Query 003860
Match_columns 791
No_of_seqs 338 out of 2348
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 06:24:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003860.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003860hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3se6_A Endoplasmic reticulum a 100.0 7E-152 2E-156 1364.1 79.2 767 5-790 64-878 (967)
2 2xdt_A Endoplasmic reticulum a 100.0 2E-147 7E-152 1327.8 78.8 763 5-790 4-810 (897)
3 4fke_A Aminopeptidase N; zinc 100.0 3E-148 9E-153 1339.2 68.8 768 4-790 5-818 (909)
4 1z5h_A Tricorn protease intera 100.0 6E-135 2E-139 1203.0 61.7 704 14-790 1-708 (780)
5 2gtq_A Aminopeptidase N; alani 100.0 6E-100 2E-104 906.1 52.6 733 6-789 9-810 (867)
6 3ebh_A PFA-M1, M1 family amino 100.0 1.7E-91 5.8E-96 824.0 58.7 736 11-790 11-832 (889)
7 3b34_A Aminopeptidase N; prote 100.0 4E-90 1.4E-94 818.5 58.8 719 6-775 32-808 (891)
8 3cia_A Cold-active aminopeptid 100.0 4.5E-84 1.6E-88 748.1 22.0 526 7-618 19-560 (605)
9 3u9w_A Leukotriene A-4 hydrola 100.0 2.7E-82 9.4E-87 733.6 29.1 448 7-476 6-474 (608)
10 2xq0_A LTA-4 hydrolase, leukot 100.0 5.9E-82 2E-86 732.2 17.6 527 7-619 21-589 (632)
11 3rjo_A Endoplasmic reticulum a 100.0 2.8E-60 9.6E-65 527.5 35.7 317 456-790 1-327 (419)
12 4fgm_A Aminopeptidase N family 100.0 8.9E-29 3E-33 282.4 21.0 298 154-459 119-451 (597)
13 1bqb_A Protein (aureolysin); h 80.3 5.4 0.00019 40.5 8.9 106 234-340 68-178 (301)
14 2y3u_A Collagenase, collagenas 79.2 3 0.0001 48.2 7.3 39 301-339 422-469 (785)
15 1lsh_A Lipovitellin (LV-1N, LV 75.3 10 0.00035 46.2 11.0 195 550-763 356-558 (1056)
16 3dnz_A Thermolysin; hydrolase, 73.6 6.1 0.00021 40.3 7.0 102 232-341 69-177 (316)
17 1u4g_A Elastase, pseudolysin; 71.1 92 0.0031 31.5 19.8 98 233-341 73-175 (301)
18 4ger_A Gentlyase metalloprotea 71.0 6.6 0.00022 39.9 6.5 109 232-351 62-177 (304)
19 2vqx_A Metalloproteinase; ther 70.7 7.5 0.00026 40.2 7.0 105 232-341 89-197 (341)
20 3cqb_A Probable protease HTPX 70.6 7.1 0.00024 33.0 5.8 67 239-316 27-98 (107)
21 3isy_A Bsupi, intracellular pr 51.0 93 0.0032 26.7 9.2 26 87-112 81-106 (120)
22 2qk1_A Protein STU2; STU2P, XM 51.0 1.3E+02 0.0046 29.2 12.1 131 566-715 30-176 (249)
23 2c9r_A COPC, copper resistance 34.4 1.3E+02 0.0044 24.9 7.4 57 45-105 17-83 (102)
24 1r55_A ADAM 33; metalloproteas 32.5 36 0.0012 32.6 4.3 14 300-313 135-148 (214)
25 3c37_A Peptidase, M48 family; 32.2 59 0.002 32.0 5.9 19 298-316 97-115 (253)
26 1lyq_A PCOC copper resistance 31.7 1.4E+02 0.0048 24.8 7.2 57 45-105 18-85 (104)
27 1bud_A Protein (acutolysin A); 28.7 65 0.0022 30.2 5.3 14 300-313 132-145 (197)
28 1yp1_A FII; FII hydrolase; 1.9 28.2 63 0.0021 30.5 5.1 13 301-313 135-147 (202)
29 2w15_A Zinc metalloproteinase 28.0 72 0.0025 30.0 5.5 14 300-313 135-148 (202)
30 3lmc_A Peptidase, zinc-depende 27.6 1.5E+02 0.0053 28.0 7.4 20 294-313 136-155 (210)
31 2ero_A VAP-1, vascular apoptos 27.3 71 0.0024 34.2 5.8 14 300-313 145-158 (427)
32 3nqx_A MCP-02, secreted metall 26.9 5E+02 0.017 26.1 19.9 99 233-341 74-176 (306)
33 2ejq_A Hypothetical protein TT 24.4 41 0.0014 29.4 2.6 27 296-323 84-110 (130)
34 3ltj_A Alpharep-4; protein eng 23.4 4.1E+02 0.014 23.9 11.9 172 546-763 10-181 (201)
35 3iuk_A Uncharacterized protein 23.1 1.2E+02 0.004 33.8 6.7 54 406-459 495-554 (562)
36 3e11_A Predicted zincin-like m 21.6 52 0.0018 28.0 2.7 34 278-313 69-102 (114)
37 1atl_A Atrolysin C; metalloend 21.5 65 0.0022 30.4 3.7 14 300-313 135-148 (202)
38 1qua_A Acutolysin-C, hemorrhag 21.2 67 0.0023 30.1 3.8 13 301-313 135-147 (197)
No 1
>3se6_A Endoplasmic reticulum aminopeptidase 2; thermolysin-like catalytic domain, zinc BIND glycosylation, hydrolase; HET: LYS NAG MES MAN; 3.08A {Homo sapiens} PDB: 4e36_A*
Probab=100.00 E-value=6.6e-152 Score=1364.10 Aligned_cols=767 Identities=35% Similarity=0.618 Sum_probs=697.6
Q ss_pred CCCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeecCCCC--CcccCeeEEEe
Q 003860 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSS--KALEPTKVELV 82 (791)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~--~~~~~~~~~~~ 82 (791)
-..+|||++++|.||+|+|++|+++.+|+|+|+|++++.++++.|+||+++|+|+++.+.+..+... .........++
T Consensus 64 ~~~~RLP~~v~P~hY~L~L~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~I~~v~v~~~~~~~~~~~~~~~~~~~~~ 143 (967)
T 3se6_A 64 WQELRLPSVVIPLHYDLFVHPNLTSLDFVASEKIEVLVSNATQFIILHSKDLEITNATLQSEEDSRYMKPGKELKVLSYP 143 (967)
T ss_dssp CCCSSCCTTEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCCSEEEEECSSCEEEEEEEEECC---CCSSCEECEEEEEG
T ss_pred cccccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEEEcCCCEEEEECCCCEEEEEEEeccCCcccccccceeeeEEec
Confidence 4568999999999999999999999999999999999999999999999999999999875321100 01111222333
Q ss_pred cCCeEEEEEeCCCCCCc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeeeccccCCCCCCCceeeccCCCCCceEEEE
Q 003860 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (791)
Q Consensus 83 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~ar~~fPc~DeP~~ka~f~i 160 (791)
.++.+.|.++++|++| .|+|+|.|+|++++++.|||++.|.+ +|+.+++++|||||++||+||||||||++||+|+|
T Consensus 144 -~~~~l~i~l~~~L~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~FPC~DeP~~KAtf~i 222 (967)
T 3se6_A 144 -AHEQIALLVPEKLTPHLKYYVAMDFQAKLGDGFEGFYKSTYRTLGGETRILAVTDFEPTQARMAFPCFDEPLFKANFSI 222 (967)
T ss_dssp -GGTEEEEECSSCCCTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTGGGTSCBCCSTTCCBEEEE
T ss_pred -CCCEEEEEcCCccCCCCeEEEEEEEEEecCCCccceeeeeeEcCCCceEEEEEEecccCCCCeEEEecCCcCceeEEEE
Confidence 5678999999999999 89999999999999999999999976 78889999999999999999999999999999999
Q ss_pred EEEeCCCCeEeecCcccce-eecCCeEEEEEEcCCCCcceEEEEEEeeeeEeeccccCCeEEEEEEeCCchhhHHHHHHH
Q 003860 161 TLDVPSELVALSNMPVIDE-KVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 239 (791)
Q Consensus 161 ~i~~p~~~~~~sn~~~~~~-~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~~ 239 (791)
+|++|++|+|+|||++.++ ...+++++++|+.++|||||++||+||+|+.++..+.+|+++++|++|+..++++++++.
T Consensus 223 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~F~~t~pmstYLva~~vg~f~~~~~~~~~gv~v~v~~~p~~~~~~~~al~~ 302 (967)
T 3se6_A 223 KIRRESRHIALSNMPKVKTIELEGGLLEDHFETTVKMSTYLVAYIVCDFHSLSGFTSSGVKVSIYASPDKRNQTHYALQA 302 (967)
T ss_dssp EEEECTTCEEEESSCEEEEEECTTSCEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECGGGGGGGHHHHHH
T ss_pred EEEECCCcEEEeCCCcccceecCCCeEEEEEecCCCccceeEEEEEeceEEEEeecCCCcEEEEEeCcchHHHHHHHHHH
Confidence 9999999999999998765 345678999999999999999999999999988666779999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHHhcCccC
Q 003860 240 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 319 (791)
Q Consensus 240 ~~~~l~~~e~~fg~~yP~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~Vt 319 (791)
+++++++||++||+|||++|+|+|++|+|+.||||||||++|+|..+|+++..++...++.++.+||||+|||||||+||
T Consensus 303 ~~~~l~~~e~~fg~~YP~~k~d~v~vPdf~~GaMEn~Glity~e~~ll~d~~~s~~~~k~~~~~vIaHElAHqWFGnlVT 382 (967)
T 3se6_A 303 SLKLLDFYEKYFDIYYPLSKLDLIAIPDFAPGAMENWGLITYRETSLLFDPKTSSASDKLWVTRVIAHELAHQWFGNLVT 382 (967)
T ss_dssp HHHHHHHHHHHHTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHGGGTBTTTEE
T ss_pred HHHHHHHHHHhcCCCCCcccccEEEecCCCCcccccCCccccchhheecCcccCCHHhhHhHHHHHHHHHHHHHhcCccc
Confidence 99999999999999999999999999999999999999999999999999988888888899999999999999999999
Q ss_pred ccccchhHHhhhHHHHHHHHHhhhhCCcchhHHHHHHHHHhhhhccccCCCCceeeecCCchhhhcccccccccchhHHH
Q 003860 320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (791)
Q Consensus 320 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (791)
|+||+|+|||||||+|++++++++.+|+|.+...|+.+...++..|+..++||+..++.++.++...|+.++|.||++||
T Consensus 383 ~~wW~dlWLnEGFAty~e~~~~~~~~p~~~~~~~~~~~~~~al~~D~~~~~~Pi~~~v~~~~~i~~~Fd~i~Y~KGa~vL 462 (967)
T 3se6_A 383 MEWWNDIWLNEGFAKYMELIAVNATYPELQFDDYFLNVCFEVITKDSLNSSRPISKPAETPTQIQEMFDEVSYNKGACIL 462 (967)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCHHHHHHHHHHHHHTTTTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCCccccHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHhhcccCCCCceeecCCHHHHHHhcchhhhhHHHHHH
Confidence 99999999999999999999999999999987777666557888999999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc---------------------------cCCCHHHHHHHhc
Q 003860 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG---------------------------SGEPVNKLMNSWT 452 (791)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~---------------------------s~~~l~~~~~~W~ 452 (791)
|||+..||++.|+++|+.|+++|+|++++++|||++|+++ +|.+|++||++|+
T Consensus 463 ~mL~~~lG~e~F~~gLr~Yl~~~~~~nat~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~dv~~~m~~W~ 542 (967)
T 3se6_A 463 NMLKDFLGEEKFQKGIIQYLKKFSYRNAKNDDLWSSLSNSCLESDFTSGGVCHSDPKMTSNMLAFLGENAEVKEMMTTWT 542 (967)
T ss_dssp HHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHCC-------------------------CCCCCCHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCcCHHHHHHHHh
Confidence 9999999999999999999999999999999999999995 6889999999999
Q ss_pred cCCCcceEEEEEeCcEEEEEEEeeccCCCC---------CCCeeEEEEEEEECcccceeeEEeecceeEEEecccccccc
Q 003860 453 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---------GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSI 523 (791)
Q Consensus 453 ~~~G~P~v~v~~~~~~~~l~Q~rf~~~~~~---------~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 523 (791)
.|+|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+|+..++.++.++.
T Consensus 543 ~q~G~Pvl~V~~~~~~~~l~Q~rf~~~~~~~~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~~~~------ 616 (967)
T 3se6_A 543 LQKGIPLLVVKQDGCSLRLQQERFLQGVFQEDPEWRALQERYLWHIPLTYSTSSSNVIHRHILKSKTDTLDLPE------ 616 (967)
T ss_dssp HSCSCEEEEEEEETTEEEEEEEECCCC-----------CCSCCCCCCEEEEESSCCCCEEECCCSSEEEEECSS------
T ss_pred cCCCCcEEEEEecCCEEEEEeeeecCCCCCCccccccccCCceEEEEEEEEeCCCCccceEEecCCceEEeccC------
Confidence 999999999999989999999999875432 23589999999887655445577776666666642
Q ss_pred cCCCCCCceEEEcCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHhccCChHHHHHHHhhcCCCC
Q 003860 524 SKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEET 601 (791)
Q Consensus 524 ~~~~~~~~~i~~N~~~~gyyrv~Yd~~~w~~l~~~L~~~--~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~ 601 (791)
.+ +||++|.++.||||||||+++|.+|+++|..+ .|++.+|||||+|+|+||++|.++++.+|++++||++|+
T Consensus 617 ---~~--~wi~~N~~~~GyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~ 691 (967)
T 3se6_A 617 ---KT--SWVKFNVDSNGYYIVHYEGHGWDQLITQLNQNHTLLRPKDRVGLIHDVFQLVGAGRLTLDKALDMTYYLQHET 691 (967)
T ss_dssp ---CC--SCEEESGGGCSSCEEEEETTHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHHTTGGGTCC
T ss_pred ---CC--ceEEEeCCccEEEEEecCHHHHHHHHHHHhhccCCCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCC
Confidence 34 89999999999999999999999999999753 699999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHhcc-ChhHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHH
Q 003860 602 EYTVLSNLITISYKIGRIAADA-RPELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNE 680 (791)
Q Consensus 602 ~~~~w~~~~~~l~~l~~~~~~~-~~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~ 680 (791)
+|+||.++++.|..+.+++... .++.+..|++|+++++.|+++++||+ +++++.++++|..++.+||.+|+++|+++
T Consensus 692 ~~~~w~~a~~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~--~~~~~~~~~lR~~il~~ac~~g~~~c~~~ 769 (967)
T 3se6_A 692 SSPALLEGLSYLESFYHMMDRRNISDISENLKRYLLQYFKPVIDRQSWS--DKGSVWDRMLRSALLKLACDLNHAPCIQK 769 (967)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTHHHHHHCCSS--CCSCHHHHHHHHHHHHHHHHTTCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHhccCChHHHHHHHHHHHHHHHHHHHHcCCC--CCCcHHHHHHHHHHHHHHHhCCCHHHHHH
Confidence 9999999999999999988632 25678899999999999999999998 46889999999999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHh
Q 003860 681 ASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFL 760 (791)
Q Consensus 681 A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~ct~d~~ll~~~L~~~ 760 (791)
|+++|++|++++....||||+|.+|||++++ ++++|+++|++|++++++.||..++.||||++|+++|+++|+++
T Consensus 770 A~~~f~~~~~~~~~~~i~~~lr~~Vyc~~~~-----~~~~~~~l~~~y~~s~~~~ek~~ll~aL~ct~d~~ll~~~L~~~ 844 (967)
T 3se6_A 770 AAELFSQWMESSGKLNIPTDVLKIVYSVGAQ-----TTAGWNYLLEQYELSMSSAEQNKILYALSTSKHQEKLLKLIELG 844 (967)
T ss_dssp HHHHHHHHHHTTTCSCCCHHHHHHHHHHHTT-----SHHHHHHHHHHHHHCSCHHHHHHHHHHHTTCCCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcccCChhhhhHhHhhhhc-----cHHHHHHHHHHHhccCCHHHHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 9999999998754446999999999998643 48899999999999999999999999999999999999999999
Q ss_pred ccCc-Cccccceeeee-eccc--cHHHHHHHHHh
Q 003860 761 LSSE-VRSQDAVYGLA-VSIE--GRETAWKWLKV 790 (791)
Q Consensus 761 l~~~-v~~qd~~~~~~-v~~~--g~~~~w~f~~~ 790 (791)
+++. ||+||+..++. |+.| |++++|+|+++
T Consensus 845 l~~~~i~~qd~~~~~~~v~~n~~g~~~~w~f~~~ 878 (967)
T 3se6_A 845 MEGKVIKTQNLAALLHAIARRPKGQQLAWDFVRE 878 (967)
T ss_dssp HHCSSSCGGGHHHHHHHHHHSTTHHHHHHHHHHH
T ss_pred hCcCcCcHhHHHHHHHHHHcChhHHHHHHHHHHH
Confidence 9874 99999999999 8887 99999999986
No 2
>2xdt_A Endoplasmic reticulum aminopeptidase 1; glycoprotein, metal-binding, metalloprotease, protease, hydrolase, adaptive immunity; HET: NAG; 2.70A {Homo sapiens} PDB: 2yd0_A* 3qnf_A* 3mdj_A*
Probab=100.00 E-value=2.1e-147 Score=1327.84 Aligned_cols=763 Identities=33% Similarity=0.598 Sum_probs=697.6
Q ss_pred CCCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeecCCCCCcc--cCeeEEEe
Q 003860 5 KGQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKAL--EPTKVELV 82 (791)
Q Consensus 5 ~~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~--~~~~~~~~ 82 (791)
-.++|||++++|.||+|+|.+|+++.+|+|+++|++++.++++.|+||+.+|+|.++++.+..+ ..+ ....+..+
T Consensus 4 ~~~~rLp~~~~p~hY~l~L~~d~~~~~f~G~v~I~~~~~~~~~~I~L~~~~l~I~~v~v~~~~~---~~~~~~~~~~~~~ 80 (897)
T 2xdt_A 4 WNKIRLPEYVIPVHYDLLIHANLTTLTFWGTTKVEITASQPTSTIILHSHHLQISRATLRKGAG---ERLSEEPLQVLEH 80 (897)
T ss_dssp CCCSSCCSSEEEEEEEEEEEEETTTTEEEEEEEEEEEESSCEEEEEEECSSCEEEEEEEEEC-------CEEEECEEEEE
T ss_pred cccCcCCCCcEeeEEEEEEEEecCCCeEEEEEEEEEEEEcCCCEEEEEeCCCEEEEEEEEecCC---cccccccceeEEc
Confidence 4578999999999999999999999999999999999998899999999999999999975311 112 23345567
Q ss_pred cCCeEEEEEeCCCCCCc-eEEEEEEEEeeeCCCCcceEEeeecc-CCeeeeeccccCCCCCCCceeeccCCCCCceEEEE
Q 003860 83 EADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYEL-NGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (791)
Q Consensus 83 ~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~-~g~~~~~~~t~~ep~~ar~~fPc~DeP~~ka~f~i 160 (791)
..++.++|.++++|++| .++|+|.|+|.+++++.|||++.|.+ +|+.+++++|||||.+||+||||||+|++||+|+|
T Consensus 81 ~~~~~l~i~l~~~L~~g~~~~L~i~y~g~~~~~~~G~y~s~y~~~~g~~~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~i 160 (897)
T 2xdt_A 81 PRQEQIALLAPEPLLVGLPYTVVIHYAGNLSETFHGFYKSTYRTKEGELRILASTQFEPTAARMAFPCFDEPAFKASFSI 160 (897)
T ss_dssp TTTTEEEEEEEEEECTTCCEEEEEEEEEECBSSSSEEEEEEEECTTSCEEEEEEEECTTTTHHHHSCBCCSTTSCBEEEE
T ss_pred CCCcEEEEEeCCccCCCCEEEEEEEEEEEeCCCCceeEeeeeecCCCceeEEEEecceecccceEEeccCCccccCeEEE
Confidence 77889999999999999 79999999999999999999999965 68888999999999999999999999999999999
Q ss_pred EEEeCCCCeEeecCccccee-ecCCeEEEEEEcCCCCcceEEEEEEeeeeEeeccccCCeEEEEEEeCCchhhHHHHHHH
Q 003860 161 TLDVPSELVALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNV 239 (791)
Q Consensus 161 ~i~~p~~~~~~sn~~~~~~~-~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~~ 239 (791)
+|++|++|+|+|||++.++. ..+++++++|+.++|||||++||+||+|+.++..+.+|+++++|++|+..++++++++.
T Consensus 161 tI~~p~~~~alSN~~~~~~~~~~~g~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~gv~v~v~~~~~~~~~~~~al~~ 240 (897)
T 2xdt_A 161 KIRREPRHLAISNMPLVKSVTVAEGLIEDHFDVTVKMSTYLVAFIISDFESVSKITKSGVKVSVYAVPDKINQADYALDA 240 (897)
T ss_dssp EEEECTTCEEEESSCEEEEEEEETTEEEEEECCCCSBCGGGCCEEEECCEEEEEECTTCCEEEEEECTTTGGGCHHHHHH
T ss_pred EEEEcCCceEecCCCccceEecCCCEEEEEEeCCCccchhheEEEEEcceeeccccCCCeeEEEEcCCChHHHHHHHHHH
Confidence 99999999999999988753 45678999999999999999999999999988656778999999999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHHhcCccC
Q 003860 240 AVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 319 (791)
Q Consensus 240 ~~~~l~~~e~~fg~~yP~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~Vt 319 (791)
+++++++|+++||+|||++|+|+|++|+|+.||||||||++|+|..+|+++..++...++.++.+||||+|||||||+||
T Consensus 241 ~~~~l~~~e~~fg~~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~~~~~~~~~~~~~~~viaHElAHqWFGnlVT 320 (897)
T 2xdt_A 241 AVTLLEFYEDYFSIPYPLPKQDLAAIPDFQSGAMENWGLTTYRESALLFDAEKSSASSKLGITMTVAHELAHQWFGNLVT 320 (897)
T ss_dssp HHHHHHHHHHHTTCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTTTEE
T ss_pred HHHHHHHHHHHhCCCCCccceeEEEeCCCcccchhcCCeeEEeeeeEeECCCCCcHHHHHHHHHHHHHHHHHHHcCCEec
Confidence 99999999999999999999999999999999999999999999999999998888888899999999999999999999
Q ss_pred ccccchhHHhhhHHHHHHHHHhhhhCCcchhHHHHHHHHHhhhhccccCCCCceeeecCCchhhhcccccccccchhHHH
Q 003860 320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (791)
Q Consensus 320 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (791)
|+||+|+|||||||+|++++++++.+|+|.++..|......++..|+..++||+..++.++.++...|+.++|.||++||
T Consensus 321 ~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~f~~~~~~a~~~D~~~~~~Pi~~~v~~p~~i~~~fd~i~Y~KGa~vl 400 (897)
T 2xdt_A 321 MEWWNDLWLNEGFAKFMEFVSVSVTHPELKVGDYFFGKCFDAMEVDALNSSHPVSTPVENPAQIREMFDDVSYDKGACIL 400 (897)
T ss_dssp ESSGGGTHHHHHHHHHHHHHHHHHHCGGGCGGGGHHHHHHHHHHHHTSTTCCCSSCCCCSHHHHHHTSSHHHHHHHHHHH
T ss_pred cCCcchhhhhHHHHHHHHHHHHHHhCCcchHHHHHHHHHHHHHHhhcccCCCCCEEeCCCHHHHHHhcchhhhhhHHHHH
Confidence 99999999999999999999999999999988888544457788899999999999999999999999999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhc-------------------c--------CCCHHHHHHHhc
Q 003860 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEG-------------------S--------GEPVNKLMNSWT 452 (791)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~-------------------s--------~~~l~~~~~~W~ 452 (791)
|||+..||++.|+++|+.|+++|+|++++++|||++|+++ + |.||++||++|+
T Consensus 401 ~mL~~~lG~e~F~~gl~~Yl~~~~~~~a~~~Dl~~~l~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~g~dl~~~~~~W~ 480 (897)
T 2xdt_A 401 NMLREYLSADAFKSGIVQYLQKHSYKNTKNEDLWDSMASICPTDGVKGMDGFCSRSQHSSSSSHWHQEGVDVKTMMNTWT 480 (897)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHTC----------------------------CCCHHHHHHHHH
T ss_pred HHHHHHhCHHHHHHHHHHHHHHhccCCCCHHHHHHHHHHHhhhccccccccccccccccccccccccCCCCHHHHHHHhh
Confidence 9999999999999999999999999999999999999996 5 899999999999
Q ss_pred cCCCcceEEEEEeCcEEEEEEEeeccCCCC---CCCeeEEEEEEEECcccceeeEEeecceeEEEecccccccccCCCCC
Q 003860 453 KQKGYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDN 529 (791)
Q Consensus 453 ~~~G~P~v~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 529 (791)
+|+|+|+++|++++++++|+|+||..++.. ....|+|||+|.++++.....+|+..++.++.++. .+
T Consensus 481 ~q~G~P~l~v~~~~~~~~l~Q~~f~~~~~~~~~~~~~w~iPi~~~~~~~~~~~~~~l~~~~~~~~~~~---------~~- 550 (897)
T 2xdt_A 481 LQKGFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV- 550 (897)
T ss_dssp SSCSEEEEEEEEETTEEEEEEEEECCC-----CCCCCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC-
T ss_pred cCCCceEEEEEEcCCEEEEEEEEeecCCCCCCCCCceEEEEEEEEeCCCCccceEEecCCceEEEccC---------CC-
Confidence 999999999999988999999999876532 24589999999876554445688887766666532 34
Q ss_pred CceEEEcCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHhccCChHHHHHHHhhcCCCCcHHHHH
Q 003860 530 GGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLS 607 (791)
Q Consensus 530 ~~~i~~N~~~~gyyrv~Yd~~~w~~l~~~L~~~--~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~ 607 (791)
+||++|.++.|||||+||+++|+.|+++|..+ .|++.+|||||+|+|+||++|.++++.+|+|++||++|++|+||.
