BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003859
(791 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F4IAE9|Y1591_ARATH ATPase family AAA domain-containing protein At1g05910
OS=Arabidopsis thaliana GN=At1g05910 PE=2 SV=1
Length = 1210
Score = 1006 bits (2600), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 543/713 (76%), Positives = 600/713 (84%), Gaps = 14/713 (1%)
Query: 1 MYSKRSGQGDGSVPGPVRTSDRLRRRPKILGRTYLYY---NPIRPRKSKTKARTAASQIA 57
M+ KRS QGDGSV PVRTSDRLRRRPK+ GR+YLYY N + RK TK RTAASQIA
Sbjct: 1 MHPKRSSQGDGSVTKPVRTSDRLRRRPKLHGRSYLYYSSPNMLHNRKRNTKTRTAASQIA 60
Query: 58 RMFGPGKRTVRTSNKNSVPLNLRRSTRKRRISVNLEDYTDSSGSEDEDLMRPSYRPLRNR 117
+M G R R SN + +LRRSTRKRRISVNLEDYTDSSG+EDED+M P+YR LR R
Sbjct: 61 KMLHKGNRPARASNAAPIASDLRRSTRKRRISVNLEDYTDSSGAEDEDMMSPAYRTLRRR 120
Query: 118 MRNNMSQDELSPSKRKKVVEAKPTPRREGLRPRRSMVATRKQLNLDSGDEQGSSEEKVGQ 177
+ N S SK +K ++A+ PRREGLRPRRS K+L +SG +Q +SEEK GQ
Sbjct: 121 VHKNFST-----SKSRKDMDAELAPRREGLRPRRSTTIANKRLKTESGADQDTSEEKDGQ 175
Query: 178 DETENGNESDNDADDGQNEIEGDGEAEAEDEGEGEDEEDGDDEEGEEEQEG---RRRYDL 234
DETENGNE D DADDG+NE+E + E EDEG+GEDE + D ++ EE E R+RYDL
Sbjct: 176 DETENGNELD-DADDGENEVEAEDEGNGEDEGDGEDEGEEDGDDDEEGDEEQEGRKRYDL 234
Query: 235 RNRAEVRRLSVEE--GKQRPRSPRRVLHQGIGTKVGRDVRKGGSRVLKRHRLARAEDSDD 292
RNRAEVRR+ E +Q+PRSPRRVLHQG+GT+VGRD R+GGSR KRHR R +DSDD
Sbjct: 235 RNRAEVRRMPTGEINKQQQPRSPRRVLHQGMGTRVGRDGRRGGSRPHKRHRFTRTDDSDD 294
Query: 293 SLLVDELDQGPAIPWGRGGSRSGPPWLFGGLEMHGTTAWGLNVAASGWGHQGDTLAALTS 352
SLLVDELDQGPAIPW RGG+RSG PWLFGGL+ +G+++ GLNV ASGWGHQ D LAALTS
Sbjct: 295 SLLVDELDQGPAIPWARGGNRSGAPWLFGGLDTYGSSSLGLNVGASGWGHQSDGLAALTS 354
Query: 353 GIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITP 412
G+QTAGPSSKGGADIQPLQ++E ++FDDIGGLSEYI+ LKEMVFFPLLYP+FFASY ITP
Sbjct: 355 GVQTAGPSSKGGADIQPLQINEDINFDDIGGLSEYINDLKEMVFFPLLYPEFFASYSITP 414
Query: 413 PRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEE 472
PRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEE
Sbjct: 415 PRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEE 474
Query: 473 AQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDA 532
AQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDA
Sbjct: 475 AQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDA 534
Query: 533 IDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADL 592
IDGALRRPGRFDREFNF LPGCEARAEILDIHTRKWK PP+RELK ELAA+CVGYCGADL
Sbjct: 535 IDGALRRPGRFDREFNFSLPGCEARAEILDIHTRKWKHPPTRELKEELAATCVGYCGADL 594
Query: 593 KALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSR 652
KALCTEAAIRAFREKYPQVYTSDDK+ IDV V VEK HF+EAMS ITPAAHRG+ V SR
Sbjct: 595 KALCTEAAIRAFREKYPQVYTSDDKYAIDVGLVNVEKSHFVEAMSAITPAAHRGSVVQSR 654
Query: 653 PLSLVVAPCLQRHLQKAMNYISDIFPPLGMSSELTKLCMLSHGSAIPLVYRPR 705
PLS VV PCL RHL ++M+ ISDIFP SSELTKL +L+ GSAIPLVYRPR
Sbjct: 655 PLSPVVLPCLHRHLLESMSLISDIFPSSATSSELTKLSILTFGSAIPLVYRPR 707
>sp|Q6PL18|ATAD2_HUMAN ATPase family AAA domain-containing protein 2 OS=Homo sapiens
GN=ATAD2 PE=1 SV=1
Length = 1390
Score = 407 bits (1047), Expect = e-112, Method: Compositional matrix adjust.
Identities = 190/314 (60%), Positives = 237/314 (75%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+Q+D SV FD +GGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 412 ADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGT 471
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ ++V+F+MRKGAD LSKWVGE+ERQL+LLF++A + +PSIIFFD
Sbjct: 472 GKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFD 531
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLDSRG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 532 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFD 591
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP EAR EIL IHTR W P ELA +CVGYCGAD+K++C EAA+ A
Sbjct: 592 REFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYCGADIKSICAEAALCAL 651
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+YT+ +K +D+ S+ + F AM + PA+ R T + LS VV P LQ
Sbjct: 652 RRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPASQRAVTSPGQALSTVVKPLLQN 711
Query: 665 HLQKAMNYISDIFP 678
+ K + + +FP
Sbjct: 712 TVDKILEALQRVFP 725
>sp|Q8CDM1|ATAD2_MOUSE ATPase family AAA domain-containing protein 2 OS=Mus musculus
GN=Atad2 PE=1 SV=1
Length = 1040
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 199/387 (51%), Positives = 254/387 (65%), Gaps = 36/387 (9%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+Q+D SV FD +GGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 67 ADVDPMQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGT 126
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ ++V+F+MRKGAD LSKWVGE+ERQL+LLF++A + +P+IIFFD
Sbjct: 127 GKTLVARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFD 186
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLDSRG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 187 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFD 246
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP AR EIL IHTR W P ELA CVGYCGAD+K++C EAA+ A
Sbjct: 247 REFLFSLPDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYCGADIKSICAEAALCAL 306
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+YT+ +K +D+ S+T+ F A+ I PA+ R T + LS +V P LQ
Sbjct: 307 RRRYPQIYTTSEKLQLDLSSITISAKDFEAALQKIRPASQRAVTSPGQALSAIVKPLLQN 366
Query: 665 HLQKAMNYISDIFPP------------------------------------LGMSSELTK 688
+ + ++ + +FP L L
Sbjct: 367 TVHRILDALQKVFPHVEVGTNKSLNSDVSCPFLESDLAYSDDDTPSVYENGLSQKENLNF 426
Query: 689 LCMLSHGSAIPLVYRPRLLLCGSEGTG 715
L + + P+ +RPRLL+ G G G
Sbjct: 427 LHLNRNACYQPMSFRPRLLIVGEPGFG 453
>sp|Q9ULI0|ATD2B_HUMAN ATPase family AAA domain-containing protein 2B OS=Homo sapiens
GN=ATAD2B PE=1 SV=3
Length = 1458
Score = 403 bits (1036), Expect = e-111, Method: Compositional matrix adjust.
Identities = 206/393 (52%), Positives = 251/393 (63%), Gaps = 42/393 (10%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+ +D+SV FD IGGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 386 ADVDPMNIDKSVRFDSIGGLSHHIHALKEMVVFPLLYPEIFEKFKIQPPRGCLFYGPPGT 445
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ +KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSIIFFD
Sbjct: 446 GKTLVARALANECSQGDKKVAFFMRKGADCLSKWVGESERQLRLLFDQAYLMRPSIIFFD 505
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLD+RG++V+IGATNR+D+ID ALRRPGRFD
Sbjct: 506 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDNRGEIVVIGATNRLDSIDPALRRPGRFD 565
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP +AR IL IHTR W S ELA CVGYCGAD+KALCTEAA+ A
Sbjct: 566 REFLFNLPDQKARKHILQIHTRDWNPKLSDAFLGELAEKCVGYCGADIKALCTEAALIAL 625
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+Y S K +DV S+ + F AM I PA+ R LS ++ P L+R
Sbjct: 626 RRRYPQIYASSHKLQLDVSSIVLSAQDFYHAMQNIVPASQRAVMSSGHALSPIIRPLLER 685
Query: 665 HLQKAMNYISDIFPPLGMSSELTK----------------LCML------------SHGS 696
+ + +FP +S K L + S +
Sbjct: 686 SFNNILAVLQKVFPHAEISQSDKKEDIETLILEDSEDENALSIFETNCHSGSPKKQSSSA 745
Query: 697 AI--------------PLVYRPRLLLCGSEGTG 715
AI P YRPRLLL G G+G
Sbjct: 746 AIHKPYLHFTMSPYHQPTSYRPRLLLSGERGSG 778
>sp|Q5RDX4|ATAD2_PONAB ATPase family AAA domain-containing protein 2 OS=Pongo abelii
GN=ATAD2 PE=2 SV=1
Length = 1091
Score = 400 bits (1027), Expect = e-110, Method: Compositional matrix adjust.
Identities = 190/314 (60%), Positives = 236/314 (75%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ P+Q+D SV FD +GGLS +I ALKEMV FPLLYP+ F + I PPRG L GPPGT
Sbjct: 243 ADVDPMQLDSSVRFDSVGGLSNHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGT 302
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA S+ ++V+F+MRKGAD LSKWVGE+ERQL+LLF++A + +PSIIFFD
Sbjct: 303 GKTLVARALANECSQGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPSIIFFD 362
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSS+Q+QIH+SIVSTLLALMDGLDSRG++V+IGATNR+DAID ALRRPGRFD
Sbjct: 363 EIDGLAPVRSSRQDQIHSSIVSTLLALMDGLDSRGEIVVIGATNRLDAIDPALRRPGRFD 422
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF F LP EAR EIL IHTR W P ELA +CVGY GAD+K++C EAA+ A
Sbjct: 423 REFLFSLPDKEARKEILKIHTRDWNPKPLDTFLEELAENCVGYRGADIKSICAEAALCAL 482
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQR 664
R +YPQ+YT+ +K +D+ S+ + F AM + PA+ R T + LS VV P LQ
Sbjct: 483 RRRYPQIYTTSEKLQLDLSSINISAKDFEVAMQKMIPASQRAVTSPGQALSTVVKPLLQN 542
Query: 665 HLQKAMNYISDIFP 678
+ K + + +FP
Sbjct: 543 TVDKILEALQRVFP 556
>sp|P40340|TBP7_YEAST Tat-binding homolog 7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YTA7 PE=1 SV=2
Length = 1379
Score = 398 bits (1022), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/315 (60%), Positives = 240/315 (76%), Gaps = 3/315 (0%)
Query: 365 ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGT 424
AD+ PL VD +V+FDDIGGL YID LKEMV PLLYP+ + +++ITPPRGVL GPPGT
Sbjct: 399 ADLDPLGVDMNVNFDDIGGLDNYIDQLKEMVALPLLYPELYQNFNITPPRGVLFHGPPGT 458
Query: 425 GKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFD 484
GKTL+ARALA + S +K++F+MRKGAD+LSKWVGEAERQL+LLFEEA+++QPSIIFFD
Sbjct: 459 GKTLMARALAASCSSDERKITFFMRKGADILSKWVGEAERQLRLLFEEAKKHQPSIIFFD 518
Query: 485 EIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFD 544
EIDGLAPVRSSKQEQIH SIVSTLLALMDG+D+RGQV++IGATNR DA+D ALRRPGRFD
Sbjct: 519 EIDGLAPVRSSKQEQIHASIVSTLLALMDGMDNRGQVIVIGATNRPDAVDPALRRPGRFD 578
Query: 545 REFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAF 604
REF FPLP +AR +IL I TRKW P S +LA GY GADL++LCTEAA+ +
Sbjct: 579 REFYFPLPDVKARFKILQIQTRKWSSPLSTNFIDKLAFLTKGYGGADLRSLCTEAALISI 638
Query: 605 REKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQ- 663
+ +PQ+Y S+DK L+D + V+ F+ A+ I P++ R +PL ++ P L
Sbjct: 639 QRSFPQIYRSNDKLLVDPSKIKVKVSDFMLALKKIVPSSARSTGSSPQPLPELIKPLLAD 698
Query: 664 --RHLQKAMNYISDI 676
+L+ ++Y+ +I
Sbjct: 699 QLNNLKNKLDYMLNI 713
>sp|O14114|YEJJ_SCHPO Uncharacterized AAA domain-containing protein C31G5.19
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC31G5.19 PE=3 SV=1
Length = 1190
Score = 391 bits (1005), Expect = e-108, Method: Compositional matrix adjust.
