Query 003861
Match_columns 791
No_of_seqs 413 out of 2596
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 06:26:17 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003861.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003861hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1lnq_A MTHK channels, potassiu 99.9 4.4E-26 1.5E-30 249.3 16.2 205 531-762 115-326 (336)
2 4gx0_A TRKA domain protein; me 99.9 2.4E-24 8.3E-29 251.7 27.0 205 529-764 125-336 (565)
3 2aef_A Calcium-gated potassium 99.9 9.8E-25 3.3E-29 226.2 17.1 208 529-763 7-221 (234)
4 3fwz_A Inner membrane protein 99.9 7.1E-24 2.4E-28 202.3 16.1 135 529-673 5-139 (140)
5 3l9w_A Glutathione-regulated p 99.9 1.1E-23 3.7E-28 235.9 18.8 158 530-697 3-160 (413)
6 3l4b_C TRKA K+ channel protien 99.9 4.4E-24 1.5E-28 218.9 12.0 201 533-763 2-208 (218)
7 4g65_A TRK system potassium up 99.9 3.5E-23 1.2E-27 235.2 12.6 203 533-764 5-222 (461)
8 4gx0_A TRKA domain protein; me 99.9 2.3E-23 8E-28 243.4 11.0 198 532-764 349-552 (565)
9 3llv_A Exopolyphosphatase-rela 99.8 1.8E-20 6.2E-25 178.3 17.6 132 531-673 6-137 (141)
10 1id1_A Putative potassium chan 99.8 2.7E-20 9.2E-25 179.9 16.6 133 531-673 3-139 (153)
11 4g65_A TRK system potassium up 99.8 1.9E-20 6.6E-25 212.7 13.7 201 530-761 234-445 (461)
12 3c85_A Putative glutathione-re 99.8 1.6E-19 5.6E-24 179.6 16.9 137 530-676 38-176 (183)
13 1zcd_A Na(+)/H(+) antiporter 1 99.8 7.7E-20 2.6E-24 200.1 6.3 295 159-503 58-381 (388)
14 3naf_A Calcium-activated potas 99.7 1.7E-17 5.7E-22 195.5 15.3 217 529-761 51-313 (798)
15 3mt5_A Potassium large conduct 99.7 6.4E-17 2.2E-21 188.6 12.8 215 530-760 2-262 (726)
16 2hmt_A YUAA protein; RCK, KTN, 99.7 1.8E-16 6.1E-21 150.1 11.6 132 531-673 6-138 (144)
17 1lss_A TRK system potassium up 99.7 7.6E-16 2.6E-20 145.1 15.1 131 532-673 5-136 (140)
18 2g1u_A Hypothetical protein TM 99.7 3.3E-16 1.1E-20 151.6 12.4 134 529-673 17-151 (155)
19 4hpf_A Potassium channel subfa 99.4 1.8E-12 6.1E-17 155.4 12.5 219 530-760 2-264 (722)
20 3ic5_A Putative saccharopine d 98.1 1.1E-05 3.8E-10 72.5 10.4 101 532-646 6-107 (118)
21 1kyq_A Met8P, siroheme biosynt 97.5 0.00019 6.5E-09 75.2 7.9 103 531-646 13-147 (274)
22 3dfz_A SIRC, precorrin-2 dehyd 97.3 0.00055 1.9E-08 69.6 9.0 94 531-644 31-126 (223)
23 3naf_A Calcium-activated potas 97.3 0.00057 1.9E-08 81.0 9.9 161 528-692 398-629 (798)
24 1vct_A Hypothetical protein PH 97.3 2.6E-06 8.9E-11 85.9 -8.8 132 591-763 42-186 (205)
25 4hpf_A Potassium channel subfa 97.2 0.00064 2.2E-08 81.2 9.0 123 529-652 383-529 (722)
26 3abi_A Putative uncharacterize 97.1 0.0023 7.9E-08 69.9 12.3 111 530-656 15-129 (365)
27 3zux_A Transporter, ASBTNM; tr 97.1 0.46 1.6E-05 51.0 32.1 42 433-474 240-282 (332)
28 2ew2_A 2-dehydropantoate 2-red 97.0 0.001 3.5E-08 70.5 7.3 105 533-649 5-118 (316)
29 2jl1_A Triphenylmethane reduct 97.0 0.0027 9.4E-08 66.1 10.4 87 533-630 2-98 (287)
30 2z2v_A Hypothetical protein PH 96.9 0.0037 1.3E-07 68.4 11.7 112 529-656 14-129 (365)
31 3g0o_A 3-hydroxyisobutyrate de 96.9 0.0037 1.3E-07 66.4 10.9 111 531-659 7-127 (303)
32 1hdo_A Biliverdin IX beta redu 96.8 0.0014 4.7E-08 64.5 6.6 73 532-615 4-77 (206)
33 3qha_A Putative oxidoreductase 96.8 0.0067 2.3E-07 64.2 12.3 109 531-659 15-130 (296)
34 3ktd_A Prephenate dehydrogenas 96.8 0.0037 1.3E-07 67.7 10.3 94 530-639 7-100 (341)
35 2rir_A Dipicolinate synthase, 96.8 0.0055 1.9E-07 65.0 11.2 124 531-673 157-284 (300)
36 2zcu_A Uncharacterized oxidore 96.8 0.0049 1.7E-07 64.0 10.4 88 533-631 1-96 (286)
37 3l6d_A Putative oxidoreductase 96.7 0.0095 3.3E-07 63.3 12.3 106 531-656 9-123 (306)
38 1pjq_A CYSG, siroheme synthase 96.7 0.0044 1.5E-07 69.8 9.9 95 532-645 13-109 (457)
39 4dll_A 2-hydroxy-3-oxopropiona 96.7 0.0099 3.4E-07 63.6 12.2 109 532-659 32-149 (320)
40 4gbj_A 6-phosphogluconate dehy 96.7 0.0058 2E-07 64.9 10.2 112 530-660 4-123 (297)
41 3pef_A 6-phosphogluconate dehy 96.7 0.009 3.1E-07 62.8 11.6 108 533-659 3-120 (287)
42 2r6j_A Eugenol synthase 1; phe 96.6 0.0066 2.3E-07 64.3 10.3 90 530-630 10-106 (318)
43 2h78_A Hibadh, 3-hydroxyisobut 96.6 0.012 4.1E-07 62.2 12.1 109 532-659 4-122 (302)
44 3doj_A AT3G25530, dehydrogenas 96.6 0.0082 2.8E-07 64.0 10.8 109 532-659 22-140 (310)
45 3ius_A Uncharacterized conserv 96.5 0.0061 2.1E-07 63.4 9.3 68 531-614 5-72 (286)
46 3cky_A 2-hydroxymethyl glutara 96.5 0.011 3.8E-07 62.3 11.2 109 532-659 5-123 (301)
47 2wm3_A NMRA-like family domain 96.5 0.0061 2.1E-07 64.0 9.1 73 531-614 5-81 (299)
48 3h2s_A Putative NADH-flavin re 96.5 0.0028 9.4E-08 63.4 6.2 84 533-629 2-92 (224)
49 3obb_A Probable 3-hydroxyisobu 96.5 0.0096 3.3E-07 63.2 10.7 108 533-659 5-122 (300)
50 1qyd_A Pinoresinol-lariciresin 96.5 0.0068 2.3E-07 63.9 9.5 88 532-630 5-107 (313)
51 3e48_A Putative nucleoside-dip 96.5 0.0072 2.5E-07 63.0 9.2 88 533-631 2-98 (289)
52 1txg_A Glycerol-3-phosphate de 96.4 0.0017 5.9E-08 69.6 4.4 95 533-639 2-104 (335)
53 2f1k_A Prephenate dehydrogenas 96.4 0.012 4.1E-07 61.4 10.7 87 533-639 2-90 (279)
54 2cvz_A Dehydrogenase, 3-hydrox 96.4 0.01 3.6E-07 62.0 10.0 66 533-618 3-68 (289)
55 3pdu_A 3-hydroxyisobutyrate de 96.4 0.0099 3.4E-07 62.4 9.9 108 533-659 3-120 (287)
56 3qvo_A NMRA family protein; st 96.4 0.0034 1.1E-07 63.8 5.9 74 532-616 24-99 (236)
57 3e8x_A Putative NAD-dependent 96.4 0.012 4E-07 59.6 10.0 71 531-614 21-93 (236)
58 2gas_A Isoflavone reductase; N 96.4 0.013 4.3E-07 61.6 10.4 88 532-630 3-103 (307)
59 1qyc_A Phenylcoumaran benzylic 96.4 0.0082 2.8E-07 63.1 9.0 88 532-630 5-104 (308)
60 1jw9_B Molybdopterin biosynthe 96.3 0.0049 1.7E-07 63.7 7.0 88 531-630 31-146 (249)
61 3dqp_A Oxidoreductase YLBE; al 96.3 0.0071 2.4E-07 60.4 8.0 70 533-615 2-73 (219)
62 3c1o_A Eugenol synthase; pheny 96.3 0.014 4.8E-07 61.8 10.2 88 532-630 5-104 (321)
63 3d4o_A Dipicolinate synthase s 96.2 0.024 8.1E-07 59.9 11.8 112 531-661 155-268 (293)
64 4e21_A 6-phosphogluconate dehy 96.2 0.019 6.5E-07 62.5 11.3 107 532-656 23-137 (358)
65 1vpd_A Tartronate semialdehyde 96.2 0.017 6E-07 60.7 10.8 68 532-618 6-74 (299)
66 3r6d_A NAD-dependent epimerase 96.2 0.01 3.6E-07 59.3 8.6 89 532-630 6-99 (221)
67 4ina_A Saccharopine dehydrogen 96.2 0.01 3.6E-07 65.7 9.1 114 533-660 3-141 (405)
68 3i6i_A Putative leucoanthocyan 96.2 0.014 4.9E-07 62.6 10.0 88 532-630 11-110 (346)
69 1leh_A Leucine dehydrogenase; 96.2 0.0046 1.6E-07 67.5 6.0 106 531-661 173-284 (364)
70 3ggo_A Prephenate dehydrogenas 96.2 0.015 5E-07 62.2 9.8 92 531-640 33-128 (314)
71 3d1l_A Putative NADP oxidoredu 96.2 0.013 4.5E-07 60.6 9.1 88 533-640 12-102 (266)
72 1xgk_A Nitrogen metabolite rep 96.1 0.03 1E-06 60.6 12.3 89 531-630 5-103 (352)
73 4gwg_A 6-phosphogluconate dehy 96.1 0.025 8.4E-07 64.1 11.5 114 532-659 5-128 (484)
74 2p4q_A 6-phosphogluconate dehy 96.1 0.035 1.2E-06 63.1 12.9 116 529-659 8-134 (497)
75 1lld_A L-lactate dehydrogenase 96.0 0.022 7.7E-07 60.6 10.4 132 532-679 8-169 (319)
76 2g5c_A Prephenate dehydrogenas 96.0 0.014 4.8E-07 60.9 8.5 86 533-638 3-94 (281)
77 1bg6_A N-(1-D-carboxylethyl)-L 96.0 0.016 5.5E-07 62.5 9.2 92 532-638 5-108 (359)
78 3dhn_A NAD-dependent epimerase 96.0 0.0078 2.7E-07 60.3 6.1 72 532-615 5-77 (227)
79 3tri_A Pyrroline-5-carboxylate 95.9 0.036 1.2E-06 58.1 11.2 88 532-639 4-97 (280)
80 2zyd_A 6-phosphogluconate dehy 95.9 0.042 1.4E-06 62.2 12.3 112 530-656 14-135 (480)
81 1hyh_A L-hicdh, L-2-hydroxyiso 95.9 0.055 1.9E-06 57.5 12.6 129 533-680 3-168 (309)
82 2vns_A Metalloreductase steap3 95.9 0.011 3.6E-07 59.6 6.5 66 532-616 29-94 (215)
83 2we8_A Xanthine dehydrogenase; 95.9 0.0087 3E-07 65.7 6.3 113 530-654 203-323 (386)
84 2x4g_A Nucleoside-diphosphate- 95.8 0.02 6.8E-07 61.0 9.0 71 533-614 15-86 (342)
85 3c24_A Putative oxidoreductase 95.8 0.015 5.1E-07 61.0 7.8 90 532-642 12-103 (286)
86 3hwr_A 2-dehydropantoate 2-red 95.8 0.023 7.8E-07 60.7 9.3 110 530-657 18-138 (318)
87 4e12_A Diketoreductase; oxidor 95.8 0.014 4.9E-07 61.2 7.6 92 532-639 5-120 (283)
88 3ew7_A LMO0794 protein; Q8Y8U8 95.8 0.0051 1.7E-07 61.2 3.9 69 533-615 2-71 (221)
89 4ezb_A Uncharacterized conserv 95.8 0.021 7.1E-07 61.1 8.9 105 530-655 23-142 (317)
90 3ego_A Probable 2-dehydropanto 95.8 0.011 3.9E-07 62.8 6.6 112 532-657 3-118 (307)
91 1ff9_A Saccharopine reductase; 95.7 0.025 8.5E-07 63.6 9.2 111 532-656 4-120 (450)
92 1i36_A Conserved hypothetical 95.7 0.019 6.5E-07 59.3 7.7 65 533-617 2-68 (264)
93 3on5_A BH1974 protein; structu 95.6 0.026 8.8E-07 61.3 8.6 110 530-653 198-308 (362)
94 3k96_A Glycerol-3-phosphate de 95.5 0.038 1.3E-06 60.1 9.8 95 531-640 29-134 (356)
95 2ahr_A Putative pyrroline carb 95.5 0.041 1.4E-06 56.6 9.6 66 533-616 5-71 (259)
96 3gt0_A Pyrroline-5-carboxylate 95.4 0.035 1.2E-06 56.8 8.7 66 532-616 3-74 (247)
97 1xq6_A Unknown protein; struct 95.4 0.027 9.2E-07 56.9 7.8 71 532-614 5-78 (253)
98 4huj_A Uncharacterized protein 95.4 0.04 1.4E-06 55.5 8.9 67 532-616 24-92 (220)
99 1yqg_A Pyrroline-5-carboxylate 95.4 0.029 9.8E-07 57.8 7.9 63 533-614 2-66 (263)
100 2gf2_A Hibadh, 3-hydroxyisobut 95.4 0.032 1.1E-06 58.5 8.4 139 533-692 2-153 (296)
101 3oj0_A Glutr, glutamyl-tRNA re 95.4 0.02 6.9E-07 53.4 6.1 69 531-616 21-91 (144)
102 1np3_A Ketol-acid reductoisome 95.3 0.028 9.7E-07 60.6 8.0 68 532-618 17-85 (338)
103 1a5z_A L-lactate dehydrogenase 95.3 0.074 2.5E-06 56.8 11.1 131 533-681 2-163 (319)
104 1yb4_A Tartronic semialdehyde 95.3 0.024 8.1E-07 59.5 7.1 67 533-618 5-71 (295)
105 2pgd_A 6-phosphogluconate dehy 95.3 0.076 2.6E-06 60.1 11.7 110 533-659 4-126 (482)
106 1ks9_A KPA reductase;, 2-dehyd 95.3 0.0072 2.5E-07 63.1 3.0 102 533-650 2-108 (291)
107 3ce6_A Adenosylhomocysteinase; 95.3 0.012 4.3E-07 66.5 5.0 86 531-637 274-359 (494)
108 2uyy_A N-PAC protein; long-cha 95.3 0.049 1.7E-06 57.8 9.4 71 532-621 31-102 (316)
109 2axq_A Saccharopine dehydrogen 95.3 0.031 1.1E-06 63.1 8.2 74 532-616 24-99 (467)
110 3hn2_A 2-dehydropantoate 2-red 95.2 0.048 1.6E-06 57.9 9.3 107 532-656 3-121 (312)
111 2qyt_A 2-dehydropantoate 2-red 95.2 0.014 4.8E-07 61.8 5.0 101 533-650 10-128 (317)
112 3n58_A Adenosylhomocysteinase; 95.2 0.013 4.5E-07 65.0 4.8 84 531-635 247-330 (464)
113 2eez_A Alanine dehydrogenase; 95.2 0.016 5.6E-07 63.3 5.4 74 531-616 166-240 (369)
114 1jay_A Coenzyme F420H2:NADP+ o 95.1 0.0096 3.3E-07 59.3 3.2 68 533-617 2-76 (212)
115 1smk_A Malate dehydrogenase, g 95.1 0.12 4E-06 55.5 11.9 139 532-683 9-177 (326)
116 1pgj_A 6PGDH, 6-PGDH, 6-phosph 95.1 0.076 2.6E-06 60.1 11.0 92 533-638 3-101 (478)
117 3dtt_A NADP oxidoreductase; st 95.1 0.067 2.3E-06 54.7 9.6 70 530-617 18-102 (245)
118 2v6b_A L-LDH, L-lactate dehydr 95.1 0.072 2.5E-06 56.5 10.0 132 533-682 2-162 (304)
119 3gpi_A NAD-dependent epimerase 95.1 0.019 6.6E-07 59.7 5.4 69 532-614 4-72 (286)
120 3b1f_A Putative prephenate deh 95.0 0.05 1.7E-06 57.0 8.6 89 532-639 7-100 (290)
121 2iz1_A 6-phosphogluconate dehy 95.0 0.084 2.9E-06 59.6 11.0 94 532-640 6-103 (474)
122 1cyd_A Carbonyl reductase; sho 95.0 0.055 1.9E-06 54.7 8.6 73 532-614 8-85 (244)
123 3qsg_A NAD-binding phosphogluc 95.0 0.046 1.6E-06 58.1 8.3 68 532-617 25-95 (312)
124 3eod_A Protein HNR; response r 95.0 0.2 6.7E-06 44.7 11.4 98 562-660 5-109 (130)
125 1mv8_A GMD, GDP-mannose 6-dehy 95.0 0.045 1.5E-06 61.2 8.4 70 533-616 2-87 (436)
126 2bka_A CC3, TAT-interacting pr 95.0 0.0098 3.4E-07 60.2 2.7 73 532-615 19-94 (242)