T Consensus 551 -~~i~~N~~~~gyyrV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~~g~~~~~~~l~l~~~l~~E~~~~~w~ 629 (897)
T 2xdt_A 551 -EWIKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVF 629 (897)
T ss_dssp -SCEEESGGGCSSCEEEECTTHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHTTTSSCHHHHHHHHGGGGGCCCHHHHH
T ss_pred -ceEEECCCceEEEEEEcCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcCCCcHHHHH
Confidence 79999999999999999999999999999753 699999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhccChhHH---HHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Q 003860 608 NLITISYKIGRIAADARPELL---DYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKR 684 (791)
Q Consensus 608 ~~~~~l~~l~~~~~~~~~~~~---~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~A~~~ 684 (791)
++++.|..|.+++... +.+ ..|++|+++|+.+++++|||+. ++++.++++|..++.+||.+|+++|+++|+++
T Consensus 630 ~~~~~l~~l~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~lg~~~--~~~~~~~~lr~~~~~~ac~~g~~~c~~~a~~~ 705 (897)
T 2xdt_A 630 QGLNELIPMYKLMEKR--DMNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGY 705 (897)
T ss_dssp HHHHHHHHHHHHHHTS--SCHHHHHHHHHHHHHHHHHHHHTCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCC--hhhhHHHHHHHHHHHHHHHHHHHcCCCC--CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 9999999999998763 245 7899999999999999999987 67899999999999999999999999999999
Q ss_pred HHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhccC-
Q 003860 685 FHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSS- 763 (791)
Q Consensus 685 f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~~- 763 (791)
|++|++++..+.||||+|.+|||+++ |++++|++|+++|+++++++||..+|.||||++|+++|+++|++++++
T Consensus 706 f~~~~~~~~~~~i~~~lr~~vy~~~~-----g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~c~~~~~~l~~~L~~~~~~~ 780 (897)
T 2xdt_A 706 FRKWKESNGNLSLPVDVTLAVFAVGA-----QSTEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGD 780 (897)
T ss_dssp HHHHHHTTTCSCCCHHHHHHHHHHHT-----TSHHHHHHHHHHHTTCCCHHHHHHHHHHHTTCCCHHHHHHHHHHHHHCS
T ss_pred HHHHhcCCCcCCCCcchhhhEEEEec-----CCHHHHHHHHHHHHccCCHHHHHHHHHHhccCCCHHHHHHHHHHHhCCC
Confidence 99999875445799999999998763 799999999999999999999999999999999999999999999975
Q ss_pred cCccccceeeee-eccc--cHHHHHHHHHh
Q 003860 764 EVRSQDAVYGLA-VSIE--GRETAWKWLKV 790 (791)
Q Consensus 764 ~v~~qd~~~~~~-v~~~--g~~~~w~f~~~ 790 (791)
.||+||+..++. |+.| |++++|+|+++
T Consensus 781 ~i~~qd~~~~~~~v~~n~~g~~~~~~~~~~ 810 (897)
T 2xdt_A 781 KIKTQEFPQILTLIGRNPVGYPLAWQFLRK 810 (897)
T ss_dssp SSCGGGHHHHHHHHHTSTTTHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHcChhhHHHHHHHHHH
Confidence 599999999999 8777 99999999986
No 3
>4fke_A Aminopeptidase N; zinc aminopeptidase, hydrolase; HET: NAG; 1.85A {Sus scrofa} PDB: 4fkh_A* 4fkk_A* 4fkn_A* 4fkf_A* 4f5c_A* 4fyt_A* 4fyr_A* 4fys_A* 4fyq_A*
Probab=100.00 E-value=2.7e-148 Score=1339.15 Aligned_cols=768 Identities=34% Similarity=0.571 Sum_probs=688.7
Q ss_pred cCCCCcCCCCceeeeEEEEEEecCCC-----CeEEEEEEEEEEEEcCCCEEEEEeCCceEeEE----EEEeecCCCCCcc
Q 003860 4 FKGQPRLPKFAVPKRYDIRLTPDLTS-----CKFGGSVAIDVDVVGDTKFIVLNAADLTINNR----SVSFTNKVSSKAL 74 (791)
Q Consensus 4 ~~~~~rLp~~v~p~~Y~l~l~~d~~~-----~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v----~~~~~~~~~~~~~ 74 (791)
+-+++|||++|+|+||+|+|++|++. .+|+|+|+|++++.++++.|+||+++|+|+.. .+.+. ......
T Consensus 5 P~~~yRLP~~v~P~hY~l~L~~~l~~~~~~~~~f~G~v~I~~~~~~~t~~I~Lh~~~L~i~~~~~~~~~~~~--~~~~~~ 82 (909)
T 4fke_A 5 PWNRYRLPTTLLPDSYNVTLRPYLTPNADGLYIFKGKSIVRFLCQEPTDVIIIHSKKLNYTTQGHMVVLRGV--GDSQVP 82 (909)
T ss_dssp GGGSSSCCSSEEEEEEEEEEEECCSCCSSSCCEEEEEEEEEEEESSCEEEEEEECCSCEECCSSSSCEEEES--TTCCCC
T ss_pred CcccccCcCCCEeEEEEEEEEEcCcCCCCCCceEEEEEEEEEEEecCCCEEEEEcCCCEEEeeeeEEEEecC--CCccee
Confidence 44689999999999999999988643 58999999999999999999999999999763 33322 122233
Q ss_pred cCeeEEEecCCeEEEEEeCCCCCCc-eEEEEEEEEeeeCCCCcceEEeeeccCCeeeeeccccCCCCCCCceeeccCCCC
Q 003860 75 EPTKVELVEADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPA 153 (791)
Q Consensus 75 ~~~~~~~~~~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~ar~~fPc~DeP~ 153 (791)
......++...+.++|.++++|++| .|+|+|.|+|++++++.|||++.|.++|..+++++|||||++||+||||||||+
T Consensus 83 ~~~~~~~~~~~~~l~i~l~~~l~~g~~~~l~i~y~g~~~~~~~G~y~s~y~~~~~~~~~~~Tqfep~~AR~~FPc~DeP~ 162 (909)
T 4fke_A 83 EIDRTELVELTEYLVVHLKGSLQPGHMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPA 162 (909)
T ss_dssp CEEEEEEETTTTEEEEEEEEEECTTCEEEEEEEEEEECCSSSSEEEEEEEEETTEEEEEEEEECTTTTGGGTSCBCCSTT
T ss_pred cccceEEecCCcEEEEEcCCCcCCCCEEEEEEEEEEEECCCCeEEEEeeEEECCceEEEEEEcCcccCcCEEEEeCCccc
Confidence 4456778889999999999999999 899999999999999999999999988889999999999999999999999999
Q ss_pred CceEEEEEEEeCCCCeEeecCccccee----ecCCeEEEEEEcCCCCcceEEEEEEeeeeEeeccccCCeEEEEEEeCCc
Q 003860 154 CKATFKITLDVPSELVALSNMPVIDEK----VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGK 229 (791)
Q Consensus 154 ~ka~f~i~i~~p~~~~~~sn~~~~~~~----~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~ 229 (791)
+||+|+|+|++|++|+|+|||++.++. .++++++++|+.+||||||++||+||+|+.++..+.+|+++++|++|+.
T Consensus 163 ~KAtf~i~i~~p~~~~alSN~~~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~~~~~~g~~~~v~~~p~~ 242 (909)
T 4fke_A 163 MKATFNITLIHPNNLTALSNMPPKGSSTPLAEDPNWSVTEFETTPVMSTYLLAYIVSEFQSVNETAQNGVLIRIWARPNA 242 (909)
T ss_dssp SCBEEEEEEEEETTSEEEESSCBSSSCEECTTCTTEEEEEBCCCCSBCGGGCCEEEESCEEEEEECTTSCEEEEEECHHH
T ss_pred cceEEEEEEEECCCCEEEcCCcccccccceecCCCeEEEEEecCCCccceeeEEEecceEEEeeccCCCcEEEEEEecch
Confidence 999999999999999999999988653 2467999999999999999999999999998877778999999999986
Q ss_pred hh--hHHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHH
Q 003860 230 AN--QGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAH 307 (791)
Q Consensus 230 ~~--~~~~~l~~~~~~l~~~e~~fg~~yP~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaH 307 (791)
.+ +++++++.+++++++||++||+|||++|+|+|++|+|+.||||||||++|++..+|++++.++...+++++.+|||
T Consensus 243 ~~~~~~~~al~~~~~~l~~~e~~~~~~Yp~~k~d~v~vpdf~~gaMEn~glit~~e~~ll~d~~~s~~~~~~~~~~viaH 322 (909)
T 4fke_A 243 IAEGHGMYALNVTGPILNFFANHYNTSYPLPKSDQIALPDFNAGAMENWGLVTYRENALLFDPQSSSISNKERVVTVIAH 322 (909)
T ss_dssp HHTTTTHHHHHHHHHHHHHHHHHTTSCCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHCCCTTTCCHHHHHHHHHHHHH
T ss_pred hhhhhHHHHHHHHHHHHHHHHHhccCCCCCCcccEEEecCCCCcccccCcccccccceeecCcccCChHHHHHHHHHHHH
Confidence 54 4679999999999999999999999999999999999999999999999999999999998989999999999999
Q ss_pred HHHHHHhcCccCccccchhHHhhhHHHHHHHHHhhhhCCcchhHHHHHHHHH-hhhhccccCCCCceeee---cCCchhh
Q 003860 308 ELAHQWFGNLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVE---VNHTGEI 383 (791)
Q Consensus 308 ElaHqWfGn~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~---~~~~~~~ 383 (791)
|+|||||||+|||+||+|+|||||||+|++++++++.+|+|.++..|..... .++..|+..++||+..+ +.++.++
T Consensus 323 ElAHqWFGnlVT~~~W~dlWLnEGFAty~e~~~~~~~~~~~~~~~~f~~~~~~~~~~~d~~~~~~pi~~~~~~v~~~~~i 402 (909)
T 4fke_A 323 ELAHQWFGNLVTLAWWNDLWLNEGFASYVEYLGADHAEPTWNLKDLIVPGDVYRVMAVDALASSHPLTTPAEEVNTPAQI 402 (909)
T ss_dssp HHHTTTBTTTEEESSGGGHHHHHHHHHHHHHHHHHHHSTTSCGGGGHHHHTHHHHHHHHTSTTCCCSCCCGGGCCSHHHH
T ss_pred HHHhhhhcCeecccccCcceeehHHHHHHHHHHHHhccccccHHHhhhhhHHHHHHHHhhhcccCCccccccccCChhhH
Confidence 9999999999999999999999999999999999999999999988876655 67889999999999875 6678899
Q ss_pred hcccccccccchhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCC--------CHHHHHHHhccCC
Q 003860 384 DEIFDAISYRKGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE--------PVNKLMNSWTKQK 455 (791)
Q Consensus 384 ~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s~~--------~l~~~~~~W~~~~ 455 (791)
+..|+.++|.||++|||||+..||++.|+++|+.|+++|+|++++++|||++|++++|. +|+.||++|++|+
T Consensus 403 ~~~fd~i~Y~KGa~vL~mL~~~lG~e~F~~gl~~Yl~~~~~~na~~~Dl~~~l~~~s~~~~~~~~~~~v~~~~~~W~~q~ 482 (909)
T 4fke_A 403 SEMFDSISYSKGASVIRMLSNFLTEDLFKEGLASYLHAFAYQNTTYLDLWEHLQKAVDAQTSIRLPDTVRAIMDRWTLQM 482 (909)
T ss_dssp HTTSSHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHHTCSSCCCSSCHHHHHHHHHSSC
T ss_pred HhhhhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcccccccchhHHhHhhCccccC
Confidence 99999999999999999999999999999999999999999999999999999999864 5999999999999
Q ss_pred CcceEEEEEeCcEEEEEEEeeccCCCC-------CCCeeEEEEEEEECcccceeeEEeec-ceeEEEecccccccccCCC
Q 003860 456 GYPVISVKVKEEKLELEQSQFLSSGSP-------GDGQWIVPITLCCGSYDVCKNFLLYN-KSDSFDIKELLGCSISKEG 527 (791)
Q Consensus 456 G~P~v~v~~~~~~~~l~Q~rf~~~~~~-------~~~~w~iPl~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~ 527 (791)
|||+|+|+++.+. ++|+||...... .+..|+|||++.+.+..... .++.. ......+.. ...
T Consensus 483 G~Pvv~V~~~~~~--~~q~~~~~~~~~~~~~~~~~~~~w~IPl~~~~~~~~~~~-~~~~~~~~~~~~~~~-------~~~ 552 (909)
T 4fke_A 483 GFPVITVDTKTGN--ISQKHFLLDSESNVTRSSAFDYLWIVPISSIKNGVMQDH-YWLRDVSQAQNDLFK-------TAS 552 (909)
T ss_dssp SCEEEEEETTTTE--EEEEECCSCTTCCCCSCCTTTTCCCEEECEEETTEECCC-EEECSCSEEECGGGC-------CCT
T ss_pred CCcEEEEEeccCc--EEEEEEEeccCCCCCCCCCCCceEEEEEEEEeCCCccce-EEeeccccceeeecc-------CCC
Confidence 9999999887765 678888764421 12379999999876443222 33332 222222221 223
Q ss_pred CCCceEEEcCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHhccCChHHHHHHHhhcCCCCcHHH
Q 003860 528 DNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTV 605 (791)
Q Consensus 528 ~~~~~i~~N~~~~gyyrv~Yd~~~w~~l~~~L~~~--~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~ 605 (791)
+ +||++|.+++||||||||+++|.+|+++|+.+ .|++.+|+|||+|+|+||++|.++++.+|+++.||++|++|+|
T Consensus 553 ~--~wi~~N~~~~gyyRV~Yd~~~w~~l~~~L~~~~~~i~~~~Ra~li~D~~~la~ag~~~~~~~l~l~~~l~~E~~y~~ 630 (909)
T 4fke_A 553 D--DWVLLNVNVTGYFQVNYDEDNWRMIQHQLQTNLSVIPVINRAQVIYDSFNLATAHMVPVTLALDNTLFLNGEKEYMP 630 (909)
T ss_dssp T--CCEEESGGGCSSCEEEECHHHHHHHHHHHHHCGGGSCHHHHHHHHHHHHHHHHTTSSCHHHHHHTTGGGGGCCSHHH
T ss_pred C--CeEEECCCceEEEEEecCHHHHHHHHHHHHhCcccCCHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHccCccHHH
Confidence 4 89999999999999999999999999999864 7999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHcCCccC----CCCCHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 003860 606 LSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSK----PGESHLDALLRGEIFTALALLGHKETLNEA 681 (791)
Q Consensus 606 w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~----~~~~~~~~~lr~~i~~~ac~~g~~~c~~~A 681 (791)
|.++++.|..+..++.+ ++.+..|++|+++++.++++++|+... .++++.++.+|..++.+||..|+++|+++|
T Consensus 631 w~~~~~~l~~l~~~~~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~lr~~~l~~ac~~g~~~c~~~a 708 (909)
T 4fke_A 631 WQAALSSLSYFSLMFDR--SEVYGPMKKYLRKQVEPLFQHFETLTKNWTERPENLMDQYSEINAISTACSNGLPQCENLA 708 (909)
T ss_dssp HHHHHHHHHHHHHHHTT--STTHHHHHHHHHHHHHHHHHHHHHHTTTTTSCCSSHHHHHHHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcC--chHHHHHHHHHHHHHHHHHHHhhhhhcccccccccHHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 99999999999999876 458899999999999999999976432 357888999999999999999999999999
Q ss_pred HHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhc
Q 003860 682 SKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLL 761 (791)
Q Consensus 682 ~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l 761 (791)
+++|++|++++++..||||+|.+|||++ +++|++++|++++++|+++++.+||..++.||||++|+++|+++|++++
T Consensus 709 ~~~f~~~~~~~~~~~i~~dlr~~vy~~~---~~~g~~~~~~~l~~~~~~~~~~~ek~~ll~aL~~~~d~~~l~~~L~~~l 785 (909)
T 4fke_A 709 KTLFDQWMSDPENNPIHPNLRSTIYCNA---IAQGGQDQWDFAWGQLQQAQLVNEADKLRSALACSNEVWLLNRYLGYTL 785 (909)
T ss_dssp HHHHHHHHTCTTSCCSCTTTHHHHHHHH---HHHSCHHHHHHHHHHHHHCCSHHHHHHHHHHHTTCCCHHHHHHHHHHTT
T ss_pred HHHHHHHhhCCCCCcCCHHHHHHHHHHH---HHhCCHHHHHHHHHHHHccCCHHHHHHHHHHhCCCCCHHHHHHHHHHHh
Confidence 9999999988767789999999888875 4589999999999999999999999999999999999999999999999
Q ss_pred cC-cCccccceeeee-eccc--cHHHHHHHHHh
Q 003860 762 SS-EVRSQDAVYGLA-VSIE--GRETAWKWLKV 790 (791)
Q Consensus 762 ~~-~v~~qd~~~~~~-v~~~--g~~~~w~f~~~ 790 (791)
++ .||+||+..++. |+.| |++++|+|+++
T Consensus 786 ~~~~ir~qd~~~~~~~v~~n~~g~~~~~~f~~~ 818 (909)
T 4fke_A 786 NPDLIRKQDATSTINSIASNVIGQPLAWDFVQS 818 (909)
T ss_dssp CTTTSCGGGHHHHHHHHHHSTTHHHHHHHHHHH
T ss_pred CCCCCchhhHHHHHHHHhcChHHHHHHHHHHHH
Confidence 87 599999999999 8877 99999999986
No 4
>1z5h_A Tricorn protease interacting factor F3; zinc aminopeptidase, gluzicins, superhelix, hydrolase; 2.30A {Thermoplasma acidophilum} PDB: 1z1w_A 3q7j_A*
Probab=100.00 E-value=5.8e-135 Score=1203.02 Aligned_cols=704 Identities=33% Similarity=0.586 Sum_probs=638.1
Q ss_pred ceeeeEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeecCCCCCcccCeeEEEecCCeEEEEEeC
Q 003860 14 AVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVLEFA 93 (791)
Q Consensus 14 v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~l~ 93 (791)
|+|.||+|+|++++++.+|+|+|+| + ++++.|+||+.+|+|+++++++. +..+.++. +.++|.++
T Consensus 1 v~p~hY~l~l~~~~~~~~f~G~v~I--~--~~~~~i~L~~~~l~I~~v~~~g~---------~~~~~~~~--~~l~i~~~ 65 (780)
T 1z5h_A 1 MEVEKYDLTLDFDIQKRTFNGTETI--T--ADAGDIVLDAVGLQINWMKVNGR---------DTAFTYDG--QTVRAPGD 65 (780)
T ss_dssp CCEEEEEEEEEEETTTTEEEEEEEE--E--ECSSCEEEECSSCEEEEEEETTE---------ECCCEECS--SEEEECCC
T ss_pred CEEEEEEEEEEEECCCCEEEEEEEE--E--cCCCEEEEEccCCEEEEEEEece---------eccEEEEC--CEEEEEeC
Confidence 6899999999999999999999999 4 67899999999999999998541 22334433 47777765
Q ss_pred CCCCCceEEEEEEEEeeeCCCCcceEEeeeccCCeeeeeccccCCCCCCCceeeccCCCCCceEEEEEEEeCCCCeEeec
Q 003860 94 ETLPTGMGVLAIGFEGVLNDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSELVALSN 173 (791)
Q Consensus 94 ~~l~~g~~~l~i~y~g~~~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~ar~~fPc~DeP~~ka~f~i~i~~p~~~~~~sn 173 (791)
+|.++|+|.|+|.+++++.|||++.|. +++++|||||.+||+||||||+|.+||+|+|+|++|++|+|+||
T Consensus 66 ----~g~~~l~i~y~g~~~~~~~G~y~~~y~-----~~~~~Tq~ep~~AR~~fPc~DeP~~Katf~iti~~p~~~~~lSN 136 (780)
T 1z5h_A 66 ----SQPQKIEISFAGKVSDSLSGIYYAGRE-----NGMITTHFEATDARRMFPCVDHPAYKAVFAITVVIDKDYDAISN 136 (780)
T ss_dssp ----SSSEEEEEEEEEECBSSSSEEEEESST-----TCEEEEECTTTCGGGTSCBCCCTTSCBEEEEEEEECTTCEEEES
T ss_pred ----CccEEEEEEEEEEeCCCcccceecccc-----ceEEEEccccCChhheeecCCCcccccEEEEEEEECCCCEEEeC
Confidence 378999999999999999999999875 67889999999999999999999999999999999999999999
Q ss_pred CcccceeecCCeEEEEEEcCCCCcceEEEEEEeeeeEeeccccCCeEEEEEEeCCchhhHHHHHHHHHHHHHHHHHHhCC
Q 003860 174 MPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVAVKTLELYKEYFAV 253 (791)
Q Consensus 174 ~~~~~~~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~~~~~~l~~~e~~fg~ 253 (791)
|++.++ ..+++++++|+.++|||+|++||++|+|+.++.... |+++++|++|+ ++++++++.+++++++|+++||+
T Consensus 137 ~~~~~~-~~~g~~~~~f~~t~~mstYL~a~~vg~f~~~~~~~~-gv~~~v~~~~~--~~~~~al~~~~~~l~~~e~~fg~ 212 (780)
T 1z5h_A 137 MPPKRI-EVSERKVVEFQDTPRMSTYLLYVGIGKFRYEYEKYR-DIDLILASLKD--IRSKYPLDMARKSVEFYENYFGI 212 (780)
T ss_dssp SCEEEE-EESSSEEEEECCCCSBCGGGCCEEEECCEEEEEEET-TEEEEEEESSC--CCCSHHHHHHHHHHHHHHHHHSS
T ss_pred Cccccc-cCCCceEEEEecCCcccceEEEEEEeccEEEeeccC-CeeEEEEEccc--hhHHHHHHHHHHHHHHHHHHhCC
Confidence 998765 556788999999999999999999999999886544 89999999998 67799999999999999999999
Q ss_pred CCCCCCccEEEecCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHHhcCccCccccchhHHhhhHH
Q 003860 254 PYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTMEWWTHLWLNEGFA 333 (791)
Q Consensus 254 ~yP~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~Vt~~~w~d~WL~EGfA 333 (791)
|||++|+|+|++|+|+.|||||||+++|++..++++ +.++...++.++.+||||+|||||||+|||+||+|+|||||||
T Consensus 213 ~YP~~k~d~v~vpdf~~GaMEn~glit~~e~~ll~~-~~~~~~~~~~~~~viaHElaHqWfGnlVT~~~W~dlWLnEGfA 291 (780)
T 1z5h_A 213 PYALPKMHLISVPEFGAGAMENWGAITFREIYMDIA-ENSAVTVKRNSANVIAHEIAHQWFGDLVTMKWWNDLWLNESFA 291 (780)
T ss_dssp CCSSSEEEEEEETTCTTCEECCTTEEEEEHHHHSCC-TTSCHHHHHHHHHHHHHHHHHTTBTTTEEESSGGGHHHHHHHH
T ss_pred CCCCccCCEEEcCCCCCCcccccCeeEeecceEeec-CCCCHHHHHHHHHHHHHHHHHHHhCCccccCCcccccccHHHH
Confidence 999999999999999999999999999999989998 6677778888999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhCCcchhHHHHHHHHH-hhhhccccCCCCceeeecCCchhhhcccccccccchhHHHHHHHHhhCHHHHH
Q 003860 334 TWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVIRMLQNYLGAECFQ 412 (791)
Q Consensus 334 ~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~~~F~ 412 (791)
+|++++++++.+|+|.++.+|..... .++..|+..++||+..++.++.++...|+.++|.||++|+|||+..||++.|+
T Consensus 292 ~y~~~~~~~~~~~~~~~~~~f~~~~~~~al~~D~~~~~~pi~~~v~~~~~~~~~fd~i~Y~KGa~vl~mL~~~lG~e~F~ 371 (780)
T 1z5h_A 292 TFMSYKTMDTLFPEWSFWGDFFVSRTSGALRSDSLKNTHPIEVDVRDPDEISQIFDEISYGKGASILRMIEDYAGYEEFR 371 (780)
T ss_dssp HHHHHHHHHHHCTTTCHHHHHHHHTHHHHHHHTTSTTCCCSCCCCCSSCCTTTTSCHHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhccCCCCceecCCCHHHHHHhcchhhhhhHHHHHHHHHHHhCHHHHH
Confidence 99999999999999998888876554 67888999999999998888989999999999999999999999999999999
Q ss_pred HHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhccCCCcceEEEEEeCcEEEEEEEeeccCCCCCCCeeEEEEE
Q 003860 413 RSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKEEKLELEQSQFLSSGSPGDGQWIVPIT 492 (791)
Q Consensus 413 ~~l~~yl~~~~~~~~~~~df~~~l~~~s~~~l~~~~~~W~~~~G~P~v~v~~~~~~~~l~Q~rf~~~~~~~~~~w~iPl~ 492 (791)
++|+.|+++|+|++++++|||++|++++|.++++||++|++|+|+|+++|++++++++|+|+||..++ ..+..|+|||+
T Consensus 372 ~~l~~yl~~~~~~~~t~~Dl~~~l~~~sg~dl~~~~~~W~~~~G~P~l~v~~~~~~~~l~Q~~f~~~~-~~~~~w~iPi~ 450 (780)
T 1z5h_A 372 KGISKYLNDHKFGNAEGSDLWTAIEDVSGKPVKRVMEYWIKNPGYPVIKLKRNGRKITMYQTRFLLNG-EEEGRWPVPVN 450 (780)
T ss_dssp HHHHHHHHHHTTEEECHHHHHHHHHHHHCSCHHHHHHHHHHSCSCEEEEEEESSSEEEEEEEECCSSC-CEECCCCEEEE
T ss_pred HHHHHHHHHhccCCCCHHHHHHHHHHHhCCCHHHHHHHHHhCCCCceEEEEecCcEEEEEEEEecCCC-CCCceEEEEEE
Confidence 99999999999999999999999999999999999999999999999999998889999999998765 33458999999
Q ss_pred EEECcccceeeEEeecceeEEEecccccccccCCCCCCceEEEcCCceeEEEEEcCHHHHHHHHHHHHhcCCChhhHHHH
Q 003860 493 LCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI 572 (791)
Q Consensus 493 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~~~gyyrv~Yd~~~w~~l~~~L~~~~~~~~~r~~l 572 (791)
+ +.++. ...+ +..+ ++.++. . +||++|.++.|||||+||+++|..|+++| ..|++.+|+||
T Consensus 451 ~-~~~~~-~~~~-l~~~--~~~~~~----------~--~~i~~N~~~~gyyrv~Yd~~~~~~l~~~l--~~i~~~~Ra~l 511 (780)
T 1z5h_A 451 I-KKKDG-VERI-LLED--EASIEA----------D--GLIKINADSAGFYRVLYDDATFSDVMGHY--RDLSPLDRIGL 511 (780)
T ss_dssp E-EETTE-EEEE-EECS--SEEEEC----------T--TEEEESGGGCSSSEEECCHHHHHHHHHTG--GGCCHHHHHHH
T ss_pred E-cCCCc-eeee-ccCc--eEEccC----------C--ceEEEeCCCCEEEEEECCHHHHHHHHHHh--ccCCHHHHHHH
Confidence 9 44332 2334 5543 355542 2 69999999999999999999999999988 36899999999
Q ss_pred HHHHHHHHHhccCChHHHHHHHhhcCCCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHcCCccCC
Q 003860 573 LDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARPELLDYLKQFFISLFQNSAEKLGWDSKP 652 (791)
Q Consensus 573 i~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lg~~~~~ 652 (791)
|+|+|+||++|.++++.+|+++.||++|++|+||.++++.|..+..+ . ..|++|+++++.++++++| ..