Identities = 209/389 (53%), Positives = 260/389 (66%), Gaps = 19/389 (4%)
Query: 346 TLAALTSGIQTAGPSSKGG-------ADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFP 398
T+ ALT + GP G AD PL VD S+SF+ +GGL YI+ LKEMV P
Sbjct: 226 TIKALTDPANSGGPPDFGRIREKSDLADSDPLGVDSSLSFESVGGLDNYINQLKEMVMLP 285
Query: 399 LLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKW 458
LLYP+ F +++ PPRGVL GPPGTGKTL+ARALA A S +KVSFYMRKGAD LSKW
Sbjct: 286 LLYPEIFQRFNMQPPRGVLFHGPPGTGKTLMARALAAACSSENKKVSFYMRKGADCLSKW 345
Query: 459 VGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSR 518
VGEAERQL+LLFEEA+ QPSIIFFDEIDGLAPVRSSKQEQIH SIVSTLLALMDG++SR
Sbjct: 346 VGEAERQLRLLFEEAKSTQPSIIFFDEIDGLAPVRSSKQEQIHASIVSTLLALMDGMESR 405
Query: 519 GQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKS 578
GQV++IGATNR DA+D ALRRPGRFDREF FPLP +AR +I++IHTR W P L S
Sbjct: 406 GQVIIIGATNRPDAVDPALRRPGRFDREFYFPLPDRDARKKIIEIHTRNWDPPVPEWLCS 465
Query: 579 ELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMST 638
LA GY GADL+ALCTEAA+ + + YPQ+Y S + ID ++ V+ F+ +M
Sbjct: 466 MLAEKSKGYGGADLRALCTEAALNSIKRTYPQLYRSTKRLQIDPKTIKVKVKDFVMSMKR 525
Query: 639 ITPAAHRGATVHSRPLSLVVAPCL-------QRHLQKAMNYISDIFPPLGMSSELTKLCM 691
+ P++ R + S+PLS + P L ++ LQK M S + P + + K
Sbjct: 526 MIPSSERSSISPSKPLSPELKPLLNEAFQDIEKTLQKLMPVASKLNPLEEVMYDDPKEND 585
Query: 692 LSHGSAIPL-----VYRPRLLLCGSEGTG 715
+ + +Y+PR L+CG +G G
Sbjct: 586 FEYQQRLETFETLRIYKPRFLICGRKGLG 614
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAER 464
F + I PR L+CG G G+T AL A + + V + +L E
Sbjct: 595 FETLRIYKPR-FLICGRKGLGQT----ALGPAILQQYEGVHVQSFDMSTLLQDSTQSIET 649
Query: 465 QLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLI 524
+ LF E +R+ PSII+ +ID V + + ++T ++++ LD Q++ +
Sbjct: 650 SIIHLFLEVRRHTPSIIYIPDIDNWLNV-------LPLTAITTFSSMLERLDFSDQILFL 702
Query: 525 GATN 528
++
Sbjct: 703 ALSS 706
>sp|A8X0L9|TBP7_CAEBR Tat-binding homolog 7 OS=Caenorhabditis briggsae GN=lex-1 PE=3 SV=2
Length = 1285
Score = 380 bits (975), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/361 (53%), Positives = 246/361 (68%), Gaps = 17/361 (4%)
Query: 362 KGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGP 421
+G +DI P+ VD SV FD +GGLS +I +LKE+V FP+LYP+ FA + I PP+GV+ GP
Sbjct: 388 QGASDIDPMSVDSSVGFDQVGGLSHHIQSLKEVVLFPMLYPEVFAKFKINPPKGVVFYGP 447
Query: 422 PGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSII 481
PGTGKTL+ARALA + KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSII
Sbjct: 448 PGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSII 507
Query: 482 FFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPG 541
FFDEIDGLAPVRSSKQ+QIH SIVSTLLALMDGLD RG+VV+IGATNR+D++D ALRRPG
Sbjct: 508 FFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDSLDPALRRPG 567
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQ-PPSRELKSELAASCVGYCGADLKALCTEAA 600
RFDRE F LP AR ILDIHT KW++ P+ E +A GYCGADLK LCTE+
Sbjct: 568 RFDRELRFSLPDLNARRHILDIHTSKWEENKPTPETLDGIAEKTSGYCGADLKFLCTESV 627
Query: 601 IRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAP 660
+ R +YP +Y ++ +D+ ++ + + HF AM ITPA+ R T+ SRPL +
Sbjct: 628 LIGLRSRYPHIYMCSERLKLDITTIKITEEHFGHAMRRITPASRRDLTIPSRPLDERTSI 687
Query: 661 CLQRHLQKAMNYISDIFPP---------LGMSSELTKLC-MLSHGSAIPLVYRPRLLLCG 710
L ++ N IS P S+EL ++ L +P + RLLLCG
Sbjct: 688 LLGDIVK---NLISLRIPQGYRCVENAMATASTELEQVVRALEPNLTVPAI---RLLLCG 741
Query: 711 S 711
S
Sbjct: 742 S 742
>sp|P54816|TBP7_CAEEL Tat-binding homolog 7 OS=Caenorhabditis elegans GN=lex-1 PE=1 SV=3
Length = 1291
Score = 379 bits (973), Expect = e-104, Method: Compositional matrix adjust.
Identities = 195/362 (53%), Positives = 241/362 (66%), Gaps = 17/362 (4%)
Query: 362 KGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGP 421
+G +DI P+ VD SV FD +GGL +I +LKE+V FP+LYP+ F + I PP+GV+ GP
Sbjct: 374 QGASDIDPMSVDSSVGFDQVGGLGHHIQSLKEVVLFPMLYPEVFEKFRINPPKGVVFYGP 433
Query: 422 PGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSII 481
PGTGKTL+ARALA + KV+F+MRKGAD LSKWVGE+ERQL+LLF++A +PSII
Sbjct: 434 PGTGKTLVARALANECRRGANKVAFFMRKGADCLSKWVGESERQLRLLFDQAYAMRPSII 493
Query: 482 FFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPG 541
FFDEIDGLAPVRSSKQ+QIH SIVSTLLALMDGLD RG+VV+IGATNR+D +D ALRRPG
Sbjct: 494 FFDEIDGLAPVRSSKQDQIHASIVSTLLALMDGLDGRGEVVVIGATNRLDTLDPALRRPG 553
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQ-PPSRELKSELAASCVGYCGADLKALCTEAA 600
RFDRE F LP AR +ILDIHT KW++ P E +A GYCGADLK LCTEA
Sbjct: 554 RFDRELRFSLPDLNARRQILDIHTSKWEENKPIPETLDAIAERTSGYCGADLKFLCTEAV 613
Query: 601 IRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLSLVVAP 660
+ R +YP +Y ++ +DV ++ + HF AM ITPA+ R T+ SRPL +
Sbjct: 614 LIGLRSRYPHIYMCSERLKLDVATIKITSEHFGHAMRRITPASRRDLTIPSRPLDERTSI 673
Query: 661 CLQRHLQKAMNYISDIFPP---------LGMSSELTKLC-MLSHGSAIPLVYRPRLLLCG 710
L N IS P SSEL ++ L +P + RLLLCG
Sbjct: 674 LLG---DTVSNLISLRIPQGYRCVENAMATASSELEQVVRALEPNPTVPAI---RLLLCG 727
Query: 711 SE 712
SE
Sbjct: 728 SE 729
>sp|Q9C0W2|YHI5_SCHPO Uncharacterized AAA domain-containing protein P22H7.05c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=pi026 PE=3 SV=1
Length = 1201
Score = 363 bits (932), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 201/396 (50%), Positives = 251/396 (63%), Gaps = 15/396 (3%)
Query: 332 GLNVAASGWGHQGDTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDAL 391
GLN A + G D A +S + K P E++ F+ IGGL + I L
Sbjct: 326 GLN-AYNNLGASSDIENAPSSQLHFGHIDEKTIRSTDPFANRENLDFNSIGGLEDIILQL 384
Query: 392 KEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKG 451
KEMV PLLYP+ F HITPPRGVL GPPGTGKTL+AR LA S QK+SF++RKG
Sbjct: 385 KEMVMLPLLYPEVFLHLHITPPRGVLFHGPPGTGKTLMARVLAANCSTKNQKISFFLRKG 444
Query: 452 ADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLAL 511
+D LSKWVGEAERQL+LLFEEA+R QPSIIFFDEIDGLAP+RSSKQEQ H+SIVSTLLAL
Sbjct: 445 SDCLSKWVGEAERQLRLLFEEARRVQPSIIFFDEIDGLAPIRSSKQEQTHSSIVSTLLAL 504
Query: 512 MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKW--K 569
MDGLD+RGQVV+IGATNR + +D ALRRPGRFDREF FPLP +AR +IL+I++ + K
Sbjct: 505 MDGLDTRGQVVVIGATNRPNDLDPALRRPGRFDREFYFPLPNKQARMKILEINSLHFSPK 564
Query: 570 QPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEK 629
P S L LA S GY GADLKALCTEAA+ A R +PQ+YTS DKFLID++ ++V
Sbjct: 565 IPESYLL--HLAESTSGYGGADLKALCTEAALNAVRRTFPQIYTSSDKFLIDLNEISVSI 622
Query: 630 YHFIEAMSTITPAAHRGATVHSRPLSLVVAPCLQRHLQKAMNYIS-----DIFPPLGMSS 684
F+ A I + R + P++ ++ ++ + I D++ P S
Sbjct: 623 CDFVVASEKIAVSTRRSDVKPNIPITDSHKILFKKSIEVITSKIRRLLKLDVYLPTVESL 682
Query: 685 ELTKLCMLSHGSAI-----PLVYRPRLLLCGSEGTG 715
+ L I + +RPRLL+ G G
Sbjct: 683 QKLPAEELMRQKEINSLKTTMSFRPRLLITDIYGYG 718
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 245 bits (626), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 129/276 (46%), Positives = 173/276 (62%), Gaps = 7/276 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL E + ++EM+ P+ +P+ F I PP+GVLL GPPGTGKTL+A+A+A
Sbjct: 176 VTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIEPPKGVLLVGPPGTGKTLLAKAVAN 235
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
A +FY+ G +++SK+VGE E L+ +FEEA+ N PSIIF DEID +AP R
Sbjct: 236 EAG-----ANFYVINGPEIMSKYVGETEENLRKIFEEAEENAPSIIFIDEIDAIAPKRDE 290
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +V+ LL LMDGL RGQVV+IGATNR +A+D ALRRPGRFDRE +P E
Sbjct: 291 ATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNALDPALRRPGRFDREIVIGVPDRE 350
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHTR +L LA G+ GADL ALC EAA+RA R P +
Sbjct: 351 GRKEILQIHTRNMPLAEDVDLDY-LADVTHGFVGADLAALCKEAAMRALRRVLPSIDLEA 409
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVH 650
++ +V D++ V F EA+ + P+A R V
Sbjct: 410 EEIPKEVLDNLKVTMDDFKEALKDVEPSAMREVLVE 445
Score = 195 bits (496), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 105/233 (45%), Positives = 145/233 (62%), Gaps = 7/233 (3%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V ++DIGGL E L+E V +PL + F + PP+GVLL GPPGTGKTL+A+A+A
Sbjct: 448 NVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGVLLFGPPGTGKTLLAKAVA 507
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
+ +F KG ++ SKWVGE+E+ ++ +F +A+++ P IIFFDEID +AP R
Sbjct: 508 NESG-----ANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCIIFFDEIDAIAPKRG 562
Query: 495 SK-QEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
+ + +V+ LL +DG++ VV+I ATNR D ID AL RPGR DR P+P
Sbjct: 563 RDLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLRPGRLDRVILVPVPD 622
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
+AR +I IHTR L+ ELA GY GAD++ALC EAA+ A RE
Sbjct: 623 EKARLDIFKIHTRSMNLAEDVNLE-ELAKKTEGYTGADIEALCREAAMLAVRE 674
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 243 bits (621), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 128/276 (46%), Positives = 178/276 (64%), Gaps = 7/276 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL + ++EM+ PL +P+ F I PP+GVLL GPPGTGKTLIA+A+A
Sbjct: 179 VTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGVLLYGPPGTGKTLIAKAVAN 238
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
F G +++SK+ GE+E++L+ +FEEA+ N PSIIF DEID +AP R
Sbjct: 239 EVD-----AHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAPKREE 293
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +V+ LLALMDGL++RG V++I ATNR DAID ALRRPGRFDRE +P E
Sbjct: 294 VTGEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEIGVPDKE 353
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL+IHTRK +L+ ELA G+ GADL+ALC EAA+ A R P++
Sbjct: 354 GRKEILEIHTRKMPLAEDVDLE-ELAELTNGFVGADLEALCKEAAMHALRRVLPEIDIEA 412
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVH 650
++ +V +++ V + F+EA+ I P+A R V
Sbjct: 413 EEIPAEVIENLKVTREDFMEALKNIEPSAMREVLVE 448
Score = 199 bits (505), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 114/270 (42%), Positives = 161/270 (59%), Gaps = 10/270 (3%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V ++DIGGL L E V +PL YP+ F + +I PPRG+LL GPPGTGKTL+A+A+A
Sbjct: 451 NVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGILLFGPPGTGKTLLAKAVA 510
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
++ +F KG ++LSKWVGE+E+ ++ +F +A++ P +IFFDEID LAP R
Sbjct: 511 NESN-----ANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVIFFDEIDSLAPRRG 565
Query: 495 S-KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
+ +VS LL +DGL+ VV+I ATNR D ID AL RPGR +R P P
Sbjct: 566 GIGDSHVTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLRPGRLERHIYIPPPD 625
Query: 554 CEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+AR EI IH R +P + ++ ELA GY GAD++A+C EA + A RE
Sbjct: 626 KKARVEIFKIHLR--GKPLADDVNIEELAEKTEGYSGADIEAVCREAGMLAIRELIKPGM 683
Query: 613 TSDDKFLIDVDSVTVEKYHFIEAMSTITPA 642
T ++ + + K HF EA+ + P+
Sbjct: 684 TREEAKEA-AKKLKITKKHFEEALKKVRPS 712