127 3h9u_A Adenosylhomocysteinase; 94.9 0.029 9.8E-07 62.2 6.5 65 531-614 211-275 (436)
128 2izz_A Pyrroline-5-carboxylate 94.9 0.083 2.8E-06 56.4 10.1 87 533-639 24-117 (322)
129 1dlj_A UDP-glucose dehydrogena 94.9 0.077 2.6E-06 58.6 10.1 106 533-654 2-134 (402)
130 1y1p_A ARII, aldehyde reductas 94.8 0.06 2.1E-06 57.1 8.5 73 531-614 11-92 (342)
131 3gg2_A Sugar dehydrogenase, UD 94.8 0.029 9.9E-07 63.0 6.2 72 533-616 4-89 (450)
132 3p2y_A Alanine dehydrogenase/p 94.8 0.011 3.9E-07 64.5 2.8 98 531-639 184-302 (381)
133 3d64_A Adenosylhomocysteinase; 94.8 0.021 7.1E-07 64.6 4.9 84 531-635 277-360 (494)
134 3gvp_A Adenosylhomocysteinase 94.8 0.02 7E-07 63.3 4.7 85 531-636 220-304 (435)
135 2raf_A Putative dinucleotide-b 94.7 0.11 3.9E-06 51.7 9.8 73 531-641 19-91 (209)
136 3d3w_A L-xylulose reductase; u 94.7 0.074 2.5E-06 53.8 8.6 73 532-614 8-85 (244)
137 2dpo_A L-gulonate 3-dehydrogen 94.7 0.073 2.5E-06 56.9 8.8 104 532-649 7-132 (319)
138 1lu9_A Methylene tetrahydromet 94.7 0.062 2.1E-06 56.3 8.1 72 532-614 120-197 (287)
139 3ezy_A Dehydrogenase; structur 94.6 0.14 4.8E-06 55.0 11.0 110 533-659 4-122 (344)
140 3orq_A N5-carboxyaminoimidazol 94.6 0.023 8E-07 62.1 4.8 110 531-655 12-125 (377)
141 3pqe_A L-LDH, L-lactate dehydr 94.5 0.21 7.1E-06 53.5 11.9 133 531-682 5-170 (326)
142 3i83_A 2-dehydropantoate 2-red 94.5 0.047 1.6E-06 58.2 6.8 109 532-657 3-124 (320)
143 2y0c_A BCEC, UDP-glucose dehyd 94.5 0.078 2.7E-06 60.0 8.9 74 530-615 7-94 (478)
144 1zcj_A Peroxisomal bifunctiona 94.5 0.18 6E-06 56.8 11.7 69 532-617 38-126 (463)
145 4id9_A Short-chain dehydrogena 94.5 0.045 1.5E-06 58.5 6.6 67 530-613 18-85 (347)
146 1mld_A Malate dehydrogenase; o 94.5 0.18 6E-06 53.8 11.1 136 533-683 2-169 (314)
147 1f0y_A HCDH, L-3-hydroxyacyl-C 94.4 0.14 4.8E-06 54.0 10.3 39 532-580 16-54 (302)
148 1z82_A Glycerol-3-phosphate de 94.4 0.054 1.8E-06 58.1 7.1 70 530-615 13-90 (335)
149 3ruf_A WBGU; rossmann fold, UD 94.4 0.19 6.5E-06 53.6 11.4 73 531-614 25-109 (351)
150 3m2p_A UDP-N-acetylglucosamine 94.4 0.079 2.7E-06 55.7 8.3 68 532-614 3-71 (311)
151 3ojo_A CAP5O; rossmann fold, c 94.4 0.047 1.6E-06 60.8 6.6 73 533-617 13-95 (431)
152 3ghy_A Ketopantoate reductase 94.3 0.054 1.9E-06 58.2 6.8 69 532-616 4-81 (335)
153 1v8b_A Adenosylhomocysteinase; 94.3 0.02 6.8E-07 64.5 3.4 99 531-650 257-357 (479)
154 3e18_A Oxidoreductase; dehydro 94.2 0.17 5.6E-06 54.9 10.5 108 532-658 6-122 (359)
155 2ph5_A Homospermidine synthase 94.2 0.07 2.4E-06 59.7 7.4 99 529-640 11-115 (480)
156 2c5a_A GDP-mannose-3', 5'-epim 94.1 0.03 1E-06 61.0 4.4 72 532-614 30-102 (379)
157 2gn4_A FLAA1 protein, UDP-GLCN 94.1 0.073 2.5E-06 57.3 7.3 72 532-614 22-100 (344)
158 3eag_A UDP-N-acetylmuramate:L- 94.0 0.078 2.7E-06 56.8 7.3 91 531-639 4-97 (326)
159 3q2o_A Phosphoribosylaminoimid 94.0 0.069 2.4E-06 58.5 7.0 110 531-655 14-127 (389)
160 3uuw_A Putative oxidoreductase 94.0 0.18 6.3E-06 53.1 10.1 106 532-657 7-122 (308)
161 1guz_A Malate dehydrogenase; o 94.0 0.078 2.7E-06 56.4 7.1 135 533-682 2-166 (310)
162 2ehd_A Oxidoreductase, oxidore 94.0 0.08 2.7E-06 53.2 6.8 74 531-614 5-87 (234)
163 1tlt_A Putative oxidoreductase 93.9 0.19 6.5E-06 53.3 10.1 106 532-657 6-121 (319)
164 2ewd_A Lactate dehydrogenase,; 93.9 0.27 9.1E-06 52.3 11.2 131 531-679 4-166 (317)
165 3o38_A Short chain dehydrogena 93.9 0.063 2.1E-06 55.3 6.1 73 532-614 23-110 (266)
166 3f9i_A 3-oxoacyl-[acyl-carrier 93.9 0.12 4E-06 52.5 7.9 75 530-614 13-93 (249)
167 1wwk_A Phosphoglycerate dehydr 93.8 0.033 1.1E-06 59.2 3.9 66 532-617 143-208 (307)
168 3bio_A Oxidoreductase, GFO/IDH 93.8 0.1 3.5E-06 55.3 7.6 85 532-638 10-95 (304)
169 3ko8_A NAD-dependent epimerase 93.8 0.071 2.4E-06 55.9 6.3 69 533-614 2-71 (312)
170 2gcg_A Glyoxylate reductase/hy 93.8 0.045 1.5E-06 58.8 4.8 66 532-616 156-221 (330)
171 1evy_A Glycerol-3-phosphate de 93.8 0.073 2.5E-06 57.8 6.5 69 533-616 17-96 (366)
172 3sxp_A ADP-L-glycero-D-mannohe 93.7 0.06 2.1E-06 58.0 5.8 73 532-614 11-99 (362)
173 3njr_A Precorrin-6Y methylase; 93.7 0.35 1.2E-05 47.8 10.8 95 531-643 56-158 (204)
174 3ged_A Short-chain dehydrogena 93.6 0.086 2.9E-06 54.2 6.4 73 531-613 2-83 (247)
175 1sb8_A WBPP; epimerase, 4-epim 93.6 0.098 3.3E-06 56.0 7.0 72 532-614 28-111 (352)
176 3lk7_A UDP-N-acetylmuramoylala 93.6 0.1 3.5E-06 58.5 7.4 89 531-638 9-102 (451)
177 1b8p_A Protein (malate dehydro 93.5 0.23 8E-06 53.1 9.9 138 532-682 6-181 (329)
178 4dio_A NAD(P) transhydrogenase 93.5 0.032 1.1E-06 61.5 3.0 98 531-639 190-312 (405)
179 3cea_A MYO-inositol 2-dehydrog 93.5 0.27 9.1E-06 52.7 10.4 110 531-657 8-128 (346)
180 3pid_A UDP-glucose 6-dehydroge 93.5 0.098 3.3E-06 58.2 7.0 70 532-616 37-120 (432)
181 2d5c_A AROE, shikimate 5-dehyd 93.5 0.064 2.2E-06 55.5 5.2 105 533-658 118-227 (263)
182 3jtm_A Formate dehydrogenase, 93.4 0.051 1.8E-06 58.9 4.5 85 531-633 164-250 (351)
183 3p7m_A Malate dehydrogenase; p 93.4 0.48 1.6E-05 50.6 12.0 134 532-683 6-171 (321)
184 1zej_A HBD-9, 3-hydroxyacyl-CO 93.4 0.18 6.1E-06 53.2 8.5 69 530-618 11-86 (293)
185 1y7t_A Malate dehydrogenase; N 93.4 0.39 1.3E-05 51.2 11.3 138 532-682 5-178 (327)
186 3rc1_A Sugar 3-ketoreductase; 93.4 0.16 5.6E-06 54.7 8.5 109 532-658 28-146 (350)
187 3gvi_A Malate dehydrogenase; N 93.3 0.5 1.7E-05 50.5 12.0 135 531-683 7-173 (324)
188 2qxy_A Response regulator; reg 93.3 0.6 2.1E-05 42.1 11.1 97 563-660 3-105 (142)
189 3e9m_A Oxidoreductase, GFO/IDH 93.2 0.16 5.6E-06 54.2 8.0 110 532-659 6-125 (330)
190 2pzm_A Putative nucleotide sug 93.2 0.052 1.8E-06 57.7 4.0 72 532-614 21-97 (330)
191 2pv7_A T-protein [includes: ch 93.1 0.15 5.1E-06 53.8 7.4 35 532-576 22-57 (298)
192 2glx_A 1,5-anhydro-D-fructose 93.0 0.17 5.9E-06 53.8 7.9 108 533-659 2-120 (332)
193 2g76_A 3-PGDH, D-3-phosphoglyc 93.0 0.057 1.9E-06 58.2 4.0 65 532-617 166-231 (335)
194 2vhw_A Alanine dehydrogenase; 93.0 0.069 2.3E-06 58.5 4.7 74 531-616 168-242 (377)
195 1uls_A Putative 3-oxoacyl-acyl 93.0 0.15 5.2E-06 51.8 7.0 73 532-614 6-86 (245)
196 2ag5_A DHRS6, dehydrogenase/re 92.9 0.12 4.2E-06 52.5 6.3 72 532-613 7-82 (246)
197 4hkt_A Inositol 2-dehydrogenas 92.9 0.37 1.3E-05 51.3 10.3 107 532-658 4-120 (331)
198 3vku_A L-LDH, L-lactate dehydr 92.9 0.57 1.9E-05 50.1 11.6 134 530-682 8-173 (326)
199 2rcy_A Pyrroline carboxylate r 92.8 0.18 6.2E-06 51.6 7.4 87 532-644 5-96 (262)
200 3p19_A BFPVVD8, putative blue 92.8 0.096 3.3E-06 54.2 5.3 74 531-614 16-96 (266)
201 3euw_A MYO-inositol dehydrogen 92.8 0.42 1.5E-05 51.1 10.6 107 532-657 5-121 (344)
202 4e4t_A Phosphoribosylaminoimid 92.7 0.052 1.8E-06 60.3 3.3 110 531-655 35-148 (419)
203 3db2_A Putative NADPH-dependen 92.7 0.43 1.5E-05 51.4 10.5 110 532-659 6-124 (354)
204 3ak4_A NADH-dependent quinucli 92.7 0.17 5.9E-06 51.9 7.0 73 532-614 13-95 (263)
205 3hzh_A Chemotaxis response reg 92.7 0.27 9.3E-06 45.7 7.9 96 565-660 37-141 (157)
206 3nzo_A UDP-N-acetylglucosamine 92.7 0.15 5.2E-06 56.0 7.0 73 531-613 35-120 (399)
207 1fmc_A 7 alpha-hydroxysteroid 92.7 0.16 5.4E-06 51.5 6.6 73 532-614 12-97 (255)
208 3kto_A Response regulator rece 92.6 0.7 2.4E-05 41.5 10.4 96 564-660 6-110 (136)
209 3vtf_A UDP-glucose 6-dehydroge 92.6 0.17 6E-06 56.3 7.3 71 532-614 22-106 (444)
210 1y6j_A L-lactate dehydrogenase 92.6 0.34 1.2E-05 51.7 9.4 134 531-682 7-171 (318)
211 2dbq_A Glyoxylate reductase; D 92.6 0.089 3E-06 56.6 4.9 66 532-617 151-216 (334)
212 3nep_X Malate dehydrogenase; h 92.6 0.53 1.8E-05 50.1 10.7 134 533-683 2-167 (314)
213 2c29_D Dihydroflavonol 4-reduc 92.5 0.073 2.5E-06 56.6 4.1 70 532-612 6-84 (337)
214 3h5n_A MCCB protein; ubiquitin 92.5 0.32 1.1E-05 52.6 9.2 88 531-630 118-234 (353)
215 1ek6_A UDP-galactose 4-epimera 92.5 0.17 5.7E-06 53.9 6.9 73 532-614 3-90 (348)
216 1xea_A Oxidoreductase, GFO/IDH 92.5 0.27 9.3E-06 52.2 8.5 107 533-657 4-119 (323)
217 2pd6_A Estradiol 17-beta-dehyd 92.5 0.19 6.5E-06 51.3 7.0 72 532-613 8-100 (264)
218 1ez4_A Lactate dehydrogenase; 92.5 0.5 1.7E-05 50.3 10.5 134 531-682 5-169 (318)
219 3ohs_X Trans-1,2-dihydrobenzen 92.5 0.54 1.9E-05 50.1 10.8 107 533-657 4-122 (334)
220 1pzg_A LDH, lactate dehydrogen 92.4 0.15 5.2E-06 54.7 6.4 136 531-682 9-180 (331)
221 3asu_A Short-chain dehydrogena 92.4 0.22 7.6E-06 50.7 7.4 71 533-613 2-82 (248)
222 2i6t_A Ubiquitin-conjugating e 92.4 0.47 1.6E-05 50.2 10.1 136 531-683 14-174 (303)
223 1y81_A Conserved hypothetical 92.4 0.079 2.7E-06 49.4 3.6 105 530-660 13-123 (138)
224 3ldh_A Lactate dehydrogenase; 92.4 0.75 2.5E-05 49.2 11.6 137 530-683 20-187 (330)
225 3q2i_A Dehydrogenase; rossmann 92.3 0.3 1E-05 52.6 8.7 110 532-659 14-133 (354)
226 4had_A Probable oxidoreductase 92.3 0.45 1.6E-05 51.0 10.1 109 533-658 25-143 (350)
227 2ho3_A Oxidoreductase, GFO/IDH 92.3 0.52 1.8E-05 50.0 10.4 107 533-657 3-118 (325)
228 2bgk_A Rhizome secoisolaricire 92.3 0.17 5.9E-06 52.0 6.5 72 532-613 17-100 (278)
229 1zk4_A R-specific alcohol dehy 92.3 0.17 5.7E-06 51.3 6.2 73 532-614 7-91 (251)
230 3guy_A Short-chain dehydrogena 92.3 0.26 8.9E-06 49.4 7.6 72 533-614 3-81 (230)
231 2ekl_A D-3-phosphoglycerate de 92.2 0.084 2.9E-06 56.3 4.0 67 531-617 142-208 (313)
232 2v6g_A Progesterone 5-beta-red 92.2 0.12 4.2E-06 55.3 5.4 71 533-614 3-81 (364)
233 3fpf_A Mtnas, putative unchara 92.2 0.34 1.2E-05 51.1 8.5 94 530-639 122-222 (298)
234 3mog_A Probable 3-hydroxybutyr 92.2 0.51 1.7E-05 53.3 10.6 93 532-640 6-120 (483)
235 3gem_A Short chain dehydrogena 92.2 0.17 5.8E-06 52.1 6.2 73 532-614 28-108 (260)
236 4e7p_A Response regulator; DNA 92.2 0.54 1.8E-05 43.1 9.2 97 564-660 20-124 (150)
237 3f6c_A Positive transcription 92.2 0.38 1.3E-05 43.0 7.9 96 565-660 2-104 (134)
238 2hjr_A Malate dehydrogenase; m 92.2 0.78 2.7E-05 49.0 11.6 134 531-682 14-179 (328)
239 2yy7_A L-threonine dehydrogena 92.1 0.1 3.6E-06 54.5 4.6 71 532-614 3-77 (312)
240 3ond_A Adenosylhomocysteinase; 92.1 0.16 5.5E-06 57.1 6.3 66 531-615 265-330 (488)
241 2z1n_A Dehydrogenase; reductas 92.1 0.18 6.2E-06 51.6 6.3 72 532-614 8-94 (260)
242 3kht_A Response regulator; PSI 92.1 1.3 4.4E-05 40.0 11.6 109 563-671 4-122 (144)
243 2a35_A Hypothetical protein PA 92.1 0.068 2.3E-06 52.7 2.9 67 531-614 5-74 (215)
244 1yb1_A 17-beta-hydroxysteroid 92.0 0.2 6.7E-06 51.8 6.5 73 532-614 32-117 (272)
245 3ek2_A Enoyl-(acyl-carrier-pro 92.0 0.24 8.4E-06 50.6 7.2 74 530-613 13-100 (271)
246 1oc2_A DTDP-glucose 4,6-dehydr 92.0 0.1 3.6E-06 55.5 4.5 72 532-614 5-84 (348)
247 3dii_A Short-chain dehydrogena 92.0 0.2 6.8E-06 51.0 6.4 72 532-613 3-83 (247)
248 2j6i_A Formate dehydrogenase; 92.0 0.14 4.8E-06 55.8 5.5 67 532-616 165-232 (364)
249 4e5n_A Thermostable phosphite 92.0 0.12 3.9E-06 55.6 4.7 66 532-616 146-211 (330)
250 3l6e_A Oxidoreductase, short-c 92.0 0.17 5.9E-06 51.1 5.8 73 532-614 4-86 (235)
251 3c1a_A Putative oxidoreductase 92.0 0.19 6.4E-06 53.3 6.4 108 532-658 11-126 (315)
252 1xu9_A Corticosteroid 11-beta- 91.9 0.16 5.4E-06 52.9 5.7 71 532-612 29-113 (286)
253 1yo6_A Putative carbonyl reduc 91.9 0.19 6.5E-06 50.6 6.1 72 532-613 4-89 (250)
254 3rd5_A Mypaa.01249.C; ssgcid, 91.9 0.31 1.1E-05 50.8 7.9 73 532-614 17-95 (291)
255 3mz0_A Inositol 2-dehydrogenas 91.9 0.54 1.9E-05 50.3 10.0 107 533-655 4-120 (344)
256 3enk_A UDP-glucose 4-epimerase 91.9 0.22 7.4E-06 52.8 6.8 74 531-614 5-87 (341)
257 2rh8_A Anthocyanidin reductase 91.9 0.085 2.9E-06 56.1 3.6 71 531-612 9-87 (338)
258 1l7d_A Nicotinamide nucleotide 91.9 0.07 2.4E-06 58.5 3.0 48 531-588 172-219 (384)
