eeeEEEecCCCCCHHHHHh---hCC---CCCCHHHHHHHHHHHHHHHHHHHccCCCCCeE
Q 003855 568 ---------NP---D-----FKALVLEFMPNGSLEKWLY---SHN---YFLDILERLNIMIDVGSALEYLHHGHSSAPII 624 (791)
Q Consensus 568 ---------~~---~-----~~~lv~e~~~~g~L~~~l~---~~~---~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~ 624 (791)
.. . ..+++|+-+ .+||.+++. ... .......+..+..|+.+.+++|| +.+++
T Consensus 93 i~~~~~~~~~~~~~~~~~v~n~~~l~P~~-~~dL~~~~~~l~~~~~~~~~l~~~arl~lT~Q~I~lvA~Lh----~~GlV 167 (288)
T PF14531_consen 93 IPGKPPFFERGPGQSIYWVLNRFLLMPRA-QGDLQDLVEALFSRAQTHSPLAFAARLSLTVQMIRLVANLH----SYGLV 167 (288)
T ss_dssp ETTS-SEEEECETTEEEEEESEEEEEE---SEEHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHH----HTTEE
T ss_pred EcCCCcceecCCCCccceeehhhhccchh-hhcHHHHHHHHhhcccccchhHHHHHHHHHHHHHHHHHHHh----hcceE
Confidence 11 1 225678877 569988865 221 12344556677789999999999 78999
Q ss_pred ecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCC--------CCCCccccHHhHHHHHHH
Q 003855 625 HCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSE--------GIVSAKCDVYSYGVLLME 696 (791)
Q Consensus 625 H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~--------~~~~~~~Dv~s~G~vl~e 696 (791)
|+||+|+|++++++|.+.|+||+.....+.. ......+..|.+||.... ..++.+.|.|++|+++|.
T Consensus 168 Hgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~-----~~~~~~~~~~~PPe~~~~~~~~~~~~~~~t~~~DaW~LG~~ly~ 242 (288)
T PF14531_consen 168 HGDIKPENFLLDQDGGVFLGDFSSLVRAGTR-----YRCSEFPVAFTPPELESCAGQFGQNNAPYTFATDAWQLGITLYS 242 (288)
T ss_dssp EST-SGGGEEE-TTS-EEE--GGGEEETTEE-----EEGGGS-TTTS-HHHHHHHTSCHHSEEEE-HHHHHHHHHHHHHH
T ss_pred ecccceeeEEEcCCCCEEEcChHHHeecCce-----eeccCCCcccCChhhhhhhcccCcccceeeeccCHHHHHHHHHH
Confidence 9999999999999999999999888764321 111334578999996533 357889999999999999
Q ss_pred HHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCC
Q 003855 697 TFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMR 766 (791)
Q Consensus 697 lltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~R 766 (791)
|++|+.||+.......... .+....+.++.+.++|..+++.+|++|
T Consensus 243 lWC~~lPf~~~~~~~~~~~------------------------~f~~C~~~Pe~v~~LI~~lL~~~~~~R 288 (288)
T PF14531_consen 243 LWCGRLPFGLSSPEADPEW------------------------DFSRCRDMPEPVQFLIRGLLQRNPEDR 288 (288)
T ss_dssp HHHSS-STCCCGGGSTSGG------------------------GGTTSS---HHHHHHHHHHT-SSGGGS
T ss_pred HHHccCCCCCCCccccccc------------------------cchhcCCcCHHHHHHHHHHccCCcccC
Confidence 9999999986433211100 111222567788899999999999988
No 440
>KOG1240 consensus Protein kinase containing WD40 repeats [Signal transduction mechanisms]
Probab=99.78 E-value=8.6e-20 Score=202.97 Aligned_cols=249 Identities=21% Similarity=0.233 Sum_probs=176.6
Q ss_pred ccccccccCCCcceEEEEEEecCCcEEEEEEeehhh-hH---HHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEe
Q 003855 502 EFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQL-ER---AFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLE 577 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~-~~---~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e 577 (791)
++...+.+|.+.|=.|.+|+.+.|. |+||++-+.. .- .+.+-..|++ ...++|||.+.+.-+-......|+|-+
T Consensus 24 e~~~~~~LGstRFlKv~r~k~~eG~-vVvKVFvk~~p~~sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~~t~kAAylvRq 101 (1431)
T KOG1240|consen 24 ECHYVENLGSTRFLKVARAKDREGL-VVVKVFVKQDPTISLRPFKQRLEEIK-FALMKAPNCLPFQKVLVTDKAAYLVRQ 101 (1431)
T ss_pred ceeeecccCchhhhhhhhccCCCce-EEEEEEeccCCCCCchHHHHHHHHHH-HHhhcCCcccchHHHHHhhHHHHHHHH
Confidence 6777889999999999999998887 9999986654 22 2233333444 555689999999888777788889999
Q ss_pred cCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc--CCC
Q 003855 578 FMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL--GEG 655 (791)
Q Consensus 578 ~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~--~~~ 655 (791)
|+.+ +|.|.+..+. ++...+.+.|++|+..|+..+| ..+|+|||||.+|||+++=.=+.|+||..-+.. .++
T Consensus 102 yvkh-nLyDRlSTRP-FL~~iEKkWiaFQLL~al~qcH----~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeD 175 (1431)
T KOG1240|consen 102 YVKH-NLYDRLSTRP-FLVLIEKKWIAFQLLKALSQCH----KLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPED 175 (1431)
T ss_pred HHhh-hhhhhhccch-HHHHHHHHHHHHHHHHHHHHHH----HcCccccccccceEEEeeechhhhhcccccCCccCCCC
Confidence 9966 9999997654 4777888889999999999999 789999999999999998878899999654322 111
Q ss_pred CC---cceeecccccccccCCCccCC----------CC-CCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHH
Q 003855 656 ED---SVTQTMTMATIGYMAPEYGSE----------GI-VSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKE 720 (791)
Q Consensus 656 ~~---~~~~~~~~g~~~y~aPE~~~~----------~~-~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~ 720 (791)
.. .........-..|+|||.+-. .. .+++=||||.|||++|+++ |++||.- .+...-
T Consensus 176 NPadf~fFFDTSrRRtCYiAPERFv~~~~~~~~~q~~~~L~paMDIFS~GCViaELf~Eg~PlF~L--------SQL~aY 247 (1431)
T KOG1240|consen 176 NPADFTFFFDTSRRRTCYIAPERFVSALGKTSVGQDAPLLTPAMDIFSAGCVIAELFLEGRPLFTL--------SQLLAY 247 (1431)
T ss_pred CcccceEEEecCCceeeecChHhhhccccccccCCcccccChhhhhhhhhHHHHHHHhcCCCcccH--------HHHHhH
Confidence 11 111111112235999995322 11 5678899999999999998 6777753 111110
Q ss_pred hcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHH
Q 003855 721 SLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLK 777 (791)
Q Consensus 721 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~ 777 (791)
.... -.+++...+. . ....+..++..|++.||++|.++.+.++.-+
T Consensus 248 r~~~----~~~~e~~Le~-----I--ed~~~Rnlil~Mi~rdPs~RlSAedyL~~yr 293 (1431)
T KOG1240|consen 248 RSGN----ADDPEQLLEK-----I--EDVSLRNLILSMIQRDPSKRLSAEDYLQKYR 293 (1431)
T ss_pred hccC----ccCHHHHHHh-----C--cCccHHHHHHHHHccCchhccCHHHHHHhhh
Confidence 0000 1111111110 0 0124678999999999999999999998743
No 441
>KOG4158 consensus BRPK/PTEN-induced protein kinase [Signal transduction mechanisms]
Probab=99.78 E-value=4e-19 Score=177.00 Aligned_cols=195 Identities=26% Similarity=0.319 Sum_probs=138.8
Q ss_pred cCCccceeeeeecc---------------------------CCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHH
Q 003855 555 RHRNLIKILSSCSN---------------------------PDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDV 607 (791)
Q Consensus 555 ~h~niv~l~~~~~~---------------------------~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i 607 (791)
+|||||++.++|.+ +...|+||...+. +|.+|+..+. .+.....-|+.|+
T Consensus 274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~-tLr~yl~~~~--~s~r~~~~~laQl 350 (598)
T KOG4158|consen 274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQ-TLREYLWTRH--RSYRTGRVILAQL 350 (598)
T ss_pred CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchh-hHHHHHhcCC--CchHHHHHHHHHH
Confidence 59999999877632 3467899998855 9999998765 4555667789999
Q ss_pred HHHHHHHHccCCCCCeEecCCCCCCeEe--CCCCc--EEEeeeccccccCCC----CCcceeecccccccccCCCccCCC
Q 003855 608 GSALEYLHHGHSSAPIIHCDLKPTNILL--DENMA--AHVSDFGISKLLGEG----EDSVTQTMTMATIGYMAPEYGSEG 679 (791)
Q Consensus 608 ~~~l~~LH~~~~~~~i~H~dlk~~Nill--~~~~~--~kl~Dfgla~~~~~~----~~~~~~~~~~g~~~y~aPE~~~~~ 679 (791)
++|+.||| .++|.|||+|++|||+ |+|+. ..|+|||.+---... ......-...|...-||||+....
T Consensus 351 LEav~hL~----~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~lmAPEi~ta~ 426 (598)
T KOG4158|consen 351 LEAVTHLH----KHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKLMAPEIATAV 426 (598)
T ss_pred HHHHHHHH----HccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCcceecchhhhhcC
Confidence 99999999 7899999999999998 44444 678999987432111 011111223466779999975432
Q ss_pred --C----CCccccHHhHHHHHHHHHhCCCCCCccccCcchH--HHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHH
Q 003855 680 --I----VSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSL--RRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSI 751 (791)
Q Consensus 680 --~----~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~--~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l 751 (791)
+ .-.|+|.|+.|.+.||+++...||.. .+++.+ +.+-. ..-..-+..|++.+
T Consensus 427 PGp~avvny~kAD~WA~GalaYEIfg~~NPFY~--rGem~L~~r~Yqe------------------~qLPalp~~vpp~~ 486 (598)
T KOG4158|consen 427 PGPNAVVNYEKADTWAAGALAYEIFGRSNPFYK--RGEMLLDTRTYQE------------------SQLPALPSRVPPVA 486 (598)
T ss_pred CCCceeeccchhhhhhhhhhHHHHhccCCcccc--cchheechhhhhh------------------hhCCCCcccCChHH
Confidence 2 23489999999999999999999976 233222 11100 00111233577888
Q ss_pred HHHHhhccccCCCCCCCHHHHHHHH
Q 003855 752 MDLALDCCIESPDMRINVTDAAAKL 776 (791)
Q Consensus 752 ~~li~~cl~~~P~~RPt~~ev~~~L 776 (791)
.+++...++.||++|++..-+...+
T Consensus 487 rqlV~~lL~r~pskRvsp~iAANvl 511 (598)
T KOG4158|consen 487 RQLVFDLLKRDPSKRVSPNIAANVL 511 (598)
T ss_pred HHHHHHHhcCCccccCCccHHHhHH
Confidence 9999999999999999987665554
No 442
>KOG0603 consensus Ribosomal protein S6 kinase [Signal transduction mechanisms]
Probab=99.78 E-value=2.4e-20 Score=198.10 Aligned_cols=225 Identities=24% Similarity=0.296 Sum_probs=174.3
Q ss_pred ccCCCcceEEEEEE----ecCCcEEEEEEeehhhh--HHHHHHHHHHHHHHhcc-CCccceeeeeeccCCeeeEEEecCC
Q 003855 508 LLGTGSFGSVYKGT----ISDGTDVAIKIFNLQLE--RAFRSFDSECEVLRNVR-HRNLIKILSSCSNPDFKALVLEFMP 580 (791)
Q Consensus 508 ~ig~G~~g~Vy~~~----~~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~lv~e~~~ 580 (791)
.+|+|.||.|+.++ .+.|+.+|.|+.++... ........|..++...+ ||.++++..+++.+...+++.+|..
T Consensus 1 vlg~g~~gkvfLvrk~~g~da~~~yamkvl~k~t~~~~~~~~t~~er~il~~~~~~~f~v~lhyafqt~~kl~l~ld~~r 80 (612)
T KOG0603|consen 1 VLGQGSYGKVFLVRKAGGADAGHLYAMKVLKKATLKVRDRTHTKQERIILAFVHNTPFLVKLHYAFQTDGKLYLILDFLR 80 (612)
T ss_pred CCCcCCCcchHHHHHhccccccchhhhhcccccccccccccccccHHHHHhhccCCCceeeeeeeeccccchhHhhhhcc
Confidence 37899999998764 23577788888765431 11125566788888886 9999999999999999999999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT 660 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~ 660 (791)
+|++...+..... ++..........++-|++++| +.+|+|||+|++||+++.+|++++.|||+++..-....
T Consensus 81 gg~lft~l~~~~~-f~~~~~~~~~aelaLald~lh----~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~--- 152 (612)
T KOG0603|consen 81 GGDLFTRLSKEVM-FDELDVAFYLAELALALDHLH----KLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKI--- 152 (612)
T ss_pred cchhhhccccCCc-hHHHHHHHHHHHHHHHHhhcc----hhHHHHhcccccceeecccCccccCCchhhhHhHhhhh---
Confidence 9999998876654 566666777788999999999 78999999999999999999999999999987543222
Q ss_pred eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHh
Q 003855 661 QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQA 740 (791)
Q Consensus 661 ~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 740 (791)
.+||..|||||+.. .....+|.||||++++||+||..||.. ....+ +... .
T Consensus 153 ---~cgt~eymApEI~~--gh~~a~D~ws~gvl~felltg~~pf~~-----~~~~~-----------------Il~~--~ 203 (612)
T KOG0603|consen 153 ---ACGTYEYRAPEIIN--GHLSAADWWSFGVLAFELLTGTLPFGG-----DTMKR-----------------ILKA--E 203 (612)
T ss_pred ---cccchhhhhhHhhh--ccCCcccchhhhhhHHHHhhCCCCCch-----HHHHH-----------------Hhhh--c
Confidence 17899999999987 456789999999999999999999875 11111 1110 1
Q ss_pred hHHHHHHHHHHHHHHhhccccCCCCCCCH
Q 003855 741 FSAKMDCILSIMDLALDCCIESPDMRINV 769 (791)
Q Consensus 741 ~~~~~~~~~~l~~li~~cl~~~P~~RPt~ 769 (791)
...+.+....+.+++..+...+|.+|...
T Consensus 204 ~~~p~~l~~~a~~~~~~l~~r~p~nrLg~ 232 (612)
T KOG0603|consen 204 LEMPRELSAEARSLFRQLFKRNPENRLGA 232 (612)
T ss_pred cCCchhhhHHHHHHHHHHHhhCHHHHhcc
Confidence 11223445556678888888888888765
No 443
>KOG1166 consensus Mitotic checkpoint serine/threonine protein kinase [Cell cycle control, cell division, chromosome partitioning]
Probab=99.77 E-value=3.3e-18 Score=195.06 Aligned_cols=201 Identities=23% Similarity=0.259 Sum_probs=161.4
Q ss_pred hHHHHHhhccccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhcc---CCccceeeeeeccCC
Q 003855 494 LDIQRATDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVR---HRNLIKILSSCSNPD 570 (791)
Q Consensus 494 ~~~~~~~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~---h~niv~l~~~~~~~~ 570 (791)
.+.+...+.|.+.+.||+|+||.||+|...+|+.||+|+=+...... |---.+++.+|+ -+-|..+..++.-.+
T Consensus 691 ~~~~~~~~~~~I~~e~G~g~y~~vy~a~~~~~~~~alK~e~P~~~WE---fYI~~q~~~RLk~~~~~~~~~~~~a~~~~~ 767 (974)
T KOG1166|consen 691 TEFEVGGEKFCISKEIGEGSYGSVYVATHSNGKLVALKVEKPPNPWE---FYICLQVMERLKPQMLPSIMHISSAHVFQN 767 (974)
T ss_pred ceeeecceeEEEEeeeccccceEEEEeecCCCcEEEEEeecCCCcee---eeehHHHHHhhchhhhcchHHHHHHHccCC
Confidence 34555667899999999999999999998889999999865543221 111123333443 244555666666667
Q ss_pred eeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC-------CCCcEEE
Q 003855 571 FKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD-------ENMAAHV 643 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~-------~~~~~kl 643 (791)
.-++|+||.+.|+|.+++... ...+|.-+..+..|+++.+++|| ..+|||+||||+|.++. +...++|
T Consensus 768 ~S~lv~ey~~~Gtlld~~N~~-~~m~e~lv~~~~~qml~ive~lH----~~~IIHgDiKPDNfll~~~~~~~~~~~~l~l 842 (974)
T KOG1166|consen 768 ASVLVSEYSPYGTLLDLINTN-KVMDEYLVMFFSCQMLRIVEHLH----AMGIIHGDIKPDNFLLRREICADSDSKGLYL 842 (974)
T ss_pred cceeeeeccccccHHHhhccC-CCCCchhhhHHHHHHHHHHHHHH----hcceecccCCcceeEeecccCCCCcccceEE
Confidence 778999999999999999844 44899999999999999999999 77899999999999994 2345899
Q ss_pred eeeccccccCCCCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCC
Q 003855 644 SDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 702 (791)
Q Consensus 644 ~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~ 702 (791)
+|||.+..+..-.+.......++|-++--+|...++.|++.+|-|.++.+++-|+.|+.
T Consensus 843 IDfG~siDm~lfp~~~~F~~~~~td~f~C~EM~~grpWtYq~DyfGlAa~~h~mLFG~y 901 (974)
T KOG1166|consen 843 IDFGRSIDMKLFPDGTKFKAVWHTDLFDCIEMREGRPWTYQIDYFGLAATVHVMLFGKY 901 (974)
T ss_pred EecccceeeeEcCCCcEEeeeeccccchhHHHhcCCCCchhhhhHHHHHHHHHHHHHHH
Confidence 99999987765555555566778999999999999999999999999999999999974
No 444
>PRK10345 hypothetical protein; Provisional
Probab=99.75 E-value=1.2e-17 Score=162.55 Aligned_cols=136 Identities=18% Similarity=0.250 Sum_probs=105.4
Q ss_pred ccccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-----cCCccceeeeeeccCC---e-eeE
Q 003855 504 NECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNV-----RHRNLIKILSSCSNPD---F-KAL 574 (791)
Q Consensus 504 ~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-----~h~niv~l~~~~~~~~---~-~~l 574 (791)
...+.||+|+||.||. ..+....+||++........+.+.+|+.+++++ .||||++++|++.+.. . ..+
T Consensus 5 ~~~~~LG~G~~~~Vy~--hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~~g~g~v~~~ 82 (210)
T PRK10345 5 SEQSPLGTGRHRKCYA--HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETDCGTGYVYDV 82 (210)
T ss_pred CCcceecCCCceEEEE--CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeCCCCeEEEEE
Confidence 3456899999999996 433333479988765444556789999999999 5799999999998763 3 337
Q ss_pred EEec--CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHH-HHHHccCCCCCeEecCCCCCCeEeCC----CCcEEEeeec
Q 003855 575 VLEF--MPNGSLEKWLYSHNYFLDILERLNIMIDVGSAL-EYLHHGHSSAPIIHCDLKPTNILLDE----NMAAHVSDFG 647 (791)
Q Consensus 575 v~e~--~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l-~~LH~~~~~~~i~H~dlk~~Nill~~----~~~~kl~Dfg 647 (791)
|+|| +++|+|.+++.+.. +++. ..++.+++.++ +||| +.+|+||||||+||+++. ++.++|+||+
T Consensus 83 I~e~~G~~~~tL~~~l~~~~--~~e~--~~~~~~~L~~l~~yLh----~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~ 154 (210)
T PRK10345 83 IADFDGKPSITLTEFAEQCR--YEED--VAQLRQLLKKLKRYLL----DNRIVTMELKPQNILCQRISESEVIPVVCDNI 154 (210)
T ss_pred EecCCCCcchhHHHHHHccc--ccHh--HHHHHHHHHHHHHHHH----HCCEeecCCCHHHEEEeccCCCCCcEEEEECC
Confidence 8999 56799999997642 4544 35677888777 9999 678999999999999974 3479999954
Q ss_pred cc
Q 003855 648 IS 649 (791)
Q Consensus 648 la 649 (791)
-+
T Consensus 155 G~ 156 (210)
T PRK10345 155 GE 156 (210)
T ss_pred CC
Confidence 44
No 445
>PRK14879 serine/threonine protein kinase; Provisional
Probab=99.73 E-value=5e-17 Score=161.75 Aligned_cols=134 Identities=23% Similarity=0.364 Sum_probs=113.4
Q ss_pred cccCCCcceEEEEEEecCCcEEEEEEeehhh--------hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 507 NLLGTGSFGSVYKGTISDGTDVAIKIFNLQL--------ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
+.||+|++|.||+|.. +|..|++|+..... ......+..|+.++..+.|+++.....++.+....++||||
T Consensus 2 ~~l~~G~~~~vy~~~~-~~~~~~vK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~ 80 (211)
T PRK14879 2 KLIKRGAEAEIYLGDF-LGIKAVIKWRIPKRYRHPELDERIRRERTRREARIMSRARKAGVNVPAVYFVDPENFIIVMEY 80 (211)
T ss_pred cccccCceEEEEEEee-CCCceEEEEeCCcCCcChHHHHHHHHHHHHHHHHHHHHHHHCCCCCCeEEEEeCCCCEEEEEE
Confidence 5799999999999988 67789999765322 11234577899999999999988877777777788999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
++|++|.+++.... + .+..++.+++.++.++| ..+++|||++|.||+++ ++.++++|||.++.