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 235 bits (599), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/279 (44%), Positives = 177/279 (63%), Gaps = 11/279 (3%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DD+GG+ + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVA- 264
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ F E ++N P+I+F DEID +AP R
Sbjct: 265 --NETG--AFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKREK 320
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL +R VV+I ATNR ++IDGALRR GRFDRE + +P
Sbjct: 321 AHGEVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 380
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A C G+ GADL +LC+EAAI+ REK + D
Sbjct: 381 GRLEILRIHTKNMKLGEDVDLE-QVANECHGFVGADLASLCSEAAIQQIREKMELIDLED 439
Query: 616 DKF---LIDVDSVTVEKYHFIEAMSTITPAAHRGATVHS 651
D +++ +VT+E + F AM +P+A R A V +
Sbjct: 440 DTIDAEVLNSLAVTMENFRF--AMGKSSPSALREAVVET 476
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/238 (37%), Positives = 138/238 (57%), Gaps = 15/238 (6%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+ ++ DIGGL L+E+V +P+ +P+ + + + P RGVL GPPG GKTL+A+A+A
Sbjct: 478 NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 537
Query: 435 --CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPV 492
C A +F KG ++L+ W GE+E ++ +F++A+ P ++FFDE+D +A
Sbjct: 538 NECQA-------NFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKA 590
Query: 493 RSSKQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNF 549
R + +++ +L MDG++++ V +IGATNR D ID A+ RPGR D+
Sbjct: 591 RGGSVGDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYI 650
Query: 550 PLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFRE 606
PLP +R +I R K P S +L + LA + VG+ GADL +C A A RE
Sbjct: 651 PLPDEASRLQIFKASLR--KTPLSADLDLNFLAKNTVGFSGADLTEICQRACKLAIRE 706
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 234 bits (598), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 124/279 (44%), Positives = 179/279 (64%), Gaps = 11/279 (3%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
+ +DD+GG+ + + +KEMV PL +P F + I PPRG+LL GPPGTGKTLIARA+A
Sbjct: 207 IGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIARAVA- 265
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +V+SK GE+E L+ FEE ++NQP+I+F DEID +AP R
Sbjct: 266 --NETGS--FFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKREK 321
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDG+ R +V+I ATNR ++IDGALRR GRFDRE + +P
Sbjct: 322 TNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGIPDAV 381
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A C G+ GADL +LC+EAA++ REK + D
Sbjct: 382 GRLEILRIHTKNMKLADDVDLE-QIANECHGFVGADLASLCSEAALQQIREKMELIDLED 440
Query: 616 DKF---LIDVDSVTVEKYHFIEAMSTITPAAHRGATVHS 651
D+ +++ +VT+E + F + S +P+A R A V +
Sbjct: 441 DQIDAEVLNSLAVTMENFRFAQGKS--SPSALREAVVET 477
Score = 156 bits (395), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 138/239 (57%), Gaps = 16/239 (6%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+ ++ DIGGL L+E+V +P+ +P+ + + + P RGVL GPPG GKTL+A+A+A
Sbjct: 479 NTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 538
Query: 435 --CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGL--- 489
C A +F KG ++L+ W GE+E ++ +F++A+ P ++FFDE+D +
Sbjct: 539 NECQA-------NFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKA 591
Query: 490 -APVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFN 548
+ +++ +L MDG++++ V +IGATNR D ID A+ RPGR D+
Sbjct: 592 RGGGAGGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIY 651
Query: 549 FPLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFRE 606
PLP +R +IL RK P S++L + LA + VG+ GADL +C A A RE
Sbjct: 652 IPLPDEASRHQILKASLRKT--PLSKDLDLTFLAKNTVGFSGADLTEICQRACKLAIRE 708
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 232 bits (592), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 134/317 (42%), Positives = 189/317 (59%), Gaps = 13/317 (4%)
Query: 374 ESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARAL 433
+ V +DD+GG+ + + ++E+V PL +P F S + PP+G+LL GPPG+GKTLIARA+
Sbjct: 203 DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 262
Query: 434 ACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
A ++ G F+ G +++SK GE+E L+ FEEA++N PSIIF DEID +AP R
Sbjct: 263 A---NETG--AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
Query: 494 SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
++ IVS LL LMDGL SR V++IGATNR ++ID ALRR GRFDRE + +P
Sbjct: 318 EKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGVPD 377
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
R E+L IHT+ K +L+ +A GY GADL ALCTEAA++ REK +
Sbjct: 378 EVGRLEVLRIHTKNMKLSDDVDLE-RIAKDTHGYVGADLAALCTEAALQCIREKMDVIDL 436
Query: 614 SDDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLS---LVVAPCLQRHLQKA 669
D+ +V +S+ V HF A+ T P+A R V +S + ++R LQ+
Sbjct: 437 EDETIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQET 496
Query: 670 MNYI---SDIFPPLGMS 683
+ Y + F GMS
Sbjct: 497 VQYPVEHPEKFEKFGMS 513
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 167/307 (54%), Gaps = 23/307 (7%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
+++A QTA +S A + + +VS++DIGGL L+E V +P+ +P+
Sbjct: 447 NSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEK 506
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALA--CAASKAGQKVSFYMRKGADVLSKWVGEA 462
F + ++P +GVL GPPG GKTL+A+A+A C A +F KG ++L+ W GE+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA-------NFISVKGPELLTMWFGES 559
Query: 463 ERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQ---IHNSIVSTLLALMDGLDSRG 519
E ++ +F++A+++ P ++FFDE+D +A R S + +++ LL MDG+ ++
Sbjct: 560 EANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGGAADRVLNQLLTEMDGMSAKK 619
Query: 520 QVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSE 579
V +IGATNR D ID AL RPGR D+ PLP ++R +I RK + +L++
Sbjct: 620 TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPIAKNVDLRA- 678
Query: 580 LAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD----------DKFLIDVDSVTVEK 629
LA G+ GAD+ +C A A RE + + D+ +D + ++
Sbjct: 679 LARHTQGFSGADITEICQRACKYAIRENIEKDIERERKSRENPEAMDEDTVDDEVAEIKA 738
Query: 630 YHFIEAM 636
HF E+M
Sbjct: 739 AHFEESM 745
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 232 bits (591), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 121/279 (43%), Positives = 172/279 (61%), Gaps = 9/279 (3%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
+S++DIGGLSE + ++EM+ PL +P+ F ITPP+GV+L GPPGTGKTLIARA+A
Sbjct: 187 ISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARAVAN 246
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
+ +F G +++SK+ G++E++L+ +F +A+ PSIIF DEID +AP R
Sbjct: 247 ESG-----ANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKREE 301
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
Q ++ +V+ LL LMDG+ RG V++IGATNR+DAID ALRRPGRFDRE +P
Sbjct: 302 VQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGVPDRN 361
Query: 556 ARAEILDIHTRKWKQPPSRELKS----ELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
R EIL IHTR S E K+ E+A G+ GADL AL E+A+ A R P++
Sbjct: 362 GRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEI 421
Query: 612 YTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVH 650
++ + V + F A+ +I P++ R V
Sbjct: 422 DLDKPIPTEILEKMVVTEDDFKNALKSIEPSSLREVMVE 460
Score = 206 bits (524), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/282 (40%), Positives = 166/282 (58%), Gaps = 21/282 (7%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V +DDIGGL + +KE V PLL PD F I P +G LL GPPG GKTL+A+A+A
Sbjct: 463 NVHWDDIGGLEDVKREIKETVELPLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVA 522
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
++ +F KG +VLSKWVGE+E+ ++ +F++A++ P+I+F DEID +AP R
Sbjct: 523 TESN-----ANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVFLDEIDSIAPRRG 577
Query: 495 SKQEQ-IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
+ + + IV+ LL +DG++ VV+IGATNR D +D AL R GRFD+ P P
Sbjct: 578 TTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPPPD 637
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
EAR IL +HT+ P +L +++A GY GADL+ LC EA + A+RE
Sbjct: 638 KEARLSILKVHTKNMPLAPDVDL-NDIAQRTEGYVGADLENLCREAGMNAYRE------- 689
Query: 614 SDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATVHSRPLS 655
+ D+ +V + +F++A+ TI P+ R LS
Sbjct: 690 -------NPDATSVSQKNFLDALKTIRPSVDEEVIKFYRTLS 724
>sp|Q9HPF0|CDCH_HALSA Protein CdcH OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=cdcH PE=3 SV=1
Length = 742
Score = 232 bits (591), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 122/277 (44%), Positives = 176/277 (63%), Gaps = 9/277 (3%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
++++DIGGL I ++EMV P+ +P F I PP+GVLL GPPGTGKTL+A+A+A
Sbjct: 186 ITYEDIGGLENEIQRVREMVELPMKHPQIFQKLGIEPPQGVLLHGPPGTGKTLLAKAVAN 245
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
S SF+ G +++SK+ GE+E+QL+ +FE+A+ + PSIIF DE+D +AP R
Sbjct: 246 ETS-----ASFFSIAGPEIISKYYGESEQQLREIFEDAKDDSPSIIFIDELDSIAPKRED 300
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +V+ LL +MDGL+ RGQV++I ATNRVDA+D ALRRPGRFDRE +P
Sbjct: 301 VTGEVERRVVAQLLTMMDGLEGRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDEI 360
Query: 556 ARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTS 614
R EIL IHTR P S ++ S LA G+ GAD+++L EAA+RA R P++
Sbjct: 361 GREEILKIHTRGM--PLSDDVNLSTLADDTHGFVGADIESLSKEAAMRALRRYLPEIDLD 418
Query: 615 DDKFLID-VDSVTVEKYHFIEAMSTITPAAHRGATVH 650
++ +D + V++ F A+S + P+A R V
Sbjct: 419 EEDIPPSLIDRMIVKREDFKGALSEVEPSAMREVLVE 455
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/267 (40%), Positives = 153/267 (57%), Gaps = 21/267 (7%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
+++DD+GGL+E + +KE V +PL P+ F + PP GVLL GPPGTGKTL+A+A+A
Sbjct: 459 ITWDDVGGLTEAKNNVKESVEWPLNQPEKFTRMGVEPPAGVLLYGPPGTGKTLMAKAVAN 518
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR-S 494
+ +F +G +LSKWVGE+E+ ++ F +A++ P++IFFDE+D LAP R
Sbjct: 519 ETN-----ANFISVRGPQLLSKWVGESEKAIRQTFRKARQVAPTVIFFDELDSLAPGRGQ 573
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
+ + +V+ LL +DGL+ +V++I ATNR D ID AL R GRFDR PG
Sbjct: 574 TGGNNVSERVVNQLLTELDGLEEMEEVMVIAATNRPDIIDPALIRSGRFDRLVQVGQPGI 633
Query: 555 EARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTS 614
E R +IL IHT+ L+ ELA GY G+DL + EAAI A R+
Sbjct: 634 EGREQILKIHTQDTPLAADVSLR-ELAERADGYVGSDLANIAREAAIEALRD-------- 684
Query: 615 DDKFLIDVDSVTVEKYHFIEAMSTITP 641
D D+ V HF AM + P
Sbjct: 685 ------DEDADDVGMAHFRAAMENVRP 705
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 231 bits (588), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 189/317 (59%), Gaps = 13/317 (4%)
Query: 374 ESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARAL 433