T Consensus 512 i~D~~~l~~~g~~~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~~~~~--~------~~~~~~~~~l~~~~~~~l~--~~- 580 (780)
T 1z5h_A 512 VDDLFAFLLSGHIDPETYRQRIRNFFDDEDHNVITAIVGQMEYLRML--T------HAFDDDARAFCRSRMQFLT--GK- 580 (780)
T ss_dssp HHHHHHHHHHTSSCHHHHHHHHGGGTTCCCHHHHHHHHHHHHHHHTT--C------STTHHHHHHHHHHHHHHHT--TC-
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHhc--h------HHHHHHHHHHHHHHHHHcC--CC-
Confidence 99999999999999999999999999999999999999999888765 2 2488999999999999999 32
Q ss_pred CCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCC
Q 003860 653 GESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETD 732 (791)
Q Consensus 653 ~~~~~~~~lr~~i~~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~ 732 (791)
+++.+..+|..++++||..|+++|++ |+++|++| ..||||+|.+|||++++ +|++ |++++++|++++
T Consensus 581 -~~~~~~~~r~~~~~~a~~~~~~~~~~-a~~~f~~~------~~i~~~lr~~v~~~~~~---~g~~--~~~l~~~~~~~~ 647 (780)
T 1z5h_A 581 -QDENLKIALGRVSRLYVMVDESYAEE-MSKLFKDF------DSAEPEMRSSIATAYAL---VTGD--LKGLLEKFRSVD 647 (780)
T ss_dssp -CCHHHHHHHHHHHHHHHHHCHHHHHH-HHTTGGGG------GGSCHHHHHHHHHHHHH---HTCC--HHHHHHHHHSCC
T ss_pred -CChHHHHHHHHHHHHHHhcCCHHHHH-HHHHHHhc------CCCCHHHHHHHHHHHHH---cCcH--HHHHHHHHhcCC
Confidence 78899999999999999999999999 99999998 24999999999887654 6776 999999999999
Q ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHhccCcCccccceeeee-eccc--cHHHHHHHHHh
Q 003860 733 LSQEKTRILSSLASCPDVNIVLEVLNFLLSSEVRSQDAVYGLA-VSIE--GRETAWKWLKV 790 (791)
Q Consensus 733 ~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~~~v~~qd~~~~~~-v~~~--g~~~~w~f~~~ 790 (791)
+++||..++.||||++|+++++++|++++++.|++||...++. ++.| |++++|+|+++
T Consensus 648 ~~~~~~~~l~al~~~~~~~~~~~~l~~~~~~~i~~qd~~~~~~~~~~~~~~~~~~~~~~~~ 708 (780)
T 1z5h_A 648 RDEDRVRIISAFGKLKSNTDLSTVYGMVEKTEIKKQDMISFFSSALETLPGREFIFANLDR 708 (780)
T ss_dssp SHHHHHHHHHHHTTCCCHHHHHHHHHHHHTTSSCHHHHHHHHHHHTTSHHHHHHHHHTHHH
T ss_pred CHHHHHHHHHHhccCCCHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCcccHHHHHHHHHH
Confidence 9999999999999999999999999999987799999999998 8766 99999999985
No 5
>2gtq_A Aminopeptidase N; alanine aminopeptidase, M1 family peptidas PSI-2, structural genomics, protein structure initiative; 2.05A {Neisseria meningitidis}
Probab=100.00 E-value=5.9e-100 Score=906.14 Aligned_cols=733 Identities=18% Similarity=0.229 Sum_probs=586.8
Q ss_pred CCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeecCCCCCcccCeeEEEecCC
Q 003860 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEAD 85 (791)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~~ 85 (791)
.++|+|...+| ||+|++++++++.+++|+++|++. .+++.|+||+.+ +|.+|++++. . ..+..++
T Consensus 9 ~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~--~~~~~i~Ld~~~-~I~sv~v~g~---------~--~~~~~~~ 73 (867)
T 2gtq_A 9 KDYQTPAYHIL-KTDLHFDINEPQTVVKSRLTVEPQ--RVGEPLVLDGSA-KLLSVKINGA---------A--ADYVLEG 73 (867)
T ss_dssp GGCCCCSEEEE-EEEEEEEECSSCEEEEEEEEEEES--STTSCEEEECCS-EEEEEEETTE---------E--CCCEEET
T ss_pred cccCCCCCcee-EEEEEEEEECCcEEEEEEEEEEEe--CCCCEEEEecCC-CEEEEEECCe---------e--cceEeeC
Confidence 56888887776 899999999988888888777743 447889999999 9999998642 1 2333445
Q ss_pred eEEEEEeCCCCCCceEEEEEEEEeee--CCCCcceEEeeeccCCeeeeeccccCCCCCCCceeeccCCCCCceEEEEEEE
Q 003860 86 EILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLD 163 (791)
Q Consensus 86 ~~l~i~l~~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~ar~~fPc~DeP~~ka~f~i~i~ 163 (791)
+.++|. +|++|.++|+|.|++.. ++...|+|++. .+++|||||.+||+||||||+|++||+|+++|+
T Consensus 74 ~~L~I~---~lp~g~~~l~I~y~~~p~~~~~~~Gly~s~--------~~~~Tq~ep~~AR~~fPc~DeP~~katf~itIt 142 (867)
T 2gtq_A 74 ETLTIA---GVPSERFTVEVETEILPAENKSLMGLYASG--------GNLFTQCEPEGFRKITFYIDRPDVMSKFTTTIV 142 (867)
T ss_dssp TEEEES---CCCSSCEEEEEEEEECGGGCCSCSEEEEET--------TEEEEECTTTTGGGTSCBCCSTTCCBEEEEEEE
T ss_pred CEEEEE---ecCCCcEEEEEEEEEeccCCCCCcEEEEEC--------CEEEEeeccCCCceeeccCCCCCcceEEEEEEE
Confidence 677775 46568999999999864 34568999874 267899999999999999999999999999999
Q ss_pred eCCC-C-eEeecCcccceee-cCCeEEEEEEcCCCCcceEEEEEEeeeeEeecc--cc--CCeEEEEEEeCCchhhHHHH
Q 003860 164 VPSE-L-VALSNMPVIDEKV-DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TS--DGIKVRVYCQVGKANQGKFA 236 (791)
Q Consensus 164 ~p~~-~-~~~sn~~~~~~~~-~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~--~~--~~~~v~v~~~~~~~~~~~~~ 236 (791)
+|++ | +++|||+++++.. .+++++++|+.++|||+|++||++|+|..++.. +. .++++++|++|+..+.++++
T Consensus 143 ~p~~~y~~~lSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~a 222 (867)
T 2gtq_A 143 ADKKRYPVLLSNGNKIDGGEFSDGRHWVKWEDPFSKPSYLFALVAGDLAVTEDYFTTMSGRNVKIEFYTTEADKPKVGFA 222 (867)
T ss_dssp EETTTCCEEEESSEEEEEEECTTSEEEEEEECCSCBCGGGCCEEEECCEEEEEEEECTTSCEEEEEEEECTTTGGGCHHH
T ss_pred EccccceEEEeCCccccceeecCCeEEEEEEeCCCccccceeEEEecceEeeeceeccCCCceEEEEEeccccHHHHHHH
Confidence 9997 6 8999999887643 567889999999999999999999999988752 22 24899999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHHhcC
Q 003860 237 LNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 316 (791)
Q Consensus 237 l~~~~~~l~~~e~~fg~~yP~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn 316 (791)
++.+++++++||++||+|||++|+++|++|+|..||||||||++|++..++++++..+...++.+..+||||+|||||||
T Consensus 223 l~~~~~~l~~~e~~fG~pYP~~k~d~Vavpdf~~GaMEn~glitf~e~~ll~~~~~~~~~~~~~i~~vIaHElAHqWfGn 302 (867)
T 2gtq_A 223 VESLKNAMKWDETRFGLEYDLDIFMVVAVGDFNMGAMENKGLNIFNTKFVLADSRTATDTDFEGIESVVGHEYFHNWTGN 302 (867)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSEEEEEEESSCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCccccccCCceeecccccccCcccCcHHHHHHHHHHHHHHHHHHhcCc
Confidence 99999999999999999999999999999999999999999999999999999877777778889999999999999999
Q ss_pred ccCccccchhHHhhhHHHHHHHHHhhhhCCcc-hhHHHHHHHHHhhhhccccCCCCceeeecCCchhhhcccccccccch
Q 003860 317 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEW-KIWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKG 395 (791)
Q Consensus 317 ~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg 395 (791)
+|||+||+++|||||||+|++..+.....+.. ..+.........++..|+...+||+.. .++.+++..|+.++|.||
T Consensus 303 lVT~~~W~dlWLnEGfAty~e~~~~~~~~~~~~~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~KG 380 (867)
T 2gtq_A 303 RVTCRDWFQLSLKEGLTVFRDQEFSGDRASRAVRRIENIRLLRQHQFPEDAGPTAHPVRP--ASYEEMNNFYTMTVYEKG 380 (867)
T ss_dssp TBEESSGGGHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHSTTCCCSSC--SEESCGGGGCSHHHHHHH
T ss_pred EEEecccccccchHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHhhhhccCccCCCCcC--CChhhhhhhccchhhhHH
Confidence 99999999999999999999988887776531 111111111112466788888999864 245567888999999999
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhccCCCcceEEEEEe--Cc--EEEE
Q 003860 396 ASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVK--EE--KLEL 471 (791)
Q Consensus 396 ~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s~~~l~~~~~~W~~~~G~P~v~v~~~--~~--~~~l 471 (791)
++|+|||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|++.| ++|++|+|+|+++|+++ ++ +++|
T Consensus 381 a~vl~mL~~~lG~e~F~~glr~Yl~~~~~~~~t~~Df~~~l~~~sg~dl~~f-~~W~~q~G~P~l~v~~~~~~~~~~l~l 459 (867)
T 2gtq_A 381 AEVVRMYHTLLGEEGFQKGMKLYFQRHDGQAVTCDDFRAAMADANGINLDQF-ALWYSQAGTPVLEAEGRLKNNIFELTV 459 (867)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECHHHHHHHHHHHHTCCCGGG-GHHHHCCSCCEEEEEEEEETTEEEEEE
T ss_pred HHHHHHHHHHHCHHHHHHHHHHHHHHhCCCCCCHHHHHHHHHHHhCCCHHHH-HHHhcCCCCceEEEEEEecCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999999985 79999999999999985 34 4889
Q ss_pred EEEeeccCCCCCCCeeEEEEEEEECc--ccc-----------eeeEEeecceeEEEecccccccccCCCCCCceEEEcCC
Q 003860 472 EQSQFLSSGSPGDGQWIVPITLCCGS--YDV-----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVN 538 (791)
Q Consensus 472 ~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~-----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~ 538 (791)
+|+++...+......|+|||++...+ +.. ...++++.++.++.++.+ ... .|+.+|.+
T Consensus 460 ~Q~~~~~~~~~~~~~~~iPi~~~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-------~~~--p~~~l~r~ 530 (867)
T 2gtq_A 460 KQTVPPTPDMTDKQPMMIPVKVGLLNRNGEAVAFDYQGKRATEAVLLLTEAEQTFLLEGV-------TEA--VVPSLLRG 530 (867)
T ss_dssp EEECCCBTTBSCCCCCCEEEEEEEECTTCCBCCEECSSCEESCEEEEECSSEEEEEEBCC-------CSC--CEEEESTT
T ss_pred EEecCCCCCCCCCceEEEEEEEEEEcCCCcccccccccccccceEEEEcCCceEEEEeCC-------CCC--CceEecCC
Confidence 99998655544455899999997643 221 123567778888888742 123 68999999
Q ss_pred ceeEEEEEcCHHHHHHHHHHHHhcCCChhhHHHH---HHHHHHH-----HHhccC-C-hHHHHHHHhhcC-CCC-cHHHH
Q 003860 539 QTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGI---LDDHFAL-----CMARQQ-T-LTSLLTLMASYS-EET-EYTVL 606 (791)
Q Consensus 539 ~~gyyrv~Yd~~~w~~l~~~L~~~~~~~~~r~~l---i~D~~~l-----a~~g~l-~-~~~~l~l~~~l~-~E~-~~~~w 606 (791)
..+++||+|+-..+. +...+... -++.+|.+. +.|...+ +++|.. + +..+++++.++. +|. ++.+|
T Consensus 531 fs~~~~l~~~~~~~~-l~~l~~~~-~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~ 608 (867)
T 2gtq_A 531 FSAPVHLNYPYSDDD-LLLLLAHD-SDAFTRWEAAQTLYRRAVAANLATLSDGVELPKHEKLLAAVEKVISDDLLDNAFK 608 (867)
T ss_dssp CCSSCEEECCCCHHH-HHHHHHHC-SCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCHHHH
T ss_pred CCccEEEECCCCHHH-HHHHHhhC-CChhHHHHHHHHHHHHHHHHHHHHhhcCCCCCchHHHHHHHHHHhcCcCCCHHHH
Confidence 999999997654443 22333322 247888766 8888888 667766 7 889999998864 777 99999
Q ss_pred HHHHH--HHHHHHHHHhccChhH----HHHHHH-HHHHH---HHHHHHHc-----C-CccCCCCCHHHHHHHHHHHHHHH
Q 003860 607 SNLIT--ISYKIGRIAADARPEL----LDYLKQ-FFISL---FQNSAEKL-----G-WDSKPGESHLDALLRGEIFTALA 670 (791)
Q Consensus 607 ~~~~~--~l~~l~~~~~~~~~~~----~~~~~~-~~~~l---~~~~~~~l-----g-~~~~~~~~~~~~~lr~~i~~~ac 670 (791)
..++. .+..|...+..-+|+. ...+++ +...+ +.++|+++ | |+..+ ++...+.||..+++++|
T Consensus 609 a~~l~lp~~~~l~~~~~~~d~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~r~lr~~~l~~l~ 687 (867)
T 2gtq_A 609 ALLLGVPSEAELWDGAENIDPLRYHQAREALLDTLAVHFLPKWHELNRQAAKQENQSYEYSP-EAAGWRTLRNVCRAFVL 687 (867)
T ss_dssp HHHTCCCCHHHHTTTCSSBCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTCCSCCH-HHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCHHHHHhhcccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCCh-HHHHHHHHHHHHHHHHH
Confidence 99998 6777766433223443 233444 44445 88888877 7 88755 77788999999999999
Q ss_pred hcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCH
Q 003860 671 LLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDV 750 (791)
Q Consensus 671 ~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~ct~d~ 750 (791)
..| ++|++.|+++|++...+ .+..++.+| +++. ..+.++++.++.++++|+++....+|..++. ||++++
T Consensus 688 ~~~-~~~~~~a~~~~~~~a~n--mt~~~~al~--~l~~---~~~~~~~~~~~~f~~~~~~~~~~~~k~~~~~--a~~~~~ 757 (867)
T 2gtq_A 688 RAD-PAHIETVAEKYGEMAQN--MTHEWGILS--AVNG---NESDTRNRLLAQFADKFSDDALVMDKYFALV--GSSRRS 757 (867)
T ss_dssp HHC-TTHHHHHHHTHHHHCSS--HHHHHHHHH--HHTT---CCSHHHHHHHHHHHHHTTTCHHHHHHHHHHH--HHCCST
T ss_pred hcC-ccHHHHHHHHHHHhCCC--HhHHHHHHH--HHHh---cCcccHHHHHHHHHHHHcCCchHHHHHHHHH--hcCCCh
Confidence 999 99999999999966432 334555666 3332 2234567789999999999888888888888 688999
Q ss_pred HHHHHHHHHhccC--c-Cccccceeeee-eccc----------cHHHHHHHHH
Q 003860 751 NIVLEVLNFLLSS--E-VRSQDAVYGLA-VSIE----------GRETAWKWLK 789 (791)
Q Consensus 751 ~ll~~~L~~~l~~--~-v~~qd~~~~~~-v~~~----------g~~~~w~f~~ 789 (791)
+++++++.++.++ . .+++++..++. ++.| |....-+.+.