T Consensus 81 ~~G~~L~~~~~~~~----~-~~~~i~~~i~~~l~~lH----~~~i~H~Dl~p~Nil~~-~~~~~liDf~~a~~ 143 (211)
T PRK14879 81 IEGEPLKDLINSNG----M-EELELSREIGRLVGKLH----SAGIIHGDLTTSNMILS-GGKIYLIDFGLAEF 143 (211)
T ss_pred eCCcCHHHHHHhcc----H-HHHHHHHHHHHHHHHHH----hCCcccCCCCcccEEEE-CCCEEEEECCcccC
Confidence 99999999987532 2 78899999999999999 67899999999999999 78999999998864
No 446
>smart00090 RIO RIO-like kinase.
Probab=99.71 E-value=6.1e-17 Score=162.03 Aligned_cols=141 Identities=20% Similarity=0.171 Sum_probs=110.3
Q ss_pred ccccccccCCCcceEEEEEE--ecCCcEEEEEEeehhhh------------------------HHHHHHHHHHHHHHhcc
Q 003855 502 EFNECNLLGTGSFGSVYKGT--ISDGTDVAIKIFNLQLE------------------------RAFRSFDSECEVLRNVR 555 (791)
Q Consensus 502 ~~~~~~~ig~G~~g~Vy~~~--~~~~~~vavK~~~~~~~------------------------~~~~~~~~e~~~l~~l~ 555 (791)
-|++.+.||+|+||.||+|. ..+|+.||+|++..... .....+..|+..+.++.
T Consensus 29 ~~~i~~~Lg~G~~g~Vy~a~~~~~~g~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~L~~L~ 108 (237)
T smart00090 29 LSAIGGCISTGKEANVYHALDFDGSGKERAVKIYRTGTLEFKRRDRYVDGDFRFKYRKINPRKLVRLWAEKEFRNLQRLY 108 (237)
T ss_pred hHHhCCeeccCcceeEEEEEecCCCCcEEEEEEEEcCcceecchhhhcccchhhccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 47788999999999999998 56899999999864321 01134568999999997
Q ss_pred CCc--cceeeeeeccCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCC-eEecCCCCCC
Q 003855 556 HRN--LIKILSSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAP-IIHCDLKPTN 632 (791)
Q Consensus 556 h~n--iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~-i~H~dlk~~N 632 (791)
+.. +.+++++ ...++||||++++++..+..... .....+...++.|++.++.||| ..+ ++||||||+|
T Consensus 109 ~~~i~~p~~~~~----~~~~lV~E~~~g~~L~~~~~~~~-~~~~~~~~~i~~qi~~~l~~LH----~~g~iiH~Dikp~N 179 (237)
T smart00090 109 EAGVPVPKPIAW----RRNVLVMEFIGGDGLPAPRLKDV-EPEEEEEFELYDDILEEMRKLY----KEGELVHGDLSEYN 179 (237)
T ss_pred hcCCCCCeeeEe----cCceEEEEEecCCcccccccccC-CcchHHHHHHHHHHHHHHHHHH----hcCCEEeCCCChhh
Confidence 533 3444443 23489999999988877653322 3555667889999999999999 678 9999999999
Q ss_pred eEeCCCCcEEEeeecccccc
Q 003855 633 ILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 633 ill~~~~~~kl~Dfgla~~~ 652 (791)
|+++ ++.++++|||.|...
T Consensus 180 Ili~-~~~i~LiDFg~a~~~ 198 (237)
T smart00090 180 ILVH-DGKVVIIDVSQSVEL 198 (237)
T ss_pred EEEE-CCCEEEEEChhhhcc
Confidence 9999 889999999998754
No 447
>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom
Probab=99.69 E-value=2e-16 Score=155.22 Aligned_cols=138 Identities=20% Similarity=0.193 Sum_probs=109.2
Q ss_pred hccccccccCCCcceEEEEEEecCCcEEEEEEeehhhh----------------------HHHHHHHHHHHHHHhccCCc
Q 003855 501 DEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLE----------------------RAFRSFDSECEVLRNVRHRN 558 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~----------------------~~~~~~~~e~~~l~~l~h~n 558 (791)
..|.+.+.||+|+||.||+|...+|+.||||++..... .....+..|..++..+.|++
T Consensus 15 ~~~~~~~~i~~G~~g~Vy~~~~~~g~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~ 94 (198)
T cd05144 15 VVESLGNQIGVGKESDVYLALDPDGNPVALKFHRLGRTSFRKVKRKRDYLGDRKHASWLYLSRLAAQKEFAALKALYEEG 94 (198)
T ss_pred chhhcCCccccCcceEEEEEEcCCCCEEEEEEEecccchhhhhcchHHHHhccccchhHHHhHHHHHHHHHHHHHHHHcC
Confidence 34778899999999999999988899999998754210 01123667888999988774
Q ss_pred --cceeeeeeccCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeC
Q 003855 559 --LIKILSSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLD 636 (791)
Q Consensus 559 --iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~ 636 (791)
+...++. ...++||||+++++|.+.... .....++.+++.++.++| ..+++||||+|+||+++
T Consensus 95 i~v~~~~~~----~~~~lv~e~~~g~~L~~~~~~-------~~~~~~~~~i~~~l~~lh----~~gi~H~Dl~p~Nill~ 159 (198)
T cd05144 95 FPVPKPIDW----NRHAVVMEYIDGVELYRVRVL-------EDPEEVLDEILEEIVKAY----KHGIIHGDLSEFNILVD 159 (198)
T ss_pred CCCCceeec----CCceEEEEEeCCcchhhcccc-------ccHHHHHHHHHHHHHHHH----HCCCCcCCCCcccEEEc
Confidence 4444432 345899999999999775431 245678899999999999 67899999999999999
Q ss_pred CCCcEEEeeeccccccC
Q 003855 637 ENMAAHVSDFGISKLLG 653 (791)
Q Consensus 637 ~~~~~kl~Dfgla~~~~ 653 (791)
+++.++|+|||.+....
T Consensus 160 ~~~~~~liDfg~~~~~~ 176 (198)
T cd05144 160 DDEKIYIIDWPQMVSTD 176 (198)
T ss_pred CCCcEEEEECCccccCC
Confidence 99999999999996543
No 448
>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated
Probab=99.68 E-value=4.5e-16 Score=176.25 Aligned_cols=137 Identities=23% Similarity=0.308 Sum_probs=111.6
Q ss_pred hhccccccccCCCcceEEEEEEecCCcEEEEEEeehh--h------hHHHHHHHHHHHHHHhccCCccceeeeeeccCCe
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQ--L------ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDF 571 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~--~------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~ 571 (791)
...|...+.||+|+||+||+|.+... .+++|+.... . ....+.+.+|++++++++|++++....++.++..
T Consensus 332 ~~~~~~~~~iG~G~~g~Vy~~~~~~~-~~v~k~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~ 410 (535)
T PRK09605 332 KRRKIPDHLIGKGAEADIKKGEYLGR-DAVIKERVPKGYRHPELDERLRTERTRAEARLLSEARRAGVPTPVIYDVDPEE 410 (535)
T ss_pred ccccCccceeccCCcEEEEEEeecCc-cceeEEEecccccchhHHHHHHHHHHHHHHHHHHhhcccCCCeeEEEEEeCCC
Confidence 34556788999999999999987543 4444432211 0 1123568899999999999999988887777777
Q ss_pred eeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 572 KALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 572 ~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
.++||||+++++|.+++. ....++.++++++.||| ..+++|||+||+||++ +++.++|+|||+++.
T Consensus 411 ~~lv~E~~~g~~L~~~l~---------~~~~~~~~i~~~L~~lH----~~giiHrDlkp~NILl-~~~~~~liDFGla~~ 476 (535)
T PRK09605 411 KTIVMEYIGGKDLKDVLE---------GNPELVRKVGEIVAKLH----KAGIVHGDLTTSNFIV-RDDRLYLIDFGLGKY 476 (535)
T ss_pred CEEEEEecCCCcHHHHHH---------HHHHHHHHHHHHHHHHH----hCCCccCCCChHHEEE-ECCcEEEEeCccccc
Confidence 899999999999999886 35678999999999999 6789999999999999 678999999999975
No 449
>TIGR03724 arch_bud32 Kae1-associated kinase Bud32. Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.
Probab=99.67 E-value=4.3e-16 Score=153.39 Aligned_cols=130 Identities=24% Similarity=0.361 Sum_probs=106.8
Q ss_pred ccCCCcceEEEEEEecCCcEEEEEEeehhh--------hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 508 LLGTGSFGSVYKGTISDGTDVAIKIFNLQL--------ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 508 ~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.||+|+||.||+|.+ ++..|++|+..... ....+.+.+|+++++.++|+++.....++...+..++||||+
T Consensus 1 ~ig~G~~~~vy~~~~-~~~~~viK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~i~~p~~~~~~~~~~~lv~e~~ 79 (199)
T TIGR03724 1 LIAKGAEAIIYLGDF-LGLKAVIKERVPKSYRHPELDERIRRERTRNEARLLSRARKAGVNTPVVYDVDPDNKTIVMEYI 79 (199)
T ss_pred CCCCCceEEEEEeec-CCccEEEEEecCCcCcCchHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEEEE
Confidence 489999999999996 67889999864321 112356778999999999887666555555666778999999
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
+|++|.+++..... .++.+++++|.++| ..+++|||++|.||+++ ++.++++|||+++.
T Consensus 80 ~g~~l~~~~~~~~~--------~~~~~i~~~l~~lH----~~gi~H~Dl~~~Nil~~-~~~~~liDfg~a~~ 138 (199)
T TIGR03724 80 EGKPLKDVIEEGND--------ELLREIGRLVGKLH----KAGIVHGDLTTSNIIVR-DDKLYLIDFGLGKY 138 (199)
T ss_pred CCccHHHHHhhcHH--------HHHHHHHHHHHHHH----HCCeecCCCCcceEEEE-CCcEEEEECCCCcC
Confidence 99999998764321 78999999999999 78999999999999999 89999999999865
No 450
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.67 E-value=3.5e-17 Score=182.48 Aligned_cols=213 Identities=23% Similarity=0.270 Sum_probs=145.4
Q ss_pred hccccccccCCCcceEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecC
Q 003855 501 DEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFM 579 (791)
Q Consensus 501 ~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~ 579 (791)
.+|..++.|..|+||.||..+++ +.+.+|.|+=+.. .+.+- ++.....|.+|
T Consensus 83 ~df~~IklisngAygavylvrh~~trqrfa~kiNkq~------lilRn--ilt~a~npfvv------------------- 135 (1205)
T KOG0606|consen 83 SDFNTIKLISNGAYGAVYLVRHKETRQRFAMKINKQN------LILRN--ILTFAGNPFVV------------------- 135 (1205)
T ss_pred cccceeEeeccCCCCceeeeeccccccchhhcccccc------hhhhc--cccccCCccee-------------------
Confidence 67899999999999999999876 5677888542211 00000 22222333333
Q ss_pred CCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC---
Q 003855 580 PNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE--- 656 (791)
Q Consensus 580 ~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~--- 656 (791)
||-...+...+. ++. +++.+++|+| +.+|+|||+||+|.+++.-|.+|++|||+++......
T Consensus 136 --gDc~tllk~~g~-lPv--------dmvla~Eylh----~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atn 200 (1205)
T KOG0606|consen 136 --GDCATLLKNIGP-LPV--------DMVLAVEYLH----SYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATN 200 (1205)
T ss_pred --chhhhhcccCCC-Ccc--------hhhHHhHhhc----cCCeecCCCCCCcceeeecccccccchhhhhhhhhhccch
Confidence 555555554332 222 2278899999 7899999999999999999999999999987532110
Q ss_pred -----C-----cceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCCh
Q 003855 657 -----D-----SVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGL 726 (791)
Q Consensus 657 -----~-----~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~ 726 (791)
. .......+||+.|+|||++....|...+|+|++|+|+||.+.|+.||.+.. .|..+...+...+. +
T Consensus 201 l~eg~I~k~t~Ef~dKqvcgTPeyiaPeVilrqgygkpvdwwamGiIlyeFLVgcvpffGdt-peelfg~visd~i~--w 277 (1205)
T KOG0606|consen 201 LKEGHIEKDTHEFQDKQVCGTPEYIAPEVILRQGYGKPVDWWAMGIILYEFLVGCVPFFGDT-PEELFGQVISDDIE--W 277 (1205)
T ss_pred hhhcchHHHHHHhhhccccCCccccChhhhhhhccCCCccHHHHHHHHHHHheeeeeccCCC-HHHHHhhhhhhhcc--c
Confidence 0 011223479999999999999999999999999999999999999998732 22223332221110 0
Q ss_pred hhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHH
Q 003855 727 TEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDA 772 (791)
Q Consensus 727 ~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev 772 (791)
. +.....+.++.+++.+.++.+|..|--....
T Consensus 278 p--------------E~dea~p~Ea~dli~~LL~qnp~~Rlgt~ga 309 (1205)
T KOG0606|consen 278 P--------------EEDEALPPEAQDLIEQLLRQNPLCRLGTGGA 309 (1205)
T ss_pred c--------------ccCcCCCHHHHHHHHHHHHhChHhhcccchh
Confidence 0 0112344667899999999999999754433
No 451
>KOG1033 consensus eIF-2alpha kinase PEK/EIF2AK3 [Translation, ribosomal structure and biogenesis]
Probab=99.66 E-value=1.9e-17 Score=172.77 Aligned_cols=173 Identities=23% Similarity=0.387 Sum_probs=129.1
Q ss_pred eeeEEEecCCCCCHHHHHhhC--CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecc
Q 003855 571 FKALVLEFMPNGSLEKWLYSH--NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGI 648 (791)
Q Consensus 571 ~~~lv~e~~~~g~L~~~l~~~--~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgl 648 (791)
..++.|++|...+|.+|+..+ ....++.....++.|++.|++| ++.+|||+||.||+...+..+||.|||+
T Consensus 330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~~q~~~~~~y-------k~~ihrdlkp~nif~~~d~q~kIgDFgl 402 (516)
T KOG1033|consen 330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIFKQIAPAVEY-------KGLIHRDLKPSNIFFSDDDQLKIGDFGL 402 (516)
T ss_pred chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHHHhhccchhh-------ccchhhhccccccccccchhhhhhhhhh
Confidence 578999999999999999733 3457888899999999999999 2689999999999999999999999999
Q ss_pred ccccCCCC----CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHh-CCCCCCccccCcchHHHHHHHhcC
Q 003855 649 SKLLGEGE----DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFT-RKRPTDEMFTGEMSLRRWVKESLP 723 (791)
Q Consensus 649 a~~~~~~~----~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ellt-g~~p~~~~~~~~~~~~~~~~~~~~ 723 (791)
........ .....+..+||..||+||.+.+..|+.|+||||+|++++|++. =..+++. ...+.+. .
T Consensus 403 ~ts~~~~~~~~~~~a~~t~~~gt~~YmsPEQi~g~~y~~kvdIyaLGlil~EL~~~f~T~~er----~~t~~d~-----r 473 (516)
T KOG1033|consen 403 VTSQDKDETVAPAAASHTQQVGTLLYMSPEQIRGQQYSEKVDIYALGLILAELLIQFSTQFER----IATLTDI-----R 473 (516)
T ss_pred eeecccCCcccchhhhhhhcccccccCCHHHHhhhhhhhhcchhhHHHHHHHHHHHhccHHHH----HHhhhhh-----h
Confidence 98765544 2234555689999999999999999999999999999999997 2222221 1111110 0
Q ss_pred CChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHH
Q 003855 724 HGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDA 772 (791)
Q Consensus 724 ~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev 772 (791)
...+++.+.. ++ ++-..++.+++.+.|.+||++.++
T Consensus 474 ---~g~ip~~~~~---------d~-p~e~~ll~~lls~~p~~RP~~~~~ 509 (516)
T KOG1033|consen 474 ---DGIIPPEFLQ---------DY-PEEYTLLQQLLSPSPEERPSAIEV 509 (516)
T ss_pred ---cCCCChHHhh---------cC-cHHHHHHHHhcCCCcccCchHHHH
Confidence 0111111111 11 122478999999999999955443
No 452
>KOG0590 consensus Checkpoint kinase and related serine/threonine protein kinases [Cell cycle control, cell division, chromosome partitioning]
Probab=99.58 E-value=1.7e-16 Score=178.38 Aligned_cols=256 Identities=22% Similarity=0.284 Sum_probs=195.3
Q ss_pred hhccccccccCCCcceEEEEEEec--CCcEEEEEEeehhh--hHHHHHHHHHHHHHHhcc-CCccceeeeeeccCCeeeE
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTIS--DGTDVAIKIFNLQL--ERAFRSFDSECEVLRNVR-HRNLIKILSSCSNPDFKAL 574 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~--~~~~~~~~~e~~~l~~l~-h~niv~l~~~~~~~~~~~l 574 (791)
...|...+.||+|+|+.|-..... ....+|+|.+.... .........|..+-..+. |+|++++++...+++..++
T Consensus 19 ~~~~~~~~~ig~gs~~~~~~~~~~~~~~~~~a~~~~s~~~~~~~~~~~i~~e~~~~~~~s~h~n~~~~~~~~~~~~~~~~ 98 (601)
T KOG0590|consen 19 NSQYKLSRSIGKGSFSSSALASNSRDPESSSATKPISIPPKSEDSSEHIDTETDIQKKLSKHSNTVHMIEPSSSPRSYLL 98 (601)
T ss_pred cccccccccccccccchhhhhhhcCCCcceeeccCCCCCCCccchhhhcCccccccccccccccccccCCccCCCccccc
Confidence 346777888999999999887653 34456666554432 333445555777766675 9999999999999999999
Q ss_pred EEecCCCCCHHHHH-hhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC-cEEEeeecccccc
Q 003855 575 VLEFMPNGSLEKWL-YSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM-AAHVSDFGISKLL 652 (791)
Q Consensus 575 v~e~~~~g~L~~~l-~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~-~~kl~Dfgla~~~ 652 (791)
+.+|..+|++.+.+ .......+.........|+..++.|+|. ..++.|||+||+|.+++..+ ..+++|||+|..+
T Consensus 99 ~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~~ql~s~l~~~H~---~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~ 175 (601)
T KOG0590|consen 99 SLSYSDGGSLFSKISHPDSTGTSSSSASRYLPQLNSGLSYLHP---ENGVTHRDIKPSNSLLDESGSALKIADFGLATAY 175 (601)
T ss_pred ccCcccccccccccccCCccCCCCcchhhhhhhhccCccccCc---ccccccCCCCCccchhccCCCcccCCCchhhccc
Confidence 99999999999988 5443246666777889999999999994 45799999999999999999 9999999999988
Q ss_pred CC-CCCcceeecccc-cccccCCCccCC-CCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhh
Q 003855 653 GE-GEDSVTQTMTMA-TIGYMAPEYGSE-GIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEV 729 (791)
Q Consensus 653 ~~-~~~~~~~~~~~g-~~~y~aPE~~~~-~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 729 (791)
.. ..........+| ++.|+|||...+ ....+..|+||.|+++.-+++|..|++........+..|........
T Consensus 176 ~~~~g~~~~~~~~~g~s~~y~a~E~~~~~~~~~~~~d~~S~g~~l~~~~~g~~p~~~~~~~~~~~~~~~~~~~~~~---- 251 (601)
T KOG0590|consen 176 RNKNGAERSLKDRCGSSPPYGAPEHLSGKAYRGPSVDVWSLGIVLSAMLTGELPWDFPSRKDGRYSSWKSNKGRFT---- 251 (601)
T ss_pred cccCCcceeeecccCCCCCCCCcccccchhhcCCCcccccccccccccccCCCCccccccccccceeecccccccc----
Confidence 77 444455555678 999999998777 45667899999999999999999999876555555455544321100
Q ss_pred cchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHH
Q 003855 730 VDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAA 773 (791)
Q Consensus 730 ~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~ 773 (791)
...+........++..+++..+|+.|.+.+++.