+ V +DD+GG+ + + ++E+V PL +P F S + PP+G+LL GPPG+GKTLIARA+
Sbjct: 203 DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 262
Query: 434 ACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
A ++ G F+ G +++SK GE+E L+ FEEA++N PSIIF DEID +AP R
Sbjct: 263 A---NETG--AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
Query: 494 SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
++ IVS LL LMDGL SR V+++GATNR ++ID ALRR GRFDRE + +P
Sbjct: 318 EKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 377
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
R E+L IHT+ K +L+ ++ GY GADL ALCTEAA++ REK +
Sbjct: 378 EVGRLEVLGIHTKNMKLAEEVDLE-RISKDTHGYVGADLAALCTEAALQCIREKMDVLDL 436
Query: 614 SDDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLS---LVVAPCLQRHLQKA 669
DD +V +S+ V HF A+ T P+A R V +S + ++R LQ+
Sbjct: 437 EDDTIDAEVLNSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQET 496
Query: 670 MNY---ISDIFPPLGMS 683
+ Y + F GMS
Sbjct: 497 VQYPVEPPEKFEKFGMS 513
Score = 164 bits (414), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 166/305 (54%), Gaps = 21/305 (6%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
+++A QTA +S A + + +VS++DIGGL L+E V +P+ P+
Sbjct: 447 NSMAVTNEHFQTALGTSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEPPEK 506
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALA--CAASKAGQKVSFYMRKGADVLSKWVGEA 462
F + ++P +GVL GPPG GKTL+A+A+A C A +F KG ++L+ W GE+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA-------NFISVKGPELLTMWFGES 559
Query: 463 ERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQ---IHNSIVSTLLALMDGLDSRG 519
E ++ +F++A+++ P ++FFDE+D +A R S + +++ LL MDG++++
Sbjct: 560 EANVREIFDKARQSAPCVLFFDELDSIATQRGSSSGDAGGAADRVLNQLLTEMDGMNAKK 619
Query: 520 QVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSE 579
V +IGATNR D ID AL RPGR D+ PLP ++R +I RK +L++
Sbjct: 620 TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRHQIFKACLRKSPLSKDIDLRA- 678
Query: 580 LAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD-------DKFLIDVDSV-TVEKYH 631
LA G+ GAD+ +C A A RE + + D DVD V ++ H
Sbjct: 679 LAKHTQGFSGADVTEICQRACKYAIRENIEKDIEREKRRQENPDSMDEDVDEVPEIKPAH 738
Query: 632 FIEAM 636
F E+M
Sbjct: 739 FEESM 743
>sp|P25694|CDC48_YEAST Cell division control protein 48 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDC48 PE=1 SV=3
Length = 835
Score = 229 bits (584), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 122/279 (43%), Positives = 172/279 (61%), Gaps = 11/279 (3%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + ++EMV PL +P F + I PPRGVL+ GPPGTGKTL+ARA+A
Sbjct: 211 VGYDDIGGCRKQMAQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVAN 270
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
F++ G +V+SK GE+E L+ FEEA++N P+IIF DEID +AP R
Sbjct: 271 ETG-----AFFFLINGPEVMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKRDK 325
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +VS LL LMDG+ +R VV+I ATNR ++ID ALRR GRFDRE + +P
Sbjct: 326 TNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGIPDAT 385
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R E+L IHT+ K +L++ LAA GY GAD+ +LC+EAA++ REK + +
Sbjct: 386 GRLEVLRIHTKNMKLADDVDLEA-LAAETHGYVGADIASLCSEAAMQQIREKMDLIDLDE 444
Query: 616 DKF---LIDVDSVTVEKYHFIEAMSTITPAAHRGATVHS 651
D+ ++D VT++ + F A+ P+A R V S
Sbjct: 445 DEIDAEVLDSLGVTMDNFRF--ALGNSNPSALRETVVES 481
Score = 177 bits (448), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 159/288 (55%), Gaps = 30/288 (10%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V++DD+GGL E + LKE V +P+L+PD + + ++P +GVL GPPGTGKTL+A+A+A
Sbjct: 483 NVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVA 542
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
S +F KG ++LS W GE+E ++ +F++A+ P+++F DE+D +A R
Sbjct: 543 TEVS-----ANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARG 597
Query: 495 SKQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
+ +V+ LL MDG++++ V +IGATNR D ID A+ RPGR D+ PL
Sbjct: 598 GSLGDAGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPL 657
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFR------ 605
P AR IL+ RK P EL + +A + G+ GADL + AA A +
Sbjct: 658 PDENARLSILNAQLRKTPLEPGLELTA-IAKATQGFSGADLLYIVQRAAKYAIKDSIEAH 716
Query: 606 -----EKYPQVYTSDDKFLI---------DVDSVT-VEKYHFIEAMST 638
EK +V D + +VD V + K HF EAM T
Sbjct: 717 RQHEAEKEVKVEGEDVEMTDEGAKAEQEPEVDPVPYITKEHFAEAMKT 764
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 188/317 (59%), Gaps = 13/317 (4%)
Query: 374 ESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARAL 433
+ V +DD+GG+ + + ++E+V PL +P F S + PP+G+LL GPPG+GKTLIARA+
Sbjct: 202 DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 261
Query: 434 ACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
A ++ G F+ G +++SK GE+E L+ FEEA++N PSIIF DEID +AP R
Sbjct: 262 A---NETG--AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 316
Query: 494 SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
++ IVS LL LMDGL SR V+++GATNR ++ID ALRR GRFDRE + +P
Sbjct: 317 EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 376
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
R E+L IHT+ K +L+ ++ GY GADL ALCTEAA++ REK +
Sbjct: 377 EIGRLEVLRIHTKNMKLAEDVDLE-RISKDTHGYVGADLAALCTEAALQCIREKMDVIDL 435
Query: 614 SDDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLS---LVVAPCLQRHLQKA 669
DD ++ +S+ V HF A+ P+A R V +S + ++R LQ+
Sbjct: 436 EDDSIDAEILNSMAVSNEHFHTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQET 495
Query: 670 MNYI---SDIFPPLGMS 683
+ Y + F GMS
Sbjct: 496 VQYPVEHPEKFEKFGMS 512
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 96/281 (34%), Positives = 156/281 (55%), Gaps = 31/281 (11%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+VS++DIGGL L+E V +P+ +P+ F + ++P +GVL GPPG GKTL+A+A+A
Sbjct: 476 NVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIA 535
Query: 435 --CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPV 492
C A +F KG ++L+ W GE+E ++ +F++A+++ P ++FFDE+D +A
Sbjct: 536 NECQA-------NFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQ 588
Query: 493 RSSKQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNF 549
R + + +++ LL MDG++++ V +IGATNR D ID AL RPGR D+
Sbjct: 589 RGNSAGDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYI 648
Query: 550 PLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFRE-- 606
PLP ++R I R K P ++++ + LA G+ GAD+ +C A A RE
Sbjct: 649 PLPDEDSRLNIFKACLR--KSPVAKDVDVTALAKYTQGFSGADITEICQRACKYAIRENI 706
Query: 607 -----------KYPQVYTSDDKFLIDVDSVTVEKYHFIEAM 636
+ P+ D ++D + + HF E+M
Sbjct: 707 EKDIENERRRSQNPEAMEED---MVDDEVSEIRAAHFEESM 744
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 228 bits (582), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 131/317 (41%), Positives = 188/317 (59%), Gaps = 13/317 (4%)
Query: 374 ESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARAL 433
+ V +DD+GG+ + + ++E+V PL +P F S + PP+G+LL GPPG+GKTLIARA+
Sbjct: 202 DDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 261
Query: 434 ACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
A ++ G F+ G +++SK GE+E L+ FEEA++N PSIIF DEID +AP R
Sbjct: 262 A---NETG--AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 316
Query: 494 SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
++ IVS LL LMDGL SR V+++GATNR ++ID ALRR GRFDRE + +P
Sbjct: 317 EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 376
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
R E+L IHT+ K +L+ ++ GY GADL ALCTEAA++ REK +
Sbjct: 377 EIGRLEVLRIHTKNMKLAEDVDLE-RISKDTHGYVGADLAALCTEAALQCIREKMDVIDL 435
Query: 614 SDDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLS---LVVAPCLQRHLQKA 669
DD ++ +S+ V HF A+ P+A R V +S + ++R LQ+
Sbjct: 436 EDDSIDAEILNSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQET 495
Query: 670 MNYI---SDIFPPLGMS 683
+ Y + F GMS
Sbjct: 496 VQYPVEHPEKFEKFGMS 512
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 150/269 (55%), Gaps = 16/269 (5%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
+++A TA +S A + + +VS++DIGGL L+E V +P+ +P+
Sbjct: 446 NSMAVTNEHFHTALGNSNPSALRETVVEVPNVSWNDIGGLENVKRELQETVQYPVEHPEK 505
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALA--CAASKAGQKVSFYMRKGADVLSKWVGEA 462
F + ++P +GVL GPPG GKTL+A+A+A C A +F KG ++L+ W GE+
Sbjct: 506 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA-------NFISVKGPELLTMWFGES 558
Query: 463 ERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQIHNS----IVSTLLALMDGLDSR 518
E ++ +F++A+++ P ++FFDE+D +A R +++ LL MDG++++
Sbjct: 559 EANVREIFDKARQSAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGMNAK 618
Query: 519 GQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK- 577
V +IGATNR D ID AL RPGR D+ PLP ++R I R K P ++++
Sbjct: 619 KTVFIIGATNRPDIIDSALLRPGRLDQLIYIPLPDEDSRLNIFKAALR--KSPIAKDVDI 676
Query: 578 SELAASCVGYCGADLKALCTEAAIRAFRE 606
LA G+ GAD+ +C A A RE
Sbjct: 677 GALAKYTQGFSGADITEICQRACKYAIRE 705
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 226 bits (576), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 130/317 (41%), Positives = 189/317 (59%), Gaps = 13/317 (4%)
Query: 374 ESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARAL 433
+ V +DD+GG+ + + ++E+V PL +P F S + PP+G+LL GPPG+GKTLIARA+
Sbjct: 203 DEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTLIARAV 262
Query: 434 ACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
A ++ G F+ G +++SK GE+E L+ FEEA++N PSIIF DEID +AP R
Sbjct: 263 A---NETG--AFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
Query: 494 SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
++ IVS LL LMDGL SR V+++GATNR ++ID ALRR GRFDRE + +P
Sbjct: 318 EKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGVPD 377
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
R E+L IHT+ K +L+ ++ GY GADL ALCTEAA++ REK +
Sbjct: 378 EIGRLEVLRIHTKNMKLAEDVDLE-RVSKDTHGYVGADLAALCTEAALQCIREKMDVIDL 436
Query: 614 SDDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRPLS---LVVAPCLQRHLQKA 669
D++ ++ +S+ V HF A+ P+A R V +S + ++R LQ+
Sbjct: 437 DDEEIDAEILNSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQET 496
Query: 670 MNYI---SDIFPPLGMS 683
+ Y + F GMS
Sbjct: 497 VQYPVEHPEKFEKFGMS 513
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 95/267 (35%), Positives = 153/267 (57%), Gaps = 13/267 (4%)
Query: 345 DTLAALTSGIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDF 404
+++A QTA +S A + + +VS++DIGGL L+E V +P+ +P+
Sbjct: 447 NSMAVSNDHFQTALGNSNPSALRETVVEVPNVSWEDIGGLENVKRELQETVQYPVEHPEK 506
Query: 405 FASYHITPPRGVLLCGPPGTGKTLIARALA--CAASKAGQKVSFYMRKGADVLSKWVGEA 462
F + ++P +GVL GPPG GKTL+A+A+A C A +F KG ++L+ W GE+
Sbjct: 507 FEKFGMSPSKGVLFYGPPGCGKTLLAKAIANECQA-------NFISIKGPELLTMWFGES 559