259 3k6j_A Protein F01G10.3, confi 91.8 0.18 6.1E-06 56.5 6.2 101 532-648 55-174 (460)
260 1ur5_A Malate dehydrogenase; o 91.8 0.78 2.7E-05 48.6 11.0 134 532-683 3-168 (309)
261 1pqw_A Polyketide synthase; ro 91.8 0.54 1.9E-05 45.8 9.2 74 531-615 39-117 (198)
262 2o3j_A UDP-glucose 6-dehydroge 91.8 0.17 5.9E-06 57.2 6.2 43 532-584 10-54 (481)
263 2zqz_A L-LDH, L-lactate dehydr 91.8 1.1 3.8E-05 47.8 12.2 134 531-682 9-173 (326)
264 3awd_A GOX2181, putative polyo 91.8 0.21 7.2E-06 50.8 6.3 72 532-613 14-98 (260)
265 2cfc_A 2-(R)-hydroxypropyl-COM 91.8 0.18 6.2E-06 51.0 5.8 72 532-613 3-88 (250)
266 4ffl_A PYLC; amino acid, biosy 91.8 0.086 2.9E-06 57.0 3.5 76 532-620 2-78 (363)
267 1p9l_A Dihydrodipicolinate red 91.8 0.58 2E-05 47.9 9.5 107 533-673 2-117 (245)
268 3mt5_A Potassium large conduct 91.8 0.13 4.3E-06 60.6 5.0 119 528-651 374-555 (726)
269 1gdh_A D-glycerate dehydrogena 91.8 0.18 6E-06 53.9 5.9 67 532-617 147-214 (320)
270 2nwq_A Probable short-chain de 91.7 0.17 5.9E-06 52.4 5.7 74 530-613 20-105 (272)
271 1oju_A MDH, malate dehydrogena 91.7 1.1 3.7E-05 47.1 11.9 130 533-680 2-163 (294)
272 1x0v_A GPD-C, GPDH-C, glycerol 91.7 0.13 4.6E-06 55.2 5.0 70 532-616 9-101 (354)
273 3evt_A Phosphoglycerate dehydr 91.7 0.36 1.2E-05 51.6 8.2 66 531-616 137-202 (324)
274 2wsb_A Galactitol dehydrogenas 91.7 0.2 6.8E-06 50.8 6.0 72 532-613 12-93 (254)
275 4g2n_A D-isomer specific 2-hyd 91.7 0.13 4.4E-06 55.6 4.7 81 532-632 174-256 (345)
276 1c1d_A L-phenylalanine dehydro 91.6 0.28 9.7E-06 53.0 7.3 106 531-661 175-285 (355)
277 1p77_A Shikimate 5-dehydrogena 91.6 0.17 5.7E-06 52.7 5.4 111 531-659 119-238 (272)
278 2w2k_A D-mandelate dehydrogena 91.6 0.11 3.9E-06 56.1 4.3 69 532-617 164-232 (348)
279 2d0i_A Dehydrogenase; structur 91.6 0.11 3.7E-06 55.9 4.1 65 532-616 147-211 (333)
280 2pd4_A Enoyl-[acyl-carrier-pro 91.6 0.32 1.1E-05 50.2 7.6 72 532-613 7-92 (275)
281 4fn4_A Short chain dehydrogena 91.6 0.25 8.4E-06 51.0 6.6 61 530-600 5-73 (254)
282 2dc1_A L-aspartate dehydrogena 91.6 0.29 9.9E-06 49.6 7.0 104 533-664 2-114 (236)
283 1qsg_A Enoyl-[acyl-carrier-pro 91.6 0.26 9E-06 50.6 6.8 72 532-613 10-95 (265)
284 4dad_A Putative pilus assembly 91.5 0.55 1.9E-05 42.7 8.4 98 562-660 18-125 (146)
285 1hdc_A 3-alpha, 20 beta-hydrox 91.5 0.23 7.9E-06 50.7 6.3 72 532-613 6-87 (254)
286 2pnf_A 3-oxoacyl-[acyl-carrier 91.5 0.22 7.4E-06 50.3 6.0 73 532-614 8-94 (248)
287 4b79_A PA4098, probable short- 91.5 0.12 4.1E-06 52.9 4.0 70 533-612 13-85 (242)
288 1hxh_A 3BETA/17BETA-hydroxyste 91.5 0.18 6.3E-06 51.4 5.5 72 532-613 7-88 (253)
289 2nac_A NAD-dependent formate d 91.5 0.13 4.5E-06 56.5 4.6 67 532-616 192-258 (393)
290 4e6p_A Probable sorbitol dehyd 91.5 0.24 8.1E-06 50.8 6.3 73 532-614 9-91 (259)
291 2q1s_A Putative nucleotide sug 91.5 0.13 4.5E-06 55.7 4.6 72 532-614 33-108 (377)
292 3cnb_A DNA-binding response re 91.5 0.72 2.5E-05 41.4 9.0 99 562-660 6-114 (143)
293 1yde_A Retinal dehydrogenase/r 91.4 0.23 7.9E-06 51.3 6.3 72 532-613 10-90 (270)
294 2c20_A UDP-glucose 4-epimerase 91.4 0.097 3.3E-06 55.3 3.4 72 533-614 3-76 (330)
295 4dgs_A Dehydrogenase; structur 91.4 0.32 1.1E-05 52.3 7.5 81 532-635 172-254 (340)
296 3lua_A Response regulator rece 91.4 1.7 5.9E-05 38.9 11.6 95 564-659 4-110 (140)
297 3ucx_A Short chain dehydrogena 91.4 0.26 8.8E-06 50.7 6.5 72 532-613 12-96 (264)
298 2rjn_A Response regulator rece 91.4 1.3 4.5E-05 40.5 11.0 97 562-659 5-109 (154)
299 3gvc_A Oxidoreductase, probabl 91.4 0.31 1.1E-05 50.6 7.2 72 532-613 30-111 (277)
300 3ec7_A Putative dehydrogenase; 91.4 0.59 2E-05 50.5 9.7 108 532-655 24-141 (357)
301 3imf_A Short chain dehydrogena 91.4 0.3 1E-05 50.0 7.0 73 532-614 7-92 (257)
302 1pjc_A Protein (L-alanine dehy 91.4 0.11 3.7E-06 56.5 3.8 74 532-616 168-241 (361)
303 1tmy_A CHEY protein, TMY; chem 91.4 1 3.5E-05 39.1 9.7 95 565-659 3-104 (120)
304 2jah_A Clavulanic acid dehydro 91.4 0.26 8.9E-06 50.1 6.5 72 532-613 8-92 (247)
305 3slg_A PBGP3 protein; structur 91.4 0.11 3.6E-06 56.2 3.7 71 532-613 25-99 (372)
306 1iy8_A Levodione reductase; ox 91.4 0.25 8.5E-06 50.8 6.4 72 532-613 14-100 (267)
307 3r1i_A Short-chain type dehydr 91.4 0.3 1E-05 50.7 7.1 72 532-613 33-117 (276)
308 3ba1_A HPPR, hydroxyphenylpyru 91.3 0.062 2.1E-06 57.8 1.8 62 532-616 165-226 (333)
309 2pi1_A D-lactate dehydrogenase 91.3 0.07 2.4E-06 57.4 2.2 80 532-632 142-223 (334)
310 2ph3_A 3-oxoacyl-[acyl carrier 91.3 0.33 1.1E-05 48.7 7.2 72 533-614 3-89 (245)
311 1nyt_A Shikimate 5-dehydrogena 91.3 0.13 4.5E-06 53.5 4.2 71 531-617 119-192 (271)
312 3fi9_A Malate dehydrogenase; s 91.3 1.4 4.9E-05 47.3 12.5 136 531-682 8-173 (343)
313 3qiv_A Short-chain dehydrogena 91.3 0.22 7.6E-06 50.6 5.9 72 532-613 10-94 (253)
314 2wyu_A Enoyl-[acyl carrier pro 91.3 0.26 8.9E-06 50.5 6.4 72 532-613 9-94 (261)
315 1xkq_A Short-chain reductase f 91.3 0.21 7.2E-06 51.8 5.8 72 532-613 7-94 (280)
316 2c07_A 3-oxoacyl-(acyl-carrier 91.3 0.39 1.3E-05 49.8 7.9 73 532-614 45-130 (285)
317 3rft_A Uronate dehydrogenase; 91.3 0.089 3E-06 54.2 2.8 67 533-613 5-72 (267)
318 4a7p_A UDP-glucose dehydrogena 91.3 0.33 1.1E-05 54.2 7.7 42 531-582 8-49 (446)
319 1qkk_A DCTD, C4-dicarboxylate 91.2 1.3 4.5E-05 40.6 10.8 96 564-660 3-105 (155)
320 1x13_A NAD(P) transhydrogenase 91.2 0.08 2.7E-06 58.5 2.6 98 531-639 172-292 (401)
321 3nyw_A Putative oxidoreductase 91.2 0.29 1E-05 49.9 6.7 74 531-614 7-96 (250)
322 3hdg_A Uncharacterized protein 91.2 0.36 1.2E-05 43.3 6.7 98 562-660 5-109 (137)
323 2o23_A HADH2 protein; HSD17B10 91.2 0.22 7.4E-06 50.9 5.7 72 532-613 13-94 (265)
324 1nff_A Putative oxidoreductase 91.2 0.26 9E-06 50.5 6.3 73 532-614 8-90 (260)
325 3svt_A Short-chain type dehydr 91.2 0.26 9E-06 51.1 6.4 73 532-614 12-100 (281)
326 2a4k_A 3-oxoacyl-[acyl carrier 91.2 0.27 9.3E-06 50.6 6.5 72 532-613 7-88 (263)
327 4aj2_A L-lactate dehydrogenase 91.2 1.2 4.2E-05 47.6 11.7 137 530-683 18-185 (331)
328 3tnl_A Shikimate dehydrogenase 91.2 0.29 1E-05 52.1 6.8 73 531-614 154-235 (315)
329 3l77_A Short-chain alcohol deh 91.2 0.43 1.5E-05 47.8 7.8 73 532-614 3-89 (235)
330 2h7i_A Enoyl-[acyl-carrier-pro 91.1 0.31 1.1E-05 50.2 6.8 72 532-613 8-95 (269)
331 2ixa_A Alpha-N-acetylgalactosa 91.1 0.74 2.5E-05 51.3 10.4 113 532-658 21-148 (444)
332 3h7a_A Short chain dehydrogena 91.1 0.21 7.2E-06 51.0 5.5 73 532-614 8-92 (252)
333 3gg9_A D-3-phosphoglycerate de 91.1 0.083 2.8E-06 57.3 2.5 85 532-635 161-247 (352)
334 3o8q_A Shikimate 5-dehydrogena 91.1 0.17 5.8E-06 53.0 4.8 121 531-668 126-253 (281)
335 1xq1_A Putative tropinone redu 91.1 0.3 1E-05 50.0 6.6 73 532-614 15-101 (266)
336 2xxj_A L-LDH, L-lactate dehydr 91.1 0.87 3E-05 48.3 10.4 132 533-682 2-164 (310)
337 3jte_A Response regulator rece 91.1 1 3.5E-05 40.6 9.7 95 565-660 4-107 (143)
338 1yj8_A Glycerol-3-phosphate de 91.0 0.23 8E-06 54.0 6.1 69 532-616 22-114 (375)
339 2qr3_A Two-component system re 91.0 0.84 2.9E-05 40.9 9.0 95 565-660 4-110 (140)
340 1t2d_A LDH-P, L-lactate dehydr 91.0 0.3 1E-05 52.1 6.8 133 532-682 5-174 (322)
341 1uuf_A YAHK, zinc-type alcohol 91.0 0.47 1.6E-05 51.4 8.5 74 531-616 195-268 (369)
342 2yjz_A Metalloreductase steap4 90.4 0.042 1.4E-06 54.7 0.0 65 532-616 20-84 (201)
343 2ae2_A Protein (tropinone redu 91.0 0.24 8.3E-06 50.6 5.8 73 532-614 10-96 (260)
344 3ppi_A 3-hydroxyacyl-COA dehyd 91.0 0.25 8.4E-06 51.2 5.9 70 533-612 32-110 (281)
345 4eso_A Putative oxidoreductase 90.9 0.27 9.2E-06 50.3 6.1 72 532-613 9-90 (255)
346 3cxt_A Dehydrogenase with diff 90.9 0.32 1.1E-05 50.9 6.8 72 532-613 35-119 (291)
347 4hv4_A UDP-N-acetylmuramate--L 90.9 0.21 7.3E-06 56.6 5.8 88 531-638 22-111 (494)
348 3d0o_A L-LDH 1, L-lactate dehy 90.9 1.7 6E-05 46.0 12.6 133 532-682 7-171 (317)
349 3gt7_A Sensor protein; structu 90.9 1.3 4.4E-05 40.8 10.4 98 562-660 5-111 (154)
350 2p91_A Enoyl-[acyl-carrier-pro 90.9 0.36 1.2E-05 50.2 7.1 72 532-613 22-107 (285)
351 1geg_A Acetoin reductase; SDR 90.9 0.29 1E-05 49.9 6.3 72 532-613 3-87 (256)
352 4dyv_A Short-chain dehydrogena 90.9 0.31 1.1E-05 50.5 6.5 72 532-613 29-110 (272)
353 1ldn_A L-lactate dehydrogenase 90.9 1.6 5.5E-05 46.2 12.3 134 531-682 6-171 (316)
354 3keo_A Redox-sensing transcrip 90.8 0.18 6.1E-06 50.5 4.4 87 530-630 83-172 (212)
355 1zud_1 Adenylyltransferase THI 90.8 0.48 1.6E-05 48.7 7.8 88 531-630 28-143 (251)
356 3oig_A Enoyl-[acyl-carrier-pro 90.8 0.3 1E-05 50.1 6.3 72 532-613 8-95 (266)
357 3rkr_A Short chain oxidoreduct 90.8 0.25 8.5E-06 50.7 5.7 73 532-614 30-115 (262)
358 3two_A Mannitol dehydrogenase; 90.7 0.27 9.2E-06 52.8 6.1 69 531-616 177-245 (348)
359 2hk9_A Shikimate dehydrogenase 90.7 0.27 9.2E-06 51.2 6.0 67 532-616 130-197 (275)
360 3tl2_A Malate dehydrogenase; c 90.7 0.22 7.5E-06 53.1 5.3 135 531-683 8-176 (315)
361 3ai3_A NADPH-sorbose reductase 90.7 0.3 1E-05 50.0 6.2 73 532-614 8-94 (263)
362 3pk0_A Short-chain dehydrogena 90.7 0.4 1.4E-05 49.2 7.2 73 532-614 11-97 (262)
363 3afn_B Carbonyl reductase; alp 90.7 0.2 7E-06 50.7 4.9 73 532-614 8-94 (258)
364 3lyl_A 3-oxoacyl-(acyl-carrier 90.7 0.31 1.1E-05 49.3 6.2 73 532-614 6-91 (247)
365 1yqd_A Sinapyl alcohol dehydro 90.7 0.52 1.8E-05 51.0 8.4 74 531-616 188-262 (366)
366 2i76_A Hypothetical protein; N 90.7 0.17 5.7E-06 52.7 4.3 65 533-617 4-70 (276)
367 1xg5_A ARPG836; short chain de 90.7 0.28 9.7E-06 50.7 6.0 73 532-614 33-120 (279)
368 1dbw_A Transcriptional regulat 90.6 1.9 6.4E-05 37.9 10.8 96 564-660 3-105 (126)
369 1wma_A Carbonyl reductase [NAD 90.6 0.37 1.3E-05 49.1 6.9 72 532-613 5-90 (276)
370 2wtb_A MFP2, fatty acid multif 90.6 1.1 3.9E-05 53.1 11.8 69 532-617 313-403 (725)
371 2egg_A AROE, shikimate 5-dehyd 90.6 0.25 8.5E-06 52.1 5.6 73 531-616 141-215 (297)
372 3m2t_A Probable dehydrogenase; 90.5 0.69 2.4E-05 49.9 9.2 110 532-658 6-125 (359)
373 3u62_A Shikimate dehydrogenase 90.5 0.28 9.6E-06 50.5 5.7 131 533-682 110-244 (253)
374 2b4q_A Rhamnolipids biosynthes 90.5 0.23 7.8E-06 51.6 5.1 73 532-614 30-114 (276)
375 1eq2_A ADP-L-glycero-D-mannohe 90.5 0.26 8.8E-06 51.3 5.6 69 533-614 1-77 (310)
376 4hy3_A Phosphoglycerate oxidor 90.5 0.26 8.9E-06 53.6 5.7 84 531-634 176-261 (365)
377 3pp8_A Glyoxylate/hydroxypyruv 90.5 0.12 4E-06 55.2 2.9 66 531-616 139-204 (315)
378 1h6d_A Precursor form of gluco 90.5 0.64 2.2E-05 51.7 9.1 110 532-658 84-207 (433)
379 3ay3_A NAD-dependent epimerase 90.5 0.062 2.1E-06 55.2 0.7 67 533-613 4-71 (267)
380 1zem_A Xylitol dehydrogenase; 90.5 0.34 1.2E-05 49.7 6.3 72 532-613 8-92 (262)
381 1xhl_A Short-chain dehydrogena 90.4 0.27 9.2E-06 51.7 5.7 72 532-613 27-114 (297)
382 2qv0_A Protein MRKE; structura 90.4 0.72 2.4E-05 41.7 8.0 99 562-660 7-111 (143)
383 3m1a_A Putative dehydrogenase; 90.4 0.28 9.6E-06 50.7 5.7 73 532-614 6-88 (281)
384 4fgs_A Probable dehydrogenase 90.4 0.5 1.7E-05 49.2 7.6 74 530-613 27-111 (273)
385 4g81_D Putative hexonate dehyd 90.4 0.26 8.8E-06 50.9 5.3 75 529-613 6-94 (255)
386 1orr_A CDP-tyvelose-2-epimeras 90.4 0.26 8.8E-06 52.3 5.6 71 533-614 3-82 (347)
387 1vl8_A Gluconate 5-dehydrogena 90.4 0.31 1E-05 50.3 5.9 72 532-613 22-107 (267)
388 2l0e_A Sodium/hydrogen exchang 90.4 0.046 1.6E-06 37.8 -0.3 29 238-266 2-30 (33)
389 2p5y_A UDP-glucose 4-epimerase 90.4 0.17 5.8E-06 53.0 4.0 69 533-613 2-74 (311)
390 3eul_A Possible nitrate/nitrit 90.3 1 3.5E-05 41.2 9.1 99 562-660 13-119 (152)
391 3phh_A Shikimate dehydrogenase 90.3 0.32 1.1E-05 50.6 6.0 65 531-615 118-182 (269)