T Consensus 758 ~~~~~v~~l~~~~~f~~~npn~~r~l~~~~~~n~~~fh~~~g~gy~~~~~~~~ 810 (867)
T 2gtq_A 758 DTLQQVRTALQHPKFSLENPNKARSLIGSFSRNVPHFHAEDGSGYRFIADKVI 810 (867)
T ss_dssp THHHHHHHHTTSTTCCTTCHHHHHHHHHHHHTCHHHHTCTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHhhCcCCCcCCchHHHHHHHHHhhCccccCCCCCcHHHHHHHHHH
Confidence 9999999999997 3 67777776776 6443 5555555543
No 6
>3ebh_A PFA-M1, M1 family aminopeptidase; hydrolase, metal-binding, metalloprotease, P hydrolase inhibitor; HET: BES; 1.65A {Plasmodium falciparum} PDB: 3ebg_A* 3ebi_A* 3q43_A* 3q44_A* 3t8v_A*
Probab=100.00 E-value=1.7e-91 Score=824.02 Aligned_cols=736 Identities=19% Similarity=0.240 Sum_probs=526.8
Q ss_pred CCCceeeeEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeecCCCCCcccCeeEEEecCCeEEEE
Q 003860 11 PKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEADEILVL 90 (791)
Q Consensus 11 p~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~i 90 (791)
|......||+|++++++++..++|+++|++...++++.|+||+.+|+|.+|++++. .+.. ...+..+++.|+|
T Consensus 11 ~~~~~V~h~~L~l~ld~~~~~v~G~~~i~~~~~~~~~~l~LD~~~L~I~sV~vnG~------~l~~-~~~~~~~~~~L~I 83 (889)
T 3ebh_A 11 PSGFIINQVTLNINIHDQETIVRSVLDMDISKHNVGEDLVFDGVGLKINEISINNK------KLVE-GEEYTYDNEFLTI 83 (889)
T ss_dssp CCSEEEEEEEEEEEECSSCEEEEEEEEEEECTTCCSCCEEEECCSCEEEEEEETTE------ECCB-TTTEEECSSEEEE
T ss_pred CCCcEEEEEEEEEEEeCCCeEEEEEEEEEEecCCCCceEEEECCCCEEEEEEECCE------EcCc-ccceEecCCEEEE
Confidence 55688899999999999999999999999877666789999999999999999652 1110 0024556778999
Q ss_pred EeCCCCCCceEEEEEEEEeee--CCCCcceEEeeeccCCeeeeeccccCCCCCCCceeeccCCCCCceEEEEEEEeCCC-
Q 003860 91 EFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLDVPSE- 167 (791)
Q Consensus 91 ~l~~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~ar~~fPc~DeP~~ka~f~i~i~~p~~- 167 (791)
.++. ++++.++|+|.|+|.. ++.+.|||++.+ +++|||||.+||+||||||+|++||+|+++|++|++
T Consensus 84 ~l~~-l~~~~~~l~I~y~~~p~~~~~l~Gly~s~~--------~~~TQ~Ep~~AR~~fPC~DeP~~KAtf~itIt~p~~~ 154 (889)
T 3ebh_A 84 FSKF-VPKSKFAFSSEVIIHPETNYALTGLYKSKN--------IIVSQCEATGFRRITFFIDRPDMMAKYDVTVTADKEK 154 (889)
T ss_dssp CGGG-SCSSSEEEEEEEEECGGGCTTCSEEEEETT--------EEEEECTTTTGGGTSCBCCSTTCCEEEEEEEEEETTT
T ss_pred ecCC-CCCCcEEEEEEEEecCccCCCceeeEEECC--------eEEEcccCCCCCEEEEEcCCCCcceEEEEEEEEcccc
Confidence 8765 6546899999999985 346789998742 678999999999999999999999999999999997
Q ss_pred C-eEeecCccccee-ecCCeEEEEEEcCCCCcceEEEEEEeeeeEeecc--c---cCCeEEEEEEeCCchhhHHHHHHHH
Q 003860 168 L-VALSNMPVIDEK-VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--T---SDGIKVRVYCQVGKANQGKFALNVA 240 (791)
Q Consensus 168 ~-~~~sn~~~~~~~-~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~--~---~~~~~v~v~~~~~~~~~~~~~l~~~ 240 (791)
| +++|||+++++. ..+++++++|+.++|||+|++||+||+|+.++.. + ..++++++|++|+..+.++++++.+
T Consensus 155 ~~valSNg~l~~~~~~~~g~~~~~f~~t~pmstYLvA~~vG~f~~~~~~~~t~~~G~~v~l~vy~~p~~~~~~~~al~~~ 234 (889)
T 3ebh_A 155 YPVLLSNGDKVNEFEIPGGRHGARFNDPPLKPCYLFAVVAGDLKHLSATYITKYTKKKVELYVFSEEKYVSKLQWALECL 234 (889)
T ss_dssp CCEEEESSEEEEEEEETTTEEEEEEEEEEEECGGGCCEEEECEEEEEEEEECSSSCCEEEEEEEEEGGGGGGGHHHHHHH
T ss_pred CeEEEccCccccceecCCCeEEEEEecCCccchhheeeEEecceEEeeeeeecCCCCceEEEEEeccCcHHHHHHHHHHH
Confidence 8 579999988764 4677889999999999999999999999988743 1 2248899999999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHHhcCccCc
Q 003860 241 VKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVTM 320 (791)
Q Consensus 241 ~~~l~~~e~~fg~~yP~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~Vt~ 320 (791)
++++++||++||+|||++|+++|++|+|+.||||||||++|++..+|+++..++...++.+..+||||+|||||||+|||
T Consensus 235 ~~~l~~~e~~fG~pYP~~kyd~VavPdF~~GaMEN~GLvtf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHQWFGNlVT~ 314 (889)
T 3ebh_A 235 KKSMAFDEDYFGLEYDLSRLNLVAVSDFNVGAMENKGLNIFNANSLLASKKNSIDFSYARILTVVGHEYFHQYTGNRVTL 314 (889)
T ss_dssp HHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTSCTHHHHHHHHHHHHHHHTTTBTTTBEE
T ss_pred HHHHHHHHHHHCCCCCCCceEEEEeccccchhhcCCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhcCeeee
Confidence 99999999999999999999999999999999999999999999999988877777788899999999999999999999
Q ss_pred cccchhHHhhhHHHHHHHHHhhhhCCcch-hHHHHHHHHHhhhhccccCCCCceeeecCCchhhhcccccccccchhHHH
Q 003860 321 EWWTHLWLNEGFATWVSYLAADSLFPEWK-IWTQFLDECTEGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYRKGASVI 399 (791)
Q Consensus 321 ~~w~d~WL~EGfA~y~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg~~vl 399 (791)
+||+|+|||||||+|++.++.....+... ............+..|+...+||+.. .++.+++..|+.++|.||++||
T Consensus 315 ~~W~dlWLnEGFAtY~e~~~~~~~~~~~~~r~~~~~~lr~~~~~~D~~~~shPI~~--~~~~ei~~~f~~i~Y~KGa~vL 392 (889)
T 3ebh_A 315 RDWFQLTLKEGLTVHRENLFSEEMTKTVTTRLSHVDLLRSVQFLEDSSPLSHPIRP--ESYVSMENFYTTTVYDKGSEVM 392 (889)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHTSTTCCCSSC--SEESCGGGCCCHHHHHHHHHHH
T ss_pred cccccceeeHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHhhhhccCccCCCCCC--cchhhhhhhccchhhhHHHHHH
Confidence 99999999999999999888777655421 11111111113466788888899863 2345678899999999999999
Q ss_pred HHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhcc-------CCCHHHHHHHhccCCCcceEEEEEeC----c-
Q 003860 400 RMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGS-------GEPVNKLMNSWTKQKGYPVISVKVKE----E- 467 (791)
Q Consensus 400 ~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s-------~~~l~~~~~~W~~~~G~P~v~v~~~~----~- 467 (791)
|||+..||++.|+++|+.|+++|+|++++++|||+++++++ |.|++. |++|++|+|+|+++|+++. +
T Consensus 393 rML~~~lGde~F~~gLr~Yl~~~~~~natt~Df~~ale~as~~~~~~~g~dL~~-f~~Wl~q~G~P~l~V~~~~d~~~~~ 471 (889)
T 3ebh_A 393 RMYLTILGEEYYKKGFDIYIKKNDGNTATCEDFNYAMEQAYKMKKADNSANLNQ-YLLWFSQSGTPHVSFKYNYDAEKKQ 471 (889)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTSEECHHHHHHHHHHHHHHHHTCTTCCCTG-GGHHHHCCSCCEEEEEEEEETTTTE
T ss_pred HHHHHHhCHHHHHHHHHHHHHHcCCCCCCHHHHHHHHHHHhhhccCCCCCCHHH-HHHHhcCCCCceEEEEEeecCCCCE
Confidence 99999999999999999999999999999999999999999 999985 6899999999999999863 2
Q ss_pred -EEEEEEEeeccCCCCCCCeeEEEEEEEECc---ccc---eeeEEeecceeEEEecccccccccCCCCCCceEEEcCCce
Q 003860 468 -KLELEQSQFLSSGSPGDGQWIVPITLCCGS---YDV---CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQT 540 (791)
Q Consensus 468 -~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~---~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~~~ 540 (791)
+++|+|+++...++.....|+|||++...+ +.. ...+.++.+++++.++.+. .. .+..+|.+..
T Consensus 472 ~~ltl~Q~~~~~~~~~~~~~~~IPl~v~l~~~~~G~~~~~~~~l~l~~~~q~f~~~~~~-------~~--p~~sl~r~fs 542 (889)
T 3ebh_A 472 YSIHVNQYTKPDENQKEKKPLFIPISVGLINPENGKEMISQTTLELTKESDTFVFNNIA-------VK--PIPSLFRGFS 542 (889)
T ss_dssp EEEEEEEECCCCSSCSSCCCCCEEEEEEEECTTTCCBCSCCEEEEECSSEEEEEESCCC-------SC--CEEEESTTCC
T ss_pred EEEEEEEecCCCCCCCCCceEEEEEEEEEEeCCCCccccceeEEEecCCcEEEEEcCCC-------CC--CeEEEcCCCC
Confidence 688899887655555556899999997643 221 2346788888999997531 12 4778999999
Q ss_pred eEEEEEcC--HHHHHHHHHHHHhcCCChhhHHHHHHHH--------HHHHHhcc---------CCh-HHHHHHHhh-cCC
Q 003860 541 GFYRVKYD--KDLAARLGYAIEMKQLSETDRFGILDDH--------FALCMARQ---------QTL-TSLLTLMAS-YSE 599 (791)
Q Consensus 541 gyyrv~Yd--~~~w~~l~~~L~~~~~~~~~r~~li~D~--------~~la~~g~---------l~~-~~~l~l~~~-l~~ 599 (791)
+++|++|+ .+.+..|.+. .-+..+|..-...+ ..-...|. +.. ..+++.+.. |..
T Consensus 543 a~v~l~~~~~~~~l~~l~~~----d~d~~~r~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 618 (889)
T 3ebh_A 543 APVYIEDQLTDEERILLLKY----DSDAFVRYNSCTNIYMKQILMNYNEFLKAKNEKLESFQLTPVNAQFIDAIKYLLED 618 (889)
T ss_dssp SSSEEECCCCHHHHHHHHHH----CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSSCCCCCCCHHHHHHHHHHHTC
T ss_pred ceEEEeCCCCHHHHHHHHhh----CCChhHHHHHHHHHHHHHHHHHHHHhhcccccccccccccccCHHHHHHHHHHHcC
Confidence 99999976 5544444332 11122222111110 01011111 111 123333332 222
Q ss_pred C-CcHHHHHHHHH--HHHHHHHHHhccChhHHHHHHHHH--------HHHHHHHHHHcC------------CccCCCCCH
Q 003860 600 E-TEYTVLSNLIT--ISYKIGRIAADARPELLDYLKQFF--------ISLFQNSAEKLG------------WDSKPGESH 656 (791)
Q Consensus 600 E-~~~~~w~~~~~--~l~~l~~~~~~~~~~~~~~~~~~~--------~~l~~~~~~~lg------------~~~~~~~~~ 656 (791)
+ -|...-..++. ....|...+..-+|+.....++++ ...+..+|+++. +.. ..+..
T Consensus 619 ~~~~~~~~a~~l~lp~~~~~~~~~~~~d~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 697 (889)
T 3ebh_A 619 PHADAGFKSYIVSLPQDRYIINFVSNLDTDVLADTKEYIYKQIGDKLNDVYYKMFKSLEAKADDLTYFNDESHV-DFDQM 697 (889)
T ss_dssp TTSCHHHHHHHTSCCCHHHHGGGCTTBCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTTTCTTCC-CHHHH
T ss_pred CCCCHHHHHHHhcCCCHHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccCCCC-CHHHH
Confidence 1 12211111110 001111111111122211212221 122222333321 211 11233
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHH
Q 003860 657 LDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQE 736 (791)
Q Consensus 657 ~~~~lr~~i~~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~e 736 (791)
-.+.||..++.++|..+.+...+.|.+.|+. . ..--|-+.+.+++.. ...++..+..++++++....-+
T Consensus 698 ~~r~l~n~~l~~l~~~~~~~~~~~~~~~~~~--------a-nmtd~~~al~~~~~~--~~~~~~l~~f~~~~~~~~lv~d 766 (889)
T 3ebh_A 698 NMRTLRNTLLSLLSKAQYPNILNEIIEHSKS--------P-YPSNWLTSLSVSAYF--DKYFELYDKTYKLSKDDELLLQ 766 (889)
T ss_dssp HHHHHHHHHHHHHHHTTCTTHHHHHHHHTTC--------S-CHHHHHHHHHHGGGS--TTHHHHHHHHHHHHTTSHHHHH
T ss_pred HHHHHHHHHHHHHHhcCChhHHHHHHHHHhh--------c-ChhHHHHHHHHHhcC--hhHHHHHHHHHHHhCCCcchhh
Confidence 4589999999999999988888888777752 1 233444445555442 2234467777788877767778
Q ss_pred HHHHHHHhCCCCC-HHHHHHHHHHhccCcCccccceeeee-eccc----------cHHHHHHHHHh
Q 003860 737 KTRILSSLASCPD-VNIVLEVLNFLLSSEVRSQDAVYGLA-VSIE----------GRETAWKWLKV 790 (791)
Q Consensus 737 k~~ll~aL~ct~d-~~ll~~~L~~~l~~~v~~qd~~~~~~-v~~~----------g~~~~w~f~~~ 790 (791)
|.-.+.|.+...| -+.++++++.--=+.-.|..+..++. .++| |++..-+.+.+
T Consensus 767 kwf~~qa~~~~~~~~~~v~~l~~h~~f~~~npn~~r~l~g~f~~n~~~fh~~~g~gy~~~~~~~~~ 832 (889)
T 3ebh_A 767 EWLKTVSRSDRKDIYEILKKLENEVLKDSKNPNDIRAVYLPFTNNLRRFHDISGKGYKLIAEVITK 832 (889)
T ss_dssp HHHHHHHTCCCTTHHHHHHHHHHHTTTTCCCHHHHHHHHTGGGGCHHHHTCTTSHHHHHHHHHHHH
T ss_pred HhHHHhhCCCCcCHHHHHHHHhcCCCCCCCCCcHHHHHHHHHhcChhhccCCCCcHHHHHHHHHHH
Confidence 8888888655544 24444444432111123445555555 4433 66666666543
No 7
>3b34_A Aminopeptidase N; protease, hydrolase, thermolysin, phenylal membrane, metal-binding, metalloprotease; HET: PHE; 1.30A {Escherichia coli K12} PDB: 2hpt_A* 3b2p_A* 2hpo_A* 3b2x_A* 3b37_A* 3b3b_A* 3ked_A* 3qjx_A 3puu_A 2dq6_A 2dqm_A* 2zxg_A*
Probab=100.00 E-value=4e-90 Score=818.46 Aligned_cols=719 Identities=19% Similarity=0.244 Sum_probs=539.3
Q ss_pred CCCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEEcCCCEEEEEeCCceEeEEEEEeecCCCCCcccCeeEEEecCC
Q 003860 6 GQPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGDTKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVEAD 85 (791)
Q Consensus 6 ~~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~~~ 85 (791)
..+|+|...+| ||+|++++++.+.+++|+++|++... +++.|+||+.+|+|.+|++++. +.. .++.++
T Consensus 32 ~~y~~~~~~v~-~~~L~l~l~~~~~~v~g~~~i~~~~~-~~~~l~Ld~~~L~I~sV~v~G~---------~l~-~y~~~~ 99 (891)
T 3b34_A 32 HDYRAPDYQIT-DIDLTFDLDAQKTVVTAVSQAVRHGA-SDAPLRLNGEDLKLVSVHINDE---------PWT-AWKEEE 99 (891)
T ss_dssp GGCCCCSEEEE-EEEEEEECCSSCEEEEEEEEEEECSC-TTCCEEEECSSCEEEEEEETTE---------ECC-SEEEET
T ss_pred hhCCCCCceeE-EEEEEEEEECCceEEEEEEEEEEccC-CCCEEEEECCCCEEEEEEEcCE---------Ecc-eEEeeC
Confidence 45777776666 89999999999999999988887654 5678999999999999998642 111 344556
Q ss_pred eEEEEEeCCCCCCceEEEEEEEEeee--CCCCcceEEeeeccCCeeeeeccccCCCCCCCceeeccCCCCCceEEEEEEE
Q 003860 86 EILVLEFAETLPTGMGVLAIGFEGVL--NDKMKGFYRSSYELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKITLD 163 (791)
Q Consensus 86 ~~l~i~l~~~l~~g~~~l~i~y~g~~--~~~~~G~y~~~y~~~g~~~~~~~t~~ep~~ar~~fPc~DeP~~ka~f~i~i~ 163 (791)
+.|+|. +|+ +.++|+|.|+++. ++...|+|++. .+++|||||.+||+||||||+|++||+|+|+|+
T Consensus 100 ~~L~I~---~lp-~~~~l~I~y~~~p~~~~~l~Gly~s~--------~~~~Tq~Ep~~AR~~fPc~DeP~~kAtf~itI~ 167 (891)
T 3b34_A 100 GALVIS---NLP-ERFTLKIINEISPAANTALEGLYQSG--------DALCTQCEAEGFRHITYYLDRPDVLARFTTKII 167 (891)
T ss_dssp TEEEEC---SCC-SEEEEEEEEEECGGGCCSCCEEEEET--------TEEEEECTTTTGGGTSSBCCSTTCCEEEEEEEE
T ss_pred CEEEEE---eCC-CeEEEEEEEEEeecccCCCceEEEeC--------CEEEeccccCCCCccccCCCCcccceEEEEEEE
Confidence 788886 343 6899999999864 34567999864 267899999999999999999999999999999
Q ss_pred eCCC-C-eEeecCcccceee-cCCeEEEEEEcCCCCcceEEEEEEeeeeEeecc--cc--CCeEEEEEEeCCchhhHHHH
Q 003860 164 VPSE-L-VALSNMPVIDEKV-DGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDH--TS--DGIKVRVYCQVGKANQGKFA 236 (791)
Q Consensus 164 ~p~~-~-~~~sn~~~~~~~~-~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~--~~--~~~~v~v~~~~~~~~~~~~~ 236 (791)
+|++ | +++|||+++++.. .+++++++|+.++|||+|++||++|+|+.++.. +. +++++++|++|+..+.++++
T Consensus 168 ~p~~~y~~alSNg~l~~~~~~~~g~~~~~f~~t~pmstYL~A~~vG~f~~~~~~~~t~~g~~v~l~vy~~p~~~~~~~~a 247 (891)
T 3b34_A 168 ADKIKYPFLLSNGNRVAQGELENGRHWVQWQDPFPKPCYLFALVAGDFDVLRDTFTTRSGREVALELYVDRGNLDRAPWA 247 (891)
T ss_dssp EETTTCCEEEESSEEEEEEECSTTEEEEEEEEEEEECGGGCCEEEECCEEEEEEEECTTCCEEEEEEEECTTCGGGCHHH
T ss_pred eccccceEEEeCCccccceeecCCeEEEEEEeCCCccceeeEEEeccceEEeeeeeccCCCceEEEEEeccCcHHHHHHH
Confidence 9997 6 8999999887643 577889999999999999999999999988742 22 24899999999999999999
Q ss_pred HHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHHhcC
Q 003860 237 LNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGN 316 (791)
Q Consensus 237 l~~~~~~l~~~e~~fg~~yP~~kld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn 316 (791)
++.+++++++||++||+|||++|+++|++|+|..|||||||+++|++..+|+++...+...++.+..+||||+|||||||
T Consensus 248 l~~~~~~l~~~e~~fG~pYP~~k~diVavPdf~~GaMEn~GLitf~e~~lL~~~~~~t~~~~~~i~~vIAHElAHqWFGN 327 (891)
T 3b34_A 248 MTSLKNSMKWDEERFGLEYDLDIYMIVAVDFFNMGAMENKGLNIFNSKYVLARTDTATDKDYLDIERVIGHEYFHNWTGN 327 (891)
T ss_dssp HHHHHHHHHHHHHHHCCCCCSSEEEEEEESCCSSSEECCTTEEEEEGGGTCCCTTTCCHHHHHHHHHHHHHHHHTTTBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCcceeEEEcCCCCcCccccCceeEecccccccCcccCcHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999999999999998877777778889999999999999999
Q ss_pred ccCccccchhHHhhhHHHHHHHHHhhhhCCcchhHHHHHH--HHH-hhhhccccCCCCceeeecCCchhhhccccccccc
Q 003860 317 LVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLD--ECT-EGLRLDGLAESHPIEVEVNHTGEIDEIFDAISYR 393 (791)
Q Consensus 317 ~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~d~~~~~~pi~~~~~~~~~~~~~f~~i~Y~ 393 (791)
+|||+||+|+|||||||+|++..+.....+.. . .++.. ... ..+..|+...+||+.. .++.+++..|+.++|.
T Consensus 328 lVT~~~W~dlWLnEGFAtY~e~~~~~~~~~~~-~-~~~~~~~~l~~~~~~~D~~~~~~Pi~~--~~~~~i~~~f~~i~Y~ 403 (891)
T 3b34_A 328 RVTCRDWFQLSLKEGLTVFRDQEFSSDLGSRA-V-NRINNVRTMRGLQFAEDASPMAHPIRP--DMVIEMNNFYTLTVYE 403 (891)
T ss_dssp TEEESSGGGHHHHHHHHHHHHHHHHHHHSCHH-H-HHHHHHHHHHHTHHHHHTSTTCCCSSC--SEESCGGGGCCHHHHH
T ss_pred CCcccchhhceehHHHHHHHHHHHHHHHhCHH-H-HHHHHHHHHHHhhhhhhccccCCCCcc--ccccccccccccchhh
Confidence 99999999999999999999988887776532 1 11111 111 2356688888999864 2345678889999999
Q ss_pred chhHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHHHHHhccCCCcceEEEEEeC----c--
Q 003860 394 KGASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPVISVKVKE----E-- 467 (791)
Q Consensus 394 Kg~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s~~~l~~~~~~W~~~~G~P~v~v~~~~----~-- 467 (791)
||++|||||+..||++.|+++|+.|+++|+|++++++|||+++++++|.|++. |++|++|+|+|+++|+++. +
T Consensus 404 KGa~VLrML~~~lG~e~F~~gLr~Yl~~~~~~~att~Df~~ale~~sg~dL~~-f~~W~~q~G~P~l~V~~~~~~~~~~~ 482 (891)
T 3b34_A 404 KGAEVIRMIHTLLGEENFQKGMQLYFERHDGSAATCDDFVQAMEDASNVDLSH-FRRWYSQSGTPIVTVKDDYNPETEQY 482 (891)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHHCCCCTT-TTHHHHCCSCCEEEEEEEEETTTTEE
T ss_pred HHHHHHHHHHHHHCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhCCCHHH-HHHHHcCCCCceEEEEEEeecCCCEE
Confidence 99999999999999999999999999999999999999999999999999998 5799999999999998752 2
Q ss_pred EEEEEEEeeccCCCCCCCeeEEEEEEEECc--ccc----------eeeEEeecceeEEEecccccccccCCCCCCceEEE
Q 003860 468 KLELEQSQFLSSGSPGDGQWIVPITLCCGS--YDV----------CKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKL 535 (791)
Q Consensus 468 ~~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~--~~~----------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 535 (791)
+++|+|+|+...+......|+|||++...+ +.. ...++++.++.++.++.+ ... .|+.+
T Consensus 483 ~ltl~Q~~~~~~~~~~~~~~~iPi~v~l~~~~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~v-------~~~--P~~~l 553 (891)
T 3b34_A 483 TLTISQRTPATPDQAEKQPLHIPFAIELYDNEGKVIPLQKGGHPVNSVLNVTQAEQTFVFDNV-------YFQ--PVPAL 553 (891)
T ss_dssp EEEEEEECCCBTTBSCCCCCCEEEEEEEECTTSCBCCCEETTEECCSEEEECSSEEEEEECCC-------CSC--CEEEE
T ss_pred EEEEEEecCCCCCCCCCceEEEEEEEEEEcCCCCcccccccccccceEEEecCCcEEEEEccC-------CCC--CcEEE
Confidence 589999997654544456899999997643 221 124678888888888742 123 69999
Q ss_pred cCCceeEEEEEcCHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHH--------hcc-CC-hHHHHHHHhh-cCCCC-cH
Q 003860 536 NVNQTGFYRVKYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCM--------ARQ-QT-LTSLLTLMAS-YSEET-EY 603 (791)
Q Consensus 536 N~~~~gyyrv~Yd~~~w~~l~~~L~~~~~~~~~r~~li~D~~~la~--------~g~-l~-~~~~l~l~~~-l~~E~-~~ 603 (791)
|.+..|||||+||..+|..+.. +. ..-++.+|.+.++++..... .|. +. ...+++.+.. |.++. |.