Query: 463 ERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSKQEQ---IHNSIVSTLLALMDGLDSRG 519
E ++ +F++A+++ P ++FFDE+D +A R + + +++ LL MDG++++
Sbjct: 560 EANVREIFDKARQSAPCVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMDGMNAKK 619
Query: 520 QVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSE 579
V +IGATNR D ID AL RPGR D+ PLP E+R +I RK +L++
Sbjct: 620 TVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEESRYQIFKSCLRKSPVAKDVDLRA- 678
Query: 580 LAASCVGYCGADLKALCTEAAIRAFRE 606
LA G+ GAD+ +C + A RE
Sbjct: 679 LAKYTQGFSGADITEICQRSCKYAIRE 705
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/277 (43%), Positives = 173/277 (62%), Gaps = 7/277 (2%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V +DDIGG + + +KEMV PL +P F + + PPRG+L+ GPPGTGKTLIARA+A
Sbjct: 197 AVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIARAVA 256
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DEID +AP R
Sbjct: 257 ---NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKRD 311
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
++ IVS LL LMDG+ ++++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 312 KTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGIPDA 371
Query: 555 EARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTS 614
R E+L IHT+ K +L+ ++AA G+ GADL +LC+EAA++ REK +
Sbjct: 372 TGRLEVLRIHTKNMKLHDDVDLE-QIAAESHGHVGADLASLCSEAALQQIREKMDLIDLE 430
Query: 615 DDKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVH 650
DDK +V S+ V +F AM+ +P+A R V
Sbjct: 431 DDKIDAEVLASLAVTMENFRYAMTKSSPSALRETVVE 467
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 88/238 (36%), Positives = 138/238 (57%), Gaps = 15/238 (6%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+ ++ DIGGL L+E+V +P+ +PD F + + P RGVL GPPG GKTL+A+A+A
Sbjct: 470 NTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKAIA 529
Query: 435 --CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPV 492
C A +F KG ++L+ W GE+E ++ +F++A+ P ++FFDE+D +A
Sbjct: 530 NECQA-------NFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKA 582
Query: 493 RSSKQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNF 549
R + +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+
Sbjct: 583 RGGNVGDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 642
Query: 550 PLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFRE 606
PLP ++R IL + R K P ++E+ + +A G+ GADL +C A A R+
Sbjct: 643 PLPDDKSREAILKANLR--KSPLAKEVDLTYIAKVTQGFSGADLTEICQRACKLAIRQ 698
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 224 bits (571), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 120/279 (43%), Positives = 170/279 (60%), Gaps = 7/279 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + ++E+V PL +P F S I PPRG+L+ GPPGTGKTL+ARA+A
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
F++ G +++SK GE+E L+ FEEA++N P+IIF DEID +AP R
Sbjct: 282 ETG-----AFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK 336
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +VS LL LMDG+ +R VV++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 337 TNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGIPDPT 396
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L++ +AA GY G+DL +LC+EAA++ REK + +
Sbjct: 397 GRLEILSIHTKNMKLGEDVDLET-IAAETHGYVGSDLASLCSEAAMQQIREKMDLIDLDE 455
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHSRP 653
D +V DS+ V +F A+ P+A R V P
Sbjct: 456 DTIDAEVLDSLGVTMENFRYALGVSNPSALREVAVVEVP 494
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 135/238 (56%), Gaps = 15/238 (6%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V ++DIGGL E L E V +P+ +P+ F + ++P RGVL GPPGTGKT++A+A+A
Sbjct: 495 NVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKAVA 554
Query: 435 --CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPV 492
CAA +F KG ++LS W GE+E ++ +F++A+ P ++F DE+D +A
Sbjct: 555 NECAA-------NFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKS 607
Query: 493 RSSKQEQ---IHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNF 549
R + +V+ LL MDG+ S+ V +IGATNR + +D AL RPGR D
Sbjct: 608 RGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYV 667
Query: 550 PLPGCEARAEILDIHTRKWKQPPSRELKSELAASCV-GYCGADLKALCTEAAIRAFRE 606
PLP +R IL R K P + ++ E AS G+ GADL + A A +E
Sbjct: 668 PLPDQASREGILKAQLR--KTPVASDVDIEFIASKTHGFSGADLGFVTQRAVKLAIKE 723
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 172/276 (62%), Gaps = 7/276 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG+ + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVH 650
+ +V +S+ V F A+S P+A R V
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 143/238 (60%), Gaps = 15/238 (6%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+++++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 473 NITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIA 532
Query: 435 --CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPV 492
C A +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A
Sbjct: 533 NECQA-------NFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKA 585
Query: 493 RSSKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNF 549
R + +++ +L MDG+ S+ V +IGATNR D ID A+ RPGR D+
Sbjct: 586 RGGNVGDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYI 645
Query: 550 PLPGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAAIRAFRE 606
PLP ++R IL + R K P S+++ + LA G+ GADL +C A A RE
Sbjct: 646 PLPDEKSRIAILKANLR--KSPISKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 701
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 223 bits (568), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 118/278 (42%), Positives = 171/278 (61%), Gaps = 11/278 (3%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + ++E+V PL +P F S I PPRG+L+ GPPGTGKTL+ARA+A
Sbjct: 221 VGYDDIGGCRRQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 280
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
F++ G +++SK GE+E L+ FEEA++N P+IIF DEID +AP R
Sbjct: 281 ETG-----AFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKREK 335
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +VS LL LMDG+ +R VV++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 336 TNGEVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGIPDPT 395
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++AA GY G+DL +LC+EAA++ REK + +
Sbjct: 396 GRLEILRIHTKNMKLADDVDLE-QIAAETHGYVGSDLASLCSEAAMQQIREKMDMIDLDE 454
Query: 616 DKF---LIDVDSVTVEKYHFIEAMSTITPAAHRGATVH 650
D+ ++D VT++ + F A+ + P+A R V
Sbjct: 455 DEIDAEVLDSLGVTMDNFRF--ALGSSNPSALRETVVE 490
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/276 (36%), Positives = 154/276 (55%), Gaps = 22/276 (7%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V ++DIGGL E L+E V P++Y + F + +TP +GVL GPPGTGKTL+A+A+A
Sbjct: 493 NVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKAIA 552
Query: 435 --CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPV 492
C+A +F KG ++LS W GE+E ++ +F++A+ P ++F DE+D +A
Sbjct: 553 NECSA-------NFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKA 605
Query: 493 RSSKQEQIHNS--IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
R + +V+ LL MDG++S+ V +IGATNR D ID AL RPGR D+ P
Sbjct: 606 RGASAGDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVP 665
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQ 610
LP EAR IL R +L++ +A + G+ GADL+ + A A ++ +
Sbjct: 666 LPDEEARFSILQTQLRHTPVAEDVDLRA-VAKATHGFSGADLEFVVQRAVKLAIKDSIEE 724
Query: 611 VYTSD--------DKFLIDVDSVT--VEKYHFIEAM 636
+ D ++D D+ V+++H EAM
Sbjct: 725 DIKRENETGEAPADDVVMDEDASVSQVQRHHVEEAM 760
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 222 bits (566), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 171/276 (61%), Gaps = 7/276 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDST 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLSDDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVH 650
+ +V +S+ V F A+S P+A R V
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 141/237 (59%), Gaps = 15/237 (6%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA- 434
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 435 -CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
C A +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 ECQA-------NFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 494 SSKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
+ +++ +L MDG+ + V +IGATNR D ID A+ RPGR D+ P
Sbjct: 587 GGNIGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP 646
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAAIRAFRE 606
LP ++R IL + R K P ++++ + LA G+ GADL +C A A RE
Sbjct: 647 LPDEKSRMAILKANLR--KSPVAKDVDVDFLAKMTNGFSGADLTEICQRACKLAIRE 701
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 171/276 (61%), Gaps = 7/276 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVH 650
+ +V +S+ V F A+S P+A R V
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 139/231 (60%), Gaps = 15/231 (6%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA- 434
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 435 -CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
C A +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 ECQA-------NFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 494 SSKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ P
Sbjct: 587 GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP 646
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAA 600
LP ++R IL + R K P ++++ E LA G+ GADL +C A
Sbjct: 647 LPDEKSRVAILKANLR--KSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 171/276 (61%), Gaps = 7/276 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVH 650
+ +V +S+ V F A+S P+A R V
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 139/231 (60%), Gaps = 15/231 (6%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA- 434
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 435 -CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
C A +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 ECQA-------NFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 494 SSKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ P
Sbjct: 587 GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP 646
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAA 600
LP ++R IL + R K P ++++ E LA G+ GADL +C A
Sbjct: 647 LPDEKSRVAILKANLR--KSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 222 bits (565), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 171/276 (61%), Gaps = 7/276 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVH 650
+ +V +S+ V F A+S P+A R V
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 139/231 (60%), Gaps = 15/231 (6%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA- 434