392 4dqx_A Probable oxidoreductase 90.3 0.41 1.4E-05 49.7 6.9 73 532-614 28-110 (277)
393 3tjr_A Short chain dehydrogena 90.3 0.35 1.2E-05 50.8 6.5 73 532-614 32-117 (301)
394 2zat_A Dehydrogenase/reductase 90.3 0.34 1.2E-05 49.5 6.2 72 532-613 15-99 (260)
395 2q3e_A UDP-glucose 6-dehydroge 90.3 0.1 3.5E-06 58.8 2.4 42 532-583 6-49 (467)
396 3cz5_A Two-component response 90.3 1 3.4E-05 41.3 8.9 96 564-659 5-108 (153)
397 2ew8_A (S)-1-phenylethanol deh 90.3 0.38 1.3E-05 48.9 6.5 72 532-613 8-90 (249)
398 2vt3_A REX, redox-sensing tran 90.2 0.24 8.2E-06 49.7 4.8 85 530-630 84-169 (215)
399 3tzq_B Short-chain type dehydr 90.2 0.35 1.2E-05 49.9 6.3 72 532-613 12-93 (271)
400 3pwz_A Shikimate dehydrogenase 90.2 0.37 1.3E-05 50.2 6.4 115 531-661 120-240 (272)
401 3lf2_A Short chain oxidoreduct 90.2 0.46 1.6E-05 48.8 7.1 73 532-614 9-96 (265)
402 2bll_A Protein YFBG; decarboxy 90.2 0.11 3.8E-06 55.1 2.4 70 533-613 2-75 (345)
403 3n74_A 3-ketoacyl-(acyl-carrie 90.1 0.37 1.3E-05 49.1 6.3 72 532-613 10-91 (261)
404 3f4l_A Putative oxidoreductase 90.1 0.5 1.7E-05 50.7 7.6 110 533-659 4-123 (345)
405 3g17_A Similar to 2-dehydropan 90.1 0.044 1.5E-06 57.7 -0.8 98 532-646 3-103 (294)
406 2qq5_A DHRS1, dehydrogenase/re 90.1 0.31 1E-05 49.9 5.6 72 532-613 6-91 (260)
407 1ae1_A Tropinone reductase-I; 90.0 0.38 1.3E-05 49.7 6.4 72 532-613 22-107 (273)
408 1spx_A Short-chain reductase f 90.0 0.29 9.9E-06 50.5 5.4 72 532-613 7-94 (278)
409 2pln_A HP1043, response regula 90.0 1.2 4E-05 39.9 9.0 94 562-660 16-116 (137)
410 3g79_A NDP-N-acetyl-D-galactos 90.0 0.29 9.8E-06 55.2 5.6 41 532-582 19-65 (478)
411 1yxm_A Pecra, peroxisomal tran 90.0 0.38 1.3E-05 50.3 6.3 73 532-614 19-109 (303)
412 4fs3_A Enoyl-[acyl-carrier-pro 90.0 0.42 1.4E-05 49.0 6.6 73 530-612 4-93 (256)
413 3k31_A Enoyl-(acyl-carrier-pro 89.9 0.45 1.5E-05 49.8 6.9 72 532-613 31-116 (296)
414 4f6c_A AUSA reductase domain p 89.9 0.38 1.3E-05 53.0 6.6 71 532-614 70-159 (427)
415 2p4h_X Vestitone reductase; NA 89.9 0.19 6.5E-06 52.8 4.0 71 532-613 2-82 (322)
416 1w6u_A 2,4-dienoyl-COA reducta 89.9 0.38 1.3E-05 50.2 6.3 73 532-614 27-113 (302)
417 4fb5_A Probable oxidoreductase 89.9 1.1 3.6E-05 48.5 10.1 118 532-659 26-152 (393)
418 3ftp_A 3-oxoacyl-[acyl-carrier 89.9 0.56 1.9E-05 48.4 7.5 71 533-613 30-113 (270)
419 4gek_A TRNA (CMO5U34)-methyltr 89.9 0.56 1.9E-05 48.3 7.4 89 532-636 72-175 (261)
420 3gaf_A 7-alpha-hydroxysteroid 89.9 0.41 1.4E-05 48.9 6.4 72 532-613 13-97 (256)
421 3qy9_A DHPR, dihydrodipicolina 89.8 1.1 3.6E-05 45.9 9.3 132 533-704 5-141 (243)
422 2rhc_B Actinorhodin polyketide 89.8 0.4 1.4E-05 49.6 6.3 72 532-613 23-107 (277)
423 3tfo_A Putative 3-oxoacyl-(acy 89.8 0.34 1.2E-05 50.0 5.7 72 532-613 5-89 (264)
424 2gdz_A NAD+-dependent 15-hydro 89.8 0.39 1.3E-05 49.2 6.2 73 532-614 8-95 (267)
425 3ioy_A Short-chain dehydrogena 89.8 0.36 1.2E-05 51.3 6.0 73 532-614 9-96 (319)
426 3v8b_A Putative dehydrogenase, 89.8 0.42 1.5E-05 49.7 6.5 72 532-613 29-113 (283)
427 3hdv_A Response regulator; PSI 89.7 1 3.5E-05 40.1 8.4 97 563-660 6-111 (136)
428 3nrc_A Enoyl-[acyl-carrier-pro 89.7 0.52 1.8E-05 48.8 7.1 72 532-613 27-111 (280)
429 3tpc_A Short chain alcohol deh 89.7 0.31 1.1E-05 49.7 5.4 72 532-613 8-89 (257)
430 2j48_A Two-component sensor ki 89.7 0.51 1.8E-05 40.5 6.1 94 565-660 2-102 (119)
431 1gee_A Glucose 1-dehydrogenase 89.7 0.33 1.1E-05 49.4 5.5 72 532-613 8-93 (261)
432 1sny_A Sniffer CG10964-PA; alp 89.7 0.35 1.2E-05 49.4 5.7 73 532-614 22-111 (267)
433 2dwc_A PH0318, 433AA long hypo 89.7 0.37 1.3E-05 53.3 6.3 110 531-654 19-135 (433)
434 1yzh_A TRNA (guanine-N(7)-)-me 89.7 2.1 7.2E-05 42.0 11.3 96 532-641 43-158 (214)
435 3evn_A Oxidoreductase, GFO/IDH 89.6 0.36 1.2E-05 51.4 5.9 109 532-657 6-123 (329)
436 3rih_A Short chain dehydrogena 89.6 0.48 1.6E-05 49.7 6.7 72 533-614 43-128 (293)
437 2z1m_A GDP-D-mannose dehydrata 89.6 0.19 6.5E-06 53.2 3.7 73 532-614 4-84 (345)
438 1ja9_A 4HNR, 1,3,6,8-tetrahydr 89.6 0.39 1.3E-05 49.1 6.0 72 532-613 22-107 (274)
439 2q1w_A Putative nucleotide sug 89.5 0.14 4.8E-06 54.4 2.6 73 532-614 22-98 (333)
440 3c7a_A Octopine dehydrogenase; 89.5 0.63 2.1E-05 51.0 7.9 71 533-617 4-94 (404)
441 3f1l_A Uncharacterized oxidore 89.5 0.55 1.9E-05 47.8 7.0 72 532-613 13-100 (252)
442 3oz2_A Digeranylgeranylglycero 89.5 0.16 5.6E-06 54.5 3.1 56 533-605 6-61 (397)
443 3grp_A 3-oxoacyl-(acyl carrier 89.5 0.53 1.8E-05 48.5 6.9 73 532-614 28-110 (266)
444 1piw_A Hypothetical zinc-type 89.4 0.38 1.3E-05 52.0 5.9 73 531-615 180-253 (360)
445 3rwb_A TPLDH, pyridoxal 4-dehy 89.4 0.34 1.2E-05 49.2 5.3 73 532-614 7-89 (247)
446 3upl_A Oxidoreductase; rossman 89.4 0.51 1.7E-05 52.5 7.0 94 531-637 23-137 (446)
447 1rjw_A ADH-HT, alcohol dehydro 89.4 0.59 2E-05 49.9 7.4 74 531-616 165-241 (339)
448 1pl8_A Human sorbitol dehydrog 89.3 0.83 2.8E-05 49.1 8.6 74 531-616 172-253 (356)
449 4fc7_A Peroxisomal 2,4-dienoyl 89.3 0.56 1.9E-05 48.5 7.0 73 532-614 28-114 (277)
450 3h8v_A Ubiquitin-like modifier 89.3 0.96 3.3E-05 47.5 8.8 90 531-630 36-162 (292)
451 2uvd_A 3-oxoacyl-(acyl-carrier 89.3 0.44 1.5E-05 48.2 6.1 73 532-614 5-91 (246)
452 1gpj_A Glutamyl-tRNA reductase 89.3 0.28 9.7E-06 54.1 4.9 70 531-616 167-238 (404)
453 3kkj_A Amine oxidase, flavin-c 89.3 0.24 8.1E-06 49.0 3.9 34 532-575 3-36 (336)
454 2d1y_A Hypothetical protein TT 89.3 0.47 1.6E-05 48.4 6.2 70 532-613 7-85 (256)
455 3ado_A Lambda-crystallin; L-gu 89.3 0.31 1.1E-05 52.0 5.0 41 530-580 5-45 (319)
456 1rpn_A GDP-mannose 4,6-dehydra 89.2 0.24 8.3E-06 52.3 4.2 75 530-614 13-95 (335)
457 1ydw_A AX110P-like protein; st 89.2 1.2 4E-05 48.1 9.7 108 532-656 7-126 (362)
458 3to5_A CHEY homolog; alpha(5)b 89.2 1.3 4.5E-05 40.7 8.7 99 562-660 10-117 (134)
459 3hv2_A Response regulator/HD d 89.2 1.7 6E-05 39.7 9.7 96 564-660 14-117 (153)
460 3ax6_A Phosphoribosylaminoimid 89.2 0.42 1.4E-05 51.9 6.2 69 533-614 3-71 (380)
461 3cg0_A Response regulator rece 89.2 1.1 3.9E-05 40.0 8.2 97 562-659 7-111 (140)
462 3moi_A Probable dehydrogenase; 89.2 1.1 3.6E-05 49.0 9.4 109 533-659 4-122 (387)
463 2d4a_B Malate dehydrogenase; a 89.2 2 6.8E-05 45.4 11.2 132 533-682 1-164 (308)
464 3don_A Shikimate dehydrogenase 89.2 0.21 7E-06 52.3 3.4 112 531-661 117-234 (277)
465 3zv4_A CIS-2,3-dihydrobiphenyl 89.1 0.58 2E-05 48.5 7.0 72 532-613 6-87 (281)
466 4ibo_A Gluconate dehydrogenase 89.1 0.36 1.2E-05 49.9 5.3 75 530-614 24-112 (271)
467 1rkx_A CDP-glucose-4,6-dehydra 89.1 0.19 6.6E-06 53.7 3.3 73 532-614 10-89 (357)
468 3op4_A 3-oxoacyl-[acyl-carrier 89.0 0.6 2.1E-05 47.4 6.9 73 532-614 10-92 (248)
469 3i1j_A Oxidoreductase, short c 89.0 0.62 2.1E-05 47.0 6.9 73 532-614 15-103 (247)
470 3kux_A Putative oxidoreductase 89.0 1.1 3.6E-05 48.2 9.1 108 532-659 8-125 (352)
471 3sju_A Keto reductase; short-c 89.0 0.49 1.7E-05 49.1 6.2 72 532-613 25-109 (279)
472 1oaa_A Sepiapterin reductase; 89.0 0.43 1.5E-05 48.7 5.7 59 532-600 7-77 (259)
473 1iz0_A Quinone oxidoreductase; 88.9 0.69 2.4E-05 48.4 7.4 71 531-615 126-198 (302)
474 3hn7_A UDP-N-acetylmuramate-L- 88.9 0.66 2.2E-05 53.0 7.7 90 531-639 19-111 (524)
475 3fr7_A Putative ketol-acid red 88.8 0.24 8.4E-06 55.4 3.9 71 532-617 55-133 (525)
476 3aw8_A PURK, phosphoribosylami 88.8 0.54 1.9E-05 50.7 6.7 105 533-654 1-110 (369)
477 2yq5_A D-isomer specific 2-hyd 88.8 0.22 7.7E-06 53.6 3.5 79 532-632 149-229 (343)
478 1nvm_B Acetaldehyde dehydrogen 88.7 0.7 2.4E-05 49.1 7.3 94 532-637 5-102 (312)
479 3oid_A Enoyl-[acyl-carrier-pro 88.7 0.56 1.9E-05 48.0 6.4 72 532-613 5-90 (258)
480 3t4x_A Oxidoreductase, short c 88.7 0.61 2.1E-05 47.9 6.7 73 532-614 11-94 (267)
481 4gmf_A Yersiniabactin biosynth 88.7 0.55 1.9E-05 51.2 6.6 112 530-660 6-127 (372)
482 2cuk_A Glycerate dehydrogenase 88.7 0.14 4.7E-06 54.6 1.7 35 532-576 145-179 (311)
483 4egf_A L-xylulose reductase; s 88.6 0.44 1.5E-05 49.0 5.6 73 532-614 21-107 (266)
484 4dry_A 3-oxoacyl-[acyl-carrier 88.6 0.39 1.3E-05 49.9 5.2 72 532-613 34-119 (281)
485 1n7h_A GDP-D-mannose-4,6-dehyd 88.6 0.18 6.3E-06 54.5 2.8 73 532-614 29-115 (381)
486 2d8a_A PH0655, probable L-thre 88.6 1.2 4.1E-05 47.6 9.2 75 531-616 168-247 (348)
487 3o26_A Salutaridine reductase; 88.5 0.45 1.5E-05 49.6 5.6 74 531-614 12-100 (311)
488 1ygy_A PGDH, D-3-phosphoglycer 88.5 0.39 1.3E-05 54.9 5.4 66 531-616 142-207 (529)
489 2ydy_A Methionine adenosyltran 88.4 0.23 7.9E-06 52.0 3.3 65 532-614 3-69 (315)
490 1wdk_A Fatty oxidation complex 88.4 1.2 4E-05 52.9 9.6 40 531-580 314-353 (715)
491 3e05_A Precorrin-6Y C5,15-meth 88.4 2.3 7.8E-05 41.3 10.4 97 531-641 41-144 (204)
492 3hm2_A Precorrin-6Y C5,15-meth 88.3 1.7 5.7E-05 40.9 9.1 95 531-639 26-127 (178)
493 1kjq_A GART 2, phosphoribosylg 88.3 0.62 2.1E-05 50.6 6.8 111 530-654 10-127 (391)
494 4gqa_A NAD binding oxidoreduct 88.3 0.96 3.3E-05 49.7 8.4 116 532-658 27-153 (412)
495 3e82_A Putative oxidoreductase 88.3 1.6 5.4E-05 47.2 9.9 108 532-658 8-124 (364)
496 3s2e_A Zinc-containing alcohol 88.2 0.77 2.6E-05 49.0 7.4 75 531-617 167-244 (340)
497 3dfu_A Uncharacterized protein 88.2 0.39 1.3E-05 48.7 4.7 113 531-661 6-134 (232)
498 3ctm_A Carbonyl reductase; alc 88.2 0.35 1.2E-05 49.9 4.5 72 532-613 35-119 (279)
499 1r6d_A TDP-glucose-4,6-dehydra 88.2 0.54 1.8E-05 49.7 6.1 71 533-614 2-85 (337)
500 2i99_A MU-crystallin homolog; 88.1 0.36 1.2E-05 51.3 4.5 70 531-615 135-206 (312)
No 1
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=99.93 E-value=4.4e-26 Score=249.30 Aligned_cols=205 Identities=18% Similarity=0.160 Sum_probs=174.0
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
++|++|||+|++|+.+++.|. +.|+ |+++|.|+++++ +++.+.++++||++|+++|+++|+++||+++
T Consensus 115 ~~~viI~G~G~~g~~l~~~L~----------~~g~-v~vid~~~~~~~-~~~~~~~~i~gd~~~~~~L~~a~i~~a~~vi 182 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLRELR----------GSEV-FVLAEDENVRKK-VLRSGANFVHGDPTRVSDLEKANVRGARAVI 182 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTGG----------GSCE-EEEESCGGGHHH-HHHTTCEEEESCTTSHHHHHHTCSTTEEEEE
T ss_pred cCCEEEECCcHHHHHHHHHHH----------hCCc-EEEEeCChhhhh-HHhCCcEEEEeCCCCHHHHHhcChhhccEEE
Confidence 679999999999999999998 7899 999999999999 9889999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHhhcCCChHHHHHHHHHHh
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQLVR 690 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~~l~~~~~~~~~l~~~~~ 690 (791)
+++++|+.|+.+++.+|+++|+.+++||++++++.+.++++|+|.|++|+.+++.++++.+.. |+..+.++++++
T Consensus 183 ~~~~~d~~n~~~~~~ar~~~~~~~iiar~~~~~~~~~l~~~G~d~vi~~~~~~~~~l~~~~~~-----~~~~~~~~~~~~ 257 (336)
T 1lnq_A 183 VDLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDD-----GYEAMFVQDVLA 257 (336)
T ss_dssp ECCSSHHHHHHHHHHHHTTCTTSEEEEECSSGGGHHHHHHTTCSEEECHHHHHHHHHHHTSSC-----SHHHHHHHHHTS
T ss_pred EcCCccHHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHHHcCCCEEEChhHhHHHHHHHHHhC-----ccHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999999999999999999998877 665555545656
Q ss_pred cccccceeeeecCCCc-hhhcccccCCcc------hhhhhhccCCCCCCCCccccccCCCCCCCCCCCCceeeeeccCC
Q 003861 691 NSMEIQAQEVLSQKDD-QEFDIMKPLQVR------VADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELNGT 762 (791)
Q Consensus 691 ~~~~~~~~e~~~~~~~-~~~~~~~~~~i~------~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~gd~~l~~~~~~~ 762 (791)
..++..+.|+.++.+. ..++++++++.+ +..+.| +++....|++++++++||++.+.+.+..