T Consensus 252 -----------~~~~~~~~~~~~~~l~k~l~~~~~~r~s~~~~~ 284 (601)
T KOG0590|consen 252 -----------QLPWNSISDQAHDLLHKILKENPSNRLSIEELK 284 (601)
T ss_pred -----------cCccccCChhhhhcccccccCCchhcccccccc
Confidence 001112234456888899999999999988764
No 453
>cd05119 RIO RIO kinase family, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct
Probab=99.58 E-value=1.1e-14 Score=141.93 Aligned_cols=136 Identities=22% Similarity=0.255 Sum_probs=96.9
Q ss_pred ccccCCCcceEEEEEEecCCcEEEEEEeehhhhH--HHHH----------------------HHHHHHHHHhccCCc--c
Q 003855 506 CNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLER--AFRS----------------------FDSECEVLRNVRHRN--L 559 (791)
Q Consensus 506 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~--~~~~----------------------~~~e~~~l~~l~h~n--i 559 (791)
.+.||+|+||.||+|...+++.||||++...... .... ...|...+.++.+.. +
T Consensus 2 ~~~lg~G~~g~Vy~a~~~~~~~vavKv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~ 81 (187)
T cd05119 2 GGPIGTGKEADVYLALDGDGEPVAVKIYRTGRTSFKKRKRYRTGDYRFGRKKSNWRYLSRLWAEKEFRNLKRLYEAGVPV 81 (187)
T ss_pred CcccccccceeEEEEECCCCCEEEEEEEecCccchhhhhhhhHHHHHhccCCcchhhhhhHHHHHHHHHHHHHHHcCCCC
Confidence 4679999999999999888999999998653211 1111 134555555554432 3
Q ss_pred ceeeeeeccCCeeeEEEecCCCCCHHHH-HhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCC-CCeEecCCCCCCeEeCC
Q 003855 560 IKILSSCSNPDFKALVLEFMPNGSLEKW-LYSHNYFLDILERLNIMIDVGSALEYLHHGHSS-APIIHCDLKPTNILLDE 637 (791)
Q Consensus 560 v~l~~~~~~~~~~~lv~e~~~~g~L~~~-l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~-~~i~H~dlk~~Nill~~ 637 (791)
.+.+++ ...++||||++++++... +.... .. .+...++.+++.++.++| . .+|+||||||+||+++
T Consensus 82 ~~~~~~----~~~~lv~e~~~g~~~~~~~l~~~~--~~-~~~~~~~~~~~~~l~~lh----~~~~ivH~Dl~p~Nili~- 149 (187)
T cd05119 82 PKPIDL----NRHVLVMEFIGGDGIPAPRLKDVR--LL-EDPEELYDQILELMRKLY----REAGLVHGDLSEYNILVD- 149 (187)
T ss_pred CceEec----CCCEEEEEEeCCCCccChhhhhhh--hc-ccHHHHHHHHHHHHHHHh----hccCcCcCCCChhhEEEE-
Confidence 333433 235899999998543211 11111 11 567789999999999999 5 7899999999999999
Q ss_pred CCcEEEeeeccccccC
Q 003855 638 NMAAHVSDFGISKLLG 653 (791)
Q Consensus 638 ~~~~kl~Dfgla~~~~ 653 (791)
++.++++|||.|....
T Consensus 150 ~~~~~liDfg~a~~~~ 165 (187)
T cd05119 150 DGKVYIIDVPQAVEID 165 (187)
T ss_pred CCcEEEEECccccccc
Confidence 9999999999997543
No 454
>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family. The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves
Probab=99.56 E-value=2.4e-14 Score=134.29 Aligned_cols=135 Identities=23% Similarity=0.284 Sum_probs=113.5
Q ss_pred cccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccC--CccceeeeeeccCCeeeEEEecCCCC
Q 003855 505 ECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRH--RNLIKILSSCSNPDFKALVLEFMPNG 582 (791)
Q Consensus 505 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~~~~lv~e~~~~g 582 (791)
+.+.||+|.++.||++...+ ..+++|....... ...+..|+..++.++| +.+++++++...++..+++|||++++
T Consensus 2 ~~~~i~~g~~~~v~~~~~~~-~~~~iK~~~~~~~--~~~~~~e~~~~~~l~~~~~~~p~~~~~~~~~~~~~~v~e~~~g~ 78 (155)
T cd05120 2 SIKLLKGGLTNRVYLLGTKD-EDYVLKINPSREK--GADREREVAILQLLARKGLPVPKVLASGESDGWSYLLMEWIEGE 78 (155)
T ss_pred cceecccccccceEEEEecC-CeEEEEecCCCCc--hhHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCccEEEEEecCCe
Confidence 35689999999999999854 7899998865433 4578889999999976 58999999888888899999999988
Q ss_pred CHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 583 SLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 583 ~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
++..+ +......++.+++++++++|..+ ..+++|+|++|+||++++.+.+++.|||.++.
T Consensus 79 ~~~~~--------~~~~~~~~~~~~~~~l~~lh~~~-~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~~~ 138 (155)
T cd05120 79 TLDEV--------SEEEKEDIAEQLAELLAKLHQLP-LLVLCHGDLHPGNILVDDGKILGIIDWEYAGY 138 (155)
T ss_pred ecccC--------CHHHHHHHHHHHHHHHHHHhCCC-ceEEEecCCCcceEEEECCcEEEEEecccccC
Confidence 77653 55677788999999999999432 24799999999999999999999999999864
No 455
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.56 E-value=2.5e-16 Score=164.23 Aligned_cols=178 Identities=30% Similarity=0.493 Sum_probs=138.6
Q ss_pred CCCCCCEEEcccccCcccCCccccccCCCceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeE
Q 003855 213 RLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDI 292 (791)
Q Consensus 213 ~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L 292 (791)
.+..-...||+.|++. .+|..++.+-.|+.+.|++|.|. .+|..++++..|+.|+|+.|++. ..|..++.++ |+.|
T Consensus 73 ~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvl 148 (722)
T KOG0532|consen 73 DLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVL 148 (722)
T ss_pred cccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeE
Confidence 3445566777777777 77777777777777888888877 67777888888888888888886 5666677665 7788
Q ss_pred EccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccccccccCCCCCCcccCCCCCCcEEEccCCccC
Q 003855 293 NLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLS 372 (791)
Q Consensus 293 ~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~ 372 (791)
-+++|+++ .+|..++....|..||.+.|.+. .+|..++++.+|+.|++..|++. .+|..++.| .|..||+|.|+++
T Consensus 149 i~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~L-pLi~lDfScNkis 224 (722)
T KOG0532|consen 149 IVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCSL-PLIRLDFSCNKIS 224 (722)
T ss_pred EEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhCC-ceeeeecccCcee
Confidence 88888886 67777887788888888888887 67777888888888888888887 566777754 6788888888888
Q ss_pred CCCchhhhhcccCceEEccCCCCcccC
Q 003855 373 GKIPKSLETLSQLKQFNVSHNRLEGEI 399 (791)
Q Consensus 373 ~~~~~~~~~l~~L~~l~l~~N~l~~~~ 399 (791)
.+|-.|.+|+.|++|-|.+|+|...+
T Consensus 225 -~iPv~fr~m~~Lq~l~LenNPLqSPP 250 (722)
T KOG0532|consen 225 -YLPVDFRKMRHLQVLQLENNPLQSPP 250 (722)
T ss_pred -ecchhhhhhhhheeeeeccCCCCCCh
Confidence 78888888888888888888887644
No 456
>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed
Probab=99.53 E-value=8.9e-14 Score=139.59 Aligned_cols=135 Identities=18% Similarity=0.215 Sum_probs=104.0
Q ss_pred cccC-CCcceEEEEEEecCCcEEEEEEeehhh------h-------HHHHHHHHHHHHHHhccCCcc--ceeeeeeccC-
Q 003855 507 NLLG-TGSFGSVYKGTISDGTDVAIKIFNLQL------E-------RAFRSFDSECEVLRNVRHRNL--IKILSSCSNP- 569 (791)
Q Consensus 507 ~~ig-~G~~g~Vy~~~~~~~~~vavK~~~~~~------~-------~~~~~~~~e~~~l~~l~h~ni--v~l~~~~~~~- 569 (791)
..|| .|+.|+||.+... +..++||.+.... . .....+.+|++++.+++|+++ ++.+++....
T Consensus 37 ~~lg~~~g~gtv~~v~~~-~~~~vlk~~~r~~~i~kv~~~~~~~~~~~~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~~ 115 (239)
T PRK01723 37 RVVGSAKGRGTTWFVQTP-GVNWVLRHYRRGGLIGKLSKDRYLFTGLERTRAFAEFRLLAQLYEAGLPVPRPIAARVVRH 115 (239)
T ss_pred ceeecCCCCccEEEEEeC-CceEEEEEeeEcchHHhhhhhcccccchhhhHHHHHHHHHHHHHhCCCCCceeEeeeeeec
Confidence 4687 8899999998874 7789999875311 1 122457789999999998875 6667664332
Q ss_pred C---eeeEEEecCCC-CCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEee
Q 003855 570 D---FKALVLEFMPN-GSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSD 645 (791)
Q Consensus 570 ~---~~~lv~e~~~~-g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~D 645 (791)
. ..++||||+++ .+|.+++.... ++.. .+.+++.++.+|| ..+|+||||||.|||++.++.++|+|
T Consensus 116 ~~~~~~~lV~e~l~G~~~L~~~l~~~~--l~~~----~~~~i~~~l~~lH----~~GI~HrDlkp~NILv~~~~~v~LID 185 (239)
T PRK01723 116 GLFYRADILIERIEGARDLVALLQEAP--LSEE----QWQAIGQLIARFH----DAGVYHADLNAHNILLDPDGKFWLID 185 (239)
T ss_pred CcceeeeEEEEecCCCCCHHHHHhcCC--CCHH----HHHHHHHHHHHHH----HCCCCCCCCCchhEEEcCCCCEEEEE
Confidence 2 23599999997 69999886532 4433 3578999999999 78999999999999999999999999
Q ss_pred ecccccc
Q 003855 646 FGISKLL 652 (791)
Q Consensus 646 fgla~~~ 652 (791)
||.++..
T Consensus 186 fg~~~~~ 192 (239)
T PRK01723 186 FDRGELR 192 (239)
T ss_pred CCCcccC
Confidence 9988753
No 457
>PLN03150 hypothetical protein; Provisional
Probab=99.47 E-value=1e-13 Score=158.65 Aligned_cols=119 Identities=39% Similarity=0.671 Sum_probs=104.3
Q ss_pred CCCEEecCCcccCCCCCcchhccccccccccccccCCCCCCcccCCCCCCcEEEccCCccCCCCchhhhhcccCceEEcc
Q 003855 312 VLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQLKQFNVS 391 (791)
Q Consensus 312 ~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~ 391 (791)
.++.|+|++|.+.+.+|..++.+++|+.|+|++|.++|.+|..++.+++|+.|+|++|++++.+|..+.++++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcccCCCC--CCCcCCccccccCCccccCCCCCCCCCCCC
Q 003855 392 HNRLEGEIPVK--GSFKNFSVESFFGNYALCGPPKLRVPPCKP 432 (791)
Q Consensus 392 ~N~l~~~~~~~--~~~~~l~~~~~~~n~~~c~~~~~~~~~c~~ 432 (791)
+|+++|.+|.. ..+..+..+.+.+|+.+|+.+. .++|.+
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~--l~~C~~ 539 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG--LRACGP 539 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC--CCCCcc
Confidence 99999999864 1223455678899999999764 356753
No 458
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.45 E-value=2.9e-15 Score=156.46 Aligned_cols=197 Identities=27% Similarity=0.433 Sum_probs=165.3
Q ss_pred cCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecCCccCCCCCccccCCCCCcE
Q 003855 188 GNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLSGHIPPCLVSLTSLRE 267 (791)
Q Consensus 188 ~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 267 (791)
..+.--...||+.|++. .+|..+..+..|+.|.|.+|.|. .+|..++++..|+.|+|+.|+++ ..|..++.++ |+.
T Consensus 72 ~~ltdt~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkv 147 (722)
T KOG0532|consen 72 YDLTDTVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKV 147 (722)
T ss_pred ccccchhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-cee
Confidence 34555667899999998 77888888888999999999998 78889999999999999999998 7777788775 899
Q ss_pred EEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccccccccC
Q 003855 268 LHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQF 347 (791)
Q Consensus 268 L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l 347 (791)
|.+++|+++ .+|+.++.+..|..|+.+.|+|. .+|..++.+.+|+.|.+..|.+. .+|..++. -.|..||+|.|++
T Consensus 148 li~sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~~-LpLi~lDfScNki 223 (722)
T KOG0532|consen 148 LIVSNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELCS-LPLIRLDFSCNKI 223 (722)
T ss_pred EEEecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHhC-CceeeeecccCce
Confidence 999999998 67888888889999999999996 67888999999999999999998 67777774 4688999999999
Q ss_pred CCCCCcccCCCCCCcEEEccCCccCCCCchhhhhccc---CceEEccCCC
Q 003855 348 QGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQ---LKQFNVSHNR 394 (791)
Q Consensus 348 ~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~---L~~l~l~~N~ 394 (791)
. .+|-.|.+|..|++|-|.+|++. ..|..+...-. .++|+..-++
T Consensus 224 s-~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 224 S-YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred e-ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 9 89999999999999999999998 66766644332 3677777664
No 459
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.44 E-value=1.7e-13 Score=150.22 Aligned_cols=262 Identities=26% Similarity=0.336 Sum_probs=141.8
Q ss_pred EEeccCccccccccccccccccccccccccccccccCCCccccccccccCCC-CCCcEEEccCCCCcccCChhhhhhhhh
Q 003855 90 ALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNC-RNLTILSFGSNPLGGILPPVIGNFSAS 168 (791)
Q Consensus 90 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l-~~L~~L~L~~N~l~~~~~~~~~~~~~~ 168 (791)
.|+++.|.+.. .......+..++.|++.+|+++.++.. ...+ ++|+.|++++|++...
T Consensus 97 ~l~~~~~~~~~-~~~~~~~~~~l~~L~l~~n~i~~i~~~---------~~~~~~nL~~L~l~~N~i~~l----------- 155 (394)
T COG4886 97 SLDLNLNRLRS-NISELLELTNLTSLDLDNNNITDIPPL---------IGLLKSNLKELDLSDNKIESL----------- 155 (394)
T ss_pred eeecccccccc-CchhhhcccceeEEecCCcccccCccc---------cccchhhcccccccccchhhh-----------
Confidence 45555555531 222333445566666666666655431 2223 2666666666666521
Q ss_pred hhhhhcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecC
Q 003855 169 LQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTG 248 (791)
Q Consensus 169 L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~ 248 (791)
|..+..+++|+.|++++|+++ ..+.....+++|+.|++++|+++ .+|........|++|.+++
T Consensus 156 ---------------~~~~~~l~~L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~ 218 (394)
T COG4886 156 ---------------PSPLRNLPNLKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSN 218 (394)
T ss_pred ---------------hhhhhccccccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcC
Confidence 123445566666666666665 33333335566666666666666 4444444445566666666
Q ss_pred CccCCCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCC
Q 003855 249 NKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIP 328 (791)
Q Consensus 249 N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~ 328 (791)
|.+. ..+..+.++.++..|.+.+|++. ..+..+..+++++.|++++|.++...+ ++.+.+|+.|++++|.+....+
T Consensus 219 N~~~-~~~~~~~~~~~l~~l~l~~n~~~-~~~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~ 294 (394)
T COG4886 219 NSII-ELLSSLSNLKNLSGLELSNNKLE-DLPESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALP 294 (394)
T ss_pred Ccce-ecchhhhhcccccccccCCceee-eccchhccccccceecccccccccccc--ccccCccCEEeccCccccccch
Confidence 6433 34455666666666667777665 235566666677777777777764433 6677777777777777775555
Q ss_pred cchhccccccccccccccCCCCCCcccCCCCCCcEEEccCCccCCCCchhhhhcccCceEEccCCCCcc
Q 003855 329 STIGALKDLETLSLARNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQLKQFNVSHNRLEG 397 (791)
Q Consensus 329 ~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~ 397 (791)
........... ... +.+. ..+........+...++..+... ..+..+.....+..++...+....
T Consensus 295 ~~~~~~~~~~~-~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 359 (394)
T COG4886 295 LIALLLLLLEL-LLN-LLLT-LKALELKLNSILLNNNILSNGET-SSPEALSILESLNNLWTLDNALDE 359 (394)
T ss_pred hhhccchhHHh-hhh-hhhh-ccccccccccccccccccccccc-ccchhhcccccccCceeccccccc
Confidence 43333222222 111 3333 22223333334444455555555 555566666666666666655543
No 460
>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase. This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.
Probab=99.44 E-value=5e-13 Score=146.03 Aligned_cols=141 Identities=20% Similarity=0.268 Sum_probs=99.7
Q ss_pred cccCCCcceEEEEEEecCCcEEEEEEeehhhhHHH----------------------------------------HHHHH
Q 003855 507 NLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAF----------------------------------------RSFDS 546 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~----------------------------------------~~~~~ 546 (791)
+.||.|++|.||+|++++|+.||||+......+.. -+|..
T Consensus 123 ~plasaSigQVh~A~l~~G~~VaVKv~rp~i~~~i~~Dl~~l~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~Eldf~~ 202 (437)
T TIGR01982 123 KPLAAASIAQVHRARLVDGKEVAVKVLRPGIEKTIAADIALLYRLARIVERLSPDSRRLRPTEVVKEFEKTLRRELDLRR 202 (437)
T ss_pred cceeeeehhheEEEEecCCCEEEEEeeCCCcHHHHHHHHHHHHHHHHHHHHhCccccccCHHHHHHHHHHHHHHHHCHHH
Confidence 67999999999999999999999999864321110 02444
Q ss_pred HHHHHHhcc-----CCccceeeeeeccCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHH-HHHHHHccCCC
Q 003855 547 ECEVLRNVR-----HRNLIKILSSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS-ALEYLHHGHSS 620 (791)
Q Consensus 547 e~~~l~~l~-----h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~-~l~~LH~~~~~ 620 (791)
|+..+.+++ ++++.-..-+.......++||||++|+++.++........ .+.+++..++. .+..+| .
T Consensus 203 Ea~n~~~~~~~~~~~~~v~vP~v~~~~~~~~vLvmE~i~G~~L~~~~~~~~~~~---~~~~ia~~~~~~~l~ql~----~ 275 (437)
T TIGR01982 203 EAANASELGENFKNDPGVYVPEVYWDRTSERVLTMEWIDGIPLSDIAALDEAGL---DRKALAENLARSFLNQVL----R 275 (437)
T ss_pred HHHHHHHHHHhcCCCCCEEeCCEehhhcCCceEEEEeECCcccccHHHHHhcCC---CHHHHHHHHHHHHHHHHH----h
Confidence 555555552 3333222222222345689999999999998876432222 23456666666 467788 6
Q ss_pred CCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 621 APIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 621 ~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
.+++|+|++|.||++++++.++++|||++..+.+
T Consensus 276 ~g~~H~D~hPgNilv~~~g~i~liDfG~~~~l~~ 309 (437)
T TIGR01982 276 DGFFHADLHPGNIFVLKDGKIIALDFGIVGRLSE 309 (437)
T ss_pred CCceeCCCCcccEEECCCCcEEEEeCCCeeECCH
Confidence 7899999999999999999999999999987643
No 461
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.43 E-value=2e-13 Score=149.68 Aligned_cols=187 Identities=36% Similarity=0.544 Sum_probs=152.2
Q ss_pred cCCCCCCcEEEccCCCCcccCChhhhhhhhhhhhhhcccccccccCCccccCC-CCCCEEEccCCccccccCccccCCCC
Q 003855 138 LTNCRNLTILSFGSNPLGGILPPVIGNFSASLQKFYAYECKLKGNIPQEIGNL-SGLTLLSLHSNDLNGTISPTMGRLKR 216 (791)
Q Consensus 138 l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l-~~L~~L~L~~N~l~~~~~~~~~~l~~ 216 (791)
+..++.++.|++.+|.++. ++.....+ .+|+.|++++|.+. .+|..+..+++
T Consensus 112 ~~~~~~l~~L~l~~n~i~~--------------------------i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~ 164 (394)
T COG4886 112 LLELTNLTSLDLDNNNITD--------------------------IPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPN 164 (394)
T ss_pred hhcccceeEEecCCccccc--------------------------Cccccccchhhcccccccccchh-hhhhhhhcccc
Confidence 3444566666666666663 33444445 38999999999999 55577899999
Q ss_pred CCEEEcccccCcccCCccccccCCCceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccC
Q 003855 217 LQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSS 296 (791)
Q Consensus 217 L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~ 296 (791)
|+.|++++|+++ .+|...+.+++|+.|++++|+++ .+|.....+..|++|.+++|++. ..+..+..+.++..+.+.+
T Consensus 165 L~~L~l~~N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~ 241 (394)
T COG4886 165 LKNLDLSFNDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSNLKNLSGLELSN 241 (394)
T ss_pred ccccccCCchhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhhcccccccccCC
Confidence 999999999999 67766768999999999999999 67766667777999999999654 4667788999999999999
Q ss_pred CcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccccccccCCCCCCcccCC
Q 003855 297 NSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQGPIPESVGS 357 (791)
Q Consensus 297 N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~ 357 (791)
|++.. .+..++.+++|+.|++++|.++. ++. ++.+.+|+.|++++|.+...+|.....