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 435 -CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
C A +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 ECQA-------NFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 494 SSKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ P
Sbjct: 587 GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP 646
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAA 600
LP ++R IL + R K P ++++ E LA G+ GADL +C A
Sbjct: 647 LPDEKSRVAILKANLR--KSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 171/276 (61%), Gaps = 7/276 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVH 650
+ +V +S+ V F A+S P+A R V
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Score = 163 bits (412), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/231 (38%), Positives = 139/231 (60%), Gaps = 15/231 (6%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA- 434
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 435 -CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
C A +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 ECQA-------NFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 494 SSKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ P
Sbjct: 587 GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP 646
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAA 600
LP ++R IL + R K P ++++ E LA G+ GADL +C A
Sbjct: 647 LPDEKSRVAILKANLR--KSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 222 bits (565), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 171/276 (61%), Gaps = 7/276 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDAT 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLADDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVH 650
+ +V +S+ V F A+S P+A R V
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 139/231 (60%), Gaps = 15/231 (6%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA- 434
V+++DIGGL + L+++V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 435 -CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
C A +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 ECQA-------NFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 494 SSKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ P
Sbjct: 587 GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP 646
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAA 600
LP ++R IL + R K P ++++ E LA G+ GADL +C A
Sbjct: 647 LPDEKSRVAILKANLR--KSPVAKDVDLEFLAKMTNGFSGADLTEICQRAC 695
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 221 bits (564), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 122/276 (44%), Positives = 171/276 (61%), Gaps = 7/276 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DDIGG + + +KEMV PL +P F + + PPRG+LL GPPGTGKTLIARA+A
Sbjct: 201 VGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIARAVA- 259
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G F++ G +++SK GE+E L+ FEEA++N P+IIF DE+D +AP R
Sbjct: 260 --NETG--AFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKREK 315
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ IVS LL LMDGL R V+++ ATNR ++ID ALRR GRFDRE + +P
Sbjct: 316 THGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGIPDST 375
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L+ ++A G+ GADL ALC+EAA++A R+K + D
Sbjct: 376 GRLEILQIHTKNMKLSDDVDLE-QVANETHGHVGADLAALCSEAALQAIRKKMDLIDLED 434
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVH 650
+ +V +S+ V F A+S P+A R V
Sbjct: 435 ETIDAEVMNSLAVTMDDFRWALSQSNPSALRETVVE 470
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/237 (37%), Positives = 142/237 (59%), Gaps = 15/237 (6%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA- 434
V+++DIGGL + L+E+V +P+ +PD F + +TP +GVL GPPG GKTL+A+A+A
Sbjct: 474 VTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKAIAN 533
Query: 435 -CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
C A +F KG ++L+ W GE+E ++ +F++A++ P ++FFDE+D +A R
Sbjct: 534 ECQA-------NFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKAR 586
Query: 494 SSKQEQIHNS---IVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFP 550
+ +++ +L MDG+ ++ V +IGATNR D ID A+ RPGR D+ P
Sbjct: 587 GGNIGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIP 646
Query: 551 LPGCEARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAAIRAFRE 606
LP ++R IL + R K P ++++ + LA G+ GADL +C A A RE
Sbjct: 647 LPDEKSRIAILKANLR--KSPVAKDVDLDFLAKMTNGFSGADLTEICQRACKLAIRE 701
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/277 (41%), Positives = 168/277 (60%), Gaps = 7/277 (2%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V +DD+GG + ++E+V PL + ++ + PP+G+LL GPPGTGKTLIARA+A
Sbjct: 205 VGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTLIARAIA- 263
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G ++ G +++SK GE+E L+ FEEA++N P+IIF DEID LAP R
Sbjct: 264 --NETG--AFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKREK 319
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
Q ++ IVS LL LMDG+ +R V+++GATNR ++ID ALRR GRFDRE +P
Sbjct: 320 SQGEVERRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEIGVPDET 379
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R EIL IHT+ K +L + + G+ G+DL +LC+EAA++ REK PQ+
Sbjct: 380 GRLEILRIHTKNMKMSEDVDLVA-INKELHGFTGSDLASLCSEAALQQIREKLPQIDLDS 438
Query: 616 DKFLIDV-DSVTVEKYHFIEAMSTITPAAHRGATVHS 651
+K V S+ V +F A+ P++ R + S
Sbjct: 439 EKIDAKVLASLKVNSENFRYAIEHTDPSSLRETVIQS 475
Score = 173 bits (438), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 100/256 (39%), Positives = 144/256 (56%), Gaps = 12/256 (4%)
Query: 353 GIQTAGPSSKGGADIQPLQVDESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITP 412
I+ PSS IQ +V + DIGGL + L+E V +P+ YP+ F + +TP
Sbjct: 459 AIEHTDPSSLRETVIQ----SPNVKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFGMTP 514
Query: 413 PRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEE 472
+GVL GPPG GKTL+A+A+A K +F KG ++LS WVGE+E ++ LF
Sbjct: 515 AKGVLFYGPPGCGKTLLAKAVATEC-----KANFISIKGPELLSMWVGESESNIRDLFAR 569
Query: 473 AQRNQPSIIFFDEIDGLAPVRSSK--QEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRV 530
A+ P ++FFDEID +A RS + +++ LL+ MDG++ + V +IGATNR
Sbjct: 570 ARGAAPCVLFFDEIDSIAKARSGNDGSSGATDRMLNQLLSEMDGINQKKNVFVIGATNRP 629
Query: 531 DAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGA 590
D +D AL RPGR D+ PLP ++R IL +K P +L+ +LA + + GA
Sbjct: 630 DQLDSALMRPGRLDQLVYIPLPDLDSRVSILQATLKKTPLSPEIDLR-QLAEATDKFSGA 688
Query: 591 DLKALCTEAAIRAFRE 606
DL +C A A RE
Sbjct: 689 DLSEICQRACKLAIRE 704
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 214 bits (545), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 119/283 (42%), Positives = 166/283 (58%), Gaps = 19/283 (6%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
VS++DIG L E ++E+V +P+ +P+ F I PP+G+LL GPPGTGKTL+ARALA
Sbjct: 209 VSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARALAN 268
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
F G +++SK+ GE+E++++ +F+EA+ N PSIIF DEID +AP R
Sbjct: 269 EIG-----AYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKRED 323
Query: 496 KQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGCE 555
++ +V+ LL LMDG+ RG+V++IGATNR DAID ALRRPGRFDRE P +
Sbjct: 324 VTGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEIRPPDTK 383
Query: 556 ARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
R +IL +HTR +L +LA GY GADL AL EAAI A R + +
Sbjct: 384 GRKDILQVHTRNMPITDDVDL-DKLAEMTYGYTGADLAALAKEAAIYALRR-----FVDE 437
Query: 616 DKFLID--------VDSVTVEKYHFIEAMSTITPAAHRGATVH 650
K +D + + V F+ A+ +I P+ R V
Sbjct: 438 KKLNLDQPTIPAEIIKELKVSMNDFLNALKSIQPSLLREVYVE 480
Score = 200 bits (509), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/235 (45%), Positives = 150/235 (63%), Gaps = 9/235 (3%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V+++DIGGL L+E V +PL +P+ F +TPP+G+LL GPPGTGKT++A+A+A
Sbjct: 484 VNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGILLFGPPGTGKTMLAKAVAT 543
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS- 494
+ +F +G ++LSKWVGE+E+ ++ +F +A++ P++IFFDEID +AP+R
Sbjct: 544 ESG-----ANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIFFDEIDSIAPIRGL 598
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
S + IV+ LLA MDG+ +VV+I ATNR D +D AL RPGRFDR P P
Sbjct: 599 STDSGVTERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRPGRFDRLIYVPPPDK 658
Query: 555 EARAEILDIHTRKWKQPPSRELKSE-LAASCVGYCGADLKALCTEAAIRAFREKY 608
AR EIL +HT+ P + ++ E +A GY GADL+AL EA I A R Y
Sbjct: 659 TARFEILKVHTKNV--PLAEDVSLEDIAEKAEGYTGADLEALVREATINAMRSIY 711
>sp|Q8NB90|SPAT5_HUMAN Spermatogenesis-associated protein 5 OS=Homo sapiens GN=SPATA5 PE=1
SV=3
Length = 893
Score = 211 bits (537), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 118/273 (43%), Positives = 166/273 (60%), Gaps = 10/273 (3%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++D IGGLS + A++E++ PL P+ F SY I PRGVLL GPPGTGKT+IARA+
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAV-- 407
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
A++ G VS G +++SK+ GE E +L+ +F EA PSIIF DE+D L P R
Sbjct: 408 -ANEVGAYVSVI--NGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKREG 464
Query: 496 KQEQIHNSIVSTLLALMDGLD---SRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
Q ++ +V++LL LMDG+ S GQV+++GATNR A+D ALRRPGRFD+E +P
Sbjct: 465 AQNEVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVP 524
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+ R +IL R+ + +LA S GY GADLK LC EA + A R +
Sbjct: 525 NAQDRLDILQKLLRRVPHLLTEAELLQLANSAHGYVGADLKVLCNEAGLCALRRILKKQP 584
Query: 613 TSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHR 645
D + + +T++ F++AM+ I P+A R
Sbjct: 585 NLPDVKVAGLVKITLK--DFLQAMNDIRPSAMR 615
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/285 (38%), Positives = 160/285 (56%), Gaps = 30/285 (10%)
Query: 366 DIQPLQVDE------SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLC 419
DI+P + E +VS+ DIGGL L++ V +PL +P+ F I PP+GVLL
Sbjct: 608 DIRPSAMREIAIDVPNVSWSDIGGLESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLY 667
Query: 420 GPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPS 479
GPPG KT+IA+AL A+++G ++F KG ++++K+VGE+ER ++ F +A+ PS
Sbjct: 668 GPPGCSKTMIAKAL---ANESG--LNFLAIKGPELMNKYVGESERAVRETFRKARAVAPS 722
Query: 480 IIFFDEIDGLAPVRSSK--QEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGAL 537
IIFFDE+D LA R S + + +++ LL MDG++ V ++ ATNR D ID AL
Sbjct: 723 IIFFDELDALAVERGSSLGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRIDKAL 782
Query: 538 RRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALC 596
RPGR DR PLP R EI + P S E+ EL Y GA++ A+C
Sbjct: 783 MRPGRIDRIIYVPLPDAATRREIFKLQFHSM--PVSNEVDLDELILQTDAYSGAEIVAVC 840