T Consensus 554 ~~~~s~~~~v~~~~~~~~l~~~-l~-~d~d~~~R~~a~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 631 (891)
T 3b34_A 554 LCEFSAPVKLEYKWSDQQLTFL-MR-HARNDFSRWDAAQSLLATYIKLNVARHQQGQPLSLPVHVADAFRAVLLDEKIDP 631 (891)
T ss_dssp STTCCSSCEEECCCCHHHHHHH-HH-HCSSHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCCCHHHHHHHHHHHHCSSSCH
T ss_pred cCCCcceEEEeCCCCHHHHHHH-Hh-hCCChhHHHHHHHHHHHHHHHHHHHhhhcCCCcCccHHHHHHHHHHhcCCCcCH
Confidence 9999999999999988877653 33 23457888888888766543 221 12 2345665544 33332 32
Q ss_pred HHHHHH--HHHHHHHHHHHhccChhHHHHHHHHHHH--------HHHHHHHHcCCccCC---CCCHHHHHHHHHHHHHHH
Q 003860 604 TVLSNL--ITISYKIGRIAADARPELLDYLKQFFIS--------LFQNSAEKLGWDSKP---GESHLDALLRGEIFTALA 670 (791)
Q Consensus 604 ~~w~~~--~~~l~~l~~~~~~~~~~~~~~~~~~~~~--------l~~~~~~~lg~~~~~---~~~~~~~~lr~~i~~~ac 670 (791)
..-..+ +.....|...+..-+|+.....++.++. .+..+|+++- ...- .+..-.+.||..++.++|
T Consensus 632 ~~~a~~l~lp~~~~~~~~~~~~d~~~i~~~r~~~~~~la~~~~~~~~~~~~~~~-~~~~~~~~~~~~~r~l~n~~l~~l~ 710 (891)
T 3b34_A 632 ALAAEILTLPSVNEMAELFDIIDPIAIAEVREALTRTLATELADELLAIYNANY-QSEYRVEHEDIAKRTLRNACLRFLA 710 (891)
T ss_dssp HHHHHHTSCCCHHHHHTTCSSCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTC-CSSCCCSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCHHHHHHhcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-cCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 222211 1122334433333334443333334333 3455666653 2111 122334899999999999
Q ss_pred hcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCH
Q 003860 671 LLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDV 750 (791)
Q Consensus 671 ~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~ct~d~ 750 (791)
..+..+..+.|.+.|+.- + + ---|-+.+.+++..-....++..+..+++++.....-+|.-.+.|. +..+
T Consensus 711 ~~~~~~~~~~~~~~~~~a--~-n-----mtd~~~al~~~~~~~~~~~~~~l~~f~~~~~~~~lv~~kwf~~qa~--~~~~ 780 (891)
T 3b34_A 711 FGETHLADVLVSKQFHEA--N-N-----MTDALAALSAAVAAQLPCRDALMQEYDDKWHQNGLVMDKWFILQAT--SPAA 780 (891)
T ss_dssp TSCHHHHHHHHHHHHHHC--S-S-----HHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTTCHHHHHHHHHHHHT--CCCT
T ss_pred hCCCchHHHHHHHHHhhC--C-C-----hHHHHHHHHHHhccCcchHHHHHHHHHHHhccCcHHHHHHHHHHhC--CCCc
Confidence 988667778888888752 1 1 1122223333332111134566788888888666666777777764 4456
Q ss_pred HHHHHHHHHhccCc--C-ccccceeeee
Q 003860 751 NIVLEVLNFLLSSE--V-RSQDAVYGLA 775 (791)
Q Consensus 751 ~ll~~~L~~~l~~~--v-~~qd~~~~~~ 775 (791)
+.+.++-.+.-++. + .|..+..++.
T Consensus 781 ~~~~~v~~l~~h~~f~~~npn~~r~l~~ 808 (891)
T 3b34_A 781 NVLETVRGLLQHRSFTMSNPNRIRSLIG 808 (891)
T ss_dssp THHHHHHHHTTCTTCCTTCHHHHHHHHH
T ss_pred cHHHHHHHHhcCCCCCCCCCcHHHHHHH
Confidence 67777777665553 2 3444555555
No 8
>3cia_A Cold-active aminopeptidase; psychrohilic, hydrolase; 2.70A {Colwellia psychrerythraea}
Probab=100.00 E-value=4.5e-84 Score=748.06 Aligned_cols=526 Identities=18% Similarity=0.282 Sum_probs=418.1
Q ss_pred CCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEEcC-CCEEEEEeCCceEeEEEEEeecCCCCCcccCeeEEEec--
Q 003860 7 QPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELVE-- 83 (791)
Q Consensus 7 ~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~~-- 83 (791)
.+|+|..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|.+|.+.+..+. .++..+..+.
T Consensus 19 ~~~~p~~~~~~hy~l~l~~d~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~l~I~~v~v~~~~g~----~~~~~~~~~~~~ 94 (605)
T 3cia_A 19 TYANYDQVKATHVYLDLNVDFDKKSLSGFAELSLDWFTDNKAPLILDTRDLVIHRVMAKNSQGQ----WVKVNYDLAKRD 94 (605)
T ss_dssp CCCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECCSSCCCEEEBCSSEEEEEEEEECTTCC----EEEECEEEEEEC
T ss_pred cccCCCCceEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEEEcCCCC----ccceeEEecCcc
Confidence 479999999999999999999999999999999999876 789999999999999998320000 0122333332
Q ss_pred --CCeEEEEEeCCCCCCceEEEEEEEEeeeCCCCcceEEeee-ccCCeeeeeccccCCCCCCCceeeccCCCCCceEEEE
Q 003860 84 --ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKI 160 (791)
Q Consensus 84 --~~~~l~i~l~~~l~~g~~~l~i~y~g~~~~~~~G~y~~~y-~~~g~~~~~~~t~~ep~~ar~~fPc~DeP~~ka~f~i 160 (791)
.++.++|.++ ++.++|+|.|+|+++. .|++...+ ..+|..+++++|||||++||+||||||+|++||+|++
T Consensus 95 ~~~~~~l~i~l~----~~~~~l~i~y~~~~~~--~gl~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~katf~i 168 (605)
T 3cia_A 95 DVLGSKLTINTP----LNAKKVRVYYNSTEKA--TGLQWLSAEQTAGKEKPFLFSQNQAIHARSWIPIQDTPSVRVTYTA 168 (605)
T ss_dssp SSSCEEEEECCC----TTCSEEEEEEEECTTC--TTEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCCTTCCEEEEE
T ss_pred ccCCCeEEEEeC----CceEEEEEEEEEecCC--CceEEecccccCCCcccEEEecCcccChhhceecCCCcCceeEEEE
Confidence 3567888765 2789999999998654 45554332 2356778888999999999999999999999999999
Q ss_pred EEEeCCCCeEeecCcccceeecCCeEEEEEEcCCCCcceEEEEEEeeeeEeeccccCCeEEEEEEeCCchhhHHHHHHHH
Q 003860 161 TLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALNVA 240 (791)
Q Consensus 161 ~i~~p~~~~~~sn~~~~~~~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~~~ 240 (791)
+|++|++|+|+|||....+...++ +++|+.++|||+|++||++|+|+..+ .|+++++|++|+..+.++++++.+
T Consensus 169 ~i~~p~~~~alsng~~~~~~~~~~--~~~f~~t~pmstYl~a~~vg~f~~~~----~g~~~~v~~~p~~~~~~~~~~~~~ 242 (605)
T 3cia_A 169 RITTDKDLLAVMSANNEPGTERDG--DYFFSMPQAIPPYLIAIGVGDLEFKA----MSHQTGIYAESYILDAAVAEFDDT 242 (605)
T ss_dssp EEECCTTCEEEESSEEC----CCS--EEEEEEEEEECGGGCCEEEESCEEEE----SSSSEEEEECSTTHHHHHHHSTTH
T ss_pred EEEEcCCcEEEecCCccceecCCC--eEEEeeCCCccceeEEEEEeeeeEec----CCCeEEEEeccChHHHHHHHHHHH
Confidence 999999999999875433322333 68999999999999999999999876 267899999999998999999999
Q ss_pred HHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHHhcCccC
Q 003860 241 VKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNLVT 319 (791)
Q Consensus 241 ~~~l~~~e~~fg~~yP~~kld~v~~-p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~Vt 319 (791)
.+++++|+++|| |||++|+|+|++ |+|+.|||||||+ +|.+..++.++. ....+||||+|||||||+||
T Consensus 243 ~~~l~~~e~~fG-~YP~~k~d~v~~p~~f~~GgMEn~gl-tf~~~~ll~~~~--------~~~~viaHElaHqWfGnlVT 312 (605)
T 3cia_A 243 QAMIDKAEQMYG-KYRWGRYDLLMLPPSFPFGGMENPRL-SFITPTVVAGDK--------SLVNLIAHELAHSWSGNLVT 312 (605)
T ss_dssp HHHHHHHHHHHC-CCTTSCEEEEECCTTCSSSEECCTTE-EEECGGGCCSSS--------CSTHHHHHHHHHTTBTTTEE
T ss_pred HHHHHHHHHHhC-CCCCccccEEEECCccCCCcccCCcE-EEecchhccCcH--------HHHHHHHHHHHHHhhccccc
Confidence 999999999999 999999999999 5999999999997 566666666543 14579999999999999999
Q ss_pred ccccchhHHhhhHHHHHHHHHhhhhCCcchh--HHHHHHHHH-hhhhcccc-CCCCceeeecCCchhhhcccccccccch
Q 003860 320 MEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGL-AESHPIEVEVNHTGEIDEIFDAISYRKG 395 (791)
Q Consensus 320 ~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~-~~~~pi~~~~~~~~~~~~~f~~i~Y~Kg 395 (791)
|+||+|+|||||||+|++++++++.+|++.. ...+....+ ..+ +.+ ..+||+..++. ..+++..|+.++|.||
T Consensus 313 ~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~l--~~~~~~~~pl~~~~~-~~~~~~~f~~i~Y~KG 389 (605)
T 3cia_A 313 NESWRDLWLNEGFTSYVENRIMEAVFGTDRAVMEQALGAQDLNAEI--LELDASDTQLYIDLK-GRDPDDAFSGVPYVKG 389 (605)
T ss_dssp ESSTTSTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH--HHSCTTTTSSSCCCT-TCCTTTSCCSHHHHHH
T ss_pred cCcchHhHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHH--HhhccCCCCcccCCC-CCChhHhhCccchhHH
Confidence 9999999999999999999999999887532 111111111 122 444 56788766554 2455778999999999
Q ss_pred hHHHHHHHHhhCHHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCC----CHHH-HHHHhccCCCcceEEEEEeCcEEE
Q 003860 396 ASVIRMLQNYLGAECFQRSLASYIKKYACSNAKTEDLWAALEEGSGE----PVNK-LMNSWTKQKGYPVISVKVKEEKLE 470 (791)
Q Consensus 396 ~~vl~mL~~~lG~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s~~----~l~~-~~~~W~~~~G~P~v~v~~~~~~~~ 470 (791)
++||+||+..+|++.|+++|+.|+++|++++++++|||+++++++|. ++.. +|++|++|+|+|+++|+.+.+.+.
T Consensus 390 a~vl~mL~~~lG~e~F~~~lr~yl~~~~~~~~t~~df~~~l~~~~~~~~~~~l~~~~~~~W~~~~G~P~~~~~~~~~~~~ 469 (605)
T 3cia_A 390 QLFLMYLEEKFGRERFDAFVLEYFDSHAFQSLGTDNFVKYLKANLTDKYPNIVSDNEINEWIFKAGLPSYAPQPTSNAFK 469 (605)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHTTTTTSTTSSCHHHHHHHHHSSSCCSSSCCCCCHHHH
T ss_pred HHHHHHHHHHhChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhccccccccchhhHHHHhcCCCCCceeccCCchHHH
Confidence 99999999999999999999999999999999999999999999875 5655 799999999999988765431100
Q ss_pred EEEEeeccCCCCCCCeeEEEEEEEECcccceeeEEeecceeEEEecccccccccCCCCCCceEEEcCCceeEEEEEcCHH
Q 003860 471 LEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGWIKLNVNQTGFYRVKYDKD 550 (791)
Q Consensus 471 l~Q~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~N~~~~gyyrv~Yd~~ 550 (791)
+ .......|+..... . ..+.|++|+..
T Consensus 470 --~------------------------~~~l~~~w~~~~~~-------------------~--------~~~~~~~~~~~ 496 (605)
T 3cia_A 470 --V------------------------IDKQINQLVTDELT-------------------L--------EQLPTAQWTLH 496 (605)
T ss_dssp --H------------------------HHHHTCCTTTTSSC-------------------C--------SCSGGGGCCSH
T ss_pred --H------------------------HHHHHHHHHhcCCC-------------------c--------cccchhhCCHH
Confidence 0 00000011111000 0 11238999999
Q ss_pred HHHHHHHHHHhcCCChhhHHHHHHHHHHHHHhccCChHHHHHHHhhcCCCCcHHHHHHHHHHHHHHHH
Q 003860 551 LAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGR 618 (791)
Q Consensus 551 ~w~~l~~~L~~~~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~ 618 (791)
+|..++++|.+ .|+ .+|+++|||+|+|+.++. .++.++.++++.++.++.+|..+...|..+.+
T Consensus 497 ~~~~~l~~l~~-~l~-~~~~~~l~~~~~~~~~~n--~ei~~~~~~~~~~~~~~~~~~~~~~~l~~~gr 560 (605)
T 3cia_A 497 EWLHFINNLPV-DLD-HQRMVNLDKAFDLTNSSN--AEIAHAWYLLSVRADYKEVYPAMAKYLKSIGR 560 (605)
T ss_dssp HHHHHHHHSCS-CCT-TC-CHHHHHHHCCSSCSS--HHHHHHHHHHHHHHTCGGGHHHHHHHHHHCCC
T ss_pred HHHHHHHhcCc-cCC-HHHHHHHHHhhCCCcCCC--HHHHHHHHHHHHhcCChhHHHHHHHHHHHcCC
Confidence 99999999976 688 999999999999888764 46889999999899999999998877766543
No 9
>3u9w_A Leukotriene A-4 hydrolase; hydrolase-hydrolase inhibitor complex; HET: 28P; 1.25A {Homo sapiens} PDB: 3cho_A* 3chp_A* 3chq_A* 3chr_A* 3chs_A* 3fun_A* 1hs6_A* 2vj8_A* 3fh7_A* 3fh8_A* 3fhe_A* 3fts_A* 3ftu_A* 3ftv_A* 3ftw_A* 3ftx_A* 3fty_A* 3ftz_A* 3fu0_A* 3fu3_A* ...
Probab=100.00 E-value=2.7e-82 Score=733.59 Aligned_cols=448 Identities=25% Similarity=0.389 Sum_probs=384.5
Q ss_pred CCcCCCCc-eeeeEEEEEEecCCCCeEEEEEEEEEEEEcC-CCEEEEEeCCceEeEEEEEeecCCCCCccc-CeeEEEec
Q 003860 7 QPRLPKFA-VPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD-TKFIVLNAADLTINNRSVSFTNKVSSKALE-PTKVELVE 83 (791)
Q Consensus 7 ~~rLp~~v-~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~-~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~-~~~~~~~~ 83 (791)
++..|..+ ++.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|++|++++.. +. ......+.
T Consensus 6 s~a~p~~~~rv~Hy~L~l~vD~~~~~~~G~v~I~~~~~~~~~~~i~Ld~~~L~I~~V~v~g~~------~~~~~~~~~~~ 79 (608)
T 3u9w_A 6 SLASPASVCRTKHLHLRCSVDFTRRTLTGTAALTVQSQEDNLRSLVLDTKDLTIEKVVINGQE------VKYALGERQSY 79 (608)
T ss_dssp CCSCCTTTEEEEEEEEEEEEETTTTEEEEEEEEEEEECSTTEEEEEEEESSCEEEEEEETTEE------CCEEECCCCGG
T ss_pred cccCcccCCCceEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEECCCCEEEEEEECCEE------cceeccccccc
Confidence 46778776 7999999999999999999999999999887 4899999999999999986521 11 00111234
Q ss_pred CCeEEEEEeCCCCCCc-eEEEEEEEEeeeCCCCcceEEeeec-cCCeeeeeccccCCCCCCCceeeccCCCCCceEEEEE
Q 003860 84 ADEILVLEFAETLPTG-MGVLAIGFEGVLNDKMKGFYRSSYE-LNGEKKNMAVTQFEPADARRCFPCWDEPACKATFKIT 161 (791)
Q Consensus 84 ~~~~l~i~l~~~l~~g-~~~l~i~y~g~~~~~~~G~y~~~y~-~~g~~~~~~~t~~ep~~ar~~fPc~DeP~~ka~f~i~ 161 (791)
.++.++|.++.+|++| .++|+|.|+|+++.. |++...+. .+|+.+++++|||||.+||+||||||+|++||+|+++
T Consensus 80 ~~~~l~I~l~~~l~~g~~~~l~I~y~~~~~~~--~~~~~~~~~~~g~~~~~~~Tq~ep~~AR~~fPc~D~P~~Katf~i~ 157 (608)
T 3u9w_A 80 KGSPMEISLPIALSKNQEIVIEISFETSPKSS--ALQWLTPEQTSGKEHPYLFSQCQAIHCRAILPCQDTPSVKLTYTAE 157 (608)
T ss_dssp GCEEEEEEEEEEECTTCEEEEEEEEECCTTCT--TEEEECGGGSSSSSSCEEEECCTTTTGGGTSCBCCSTTCCEEEEEE
T ss_pred cCceEEEEcCCCCCCCCEEEEEEEEEEEcCCC--ceeeecccccCCCcceEEEEcccCCCCCEEEEecCccceeEEEEEE
Confidence 5678999999999999 999999999987654 45444443 3577788899999999999999999999999999999
Q ss_pred EEeCCCCeEeecCccccee---ecCCeEEEEEEcCCCCcceEEEEEEeeeeEeeccccCCeEEEEEEeCCchhhHHHHHH
Q 003860 162 LDVPSELVALSNMPVIDEK---VDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFALN 238 (791)
Q Consensus 162 i~~p~~~~~~sn~~~~~~~---~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l~ 238 (791)
|++|++|+|+|||++.++. .++++++++|..++|||+|++||+||+|+..+ .|+++++|+.|+..+.++++++
T Consensus 158 I~~p~~~~alsng~~~~~~~~~~~~~~~~~~f~~t~pmstYL~a~~vg~f~~~~----~~~~~~v~~~p~~~~~~~~~~~ 233 (608)
T 3u9w_A 158 VSVPKELVALMSAIRDGETPDPEDPSRKIYKFIQKVPIPCYLIALVVGALESRQ----IGPRTLVWSEKEQVEKSAYEFS 233 (608)
T ss_dssp EEEETTSEEEESSEEEEEEECTTCTTEEEEEEEEEEEECGGGCCEEEESCEEEE----EETTEEEEECHHHHHHHHHHTT
T ss_pred eeCCcceeeeeeccccceeeccCCCCeEEEEEEecCCcccEEEEEEEeeeeeEe----cCCceEEEeChhhHHHHHHHHH
Confidence 9999999999999887653 24568899999999999999999999998765 2677899999999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHHhcCc
Q 003860 239 VAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFGNL 317 (791)
Q Consensus 239 ~~~~~l~~~e~~fg~~yP~~kld~v~~-p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfGn~ 317 (791)
.+.+++++||++|| |||++++++|++ |+|+.||||||||+++++..++.+.. +..+||||+|||||||+
T Consensus 234 ~~~~~l~~~e~~~g-~Yp~~~~~~vv~~p~f~~GgMEn~gl~~~~~~~l~~~~~---------~~~viaHElAHqWfGnl 303 (608)
T 3u9w_A 234 ETESMLKIAEDLGG-PYVWGQYDLLVLPPSFPYGGMENPCLTFVTPTLLAGDKS---------LSNVIAHEISHSWTGNL 303 (608)
T ss_dssp THHHHHHHHHHHHC-CCCSSCCEEEECCTTCSSSEECCTTEEEECGGGCCSSST---------TTHHHHHHHHTTTBTTT
T ss_pred HHHHHHHhHHhcCC-CCCchhhceeeecccccchhhhcCcceeeeeeeecccch---------hHHHHHHHhhhhhhcCc
Confidence 99999999999999 999999999888 89999999999999999986554432 45689999999999999
Q ss_pred cCccccchhHHhhhHHHHHHHHHhhhhCCcchhHHHHHHHHH-hhhhccccCCCCceeeecCCchhh--hcccccccccc
Q 003860 318 VTMEWWTHLWLNEGFATWVSYLAADSLFPEWKIWTQFLDECT-EGLRLDGLAESHPIEVEVNHTGEI--DEIFDAISYRK 394 (791)
Q Consensus 318 Vt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~d~~~~~~pi~~~~~~~~~~--~~~f~~i~Y~K 394 (791)
||++||+|+|||||||+|++++++++++|++.....+..... .....|....+||+..++.+..++ +..|+.++|.|
T Consensus 304 VT~~~W~d~WLnEGfAty~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~f~~i~Y~K 383 (608)
T 3u9w_A 304 VTNKTWDHFWLNEGHTVYLERHICGRLFGEKFRHFNALGGWGELQNSVKTFGETHPFTKLVVDLTDIDPDVAYSSVPYEK 383 (608)
T ss_dssp EEESSGGGHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHCTTCGGGSSSCCCTTCCHHHHCSSHHHHH
T ss_pred CccccccchhHHHhHHHHHHHHHHHHHccchhhHHHHHHHHHHHHHHHhhhhccCCccccccccccCChhhcccHHHHhH
Confidence 999999999999999999999999999998766555444333 234457777889988777666554 45799999999
Q ss_pred hhHHHHHHHHhhC-HHHHHHHHHHHHHHhccCCCChHHHHHHHHhccCCCHHHH----HHHhccCCCcceEEEEEeC---
Q 003860 395 GASVIRMLQNYLG-AECFQRSLASYIKKYACSNAKTEDLWAALEEGSGEPVNKL----MNSWTKQKGYPVISVKVKE--- 466 (791)
Q Consensus 395 g~~vl~mL~~~lG-~~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s~~~l~~~----~~~W~~~~G~P~v~v~~~~--- 466 (791)
|+++||||+..|| ++.|+++||.|+++|+|++++++||++++++++|.+++.+ |++|++|+|+|+|+|+++.