T Consensus 242 n~~~~-~~~~~~~l~~l~~L~~s~n~i~~-i~~-~~~~~~l~~L~~s~n~~~~~~~~~~~~ 299 (394)
T COG4886 242 NKLED-LPESIGNLSNLETLDLSNNQISS-ISS-LGSLTNLRELDLSGNSLSNALPLIALL 299 (394)
T ss_pred ceeee-ccchhccccccceeccccccccc-ccc-ccccCccCEEeccCccccccchhhhcc
Confidence 99974 46788999999999999999994 444 899999999999999999666654443
No 462
>KOG1266 consensus Protein kinase [Signal transduction mechanisms]
Probab=99.35 E-value=1.6e-12 Score=127.51 Aligned_cols=197 Identities=21% Similarity=0.260 Sum_probs=136.8
Q ss_pred HHHhccCCccceeeeeeccC-----CeeeEEEecCCCCCHHHHHhhC---CCCCCHHHHHHHHHHHHHHHHHHHccCCCC
Q 003855 550 VLRNVRHRNLIKILSSCSNP-----DFKALVLEFMPNGSLEKWLYSH---NYFLDILERLNIMIDVGSALEYLHHGHSSA 621 (791)
Q Consensus 550 ~l~~l~h~niv~l~~~~~~~-----~~~~lv~e~~~~g~L~~~l~~~---~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~ 621 (791)
-+-++.|.|||+++.|+.+. ....++.|||+.|++.++|++. ...+......+++.||..||.|||.. .+
T Consensus 120 nllqlvHsnlvkfH~yw~d~K~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~tqIlsal~yLhs~--~P 197 (458)
T KOG1266|consen 120 NLLQLVHSNLVKFHKYWTDKKYEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWCTQILSALSYLHSC--DP 197 (458)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHHHHHHhhhhhhhcc--CC
Confidence 34456799999999998543 4567899999999999999843 33467777788999999999999963 56
Q ss_pred CeEecCCCCCCeEeCCCCcEEEeeeccccccCCCC---CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHH
Q 003855 622 PIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGE---DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETF 698 (791)
Q Consensus 622 ~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~---~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~ell 698 (791)
+|+|+++.-+-|++..+|-+|++----.. ..... .........+-++|.|||+-.....+..+|||+||....||.
T Consensus 198 piihgnlTc~tifiq~ngLIkig~~ap~s-~h~s~~~~~~~Ek~~~~~~~g~~a~~sg~~tn~~~a~dIy~fgmcAlema 276 (458)
T KOG1266|consen 198 PIIHGNLTCDTIFIQHNGLIKIGSVAPDS-THPSVNSTREAEKSVNTSLPGFSAPESGTTTNTTGASDIYKFGMCALEMA 276 (458)
T ss_pred ccccCCcchhheeecCCceEEecccCccc-cchhhhhhhHhhhhccccCCccccCCcCcccccccchhhhhhhHHHHHHH
Confidence 89999999999999999988874211111 10000 011112234678999999988888888999999999999999
Q ss_pred hCCCC-CCcccc--CcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 699 TRKRP-TDEMFT--GEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 699 tg~~p-~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
.+..- ...... .+...... .....+-+ -.+++..|++..|..||+|.+.+.
T Consensus 277 ilEiq~tnseS~~~~ee~ia~~-----i~~len~l--------------------qr~~i~kcl~~eP~~rp~ar~llf 330 (458)
T KOG1266|consen 277 ILEIQSTNSESKVEVEENIANV-----IIGLENGL--------------------QRGSITKCLEGEPNGRPDARLLLF 330 (458)
T ss_pred HheeccCCCcceeehhhhhhhh-----eeeccCcc--------------------ccCcCcccccCCCCCCcchhhhhc
Confidence 88753 221100 01110000 00000000 125788999999999999998764
No 463
>KOG1243 consensus Protein kinase [General function prediction only]
Probab=99.33 E-value=1.6e-11 Score=132.56 Aligned_cols=167 Identities=16% Similarity=0.194 Sum_probs=129.8
Q ss_pred ecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHH
Q 003855 522 ISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERL 601 (791)
Q Consensus 522 ~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~ 601 (791)
..++.+|.|...+...........+-++.++.++||+|+++++.+......|+|+|.+. .|..++.+.+ ...+.
T Consensus 34 k~~~~~vsVF~~~~~~~~~~~~~~~A~k~lKtlRHP~Il~yL~t~e~~~~~ylvTErV~--Pl~~~lk~l~----~~~v~ 107 (690)
T KOG1243|consen 34 KADGGPVSVFVYKRSNGEVTELAKRAVKRLKTLRHPNILSYLDTTEEEGTLYLVTERVR--PLETVLKELG----KEEVC 107 (690)
T ss_pred eccCCceEEEEEeCCCchhhHHHHHHHHHhhhccCchhhhhhhhhcccCceEEEeeccc--cHHHHHHHhH----HHHHH
Confidence 34788888888876655555667778899999999999999999999999999999984 6777777643 55667
Q ss_pred HHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcceeecccccccccCCCccCCCCC
Q 003855 602 NIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVTQTMTMATIGYMAPEYGSEGIV 681 (791)
Q Consensus 602 ~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~~~~~~g~~~y~aPE~~~~~~~ 681 (791)
..++||+.||.|||+ ...++|++|....|+|++.|+.||++|-++........ ......--..|..|+.+....
T Consensus 108 ~Gl~qIl~AL~FL~~---d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~--~~~~~~~~~s~~~P~~~~~s~- 181 (690)
T KOG1243|consen 108 LGLFQILAALSFLND---DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNA--PAKSLYLIESFDDPEEIDPSE- 181 (690)
T ss_pred HHHHHHHHHHHHHhc---cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCc--ccccchhhhcccChhhcCccc-
Confidence 789999999999996 45799999999999999999999999998865432221 001111223467777654433
Q ss_pred CccccHHhHHHHHHHHHhCC
Q 003855 682 SAKCDVYSYGVLLMETFTRK 701 (791)
Q Consensus 682 ~~~~Dv~s~G~vl~elltg~ 701 (791)
-..|.|-|||++||++.|.
T Consensus 182 -~s~D~~~Lg~li~el~ng~ 200 (690)
T KOG1243|consen 182 -WSIDSWGLGCLIEELFNGS 200 (690)
T ss_pred -cchhhhhHHHHHHHHhCcc
Confidence 3459999999999999993
No 464
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.32 E-value=5.8e-14 Score=138.97 Aligned_cols=211 Identities=21% Similarity=0.296 Sum_probs=96.9
Q ss_pred cccCCCCCCeeecCCCcccc----cCCccccCCCCCcEEeCCCC---cCcccCCchhhhcCCCccEEEccCCcceecCCc
Q 003855 8 EIGNLQNLQYLVFAENNLSG----LVPPTIFNISTMRILTLEGN---QLSGRLPSTVGHLLPNIESLLLAANNLTGIIPH 80 (791)
Q Consensus 8 ~~~~l~~L~~L~Ls~n~l~~----~~~~~~~~l~~L~~L~L~~n---~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~ 80 (791)
.+..+..+++|+||+|.+.. .+...+.+.++|+..++|+= ++..++|+.+-. ...
T Consensus 25 ~~~~~~s~~~l~lsgnt~G~EAa~~i~~~L~~~~~L~~v~~sd~ftGR~~~Ei~e~L~~------------------l~~ 86 (382)
T KOG1909|consen 25 ELEPMDSLTKLDLSGNTFGTEAARAIAKVLASKKELREVNLSDMFTGRLKDEIPEALKM------------------LSK 86 (382)
T ss_pred HhcccCceEEEeccCCchhHHHHHHHHHHHhhcccceeeehHhhhcCCcHHHHHHHHHH------------------HHH
Confidence 34456667777777776632 23344555666666666652 222234443221 113
Q ss_pred cCcCCCCCCEEeccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCCh
Q 003855 81 SITNATKLVALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPP 160 (791)
Q Consensus 81 ~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~ 160 (791)
++...++|++||||.|-+....+..|..+ +.++..|++|.|.+|.+. |.
T Consensus 87 aL~~~~~L~~ldLSDNA~G~~g~~~l~~l----------------------------l~s~~~L~eL~L~N~Glg---~~ 135 (382)
T KOG1909|consen 87 ALLGCPKLQKLDLSDNAFGPKGIRGLEEL----------------------------LSSCTDLEELYLNNCGLG---PE 135 (382)
T ss_pred HHhcCCceeEeeccccccCccchHHHHHH----------------------------HHhccCHHHHhhhcCCCC---hh
Confidence 34445566666666666553333333221 334555666666666554 22
Q ss_pred hhhhhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCcccccc----CccccCCCCCCEEEcccccCcccC----C
Q 003855 161 VIGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTI----SPTMGRLKRLQGLSLRNNNLEGSI----P 232 (791)
Q Consensus 161 ~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~----~~~~~~l~~L~~L~L~~N~l~~~~----~ 232 (791)
.=..+...|..|. .++. ...-+.|+++...+|++.... ...|...+.|+.+.++.|.|.... .
T Consensus 136 ag~~l~~al~~l~--~~kk-------~~~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~ 206 (382)
T KOG1909|consen 136 AGGRLGRALFELA--VNKK-------AASKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALA 206 (382)
T ss_pred HHHHHHHHHHHHH--HHhc-------cCCCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHH
Confidence 2222223344443 1111 113345666666666664222 123444455666666666554211 1
Q ss_pred ccccccCCCceEEecCCccCCC----CCccccCCCCCcEEEcCCCcCC
Q 003855 233 YDLCHLKLMFGIRLTGNKLSGH----IPPCLVSLTSLRELHLGSNKLT 276 (791)
Q Consensus 233 ~~~~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~ 276 (791)
..|..+++|+.|||.+|-++.. +...+..+++|++|++++|.+.
T Consensus 207 eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El~l~dcll~ 254 (382)
T KOG1909|consen 207 EALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLRELNLGDCLLE 254 (382)
T ss_pred HHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheeecccccccc
Confidence 2234444444444444444321 1223333444444444444443
No 465
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.30 E-value=3.8e-13 Score=129.83 Aligned_cols=209 Identities=22% Similarity=0.271 Sum_probs=142.2
Q ss_pred CccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecC-CccCCCCCccccCC
Q 003855 184 PQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTG-NKLSGHIPPCLVSL 262 (791)
Q Consensus 184 ~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~-N~i~~~~~~~~~~l 262 (791)
|-.+.-+.+|..+.++.+.-..+ .+.-..-+.|+++.+.+..++. .| .+-..+.+..+.-+. .-.+|..-..+..-
T Consensus 207 ~f~l~~f~~l~~~~~s~~~~~~i-~~~~~~kptl~t~~v~~s~~~~-~~-~l~pe~~~~D~~~~E~~t~~G~~~~~~dTW 283 (490)
T KOG1259|consen 207 SFNLNAFRNLKTLKFSALSTENI-VDIELLKPTLQTICVHNTTIQD-VP-SLLPETILADPSGSEPSTSNGSALVSADTW 283 (490)
T ss_pred ccchHHhhhhheeeeeccchhhe-eceeecCchhheeeeecccccc-cc-cccchhhhcCccCCCCCccCCceEEecchH
Confidence 33344556677777777654422 2222334677888777766652 11 111111111111111 01112222222233
Q ss_pred CCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhcccccccccc
Q 003855 263 TSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSL 342 (791)
Q Consensus 263 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 342 (791)
..|++||||+|.|+ .+.++..-++.++.|++|+|.|..+ ..+..+++|+.||||+|.++ .+..+-..+.+.+.|.|
T Consensus 284 q~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~L 359 (490)
T KOG1259|consen 284 QELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKL 359 (490)
T ss_pred hhhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeeh
Confidence 56899999999998 5667788889999999999999744 34888999999999999998 56666677899999999
Q ss_pred ccccCCCCCCcccCCCCCCcEEEccCCccCCCC-chhhhhcccCceEEccCCCCcccCCC
Q 003855 343 ARNQFQGPIPESVGSLISLESLDLSGNNLSGKI-PKSLETLSQLKQFNVSHNRLEGEIPV 401 (791)
Q Consensus 343 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~~~~~~ 401 (791)
+.|.|.. + ..+..+-+|..||+++|+|.... ...++++|.|+.+.|.+|++.+.+..
T Consensus 360 a~N~iE~-L-SGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~vdY 417 (490)
T KOG1259|consen 360 AQNKIET-L-SGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGSVDY 417 (490)
T ss_pred hhhhHhh-h-hhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCccccchH
Confidence 9999973 2 45777889999999999997433 35788999999999999999987654
No 466
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.30 E-value=2.1e-12 Score=138.26 Aligned_cols=247 Identities=22% Similarity=0.251 Sum_probs=180.8
Q ss_pred ccccccccCC--CcceEEEEEEe---cCCcEEEEEEeehhhh--HHHHHHHHHHHHHHhc-cCCccceeeeeeccCCeee
Q 003855 502 EFNECNLLGT--GSFGSVYKGTI---SDGTDVAIKIFNLQLE--RAFRSFDSECEVLRNV-RHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 502 ~~~~~~~ig~--G~~g~Vy~~~~---~~~~~vavK~~~~~~~--~~~~~~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 573 (791)
.|.....+|. |.+|.||.+.. .++..+|+|.-+.... .....-.+|+.....+ .|++.++....+...+..+
T Consensus 115 ~~~~~~~~g~~~g~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~e~~~~lf 194 (524)
T KOG0601|consen 115 RFPISSRTGSLPGSKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAWEGSGILF 194 (524)
T ss_pred hcccccccccCCCCCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCcccccCCcce
Confidence 4566778999 99999999986 3688899997443322 2222223455555555 4999999999999999999
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHH----HHHHHHccCCCCCeEecCCCCCCeEeCCC-CcEEEeeecc
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGS----ALEYLHHGHSSAPIIHCDLKPTNILLDEN-MAAHVSDFGI 648 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~----~l~~LH~~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfgl 648 (791)
+-.|++ +.++.++.+.....++....+....+..+ |+.++| +..++|-|+||.||+...+ ..++++|||+
T Consensus 195 iqtE~~-~~sl~~~~~~~~~~~p~~~l~~~~~~~~~~~~~al~~~h----s~~~~~~~~kp~~i~~~~~~~s~~~~df~~ 269 (524)
T KOG0601|consen 195 IQTELC-GESLQSYCHTPCNFLPDNLLWNSLRDWLSRDVTALSHLH----SNNIVHDDLKPANIFTTSDWTSCKLTDFGL 269 (524)
T ss_pred eeeccc-cchhHHhhhcccccCCchhhhhHHhhhhhcccccccccC----CCcccccccchhheecccccceeecCCcce
Confidence 999988 57999999887777888888889999988 999999 7789999999999999999 8899999999
Q ss_pred ccccCCCCCcce---eecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCc-cccCcchHHHHHHHhcCC
Q 003855 649 SKLLGEGEDSVT---QTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDE-MFTGEMSLRRWVKESLPH 724 (791)
Q Consensus 649 a~~~~~~~~~~~---~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~-~~~~~~~~~~~~~~~~~~ 724 (791)
...+.+...... .....|...|++||... +.++.+.|+|++|.++.|..++..+... ....-..+++++
T Consensus 270 v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~-~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~------ 342 (524)
T KOG0601|consen 270 VSKISDGNFSSVFKVSKRPEGDCIYAAKELLN-GLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY------ 342 (524)
T ss_pred eEEccCCccccceeeeecCCCCceEeChhhhc-cccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc------
Confidence 998877653221 11225778899999764 5678899999999999999998765322 111111111110
Q ss_pred ChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHH
Q 003855 725 GLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAA 774 (791)
Q Consensus 725 ~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~ 774 (791)
-..+.++ .-..++...+..+++.+|-.|++++.+..
T Consensus 343 ip~e~~~--------------~~s~~l~~~~~~~~d~~~~~~~~~q~~~~ 378 (524)
T KOG0601|consen 343 IPLEFCE--------------GGSSSLRSVTSQMLDEDPRLRLTAQILTA 378 (524)
T ss_pred Cchhhhc--------------CcchhhhhHHHHhcCcchhhhhHHHHHhc
Confidence 0011111 11233445888999999999999887654
No 467
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.29 E-value=1.7e-12 Score=121.34 Aligned_cols=114 Identities=28% Similarity=0.355 Sum_probs=40.9
Q ss_pred ccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCCEEeccCccccccccccccccccc
Q 003855 33 IFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLVALDLGFNSFAGHILNTFGNLRHL 112 (791)
Q Consensus 33 ~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L 112 (791)
+.+..++++|+|++|+|+ .+. .+...+.+|++|+|++|.|+.+ ..+..+++|+.|++++|+|+.+.......+++|
T Consensus 15 ~~n~~~~~~L~L~~n~I~-~Ie-~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~i~~~l~~~lp~L 90 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQIS-TIE-NLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISSISEGLDKNLPNL 90 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S-CHHHHHH-TT-
T ss_pred cccccccccccccccccc-ccc-chhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCccccchHHhCCcC
Confidence 445556777888888876 553 3443366778888888888754 357777888888888888876544333467888
Q ss_pred cccccccccccccCCCccccccccccCCCCCCcEEEccCCCCccc
Q 003855 113 SLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGI 157 (791)
Q Consensus 113 ~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~ 157 (791)
+.|++++|+|..+.. +..+..+++|+.|+|.+|+++..
T Consensus 91 ~~L~L~~N~I~~l~~-------l~~L~~l~~L~~L~L~~NPv~~~ 128 (175)
T PF14580_consen 91 QELYLSNNKISDLNE-------LEPLSSLPKLRVLSLEGNPVCEK 128 (175)
T ss_dssp -EEE-TTS---SCCC-------CGGGGG-TT--EEE-TT-GGGGS
T ss_pred CEEECcCCcCCChHH-------hHHHHcCCCcceeeccCCcccch
Confidence 888888888876543 34577889999999999998743
No 468
>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed
Probab=99.29 E-value=1.6e-11 Score=135.51 Aligned_cols=145 Identities=17% Similarity=0.227 Sum_probs=90.6
Q ss_pred hhccccccccCCCcceEEEEEEecC-CcEEEEEEeehhhhH----------------------------------HHHHH
Q 003855 500 TDEFNECNLLGTGSFGSVYKGTISD-GTDVAIKIFNLQLER----------------------------------AFRSF 544 (791)
Q Consensus 500 ~~~~~~~~~ig~G~~g~Vy~~~~~~-~~~vavK~~~~~~~~----------------------------------~~~~~ 544 (791)
-..|+. +.||.|++|.||+|++++ |+.||||+......+ ..+.+
T Consensus 119 F~~fd~-~PlasaSiaQVh~A~l~~~G~~VAVKV~rP~i~~~I~~Dl~~l~~~a~~l~~~~~~~~~l~~~~~v~e~~~~l 197 (537)
T PRK04750 119 FDDFDI-KPLASASIAQVHFARLKDNGREVVVKVLRPDILPVIDADLALMYRLARWVERLLPDGRRLKPREVVAEFEKTL 197 (537)
T ss_pred HHhcCh-hhhcCCCccEEEEEEECCCCCEEEEEEeCcchHHHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHH
Confidence 355776 789999999999999987 999999998754211 11122
Q ss_pred ------HHHHHHHHhcc----CCccceeeeeecc-CCeeeEEEecCCCCCHHHHH--hhCCCCCCHHHHHHHHHHHHHH-
Q 003855 545 ------DSECEVLRNVR----HRNLIKILSSCSN-PDFKALVLEFMPNGSLEKWL--YSHNYFLDILERLNIMIDVGSA- 610 (791)
Q Consensus 545 ------~~e~~~l~~l~----h~niv~l~~~~~~-~~~~~lv~e~~~~g~L~~~l--~~~~~~~~~~~~~~i~~~i~~~- 610 (791)
..|+..+.+++ +...+.+=..+.+ ....++||||++|+++.++- ...+ .+... ++...++.
T Consensus 198 ~~ElD~~~Ea~N~~~~~~~f~~~~~v~VP~v~~d~st~~VLvmE~i~G~~l~d~~~l~~~g--~d~~~---la~~~v~~~ 272 (537)
T PRK04750 198 HDELDLMREAANASQLRRNFEDSDMLYVPEVYWDYCSETVMVMERMYGIPVSDVAALRAAG--TDMKL---LAERGVEVF 272 (537)
T ss_pred HHhhCHHHHHHHHHHHHHHccCCCCeecceeecccCCCceEEEeeecCccHHhHHHHHhcC--CCHHH---HHHHHHHHH
Confidence 23333333331 2222222111111 23457999999999998753 2222 22221 22222211
Q ss_pred HHHHHccCCCCCeEecCCCCCCeEeCCCC----cEEEeeeccccccCC
Q 003855 611 LEYLHHGHSSAPIIHCDLKPTNILLDENM----AAHVSDFGISKLLGE 654 (791)
Q Consensus 611 l~~LH~~~~~~~i~H~dlk~~Nill~~~~----~~kl~Dfgla~~~~~ 654 (791)
+..+. ..+++|+|++|.||+++.++ .+++.|||++..+.+
T Consensus 273 ~~Qif----~~GffHaDpHPGNIlv~~~g~~~~~i~llDFGivg~l~~ 316 (537)
T PRK04750 273 FTQVF----RDGFFHADMHPGNIFVSYDPPENPRYIALDFGIVGSLNK 316 (537)
T ss_pred HHHHH----hCCeeeCCCChHHeEEecCCCCCCeEEEEecceEEECCH
Confidence 22233 35899999999999999888 999999999987754
No 469
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.28 E-value=3.2e-13 Score=133.83 Aligned_cols=178 Identities=21% Similarity=0.276 Sum_probs=102.5
Q ss_pred cccCCCCCCcEEEccCCCCcccCChhhhhhhh---hhhhhhcccccccccCCccccCCCCCCEEEccCCccccccCcccc
Q 003855 136 SSLTNCRNLTILSFGSNPLGGILPPVIGNFSA---SLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMG 212 (791)
Q Consensus 136 ~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~---~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~ 212 (791)
+++-++++|++||||.|-+....+..+..+.. +|++|+|.+|.+...-...++. .|..|. .| ...+
T Consensus 86 ~aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~--al~~l~--~~-------kk~~ 154 (382)
T KOG1909|consen 86 KALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGR--ALFELA--VN-------KKAA 154 (382)
T ss_pred HHHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHH--HHHHHH--HH-------hccC
Confidence 45778889999999999998766666665532 3555555555554222222211 111111 11 1233
Q ss_pred CCCCCCEEEcccccCcccCC----ccccccCCCceEEecCCccCCC----CCccccCCCCCcEEEcCCCcCCCC----CC
Q 003855 213 RLKRLQGLSLRNNNLEGSIP----YDLCHLKLMFGIRLTGNKLSGH----IPPCLVSLTSLRELHLGSNKLTSS----IP 280 (791)
Q Consensus 213 ~l~~L~~L~L~~N~l~~~~~----~~~~~l~~L~~L~L~~N~i~~~----~~~~~~~l~~L~~L~L~~N~l~~~----~~ 280 (791)
.-++|+++....|++..... ..|...+.|+.+.++.|.|... ....|..+++|+.|||..|-++.. +.