Query: 597 TEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITP 641
EAA+ A E D+ + + K HF +A+ST+TP
Sbjct: 841 REAALLALEE--------------DIQANLIMKRHFTQALSTVTP 871
>sp|Q3UMC0|SPAT5_MOUSE Spermatogenesis-associated protein 5 OS=Mus musculus GN=Spata5 PE=2
SV=2
Length = 893
Score = 207 bits (526), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 114/277 (41%), Positives = 166/277 (59%), Gaps = 10/277 (3%)
Query: 376 VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALAC 435
V++D IGGL+ + A++E++ PL P+ F SY I PRG+LL GPPGTGKT+IARA+A
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVA- 408
Query: 436 AASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSS 495
++ G VS G +++SK+ GE E +L+ +F EA PSIIF DE+D L P R
Sbjct: 409 --NEVGAYVSVI--NGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKREG 464
Query: 496 KQEQIHNSIVSTLLALMDGLDSRG---QVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
Q ++ +V++LL LMDG+ S G +V+++GATNR A+D ALRRPGRFD+E +P
Sbjct: 465 AQSEVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIP 524
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
+ R +IL R+ ++ LA + GY GADLKALC EA + A R +
Sbjct: 525 NAQDRLDILQKLLRRVPHLLTKAELLRLANNAHGYVGADLKALCNEAGLHALRRVLRKQP 584
Query: 613 TSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHRGATV 649
D + + +T+ F++ M+ I P+A R +
Sbjct: 585 NLPDSKVAGMVKITLN--DFLQGMNDIRPSAMREVAI 619
Score = 180 bits (457), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 164/289 (56%), Gaps = 30/289 (10%)
Query: 362 KGGADIQPLQVDE------SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRG 415
+G DI+P + E +VS+ DIGGL LK+ V +PL +P F I PP+G
Sbjct: 604 QGMNDIRPSAMREVAIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQPPKG 663
Query: 416 VLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQR 475
VLL GPPG KT+IA+AL A+++G ++F KG ++++K+VGE+ER ++ +F +A+
Sbjct: 664 VLLYGPPGCSKTMIAKAL---ANESG--LNFLAIKGPELMNKYVGESERAVREIFRKARA 718
Query: 476 NQPSIIFFDEIDGLAPVR--SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAI 533
PSIIFFDE+D LA R SS + + +++ LL MDG++ V ++ ATNR D I
Sbjct: 719 VAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRI 778
Query: 534 DGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADL 592
D AL RPGR DR PLP R EIL++ P S E+ EL Y GA++
Sbjct: 779 DKALMRPGRIDRIIYVPLPDAATRREILNLQFHSM--PISNEVDLDELVLQTDTYSGAEI 836
Query: 593 KALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITP 641
A+C EAA+ A E ++ + + K HF +A+S +TP
Sbjct: 837 IAVCKEAALLALEE--------------NIKADCIMKRHFTQALSIVTP 871
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum
(isolate 3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 151/234 (64%), Gaps = 6/234 (2%)
Query: 373 DESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARA 432
++ ++++D+GG+ + ++ ++E++ PL YP+ F S I+ P+GVL+ G PGTGKT IA+A
Sbjct: 521 NDDITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKA 580
Query: 433 LACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPV 492
+A ++ Y+ G +++SK +GE+E++L+ +F++A P IIF DEID +A
Sbjct: 581 IANESN-----AYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANK 635
Query: 493 RSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
RS ++ +VS LL LMDGL V+++ ATNR ++ID ALRR GRFDRE P+P
Sbjct: 636 RSKSNNELEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVP 695
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
+ R EIL T+K K P L+ ++A C GY GADL LC EAAI+ +E
Sbjct: 696 DEQGRYEILLTKTKKMKLDPDVNLR-KIAKECHGYVGADLAQLCFEAAIQCIKE 748
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/234 (35%), Positives = 135/234 (57%), Gaps = 9/234 (3%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V+++DIGG++E + LKE + +PL Y + ++ +G+LL GPPG GKTL+A+A+A
Sbjct: 930 TVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKAIA 989
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
K +F KG ++L+ W GE+E ++ LF++A+ P IIFFDEID LA R+
Sbjct: 990 NEC-----KANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERN 1044
Query: 495 SK-QEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
S + +++ +L +DG++ + + +I ATNR D +D AL RPGR D+ LP
Sbjct: 1045 SNTNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISLPD 1104
Query: 554 CEARAEILDIHTRKWKQPPSRELK-SELAASCVGYCGADLKALCTEAAIRAFRE 606
++R I + P + ++ ++A G+ GAD+ LC A A +E
Sbjct: 1105 LKSRYSIFKAILK--NTPLNEDVDIHDMAKRTEGFSGADITNLCQSAVNEAIKE 1156
>sp|O28303|PAN_ARCFU Proteasome-activating nucleotidase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=pan PE=1 SV=1
Length = 398
Score = 203 bits (517), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 117/271 (43%), Positives = 163/271 (60%), Gaps = 14/271 (5%)
Query: 351 TSGIQTAGPSSKGGADIQPLQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASY 408
T I P+SK + +V+E VS++DIGGL I+ ++E V PLL P+ FA
Sbjct: 112 TLAIVNVLPTSKDPM-VYGFEVEEKPEVSYEDIGGLDVQIEEIREAVELPLLKPELFAEV 170
Query: 409 HITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKL 468
I PP+GVLL GPPGTGKTL+A+A+A + +F G++ + K++GE R ++
Sbjct: 171 GIEPPKGVLLYGPPGTGKTLLAKAVANQT-----RATFIRVVGSEFVQKYIGEGARLVRE 225
Query: 469 LFEEAQRNQPSIIFFDEIDGLAPVRS----SKQEQIHNSIVSTLLALMDGLDSRGQVVLI 524
+F+ A+ PSIIF DE+D +A R+ S ++ +++ LLA +DG D RG V +I
Sbjct: 226 VFQLAKEKAPSIIFIDELDAIAARRTNSDTSGDREVQRTMMQ-LLAELDGFDPRGDVKVI 284
Query: 525 GATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASC 584
GATNR+D +D A+ RPGRFDR PLP E R +I IHTRK K + K ELA
Sbjct: 285 GATNRIDILDPAILRPGRFDRIIEVPLPTFEGRIQIFKIHTRKMKLAEDVDFK-ELARIT 343
Query: 585 VGYCGADLKALCTEAAIRAFREKYPQVYTSD 615
G GAD+KA+CTEA + A RE+ +V D
Sbjct: 344 EGASGADIKAICTEAGMFAIREERAKVTMLD 374
>sp|Q8TX03|PAN_METKA Proteasome-activating nucleotidase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=pan PE=3
SV=1
Length = 436
Score = 197 bits (501), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 120/273 (43%), Positives = 158/273 (57%), Gaps = 16/273 (5%)
Query: 359 PSSKGGADIQPLQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGV 416
PS K + ++VDES VS+DDIGGL E I ++E+V PL P+ F + PP+GV
Sbjct: 158 PSEKDSR-VLAMEVDESPDVSYDDIGGLDEQIREIREVVEKPLKEPELFEKVGVEPPKGV 216
Query: 417 LLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRN 476
LL GPPGTGKTL+A+A+A A +F +++ K++GE R ++ LFE A+
Sbjct: 217 LLYGPPGTGKTLLAKAVANHAD-----ATFIRLAAPELVQKFIGEGARLVRELFELAREK 271
Query: 477 QPSIIFFDEIDGLAPVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDA 532
PSIIF DEID + R +S ++ ++ + LLA MDG D + +I ATNR D
Sbjct: 272 APSIIFIDEIDAIGARRMRDATSGDREVQRTL-TQLLAEMDGFDPLDDIKVIAATNRKDI 330
Query: 533 IDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADL 592
+D AL RPGRFDR PLP E R EI IHTR +L+ LA G GAD+
Sbjct: 331 LDPALLRPGRFDRHIKIPLPDEEGRYEIFKIHTRDMNLAEDVDLQK-LAKITEGASGADI 389
Query: 593 KALCTEAAIRAFREKYPQVYTSDDKFLIDVDSV 625
KA+CTEA + A RE + T DD FL VD V
Sbjct: 390 KAICTEAGMMAIREDR-DIVTMDD-FLKAVDRV 420
>sp|O57940|PAN_PYRHO Proteasome-activating nucleotidase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=pan PE=3 SV=1
Length = 399
Score = 194 bits (494), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 111/267 (41%), Positives = 160/267 (59%), Gaps = 12/267 (4%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V+++DIGGL + + L+E + PL +P+ F I PP+GVLL GPPG GKTL+A+ALA
Sbjct: 136 NVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLYGPPGCGKTLMAKALA 195
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR- 493
+ +F G++++ K++GE R + LFE A+ P+IIF DEID + R
Sbjct: 196 HEVN-----ATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRM 250
Query: 494 --SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
++ E+ N + LLA MDG D RG V +I ATNR D +D AL RPGRFDR PL
Sbjct: 251 DETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPL 310
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P E R EIL +HTR+ K +L++ +A G GADLKA+ TEA + A RE+ +
Sbjct: 311 PDFEGRLEILKVHTRRMKL-KGVDLRA-IAEMTEGASGADLKAIATEAGMFAIRER--RT 366
Query: 612 YTSDDKFLIDVDSVTVEKYHFIEAMST 638
Y + + FL VD V + ++ +++
Sbjct: 367 YVTQEDFLKAVDKVLGNERKLLQQITS 393
>sp|A7I8B8|PAN_METB6 Proteasome-activating nucleotidase OS=Methanoregula boonei (strain
6A8) GN=pan PE=3 SV=1
Length = 436
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 107/258 (41%), Positives = 152/258 (58%), Gaps = 13/258 (5%)
Query: 378 FDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACAA 437
+ DIGGL E I+ ++E V PL P+ F I PP+GVLL GPPGTGKTL+A+A+A
Sbjct: 177 YTDIGGLKEQINEVREAVELPLKRPELFTQIGIEPPKGVLLYGPPGTGKTLLAKAVAHET 236
Query: 438 SKAGQKVSFYMRK-GADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRSSK 496
+ + +MR G++++ K++GE R ++ LF+ A++ P+IIF DEID + R+
Sbjct: 237 N------AHFMRVVGSELVQKYIGEGARLVRELFDLAKKKAPTIIFIDEIDAVGASRTEA 290
Query: 497 QEQIHNSIVSTLLAL---MDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPG 553
+ TL+ L MDG ++RG V +IGATNR+D +D AL RPGRFDR PLP
Sbjct: 291 NTSGDREVQRTLMQLLAGMDGFETRGDVKIIGATNRIDILDKALLRPGRFDRIIEIPLPD 350
Query: 554 CEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVYT 613
E R IL +HTR + L E+A G GADL+A+C EA + A R + P +
Sbjct: 351 EEGRLSILKVHTRTLTMEETVNL-PEIAGLTEGKNGADLRAICMEAGMYAIRNERPAITR 409
Query: 614 SDDKFLIDVDSVTVEKYH 631
D FL ++ V ++ H
Sbjct: 410 ED--FLSAIEKVRLDFSH 425
>sp|Q9V287|PAN_PYRAB Proteasome-activating nucleotidase OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=pan PE=3 SV=2
Length = 396
Score = 194 bits (492), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/293 (40%), Positives = 170/293 (58%), Gaps = 15/293 (5%)
Query: 351 TSGIQTAGPSSKGGADIQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASY 408
T I PSSK + +V E +V+++DIGGL + + L+E + PL +P+ F
Sbjct: 108 TMAIIELLPSSKDPT-VLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEV 166
Query: 409 HITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKL 468
I PP+GVLL GPPG GKTL+A+ALA + +F G++++ K++GE R +
Sbjct: 167 GIDPPKGVLLYGPPGCGKTLMAKALAHEVN-----ATFIRVVGSELVRKYIGEGARLVHE 221
Query: 469 LFEEAQRNQPSIIFFDEIDGLAPVR---SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIG 525
LFE A+ P+IIF DEID + R ++ E+ N + LLA MDG D RG V +I
Sbjct: 222 LFELAKEKAPTIIFIDEIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIA 281
Query: 526 ATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCV 585
ATNR D +D AL RPGRFDR PLP E R EIL +HTR+ K + +L+ +A
Sbjct: 282 ATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMKL-KNVDLRV-IAEITE 339
Query: 586 GYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMST 638
G GADLKA+ TEA + A RE+ + Y + + FL VD V + ++ +++
Sbjct: 340 GASGADLKAIATEAGMFAIRER--RTYVTQEDFLKAVDKVLGNERKLLQQITS 390
>sp|Q58576|PAN_METJA Proteasome-activating nucleotidase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=pan PE=1 SV=1
Length = 430
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/254 (42%), Positives = 154/254 (60%), Gaps = 13/254 (5%)
Query: 368 QPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTG 425