T Consensus 384 Ga~vL~mL~~~lG~~~~F~~~lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~~~~~~~~~W~~~~G~P~v~v~~d~~~~ 463 (608)
T 3u9w_A 384 GFALLFYLEQLLGGPEIFLGFLKAYVEKFSYKSITTDDWKDFLYSYFKDKVDVLNQVDWNAWLYSPGLPPIKPNYDMTLT 463 (608)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTEEECHHHHHHHHHHHTGGGHHHHHTSCHHHHHHCCSSCSSCCCCCCTTT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHhccCCCCCHHHHHHHHHHHhccccchhhHHHHHHHhcCCCCCceeeeeccccc
Confidence 9999999999998 7889999999999999999999999999999999999888 9999999999999998764
Q ss_pred -cEEEEEEEee
Q 003860 467 -EKLELEQSQF 476 (791)
Q Consensus 467 -~~~~l~Q~rf 476 (791)
..+.++|+++
T Consensus 464 ~~~~~l~q~~~ 474 (608)
T 3u9w_A 464 NACIALSQRWI 474 (608)
T ss_dssp HHHHHHHHHHH
T ss_pred cceeeHHhHHh
Confidence 2466677544
No 10
>2xq0_A LTA-4 hydrolase, leukotriene A-4 hydrolase; HET: BES; 1.96A {Saccharomyces cerevisiae} PDB: 2xpz_A* 2xpy_A*
Probab=100.00 E-value=5.9e-82 Score=732.24 Aligned_cols=527 Identities=18% Similarity=0.285 Sum_probs=410.1
Q ss_pred CCcCCCCceeeeEEEEEEecCCCCeEEEEEEEEEEEEcC----CCEEEEEeCCceEeEEEEEeecCCCCCcccCeeEEEe
Q 003860 7 QPRLPKFAVPKRYDIRLTPDLTSCKFGGSVAIDVDVVGD----TKFIVLNAADLTINNRSVSFTNKVSSKALEPTKVELV 82 (791)
Q Consensus 7 ~~rLp~~v~p~~Y~l~l~~d~~~~~~~G~v~I~~~~~~~----~~~i~L~~~~l~i~~v~~~~~~~~~~~~~~~~~~~~~ 82 (791)
.+|+|..+.|.||+|+|++|+++.+|+|+++|++++.++ ++.|+||+++|+|++|.+++. ...+..+
T Consensus 21 ~~~~p~~~~~~hY~L~l~~d~~~~~~~G~v~I~~~~~~~~~~~~~~i~Ld~~~l~I~~v~v~g~---------~~~~~~~ 91 (632)
T 2xq0_A 21 TLSNYKDFAVLHTDLNLSVSFEKSAISGSVTFQLKKLHEGKNKSDELHLDTSYLDVQEVHIDGS---------KADFQIE 91 (632)
T ss_dssp CCSCGGGEEEEEEEEEEEEETTTTEEEEEEEEEEEECC---CCCCEEEEBCSSEEEEEEEETTE---------ECCEEEC
T ss_pred cccCCCceeEEEEEEEEEEeCCCCEEEEEEEEEEEECCCCCCcCcEEEEEccCCEEEEEEECCe---------ecceEEc
Confidence 479999999999999999999999999999999999877 899999999999999998531 1223333
Q ss_pred c----CCeEEEEEeCCCCCCceEEEEEEEEeeeCCCCcceEEeee-ccCCeeeeeccccCCCCCCCceeeccCCCCCceE
Q 003860 83 E----ADEILVLEFAETLPTGMGVLAIGFEGVLNDKMKGFYRSSY-ELNGEKKNMAVTQFEPADARRCFPCWDEPACKAT 157 (791)
Q Consensus 83 ~----~~~~l~i~l~~~l~~g~~~l~i~y~g~~~~~~~G~y~~~y-~~~g~~~~~~~t~~ep~~ar~~fPc~DeP~~ka~ 157 (791)
. .++.++|.++++ .+.++|+|.|+|+++.. |++.... ..+|+ +++++|||||.+||+||||||+|++||+
T Consensus 92 ~~~~~~~~~l~I~l~~~--g~~~~l~I~Y~g~~~~~--gl~~~~~~~~~g~-~~~~~Tq~ep~~AR~~fPc~D~P~~Kat 166 (632)
T 2xq0_A 92 QRKEPLGSRLVINNASC--NDNFTLNIQFRTTDKCT--ALQWLNSKQTKGG-KPYVFSQLEAIHARSLFPCFDTPSVKST 166 (632)
T ss_dssp CCBTTTBCCEEEECCCS--SSEEEEEEEEEECTTCS--SEEEECTTTSTTS-SCEEEECCTTTTGGGTSCBCCSTTCCEE
T ss_pred ccccccCcEEEEEecCC--CCEEEEEEEEeeecCcC--cceeecccccCCC-ceEEEeccccCCcceeeeecCCcccceE
Confidence 2 357889998876 33999999999997653 4443222 23455 7888999999999999999999999999
Q ss_pred EEEEEEeCCCCeEeecCcccceeecCCeEEEEEEcCCCCcceEEEEEEeeeeEeeccccCCeEEEEEEeCCchhhHHHHH
Q 003860 158 FKITLDVPSELVALSNMPVIDEKVDGNMKTVSYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQVGKANQGKFAL 237 (791)
Q Consensus 158 f~i~i~~p~~~~~~sn~~~~~~~~~~~~~~~~f~~t~~mstyl~a~~vg~f~~~~~~~~~~~~v~v~~~~~~~~~~~~~l 237 (791)
|+++|++| ++|++||.++.....++ .+++|+.++|||+|++||+||+|...+. |+++++|++|+..+.+++++
T Consensus 167 f~i~I~~p--~~vv~sg~~~~~~~~~~-~~~~F~~t~pmstYLva~~vg~f~~~~~----g~~~~v~~~p~~~~~~~~~~ 239 (632)
T 2xq0_A 167 FTASIESP--LPVVFSGIRIEDTSKDT-NIYRFEQKVPIPAYLIGIASGDLSSAPI----GPRSTVYTEPFRLKDCQWEF 239 (632)
T ss_dssp EEEEEECS--SCEEESSEECCCC-----CEEEEEEEEEECGGGCCEEESSCEEEEE----ETTEEEEECHHHHHHHHHHH
T ss_pred EEEEEEEc--hHHhccCccccceecCC-CeEEEEeCCccchhheeeeEecceeecc----CCeeEEEEccchHHHHHHHH
Confidence 99999999 99886664433322122 2789999999999999999999998762 56799999999888889999
Q ss_pred H-HHHHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHHhc
Q 003860 238 N-VAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQWFG 315 (791)
Q Consensus 238 ~-~~~~~l~~~e~~fg~~yP~~kld~v~~-p~~~~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqWfG 315 (791)
+ .+.+++++||++|| |||++|+|+|++ |+|+.|||||||++ |.+..++.++. ....+||||+||||||
T Consensus 240 ~~~~~~~l~~~e~~fG-pYP~~k~d~v~~pp~f~~GgMEn~glt-~~~~~ll~~~~--------~~~~viaHElAHqWfG 309 (632)
T 2xq0_A 240 ENDVEKFIQTAEKIIF-EYEWGTYDILVNVDSYPYGGMESPNMT-FATPTLLAHDR--------SNIDVIAHELAHSWSG 309 (632)
T ss_dssp TTTHHHHHHHHHHHSC-CCCSSCCCEEECCTTCCSSEECCTTCE-EECGGGCCSSS--------CSTHHHHHHHHHTTBT
T ss_pred HHHHHHHHHHHHHhcc-cCCcccccEEEECCCCCCCccccceEE-EeeceeccCch--------hHHHHHHHHHHHHHhc
Confidence 8 99999999999999 999999999999 59999999999985 55555665543 2467999999999999
Q ss_pred CccCccccchhHHhhhHHHHHHHHHhhhhCCcchh--HHHHHHHHH-hhhhccccCCCCc---eeeecCCchhhhccccc
Q 003860 316 NLVTMEWWTHLWLNEGFATWVSYLAADSLFPEWKI--WTQFLDECT-EGLRLDGLAESHP---IEVEVNHTGEIDEIFDA 389 (791)
Q Consensus 316 n~Vt~~~w~d~WL~EGfA~y~~~~~~~~~~~~~~~--~~~~~~~~~-~~~~~d~~~~~~p---i~~~~~~~~~~~~~f~~ 389 (791)
|+||++||+|+|||||||+|++++++++.+|++.. ...+..+.. .+ +|++..+|| +...+.++.+++..|+.
T Consensus 310 nlVT~~~W~dlWLnEGfAtY~e~~~~~~~~g~~~~~~~~~~~~~~l~~~--l~~~~~~~pl~~l~~~~~~~~~~~~~f~~ 387 (632)
T 2xq0_A 310 NLVTNCSWNHFWLNEGWTVYLERRIIGAIHGEPTRHFSALIGWSDLQNS--IDSMKDPERFSTLVQNLNDNTDPDDAFST 387 (632)
T ss_dssp TTEEESSGGGTHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH--HHTCSSHHHHTSSSCCCCSSSCGGGGCSS
T ss_pred CCCccCCcchhhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH--HHhcccCCCCcccccCCCCCCChHHhccc
Confidence 99999999999999999999999999999988642 111111111 22 245556678 43444334566778999
Q ss_pred ccccchhHHHHHHHHhhCH-HHHHHHHHHHHHHhccCCCChHHHHHHHHhccC---CCHHH-HHHHhccCCCcceEEEEE
Q 003860 390 ISYRKGASVIRMLQNYLGA-ECFQRSLASYIKKYACSNAKTEDLWAALEEGSG---EPVNK-LMNSWTKQKGYPVISVKV 464 (791)
Q Consensus 390 i~Y~Kg~~vl~mL~~~lG~-~~F~~~l~~yl~~~~~~~~~~~df~~~l~~~s~---~~l~~-~~~~W~~~~G~P~v~v~~ 464 (791)
++|.||++||+||+..||+ +.|+++|+.|+++|++++++++|||+++++++| .+++. +|++|++|+|+|+ +++.
T Consensus 388 i~Y~KGa~vL~mL~~~lG~~e~F~~~Lr~Yl~~~~~~~~tt~Df~~~l~~~~~~~~~~l~~~~~~~W~~~~G~P~-~~~~ 466 (632)
T 2xq0_A 388 VPYEKGFNLLFHLETILGGKAEFDPFIRHYFKKFAKKSLDTFQFLDTLYEFYPEKKEILDSVDWETWLYKPGMPP-RPHF 466 (632)
T ss_dssp HHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHTTTEEECHHHHHHHHHHHCGGGHHHHHTSCHHHHHHCCSCCC-CCCC
T ss_pred hhhHHHHHHHHHHHHHhCChHHHHHHHHHHHHHhCcCCCCHHHHHHHHHHHhhhccccccHHHHHHHhcCCCCCC-CcCC
Confidence 9999999999999999999 999999999999999999999999999999987 46776 7999999999999 7655
Q ss_pred eCcE----EEEEEEeeccCCCCCCCeeEEEEEEEECcccceeeEEeecceeEE--EecccccccccCCCCCCceEEEcCC
Q 003860 465 KEEK----LELEQSQFLSSGSPGDGQWIVPITLCCGSYDVCKNFLLYNKSDSF--DIKELLGCSISKEGDNGGWIKLNVN 538 (791)
Q Consensus 465 ~~~~----~~l~Q~rf~~~~~~~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~i~~N~~ 538 (791)
+.+. ..+.| ||....+. ... ..++ .++. . ++-
T Consensus 467 ~~~~~~~~~~l~~-~w~~~~~~--------------~~~----------~~~~~~~~~~----------~--d~~----- 504 (632)
T 2xq0_A 467 ITALADNVYQLAD-KWVEMAQH--------------LKT----------TEDFRSEFNA----------I--DIK----- 504 (632)
T ss_dssp CCHHHHHHHHHHH-HHHHHTTT--------------CCS----------HHHHHHHCCG----------G--GGT-----
T ss_pred CchHHHHHHHHHH-HHHhcccc--------------ccc----------ccccccCCCH----------H--HHh-----
Confidence 4310 01111 12110000 000 0000 0110 1 111
Q ss_pred ceeEEEEEcCHHHHHHHHHHHHhc------------CCChhhHHHHHHHHHH--HHHhccCChHHHHHHHhhcCCCCcHH
Q 003860 539 QTGFYRVKYDKDLAARLGYAIEMK------------QLSETDRFGILDDHFA--LCMARQQTLTSLLTLMASYSEETEYT 604 (791)
Q Consensus 539 ~~gyyrv~Yd~~~w~~l~~~L~~~------------~~~~~~r~~li~D~~~--la~~g~l~~~~~l~l~~~l~~E~~~~ 604 (791)
+|+...|..+.+.|..+ .++ .+|+++|+|+|+ |+.++ +.++.++.++++.++....
T Consensus 505 -------~~~~~~~~~fl~~l~~~~~~~~~~~~~~~~l~-~~~~~~l~~~~~~~~~~~~--n~ei~~~~~~~~~~~~~~~ 574 (632)
T 2xq0_A 505 -------DFNSNQLVLFLETLTQNGHSNKKPKDFDWAKF-PVASRALLDIYQDNIVKSQ--NAEVVFKMFKFQIFAKLQE 574 (632)
T ss_dssp -------TCCHHHHHHHHHHHHTTCSSTTSCSCCCGGGC-HHHHHHHHHHTCCCCCTCC--CHHHHHHHHHHHHHTTCGG
T ss_pred -------hCCHHHHHHHHHHHHhcccccccccccCCCCC-HHHHHHHHHHHhhhhccCc--CHHHHHHHHHHHHhcCChh
Confidence 67899999999999742 366 899999999998 65554 4588999999988889999
Q ss_pred HHHHHHHHHHHHHHH
Q 003860 605 VLSNLITISYKIGRI 619 (791)
Q Consensus 605 ~w~~~~~~l~~l~~~ 619 (791)
+|..+...|..+.++
T Consensus 575 ~~~~~~~~l~~~gr~ 589 (632)
T 2xq0_A 575 EYKHLADWLGTVGRM 589 (632)
T ss_dssp GHHHHHHHTTTCCCH
T ss_pred HHHHHHHHHHHcCCe
Confidence 999888776655443
No 11
>3rjo_A Endoplasmic reticulum aminopeptidase 1; ERAP1, hydrolase; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-60 Score=527.46 Aligned_cols=317 Identities=22% Similarity=0.372 Sum_probs=282.8
Q ss_pred CcceEEEEEeCcEEEEEEEeeccCCCC---CCCeeEEEEEEEECcccceeeEEeecceeEEEecccccccccCCCCCCce
Q 003860 456 GYPVISVKVKEEKLELEQSQFLSSGSP---GDGQWIVPITLCCGSYDVCKNFLLYNKSDSFDIKELLGCSISKEGDNGGW 532 (791)
Q Consensus 456 G~P~v~v~~~~~~~~l~Q~rf~~~~~~---~~~~w~iPl~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 532 (791)
|||+|+|++++++++|+|+||+.++.. .+..|+|||+|.+++++....+|++.++.++.++. .+ +|
T Consensus 1 GyPvvtV~~~~~~~~l~Q~RFl~~~~~~~~~~~~W~IPl~~~~~~~~~~~~~~l~~~~~~i~l~~---------~~--~w 69 (419)
T 3rjo_A 1 GFPLITITVRGRNVHMKQEHYMKGSDGAPDTGYLWHVPLTFITSKSDMVHRFLLKTKTDVLILPE---------EV--EW 69 (419)
T ss_dssp CEEEEEEEEETTEEEEEEEEEC----------CCCCEEEEEEESSCSSCEEEEECSSEEEEECSS---------CC--SC
T ss_pred CCCEEEEEECCCEEEEEEeeccCCCCCCCCCCeEEEEEEEEEeCCCCccceEEEecCceEEEcCC---------CC--ce
Confidence 899999999889999999999986643 23589999999987655445678887766766642 34 79
Q ss_pred EEEcCCceeEEEEEcCHHHHHHHHHHHHhc--CCChhhHHHHHHHHHHHHHhccCChHHHHHHHhhcCCCCcHHHHHHHH
Q 003860 533 IKLNVNQTGFYRVKYDKDLAARLGYAIEMK--QLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLI 610 (791)
Q Consensus 533 i~~N~~~~gyyrv~Yd~~~w~~l~~~L~~~--~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~ 610 (791)
|++|.+++||||||||+++|++|+++|..+ .||+.||+|||+|+|+||++|+++++.+|+|++||++|++|+||.+++
T Consensus 70 i~~N~~~~GyYRVnYd~~~w~~L~~~L~~~~~~i~~~dRa~LidD~~~La~ag~~~~~~~l~l~~yL~~E~~y~~w~~~~ 149 (419)
T 3rjo_A 70 IKFNVGMNGYYIVHYEDDGWDSLTGLLKGTHTAVSSNDRASLINNAFQLVSIGKLSIEKALDLSLYLKHETEIMPVFQGL 149 (419)
T ss_dssp EEEEESSSSCCEEECHHHHHHHHHHHHHHHGGGSCHHHHHHHHHHHHHHHHHTSSCHHHHHHHHGGGGGCCSHHHHHHHH
T ss_pred EEEeCCccceEEEEeCHHHHHHHHHHHhhCCccCCHhHHHHHHHHHHHHHHcCCCCHHHHHHHHHHhcccchHHHHHHHH
Confidence 999999999999999999999999999754 899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhccC-hhHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhh
Q 003860 611 TISYKIGRIAADAR-PELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFL 689 (791)
Q Consensus 611 ~~l~~l~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~A~~~f~~~~ 689 (791)
+.|..|.+++...+ ++.+..|++|+++++.|+++++||++ ++++.+.++|..++++||.+|+++|+++|+++|++|+
T Consensus 150 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~lgw~~--~~~~~~~~lR~~~l~~ac~~g~~~c~~~A~~~f~~~~ 227 (419)
T 3rjo_A 150 NELIPMYKLMEKRDMNEVETQFKAFLIRLLRDLIDKQTWTD--EGSVSERMLRSQLLLLACVHNYQPCVQRAEGYFRKWK 227 (419)
T ss_dssp HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHCCSSC--CSCHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHcCCCC--CchHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 99999999986432 56789999999999999999999984 5889999999999999999999999999999999999
Q ss_pred cCCCCCCCCchhhhHhhheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhccCc-Cccc
Q 003860 690 ADRTTPLLPPDIRKAAYVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSSE-VRSQ 768 (791)
Q Consensus 690 ~~~~~~~i~~~lr~~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~~~-v~~q 768 (791)
+++....||||+|.+|||++++ + +++|++++++|+++++++||..++.||||++|+++|+++|++++++. ||+|
T Consensus 228 ~~~~~~~i~~dlr~~Vy~~~~~---~--~~~~~~l~~~y~~s~~~~ek~~ll~aL~~s~d~~ll~~~L~~~l~~~~ir~q 302 (419)
T 3rjo_A 228 ESNGNLSLPVDVTLAVFAVGAQ---S--TEGWDFLYSKYQFSLSSTEKSQIEFALCRTQNKEKLQWLLDESFKGDKIKTQ 302 (419)
T ss_dssp HTTTCSCCCGGGHHHHHHHHTT---S--HHHHHHHHHHHHHCCCHHHHHHHHHHHTTCSCHHHHHHHHHHHHHTSSSCGG
T ss_pred hCCCCCCCCCCcceeEEeeeeC---C--HHHHHHHHHHHhcCCCHHHHHHHHHHcCCCCCHHHHHHHHHHHhCCCCCchh
Confidence 8744347999999999998654 3 88999999999999999999999999999999999999999999886 6999
Q ss_pred cceeeee-eccc--cHHHHHHHHHh
Q 003860 769 DAVYGLA-VSIE--GRETAWKWLKV 790 (791)
Q Consensus 769 d~~~~~~-v~~~--g~~~~w~f~~~ 790 (791)
|+..++. |+.| |++++|+|+++
T Consensus 303 D~~~~~~~v~~n~~g~~~aw~fl~~ 327 (419)
T 3rjo_A 303 EFPQILTLIGRNPVGYPLAWQFLRK 327 (419)
T ss_dssp GHHHHHHHHHTSTTTHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcchHHHHHHHHHH
Confidence 9999999 8887 99999999985
No 12
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=99.96 E-value=8.9e-29 Score=282.37 Aligned_cols=298 Identities=14% Similarity=0.146 Sum_probs=203.6
Q ss_pred CceEEEEEEEeCCC---CeEeecCcccceeecCCeEEE---EEEcCCCCcceEEEEEEeeeeEeeccccCCeEEEEEEeC
Q 003860 154 CKATFKITLDVPSE---LVALSNMPVIDEKVDGNMKTV---SYQESPIMSTYLVAVVIGLFDYVEDHTSDGIKVRVYCQV 227 (791)
Q Consensus 154 ~ka~f~i~i~~p~~---~~~~sn~~~~~~~~~~~~~~~---~f~~t~~mstyl~a~~vg~f~~~~~~~~~~~~v~v~~~~ 227 (791)
...+++++|..|++ |.+.+.++....... +..++ .|..-..-| +.+|+|...+ .+..|+++++...+
T Consensus 119 ~~~p~~~~i~~P~~~~~W~vaT~L~~~~~~~~-~~~~f~a~~yd~LvDsP-----v~~G~~~~~~-~~~~g~p~~l~v~~ 191 (597)
T 4fgm_A 119 TDLPCELHLHAPPEAPLWKVATGMPRKSGQPH-SWGCFRADNYDALIDYP-----FLIGDLTIEE-FIAHGIKHSLVLSG 191 (597)
T ss_dssp TTSCEEEEECCCTTCTTCEEEESSCBCSSCTT-SSEEEEESSHHHHTTCC-----EEEESCEEEE-EEETTEEEEEEEES
T ss_pred cCCcEEEEEECCCCCCcceEEecCCccCCCCC-cceEEEcCCHHHHhcch-----hcccCcEEEE-eccCCeEEEEEEEc
Confidence 34678999999999 999888876543211 22222 122211111 4678998776 34568888876554
Q ss_pred CchhhHHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEe-cCCCCcccccccce--eeecccccccCCCchhHHHHHHHHH
Q 003860 228 GKANQGKFALNVAVKTLELYKEYFAVPYSLPKLDMIAI-PDFAAGAMENYGLV--TYRETALLYDDQHSAAANKQRVATV 304 (791)
Q Consensus 228 ~~~~~~~~~l~~~~~~l~~~e~~fg~~yP~~kld~v~~-p~~~~g~mE~~gli--~~~e~~ll~~~~~~~~~~~~~~~~~ 304 (791)
......+..+..+++++++++++|| |||++++++++. ++..+|||||.+.. ++++..+.......+.........+
T Consensus 192 ~~~~d~~~~~~~~~~~~~~~~~~fG-~yP~~~Y~fl~~~~~~~~GgmEh~~st~l~~~~~~l~~~~~~~~~~~~~~~~~l 270 (597)
T 4fgm_A 192 RHYADTSRITADLAKICETQISLFE-EAPFQSYTFLTMVVGNGFGGLEHRNSTALLCSRKDLISAHQYEMNDNYQTFLSL 270 (597)
T ss_dssp SCCCCHHHHHHHHHHHHHHHHHHHT-SCSCSEEEEEEEEESSCCEEEECSSEEEEEEEGGGSCCTTCCSCCHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHhC-CCCCCceEEEEEccCCCCcccccCCceEEEeCchhccccccccchhhhhchhhh
Confidence 4434568888999999999999999 999999999864 45688999998864 4565533322221233455678899
Q ss_pred HHHHHHHHHhcCccCc-----------cccchhHHhhhHHHHHHHHHhhhhCC-cchhHHHHHHHHHhhhhccccCCCCc
Q 003860 305 VAHELAHQWFGNLVTM-----------EWWTHLWLNEGFATWVSYLAADSLFP-EWKIWTQFLDECTEGLRLDGLAESHP 372 (791)
Q Consensus 305 iaHElaHqWfGn~Vt~-----------~~w~d~WL~EGfA~y~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~~~p 372 (791)
++||++||||||.|++ +||+++||+||||+|++.++..+... ..+.+...+......+........+|
T Consensus 271 iaHE~~H~W~g~~i~p~~~~~~d~~~~~~~~~lWl~EG~t~Y~~~l~~~r~G~~~~~~~~~~l~~~i~~~~~~~gr~~~s 350 (597)
T 4fgm_A 271 CCHEYFHSWNIKTLKPKAFLPYQLEKESYTEQLWFYEGMTSYFDDYLLHTSGIIDEKRYLKLLGDTLSRVERGAGQYQQS 350 (597)
T ss_dssp HHHHHHHTTBTTTBCBGGGSSCCCSSCCCCSTHHHHTHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHSGGGGTCC
T ss_pred HhhhhheeecccccccccccccccccccccccchhhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHhhcCCCccccC
Confidence 9999999999988875 45699999999999999988765421 11111111222222222221122223
Q ss_pred eeeec-------CCchhhhcccccccccchhHHHHHHHHhhCH-----HHHHHHHHHHHHHhcc--CCCChHHHHHHHHh
Q 003860 373 IEVEV-------NHTGEIDEIFDAISYRKGASVIRMLQNYLGA-----ECFQRSLASYIKKYAC--SNAKTEDLWAALEE 438 (791)
Q Consensus 373 i~~~~-------~~~~~~~~~f~~i~Y~Kg~~vl~mL~~~lG~-----~~F~~~l~~yl~~~~~--~~~~~~df~~~l~~ 438 (791)
+.... ..+++....+....|.||+++++||+..|++ +.|+++||.|+++|.. ++++++||.+++++
T Consensus 351 l~~ss~~aw~~~yr~~~n~~n~~~s~Y~KGalv~~~LD~~lR~~s~g~~sldd~mr~l~~~~~~~~~~~t~~d~~~~~e~ 430 (597)
T 4fgm_A 351 VTESSFLAWTKFYQQNENAPNSIVSYYAKGALIALSLDLMLRLQSDHKLTLARVMKELWHEFGKTSIGTADDTVINWLNQ 430 (597)
T ss_dssp HHHHHHTCCCCCTTCCTTHHHHCCCTTHHHHHHHHHHHHHHHHHTTTSCCHHHHHHHHHHHHTTTTCCBCTTHHHHHHHT
T ss_pred hHHcCchhhhccccCCcccCCcccccchHHHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHhCcCCCCCCHHHHHHHHHH
Confidence 32110 0011111112234699999999999888865 4899999999999874 68999999999999
Q ss_pred ccCCCHHHHHHHhccCCCcce
Q 003860 439 GSGEPVNKLMNSWTKQKGYPV 459 (791)
Q Consensus 439 ~s~~~l~~~~~~W~~~~G~P~ 459 (791)
++|.++..||++|+++++.|-
T Consensus 431 ~sG~dl~~ff~~~l~~t~~~p 451 (597)
T 4fgm_A 431 YPGIDISDFLKDALYNKESLS 451 (597)
T ss_dssp STTCCCHHHHHHHHHSCSCCC
T ss_pred hcCcCHHHHHHHHHhCCCCcc
Confidence 999999999999999998753
No 13
>1bqb_A Protein (aureolysin); hydrolase, metalloproteinase; 1.72A {Staphylococcus aureus} SCOP: d.92.1.2
Probab=80.27 E-value=5.4 Score=40.53 Aligned_cols=106 Identities=23% Similarity=0.318 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCC--ccEEEecCCCC-cccccccceeeecccccccCCCchh-HHHHHHHHHHHHHH
Q 003860 234 KFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAA-GAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHEL 309 (791)
Q Consensus 234 ~~~l~~~~~~l~~~e~~fg~~yP~~k--ld~v~~p~~~~-g~mE~~gli~~~e~~ll~~~~~~~~-~~~~~~~~~iaHEl 309 (791)
-.|...+.++.+||.+.|| .-++.. ..++..-.+.. ++-.++.-.++..+.+.|....... .....-..+++||+
T Consensus 68 vdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~Vhyg~~~~~~~y~NAfWdg~~m~fGdGdg~~f~~~~~~lDVv~HE~ 146 (301)
T 1bqb_A 68 VDANYYAKQTYDYYKNTFG-RESYDNHGSPIVSLTHVNHYGGQDNRNNAAWIGDKMIYGDGDGRTFTNLSGANDVVAHEI 146 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEECCCEETTEECTTCEEECSSSEEECCCCSSSBSCGGGCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEEeCCCCCCCCccCcEEcCCEEEEEcCCCcccCCcccccceeeeec
Confidence 3566678899999999999 556653 33333222111 1001111122222233333221000 00001246899999
Q ss_pred HHHHhcCccCccccchh-HHhhhHHHHHHHHH
Q 003860 310 AHQWFGNLVTMEWWTHL-WLNEGFATWVSYLA 340 (791)
Q Consensus 310 aHqWfGn~Vt~~~w~d~-WL~EGfA~y~~~~~ 340 (791)
+|--.-....+..-.+. =|||||+..++...