T Consensus 155 ~~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~La 234 (382)
T KOG1909|consen 155 SKPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALA 234 (382)
T ss_pred CCcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHH
Confidence 45788999999998874332 3456667888888888887522 234566777777777777777632 22
Q ss_pred ccccCCCCCCeEEccCCcCcccCCccc-----ccCCCCCEEecCCcccC
Q 003855 281 SSLWSLEYILDINLSSNSLNDSLPSNV-----QKLKVLTVLDLSRNQLS 324 (791)
Q Consensus 281 ~~~~~l~~L~~L~l~~N~i~~~~~~~~-----~~l~~L~~L~l~~N~l~ 324 (791)
..++.+++|+.|++++|.+......+| ...++|+.|.|.+|.|+
T Consensus 235 kaL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt 283 (382)
T KOG1909|consen 235 KALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEIT 283 (382)
T ss_pred HHhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhH
Confidence 344445555555555555543322222 12344444444444444
No 470
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.24 E-value=6.1e-12 Score=117.67 Aligned_cols=128 Identities=29% Similarity=0.377 Sum_probs=45.0
Q ss_pred ccCCCCCcEEEcCCCcCCCCCCcccc-CCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcch-hcccc
Q 003855 259 LVSLTSLRELHLGSNKLTSSIPSSLW-SLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTI-GALKD 336 (791)
Q Consensus 259 ~~~l~~L~~L~L~~N~l~~~~~~~~~-~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~-~~l~~ 336 (791)
+.+..++++|+|++|+|+.+ +.+. .+.+|+.|+|++|.|+.. +.+..++.|+.|++++|+|+. ++..+ ..+++
T Consensus 15 ~~n~~~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~ 89 (175)
T PF14580_consen 15 YNNPVKLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPN 89 (175)
T ss_dssp -----------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT
T ss_pred cccccccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCc
Confidence 33444567777777777632 2344 456777777777777643 246667778888888888873 44334 35778
Q ss_pred ccccccccccCCCCC-CcccCCCCCCcEEEccCCccCCCCc---hhhhhcccCceEEcc
Q 003855 337 LETLSLARNQFQGPI-PESVGSLISLESLDLSGNNLSGKIP---KSLETLSQLKQFNVS 391 (791)
Q Consensus 337 L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~~~---~~~~~l~~L~~l~l~ 391 (791)
|++|+|++|+|...- -..++.+++|+.|+|.+|+++...- ..+..+|+|+.||-.
T Consensus 90 L~~L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~~~YR~~vi~~lP~Lk~LD~~ 148 (175)
T PF14580_consen 90 LQELYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEKKNYRLFVIYKLPSLKVLDGQ 148 (175)
T ss_dssp --EEE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGSTTHHHHHHHH-TT-SEETTE
T ss_pred CCEEECcCCcCCChHHhHHHHcCCCcceeeccCCcccchhhHHHHHHHHcChhheeCCE
Confidence 888888888876421 2456678888888888888874321 246677888877643
No 471
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.24 E-value=7.7e-13 Score=145.04 Aligned_cols=88 Identities=28% Similarity=0.323 Sum_probs=53.7
Q ss_pred CCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccccccccCCC---CCCcc-cCCCCCCcEE
Q 003855 289 ILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQG---PIPES-VGSLISLESL 364 (791)
Q Consensus 289 L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~---~~~~~-~~~l~~L~~L 364 (791)
|+.+++++|.+.. .+..+..+..+..|++++|++... ..+.....+..+.+..|.+.. ..... .+..+.++.+
T Consensus 234 L~~l~l~~n~i~~-~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 310 (414)
T KOG0531|consen 234 LRELYLSGNRISR-SPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTL 310 (414)
T ss_pred HHHHhcccCcccc-ccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhcccccccccccccc
Confidence 5555666665542 224455666777777777777632 234556667777777777652 11122 4566788888
Q ss_pred EccCCccCCCCchhh
Q 003855 365 DLSGNNLSGKIPKSL 379 (791)
Q Consensus 365 ~l~~N~l~~~~~~~~ 379 (791)
.+..|.+....+...
T Consensus 311 ~~~~~~~~~~~~~~~ 325 (414)
T KOG0531|consen 311 TLELNPIRKISSLDL 325 (414)
T ss_pred ccccCcccccccccH
Confidence 888888876655443
No 472
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.24 E-value=1.1e-12 Score=126.68 Aligned_cols=129 Identities=29% Similarity=0.374 Sum_probs=73.5
Q ss_pred CCceEEecCCccCCCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecC
Q 003855 240 LMFGIRLTGNKLSGHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLS 319 (791)
Q Consensus 240 ~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~ 319 (791)
.|+++|||+|.|+ .+.....=+|.++.|++|+|.|..+ +.+..+++|+.||||+|.++ .+..+-.++.+++.|.|+
T Consensus 285 ~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~v--~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL~La 360 (490)
T KOG1259|consen 285 ELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRTV--QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTLKLA 360 (490)
T ss_pred hhhhccccccchh-hhhhhhhhccceeEEeccccceeee--hhhhhcccceEeecccchhH-hhhhhHhhhcCEeeeehh
Confidence 3444444444444 2333333344444444444444421 12444455555555555544 222333455666777777
Q ss_pred CcccCCCCCcchhccccccccccccccCCCCC-CcccCCCCCCcEEEccCCccCCC
Q 003855 320 RNQLSGDIPSTIGALKDLETLSLARNQFQGPI-PESVGSLISLESLDLSGNNLSGK 374 (791)
Q Consensus 320 ~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~l~~N~l~~~ 374 (791)
.|.|.+ -+.++.+-+|..||+++|+|.... -..++++|.|+.|.|.+|++.+.
T Consensus 361 ~N~iE~--LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl~~~ 414 (490)
T KOG1259|consen 361 QNKIET--LSGLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPLAGS 414 (490)
T ss_pred hhhHhh--hhhhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCcccc
Confidence 777652 234666777777888888776321 35688999999999999999844
No 473
>PLN03150 hypothetical protein; Provisional
Probab=99.24 E-value=1.8e-11 Score=140.25 Aligned_cols=114 Identities=38% Similarity=0.660 Sum_probs=105.6
Q ss_pred CCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccccccccCCCCCCcccCCCCCCcEEEcc
Q 003855 288 YILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQGPIPESVGSLISLESLDLS 367 (791)
Q Consensus 288 ~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~ 367 (791)
.++.|+|++|.+++.+|..++.+++|+.|+|++|.+.+.+|..++.+++|+.|+|++|++++.+|..++.+++|+.|+|+
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCccCCCCchhhhhc-ccCceEEccCCCCcccCCC
Q 003855 368 GNNLSGKIPKSLETL-SQLKQFNVSHNRLEGEIPV 401 (791)
Q Consensus 368 ~N~l~~~~~~~~~~l-~~L~~l~l~~N~l~~~~~~ 401 (791)
+|+++|.+|..+..+ .++..+++.+|+..|..|.
T Consensus 499 ~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~p~ 533 (623)
T PLN03150 499 GNSLSGRVPAALGGRLLHRASFNFTDNAGLCGIPG 533 (623)
T ss_pred CCcccccCChHHhhccccCceEEecCCccccCCCC
Confidence 999999999998764 5778999999987665553
No 474
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=99.24 E-value=1.3e-12 Score=143.32 Aligned_cols=268 Identities=22% Similarity=0.251 Sum_probs=147.9
Q ss_pred CCCeeecCCCcccccCCccc-cCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCCEEe
Q 003855 14 NLQYLVFAENNLSGLVPPTI-FNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLVALD 92 (791)
Q Consensus 14 ~L~~L~Ls~n~l~~~~~~~~-~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~ 92 (791)
.++.++..++.+... ..+ ..+..++.++++.|.|. .+-..+.. +++|+.|++.+|+|..+ ...+..+++|++|+
T Consensus 50 ~~~~~~~~~~~~~~~--~~~~~~l~~l~~l~l~~n~i~-~~~~~l~~-~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ 124 (414)
T KOG0531|consen 50 DLEEIDLIFNLDGSD--EDLVESLTSLKELNLRQNLIA-KILNHLSK-LKSLEALDLYDNKIEKI-ENLLSSLVNLQVLD 124 (414)
T ss_pred hhhhhcchhccccch--hhhHHHhHhHHhhccchhhhh-hhhccccc-ccceeeeeccccchhhc-ccchhhhhcchhee
Confidence 344445554443321 111 45667777778888886 42222322 67888888888888843 33367788888888
Q ss_pred ccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChhhhhhhhhhhhh
Q 003855 93 LGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPVIGNFSASLQKF 172 (791)
Q Consensus 93 L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L 172 (791)
|++|+|+.+. .+..++.|+.|++++|.|+.+. .+..+++|+.+++++|++...-+... .....++.+
T Consensus 125 ls~N~I~~i~--~l~~l~~L~~L~l~~N~i~~~~----------~~~~l~~L~~l~l~~n~i~~ie~~~~-~~~~~l~~l 191 (414)
T KOG0531|consen 125 LSFNKITKLE--GLSTLTLLKELNLSGNLISDIS----------GLESLKSLKLLDLSYNRIVDIENDEL-SELISLEEL 191 (414)
T ss_pred cccccccccc--chhhccchhhheeccCcchhcc----------CCccchhhhcccCCcchhhhhhhhhh-hhccchHHH
Confidence 8888887543 4566666888888888887754 35667888888888888875433101 112334555
Q ss_pred hcccccccccCCccccCCCCCCEEEccCCccccccCccccCCCCCCEEEcccccCcccCCccccccCCCceEEecCCccC
Q 003855 173 YAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLS 252 (791)
Q Consensus 173 ~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~ 252 (791)
++.+|.+..+ ..+..+..+..+++..|.++.+.+ +..+.. ..|+.+++++|.+.
T Consensus 192 ~l~~n~i~~i--~~~~~~~~l~~~~l~~n~i~~~~~--l~~~~~----------------------~~L~~l~l~~n~i~ 245 (414)
T KOG0531|consen 192 DLGGNSIREI--EGLDLLKKLVLLSLLDNKISKLEG--LNELVM----------------------LHLRELYLSGNRIS 245 (414)
T ss_pred hccCCchhcc--cchHHHHHHHHhhcccccceeccC--cccchh----------------------HHHHHHhcccCccc
Confidence 5555555421 222333333444555555542211 111111 02444555555544
Q ss_pred CCCCccccCCCCCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCccc---CCc-ccccCCCCCEEecCCcccCCCCC
Q 003855 253 GHIPPCLVSLTSLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDS---LPS-NVQKLKVLTVLDLSRNQLSGDIP 328 (791)
Q Consensus 253 ~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~---~~~-~~~~l~~L~~L~l~~N~l~~~~~ 328 (791)
..+..+..++++..|++.+|++... ..+.....+..+.+..|.+... ... .....+.++.+.+..|.+....+
T Consensus 246 -~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (414)
T KOG0531|consen 246 -RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKLALSEAISQEYITSAAPTLVTLTLELNPIRKISS 322 (414)
T ss_pred -cccccccccccccccchhhcccccc--ccccccchHHHhccCcchhcchhhhhccccccccccccccccccCccccccc
Confidence 2223445555566666666666422 2234444555555555555421 111 14556778888888888875444
No 475
>cd05151 ChoK Choline Kinase (ChoK). The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph
Probab=99.23 E-value=3.3e-11 Score=115.30 Aligned_cols=131 Identities=18% Similarity=0.196 Sum_probs=95.4
Q ss_pred ccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccc-eeeeeeccCCeeeEEEecCCCCCH
Q 003855 506 CNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLI-KILSSCSNPDFKALVLEFMPNGSL 584 (791)
Q Consensus 506 ~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv-~l~~~~~~~~~~~lv~e~~~~g~L 584 (791)
++.++.|.++.||+++.. +..|++|+...... ....+..|+.+++.+.+.+++ +++++.. ...++||||++|.++
T Consensus 3 ~~~l~~G~~~~vy~~~~~-~~~~~lK~~~~~~~-~~~~~~~E~~~l~~l~~~~~~P~~~~~~~--~~~~lv~e~i~G~~l 78 (170)
T cd05151 3 ISPLKGGMTNKNYRVEVA-NKKYVVRIPGNGTE-LLINRENEAENSKLAAEAGIGPKLYYFDP--ETGVLITEFIEGSEL 78 (170)
T ss_pred eeecCCcccCceEEEEEC-CeEEEEEeCCCCcc-cccCHHHHHHHHHHHHHhCCCCceEEEeC--CCCeEEEEecCCCcc
Confidence 357899999999999874 77899998754432 123467899999988655544 4444432 345799999999887
Q ss_pred HHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCC-CCCeEecCCCCCCeEeCCCCcEEEeeecccc
Q 003855 585 EKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHS-SAPIIHCDLKPTNILLDENMAAHVSDFGISK 650 (791)
Q Consensus 585 ~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~-~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 650 (791)
.+. . .....++.+++++++.||.... ...++|+|++|.||+++ ++.++++|||.+.
T Consensus 79 ~~~----~-----~~~~~~~~~l~~~l~~LH~~~~~~~~~~HgD~~~~Nil~~-~~~~~liDf~~a~ 135 (170)
T cd05151 79 LTE----D-----FSDPENLEKIAKLLKKLHSSPLPDLVPCHNDLLPGNFLLD-DGRLWLIDWEYAG 135 (170)
T ss_pred ccc----c-----ccCHHHHHHHHHHHHHHhCCCCCCceeecCCCCcCcEEEE-CCeEEEEeccccc
Confidence 643 0 1123456789999999994221 22369999999999999 6789999999875
No 476
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.21 E-value=4.6e-12 Score=129.03 Aligned_cols=210 Identities=20% Similarity=0.142 Sum_probs=98.0
Q ss_pred CCccEEEccCCcceecCC-ccCcCCCCCCEEeccCccccccc--cccccccccccccccccccccccCCCcccccccccc
Q 003855 62 PNIESLLLAANNLTGIIP-HSITNATKLVALDLGFNSFAGHI--LNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSL 138 (791)
Q Consensus 62 ~~L~~L~L~~N~l~~~~~-~~~~~l~~L~~L~L~~N~i~~~~--~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l 138 (791)
.+|+...|.+..+..... .....+++++.||||.|-+.... ......|++|+.|+++.|++.....+.. -
T Consensus 121 kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~-------~ 193 (505)
T KOG3207|consen 121 KKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNT-------T 193 (505)
T ss_pred HhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccc-------h
Confidence 344444444444441111 23444555555555555544321 2234455666666666666554332221 1
Q ss_pred CCCCCCcEEEccCCCCcccCChhhhhhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCcccccc-CccccCCCCC
Q 003855 139 TNCRNLTILSFGSNPLGGILPPVIGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTI-SPTMGRLKRL 217 (791)
Q Consensus 139 ~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L 217 (791)
..+++|+.|.|+.|.++-.--..+....++|+.|+|..|...........-++.|+.|||++|++.... ....+.++.|
T Consensus 194 ~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L 273 (505)
T KOG3207|consen 194 LLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGL 273 (505)
T ss_pred hhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccch
Confidence 245778888888888773211122222234455555544322222222333444555555555543211 1223444455
Q ss_pred CEEEcccccCcccCCccccccCCCceEEecCCccCCCCCcc-----ccCCCCCcEEEcCCCcCCCC-CCccccCCCCCCe
Q 003855 218 QGLSLRNNNLEGSIPYDLCHLKLMFGIRLTGNKLSGHIPPC-----LVSLTSLRELHLGSNKLTSS-IPSSLWSLEYILD 291 (791)
Q Consensus 218 ~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~-----~~~l~~L~~L~L~~N~l~~~-~~~~~~~l~~L~~ 291 (791)
..|+++.|.|..+- .|+. ...+++|+.|+++.|+|... .-..+..+++|+.
T Consensus 274 ~~Lnls~tgi~si~-----------------------~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~ 330 (505)
T KOG3207|consen 274 NQLNLSSTGIASIA-----------------------EPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKH 330 (505)
T ss_pred hhhhccccCcchhc-----------------------CCCccchhhhcccccceeeecccCccccccccchhhccchhhh
Confidence 55555555444211 1222 23455666677776666422 1123444566666
Q ss_pred EEccCCcCcc
Q 003855 292 INLSSNSLND 301 (791)
Q Consensus 292 L~l~~N~i~~ 301 (791)
|.+..|.++.
T Consensus 331 l~~~~n~ln~ 340 (505)
T KOG3207|consen 331 LRITLNYLNK 340 (505)
T ss_pred hhcccccccc
Confidence 6666666653
No 477
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.17 E-value=2.2e-12 Score=131.30 Aligned_cols=214 Identities=21% Similarity=0.160 Sum_probs=141.0
Q ss_pred cCCCCCCEEeccCcccccccc-ccccccccccccccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChh
Q 003855 83 TNATKLVALDLGFNSFAGHIL-NTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPV 161 (791)
Q Consensus 83 ~~l~~L~~L~L~~N~i~~~~~-~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~ 161 (791)
.++.+|+...|.+..+..... .....+++++.|+|+.|-+..... ...-...+|+|+.|+|+.|++......
T Consensus 118 sn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~------v~~i~eqLp~Le~LNls~Nrl~~~~~s- 190 (505)
T KOG3207|consen 118 SNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFP------VLKIAEQLPSLENLNLSSNRLSNFISS- 190 (505)
T ss_pred hhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHH------HHHHHHhcccchhcccccccccCCccc-
Confidence 345566666666666653332 345556666666666665553221 112234556666666666665421110
Q ss_pred hhhhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCcccccc-CccccCCCCCCEEEcccccCcccCCccccccCC
Q 003855 162 IGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTI-SPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKL 240 (791)
Q Consensus 162 ~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~-~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~ 240 (791)
. .-..+++|+.|.|+.|.++... ......+|+|+.|+|..|...........-++.
T Consensus 191 --------------------~---~~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~ 247 (505)
T KOG3207|consen 191 --------------------N---TTLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQT 247 (505)
T ss_pred --------------------c---chhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhH
Confidence 0 0124678899999999997332 223457899999999999644355556667888
Q ss_pred CceEEecCCccCCCC-CccccCCCCCcEEEcCCCcCCCCC-Ccc-----ccCCCCCCeEEccCCcCccc-CCcccccCCC
Q 003855 241 MFGIRLTGNKLSGHI-PPCLVSLTSLRELHLGSNKLTSSI-PSS-----LWSLEYILDINLSSNSLNDS-LPSNVQKLKV 312 (791)
Q Consensus 241 L~~L~L~~N~i~~~~-~~~~~~l~~L~~L~L~~N~l~~~~-~~~-----~~~l~~L~~L~l~~N~i~~~-~~~~~~~l~~ 312 (791)
|+.|||++|.+.... -...+.++.|+.|+++.|.+.++. |+. ...+++|++|+++.|+|.+. .-..+..+++
T Consensus 248 L~~LdLs~N~li~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~n 327 (505)
T KOG3207|consen 248 LQELDLSNNNLIDFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLEN 327 (505)
T ss_pred HhhccccCCcccccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCccccccccchhhccch
Confidence 999999999887322 245788999999999999998653 322 34578999999999999632 1134566788
Q ss_pred CCEEecCCcccCCC
Q 003855 313 LTVLDLSRNQLSGD 326 (791)
Q Consensus 313 L~~L~l~~N~l~~~ 326 (791)
|+.|.+..|.+..+
T Consensus 328 lk~l~~~~n~ln~e 341 (505)
T KOG3207|consen 328 LKHLRITLNYLNKE 341 (505)
T ss_pred hhhhhccccccccc
Confidence 89999999999843
No 478
>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain. The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.