+ ++VDE +V ++DIGGL + + ++E+V PL +P+ F I PP+G+LL GPPGTG
Sbjct: 157 KAMEVDERPNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTG 216
Query: 426 KTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDE 485
KTL+A+A+A + +F G++++ K++GE +K +F+ A+ PSIIF DE
Sbjct: 217 KTLLAKAVATETN-----ATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDE 271
Query: 486 IDGLAPVRSSK----QEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPG 541
ID +A R+ ++ +++ LLA MDG D+RG V +IGATNR D +D A+ RPG
Sbjct: 272 IDAIAAKRTDALTGGDREVQRTLMQ-LLAEMDGFDARGDVKIIGATNRPDILDPAILRPG 330
Query: 542 RFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAI 601
RFDR P P + R EIL IHTRK L+ E+A G GA+LKA+CTEA +
Sbjct: 331 RFDRIIEVPAPDEKGRLEILKIHTRKMNLAEDVNLE-EIAKMTEGCVGAELKAICTEAGM 389
Query: 602 RAFREKYPQVYTSD 615
A RE V D
Sbjct: 390 NAIRELRDYVTMDD 403
>sp|D4GUJ7|PAN1_HALVD Proteasome-activating nucleotidase 1 OS=Haloferax volcanii (strain
ATCC 29605 / DSM 3757 / JCM 8879 / NBRC 14742 / NCIMB
2012 / VKM B-1768 / DS2) GN=pan1 PE=2 SV=2
Length = 406
Score = 193 bits (491), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 104/252 (41%), Positives = 151/252 (59%), Gaps = 13/252 (5%)
Query: 370 LQVDES--VSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKT 427
+QV+ S V+++DIGGL E + ++E V PL P+ FA I PP GVLL GPPGTGKT
Sbjct: 139 MQVEHSPDVTYEDIGGLEEQMQEVRETVEMPLDRPEMFAEVGIDPPSGVLLYGPPGTGKT 198
Query: 428 LIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEID 487
++A+A+A + SF G++++ K++GE + ++ LFE A+ N+P++IF DEID
Sbjct: 199 MLAKAVANQTN-----ASFIKMAGSELVHKFIGEGAKLVRDLFEVARENEPAVIFIDEID 253
Query: 488 GLAPVR----SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRF 543
+A R +S ++ +++ LLA MDG D RG + +I ATNR D +D A+ RPGRF
Sbjct: 254 AIASKRTDSKTSGDAEVQRTMMQ-LLAEMDGFDERGNIRIIAATNRFDMLDPAILRPGRF 312
Query: 544 DREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRA 603
DR P P + R I IHTRK + ELA GAD+KA+CTEA + A
Sbjct: 313 DRLIEVPKPNEDGREIIFQIHTRKMNVSDDVDF-VELAEMADNASGADIKAVCTEAGMFA 371
Query: 604 FREKYPQVYTSD 615
R+ +++ D
Sbjct: 372 IRDDRTEIFMQD 383
>sp|Q8U4H3|PAN_PYRFU Proteasome-activating nucleotidase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=pan PE=3 SV=1
Length = 396
Score = 193 bits (490), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 119/294 (40%), Positives = 168/294 (57%), Gaps = 17/294 (5%)
Query: 351 TSGIQTAGPSSKGGADIQPLQVDE--SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASY 408
T I P+SK A + +V E +V+++DIGGL + + L+E + PL +P+ F
Sbjct: 108 TMAIIEILPASKDPA-VLGFEVVERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEV 166
Query: 409 HITPPRGVLLCGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKL 468
I PP+GVLL GPPG GKTL+A+A+A + +F G++++ K++GE R +
Sbjct: 167 GIDPPKGVLLYGPPGCGKTLMAKAIAHEVN-----ATFIRVVGSELVRKYIGEGARLVHE 221
Query: 469 LFEEAQRNQPSIIFFDEIDGLAPVR---SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIG 525
LFE A+ P+IIF DEID + R ++ E+ N + LLA MDG D RG V +I
Sbjct: 222 LFELAKEKAPTIIFIDEIDAIGAKRLDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIA 281
Query: 526 ATNRVDAIDGALRRPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCV 585
ATNR D +D AL RPGRFDR PLP E R EIL +HTR+ K R + L A
Sbjct: 282 ATNRPDILDPALLRPGRFDRLIEVPLPDFEGRLEILKVHTRRMK---LRGVDLRLIAELT 338
Query: 586 -GYCGADLKALCTEAAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMST 638
G GADLKA+ TEA + A RE+ + Y + + FL +D V + I+ + +
Sbjct: 339 EGASGADLKAIATEAGMFAIRER--RTYVTQEDFLKAIDKVLGNEKKIIQQIMS 390
>sp|P32794|AFG2_YEAST ATPase family gene 2 protein OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=AFG2 PE=1 SV=1
Length = 780
Score = 192 bits (487), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 112/279 (40%), Positives = 170/279 (60%), Gaps = 21/279 (7%)
Query: 374 ESVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARAL 433
E +S+ +GGL + I++LK + PL P F+S+ ++PPRG+LL GPPGTGKT++ R +
Sbjct: 240 EPLSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVV 299
Query: 434 ACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR 493
A ++ ++ G ++SK++GE E L+ +F EA++ QPSIIF DEID +AP R
Sbjct: 300 ANTSNAHVLTIN-----GPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNR 354
Query: 494 SSKQE-QIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
++ ++ + +V+TLL LMDG+ + G+VV+I ATNR +++D ALRRPGRFD+E +P
Sbjct: 355 ANDDSGEVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGIP 414
Query: 553 GCEARAEILDIHTRKWKQPPS--RELKSE----LAASCVGYCGADLKALCTEAAIRAFRE 606
+AR DI T+++ + S L SE +A+ GY GADL ALC E+ ++ +
Sbjct: 415 DVDAR---FDILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQR 471
Query: 607 KYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTITPAAHR 645
+ DKF + V VE AM I P+A R
Sbjct: 472 GL-GTDANIDKFSLKVTLKDVES-----AMVDIRPSAMR 504
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 110/281 (39%), Positives = 149/281 (53%), Gaps = 25/281 (8%)
Query: 365 ADIQPLQVDE------SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLL 418
DI+P + E V + DIGG E +KEM+ PL + FA I+ P+GVLL
Sbjct: 496 VDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASETFARLGISAPKGVLL 555
Query: 419 CGPPGTGKTLIARALACAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQP 478
GPPG KTL A+ALA + ++F KG ++ +K+VGE+ER ++ +F +A+ P
Sbjct: 556 YGPPGCSKTLTAKALATESG-----INFLAVKGPEIFNKYVGESERAIREIFRKARSAAP 610
Query: 479 SIIFFDEIDGLAPVRSSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALR 538
SIIFFDEID L+P R N ++++LL +DG++ VV++ ATNR D ID AL
Sbjct: 611 SIIFFDEIDALSPDRDGSSTSAANHVLTSLLNEIDGVEELKGVVIVAATNRPDEIDAALL 670
Query: 539 RPGRFDREFNFPLPGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTE 598
RPGR DR P AR EIL T+K+ S ELA GY GA++ LC E
Sbjct: 671 RPGRLDRHIYVGPPDVNARLEILKKCTKKFNTEESGVDLHELADRTEGYSGAEVVLLCQE 730
Query: 599 AAIRAFREKYPQVYTSDDKFLIDVDSVTVEKYHFIEAMSTI 639
A + A E D+D VE HF +A I
Sbjct: 731 AGLAAIME--------------DLDVAKVELRHFEKAFKGI 757
>sp|Q2FQ56|PAN_METHJ Proteasome-activating nucleotidase OS=Methanospirillum hungatei
(strain JF-1 / DSM 864) GN=pan PE=3 SV=1
Length = 412
Score = 191 bits (484), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 145/243 (59%), Gaps = 11/243 (4%)
Query: 377 SFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALACA 436
+++DIGGL + I ++E V P+ PD F I PP+GVLL GPPGTGKTL+A+A+A
Sbjct: 151 TYEDIGGLEKQIMEIREAVELPMTRPDLFEKIGINPPKGVLLYGPPGTGKTLLAKAVAHE 210
Query: 437 ASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS-- 494
F G++++ K++GE R ++ LF+ A+ PSI+F DEID + R+
Sbjct: 211 THAI-----FLHTVGSELVQKYIGEGARLVRELFDLAKEKAPSIVFIDEIDAIGASRTEA 265
Query: 495 --SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLP 552
S ++ +++ LLA MDG + RG V +IGATNR+D +D AL RPGRFDR PLP
Sbjct: 266 MTSGDREVQRTLMQ-LLAAMDGFEPRGDVKIIGATNRIDILDAALLRPGRFDRIIEIPLP 324
Query: 553 GCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQVY 612
E R IL +HTR +L E+A G GA+L A+C EA + A R+++PQV
Sbjct: 325 DTEGRYSILKVHTRCMNLSEDVDL-MEVARLTEGRNGAELNAICMEAGMFAIRKEHPQVD 383
Query: 613 TSD 615
D
Sbjct: 384 QED 386
>sp|Q5JHS5|PAN_PYRKO Proteasome-activating nucleotidase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=pan PE=3
SV=1
Length = 397
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/255 (42%), Positives = 151/255 (59%), Gaps = 12/255 (4%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
V+++DIGGL + + L+E + PL +P+ F I PP+GVLL GPPG GKTL+A+A+A
Sbjct: 134 KVTYNDIGGLEKQLQELREAIELPLKHPELFEQVGIEPPKGVLLYGPPGCGKTLMAKAVA 193
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVR- 493
+ +F G++++ K++GE R + LFE A+ P+IIF DEID + R
Sbjct: 194 NHVN-----ATFIRVVGSELVRKFIGEGARLVHELFELAKEKAPTIIFIDEIDAIGAKRM 248
Query: 494 --SSKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPL 551
++ E+ N + LLA MDG D RG V +I ATNR D +D AL RPGRFDR PL
Sbjct: 249 DETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPGRFDRLIEVPL 308
Query: 552 PGCEARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFREKYPQV 611
P + R EIL +HTRK +L+ +A G GADLKA+ TEA + A R++ +
Sbjct: 309 PDYQGRLEILKVHTRKMNL-KGVDLRV-IAEITEGASGADLKAIATEAGMFAIRDR--RT 364
Query: 612 YTSDDKFLIDVDSVT 626
Y + D FL VD V
Sbjct: 365 YVTQDDFLKAVDKVI 379
>sp|O60058|AFG2_SCHPO ATPase family gene 2 protein OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=afg2 PE=3 SV=1
Length = 809
Score = 189 bits (480), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/231 (41%), Positives = 143/231 (61%), Gaps = 5/231 (2%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V+F IGGL I ++++V P P+ F ++I PPRGVLL GPPGTGKT++ RA+A
Sbjct: 275 AVTFSSIGGLQAQIAQIRDIVELPFQNPELFKFFNIMPPRGVLLYGPPGTGKTMVMRAVA 334
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
A+ + G V+ K++GE E +L+ +FE+A+ +QPSIIF DEID LAP R+
Sbjct: 335 AEAN-----AQVFTIDGPSVVGKYLGETESRLRKIFEDARAHQPSIIFIDEIDALAPKRT 389
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
+ + V+TLL L+DG+ + G+VV+I ATNR ++ID ALRRPGR ++E +P
Sbjct: 390 EDVSEAESRAVATLLTLLDGMANAGKVVVIAATNRPNSIDEALRRPGRLEKEIEIGIPDK 449
Query: 555 EARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFR 605
AR +I+ + + +LA+ Y GADL A+ EAA+RA +
Sbjct: 450 SARLDIIKLLLSGVPNEINDAQLEDLASRTHAYVGADLAAVVREAALRAIK 500
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 135/232 (58%), Gaps = 8/232 (3%)
Query: 375 SVSFDDIGGLSEYIDALKEMVFFPLLYPDFFASYHITPPRGVLLCGPPGTGKTLIARALA 434
+V + DIGG E LKE V +PL + + F+ + PP+GVLL GPPG KT+ A+A+A
Sbjct: 544 NVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVLLYGPPGCSKTITAKAIA 603
Query: 435 CAASKAGQKVSFYMRKGADVLSKWVGEAERQLKLLFEEAQRNQPSIIFFDEIDGLAPVRS 494
++F KG ++ K+VGE+ER ++ +F++A++ PS+IFFDEID L R
Sbjct: 604 TETG-----LNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIFFDEIDALTANRG 658
Query: 495 SKQEQIHNSIVSTLLALMDGLDSRGQVVLIGATNRVDAIDGALRRPGRFDREFNFPLPGC 554
++ + +V+ LL +DG+++ V+++ ATNR D ID AL RPGR DR P
Sbjct: 659 --EDNSSDRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRPGRLDRLLYVGPPNF 716
Query: 555 EARAEILDIHTRKWKQPPSRELKSELAASCVGYCGADLKALCTEAAIRAFRE 606
EAR +I+ I K K +L +A G GA++ ALC EA + A E
Sbjct: 717 EARKQIVKIQAEKMKFAEDVDLDL-IAEKTEGCSGAEVVALCQEAGLIAMHE 767
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 312,927,168
Number of Sequences: 539616
Number of extensions: 14568327
Number of successful extensions: 137650
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1862
Number of HSP's successfully gapped in prelim test: 2685
Number of HSP's that attempted gapping in prelim test: 81503
Number of HSP's gapped (non-prelim): 26499
length of query: 791
length of database: 191,569,459
effective HSP length: 126
effective length of query: 665
effective length of database: 123,577,843
effective search space: 82179265595
effective search space used: 82179265595
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)