T Consensus 258 ~~~~~~l~e~~v~~~s~~~Gk~l~el~l~~~~~~~ii~i~r----------~~~~~~~P~~~~~l~~gD~liv~g~~~~ 326 (336)
T 1lnq_A 258 EESTRRMVEVPIPEGSKLEGVSVLDADIHDVTGVIIIGVGR----------GDELIIDPPRDYSFRAGDIILGIGKPEE 326 (336)
T ss_dssp SCSSCEEEEEECCSSCSSTTCBHHHHCHHHHHCCEEEEEEC----------SSCEESSCCTTCBCCSSCEEEEEECHHH
T ss_pred CcCCceEEEEEeCCCCCcCCCCHHHcccccccCeEEEEEEE----------CCEEEECcCCCcEEcCCCEEEEEECHHH
Confidence 5557888888876542 355666555433 222332 2334445999999999999999987654
No 2
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=99.93 E-value=2.4e-24 Score=251.74 Aligned_cols=205 Identities=15% Similarity=0.189 Sum_probs=128.5
Q ss_pred cCCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhcCCCCCc
Q 003861 529 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 529 ~~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
..++|++|||+|++|+.+++.|. +.|++|++||.|+++++++++. +.++++||++++++|+++|+++|+
T Consensus 125 ~~~~hviI~G~g~~g~~la~~L~----------~~~~~vvvid~~~~~~~~~~~~~~~~~i~Gd~~~~~~L~~a~i~~a~ 194 (565)
T 4gx0_A 125 DTRGHILIFGIDPITRTLIRKLE----------SRNHLFVVVTDNYDQALHLEEQEGFKVVYGSPTDAHVLAGLRVAAAR 194 (565)
T ss_dssp TCCSCEEEESCCHHHHHHHHHTT----------TTTCCEEEEESCHHHHHHHHHSCSSEEEESCTTCHHHHHHTTGGGCS
T ss_pred ccCCeEEEECCChHHHHHHHHHH----------HCCCCEEEEECCHHHHHHHHHhcCCeEEEeCCCCHHHHHhcCcccCC
Confidence 57899999999999999999998 8999999999999999999998 999999999999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 003861 608 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQ 687 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~~l~~~~~~~~~l~~ 687 (791)
++++ +.+|+.|+.+++++|+++ +.+|+||++++++.+.|+++|||+|++|+.+++..+++.+.. |... .+
T Consensus 195 ~vi~-t~~D~~n~~~~~~ar~~~-~~~iiar~~~~~~~~~l~~~Gad~vi~p~~~~~~~la~~~~~-----p~~~---~~ 264 (565)
T 4gx0_A 195 SIIA-NLSDPDNANLCLTVRSLC-QTPIIAVVKEPVHGELLRLAGANQVVPLTRILGRYLGIRATT-----CGAL---AH 264 (565)
T ss_dssp EEEE-CSCHHHHHHHHHHHHTTC-CCCEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHHHHC--------------
T ss_pred EEEE-eCCcHHHHHHHHHHHHhc-CceEEEEECCHHHHHHHHHcCCCEEEChHHHHHHHHHHHhcc-----cccc---cc
Confidence 9987 888999999999999999 899999999999999999999999999999999999999987 5443 12
Q ss_pred HHhcccccceeeeecCCCchhhcccccCCcc------hhhhhhccCCCCCCCCccccccCCCCCCCCCCCCceeeeeccC
Q 003861 688 LVRNSMEIQAQEVLSQKDDQEFDIMKPLQVR------VADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELNG 761 (791)
Q Consensus 688 ~~~~~~~~~~~e~~~~~~~~~~~~~~~~~i~------~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~gd~~l~~~~~~ 761 (791)
.+...++..+.|+.++.....++++++++.+ +..+.| +++.. .|++++++++||.+++.|.+.
T Consensus 265 ~~~~~~~~~l~e~~v~~s~l~G~~l~el~~~~~~~~~vi~i~r----------~g~~~-~p~~~~~l~~GD~L~v~g~~~ 333 (565)
T 4gx0_A 265 ILDSFGNLQIAELPVHGTPFAGKTIGESGIRQRTGLSIIGVWE----------RGSLT-TPQRETVLTEQSLLVLAGTKS 333 (565)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhcccCCceEEEEEECCCccCCCCHHHcCcchhcCCEEEEEEE----------CCEEe-CCCCCcEeCCCCEEEEEeCHH
Confidence 2234567778888776222355555554332 223332 34455 899999999999999999887
Q ss_pred CCC
Q 003861 762 TNN 764 (791)
Q Consensus 762 ~~~ 764 (791)
.-.
T Consensus 334 ~l~ 336 (565)
T 4gx0_A 334 QLA 336 (565)
T ss_dssp ---
T ss_pred HHH
Confidence 655
No 3
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=99.92 E-value=9.8e-25 Score=226.22 Aligned_cols=208 Identities=18% Similarity=0.154 Sum_probs=170.6
Q ss_pred cCCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 529 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 529 ~~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
+.++|++|||+|++|+.+++.|. +.|+ |+++|.|+++++.++ .+..+++||++|+++|+++++++||.
T Consensus 7 ~~~~~viI~G~G~~G~~la~~L~----------~~g~-v~vid~~~~~~~~~~-~~~~~i~gd~~~~~~l~~a~i~~ad~ 74 (234)
T 2aef_A 7 AKSRHVVICGWSESTLECLRELR----------GSEV-FVLAEDENVRKKVLR-SGANFVHGDPTRVSDLEKANVRGARA 74 (234)
T ss_dssp ---CEEEEESCCHHHHHHHHHST----------TSEE-EEEESCGGGHHHHHH-TTCEEEESCTTCHHHHHHTTCTTCSE
T ss_pred CCCCEEEEECCChHHHHHHHHHH----------hCCe-EEEEECCHHHHHHHh-cCCeEEEcCCCCHHHHHhcCcchhcE
Confidence 45789999999999999999998 7899 999999999999888 88999999999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHhhcCCChHHHHHHHHH
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQL 688 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~~l~~~~~~~~~l~~~ 688 (791)
+++++++|+.|+.+++.+|+++|+++|+++++++++.+.++++|+|.|++|+.++|..+++.+.. |...+.++++
T Consensus 75 vi~~~~~d~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~l~~~G~~~vi~p~~~~a~~l~~~~~~-----~~~~~~~~~~ 149 (234)
T 2aef_A 75 VIVDLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGADQVISPFVISGRLMSRSIDD-----GYEAMFVQDV 149 (234)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCSSSEEEEECSSGGGHHHHHHHTCSEEECHHHHHHHHHHHTSSC-----SHHHHHHHHH
T ss_pred EEEcCCCcHHHHHHHHHHHHHCCCCeEEEEECCHhHHHHHHHCCCCEEECHHHHHHHHHHHHHcC-----ccHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988877 6655555355
Q ss_pred HhcccccceeeeecCCCc-hhhcccccCCcc------hhhhhhccCCCCCCCCccccccCCCCCCCCCCCCceeeeeccC
Q 003861 689 VRNSMEIQAQEVLSQKDD-QEFDIMKPLQVR------VADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELNG 761 (791)
Q Consensus 689 ~~~~~~~~~~e~~~~~~~-~~~~~~~~~~i~------~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~gd~~l~~~~~~ 761 (791)
++..++..+.|+.++... ..++++++++.+ +..+.| +++....|++++++++||.++++|...
T Consensus 150 ~~~~~~~~~~e~~V~~~s~~~Gk~l~el~~~~~~~~~vi~i~R----------~~~~~~~p~~~~~l~~GD~l~v~g~~~ 219 (234)
T 2aef_A 150 LAEESTRRMVEVPIPEGSKLEGVSVLDADIHDVTGVIIIGVGR----------GDELIIDPPRDYSFRAGDIILGIGKPE 219 (234)
T ss_dssp HC---CCEEEEEECCTTBTTTTCBHHHHCHHHHHCCEEEEEEE----------TTEEEESCCTTCBCCTTCEEEEEECHH
T ss_pred hcCCCCceEEEEEECCCCccCCCCHHHhhhhhhcCeEEEEEEE----------CCeEEeCCCCCCEECCCCEEEEEECHH
Confidence 554446777788776542 345555554332 223333 233334599999999999999999876
Q ss_pred CC
Q 003861 762 TN 763 (791)
Q Consensus 762 ~~ 763 (791)
.-
T Consensus 220 ~l 221 (234)
T 2aef_A 220 EI 221 (234)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 4
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=99.91 E-value=7.1e-24 Score=202.28 Aligned_cols=135 Identities=21% Similarity=0.316 Sum_probs=130.3
Q ss_pred cCCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 529 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 529 ~~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
+.++|++|||+|++|+.+++.|. +.|++|+++|.|+++++.+++.|.++++||++++++|+++|+++||.
T Consensus 5 ~~~~~viIiG~G~~G~~la~~L~----------~~g~~v~vid~~~~~~~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~ 74 (140)
T 3fwz_A 5 DICNHALLVGYGRVGSLLGEKLL----------ASDIPLVVIETSRTRVDELRERGVRAVLGNAANEEIMQLAHLECAKW 74 (140)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHH----------HTTCCEEEEESCHHHHHHHHHTTCEEEESCTTSHHHHHHTTGGGCSE
T ss_pred cCCCCEEEECcCHHHHHHHHHHH----------HCCCCEEEEECCHHHHHHHHHcCCCEEECCCCCHHHHHhcCcccCCE
Confidence 57899999999999999999998 88999999999999999999999999999999999999999999999
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHh
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 673 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~ 673 (791)
+|+++++|+.|..++..+|+++|+.+|++|++++++.+.|+++|+|.|++|+.+++.++++.+.+
T Consensus 75 vi~~~~~~~~n~~~~~~a~~~~~~~~iiar~~~~~~~~~l~~~G~d~vi~p~~~~a~~i~~~l~~ 139 (140)
T 3fwz_A 75 LILTIPNGYEAGEIVASARAKNPDIEIIARAHYDDEVAYITERGANQVVMGEREIARTMLELLET 139 (140)
T ss_dssp EEECCSCHHHHHHHHHHHHHHCSSSEEEEEESSHHHHHHHHHTTCSEEEEHHHHHHHHHHHHHHC
T ss_pred EEEECCChHHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHHHCCCCEEECchHHHHHHHHHHhhC
Confidence 99999999999999999999999999999999999999999999999999999999999988764
No 5
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=99.91 E-value=1.1e-23 Score=235.93 Aligned_cols=158 Identities=28% Similarity=0.459 Sum_probs=149.8
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
.++||+|||+|++|+.+++.|. +.|++|++||.|+++++.+++.|.++++||++++++|+++|+++|+++
T Consensus 3 ~~~~viIiG~Gr~G~~va~~L~----------~~g~~vvvId~d~~~v~~~~~~g~~vi~GDat~~~~L~~agi~~A~~v 72 (413)
T 3l9w_A 3 HGMRVIIAGFGRFGQITGRLLL----------SSGVKMVVLDHDPDHIETLRKFGMKVFYGDATRMDLLESAGAAKAEVL 72 (413)
T ss_dssp -CCSEEEECCSHHHHHHHHHHH----------HTTCCEEEEECCHHHHHHHHHTTCCCEESCTTCHHHHHHTTTTTCSEE
T ss_pred CCCeEEEECCCHHHHHHHHHHH----------HCCCCEEEEECCHHHHHHHHhCCCeEEEcCCCCHHHHHhcCCCccCEE
Confidence 4679999999999999999998 899999999999999999999999999999999999999999999999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHhhcCCChHHHHHHHHHH
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQLV 689 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~~l~~~~~~~~~l~~~~ 689 (791)
|+++++|+.|+.++..+|+++|+++|+||++++++...|+++|||.||.|+.++|.+++++++..+|+++..++...+.+
T Consensus 73 iv~~~~~~~n~~i~~~ar~~~p~~~Iiara~~~~~~~~L~~~Gad~Vi~~~~~~a~~la~~~L~~lg~~~~~~~~~~~~~ 152 (413)
T 3l9w_A 73 INAIDDPQTNLQLTEMVKEHFPHLQIIARARDVDHYIRLRQAGVEKPERETFEGALKTGRLALESLGLGPYEARERADVF 152 (413)
T ss_dssp EECCSSHHHHHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHTTCSSCEETTHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred EECCCChHHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999888888
Q ss_pred hcccccce
Q 003861 690 RNSMEIQA 697 (791)
Q Consensus 690 ~~~~~~~~ 697 (791)
|..++..+
T Consensus 153 r~~~~~~~ 160 (413)
T 3l9w_A 153 RRFNIQMV 160 (413)
T ss_dssp HHHHHHHH
T ss_pred HHhHHHHH
Confidence 76544333
No 6
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=99.90 E-value=4.4e-24 Score=218.94 Aligned_cols=201 Identities=17% Similarity=0.157 Sum_probs=168.2
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++|||+|++|+.+++.|. +.|++|+++|.|+++++++.+ .+..+++||++++++|+++++++||.+++
T Consensus 2 ~iiIiG~G~~G~~la~~L~----------~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 2 KVIIIGGETTAYYLARSML----------SRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CEEEECCHHHHHHHHHHHH----------HTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 6899999999999999998 789999999999999998764 68999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHhhcCCChHHHHHHHHHHhc
Q 003861 612 MYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQLVRN 691 (791)
Q Consensus 612 ~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~~l~~~~~~~~~l~~~~~~ 691 (791)
++++|+.|..++..+|+.+|..++++|++++++.+.|+++|+|.|++|+.+++..+++.+.. |+..+.+ ..
T Consensus 72 ~~~~d~~n~~~~~~a~~~~~~~~iia~~~~~~~~~~l~~~G~d~vi~p~~~~~~~l~~~~~~-----~~~~~~~----~~ 142 (218)
T 3l4b_C 72 LTPRDEVNLFIAQLVMKDFGVKRVVSLVNDPGNMEIFKKMGITTVLNLTTLITNTVEALIFP-----DEFSSII----PL 142 (218)
T ss_dssp CCSCHHHHHHHHHHHHHTSCCCEEEECCCSGGGHHHHHHHTCEECCCHHHHHHHHHHHHHCT-----TSCEECS----CC
T ss_pred ecCCcHHHHHHHHHHHHHcCCCeEEEEEeCcchHHHHHHCCCCEEECHHHHHHHHHHHHhcc-----CCceEEE----Ee
Confidence 99999999999999999999999999999999999999999999999999999999988866 4333322 23
Q ss_pred ccccceeeeecCCCc-hhhcccccCCcc----hhhhhhccCCCCCCCCccccccCCCCCCCCCCCCceeeeeccCCC
Q 003861 692 SMEIQAQEVLSQKDD-QEFDIMKPLQVR----VADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELNGTN 763 (791)
Q Consensus 692 ~~~~~~~e~~~~~~~-~~~~~~~~~~i~----~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~gd~~l~~~~~~~~ 763 (791)
.++..+.|+.++.+. +.++++++++.+ +..+.| +++.. .|++++++++||.++..|.+..-
T Consensus 143 ~~~~~~~e~~v~~~s~~~gk~l~el~~~~~~~i~~i~R----------~~~~~-~p~~~~~l~~gD~l~v~g~~~~~ 208 (218)
T 3l4b_C 143 EQGIEFLSVNVEEDSPVVGKKLKDLPLPRDSIIAAIVR----------GGVLV-VPRGDTEILSGDKLYVIVSAEAK 208 (218)
T ss_dssp STTEEEEEEECCTTCSSTTCBTTTSCCCTTEEEEEEEE----------SSCEE-CCCTTCBCCTTEEEEEEEEGGGH
T ss_pred CCCcEEEEEEECCCCcccCCCHHHCCCCCCcEEEEEEE----------CCEEE-cCCCCCEECCCCEEEEEECHHHH
Confidence 334788888876543 456666665543 223333 23333 49999999999999999987653
No 7
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=99.88 E-value=3.5e-23 Score=235.23 Aligned_cols=203 Identities=16% Similarity=0.163 Sum_probs=161.4
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
|++|||+|++|+.+|+.|. ++|++|++||.|+++++++.+ .+..+++||++++++|++||+++||++|+
T Consensus 5 ~iiI~G~G~vG~~la~~L~----------~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia 74 (461)
T 4g65_A 5 KIIILGAGQVGGTLAENLV----------GENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVA 74 (461)
T ss_dssp EEEEECCSHHHHHHHHHTC----------STTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHH----------HCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEE
Confidence 7999999999999999998 899999999999999999875 69999999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHH------HCCCCeEEcCcHHHHHHHHHHHHhhcCCChHHHHHH
Q 003861 612 MYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLK------KAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFL 685 (791)
Q Consensus 612 ~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~------~~Gad~Vi~p~~~~~~~la~~~l~~l~~~~~~~~~l 685 (791)
+|++|+.|+.+|+.||++||..+++||++++++.+..+ ..|+|.+|+|+.+++..+.+.+.. |+..+..