Probab=99.16 E-value=5.7e-10 Score=106.66 Aligned_cols=136 Identities=21% Similarity=0.222 Sum_probs=97.4
Q ss_pred cccCCCcceEEEEEEecC-------CcEEEEEEeehhh------------h----------HHHHH----HHHHHHHHHh
Q 003855 507 NLLGTGSFGSVYKGTISD-------GTDVAIKIFNLQL------------E----------RAFRS----FDSECEVLRN 553 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~-------~~~vavK~~~~~~------------~----------~~~~~----~~~e~~~l~~ 553 (791)
..||.|.-+.||.|...+ +..+|||+.+... . ...+. .++|.+.|++
T Consensus 3 g~i~~GKEa~V~~~~~~~~~~~~~~~~~~avKi~r~~~~~Fk~~~~y~~~~~rf~~~~~k~~~~~~~~~wa~kE~r~L~r 82 (197)
T cd05146 3 GCISTGKESVVLHANGGSNETEQVIPTECAIKVFKTTLNEFKNRDKYIKDDYRFKDRFSKLNPRKIIRMWAEKEMHNLKR 82 (197)
T ss_pred CccccCcceEEEEEecCcccccccCCceEEEEEEeccceeEcChhhhccCCcccccCcCCCCHHHHHHHHHHHHHHHHHH
Confidence 579999999999998543 4799999875321 0 01122 3479999998
Q ss_pred ccC--CccceeeeeeccCCeeeEEEecCCCCCHHH-HHhhCCCCCCHHHHHHHHHHHHHHHHHH-HccCCCCCeEecCCC
Q 003855 554 VRH--RNLIKILSSCSNPDFKALVLEFMPNGSLEK-WLYSHNYFLDILERLNIMIDVGSALEYL-HHGHSSAPIIHCDLK 629 (791)
Q Consensus 554 l~h--~niv~l~~~~~~~~~~~lv~e~~~~g~L~~-~l~~~~~~~~~~~~~~i~~~i~~~l~~L-H~~~~~~~i~H~dlk 629 (791)
+.. -++.+++++ ...++||||+.++.+.. .+... .++..+...+..+++.++..+ | ..+++|||++
T Consensus 83 l~~~Gv~vP~pi~~----~~~~lvME~Ig~~~~~~~~Lkd~--~~~~~~~~~i~~~i~~~l~~l~H----~~glVHGDLs 152 (197)
T cd05146 83 MQKAGIPCPEVVVL----KKHVLVMSFIGDDQVPAPKLKDA--KLNDEEMKNAYYQVLSMMKQLYK----ECNLVHADLS 152 (197)
T ss_pred HHHcCCCCCeEEEe----cCCEEEEEEcCCCCccchhhhcc--ccCHHHHHHHHHHHHHHHHHHHH----hCCeecCCCC
Confidence 853 355566654 44689999997653322 22221 244556677889999999999 6 5689999999
Q ss_pred CCCeEeCCCCcEEEeeeccccccC
Q 003855 630 PTNILLDENMAAHVSDFGISKLLG 653 (791)
Q Consensus 630 ~~Nill~~~~~~kl~Dfgla~~~~ 653 (791)
+.||+++ ++.+.++|||.|....
T Consensus 153 ~~NIL~~-~~~v~iIDF~qav~~~ 175 (197)
T cd05146 153 EYNMLWH-DGKVWFIDVSQSVEPT 175 (197)
T ss_pred HHHEEEE-CCcEEEEECCCceeCC
Confidence 9999997 4689999999887543
No 479
>KOG3087 consensus Serine/threonine protein kinase [General function prediction only]
Probab=99.13 E-value=8.3e-10 Score=100.41 Aligned_cols=142 Identities=21% Similarity=0.251 Sum_probs=106.9
Q ss_pred cccccCCCcceEEEEEEecCCcEEEEEEeehhh--------hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEE
Q 003855 505 ECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQL--------ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVL 576 (791)
Q Consensus 505 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~ 576 (791)
....+-||+-+.|+++.+ .|+...||.-.... .-..+...+|++.+.+++--.|....-++.+...-.++|
T Consensus 11 ~l~likQGAEArv~~~~~-~Ge~~iIK~Rf~K~YRHP~LD~kLtr~Rt~~Ear~l~k~~~~GI~~P~l~~~D~~~~~i~M 89 (229)
T KOG3087|consen 11 SLELIKQGAEARVPRGSF-SGEAAIIKERFSKRYRHPALDQKLTRKRTKQEARLLAKCRALGIPAPRLIFIDTYGGQIYM 89 (229)
T ss_pred cceeeeccceeeEeeecc-CCceeEEeecccccccchHHHHHHHHHHHHHHHHHHHHHHHhCCCCceEEEEecCCCeEEE
Confidence 456788999999999998 57777777432221 122456778999999987666666666666777778999
Q ss_pred ecCCC-CCHHHHHhhCCCCCCHHH-HHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCC---cEEEeeeccccc
Q 003855 577 EFMPN-GSLEKWLYSHNYFLDILE-RLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENM---AAHVSDFGISKL 651 (791)
Q Consensus 577 e~~~~-g~L~~~l~~~~~~~~~~~-~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~---~~kl~Dfgla~~ 651 (791)
||++| .++.+++......-.... ....+..|-+.+.-|| ...|+|+||..+||++.+++ .+.++|||++..
T Consensus 90 E~~~g~~~vk~~i~~~~~~~~~d~~~~~~~~~iG~~igklH----~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~ 165 (229)
T KOG3087|consen 90 EFIDGASTVKDFILSTMEDESEDEGLAELARRIGELIGKLH----DNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSV 165 (229)
T ss_pred EeccchhHHHHHHHHHccCcccchhHHHHHHHHHHHHHHhh----hCCeecccccccceEEecCCCcCceEEEeecchhc
Confidence 99976 488899886533222333 3678899999999999 67899999999999997554 458999999864
No 480
>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]
Probab=99.13 E-value=7.9e-10 Score=101.33 Aligned_cols=131 Identities=23% Similarity=0.330 Sum_probs=102.3
Q ss_pred cccCCCcceEEEEEEecCCcEEEEEEeehhh--------hHHHHHHHHHHHHHHhccCCccceeeeeeccCCeeeEEEec
Q 003855 507 NLLGTGSFGSVYKGTISDGTDVAIKIFNLQL--------ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFKALVLEF 578 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~--------~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~~lv~e~ 578 (791)
..+++|+-+.+|.+.+. |.++++|.-.++. +-..+.-..|++++.+++--.|....-+..+++...++|||
T Consensus 2 ~~i~~GAEa~i~~~~~~-g~~av~K~Ri~K~YR~p~LD~klrr~Rt~~Earil~~a~~~GV~~P~v~dvD~~~~~I~me~ 80 (204)
T COG3642 2 DLIKQGAEAIIYLTDFL-GLPAVVKERIPKRYRHPELDEKLRRERTRREARILAKAREAGVPVPIVYDVDPDNGLIVMEY 80 (204)
T ss_pred chhhCCcceeEEeeecc-CcceEEEeecCcccCChHHHHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEcCCCCEEEEEE
Confidence 36889999999999874 4457777532221 11234567799999998776776666677788888999999
Q ss_pred CCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccc
Q 003855 579 MPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKL 651 (791)
Q Consensus 579 ~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~ 651 (791)
++|..|.+++... ...++..+-.-+.-|| ..+|+|+|+.++||++..+. +.++|||++.+
T Consensus 81 I~G~~lkd~l~~~--------~~~~~r~vG~~vg~lH----~~givHGDLTtsNiIl~~~~-i~~IDfGLg~~ 140 (204)
T COG3642 81 IEGELLKDALEEA--------RPDLLREVGRLVGKLH----KAGIVHGDLTTSNIILSGGR-IYFIDFGLGEF 140 (204)
T ss_pred eCChhHHHHHHhc--------chHHHHHHHHHHHHHH----hcCeecCCCccceEEEeCCc-EEEEECCcccc
Confidence 9999999888765 2456777888888999 78999999999999998765 99999999874
No 481
>KOG0601 consensus Cyclin-dependent kinase WEE1 [Cell cycle control, cell division, chromosome partitioning]
Probab=99.08 E-value=6.9e-11 Score=126.78 Aligned_cols=249 Identities=20% Similarity=0.151 Sum_probs=171.6
Q ss_pred HhhccccccccCCCcceEEEEEEec--CCcEEEEEEeehhhhHHHHH--HHHHHHHHHhc-cCCccceeeeeeccCCeee
Q 003855 499 ATDEFNECNLLGTGSFGSVYKGTIS--DGTDVAIKIFNLQLERAFRS--FDSECEVLRNV-RHRNLIKILSSCSNPDFKA 573 (791)
Q Consensus 499 ~~~~~~~~~~ig~G~~g~Vy~~~~~--~~~~vavK~~~~~~~~~~~~--~~~e~~~l~~l-~h~niv~l~~~~~~~~~~~ 573 (791)
-..+|..+..||.|.|+.|++...+ ++..|++|...........+ -..|+.+...+ -|.+++.....+..-+..+
T Consensus 263 ~~~df~~v~~i~~~~~~~~~~~~~r~~~~~~Y~~ke~~~~l~~~~~di~sl~ev~l~~~l~~~~~~~g~~~~W~~~r~~~ 342 (524)
T KOG0601|consen 263 KLTDFGLVSKISDGNFSSVFKVSKRPEGDCIYAAKELLNGLATFASDIFSLGEVILEAILGSHLPSVGKNSSWSQLRQGY 342 (524)
T ss_pred ecCCcceeEEccCCccccceeeeecCCCCceEeChhhhccccchHhhhcchhhhhHhhHhhcccccCCCCCCcccccccc
Confidence 3467888999999999999998754 67889999765433211111 12344444444 5888888877777777778
Q ss_pred EEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC-CcEEEeeecccccc
Q 003855 574 LVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN-MAAHVSDFGISKLL 652 (791)
Q Consensus 574 lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~-~~~kl~Dfgla~~~ 652 (791)
+--||+++++....... ...++...++++..|++.++.++| ++.++|+|+||+||++..+ +..+++|||.++.+
T Consensus 343 ip~e~~~~~s~~l~~~~-~~~~d~~~~~~~~~q~~~~l~~i~----s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~ 417 (524)
T KOG0601|consen 343 IPLEFCEGGSSSLRSVT-SQMLDEDPRLRLTAQILTALNVIH----SKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRL 417 (524)
T ss_pred CchhhhcCcchhhhhHH-HHhcCcchhhhhHHHHHhcccccc----chhhhcccccccceeeccchhhhhcccccccccc
Confidence 88999999988876632 223677788999999999999999 7899999999999999886 88899999998642
Q ss_pred CCCCCcceeeccccccccc--CCCccCCCCCCccccHHhHHHHHHHHHhCCCCCCccccCcchHHHHHHHhcCCChhhhc
Q 003855 653 GEGEDSVTQTMTMATIGYM--APEYGSEGIVSAKCDVYSYGVLLMETFTRKRPTDEMFTGEMSLRRWVKESLPHGLTEVV 730 (791)
Q Consensus 653 ~~~~~~~~~~~~~g~~~y~--aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 730 (791)
.- ........-+++ +|+......+-.++|+||||.-+.|.+++..--+. . ..|..- ..+
T Consensus 418 ~~-----~~~~~~~~~r~~p~~~~~~e~~~~~~~~~~~sl~~~~~e~~~~~~ls~~-~------~~~~~i--~~~----- 478 (524)
T KOG0601|consen 418 AF-----SSGVFHHIDRLYPIAEILLEDYPHLSKADIFSLGLSVDEAITGSPLSES-G------VQSLTI--RSG----- 478 (524)
T ss_pred ce-----ecccccccccccccchhhccccccccccccccccccccccccCcccCcc-c------ccceee--ecc-----
Confidence 11 111112233344 55666677888999999999999999998753211 0 011000 000
Q ss_pred chhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHHHHHHHHHHHH
Q 003855 731 DANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVTDAAAKLKKIK 780 (791)
Q Consensus 731 d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ev~~~L~~~~ 780 (791)
..+........+..+...+...++..||.+.+.....+..+
T Consensus 479 ---------~~p~~~~~~~~~q~~~kv~~~~~~~~~~l~~~l~~~~~~~~ 519 (524)
T KOG0601|consen 479 ---------DTPNLPGLKLQLQVLLKVMINPDRKRRPSAVELSLHSEFYR 519 (524)
T ss_pred ---------cccCCCchHHhhhhhhhhhcCCccccchhhhhhcccchhhh
Confidence 00000011245567888889999999999988876655443
No 482
>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins. This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain
Probab=99.07 E-value=8.9e-10 Score=110.52 Aligned_cols=143 Identities=22% Similarity=0.250 Sum_probs=110.4
Q ss_pred cccCCCcceEEEEEEecCCcEEEEEEeehhhh-HHHHHHHHHHHHHHhccC--CccceeeeeeccCC---eeeEEEecCC
Q 003855 507 NLLGTGSFGSVYKGTISDGTDVAIKIFNLQLE-RAFRSFDSECEVLRNVRH--RNLIKILSSCSNPD---FKALVLEFMP 580 (791)
Q Consensus 507 ~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~-~~~~~~~~e~~~l~~l~h--~niv~l~~~~~~~~---~~~lv~e~~~ 580 (791)
+.++.|..+.||++...+|+.+++|+...... .....+..|+++++.+++ ..+.+++.+..... ..++||||++
T Consensus 4 ~~l~~G~~n~~~~v~~~~g~~~ilK~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~~~~~~~~~~v~e~i~ 83 (223)
T cd05154 4 RQLSGGQSNLTYLLTAGGGRRLVLRRPPPGALLPSAHDVAREYRVLRALAGTGVPVPKVLALCEDPSVLGTPFYVMERVD 83 (223)
T ss_pred eecCCCccceEEEEEecCCcceEEEeCCCcccCcccccHHHHHHHHHHhhCCCCCCCCEEEECCCCCccCCceEEEEEeC
Confidence 57899999999999987778999998754432 134577889999999965 34567777776542 5689999999
Q ss_pred CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccC------------------------------------------
Q 003855 581 NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGH------------------------------------------ 618 (791)
Q Consensus 581 ~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~------------------------------------------ 618 (791)
|.++.+.+.. ..++..+...++.++++++.+||+..
T Consensus 84 G~~l~~~~~~--~~~~~~~~~~i~~~i~~~l~~lH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (223)
T cd05154 84 GRVLRDRLLR--PELSPEERRALARALADTLAALHSVDPAAVGLGDLGRPGGYLERQVARWRRQYDASRTDEPPAMERLL 161 (223)
T ss_pred CEecCCCCCC--CCCCHHHHHHHHHHHHHHHHHHhCCChhhcCCcccCCCCchHHHHHHHHHHHHHhhcccccHHHHHHH
Confidence 9888775532 23677788888899999999998410
Q ss_pred ----------CCCCeEecCCCCCCeEeCC--CCcEEEeeeccccc
Q 003855 619 ----------SSAPIIHCDLKPTNILLDE--NMAAHVSDFGISKL 651 (791)
Q Consensus 619 ----------~~~~i~H~dlk~~Nill~~--~~~~kl~Dfgla~~ 651 (791)
....++|+|+.+.||+++. ++.+.++||+.+..
T Consensus 162 ~~~~~~~~~~~~~~l~HgD~~~~Nil~~~~~~~~~~iID~e~~~~ 206 (223)
T cd05154 162 RWLEAHLPADSRPGLVHGDYRLGNVLFHPDEPRVVAVLDWELATL 206 (223)
T ss_pred HHHHhhCCCCCCcEEEECCCCcccEEEcCCCCcEEEEEecccccc
Confidence 1346899999999999998 66789999998764
No 483
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.06 E-value=1.5e-10 Score=135.14 Aligned_cols=131 Identities=25% Similarity=0.363 Sum_probs=84.7
Q ss_pred CCCCCeeecCCCc--ccccCCccccCCCCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCC
Q 003855 12 LQNLQYLVFAENN--LSGLVPPTIFNISTMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLV 89 (791)
Q Consensus 12 l~~L~~L~Ls~n~--l~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~ 89 (791)
.++|+.|-+.+|. +..+.++.|..++.|++|||++|.=-+.+|+.++. +-+|++|+|++..|+ .+|..++++++|.
T Consensus 544 ~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~-Li~LryL~L~~t~I~-~LP~~l~~Lk~L~ 621 (889)
T KOG4658|consen 544 NPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGE-LVHLRYLDLSDTGIS-HLPSGLGNLKKLI 621 (889)
T ss_pred CCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhh-hhhhhcccccCCCcc-ccchHHHHHHhhh
Confidence 3467777777775 55444445666777777777766544577777776 567777777777777 6777777777777
Q ss_pred EEeccCccccccccccccccccccccccccccccccCCCccccccccccCCCCCCcEEEcc
Q 003855 90 ALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFG 150 (791)
Q Consensus 90 ~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~ 150 (791)
+||+.++.-....++....|.+|++|.+.......- ...+..+..+.+|+.+...
T Consensus 622 ~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~------~~~l~el~~Le~L~~ls~~ 676 (889)
T KOG4658|consen 622 YLNLEVTGRLESIPGILLELQSLRVLRLPRSALSND------KLLLKELENLEHLENLSIT 676 (889)
T ss_pred eeccccccccccccchhhhcccccEEEeeccccccc------hhhHHhhhcccchhhheee
Confidence 777777765555566666677777777666551110 1123344555555555553
No 484
>KOG0606 consensus Microtubule-associated serine/threonine kinase and related proteins [Signal transduction mechanisms; General function prediction only]
Probab=99.03 E-value=3.4e-11 Score=135.41 Aligned_cols=252 Identities=21% Similarity=0.261 Sum_probs=169.6
Q ss_pred HHHhhccccccccCCCcceEEEEEEec-CCcEEEEEEeehhh---hHHHHHHHHHHHHHHhccCCccceeeeeeccCCee
Q 003855 497 QRATDEFNECNLLGTGSFGSVYKGTIS-DGTDVAIKIFNLQL---ERAFRSFDSECEVLRNVRHRNLIKILSSCSNPDFK 572 (791)
Q Consensus 497 ~~~~~~~~~~~~ig~G~~g~Vy~~~~~-~~~~vavK~~~~~~---~~~~~~~~~e~~~l~~l~h~niv~l~~~~~~~~~~ 572 (791)
+...+.+.+.+-+..|.++.++.++-. .|...+.|+..... +...+....+-.+.-..+||.++...--+......
T Consensus 800 rsS~d~~~i~~p~qS~sp~ss~p~~pa~sgh~~~~~v~~~ap~i~~~~~~s~r~~s~~~i~p~~P~v~~~~~s~~~rsP~ 879 (1205)
T KOG0606|consen 800 RSSPDGFEITKPSQSGSPSSSFPASPAGSGHTRPSKVHGLAPKIRTNDYESIRSKSNILITPRSPAVVRSFPSFPCRSPL 879 (1205)
T ss_pred cCCCccceecccccCCCCcccccCCccccccccchhhhccchhhccccccccCCccCccccCCCCceecccCCCCCCCCc
Confidence 445677888888999999999887643 34334444332211 12223333333333334567777666665566778
Q ss_pred eEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccccc
Q 003855 573 ALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLL 652 (791)
Q Consensus 573 ~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~ 652 (791)
++|++|..++++...++..+. .+..........+.++.+||| ...+.|||++|.|.+...++..+++|||.....
T Consensus 880 ~L~~~~~~~~~~~Skl~~~~~-~saepaRs~i~~~vqs~e~L~----s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~v 954 (1205)
T KOG0606|consen 880 PLVGHYLNGGDLPSKLHNSGC-LSAEPARSPILERVQSLESLH----SSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKV 954 (1205)
T ss_pred chhhHHhccCCchhhhhcCCC-cccccccchhHHHHhhhhccc----cchhhcccccccchhhcccCCcccCcccccccc
Confidence 999999999999999987653 444444455667888999999 556899999999999999999999999854322
Q ss_pred CCC---------------------C--------CcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCCC
Q 003855 653 GEG---------------------E--------DSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKRP 703 (791)
Q Consensus 653 ~~~---------------------~--------~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~p 703 (791)
... . ........+||+.|.|||...+......+|+|++|++++|.++|.+|
T Consensus 955 g~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~t~~~laPe~~lg~~hgs~ad~~~~g~~l~e~l~g~pp 1034 (1205)
T KOG0606|consen 955 GLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVGTPDYLAPEILLGRRHGSAADWWSSGVCLFEVLTGIPP 1034 (1205)
T ss_pred ccccCcCCcccccccCccccccccccccccccchhhccccccCCCcccCCcccccccCCCcchhhhhhhhhhhhhcCCCC
Confidence 110 0 00112334689999999999999999999999999999999999999
Q ss_pred CCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHhhccccCCCCCCCHH
Q 003855 704 TDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLALDCCIESPDMRINVT 770 (791)
Q Consensus 704 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~~cl~~~P~~RPt~~ 770 (791)
|....+... +.......+. -...+...+....+++...+..+|.+|..+.