T Consensus 147 tHGVt~~~agl~y~~eSGaLnEs~SDifg~~~ 178 (301)
T 1bqb_A 147 THGVTQQTANLEYKDQSGALNESFSDVFGYFV 178 (301)
T ss_dssp HHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred ccceecccCCCcccCCcCchhHHHHHHHhHhh
Confidence 99766544444333333 48999999999753
No 14
>2y3u_A Collagenase, collagenase G; hydrolase, gluzincin, metalloprotease; HET: P6G FLC; 2.55A {Clostridium histolyticum} PDB: 2y50_A* 2y6i_A*
Probab=79.21 E-value=3 Score=48.19 Aligned_cols=39 Identities=21% Similarity=0.433 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhcCccCcccc---------chhHHhhhHHHHHHHH
Q 003860 301 VATVVAHELAHQWFGNLVTMEWW---------THLWLNEGFATWVSYL 339 (791)
Q Consensus 301 ~~~~iaHElaHqWfGn~Vt~~~w---------~d~WL~EGfA~y~~~~ 339 (791)
+..++.||++|.-=|-..-+..| .-.|+.||||+||+..
T Consensus 422 Lee~f~HEytHyLdgRy~~~G~f~~~~~y~~~~~vW~~EG~AEY~s~~ 469 (785)
T 2y3u_A 422 LEELFRHEYTHYLQARYLVDGLWGQGPFYEKNRLTWFDEGTAEFFAGS 469 (785)
T ss_dssp HHHHHHHHHHHHHHHHHTSCSSTTSSGGGTTTCSHHHHHHHHHHHTTB
T ss_pred ecccccchhhhccccccccccccccCcccccCCCceehhhHHHHHhcC
Confidence 44578999999984433333333 2579999999999754
No 15
>1lsh_A Lipovitellin (LV-1N, LV-1C); vitellogenin, lipoprotein, plasma apolipoprote apolipoprotein B, APOB; HET: PLD UPL; 1.90A {Ichthyomyzon unicuspis} SCOP: a.118.4.1 f.7.1.1 f.7.1.1
Probab=75.26 E-value=10 Score=46.22 Aligned_cols=195 Identities=14% Similarity=0.116 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHhccCChHHHHHHHhh-cCC---CCcHHHHHHHHHHHHHHHHHHhccCh
Q 003860 550 DLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMAS-YSE---ETEYTVLSNLITISYKIGRIAADARP 625 (791)
Q Consensus 550 ~~w~~l~~~L~~~~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~-l~~---E~~~~~w~~~~~~l~~l~~~~~~~~~ 625 (791)
.....|.+.+..++++..+-++++.-+.+.. .+-...++.+.- +.. ..+..+|.+++-.+..+-+.+....+
T Consensus 356 ~a~~~i~~~i~~~~l~~~ea~~~l~~~~~~~----~Pt~e~l~~~~~l~~~~~~~~~~~l~~ta~La~gslV~k~c~~~~ 431 (1056)
T 1lsh_A 356 EALLFLKRTLASEQLTSAEATQIVASTLSNQ----QATRESLSYARELLNTSFIRNRPILRKTAVLGYGSLVFRYCANTV 431 (1056)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHTC----CCCHHHHHHHHHHHTCHHHHTCHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHhhccC----CCCHHHHHHHHHHHhCcccccCHHHHHHHHHHHHHHHHHHhccCC
Confidence 4566677777777888888777776444332 233344443333 332 35677888888888776554432211
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCC--CCCCCCchhhh
Q 003860 626 ELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADR--TTPLLPPDIRK 703 (791)
Q Consensus 626 ~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~A~~~f~~~~~~~--~~~~i~~~lr~ 703 (791)
.+...+...+.+++...+++ + + ..-+...|..++..|++..+. .+..++.+. .....|..+|.
T Consensus 432 ~c~~~~v~~i~~~l~~~~~~-------~-~---~~~~~~~LkaLGN~g~p~~l~----~l~~~l~~~~~~~~~~~~rvr~ 496 (1056)
T 1lsh_A 432 SCPDELLQPLHDLLSQSSDR-------A-K---EEEIVLALKALGNAGQPNSIK----KIQRFLPGQGKSLDEYSTRVQA 496 (1056)
T ss_dssp SCCGGGTHHHHHHHHHHHHT-------T-C---HHHHHHHHHHHHHHTCGGGHH----HHHTTSTTSSSCCCCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhc-------C-C---hHHHHHHHHHhhccCChhHHH----HHHHhhcCccccccccchHHHH
Confidence 11111112222222222221 1 1 233466777888889886544 344555431 11234556664
Q ss_pred HhhheeeeccccCCHHHHHHHHHHHHcCCCHH-HHHH-HHHHhCCCCCHHHHHHHHHHhccC
Q 003860 704 AAYVAVMQKVSASDRSGYESLLRVYRETDLSQ-EKTR-ILSSLASCPDVNIVLEVLNFLLSS 763 (791)
Q Consensus 704 ~vy~~~~~~~~~g~~~~~~~l~~~y~~~~~~~-ek~~-ll~aL~ct~d~~ll~~~L~~~l~~ 763 (791)
+...++.+....-.....+.++..|.+...+. -|.. ++..|-|.++...|+++.+.+..+
T Consensus 497 aAi~ALr~~~~~~p~~v~~il~~i~~n~~e~~EvRiaA~~~Lm~t~P~~~~l~~ia~~l~~E 558 (1056)
T 1lsh_A 497 EAIMALRNIAKRDPRKVQEIVLPIFLNVAIKSELRIRSCIVFFESKPSVALVSMVAVRLRRE 558 (1056)
T ss_dssp HHHHTTTTGGGTCHHHHHHHHHHHHHCTTSCHHHHHHHHHHHHHTCCCHHHHHHHHHHHTTC
T ss_pred HHHHHHHHhhhhchHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHCcCHHHHHHHHHHHhhC
Confidence 43334433222222346777888887655443 4444 344445678888888888777654
No 16
>3dnz_A Thermolysin; hydrolase, metalloproteinase, calcium, metal-binding, metalloprotease, protease, secreted, zinc, zymogen; HET: LYS; 1.20A {Bacillus thermoproteolyticus} PDB: 1kjo_A* 1kjp_A* 1kkk_A* 1kl6_A* 1kr6_A* 1kro_A* 1ks7_A* 1kto_A* 1y3g_E* 2whz_A* 2wi0_A* 1kei_A* 3do0_A* 3do1_A* 3do2_A* 3fb0_A 3fbo_A 3fgd_A* 3flf_A* 3fv4_A* ...
Probab=73.60 E-value=6.1 Score=40.32 Aligned_cols=102 Identities=19% Similarity=0.126 Sum_probs=58.5
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccEEEecCCC---Ccccccccceeeeccc-ccccCCCchhHHHHHHHHHH
Q 003860 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFA---AGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 305 (791)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yP~~k--ld~v~~p~~~---~g~mE~~gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 305 (791)
.+..|...+.++.+||.+.|| .-++.. +.++..-.+. ..|.-+....+|..-. ..+.+- ..-..++
T Consensus 69 aavdA~~~~~~t~d~y~~~~g-r~sid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~-------~~slDVv 140 (316)
T 3dnz_A 69 PAVDAHYYAGVTYDYYKNVHN-RLSYDGNNAAIRSSVHYSQGYNNAFWNGSQMVYGDGDGQTFIPL-------SGGIDVV 140 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEESCTTTCCCEEECSSCEEECCCCSSSBSCG-------GGCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCceEEEEEecCCCccCceEcCCEEEEeCCCCcccccc-------cccccce
Confidence 345677788999999999999 556642 3344322221 1233333344444321 111111 0124689
Q ss_pred HHHHHHHHhcCccCccccchh-HHhhhHHHHHHHHHh
Q 003860 306 AHELAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 341 (791)
Q Consensus 306 aHElaHqWfGn~Vt~~~w~d~-WL~EGfA~y~~~~~~ 341 (791)
+||+.|--.-.......-.+. =|||+|+..+...+-
T Consensus 141 ~HE~tHgvt~~~agL~y~~esGaLNEs~SDifG~~ve 177 (316)
T 3dnz_A 141 AHELTHAVTDYTAGLIYQNESGAINEAISDIFGTLVE 177 (316)
T ss_dssp HHHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred eeeeccccccccCCCcccCCccchhHHHHHHHHHHHH
Confidence 999999766544333333333 489999999987654
No 17
>1u4g_A Elastase, pseudolysin; , inhibition, peptidase family M4, hydrolase; HET: HPI; 1.40A {Pseudomonas aeruginosa} SCOP: d.92.1.2 PDB: 1ezm_A* 3dbk_A*
Probab=71.10 E-value=92 Score=31.47 Aligned_cols=98 Identities=17% Similarity=0.247 Sum_probs=58.6
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCCCccccc--c--cceeeecccccccCCCchhHHHHHHHHHHHHH
Q 003860 233 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMEN--Y--GLVTYRETALLYDDQHSAAANKQRVATVVAHE 308 (791)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~fg~~yP~~kld~v~~p~~~~g~mE~--~--gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHE 308 (791)
+-.|.-.+.++.+||.+.|| .-++. ..++..-.+.. ..+| | ...+|..-.-.+.+ . .-..+++||
T Consensus 73 ~~DAhy~a~~~~d~y~~~~g-r~~id-~~l~~~Vhyg~-~y~NAfWdG~~M~fGDG~~~~~p----~----~~lDVv~HE 141 (301)
T 1u4g_A 73 LNDAHFFGGVVFKLYRDWFG-TSPLT-HKLYMKVHYGR-SVENAYWDGTAMLFGDGATMFYP----L----VSLDVAAHE 141 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEESCTT-TCCCEEECSSCEEECCCCSSBSC----S----CCHHHHHHH
T ss_pred hHHHHHhHHHHHHHHHHHcC-CCCCC-CceEEEEecCC-CccCcEecCcEEEeeCCCccccc----c----cccceeeec
Confidence 34555677899999999999 56765 24444332211 2222 2 22333332111111 1 135789999
Q ss_pred HHHHHhcCccCccccchh-HHhhhHHHHHHHHHh
Q 003860 309 LAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 341 (791)
Q Consensus 309 laHqWfGn~Vt~~~w~d~-WL~EGfA~y~~~~~~ 341 (791)
++|--.-....+....+. =|||||+..++..+-
T Consensus 142 ~tHGVt~~~agL~y~~eSGaLnEs~SDifG~~ve 175 (301)
T 1u4g_A 142 VSHGFTEQNSGLIYRGQSGGMNEAFSDMAGEAAE 175 (301)
T ss_dssp HHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceeccccCccccCCccchhHHHHHHHHHHHH
Confidence 999887766555544444 389999999987643
No 18
>4ger_A Gentlyase metalloprotease; metalloproteinase, tissue disaggregation, thermoly protease, hydrolase; HET: LYS; 1.59A {Paenibacillus polymyxa}
Probab=71.03 E-value=6.6 Score=39.85 Aligned_cols=109 Identities=24% Similarity=0.242 Sum_probs=62.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccEEEe---cCCCCcccccccceeeeccc-ccccCCCchhHHHHHHHHHH
Q 003860 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAI---PDFAAGAMENYGLVTYRETA-LLYDDQHSAAANKQRVATVV 305 (791)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yP~~k--ld~v~~---p~~~~g~mE~~gli~~~e~~-ll~~~~~~~~~~~~~~~~~i 305 (791)
.+..|...+.++.+||.+.|| .-++.. +.++.. ..--..|.-+....+|..-. ..+.+- ..-..++
T Consensus 62 aavdA~~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg~~y~NAfW~g~~m~fGDGdg~~f~~~-------~~slDVv 133 (304)
T 4ger_A 62 AGVDAHTYAAKTYDYYKAKFG-RNSIDGRGLQLRSTVHYGSRYNNAFWNGSQMTYGDGDGSTFIAF-------SGDPDVV 133 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCTTTSSCCCEEEEEEESSSCCCEEECSSCEEEECCCSSSBCCG-------GGSHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeEEEEEeCCCCccCceecCCEEEEeCCCCcccccc-------ccccchh
Confidence 345667788999999999999 556642 333322 11112233333344554421 111111 0124689
Q ss_pred HHHHHHHHhcCccCccccchh-HHhhhHHHHHHHHHhhhhCCcchhH
Q 003860 306 AHELAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAADSLFPEWKIW 351 (791)
Q Consensus 306 aHElaHqWfGn~Vt~~~w~d~-WL~EGfA~y~~~~~~~~~~~~~~~~ 351 (791)
+||++|--.-.......-.+. =|||+|+..+...+- .++|.+-
T Consensus 134 aHEltHGVt~~ta~L~Y~~qsGaLNEs~SDifG~~ve---~~dWliG 177 (304)
T 4ger_A 134 GHELTHGVTEYTSNLEYYGESGALNEAFSDVIGNDIQ---RKNWLVG 177 (304)
T ss_dssp HHHHHHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH---CSSSEES
T ss_pred hhccccccccccCCccccCCccchhHHHHHHHHHHhc---cCCceec
Confidence 999999766554333333332 489999999998765 3455543
No 19
>2vqx_A Metalloproteinase; thermolysin-like structure, zinc, protease, hydrolase, metalloprotease; 1.82A {Serratia proteamaculans}
Probab=70.66 E-value=7.5 Score=40.17 Aligned_cols=105 Identities=17% Similarity=0.209 Sum_probs=56.4
Q ss_pred hHHHHHHHHHHHHHHHHHHhCCCCCCCC--ccEEEecCCCCcccccccceeeecccccccCCCchh-HHHHHHHHHHHHH
Q 003860 232 QGKFALNVAVKTLELYKEYFAVPYSLPK--LDMIAIPDFAAGAMENYGLVTYRETALLYDDQHSAA-ANKQRVATVVAHE 308 (791)
Q Consensus 232 ~~~~~l~~~~~~l~~~e~~fg~~yP~~k--ld~v~~p~~~~g~mE~~gli~~~e~~ll~~~~~~~~-~~~~~~~~~iaHE 308 (791)
.+..+...+.++.+||.+.|| .-++.. ..++..-.+. ...+| .++..+.+.|....... .....-..+++||
T Consensus 89 av~~ay~~~~~t~d~y~~~~g-rnsid~~G~~l~~~VHyg-~~y~N---AfWdG~~M~fGDG~g~~f~~~~~~lDVv~HE 163 (341)
T 2vqx_A 89 AVDEAYDYLGVTYDFFWQAFK-RNSLDNQGLPLTGSVHYG-KEYQN---AFWNGQQMVFGDGDGEIFNRFTIAIDVVGHA 163 (341)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCSTTSSCCCEEEEESCS-SSCCC---EEECSSCEEECCCCSSSBCCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CCCCCCCCCeeEEEEecC-CCccC---ceecCcEeEeeCCCCcccCCcccchhhhhhh
Confidence 345566678889999999999 445542 3343332221 11122 11222223332211000 0000124689999
Q ss_pred HHHHHhcCccCccccchh-HHhhhHHHHHHHHHh
Q 003860 309 LAHQWFGNLVTMEWWTHL-WLNEGFATWVSYLAA 341 (791)
Q Consensus 309 laHqWfGn~Vt~~~w~d~-WL~EGfA~y~~~~~~ 341 (791)
++|--.-....+..-.+. =|||||+..++..+-
T Consensus 164 ltHGVt~~~agL~Y~~eSGaLNEs~SDifG~~ve 197 (341)
T 2vqx_A 164 LAHGVTESEAGLIYFQQAGALNESLSDVFGSLVK 197 (341)
T ss_dssp HHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred cccceecccCCccccCCCcchhhHHHHHHHHHHH
Confidence 999776544444333333 499999999987654
No 20
>3cqb_A Probable protease HTPX homolog; heat shock protein HTPX domain, PSI-2, protein structure INI structural genomics; HET: MSE; 1.86A {Vibrio parahaemolyticus rimd 2210633}
Probab=70.62 E-value=7.1 Score=33.04 Aligned_cols=67 Identities=19% Similarity=0.241 Sum_probs=34.9
Q ss_pred HHHHHHHHHHHHhCCCCCCCCccEEEecCCCCccccc-----ccceeeecccccccCCCchhHHHHHHHHHHHHHHHHHH
Q 003860 239 VAVKTLELYKEYFAVPYSLPKLDMIAIPDFAAGAMEN-----YGLVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 313 (791)
Q Consensus 239 ~~~~~l~~~e~~fg~~yP~~kld~v~~p~~~~g~mE~-----~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 313 (791)
...++++-+.+..|+|. ++ +..+++-...|+-. -+.|.+... ++-. .....+..++|||++|-=
T Consensus 27 ~L~~~~~~l~~~~~~~~--~~--v~v~~~~~~NAf~~g~~~~~~~i~v~~g-Ll~~------l~~~El~aVlaHElgH~~ 95 (107)
T 3cqb_A 27 WLLETVGRQAQQAGIGM--PT--VAIYDSADINAFATGAKRDDSLVAVSTG-LLHN------MTRDEAEAVLAHEVSHIA 95 (107)
T ss_dssp HHHHHHHHHHHHHTCCC--CE--EEEECCSSEEEEEECCC--CCEEEEEHH-HHHH------SCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCC--Ce--EEEEECCCcCEEEEecCCCCCEEEEcHH-HHhh------CCHHHHHHHHHHHHHHHH
Confidence 34555666667778653 33 44444322222211 133444443 2211 133568999999999975
Q ss_pred hcC
Q 003860 314 FGN 316 (791)
Q Consensus 314 fGn 316 (791)
-++
T Consensus 96 ~~h 98 (107)
T 3cqb_A 96 NGD 98 (107)
T ss_dssp TTC
T ss_pred CCC
Confidence 554
No 21
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=51.03 E-value=93 Score=26.68 Aligned_cols=26 Identities=15% Similarity=0.148 Sum_probs=19.9
Q ss_pred EEEEEeCCCCCCceEEEEEEEEeeeC
Q 003860 87 ILVLEFAETLPTGMGVLAIGFEGVLN 112 (791)
Q Consensus 87 ~l~i~l~~~l~~g~~~l~i~y~g~~~ 112 (791)
...+.++++++||.|+|+..+.|+..
T Consensus 81 ~f~~~w~~~~~pG~Ytl~a~l~~~~~ 106 (120)
T 3isy_A 81 DFSDVWKEVPEPGTYEVKVTFKGRAE 106 (120)
T ss_dssp EEEEEESSCCCSEEEEEEEEECCEET
T ss_pred EEEEEeCCCCCCccEEEEEEEEeeec
Confidence 34556677788899999999988764
No 22
>2qk1_A Protein STU2; STU2P, XMAP215, DIS1, TOG, CH-TOG, heat repeat, microtubule plus END, +TIP, protein binding; 1.70A {Saccharomyces cerevisiae}
Probab=50.99 E-value=1.3e+02 Score=29.18 Aligned_cols=131 Identities=11% Similarity=0.165 Sum_probs=81.7
Q ss_pred hhhHHHHHHHHHH-HHHh--c----cCChHHHHHHHh-hcCCCCcHHHHHHHHHHHHHHHHHHhccChhHHHHHH-HHHH
Q 003860 566 ETDRFGILDDHFA-LCMA--R----QQTLTSLLTLMA-SYSEETEYTVLSNLITISYKIGRIAADARPELLDYLK-QFFI 636 (791)
Q Consensus 566 ~~~r~~li~D~~~-la~~--g----~l~~~~~l~l~~-~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~~~~~~~~-~~~~ 636 (791)
-.+|..-+..+.. ++.. . ..+|..+++.+. .|.++.+..+...+++.+..|.+-+.. ..|. .|..