T Consensus 75 ~t~~De~Nl~~~~~Ak~~~~~~~~iar~~~~~~~~~~~~l~~~~~~giD~iIsPe~~~a~~I~~~i~~-----p~~~~~~ 149 (461)
T 4g65_A 75 VTNTDETNMAACQVAFTLFNTPNRIARIRSPQYLAQKEALFKSGAIPVDHLIAPEELVTSYIERLIQY-----PGALQVV 149 (461)
T ss_dssp CCSCHHHHHHHHHHHHHHHCCSSEEEECCCHHHHTTHHHHTTTSSSCCSEEECHHHHHHHHHHHHHTS-----TTCSEEE
T ss_pred EcCChHHHHHHHHHHHHhcCCccceeEeccchhhhhhhhhhhcccCCcceeecHHHHHHHHHHHhccC-----CCeEEEE
Confidence 99999999999999999999999999999998753322 379999999999998888877765 4332221
Q ss_pred HHHHhcccccceeeeecCCCc-hhhcccc-------cCCcchhhhhhccCCCCCCCCccccccCCCCCCCCCCCCceeee
Q 003861 686 RQLVRNSMEIQAQEVLSQKDD-QEFDIMK-------PLQVRVADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYC 757 (791)
Q Consensus 686 ~~~~~~~~~~~~~e~~~~~~~-~~~~~~~-------~~~i~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~gd~~l~~ 757 (791)
. -.++..++.++..+.+. ..++.++ +.+.++..+.| +.-...|++++.+++||.+.+.
T Consensus 150 ~---f~~g~~~l~e~~v~~~s~l~g~~l~~l~~~~p~~~~~I~aI~R-----------~g~~iiP~g~t~i~~gD~v~~i 215 (461)
T 4g65_A 150 S---FAEEKVSLVAVKAYYGGPLVGNALSALREHMPHIDTRVAAIFR-----------QGRPIRPQGTTIIEADDEVFFV 215 (461)
T ss_dssp E---ETTTTEEEEEEECCTTSSSTTCBHHHHHHTSTTSCEEEEEEEE-----------TTEEECCCTTCBCCTTCEEEEE
T ss_pred E---eccceEEEEEEEecCCCeecCCcHHHHHhhCCCCceEEEEEEE-----------CCeeccCCCCceecCCCEEEEE
Confidence 0 12466788888776433 1222222 12233333333 2334779999999999999998
Q ss_pred eccCCCC
Q 003861 758 ELNGTNN 764 (791)
Q Consensus 758 ~~~~~~~ 764 (791)
+....-+
T Consensus 216 ~~~~~i~ 222 (461)
T 4g65_A 216 AASNHIR 222 (461)
T ss_dssp EETTTHH
T ss_pred eccchHH
Confidence 8776544
No 8
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=99.88 E-value=2.3e-23 Score=243.41 Aligned_cols=198 Identities=19% Similarity=0.228 Sum_probs=123.7
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+|++|||+|++|+.+++.|. +.|++|++||.|+++++++. ++++||++|+++|+++|+++||++|+
T Consensus 349 ~~viIiG~G~~G~~la~~L~----------~~g~~v~vid~d~~~~~~~~----~~i~gD~t~~~~L~~agi~~ad~vi~ 414 (565)
T 4gx0_A 349 ELIFIIGHGRIGCAAAAFLD----------RKPVPFILIDRQESPVCNDH----VVVYGDATVGQTLRQAGIDRASGIIV 414 (565)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HTTCCEEEEESSCCSSCCSS----CEEESCSSSSTHHHHHTTTSCSEEEE
T ss_pred CCEEEECCCHHHHHHHHHHH----------HCCCCEEEEECChHHHhhcC----CEEEeCCCCHHHHHhcCccccCEEEE
Confidence 89999999999999999998 89999999999999987653 89999999999999999999999999
Q ss_pred EeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHhhcCCChHHHHHHHHHHhc
Q 003861 612 MYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQLVRN 691 (791)
Q Consensus 612 ~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~~l~~~~~~~~~l~~~~~~ 691 (791)
++++|+.|+.+++.+|+++|+++|+||++++++.+.++++|||+||+|+.+++.++++.+.. ++..+.
T Consensus 415 ~~~~d~~ni~~~~~ak~l~~~~~iiar~~~~~~~~~l~~~G~d~vi~p~~~~~~~i~~~~~~-----~~~~~~------- 482 (565)
T 4gx0_A 415 TTNDDSTNIFLTLACRHLHSHIRIVARANGEENVDQLYAAGADFVVSNASVGANILGNLLEH-----KESAFL------- 482 (565)
T ss_dssp CCSCHHHHHHHHHHHHHHCSSSEEEEEESSTTSHHHHHHHTCSEEEEHHHHHHHHHHHHHHC-----C------------
T ss_pred ECCCchHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEccchHHHHHHHHHhcc-----hhhhhh-------
Confidence 99999999999999999999999999999999999999999999999999999999998875 433221
Q ss_pred ccccceeeeecCCCchhhcccccCCc------chhhhhhccCCCCCCCCccccccCCCCCCCCCCCCceeeeeccCCCC
Q 003861 692 SMEIQAQEVLSQKDDQEFDIMKPLQV------RVADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELNGTNN 764 (791)
Q Consensus 692 ~~~~~~~e~~~~~~~~~~~~~~~~~i------~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~gd~~l~~~~~~~~~ 764 (791)
.+++...++..+ ....+++++++++ ++..++|++ +++...-|++++++++||.++..|.+..-+
T Consensus 483 ~~~~~~~~v~~~-s~~~Gk~l~el~l~~~~~~~v~aI~R~~--------~~~~~~~p~~~~~l~~GD~liv~g~~~~i~ 552 (565)
T 4gx0_A 483 SEGMAVFRRPLP-PAMAGKTIAETRLRPLTGCSIVAIEAPD--------RADILISPPPETILAEGARLILIGTSEQEK 552 (565)
T ss_dssp -------------------------------------------------------------------------------
T ss_pred hcCeEEEEEcCC-CCcCCCCHHHcchhhhcCCEEEEEEeCC--------CCceEECcCCCCEECCCCEEEEEECHHHHH
Confidence 223444444433 2235666666543 344444431 134444599999999999999999876554
No 9
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=99.85 E-value=1.8e-20 Score=178.35 Aligned_cols=132 Identities=18% Similarity=0.219 Sum_probs=127.5
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+|++|+|+|++|+.+++.|. +.|++|+++|.|+++++.+++.+.++++||++|++.|++++++++|.++
T Consensus 6 ~~~v~I~G~G~iG~~la~~L~----------~~g~~V~~id~~~~~~~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi 75 (141)
T 3llv_A 6 RYEYIVIGSEAAGVGLVRELT----------AAGKKVLAVDKSKEKIELLEDEGFDAVIADPTDESFYRSLDLEGVSAVL 75 (141)
T ss_dssp CCSEEEECCSHHHHHHHHHHH----------HTTCCEEEEESCHHHHHHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCeEEEEECCHHHHHHHHHCCCcEEECCCCCHHHHHhCCcccCCEEE
Confidence 468999999999999999998 7899999999999999999999999999999999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHh
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 673 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~ 673 (791)
+++++++.|..++..+|+.+ ..+++++++++++.+.|+++|+|.|++|+.++|.++++.+.+
T Consensus 76 ~~~~~~~~n~~~~~~a~~~~-~~~iia~~~~~~~~~~l~~~G~~~vi~p~~~~~~~l~~~i~~ 137 (141)
T 3llv_A 76 ITGSDDEFNLKILKALRSVS-DVYAIVRVSSPKKKEEFEEAGANLVVLVADAVKQAFMDKIKK 137 (141)
T ss_dssp ECCSCHHHHHHHHHHHHHHC-CCCEEEEESCGGGHHHHHHTTCSEEEEHHHHHHHHHHHHHHH
T ss_pred EecCCHHHHHHHHHHHHHhC-CceEEEEEcChhHHHHHHHcCCCEEECHHHHHHHHHHHHHhC
Confidence 99999999999999999999 789999999999999999999999999999999999999887
No 10
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=99.84 E-value=2.7e-20 Score=179.95 Aligned_cols=133 Identities=14% Similarity=0.096 Sum_probs=123.2
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCC-hhhHHHHH---hcCCCEEEccCCCHHHHHhcCCCCC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLN-PSVVKESR---KLGFPILYGDASRPAVLLSAGITSP 606 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d-~~~v~~~~---~~~~~~v~GD~t~~~~L~~agi~~a 606 (791)
++|++|||+|++|+.+++.|. +.|++|+++|.| +++.+.+. +.|..+++||++|+++|+++++++|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L~----------~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~a 72 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQLN----------QRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRC 72 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHHH----------HTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTC
T ss_pred CCcEEEECCCHHHHHHHHHHH----------HCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhC
Confidence 579999999999999999998 789999999998 46555543 4589999999999999999999999
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHh
Q 003861 607 KAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 673 (791)
Q Consensus 607 ~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~ 673 (791)
|.+++++++|+.|..+++.+|+++|+.+|+++++++++.+.|+++|+|.|+.|+.+++..+++.+..
T Consensus 73 d~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~~~~~~~~~~~l~~~G~~~vi~p~~~~~~~l~~~~~~ 139 (153)
T 1id1_A 73 RAILALSDNDADNAFVVLSAKDMSSDVKTVLAVSDSKNLNKIKMVHPDIILSPQLFGSEILARVLNG 139 (153)
T ss_dssp SEEEECSSCHHHHHHHHHHHHHHTSSSCEEEECSSGGGHHHHHTTCCSEEECHHHHHHHHHHHHHTT
T ss_pred CEEEEecCChHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEcHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999999999999987764
No 11
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=99.82 E-value=1.9e-20 Score=212.66 Aligned_cols=201 Identities=15% Similarity=0.128 Sum_probs=157.0
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh--cCCCEEEccCCCHHHHHhcCCCCCc
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--LGFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~--~~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
..++++|+|.|+.|..+|+.|. .+++|.+||.|+++++.+.+ .+..+++||+||+++|+++|++++|
T Consensus 234 ~~~~v~I~GgG~ig~~lA~~L~-----------~~~~v~iIE~d~~r~~~la~~l~~~~Vi~GD~td~~~L~ee~i~~~D 302 (461)
T 4g65_A 234 PYRRIMIVGGGNIGASLAKRLE-----------QTYSVKLIERNLQRAEKLSEELENTIVFCGDAADQELLTEENIDQVD 302 (461)
T ss_dssp CCCEEEEECCSHHHHHHHHHHT-----------TTSEEEEEESCHHHHHHHHHHCTTSEEEESCTTCHHHHHHTTGGGCS
T ss_pred cccEEEEEcchHHHHHHHHHhh-----------hcCceEEEecCHHHHHHHHHHCCCceEEeccccchhhHhhcCchhhc
Confidence 4568999999999999999994 56899999999999999876 4688999999999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 003861 608 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQ 687 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~~l~~~~~~~~~l~~ 687 (791)
+++++|+||+.|+.+++.||+++.+ +++|+++++++.+.+++.|+|.+++|+..++..+.+.+.+ ++..+. ..
T Consensus 303 ~~ia~T~~De~Ni~~~llAk~~gv~-kvIa~vn~~~~~~l~~~~gid~visp~~~~a~~I~~~i~~-----~~v~~v-~~ 375 (461)
T 4g65_A 303 VFIALTNEDETNIMSAMLAKRMGAK-KVMVLIQRGAYVDLVQGGVIDVAISPQQATISALLTHVRR-----ADIVNV-SS 375 (461)
T ss_dssp EEEECCSCHHHHHHHHHHHHHTTCS-EEEEECSCHHHHHHHCSSSSCEEECHHHHHHHHHHHHHHH-----TTCCCE-EE
T ss_pred EEEEcccCcHHHHHHHHHHHHcCCc-cccccccccchhhhhhccccceeeCHHHHHHHHHHHHhhc-----cccceE-EE
Confidence 9999999999999999999999865 8999999999999999999999999999999999998887 322111 00
Q ss_pred HHhcccccceeeeecCCC----chhhcccccCC----cchhhhhhccCCCCCCCCccccccCCCCCCCCCCCCcee-eee
Q 003861 688 LVRNSMEIQAQEVLSQKD----DQEFDIMKPLQ----VRVADIVEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVL-YCE 758 (791)
Q Consensus 688 ~~~~~~~~~~~e~~~~~~----~~~~~~~~~~~----i~~~~l~~~~~~~~~~~~~~~~~~~p~~~~~~~~gd~~l-~~~ 758 (791)
+ .+++..+.|+..... ...++.+++++ .++..+.| +++ ...|.+++.+|+||+|. ||.
T Consensus 376 l--~~g~ae~iE~~~~~~~~~S~~vGk~l~dl~lp~g~~I~aI~R----------~~~-~iiP~gdt~i~~gD~vivf~~ 442 (461)
T 4g65_A 376 L--RRGAAEAIEAVAHGDESNSKVVGRAVGDIKLPPGTTIGAIVR----------GEE-VLIAHDRTVIEQDDHVVMFLV 442 (461)
T ss_dssp C--GGGSCEEEEEECCSCGGGCSSTTSBGGGSCCCTTEEEEEEEE----------TTE-EEECCTTCBCCTTCEEEEEES
T ss_pred e--cCCceEEEEEEEecCCCCCccCCcCHHHCCCCCCcEEEEEEE----------CCE-EEcCCCCCEECCCCEEEEEEc
Confidence 0 123344455544211 12344444443 23333444 233 35699999999999975 566
Q ss_pred ccC
Q 003861 759 LNG 761 (791)
Q Consensus 759 ~~~ 761 (791)
...
T Consensus 443 ~~~ 445 (461)
T 4g65_A 443 DKK 445 (461)
T ss_dssp CGG
T ss_pred CHH
Confidence 543
No 12
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.82 E-value=1.6e-19 Score=179.57 Aligned_cols=137 Identities=20% Similarity=0.234 Sum_probs=129.9
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCC-CCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhc-CCCCCc
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTV-GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSA-GITSPK 607 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~-g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~a-gi~~a~ 607 (791)
..+|++|||+|++|+.+++.|. +. |++|+++|.|+++++.+++.|..+++||++++++|+++ +++++|
T Consensus 38 ~~~~v~IiG~G~~G~~~a~~L~----------~~~g~~V~vid~~~~~~~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad 107 (183)
T 3c85_A 38 GHAQVLILGMGRIGTGAYDELR----------ARYGKISLGIEIREEAAQQHRSEGRNVISGDATDPDFWERILDTGHVK 107 (183)
T ss_dssp TTCSEEEECCSHHHHHHHHHHH----------HHHCSCEEEEESCHHHHHHHHHTTCCEEECCTTCHHHHHTBCSCCCCC
T ss_pred CCCcEEEECCCHHHHHHHHHHH----------hccCCeEEEEECCHHHHHHHHHCCCCEEEcCCCCHHHHHhccCCCCCC
Confidence 3569999999999999999998 78 99999999999999999999999999999999999999 999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHhhcC
Q 003861 608 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFG 676 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~~l~ 676 (791)
.+|+++++++.|..++..+|+.+|+.+|+++++++++.+.+++.|+|.++.|+.++|..+++.+++.++
T Consensus 108 ~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~l~~~G~~~vi~p~~~~a~~l~~~~~~~~~ 176 (183)
T 3c85_A 108 LVLLAMPHHQGNQTALEQLQRRNYKGQIAAIAEYPDQLEGLLESGVDAAFNIYSEAGSGFARHVCKQLE 176 (183)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHTCSEEEEHHHHHHHHHHHHHHHHHC
T ss_pred EEEEeCCChHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHcCCCEEEchHHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999988544
No 13
>1zcd_A Na(+)/H(+) antiporter 1; membrane protein; 3.45A {Escherichia coli} PDB: 3fi1_A
Probab=99.78 E-value=7.7e-20 Score=200.10 Aligned_cols=295 Identities=19% Similarity=0.181 Sum_probs=209.8
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCChHHH----HHhhh--HHHHHHHHHHHHHHHHHHHhhCCCCCcchhhHHHHhhccccc
Q 003861 159 TDVKVLSEWGILFLLFEMGLELSLARL----KALAK--FAFGMGLTQVVLSTLAFTAFELPPNGAVGTRILEFLFHSRSD 232 (791)
Q Consensus 159 ~~l~~l~elgl~~lLF~~Gleldl~~L----k~~~~--~~~~la~~~~llt~~~~~~~~~p~~~~lG~~~~~~l~g~~~~ 232 (791)
+....+.+-.+.+++|.+|+|+|.+.+ ++.+| .....+..++++|+++. +.++
T Consensus 58 ~l~~windglm~lFff~vGLEik~e~l~G~L~~~~~a~~p~~aAlgGmivP~~iy-----------------~~~~---- 116 (388)
T 1zcd_A 58 NMLLWINDALMAVFFLLVGLEVKRELMQGSLASLRQAAFPVIAAIGGMIVPALLY-----------------LAFN---- 116 (388)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHHHHHHSTTTSSTTTSHHHHHHHHHHTTTTHHHH-----------------GGGC----
T ss_pred cHHHHHhhHhHHHHHHHHHHHhhHHHhcchhhhhhhHHHHHHHHHHHHHHHHHHH-----------------HHHh----
Confidence 456788999999999999999998876 55555 36777777777776542 2333
Q ss_pred ccccCCHHHHHHHHHHhhhccHHHHHHHHHhcCC-CCChhHHHHHHHHHHhHHHHHHHHHHHHHHhhccCcchHHHHHHH
Q 003861 233 LVNIRSIDEAVVIGAALSLSSSAFVLQLLAEKGE-LPTRFGSATLGILLLQDIAVVPLLVILPVLESQVSESVWPMLVKE 311 (791)
Q Consensus 233 ~~~~~~~~~alllga~ls~TS~avv~~lL~e~~~-~~~~~g~l~l~~~~l~Di~~v~~l~i~~~l~~~~~~~~~~~l~~~ 311 (791)
.+..++..-+.+.+.||.++.+.++...+. .++..+..+++.+++||+.++++++++.. ++.+.. .+.