T Consensus 1035 ~na~tpq~~-----f~ni~~~~~~------------~p~g~~~~s~~aq~~~~~ll~~~~~qr~~a~ 1084 (1205)
T KOG0606|consen 1035 FNAETPQQI-----FENILNRDIP------------WPEGPEEGSYEAQDLINRLLTEEPTQRLGAK 1084 (1205)
T ss_pred CCCcchhhh-----hhccccCCCC------------CCCCccccChhhhhhhhhhhccCchhccCcc
Confidence 976432211 1111111000 0011123345566888888899999998765
No 485
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.95 E-value=5.9e-10 Score=85.71 Aligned_cols=58 Identities=40% Similarity=0.554 Sum_probs=25.0
Q ss_pred CcEEeCCCCcCcccCCchhhhcCCCccEEEccCCcceecCCccCcCCCCCCEEeccCcc
Q 003855 39 MRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLVALDLGFNS 97 (791)
Q Consensus 39 L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~ 97 (791)
|++|++++|+|+ .+|...+..+++|++|++++|.|+.+.|.+|.++++|++|++++|+
T Consensus 3 L~~L~l~~n~l~-~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~ 60 (61)
T PF13855_consen 3 LESLDLSNNKLT-EIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNN 60 (61)
T ss_dssp ESEEEETSSTES-EECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSS
T ss_pred CcEEECCCCCCC-ccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCc
Confidence 444444444443 4443333334444444444444444444444444444444444443
No 486
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.94 E-value=7e-10 Score=129.72 Aligned_cols=288 Identities=23% Similarity=0.260 Sum_probs=129.2
Q ss_pred CCCcEEeCCCCcCcccCCchhhhcCCCccEEEccCCc--ceecCCccCcCCCCCCEEeccCccccccccccccccccccc
Q 003855 37 STMRILTLEGNQLSGRLPSTVGHLLPNIESLLLAANN--LTGIIPHSITNATKLVALDLGFNSFAGHILNTFGNLRHLSL 114 (791)
Q Consensus 37 ~~L~~L~L~~n~l~~~~p~~~~~~l~~L~~L~L~~N~--l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~ 114 (791)
...+.+.+-+|.+. .++..... ++|++|-+..|. +..+....|..++.|+.|||++|.-.+..|..+++|-+|++
T Consensus 523 ~~~rr~s~~~~~~~-~~~~~~~~--~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~Lry 599 (889)
T KOG4658|consen 523 NSVRRMSLMNNKIE-HIAGSSEN--PKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRY 599 (889)
T ss_pred hheeEEEEeccchh-hccCCCCC--CccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhc
Confidence 45555555555554 44443332 355566555553 44344444555666666666655554555556666666666
Q ss_pred cccccccccccCCCccccccccccCCCCCCcEEEccCCCCcccCChhhhhhhhhhhhhhcccccccccCCccccCCCCCC
Q 003855 115 LSQVMNNLTTESSSADQWSFLSSLTNCRNLTILSFGSNPLGGILPPVIGNFSASLQKFYAYECKLKGNIPQEIGNLSGLT 194 (791)
Q Consensus 115 L~l~~n~l~~~~~~~~~~~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~ 194 (791)
|++++..++.+| ..+.+|++|.+|++..+.-...+| .....+++|+
T Consensus 600 L~L~~t~I~~LP---------~~l~~Lk~L~~Lnl~~~~~l~~~~-------------------------~i~~~L~~Lr 645 (889)
T KOG4658|consen 600 LDLSDTGISHLP---------SGLGNLKKLIYLNLEVTGRLESIP-------------------------GILLELQSLR 645 (889)
T ss_pred ccccCCCccccc---------hHHHHHHhhheecccccccccccc-------------------------chhhhccccc
Confidence 666666655433 335556666666666554332221 1222334444
Q ss_pred EEEccCCccc--cccCccccCCCCCCEEEcccccCcccCCccccccCCCc----eEEecCCccCCCCCccccCCCCCcEE
Q 003855 195 LLSLHSNDLN--GTISPTMGRLKRLQGLSLRNNNLEGSIPYDLCHLKLMF----GIRLTGNKLSGHIPPCLVSLTSLREL 268 (791)
Q Consensus 195 ~L~L~~N~l~--~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~----~L~L~~N~i~~~~~~~~~~l~~L~~L 268 (791)
+|.+..-... ...-..+..+.+|+.|....... .+-..+..++.|. .+.+.++... ..+..+..+.+|+.|
T Consensus 646 ~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~--~~~e~l~~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L 722 (889)
T KOG4658|consen 646 VLRLPRSALSNDKLLLKELENLEHLENLSITISSV--LLLEDLLGMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEEL 722 (889)
T ss_pred EEEeeccccccchhhHHhhhcccchhhheeecchh--HhHhhhhhhHHHHHHhHhhhhcccccc-eeecccccccCcceE
Confidence 4444332211 11111222233333333322211 0001111111111 2222222222 233445566666666
Q ss_pred EcCCCcCCCCCCccccCC------CCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhcccccccccc
Q 003855 269 HLGSNKLTSSIPSSLWSL------EYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSL 342 (791)
Q Consensus 269 ~L~~N~l~~~~~~~~~~l------~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L 342 (791)
.+.++.+.......+... +++..+...++..- ..+.+..-.++|+.|.+..+.....+......+..++.+-+
T Consensus 723 ~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~~~~~-r~l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~ 801 (889)
T KOG4658|consen 723 SILDCGISEIVIEWEESLIVLLCFPNLSKVSILNCHML-RDLTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELIL 801 (889)
T ss_pred EEEcCCCchhhcccccccchhhhHHHHHHHHhhccccc-cccchhhccCcccEEEEecccccccCCCHHHHhhhcccEEe
Confidence 666666653322222111 12222222222111 12222233467788888877766566566666666666666
Q ss_pred ccccCCCC-CCcccCCCCCCcEEE
Q 003855 343 ARNQFQGP-IPESVGSLISLESLD 365 (791)
Q Consensus 343 ~~N~l~~~-~~~~~~~l~~L~~L~ 365 (791)
..+.+.+. .-...+.++++..+.
T Consensus 802 ~f~~~~~l~~~~~l~~l~~i~~~~ 825 (889)
T KOG4658|consen 802 PFNKLEGLRMLCSLGGLPQLYWLP 825 (889)
T ss_pred cccccccceeeecCCCCceeEecc
Confidence 66666644 233334444443333
No 487
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.93 E-value=7.1e-10 Score=85.28 Aligned_cols=61 Identities=43% Similarity=0.544 Sum_probs=51.8
Q ss_pred CCccEEEccCCcceecCCccCcCCCCCCEEeccCccccccccccccccccccccccccccc
Q 003855 62 PNIESLLLAANNLTGIIPHSITNATKLVALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNL 122 (791)
Q Consensus 62 ~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l 122 (791)
|+|++|++++|+|+.+.+..|.++++|++|++++|+++.+.++.|.++++|++|++++|+|
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 5788999999999988888899999999999999999888888888888888887777764
No 488
>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]
Probab=98.86 E-value=7.1e-08 Score=98.64 Aligned_cols=263 Identities=13% Similarity=0.069 Sum_probs=162.9
Q ss_pred cccccCCCcceEEEEEEecCCcEEEEEEeehhhhHHHHHHHHHHHHHHhc-cCCccceeeee------ecc-CCeeeEEE
Q 003855 505 ECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQLERAFRSFDSECEVLRNV-RHRNLIKILSS------CSN-PDFKALVL 576 (791)
Q Consensus 505 ~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l-~h~niv~l~~~------~~~-~~~~~lv~ 576 (791)
..+.+|+|+-+.+|-.-- -...+.|++......... +.+..|... .||-+-.=+.| ..+ +....+.|
T Consensus 15 ~gr~LgqGgea~ly~l~e--~~d~VAKIYh~Pppa~~a---qk~a~la~~p~~p~~~~rvaWPqa~L~G~~~~~~iGflm 89 (637)
T COG4248 15 PGRPLGQGGEADLYTLGE--VRDQVAKIYHAPPPAAQA---QKVAELAATPDAPLLNYRVAWPQATLHGGRRGKVIGFLM 89 (637)
T ss_pred CCccccCCccceeeecch--hhchhheeecCCCchHHH---HHHHHhccCCCCcchhhhhcccHHHhhCCCccceeEEec
Confidence 356799999999986421 122345776544322111 123344443 56644331221 112 23366788
Q ss_pred ecCCCC-CHHHHHh-----hCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeecccc
Q 003855 577 EFMPNG-SLEKWLY-----SHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISK 650 (791)
Q Consensus 577 e~~~~g-~L~~~l~-----~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~ 650 (791)
..+.+. ....+.. .+-...+|....++++.+|.+.+.|| ..|.+-+|+.++|+|+.+++.|.+.|-..-.
T Consensus 90 P~v~g~~pI~~~y~p~tRRqs~P~~~w~fllrvaRnlA~aFA~lH----~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfq 165 (637)
T COG4248 90 PKVSGKEPIHMIYSPATRRQSYPHCAWDFLLRVARNLASAFATLH----EHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQ 165 (637)
T ss_pred ccCCCccchhhhcCchhhcccCCccccHHHHHHHHHHHHHHHHHH----hcCCcccccCccceeeecCceEEEEccccee
Confidence 877654 2333332 11223789999999999999999999 6788899999999999999999999854333
Q ss_pred ccCCCCCcceeecccccccccCCCcc-----CCCCCCccccHHhHHHHHHHHHhC-CCCCCccccCc---chHHHHHHHh
Q 003855 651 LLGEGEDSVTQTMTMATIGYMAPEYG-----SEGIVSAKCDVYSYGVLLMETFTR-KRPTDEMFTGE---MSLRRWVKES 721 (791)
Q Consensus 651 ~~~~~~~~~~~~~~~g~~~y~aPE~~-----~~~~~~~~~Dv~s~G~vl~elltg-~~p~~~~~~~~---~~~~~~~~~~ 721 (791)
.-. ........+|...|.+||.- .+...+...|-|.+||++++++.| +.||.+..... ..+..-+..
T Consensus 166 i~~---ng~~~~cpVg~~eftPPElQ~~~sf~g~~r~~~hD~FGLavLiF~lL~ggrHPysGI~~~~~ap~p~E~~Ia~- 241 (637)
T COG4248 166 INA---NGTLHLCPVGVSEFTPPELQTLPSFVGFERTANHDNFGLAVLIFHLLFGGRHPYSGIPLISDAPNPLETDIAH- 241 (637)
T ss_pred ecc---CCceEecccCccccCCHHHhccccccccCCCccccchhHHHHHHHHHhcCCCCCCcccccCCCCCcchhhhhc-
Confidence 321 12234456899999999953 344567789999999999999986 89997643211 111100000
Q ss_pred cCCChhhhcchhhhhhH----HhhHHHHHHHHHHHHHHhhccccC--CCCCCCHHHHHHHHHHHHHHhcc
Q 003855 722 LPHGLTEVVDANLVREE----QAFSAKMDCILSIMDLALDCCIES--PDMRINVTDAAAKLKKIKVKFLD 785 (791)
Q Consensus 722 ~~~~~~~~~d~~~~~~~----~~~~~~~~~~~~l~~li~~cl~~~--P~~RPt~~ev~~~L~~~~~~~~~ 785 (791)
..+.+..-...+ ...+...-.++.+..+..+|+... |.-|||++..+..|..++++...
T Consensus 242 -----g~f~ya~~~~~g~~p~P~~~P~~~Lpp~vqAlF~qaF~~~~~~~~RP~a~aW~aAl~al~~~L~~ 306 (637)
T COG4248 242 -----GRFAYASDQRRGLKPPPRSIPLSMLPPDVQALFQQAFTESGVATPRPTAKAWVAALDALRQQLKK 306 (637)
T ss_pred -----ceeeechhccCCCCCCCCCCChhhcCHHHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHhhhh
Confidence 000010000000 111222345566778888998764 56899999999999999887643
No 489
>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.
Probab=98.80 E-value=3.1e-08 Score=94.49 Aligned_cols=125 Identities=23% Similarity=0.278 Sum_probs=82.5
Q ss_pred EEEEEEecCCcEEEEEEeehhh--------------------------hHHHHHHHHHHHHHHhccCC--ccceeeeeec
Q 003855 516 SVYKGTISDGTDVAIKIFNLQL--------------------------ERAFRSFDSECEVLRNVRHR--NLIKILSSCS 567 (791)
Q Consensus 516 ~Vy~~~~~~~~~vavK~~~~~~--------------------------~~~~~~~~~e~~~l~~l~h~--niv~l~~~~~ 567 (791)
.||.|...+|..+|||+..... ........+|.+.|.++..- ++.+++++.
T Consensus 1 ~Vy~~~~~~~~~~a~K~~r~~~~~Fk~~~~y~~~~~r~~~~~~~~~~~~~~~~~~~~E~~~L~~l~~~Gv~vP~p~~~~- 79 (188)
T PF01163_consen 1 DVYHAIDPDGEEVAVKIYRTGRTSFKRRKKYRDYDYRFKKYRHKSSWRYLIREWAKKEFRNLKRLYEAGVPVPKPYDYN- 79 (188)
T ss_dssp EEEEEEECTTEEEEEEEE-S---SS-HHHHHTTTSTTSTTC--G--CHHHHHHHHHHHHHHHHHCCCTT-SS--EEEEE-
T ss_pred CEEEEECCCCCEEEEEEeccCceEEEEeeeeecccchhcccccccCHHHHHHHHHHHHHHHHHHHHHCCccCCcEEEEe-
Confidence 3899998899999999875320 01134567899999999755 455666553
Q ss_pred cCCeeeEEEecCC--CCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHH-HccCCCCCeEecCCCCCCeEeCCCCcEEEe
Q 003855 568 NPDFKALVLEFMP--NGSLEKWLYSHNYFLDILERLNIMIDVGSALEYL-HHGHSSAPIIHCDLKPTNILLDENMAAHVS 644 (791)
Q Consensus 568 ~~~~~~lv~e~~~--~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~L-H~~~~~~~i~H~dlk~~Nill~~~~~~kl~ 644 (791)
...+||||++ |..+..+.... ++......++.+++..+..+ | ..+++|+|+.+.||+++++ .+.++
T Consensus 80 ---~~~ivME~I~~~G~~~~~l~~~~---~~~~~~~~~~~~il~~~~~~~~----~~givHGDLs~~NIlv~~~-~~~iI 148 (188)
T PF01163_consen 80 ---RNVIVMEYIGEDGVPLPRLKDVD---LSPEEPKELLEEILEEIIKMLH----KAGIVHGDLSEYNILVDDG-KVYII 148 (188)
T ss_dssp ---TTEEEEE--EETTEEGGCHHHCG---GGGSTHHHHHHHHHHHHHHHHH----CTTEEESS-STTSEEEETT-CEEE-
T ss_pred ---CCEEEEEecCCCccchhhHHhcc---ccchhHHHHHHHHHHHHHHHHH----hcCceecCCChhhEEeecc-eEEEE
Confidence 2479999998 55554433321 11234556777888866664 6 6799999999999999988 99999
Q ss_pred eecccccc
Q 003855 645 DFGISKLL 652 (791)
Q Consensus 645 Dfgla~~~ 652 (791)
|||.|...
T Consensus 149 Df~qav~~ 156 (188)
T PF01163_consen 149 DFGQAVDS 156 (188)
T ss_dssp -GTTEEET
T ss_pred ecCcceec
Confidence 99988754
No 490
>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional
Probab=98.77 E-value=1.1e-07 Score=96.46 Aligned_cols=138 Identities=14% Similarity=0.091 Sum_probs=97.3
Q ss_pred cCCCcceEEEEEEecCCcEEEEEEeehhhhH-HHH----------HHHHHHHHHHhccCCccc--eeeeeecc-----CC
Q 003855 509 LGTGSFGSVYKGTISDGTDVAIKIFNLQLER-AFR----------SFDSECEVLRNVRHRNLI--KILSSCSN-----PD 570 (791)
Q Consensus 509 ig~G~~g~Vy~~~~~~~~~vavK~~~~~~~~-~~~----------~~~~e~~~l~~l~h~niv--~l~~~~~~-----~~ 570 (791)
+-.-....|.+..+ +|+.|.||........ ..+ .+.+|...+.++...+|. .++++... ..
T Consensus 30 v~~~~~rrvvr~~~-~g~~~~vKr~~~~~~~~~~k~l~~~~~p~~~a~rE~~~l~~L~~~GIptP~pVa~~e~~~~~~~~ 108 (268)
T PRK15123 30 FRELEGRRTLRFEL-AGKSYFLKWHRGTGWGEIFKNLLSLRMPVLGADREWRAIHRLHEVGVDTMTGVAFGERGSNPATR 108 (268)
T ss_pred EecCCCceEEEEEE-CCEEEEEEEecCCcHHHHhhhhcccccccHHHHHHHHHHHHHHHcCCCCCCeeEEEEecCCCccc
Confidence 33333344667666 6788999977433211 111 367888888888533333 33444432 23
Q ss_pred eeeEEEecCCCC-CHHHHHhhC-CCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCC-------CCcE
Q 003855 571 FKALVLEFMPNG-SLEKWLYSH-NYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDE-------NMAA 641 (791)
Q Consensus 571 ~~~lv~e~~~~g-~L~~~l~~~-~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~-------~~~~ 641 (791)
..++|+|++++. +|.+++... ....+...+..++.+++..+.-|| ..+|+|+|++++|||++. ++.+
T Consensus 109 ~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll~~la~~i~~LH----~~Gi~HgDL~~~NiLl~~~~~~~~~~~~~ 184 (268)
T PRK15123 109 TSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLIKRVATMVRDMH----AAGINHRDCYICHFLLHLPFPGREEDLKL 184 (268)
T ss_pred eeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHHHHHHHHHHHHH----HCcCccCCCChhhEEEeccccCCCCCceE
Confidence 467999999876 899988632 223456677789999999999999 789999999999999975 5689
Q ss_pred EEeeeccccc
Q 003855 642 HVSDFGISKL 651 (791)
Q Consensus 642 kl~Dfgla~~ 651 (791)
.++||+.++.
T Consensus 185 ~LIDl~r~~~ 194 (268)
T PRK15123 185 SVIDLHRAQI 194 (268)
T ss_pred EEEECCcccc
Confidence 9999998854
No 491
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.76 E-value=1.1e-10 Score=125.65 Aligned_cols=129 Identities=32% Similarity=0.333 Sum_probs=79.3
Q ss_pred CCcEEEcCCCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCc-chhcccccccccc
Q 003855 264 SLRELHLGSNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPS-TIGALKDLETLSL 342 (791)
Q Consensus 264 ~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~-~~~~l~~L~~L~L 342 (791)
.|.+.+.+.|++. ....++.-++.|+.|+|++|+++... .+..++.|+.|||++|.+. .+|. ...++. |+.|.+
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v~--~Lr~l~~LkhLDlsyN~L~-~vp~l~~~gc~-L~~L~l 239 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKVD--NLRRLPKLKHLDLSYNCLR-HVPQLSMVGCK-LQLLNL 239 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhhH--HHHhcccccccccccchhc-cccccchhhhh-heeeee
Confidence 3566666667665 44455666666777777777766442 5666677777777777776 3343 223333 777777
Q ss_pred ccccCCCCCCcccCCCCCCcEEEccCCccCCCC-chhhhhcccCceEEccCCCCcccC
Q 003855 343 ARNQFQGPIPESVGSLISLESLDLSGNNLSGKI-PKSLETLSQLKQFNVSHNRLEGEI 399 (791)
Q Consensus 343 ~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~-~~~~~~l~~L~~l~l~~N~l~~~~ 399 (791)
++|.++. + ..+.++.+|+.||+++|-|.+-- -..+..|..|+.|+|.||++.+.+
T Consensus 240 rnN~l~t-L-~gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~c~p 295 (1096)
T KOG1859|consen 240 RNNALTT-L-RGIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLCCAP 295 (1096)
T ss_pred cccHHHh-h-hhHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccccCH
Confidence 7777662 2 34566777777777777665422 133455666777777777776644
No 492
>KOG3741 consensus Poly(A) ribonuclease subunit [RNA processing and modification]
Probab=98.75 E-value=3.7e-07 Score=96.09 Aligned_cols=165 Identities=21% Similarity=0.240 Sum_probs=124.3
Q ss_pred eEEEEEEec-CCcEEEEEEeehhhhHHHHHHHHHHHHHHhccCCccceeeeeec----cCCeeeEEEecCCC-CCHHHHH
Q 003855 515 GSVYKGTIS-DGTDVAIKIFNLQLERAFRSFDSECEVLRNVRHRNLIKILSSCS----NPDFKALVLEFMPN-GSLEKWL 588 (791)
Q Consensus 515 g~Vy~~~~~-~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~h~niv~l~~~~~----~~~~~~lv~e~~~~-g~L~~~l 588 (791)
.+.|++..+ ||..|++|++.............-++.++++.|+|+|++.+++. .....++||+|.++ ++|.++-
T Consensus 290 ~Ttyk~~s~~DG~~YvLkRlhg~r~~~~nk~t~lve~wkkl~h~NvV~frevf~t~tF~D~SlvlvYDYyP~s~TL~d~~ 369 (655)
T KOG3741|consen 290 ITTYKATSNVDGNAYVLKRLHGDRDQSTNKDTSLVEAWKKLCHTNVVPFREVFLTYTFGDLSLVLVYDYYPSSPTLYDLY 369 (655)
T ss_pred ceeEeeeeccCCceeeeeeeccccccCcccchHHHHHHHHhccCceeehhhhhhhhccCcceEEEEEecCCCCchHHHHH
Confidence 577898854 89999999995543332223334578899999999999998875 34567899999875 3666544
Q ss_pred hh--------------CCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCC
Q 003855 589 YS--------------HNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGE 654 (791)
Q Consensus 589 ~~--------------~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~ 654 (791)
.. .+...++..+|.++.|++.||.++| +.|..-+-+.+++|+++.+.+++|+..|....+..