T Consensus 30 w~eRk~al~~L~~~~~~~~~~i~~~~~~~~~~~~~L~~~l~~D~n~~v~~~A~~al~~la~~l~~------~~f~~~y~~ 103 (249)
T 2qk1_A 30 WKDRVEALEEFWDSVLSQTKKLKSTSQNYSNLLGIYGHIIQKDANIQAVALAAQSVELICDKLKT------PGFSKDYVS 103 (249)
T ss_dssp HHHHHHHHHHHHHHTGGGCCCBCCTTCCCHHHHHHHHHHHHHCSCHHHHHHHHHHHHHHHHHHCT------TTSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCccccCcccHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHhccc------ccccHHHHH
Confidence 5677777888777 6642 1 346677787554 466889999988999888887765531 2477 8999
Q ss_pred HHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhc------C-CHHHHHHHHHHHHHhhcCCCCCCCCchhhhHhhhee
Q 003860 637 SLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALL------G-HKETLNEASKRFHAFLADRTTPLLPPDIRKAAYVAV 709 (791)
Q Consensus 637 ~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~------g-~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~vy~~~ 709 (791)
.++.+++++++= . ...........+..++... + .+.|++... ..+++ + .|..|..+...+
T Consensus 104 ~llp~ll~~l~d-k---k~~V~~aa~~al~~i~~~~~~~~~~~~l~~ll~~l~----~~l~~----k-~~~vk~~al~~l 170 (249)
T 2qk1_A 104 LVFTPLLDRTKE-K---KPSVIEAIRKALLTICKYYDPLASSGRNEDMLKDIL----EHMKH----K-TPQIRMECTQLF 170 (249)
T ss_dssp HHHHHHHHGGGC-C---CHHHHHHHHHHHHHHHHHSCTTCTTCTTHHHHHHHH----HHTTC----S-SHHHHHHHHHHH
T ss_pred HHHHHHHHHHcC-C---CHHHHHHHHHHHHHHHHHccccccCCcHHHHHHHHH----HHHcC----C-ChHHHHHHHHHH
Confidence 999999999962 1 1223344555555555555 3 445555432 33433 1 356777665554
Q ss_pred eecccc
Q 003860 710 MQKVSA 715 (791)
Q Consensus 710 ~~~~~~ 715 (791)
.+.+..
T Consensus 171 ~~~~~~ 176 (249)
T 2qk1_A 171 NASMKE 176 (249)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 444433
No 23
>2c9r_A COPC, copper resistance protein C; copper transport, copper proteins, copper dissociation const metal-binding, electron transport; 2.0A {Pseudomonas syringae PV} PDB: 1m42_A 1nm4_A 1ot4_A 2c9p_A 2c9q_A
Probab=34.41 E-value=1.3e+02 Score=24.86 Aligned_cols=57 Identities=14% Similarity=0.137 Sum_probs=30.7
Q ss_pred CCCEEEEEeCC-c--eEeEEEEEeecCCCCCcccC------eeEEEec-CCeEEEEEeCCCCCCceEEEEE
Q 003860 45 DTKFIVLNAAD-L--TINNRSVSFTNKVSSKALEP------TKVELVE-ADEILVLEFAETLPTGMGVLAI 105 (791)
Q Consensus 45 ~~~~i~L~~~~-l--~i~~v~~~~~~~~~~~~~~~------~~~~~~~-~~~~l~i~l~~~l~~g~~~l~i 105 (791)
....|.|.+.+ + ....+.|.+..+. .+.. .....+. ....+.+.++ +|++|.|+|.-
T Consensus 17 aP~~v~L~Fse~v~~~~s~v~v~~~~g~---~v~~~~~~~~~~~~~~~~~~~~~~~~l~-~L~~G~YtV~W 83 (102)
T 2c9r_A 17 APAKIELHFSENLVTQFSGAKLVMTAMP---GMEHSPMAVKAAVSGGGDPKTMVITPAS-PLTAGTYKVDW 83 (102)
T ss_dssp CCSCEEEEESSCCCGGGCEEEEEEEECC--------CEEECEEEEECSSTTEEEEEESS-CCCSEEEEEEE
T ss_pred CCCEEEEEeCCCCccCccEEEEECCCCC---eeeeccccccccceecCCCCcEEEEECC-CCCCceEEEEE
Confidence 34566676652 3 4566666553221 1222 3334443 3456778875 89999887653
No 24
>1r55_A ADAM 33; metalloprotease, inhibitor, asthma, hydrolase; HET: NAG MAN 097; 1.58A {Homo sapiens} SCOP: d.92.1.9 PDB: 1r54_A*
Probab=32.46 E-value=36 Score=32.55 Aligned_cols=14 Identities=36% Similarity=0.584 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 003860 300 RVATVVAHELAHQW 313 (791)
Q Consensus 300 ~~~~~iaHElaHqW 313 (791)
..+.++||||+|.+
T Consensus 135 ~~a~~~AHElGHnl 148 (214)
T 1r55_A 135 GAAATMAHEIGHSL 148 (214)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 36789999999986
No 25
>3c37_A Peptidase, M48 family; Q74D82, GSR143A, structural genomics, protein structure initiative, northeast structural genomics consortium; 1.70A {Geobacter sulfurreducens pca}
Probab=32.23 E-value=59 Score=32.00 Aligned_cols=19 Identities=32% Similarity=0.448 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHhcC
Q 003860 298 KQRVATVVAHELAHQWFGN 316 (791)
Q Consensus 298 ~~~~~~~iaHElaHqWfGn 316 (791)
...++.+||||++|-=-++
T Consensus 97 ~~ELaaVLaHElgH~~~~H 115 (253)
T 3c37_A 97 ETELAGVLAHEINHAVARH 115 (253)
T ss_dssp HHHHHHHHHHHHHHHHTTH
T ss_pred HHHHHHHHHHHHHHHHCcC
Confidence 3568999999999975543
No 26
>1lyq_A PCOC copper resistance protein; beta barrel, IG domain, metal binding protein; 1.50A {Escherichia coli} SCOP: b.1.18.17 PDB: 1ix2_A
Probab=31.71 E-value=1.4e+02 Score=24.75 Aligned_cols=57 Identities=19% Similarity=0.279 Sum_probs=30.7
Q ss_pred CCCEEEEEeCC-ce--EeEEEEEeecCCCCCcccC-------eeEEEec-CCeEEEEEeCCCCCCceEEEEE
Q 003860 45 DTKFIVLNAAD-LT--INNRSVSFTNKVSSKALEP-------TKVELVE-ADEILVLEFAETLPTGMGVLAI 105 (791)
Q Consensus 45 ~~~~i~L~~~~-l~--i~~v~~~~~~~~~~~~~~~-------~~~~~~~-~~~~l~i~l~~~l~~g~~~l~i 105 (791)
....|.|.+.+ ++ +..+.|.+..+. .+.. .....+. ....+.+.++ +|++|.|+|.-
T Consensus 18 aP~~V~L~Fse~v~~~~s~v~v~~~~g~---~v~~~~~~~~~~~~~~~~~~~~~~~~~l~-~L~~G~YtV~W 85 (104)
T 1lyq_A 18 APEKIQLNFSENLTVKFSGAKLTMTGMK---GMSSHSPMPVAAKVAPGADPKSMVIIPRE-PLPAGTYRVDW 85 (104)
T ss_dssp CCCCEEEEESSCCCGGGCEEEEEEEEEC------CCCCEECCEEEEECSSTTEEEEEESS-CCCSEEEEEEE
T ss_pred CCCEEEEEeCCCCcccccEEEEECCCCC---eeeeccccccccceeecCCCCcEEEEECC-CCCCceEEEEE
Confidence 34566666652 33 566666543221 1112 3334443 3456778776 89999887653
No 27
>1bud_A Protein (acutolysin A); metalloproteinase, snake venom, MMP, toxin; 1.90A {Deinagkistrodon acutus} SCOP: d.92.1.9 PDB: 1bsw_A
Probab=28.71 E-value=65 Score=30.21 Aligned_cols=14 Identities=50% Similarity=0.667 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 003860 300 RVATVVAHELAHQW 313 (791)
Q Consensus 300 ~~~~~iaHElaHqW 313 (791)
..+.++|||++|++
T Consensus 132 ~~a~~~AHElGH~l 145 (197)
T 1bud_A 132 LVAITLAHEMAHNL 145 (197)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 36889999999996
No 28
>1yp1_A FII; FII hydrolase; 1.90A {Deinagkistrodon acutus}
Probab=28.17 E-value=63 Score=30.51 Aligned_cols=13 Identities=54% Similarity=0.808 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 003860 301 VATVVAHELAHQW 313 (791)
Q Consensus 301 ~~~~iaHElaHqW 313 (791)
.+.++|||++|+.
T Consensus 135 ~a~~~AHElGH~l 147 (202)
T 1yp1_A 135 MAVVMAHELGHNL 147 (202)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
No 29
>2w15_A Zinc metalloproteinase BAP1; hydrolase inhibitor complex, metal-binding, zinc-depending, metalloprotease, metalloproteinase/inhibitor complex; HET: WR2; 1.05A {Bothrops asper} PDB: 2w12_A* 2w13_A* 2w14_A* 1nd1_A 3gbo_A
Probab=27.96 E-value=72 Score=30.03 Aligned_cols=14 Identities=50% Similarity=0.674 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHHH
Q 003860 300 RVATVVAHELAHQW 313 (791)
Q Consensus 300 ~~~~~iaHElaHqW 313 (791)
..+.++|||++|..
T Consensus 135 ~~a~~~AHElGH~l 148 (202)
T 2w15_A 135 WVAVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhhc
Confidence 36789999999995
No 30
>3lmc_A Peptidase, zinc-dependent; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, MUR16; 2.00A {Methanocorpusculum labreanum}
Probab=27.57 E-value=1.5e+02 Score=28.01 Aligned_cols=20 Identities=30% Similarity=0.420 Sum_probs=15.8
Q ss_pred hhHHHHHHHHHHHHHHHHHH
Q 003860 294 AAANKQRVATVVAHELAHQW 313 (791)
Q Consensus 294 ~~~~~~~~~~~iaHElaHqW 313 (791)
......++..+++||+.|.+
T Consensus 136 ~~l~~~Rv~k~~~HElGH~l 155 (210)
T 3lmc_A 136 DSALIDRIVKEGAHEIGHLF 155 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 33456678999999999986
No 31
>2ero_A VAP-1, vascular apoptosis-inducing protein 1; metalloprotease, disintegrin, calcium-binding, ADAM, SVMP, M protein, toxin; HET: NAG; 2.50A {Crotalus atrox} PDB: 2erp_A* 2erq_A*
Probab=27.27 E-value=71 Score=34.22 Aligned_cols=14 Identities=43% Similarity=0.620 Sum_probs=12.3
Q ss_pred HHHHHHHHHHHHHH
Q 003860 300 RVATVVAHELAHQW 313 (791)
Q Consensus 300 ~~~~~iaHElaHqW 313 (791)
..+.++||||+|++
T Consensus 145 ~~a~t~AHElGHnl 158 (427)
T 2ero_A 145 LVAIAMAHEMGHNL 158 (427)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhc
Confidence 46789999999997
No 32
>3nqx_A MCP-02, secreted metalloprotease MCP02; zinc metalloprotease, alpha/beta protein, hydrolase; 1.70A {Pseudoalteromonas SP} PDB: 3nqy_B 3nqz_B
Probab=26.92 E-value=5e+02 Score=26.11 Aligned_cols=99 Identities=15% Similarity=0.145 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCCCccEEEecCCC---CcccccccceeeecccccccCCCchhHHHHHHHHHHHHHH
Q 003860 233 GKFALNVAVKTLELYKEYFAVPYSLPKLDMIAIPDFA---AGAMENYGLVTYRETALLYDDQHSAAANKQRVATVVAHEL 309 (791)
Q Consensus 233 ~~~~l~~~~~~l~~~e~~fg~~yP~~kld~v~~p~~~---~g~mE~~gli~~~e~~ll~~~~~~~~~~~~~~~~~iaHEl 309 (791)
+..|.-.+.++.+||.++|| .-|+. ..++..-.+. ..|.-+...++|..-.-.+.+. .-..+++||+
T Consensus 74 ~~DAhy~a~~t~d~y~~~~g-r~~id-~~l~~~VHyg~~y~NAfWdg~~m~fGDG~~~~~~~--------~slDVv~HE~ 143 (306)
T 3nqx_A 74 LNDAHFFGNVIFNMYNDWLG-TAPLS-FQLQMRVHYSSNYENAFWDGSAMTFGDGQNTFYPL--------VSLDVSAHEV 143 (306)
T ss_dssp HHHHHHHHHHHHHHHHHHHS-SCSSS-SCEEEEEEESSSCCCEEECSSCEEEECCCSSBSCS--------CCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCCCC-CceEEEEecCCCccCccccCCEEEEeCCCcccccc--------cccchhhhhh
Confidence 44555677889999999999 55665 3443322111 1233333344554432111111 1346899999
Q ss_pred HHHHhcCccCccccc-hhHHhhhHHHHHHHHHh
Q 003860 310 AHQWFGNLVTMEWWT-HLWLNEGFATWVSYLAA 341 (791)
Q Consensus 310 aHqWfGn~Vt~~~w~-d~WL~EGfA~y~~~~~~ 341 (791)
.|--.-..-.+..-. .-=|||||+..++..+-
T Consensus 144 tHGvt~~~a~l~y~~esGaLnEs~SDifg~~ve 176 (306)
T 3nqx_A 144 SHGFTEQNSGLIYNGKPGGLNEAFSDMAGEAAE 176 (306)
T ss_dssp HHHHHHTTTCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccCCCCCccCCCCCcccchHHHHHHHHHH
Confidence 997765433332222 23589999999986643
No 33
>2ejq_A Hypothetical protein TTHA0227; NPPSFA, national project on protein structural and functional analyses; 2.08A {Thermus thermophilus} SCOP: d.92.1.17
Probab=24.40 E-value=41 Score=29.42 Aligned_cols=27 Identities=22% Similarity=0.191 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCccCcccc
Q 003860 296 ANKQRVATVVAHELAHQWFGNLVTMEWW 323 (791)
Q Consensus 296 ~~~~~~~~~iaHElaHqWfGn~Vt~~~w 323 (791)
.-...+..++.||+||.+ |.+-....|
T Consensus 84 eL~~~V~~tvvHEiaHhf-e~lag~~gl 110 (130)
T 2ejq_A 84 DWEAEVWETMLHELRHHL-ESLAGRDDL 110 (130)
T ss_dssp CHHHHHHHHHHHHHHHHH-HHHHTTC--
T ss_pred hHHHHHHHHHHHHhHHHH-HhhcccCCC
Confidence 345568899999999985 334333333
No 34
>3ltj_A Alpharep-4; protein engineering, heat-like repeat, protein binding; 1.80A {Synthetic}
Probab=23.42 E-value=4.1e+02 Score=23.94 Aligned_cols=172 Identities=17% Similarity=0.144 Sum_probs=101.0
Q ss_pred EcCHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHhccCChHHHHHHHhhcCCCCcHHHHHHHHHHHHHHHHHHhccCh
Q 003860 546 KYDKDLAARLGYAIEMKQLSETDRFGILDDHFALCMARQQTLTSLLTLMASYSEETEYTVLSNLITISYKIGRIAADARP 625 (791)
Q Consensus 546 ~Yd~~~w~~l~~~L~~~~~~~~~r~~li~D~~~la~~g~l~~~~~l~l~~~l~~E~~~~~w~~~~~~l~~l~~~~~~~~~ 625 (791)
..++.....+++.|.+. +...|..-+ ..|...|.- ...-.|++.|. +.+..+-..+...|..+. . +
T Consensus 10 ~~~~~~~~~~i~~L~~~--~~~vr~~A~---~~L~~~~~~--~~~~~L~~~l~-~~~~~vr~~a~~~L~~~~----~--~ 75 (201)
T 3ltj_A 10 HTDPEKVEMYIKNLQDD--SYYVRRAAA---YALGKIGDE--RAVEPLIKALK-DEDAWVRRAAADALGQIG----D--E 75 (201)
T ss_dssp CCCHHHHHHHHHHTTCS--CHHHHHHHH---HHHHHHCCG--GGHHHHHHHTT-CSSHHHHHHHHHHHHHHC----C--G
T ss_pred ccCCcchHHHHHHhcCC--CHHHHHHHH---HHHHhcCCh--hHHHHHHHHHc-CCCHHHHHHHHHHHHhhC----C--H
Confidence 34567777888877532 244454443 344444431 22233556664 456666666666654431 1 3
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCccCCCCCHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHhhcCCCCCCCCchhhhHh
Q 003860 626 ELLDYLKQFFISLFQNSAEKLGWDSKPGESHLDALLRGEIFTALALLGHKETLNEASKRFHAFLADRTTPLLPPDIRKAA 705 (791)
Q Consensus 626 ~~~~~~~~~~~~l~~~~~~~lg~~~~~~~~~~~~~lr~~i~~~ac~~g~~~c~~~A~~~f~~~~~~~~~~~i~~~lr~~v 705 (791)
+....+.+ .|. ++ +...|..++..++..+.+.++....+ .+.+ -++..|..+
T Consensus 76 ~~~~~L~~-----------~l~-----d~---~~~vr~~a~~aL~~~~~~~~~~~L~~----~l~d-----~~~~vr~~a 127 (201)
T 3ltj_A 76 RAVEPLIK-----------ALK-----DE---DGWVRQSAAVALGQIGDERAVEPLIK----ALKD-----EDWFVRIAA 127 (201)
T ss_dssp GGHHHHHH-----------HTT-----CS---SHHHHHHHHHHHHHHCCGGGHHHHHH----HTTC-----SSHHHHHHH
T ss_pred HHHHHHHH-----------HHc-----CC---CHHHHHHHHHHHHHhCcHHHHHHHHH----HHcC-----CCHHHHHHH
Confidence 23222222 221 11 24678888888899998876655444 3433 247788755
Q ss_pred hheeeeccccCCHHHHHHHHHHHHcCCCHHHHHHHHHHhCCCCCHHHHHHHHHHhccC
Q 003860 706 YVAVMQKVSASDRSGYESLLRVYRETDLSQEKTRILSSLASCPDVNIVLEVLNFLLSS 763 (791)
Q Consensus 706 y~~~~~~~~~g~~~~~~~l~~~y~~~~~~~ek~~ll~aL~ct~d~~ll~~~L~~~l~~ 763 (791)
..++.. .++......|.+... ..+..-|...+.+|+...++..+..+...+-++
T Consensus 128 ~~aL~~---~~~~~~~~~L~~~l~-d~~~~vr~~A~~aL~~~~~~~~~~~L~~~l~d~ 181 (201)
T 3ltj_A 128 AFALGE---IGDERAVEPLIKALK-DEDGWVRQSAADALGEIGGERVRAAMEKLAETG 181 (201)
T ss_dssp HHHHHH---HTCGGGHHHHHHHTT-CSSHHHHHHHHHHHHHHCSHHHHHHHHHHHHHC
T ss_pred HHHHHH---hCCHHHHHHHHHHHc-CCCHHHHHHHHHHHHHhCchhHHHHHHHHHhCC
Confidence 444433 456666777766654 456778999999999988988887777766443
No 35
>3iuk_A Uncharacterized protein; PF05960.1, DUF885, M32 carboxypeptidase-like fold, PSI, MCSG structural genomics, protein structure initiative; 1.85A {Arthrobacter aurescens}
Probab=23.07 E-value=1.2e+02 Score=33.77 Aligned_cols=54 Identities=15% Similarity=0.164 Sum_probs=32.2
Q ss_pred hCHHHHHHHHHHHHHH------hccCCCChHHHHHHHHhccCCCHHHHHHHhccCCCcce
Q 003860 406 LGAECFQRSLASYIKK------YACSNAKTEDLWAALEEGSGEPVNKLMNSWTKQKGYPV 459 (791)
Q Consensus 406 lG~~~F~~~l~~yl~~------~~~~~~~~~df~~~l~~~s~~~l~~~~~~W~~~~G~P~ 459 (791)
+.++.-..-+.+|+.. |+.+.....+|.+..++..|.+++.|-+.-+.....|+
T Consensus 495 ~~~~~a~~ev~Ry~~~Pgqa~sY~~G~~~i~~lR~~a~~~lGfdlk~FHd~vL~~G~~Pl 554 (562)
T 3iuk_A 495 ISEGQLQFEFTRYLGWPGQAPSYKVGQRLWEQIRAELESREGFDLKSFHSKALNIGSVGL 554 (562)
T ss_dssp CCHHHHHHHHHHHHHSTTSTTHHHHHHHHHHHHHHHHHTSTTCCHHHHHHHHHTTCSCCH
T ss_pred CChHHHHHHHHHHHcCCcHHhhHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHhCCCCCH
Confidence 3455555667777641 11122233455566666667888888877777666664
No 36
>3e11_A Predicted zincin-like metalloprotease; DUF1025 family protein, zincin-like fold, conserved matrix metalloprotease motif; 1.80A {Acidothermus cellulolyticus 11B} SCOP: d.92.1.17
Probab=21.63 E-value=52 Score=27.98 Aligned_cols=34 Identities=26% Similarity=0.416 Sum_probs=21.0
Q ss_pred ceeeecccccccCCCchhHHHHHHHHHHHHHHHHHH
Q 003860 278 LVTYRETALLYDDQHSAAANKQRVATVVAHELAHQW 313 (791)
Q Consensus 278 li~~~e~~ll~~~~~~~~~~~~~~~~~iaHElaHqW 313 (791)
+++|+... +-. -.+...-...+..++.||+||..
T Consensus 69 I~lYR~Pi-~~~-~~~~~el~~~V~~vvvhEiahh~ 102 (114)
T 3e11_A 69 IIIYRNTI-CAL-CETESEVIDEVRKTVVHEIAHHF 102 (114)
T ss_dssp EEEEHHHH-HHT-CSSHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEehHHH-HHH-hCChhHHHHHHHHHHHHHHHHHc
Confidence 56666552 211 12333445568899999999985
No 37
>1atl_A Atrolysin C; metalloendopeptidase, hydrolase-hydrolase inhibitor complex; HET: 0QI; 1.80A {Crotalus atrox} SCOP: d.92.1.9 PDB: 1htd_A 1dth_A* 3aig_A* 2aig_P* 4aig_A* 1iag_A
Probab=21.52 E-value=65 Score=30.40 Aligned_cols=14 Identities=36% Similarity=0.572 Sum_probs=12.0
Q ss_pred HHHHHHHHHHHHHH
Q 003860 300 RVATVVAHELAHQW 313 (791)
Q Consensus 300 ~~~~~iaHElaHqW 313 (791)
..+.++|||++|++
T Consensus 135 ~~a~~~AHElGHnl 148 (202)
T 1atl_A 135 LMGVTMAHELGHNL 148 (202)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred eeEEEehhhhcccc
Confidence 36789999999995
No 38
>1qua_A Acutolysin-C, hemorrhagin III; metalloprotease, hemorrhagic toxin, snake venom proteinase; 2.20A {Deinagkistrodon acutus} SCOP: d.92.1.9
Probab=21.24 E-value=67 Score=30.13 Aligned_cols=13 Identities=46% Similarity=0.721 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHH
Q 003860 301 VATVVAHELAHQW 313 (791)
Q Consensus 301 ~~~~iaHElaHqW 313 (791)
.+.++|||++|++
T Consensus 135 ~a~~~AHElGH~l 147 (197)
T 1qua_A 135 MAVTMAHELGHNL 147 (197)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 6789999999995
Done!