T Consensus 117 ----~~~~~~~~gw~ip~ATdIAfal~vL~~lg~~~p~~l~~flLalAvvDDl~aiivIAvfyt----~~~~~~-~l~-- 185 (388)
T 1zcd_A 117 ----YADPITREGWAIPAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAIIIIALFYT----NDLSMA-SLG-- 185 (388)
T ss_dssp ----CSSTTHHHHTSSSSCCCHHHHHHHHHSSCSSSCSSSHHHHHHHHHHHHHHHHHHHHHHSC----CCCCHH-HHH--
T ss_pred ----cCChhhhhhhHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHHHHc----CCccHH-HHH--
Confidence 233346677788888999999999998765 45556699999999999999999988632 122221 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHhHhcCCc-----cchh
Q 003861 312 SLKALAGLGLLSLGGKYLLRRVFEVVAEARSSEAFVALCLLTVAGTSLLTQKLGFSDTLGAFLAGAILAET-----NFRT 386 (791)
Q Consensus 312 ~~~~~~~~~~~~l~~~~~~~~l~~~i~~~~~~e~~~~~~l~~~~~~~~la~~lGls~~LgAflaGl~l~~~-----~~~~ 386 (791)
..+.. +...+.+ ++ .+.+.......+ .+...+.++..|+|+.+|+|++|++++.. +..+
T Consensus 186 --~~~~~-----~~~~~~l----~r---~~v~~~~~y~~l--gl~~w~~~~~sGvHatigg~l~Gl~ip~~~~~~~~~~~ 249 (388)
T 1zcd_A 186 --VAAVA-----IAVLAVL----NL---CGARRTGVYILV--GVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPAK 249 (388)
T ss_dssp --HHHHH-----HHHHHHH----HH---TTCCCTHHHHHH--HHHHHHHTTTSHHHHHHHHHHHHHHSCCCGGGSSCHHH
T ss_pred --HHHHH-----HHHHHHH----HH---hcchhHHHHHHH--HHHHHHHHHHhCccHHHHHHHHHHhccCCCccCCCHHH
Confidence 11111 1111111 21 122222222222 22345677999999999999999999985 3468
Q ss_pred HHHHhhhchH-hHHHHHH-HHHHcccCChH---HHHhhhHHHHHHHHHHHHHHHHHHHHhhhhc----------CCCHHH
Q 003861 387 QIEADIRPFR-GLLLGLF-FVTTGSSIDIE---LLFREWPNVLALLAGLIIIKTLIISAIGPRV----------GLTLQE 451 (791)
Q Consensus 387 ~i~~~l~~~~-~~f~~lF-Fv~vG~~l~l~---~l~~~~~~~l~l~l~~ll~K~l~~~~~~~~~----------~~~~r~ 451 (791)
++++.++++. .+++|+| |+..|.++|.. .+.+. ..+.+++..+++|+++++..++.. |.+|++
T Consensus 250 ~le~~l~p~v~~~ilPlFaFanaGv~l~~~~~~~l~~~--~~lgi~~glvvGK~~Gi~~~~~l~~rl~~~~lp~g~~~~~ 327 (388)
T 1zcd_A 250 RLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSI--LPLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQ 327 (388)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHCCCCCSSSCCCTHHHH--SSTTTTHHHHHTTGGGSTTHHHHTSSCTTTCCCCSCCGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCeeecccchhhccCh--HHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCCCCCCHHH
Confidence 8999999995 6899999 99999999974 33221 122445566899988855544443 899999
Q ss_pred HHHHHHHHhhhhhHHHHHHHHHHHcCC--cchhhhhHHHHHHHHHHHhHhHHHH
Q 003861 452 SVRIGLLLSQGGEFAFVVFSLANRLGV--LPLELNKLLIIVVVLSMALTPLLNE 503 (791)
Q Consensus 452 ~~~~g~~l~~rG~~~lvla~~a~~~g~--i~~~~~~~iv~~vvlt~iltpll~~ 503 (791)
...+|+.++.++++++++++.+.+.+. ..++.+..++.++++|.+++|++.+
T Consensus 328 ~~~vg~L~gigftmsL~Ia~laf~~~~~~~~~~ak~~il~~s~~s~i~g~~~L~ 381 (388)
T 1zcd_A 328 IMVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVGSISSAVIGYSWLR 381 (388)
T ss_dssp GTTHHHHTTCCHHHHHHHHHHHSTTSSCSSHHHHHHHHHHHHHTTTSTTTGGGT
T ss_pred HHHHHHHhccchHHHHHHHHHhccCCchhhHhhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998775 3455677888888889999988754
No 14
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens}
Probab=99.73 E-value=1.7e-17 Score=195.52 Aligned_cols=217 Identities=14% Similarity=0.093 Sum_probs=159.5
Q ss_pred cCCCCEEEeCCChhHHH--HHHHhhhhccCCCCCCCCCCcEEEEcCChh--hHHHHHh---cCCCEEEccCCCHHHHHhc
Q 003861 529 EGSEPVVIVGFGQMGQV--LANLLSAPLASGSDGNTVGWPFVAFDLNPS--VVKESRK---LGFPILYGDASRPAVLLSA 601 (791)
Q Consensus 529 ~~~~~viI~G~G~~G~~--la~~L~~~~~~~~~~~~~g~~vvvID~d~~--~v~~~~~---~~~~~v~GD~t~~~~L~~a 601 (791)
..++|+||||+++.++. +.++|.. -++...+.++|+++.++. .++...+ .++.+++||++++++|++|
T Consensus 51 ~~k~HIIIcG~~~~~~v~~fL~El~~-----~~~~~~~~~IVIL~~~~p~~eLe~lL~~~~~~V~fI~Gdat~~e~L~RA 125 (798)
T 3naf_A 51 SGRKHIVVCGHITLESVSNFLKDFLH-----KDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARV 125 (798)
T ss_dssp CSSEEEEEESCCCHHHHHHHHHHHTC-----TTSCCCCEEEEEEESSCCCHHHHHHHHHTTTTEEEEECCSSSHHHHHHT
T ss_pred cCCCeEEEEcCCCHHHHHHHHHHHHh-----hcccccCCcEEEEeCCCCcHHHHHHhhcccCceEEEEcCCCCHHHHHhc
Confidence 46899999999987664 5555541 011123568999987532 2333332 5788999999999999999
Q ss_pred CCCCCcEEEEEeC--------CHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHH------CCCCeEEcCcHHHHHHH
Q 003861 602 GITSPKAVMIMYT--------DKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKK------AGATDAILENAETSLQL 667 (791)
Q Consensus 602 gi~~a~~viv~~~--------~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~------~Gad~Vi~p~~~~~~~l 667 (791)
|+++|+++++..+ +|.+|+.+++++|+++|+++|+|++.++++.+.|++ +|||.||+|+...+..|
T Consensus 126 gI~~A~aVIIla~~~~~d~~~~Da~nIl~vLsar~lnP~i~IIa~~~~~en~~~L~~~~sw~~AGAd~VI~~~el~g~LL 205 (798)
T 3naf_A 126 KIESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFI 205 (798)
T ss_dssp TGGGCSEEEECCCTTCSCHHHHHHHHHHHHHHHHHHSTTCCEEEEESCTTGGGSGGGCTTCCTTTTCEEEEHHHHHHHHH
T ss_pred CHhhCCEEEEECCccccCCccchHHHHHHHHHHHHHCCCCCEEEEECCHhHHHHHHhcccchhcCCCEEEehHHHHHHHH
Confidence 9999999999874 588999999999999999999999999999999987 79999999999999999
Q ss_pred HHHHHhhcCCChHHHHHHHHHHhccc------ccc-----------eeeeecCCCchhhccc--------ccCCcchhhh
Q 003861 668 GSKLLKGFGVMSDDVTFLRQLVRNSM------EIQ-----------AQEVLSQKDDQEFDIM--------KPLQVRVADI 722 (791)
Q Consensus 668 a~~~l~~l~~~~~~~~~l~~~~~~~~------~~~-----------~~e~~~~~~~~~~~~~--------~~~~i~~~~l 722 (791)
|+.++. |+...++.+++.... +.| +..+..++. ..+++. +..++.+..+
T Consensus 206 Aqs~l~-----PGls~~i~~LLs~~~~~~~~~~~Wi~eY~~g~g~Eiy~v~l~s~-~~G~Tf~ea~~~lr~k~gaiLIGI 279 (798)
T 3naf_A 206 AQSCLA-----QGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNEMYTEYLSSA-FVGLSFPTVCELCFVKLKLLMIAI 279 (798)
T ss_dssp HHHHHS-----TTHHHHHHHHHSCCCCCCCCSCSHHHHHHHHHTBCCEEEECCGG-GTTCBHHHHHHHHHHHTCCCEEEE
T ss_pred HHHhcC-----CCHHHHHHHHhccccccccchhHHHHHHhcccCcEEEEEeCCcc-cCCCCHHHHHHHHHHhCCEEEEEE
Confidence 999998 999999999886521 112 222222211 112221 2334444444
Q ss_pred hhccCCCCCCCCccccccCCCCCCCCCCCCceeeeeccC
Q 003861 723 VEAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELNG 761 (791)
Q Consensus 723 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~gd~~l~~~~~~ 761 (791)
++...+ ++++...-|++++++++||.+.+.+.+.
T Consensus 280 ~r~~~~-----~~g~iilNP~~d~~L~~GD~LivIa~~~ 313 (798)
T 3naf_A 280 EYKSAN-----RESRILINPGNHLKIQEGTLGFFIASDA 313 (798)
T ss_dssp EEECSS-----SCEEEEESCCTTCBCCTTCEEEECCBTT
T ss_pred EeccCC-----CCCeEEECCCCCCEECCCCEEEEEeCCH
Confidence 443211 1345777799999999999998888653
No 15
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A
Probab=99.69 E-value=6.4e-17 Score=188.57 Aligned_cols=215 Identities=13% Similarity=0.088 Sum_probs=154.6
Q ss_pred CCCCEEEeCCChhHHH--HHHHhhhhccCCCCCCCCCCcEEEEcCCh--hhHHHH-H--hcCCCEEEccCCCHHHHHhcC
Q 003861 530 GSEPVVIVGFGQMGQV--LANLLSAPLASGSDGNTVGWPFVAFDLNP--SVVKES-R--KLGFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~--la~~L~~~~~~~~~~~~~g~~vvvID~d~--~~v~~~-~--~~~~~~v~GD~t~~~~L~~ag 602 (791)
.++|+||||+++.++. ..+++.. -++.....+||+++.++ +.++.+ + ..++.+++||++++++|++||
T Consensus 2 gk~HIIVcG~~~~~sV~~FL~Ef~h-----~d~~~~~~~VVIL~~~~P~~ELe~lL~~~~~~V~fI~Gdat~~edL~RA~ 76 (726)
T 3mt5_A 2 GRKHIVVCGHITLESVSNFLKDFLH-----KDRDDVNVEIVFLHNISPNLELEALFKRHFTQVEFYQGSVLNPHDLARVK 76 (726)
T ss_dssp --CEEEEEESCCHHHHHHHHHHHHH-----HCTTTTTCEEEEECSSCCCHHHHTTHHHHCSSEEEECCCTTSHHHHHHTT
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHh-----ccccccCCcEEEEeCCCCCHHHHHHHHhhcCceEEEEeCCCCHHHHHhcC
Confidence 4789999999998886 3455431 01123455899998754 233333 2 267889999999999999999
Q ss_pred CCCCcEEEEEeC--------CHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHH------CCCCeEEcCcHHHHHHHH
Q 003861 603 ITSPKAVMIMYT--------DKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKK------AGATDAILENAETSLQLG 668 (791)
Q Consensus 603 i~~a~~viv~~~--------~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~------~Gad~Vi~p~~~~~~~la 668 (791)
+++|+++++..+ +|.+|+.+++++|+++|+++|+|++.++++.+.|++ +|||.||.|++..+..||
T Consensus 77 I~~A~aVIIlad~~~~d~~~sDa~nIl~vLsar~lnP~i~IVA~~~~~en~~~L~ri~sw~~AGAd~VI~~~el~g~LLA 156 (726)
T 3mt5_A 77 IESADACLILANKYCADPDAEDASNIMRVISIKNYHPKIRIITQMLQYHNKAHLLNIPSWNWKEGDDAICLAELKLGFIA 156 (726)
T ss_dssp GGGCSEEEEECCTTCSCHHHHHHHHHHHHHHHHHHCTTSCEEEEESCHHHHGGGGGSTTCCTTTTCEEEEHHHHHHHHHH
T ss_pred hhhcCEEEEEcCccccCCcccHHHHHHHHHHHHHhCCCCCEEEEECCHHHHHHHhhccchhhcCCCEEEehHHHHHHHHH
Confidence 999999999764 589999999999999999999999999999999984 899999999999999999
Q ss_pred HHHHhhcCCChHHHHHHHHHHhccc------ccce-----------eeeecCCCchhhcc--------cccCCcchhhhh
Q 003861 669 SKLLKGFGVMSDDVTFLRQLVRNSM------EIQA-----------QEVLSQKDDQEFDI--------MKPLQVRVADIV 723 (791)
Q Consensus 669 ~~~l~~l~~~~~~~~~l~~~~~~~~------~~~~-----------~e~~~~~~~~~~~~--------~~~~~i~~~~l~ 723 (791)
+.++. |+...++.+++.... +.|+ .++..++. ..+++ .+..++.+..++
T Consensus 157 qs~l~-----PGlst~i~~LLs~~s~~~~~~~~wi~EY~~g~g~EiY~v~l~s~-~~G~Tf~ea~~~lr~k~gaiLIGI~ 230 (726)
T 3mt5_A 157 QSCLA-----QGLSTMLANLFSMRSFIKIEEDTWQKYYLEGVSNEMYTEYLSSA-FVGLSFPTVCELCFVKLKLLMIAIE 230 (726)
T ss_dssp HHHHS-----TTHHHHHHTTTSCCCCCCCCSSSHHHHHHHHHTCEEEEEECCGG-GTTSBHHHHHHHHHHTTCCEEEEEE
T ss_pred HHhcC-----CCHHHHHHHHHhcccccccchhHHHHHHhccCCceEEEEeCCcc-cCCCCHHHHHHHHHhhCCEEEEEEE
Confidence 99998 999999988876421 1222 22222211 11221 123344444444
Q ss_pred hccCCCCCCCCccccccCCCCCCCCCCCCceeeeecc
Q 003861 724 EAEKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELN 760 (791)
Q Consensus 724 ~~~~~~~~~~~~~~~~~~p~~~~~~~~gd~~l~~~~~ 760 (791)
+...+ .+++...-|++++++++||.+.+.+.+
T Consensus 231 r~~~~-----~~g~iilNP~~d~~I~~GD~LiVIa~s 262 (726)
T 3mt5_A 231 YKSAN-----RESRILINPGNHLKIQEGTLGFFIASD 262 (726)
T ss_dssp C-----------CCCEESCCTTCBCCTTCEEEEEESC
T ss_pred ecccC-----CCCeEEECCCCCcEECCCCEEEEEECC
Confidence 42111 134566679999999999999887754
No 16
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=99.67 E-value=1.8e-16 Score=150.05 Aligned_cols=132 Identities=20% Similarity=0.303 Sum_probs=123.6
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.++++|+|+|.+|+.+++.|. +.|++|+++|.|+++.+.+++.+..++.||.++++.+++++++++|.++
T Consensus 6 ~~~v~I~G~G~iG~~~a~~l~----------~~g~~v~~~d~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 75 (144)
T 2hmt_A 6 NKQFAVIGLGRFGGSIVKELH----------RMGHEVLAVDINEEKVNAYASYATHAVIANATEENELLSLGIRNFEYVI 75 (144)
T ss_dssp CCSEEEECCSHHHHHHHHHHH----------HTTCCCEEEESCHHHHHTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEE
T ss_pred CCcEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEE
Confidence 358999999999999999998 7899999999999999888877888899999999999999999999999
Q ss_pred EEeCCH-HHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHh
Q 003861 611 IMYTDK-KRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 673 (791)
Q Consensus 611 v~~~~d-~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~ 673 (791)
.+++++ +.|..++..+|+.+|+ +++++++++.+.+.++++|+|.|+.|+..++..+++.+++
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~-~ii~~~~~~~~~~~l~~~g~~~vi~p~~~~~~~l~~~~~~ 138 (144)
T 2hmt_A 76 VAIGANIQASTLTTLLLKELDIP-NIWVKAQNYYHHKVLEKIGADRIIHPEKDMGVKIAQSLSD 138 (144)
T ss_dssp ECCCSCHHHHHHHHHHHHHTTCS-EEEEECCSHHHHHHHHHHTCSEEECHHHHHHHHHHHHHHH
T ss_pred ECCCCchHHHHHHHHHHHHcCCC-eEEEEeCCHHHHHHHHHcCCCEEECccHHHHHHHHHHHhh
Confidence 999986 8899999999999986 9999999999999999999999999999999999999987
No 17
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=99.66 E-value=7.6e-16 Score=145.08 Aligned_cols=131 Identities=16% Similarity=0.216 Sum_probs=121.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++|+|+|++|+.+++.|. +.|++|+++|.|+++.+.+++ .+..++.||.++++.+++++++++|.++
T Consensus 5 m~i~IiG~G~iG~~~a~~L~----------~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi 74 (140)
T 1lss_A 5 MYIIIAGIGRVGYTLAKSLS----------EKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYI 74 (140)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEE
Confidence 47999999999999999998 789999999999999988875 4788899999999999999999999999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHh
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 673 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~ 673 (791)
+++++++.|..++..+++.+++ +++++++++++.+.++++|+|.|++|+...+.++++.+.+
T Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~-~ii~~~~~~~~~~~l~~~g~~~v~~p~~~~~~~~~~~~~~ 136 (140)
T 1lss_A 75 AVTGKEEVNLMSSLLAKSYGIN-KTIARISEIEYKDVFERLGVDVVVSPELIAANYIEKLIER 136 (140)
T ss_dssp ECCSCHHHHHHHHHHHHHTTCC-CEEEECSSTTHHHHHHHTTCSEEECHHHHHHHHHHHHHTC
T ss_pred EeeCCchHHHHHHHHHHHcCCC-EEEEEecCHhHHHHHHHcCCCEEECHHHHHHHHHHHHhcc
Confidence 9999999999999999998875 8999999999999999999999999999999999987765
No 18
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=99.66 E-value=3.3e-16 Score=151.56 Aligned_cols=134 Identities=21% Similarity=0.266 Sum_probs=124.2
Q ss_pred cCCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH-hcCCCEEEccCCCHHHHHhcCCCCCc
Q 003861 529 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR-KLGFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 529 ~~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~-~~~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
...++++|+|+|++|+.+++.|. +.|++|+++|.|+++.+.++ +.|..++.||.++++.|++++++++|
T Consensus 17 ~~~~~v~IiG~G~iG~~la~~L~----------~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad 86 (155)
T 2g1u_A 17 QKSKYIVIFGCGRLGSLIANLAS----------SSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKAD 86 (155)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCS
T ss_pred cCCCcEEEECCCHHHHHHHHHHH----------hCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCC
Confidence 35678999999999999999998 78999999999999998887 67888899999999999999999999
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHh
Q 003861 608 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETSLQLGSKLLK 673 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~ 673 (791)
.+++++++++.|..++..+|+++|..+++++++++.+.+.++++|+| +++|+..++..+++.+..