T Consensus 370 F~~~~~t~~~n~~~~~~~~~~~e~~lW~y~~QLtaaL~sIH----ssGLAck~L~~~kIlv~G~~RIriS~C~i~Dvl~~ 445 (655)
T KOG3741|consen 370 FANPPFTKRTNSFYPSQNLKAPEEVLWSYISQLTAALYSIH----SSGLACKTLDLKKILVTGKMRIRISGCGIMDVLQE 445 (655)
T ss_pred ccCCccccccccccccCCCCchHHHHHHHHHHHHHHHHHHH----hcCceeecccHhHeEeeCcceEEEecccceeeecC
Confidence 31 1233678899999999999999999 67888899999999999999999998888766543
Q ss_pred CCCcceeecccccccccCCCccCCCCCCccccHHhHHHHHHHHHhCCC
Q 003855 655 GEDSVTQTMTMATIGYMAPEYGSEGIVSAKCDVYSYGVLLMETFTRKR 702 (791)
Q Consensus 655 ~~~~~~~~~~~g~~~y~aPE~~~~~~~~~~~Dv~s~G~vl~elltg~~ 702 (791)
+.. |.+.+ ..+-|.-.||.+++.|.||..
T Consensus 446 d~~----------------~~le~---~Qq~D~~~lG~ll~aLAt~~~ 474 (655)
T KOG3741|consen 446 DPT----------------EPLES---QQQNDLRDLGLLLLALATGTE 474 (655)
T ss_pred CCC----------------cchhH---HhhhhHHHHHHHHHHHhhccc
Confidence 320 11111 135699999999999999964
No 493
>COG0478 RIO-like serine/threonine protein kinase fused to N-terminal HTH domain [Signal transduction mechanisms]
Probab=98.74 E-value=9.2e-08 Score=93.34 Aligned_cols=134 Identities=22% Similarity=0.232 Sum_probs=95.7
Q ss_pred cccccccCCCcceEEEEEEecCCcEEEEEEeehhh----------------------hHHHHHHHHHHHHHHhccCC--c
Q 003855 503 FNECNLLGTGSFGSVYKGTISDGTDVAIKIFNLQL----------------------ERAFRSFDSECEVLRNVRHR--N 558 (791)
Q Consensus 503 ~~~~~~ig~G~~g~Vy~~~~~~~~~vavK~~~~~~----------------------~~~~~~~~~e~~~l~~l~h~--n 558 (791)
..+.+.||-|.-+.||.|....|.++|||.-.... .-.....++|.++|.++... .
T Consensus 93 e~iG~~IGvGKEsdVY~~~~~~g~~~~vKfHR~GrtsFrkvk~~R~y~~~~~h~sWl~~sRl~A~rEf~~L~~L~~~G~~ 172 (304)
T COG0478 93 EAIGTKIGVGKESDVYVAIDPKGRKVAVKFHRLGRTSFRKVKRNRDYLADKEHGSWLYVSRLAAEREFEALQRLYPEGVK 172 (304)
T ss_pred HhhccccccCccceEEEEECCCCCEEEEEEeecCchhhhhhcchhhhhccccCcchhhhHHHHHHHHHHHHHHhhhcCCC
Confidence 45668999999999999999999999999543210 01233567889999988544 6
Q ss_pred cceeeeeeccCCeeeEEEecCCCCCHHHHHhhCCCCCCHHHHHHHHHHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCC
Q 003855 559 LIKILSSCSNPDFKALVLEFMPNGSLEKWLYSHNYFLDILERLNIMIDVGSALEYLHHGHSSAPIIHCDLKPTNILLDEN 638 (791)
Q Consensus 559 iv~l~~~~~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~i~~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~ 638 (791)
+.+.+++ +...+||||++|-.|...- ++......++..|+.-+.-.- ..||||+|+.+-||+++++
T Consensus 173 VP~P~~~----nRHaVvMe~ieG~eL~~~r------~~~en~~~il~~il~~~~~~~----~~GiVHGDlSefNIlV~~d 238 (304)
T COG0478 173 VPKPIAW----NRHAVVMEYIEGVELYRLR------LDVENPDEILDKILEEVRKAY----RRGIVHGDLSEFNILVTED 238 (304)
T ss_pred CCCcccc----ccceeeeehcccceeeccc------CcccCHHHHHHHHHHHHHHHH----HcCccccCCchheEEEecC
Confidence 6666655 4567999999986665421 123333344444544444443 3579999999999999999
Q ss_pred CcEEEeeecccc
Q 003855 639 MAAHVSDFGISK 650 (791)
Q Consensus 639 ~~~kl~Dfgla~ 650 (791)
|.+.++||--+.
T Consensus 239 g~~~vIDwPQ~v 250 (304)
T COG0478 239 GDIVVIDWPQAV 250 (304)
T ss_pred CCEEEEeCcccc
Confidence 999999996554
No 494
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.66 E-value=1.9e-09 Score=116.44 Aligned_cols=158 Identities=24% Similarity=0.229 Sum_probs=108.7
Q ss_pred CccccCCCCCCeeecCCCcccccCCccccC---------------------------------CCCCcEEeCCCCcCccc
Q 003855 6 PTEIGNLQNLQYLVFAENNLSGLVPPTIFN---------------------------------ISTMRILTLEGNQLSGR 52 (791)
Q Consensus 6 p~~~~~l~~L~~L~Ls~n~l~~~~~~~~~~---------------------------------l~~L~~L~L~~n~l~~~ 52 (791)
|-.|..+.+|++|.|.++.|... ..+.. ...|...+.+.|++. .
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~~--~GL~~lr~qLe~LIC~~Sl~Al~~v~ascggd~~ns~~Wn~L~~a~fsyN~L~-~ 178 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLSTA--KGLQELRHQLEKLICHNSLDALRHVFASCGGDISNSPVWNKLATASFSYNRLV-L 178 (1096)
T ss_pred CceeccccceeeEEecCcchhhh--hhhHHHHHhhhhhhhhccHHHHHHHHHHhccccccchhhhhHhhhhcchhhHH-h
Confidence 56788899999999999988521 11111 124556666777775 5
Q ss_pred CCchhhhcCCCccEEEccCCcceecCCccCcCCCCCCEEeccCccccccccccccccccccccccccccccccCCCcccc
Q 003855 53 LPSTVGHLLPNIESLLLAANNLTGIIPHSITNATKLVALDLGFNSFAGHILNTFGNLRHLSLLSQVMNNLTTESSSADQW 132 (791)
Q Consensus 53 ~p~~~~~~l~~L~~L~L~~N~l~~~~~~~~~~l~~L~~L~L~~N~i~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~ 132 (791)
+.+.+ ++++.|+.|+|++|+++.. ..+..+++|++|||++|++..++--...+.. |..|.+++|.++++.
T Consensus 179 mD~SL-qll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~------ 248 (1096)
T KOG1859|consen 179 MDESL-QLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLR------ 248 (1096)
T ss_pred HHHHH-HHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhh------
Confidence 54443 3478888888888888854 3778888888888888888755443334443 888888888888754
Q ss_pred ccccccCCCCCCcEEEccCCCCcccCChhhhhhhhhhhhhhccccccc
Q 003855 133 SFLSSLTNCRNLTILSFGSNPLGGILPPVIGNFSASLQKFYAYECKLK 180 (791)
Q Consensus 133 ~~~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~l~~n~l~ 180 (791)
.+.+|++|+-||+++|-|.+.---.+--...+|+.|+|.+|.+-
T Consensus 249 ----gie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 249 ----GIENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ----hHHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCccc
Confidence 37788888888888888775422222222356788888888765
No 495
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.60 E-value=2.2e-09 Score=92.34 Aligned_cols=133 Identities=27% Similarity=0.306 Sum_probs=80.4
Q ss_pred CcEEEcCCCcCCCCCCc---cccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccc
Q 003855 265 LRELHLGSNKLTSSIPS---SLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLS 341 (791)
Q Consensus 265 L~~L~L~~N~l~~~~~~---~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~ 341 (791)
+..++|++|++. .+++ .+.....|+..+|++|.+.+..+..-...+.++.|+|++|.|+ .+|.++..++.|+.|+
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aam~aLr~lN 106 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFKKFPKKFTIKFPTATTLNLANNEIS-DVPEELAAMPALRSLN 106 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhhhCCHHHhhccchhhhhhcchhhhh-hchHHHhhhHHhhhcc
Confidence 455566666654 2222 2333445555667777665433333334556777777777777 5676777777777777
Q ss_pred cccccCCCCCCcccCCCCCCcEEEccCCccCCCCchhhhhcccCceEEccCCCCcccCCC
Q 003855 342 LARNQFQGPIPESVGSLISLESLDLSGNNLSGKIPKSLETLSQLKQFNVSHNRLEGEIPV 401 (791)
Q Consensus 342 L~~N~l~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~l~l~~N~l~~~~~~ 401 (791)
++.|.+. ..|..+..+.+|-.||..+|.+. .+|..+-.-......++.+++|.+..+.
T Consensus 107 l~~N~l~-~~p~vi~~L~~l~~Lds~~na~~-eid~dl~~s~~~al~~lgnepl~~~~~~ 164 (177)
T KOG4579|consen 107 LRFNPLN-AEPRVIAPLIKLDMLDSPENARA-EIDVDLFYSSLPALIKLGNEPLGDETKK 164 (177)
T ss_pred cccCccc-cchHHHHHHHhHHHhcCCCCccc-cCcHHHhccccHHHHHhcCCcccccCcc
Confidence 7777777 66777777777777777777776 4443332223333445566667666553
No 496
>KOG2137 consensus Protein kinase [Signal transduction mechanisms]
Probab=98.58 E-value=2.2e-08 Score=109.18 Aligned_cols=151 Identities=17% Similarity=0.253 Sum_probs=103.2
Q ss_pred HHHHHHHHHHHccCCCCCeEecCCCCCCeEeCCCCcEEEeeeccccccCCCCCcce-------eecccccccccCCCccC
Q 003855 605 IDVGSALEYLHHGHSSAPIIHCDLKPTNILLDENMAAHVSDFGISKLLGEGEDSVT-------QTMTMATIGYMAPEYGS 677 (791)
Q Consensus 605 ~~i~~~l~~LH~~~~~~~i~H~dlk~~Nill~~~~~~kl~Dfgla~~~~~~~~~~~-------~~~~~g~~~y~aPE~~~ 677 (791)
.+++.|+.|+|. +.++||++|.|++|.++..+.+||+.|+.+........+.. .........|.|||++.
T Consensus 106 ~~v~dgl~flh~---sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f~apE~~~ 182 (700)
T KOG2137|consen 106 GNVADGLAFLHR---SAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNFLAPEYLL 182 (700)
T ss_pred hcccchhhhhcc---CcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCcccccchhhc
Confidence 345599999994 67899999999999999999999999999876544222111 11123466799999999
Q ss_pred CCCCCccccHHhHHHHHHHHHhCCCC-CCccccCcchHHHHHHHhcCCChhhhcchhhhhhHHhhHHHHHHHHHHHHHHh
Q 003855 678 EGIVSAKCDVYSYGVLLMETFTRKRP-TDEMFTGEMSLRRWVKESLPHGLTEVVDANLVREEQAFSAKMDCILSIMDLAL 756 (791)
Q Consensus 678 ~~~~~~~~Dv~s~G~vl~elltg~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~l~~li~ 756 (791)
+...+.++|+||+||++|.+..|..+ +... .....+.. ... .+ +-..+......+.++.+=+.
T Consensus 183 ~~~~~~~sd~fSlG~li~~i~~~gk~i~~a~-~~~~~~~~-~~~---------~~-----~~~~~~~s~~~p~el~~~l~ 246 (700)
T KOG2137|consen 183 GTTNTPASDVFSLGVLIYTIYNGGKSIIAAN-GGLLSYSF-SRN---------LL-----NAGAFGYSNNLPSELRESLK 246 (700)
T ss_pred cccccccccceeeeeEEEEEecCCcchhhcc-CCcchhhh-hhc---------cc-----ccccccccccCcHHHHHHHH
Confidence 98999999999999999999954443 3321 11111000 000 00 00011112356778888999
Q ss_pred hccccCCCCCCCHHHHHH
Q 003855 757 DCCIESPDMRINVTDAAA 774 (791)
Q Consensus 757 ~cl~~~P~~RPt~~ev~~ 774 (791)
+++..++..||++.++..
T Consensus 247 k~l~~~~~~rp~~~~l~~ 264 (700)
T KOG2137|consen 247 KLLNGDSAVRPTLDLLLS 264 (700)
T ss_pred HHhcCCcccCcchhhhhc
Confidence 999999999997766543
No 497
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.54 E-value=9.6e-09 Score=98.58 Aligned_cols=186 Identities=19% Similarity=0.191 Sum_probs=102.7
Q ss_pred ccCCCCCCEEEcccccCcccCCcc----ccccCCCceEEecCCccCCCCCc-------------cccCCCCCcEEEcCCC
Q 003855 211 MGRLKRLQGLSLRNNNLEGSIPYD----LCHLKLMFGIRLTGNKLSGHIPP-------------CLVSLTSLRELHLGSN 273 (791)
Q Consensus 211 ~~~l~~L~~L~L~~N~l~~~~~~~----~~~l~~L~~L~L~~N~i~~~~~~-------------~~~~l~~L~~L~L~~N 273 (791)
+..+++|+..+||.|.+....|.. +++-+.|.+|.|++|.+....-. -..+-|.|++.....|
T Consensus 88 Llkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGlGp~aG~rigkal~~la~nKKaa~kp~Le~vicgrN 167 (388)
T COG5238 88 LLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGLGPIAGGRIGKALFHLAYNKKAADKPKLEVVICGRN 167 (388)
T ss_pred HhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCCCccchhHHHHHHHHHHHHhhhccCCCceEEEeccc
Confidence 444555555555555555443332 23345555555555554311111 1234567888888888
Q ss_pred cCCCCCCc-----cccCCCCCCeEEccCCcCcccCC-----cccccCCCCCEEecCCcccCCCCC----cchhccccccc
Q 003855 274 KLTSSIPS-----SLWSLEYILDINLSSNSLNDSLP-----SNVQKLKVLTVLDLSRNQLSGDIP----STIGALKDLET 339 (791)
Q Consensus 274 ~l~~~~~~-----~~~~l~~L~~L~l~~N~i~~~~~-----~~~~~l~~L~~L~l~~N~l~~~~~----~~~~~l~~L~~ 339 (791)
++.. .+. .+..-.+|+.+.+..|.|....- ..+..+.+|+.|||..|-++.... ..++.++.|++
T Consensus 168 Rlen-gs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La~al~~W~~lrE 246 (388)
T COG5238 168 RLEN-GSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLADALCEWNLLRE 246 (388)
T ss_pred hhcc-CcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHHHHhcccchhhh
Confidence 8863 222 22333577888888887753211 123445778888888888774322 34455677777
Q ss_pred cccccccCCCCCCccc------CCCCCCcEEEccCCccCCCCchh-----h--hhcccCceEEccCCCCcc
Q 003855 340 LSLARNQFQGPIPESV------GSLISLESLDLSGNNLSGKIPKS-----L--ETLSQLKQFNVSHNRLEG 397 (791)
Q Consensus 340 L~L~~N~l~~~~~~~~------~~l~~L~~L~l~~N~l~~~~~~~-----~--~~l~~L~~l~l~~N~l~~ 397 (791)
|.+..|-++.....++ ...++|..|-..+|.+.+.+-.. + ..+|-|..|.+.+|++..
T Consensus 247 L~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~E 317 (388)
T COG5238 247 LRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRIKE 317 (388)
T ss_pred ccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcchh
Confidence 7777777765433322 12466777777777665432211 1 234555555666666543
No 498
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.54 E-value=3e-08 Score=96.48 Aligned_cols=40 Identities=33% Similarity=0.421 Sum_probs=18.7
Q ss_pred CCCCcEEEccCCccCCC-CchhhhhcccCceEEccCCCCcc
Q 003855 358 LISLESLDLSGNNLSGK-IPKSLETLSQLKQFNVSHNRLEG 397 (791)
Q Consensus 358 l~~L~~L~l~~N~l~~~-~~~~~~~l~~L~~l~l~~N~l~~ 397 (791)
++.+..|+|+.|+|... .-+.+.++++|..|.+++|+|..
T Consensus 223 ~p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d 263 (418)
T KOG2982|consen 223 FPSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSD 263 (418)
T ss_pred CCcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccc
Confidence 34444445555554321 12344455555555555555543
No 499
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.53 E-value=2e-08 Score=96.38 Aligned_cols=196 Identities=21% Similarity=0.242 Sum_probs=110.3
Q ss_pred ccccCCCCCCcEEEccCCCCcccCChhhhhhhhhhhhhhcccccccccCCccccCCCCCCEEEccCCccccccCcc----
Q 003855 135 LSSLTNCRNLTILSFGSNPLGGILPPVIGNFSASLQKFYAYECKLKGNIPQEIGNLSGLTLLSLHSNDLNGTISPT---- 210 (791)
Q Consensus 135 ~~~l~~l~~L~~L~L~~N~l~~~~~~~~~~~~~~L~~L~l~~n~l~~~~~~~~~~l~~L~~L~L~~N~l~~~~~~~---- 210 (791)
++++-+||+|+..+||.|.+....|+.+..+ +++-+.|..|.|++|.+..+.-.-
T Consensus 85 l~aLlkcp~l~~v~LSDNAfg~~~~e~L~d~---------------------is~~t~l~HL~l~NnGlGp~aG~rigka 143 (388)
T COG5238 85 LKALLKCPRLQKVDLSDNAFGSEFPEELGDL---------------------ISSSTDLVHLKLNNNGLGPIAGGRIGKA 143 (388)
T ss_pred HHHHhcCCcceeeeccccccCcccchHHHHH---------------------HhcCCCceeEEeecCCCCccchhHHHHH
Confidence 4567889999999999999987777666554 456677888888888775322222
Q ss_pred ---------ccCCCCCCEEEcccccCcccCCcc-----ccccCCCceEEecCCccCCCCC-----ccccCCCCCcEEEcC
Q 003855 211 ---------MGRLKRLQGLSLRNNNLEGSIPYD-----LCHLKLMFGIRLTGNKLSGHIP-----PCLVSLTSLRELHLG 271 (791)
Q Consensus 211 ---------~~~l~~L~~L~L~~N~l~~~~~~~-----~~~l~~L~~L~L~~N~i~~~~~-----~~~~~l~~L~~L~L~ 271 (791)
.+.-|.|++.+...|++.. .+.. +..-.+|+.+.+..|.|....- ..+..+.+|+.|+|.
T Consensus 144 l~~la~nKKaa~kp~Le~vicgrNRlen-gs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlq 222 (388)
T COG5238 144 LFHLAYNKKAADKPKLEVVICGRNRLEN-GSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQ 222 (388)
T ss_pred HHHHHHHhhhccCCCceEEEeccchhcc-CcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeecc
Confidence 2344677777777777762 2221 2222466666666666652211 112234455555555
Q ss_pred CCcCCCCCCccccCCCCCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchh------ccccccccccccc
Q 003855 272 SNKLTSSIPSSLWSLEYILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIG------ALKDLETLSLARN 345 (791)
Q Consensus 272 ~N~l~~~~~~~~~~l~~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~------~l~~L~~L~L~~N 345 (791)
.|-++..... .+...++..+.|+.|.+..|-++......+- ..++|..|-..+|
T Consensus 223 DNtft~~gS~--------------------~La~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yn 282 (388)
T COG5238 223 DNTFTLEGSR--------------------YLADALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYN 282 (388)
T ss_pred ccchhhhhHH--------------------HHHHHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchh
Confidence 5555421110 1112333344455555555555543333221 2455666666666
Q ss_pred cCCCCCCcc-------cCCCCCCcEEEccCCccC
Q 003855 346 QFQGPIPES-------VGSLISLESLDLSGNNLS 372 (791)
Q Consensus 346 ~l~~~~~~~-------~~~l~~L~~L~l~~N~l~ 372 (791)
...+.+-.. -.+++-|..|-+.+|+|.
T Consensus 283 e~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~~ 316 (388)
T COG5238 283 ERRGGIILDISLNEFEQDAVPLLVDLERNGNRIK 316 (388)
T ss_pred hhcCceeeeechhhhhhcccHHHHHHHHccCcch
Confidence 555322111 135677888888888887
No 500
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.49 E-value=9.2e-09 Score=88.55 Aligned_cols=59 Identities=25% Similarity=0.396 Sum_probs=28.9
Q ss_pred CCCeEEccCCcCcccCCcccccCCCCCEEecCCcccCCCCCcchhccccccccccccccCC
Q 003855 288 YILDINLSSNSLNDSLPSNVQKLKVLTVLDLSRNQLSGDIPSTIGALKDLETLSLARNQFQ 348 (791)
Q Consensus 288 ~L~~L~l~~N~i~~~~~~~~~~l~~L~~L~l~~N~l~~~~~~~~~~l~~L~~L~L~~N~l~ 348 (791)
.++.|+|++|+|+ .+|..+..++.|+.|++++|.+. ..|..+..+.+|..|+..+|.+.
T Consensus 78 t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 78 TATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred hhhhhhcchhhhh-hchHHHhhhHHhhhcccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 4444444444444 23444555555555555555554 44444444555555555555544
Done!