T Consensus 87 ~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~~~~~~~~~~~l~~~G~~-vi~p~~~~a~~l~~~l~~ 151 (155)
T 2g1u_A 87 MVFAFTNDDSTNFFISMNARYMFNVENVIARVYDPEKIKIFEENGIK-TICPAVLMIEKVKEFIIG 151 (155)
T ss_dssp EEEECSSCHHHHHHHHHHHHHTSCCSEEEEECSSGGGHHHHHTTTCE-EECHHHHHHHHHHHHHHC
T ss_pred EEEEEeCCcHHHHHHHHHHHHHCCCCeEEEEECCHHHHHHHHHCCCc-EEcHHHHHHHHHHHHHhc
Confidence 99999999999999999999988888999999999999999999999 999999999988877654
No 19
>4hpf_A Potassium channel subfamily U member 1; PH-gated, membrane protein, transport Pro; 3.40A {Homo sapiens}
Probab=99.35 E-value=1.8e-12 Score=155.38 Aligned_cols=219 Identities=13% Similarity=0.038 Sum_probs=145.8
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHH--H-HH--hcCCCEEEccCCCHHHHHhcCCC
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVK--E-SR--KLGFPILYGDASRPAVLLSAGIT 604 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~--~-~~--~~~~~~v~GD~t~~~~L~~agi~ 604 (791)
.++||||||+++.++ +...|++.+.. +..+.+.+||++..++...+ . +. ...+.+++||+++++.|++|+++
T Consensus 2 gk~HivvcG~~~~~~-l~~fL~ef~~~--~~~~~~~~vVil~~~~p~~el~~~l~~~~~~v~~i~Gs~~~~~dL~ra~i~ 78 (722)
T 4hpf_A 2 GKKFIVVCGNITVDS-VTAFLRNFLRD--KSGEINTEIVFLGETPPSLELETIFKCYLAYTTFISGSAMKWEDLRRVAVE 78 (722)
T ss_dssp -CCEEEEESCCCHHH-HHHHHTTC----------CCEEECCBSCC------CCCCTTTTSEECCBCCSSCHHHHHHHTGG
T ss_pred CCCEEEEECCCCHHH-HHHHHHHHhhh--hhhcCCCeEEEEeCCCCCHHHHHHHhhhCceEEEEEcCCCCHHHHHhcCcc
Confidence 378999999998876 44444421111 11234667888865443221 1 11 12355678999999999999999
Q ss_pred CCcEEEEEeC--------CHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHH------CCCCeEEcCcHHHHHHHHHH
Q 003861 605 SPKAVMIMYT--------DKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKK------AGATDAILENAETSLQLGSK 670 (791)
Q Consensus 605 ~a~~viv~~~--------~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~------~Gad~Vi~p~~~~~~~la~~ 670 (791)
+|+++++..+ +|..|+..++.+|+.+|+++|+|+..++++...+++ +|||.||++++..+..||+.
T Consensus 79 ~A~av~Il~~~~~~d~~~~D~~~il~~laik~~~p~~~iivq~~~~~n~~~~~~~~~~~~~gad~VI~~~el~~~lla~s 158 (722)
T 4hpf_A 79 SAEACLIIANPLCSDSHAEDISNIMRVLSIKNYDSTTRIIIQILQSHNKVYLPKIPSWNWDTGDNIICFAELKLGFIAQG 158 (722)
T ss_dssp GSSEEEECCCSSCSCHHHHHHHHHHHHHHHHHHCTTCCEEEECSSGGGGGHHHHSTTCCTTTTCEEECHHHHHHHHHHHH
T ss_pred cCCEEEEeCCCccCCchhhHHHHHHHHHHHHHhCCCCCEEEEECChhhHHHHHhhhhhhhcCCCeEEeHHHHHHHHHHHH
Confidence 9999999875 488999999999999999999999999999888776 69999999999999999999
Q ss_pred HHhhcCCChHHHHHHHHHHhccccc------cee-----------eeecCCCchhhcc--------cccCCcchhhhhhc
Q 003861 671 LLKGFGVMSDDVTFLRQLVRNSMEI------QAQ-----------EVLSQKDDQEFDI--------MKPLQVRVADIVEA 725 (791)
Q Consensus 671 ~l~~l~~~~~~~~~l~~~~~~~~~~------~~~-----------e~~~~~~~~~~~~--------~~~~~i~~~~l~~~ 725 (791)
++. |+....+..+++..... |.. .+..++ ...+++ .++.++-...+.+.
T Consensus 159 ~~~-----PG~stli~~Ll~~~~~~~~~~~~w~~~Y~~g~~~eiy~~~~~~-~~~G~tf~e~~~~~~~~~~~iligi~~~ 232 (722)
T 4hpf_A 159 CLV-----PGLCTFLTSLFVEQNKKVMPKQTWKKHFLNSMKNKILTQRLSD-DFAGMSFPEVARLCFLKMHLLLIAIEYK 232 (722)
T ss_dssp HHS-----TTHHHHHHHTTCCCCSCCCCSSHHHHHHHHHHTCBCCEEECCG-GGTTCBHHHHHHHHHHHSCCEEEEEEC-
T ss_pred hcC-----CCHHHHHHHHHhcccccccchhhHHHHHhcccCceEEEeeCCc-ccCCCCHHHHHHHHHhhcCeEEEEeecc
Confidence 998 99988888887653211 111 111111 111121 12223333333321
Q ss_pred cCCCCCCCCccccccCCCCCCCCCCCCceeeeecc
Q 003861 726 EKTIPSTSNDDKLSREDNTDTAGEDAKGVLYCELN 760 (791)
Q Consensus 726 ~~~~~~~~~~~~~~~~p~~~~~~~~gd~~l~~~~~ 760 (791)
... .-.+++..+=|++++++++||.+.+.+..
T Consensus 233 ~~~---~~~~~~i~lNP~~~~~i~~~D~~~~Ia~~ 264 (722)
T 4hpf_A 233 SLF---TDGFCGLILNPPPQVRIRKNTLGFFIAET 264 (722)
T ss_dssp ---------CCCCEESCCTTCBCCTTCEEEEEBSC
T ss_pred ccc---ccCCCeEEECCCCCeEECCCCEEEEEECC
Confidence 110 11134566679999999999999988653
No 20
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=98.13 E-value=1.1e-05 Score=72.51 Aligned_cols=101 Identities=21% Similarity=0.183 Sum_probs=78.2
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCC-CcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g-~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++|+|.|.+|+.+++.|. +.| ++|+++|.++++.+.+.+.+...+.+|.++++.++++ ++++|.++
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~----------~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~d~~~~~~~~~~-~~~~d~vi 74 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLK----------TSSNYSVTVADHDLAALAVLNRMGVATKQVDAKDEAGLAKA-LGGFDAVI 74 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHH----------HCSSEEEEEEESCHHHHHHHHTTTCEEEECCTTCHHHHHHH-TTTCSEEE
T ss_pred CeEEEECCCHHHHHHHHHHH----------hCCCceEEEEeCCHHHHHHHHhCCCcEEEecCCCHHHHHHH-HcCCCEEE
Confidence 47999999999999999998 778 8999999999999988888899999999999998876 67899998
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHH
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLL 646 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~ 646 (791)
.+++.. .+..++..+++.+ ++.+--..+.+..+
T Consensus 75 ~~~~~~-~~~~~~~~~~~~g--~~~~~~~~~~~~~~ 107 (118)
T 3ic5_A 75 SAAPFF-LTPIIAKAAKAAG--AHYFDLTEDVAATN 107 (118)
T ss_dssp ECSCGG-GHHHHHHHHHHTT--CEEECCCSCHHHHH
T ss_pred ECCCch-hhHHHHHHHHHhC--CCEEEecCcHHHHH
Confidence 888643 3444555555543 34443334433333
No 21
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=97.46 E-value=0.00019 Score=75.22 Aligned_cols=103 Identities=11% Similarity=0.032 Sum_probs=75.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh-----hHHHHH----------------------h-
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-----VVKESR----------------------K- 582 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~-----~v~~~~----------------------~- 582 (791)
.++++|+|.|+.|...++.|. +.|.+|+|||.+.. ..+.+. +
T Consensus 13 ~k~VLVVGgG~va~rka~~Ll----------~~Ga~VtViap~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (274)
T 1kyq_A 13 DKRILLIGGGEVGLTRLYKLM----------PTGCKLTLVSPDLHKSIIPKFGKFIQNKDQPDYREDAKRFINPNWDPTK 82 (274)
T ss_dssp TCEEEEEEESHHHHHHHHHHG----------GGTCEEEEEEEEECTTHHHHHCGGGC-----------CEEECTTCCTTS
T ss_pred CCEEEEECCcHHHHHHHHHHH----------hCCCEEEEEcCCCCcchhHHHHHHHhccccccccchhhccccccccccc
Confidence 357999999999999999998 89999999998753 222221 1
Q ss_pred cCC-CEEEccCCCHHHHH---hcCCCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHH
Q 003861 583 LGF-PILYGDASRPAVLL---SAGITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLL 646 (791)
Q Consensus 583 ~~~-~~v~GD~t~~~~L~---~agi~~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~ 646 (791)
.+. .++.++.. ++-|+ + ++.++.|++++++++.|..++..+|+.+..-..+.++++++...
T Consensus 83 g~i~~~i~~~~~-~~dL~~l~~--~~~adlViaat~d~~~n~~I~~~Ar~~f~~~i~VNvvd~pel~~ 147 (274)
T 1kyq_A 83 NEIYEYIRSDFK-DEYLDLENE--NDAWYIIMTCIPDHPESARIYHLCKERFGKQQLVNVADKPDLCD 147 (274)
T ss_dssp CCCSEEECSSCC-GGGGCCSST--TCCEEEEEECCSCHHHHHHHHHHHHHHHCTTSEEEETTCGGGBS
T ss_pred CCeeEEEcCCCC-HHHHhhccc--CCCeEEEEEcCCChHHHHHHHHHHHHhcCCCcEEEECCCcccCe
Confidence 223 55666543 33332 3 56899999999999999999999999843224677788888765
No 22
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.31 E-value=0.00055 Score=69.58 Aligned_cols=94 Identities=11% Similarity=0.043 Sum_probs=68.2
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh-hHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVKESRK-LGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~-~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
.++++|+|.|++|...++.|. +.|.+|++|+.+.. .++.+.+ .+..++.++..+ ..++++|.
T Consensus 31 gk~VLVVGgG~va~~ka~~Ll----------~~GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~------~dL~~adL 94 (223)
T 3dfz_A 31 GRSVLVVGGGTIATRRIKGFL----------QEGAAITVVAPTVSAEINEWEAKGQLRVKRKKVGE------EDLLNVFF 94 (223)
T ss_dssp TCCEEEECCSHHHHHHHHHHG----------GGCCCEEEECSSCCHHHHHHHHTTSCEEECSCCCG------GGSSSCSE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEECCCCCHHHHHHHHcCCcEEEECCCCH------hHhCCCCE
Confidence 457999999999999999998 88999999987654 3444444 346666665542 35678999
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhh
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMH 644 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~ 644 (791)
||++|++++.|..++..+| .+ ++ +.++++++.
T Consensus 95 VIaAT~d~~~N~~I~~~ak-~g--i~-VNvvD~p~~ 126 (223)
T 3dfz_A 95 IVVATNDQAVNKFVKQHIK-ND--QL-VNMASSFSD 126 (223)
T ss_dssp EEECCCCTHHHHHHHHHSC-TT--CE-EEC-----C
T ss_pred EEECCCCHHHHHHHHHHHh-CC--CE-EEEeCCccc
Confidence 9999999999999998886 43 33 556666665
No 23
>3naf_A Calcium-activated potassium channel subunit alpha; ION channel, gating ring, rossman fold, transport, ION trans; 3.10A {Homo sapiens}
Probab=97.28 E-value=0.00057 Score=81.04 Aligned_cols=161 Identities=17% Similarity=0.088 Sum_probs=101.4
Q ss_pred ccCCCCEEEeCCChhH------HHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----cCCCEEEccCCCHHH
Q 003861 528 YEGSEPVVIVGFGQMG------QVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----LGFPILYGDASRPAV 597 (791)
Q Consensus 528 ~~~~~~viI~G~G~~G------~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~~~~~v~GD~t~~~~ 597 (791)
...++|+|||++|.-. +.+..-|+ ...-+.++-.++|++...+-..++++. ..+.++.|++...+.
T Consensus 398 ~~~~nHivvC~~~~~~~~~~gl~~fv~PLR----a~~~~~~~l~~IVil~~~~~~~~~w~~i~~Fp~Vy~v~Gspl~~~d 473 (798)
T 3naf_A 398 TVLSGHVVVCIFGDVSSALIGLRNLVMPLR----ASNFHYHELKHIVFVGSIEYLKREWETLHNFPKVSILPGTPLSRAD 473 (798)
T ss_dssp SCCCSCEEEEEECCSSSCCCCTHHHHHHHH----CSSSCSTTCCCEEEEBCHHHHHHHHTTTTTSSSEEBCBSCTTCHHH
T ss_pred hccCCCEEEEEecCCCcchhhhHHhhhhhh----cccCCccccCCEEEECCCCcCHHHHHHhhCCCceEEecCCCCCHHH
Confidence 4688999999998543 34455554 222222334578888764433344543 346778899999999
Q ss_pred HHhcCCCCCcEEEEEeCC----------HHHHHHHHHHHHHh--------------------------------------
Q 003861 598 LLSAGITSPKAVMIMYTD----------KKRTIEAVQRLRLA-------------------------------------- 629 (791)
Q Consensus 598 L~~agi~~a~~viv~~~~----------d~~n~~~~~~ar~l-------------------------------------- 629 (791)
|++|||+.|+.+|+..+. |..++++++++|.+
T Consensus 474 L~~anI~~a~~~VIls~~~~~~~~~~l~D~~~il~~lni~~m~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 553 (798)
T 3naf_A 474 LRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQP 553 (798)
T ss_dssp HHHTTSTTCSEEEEEESSCTTCCCSSSTTHHHHHHHHHHHHCCCC-----------------------------------
T ss_pred HHHhCHHhCCEEEEEcCCCCCCCChhhhhHHHHHhhhhhhhhccccccccccccccccccccccccccccccccchhhcc
Confidence 999999999998888542 45677666666552
Q ss_pred ----CCCCcEEEEecChhhHHHHHHCC-----CCeEEcCcHHHHHH----HHHHHHhhcCCChHHHHHHHHHHhcc
Q 003861 630 ----FPAIPIYARAQDMMHLLDLKKAG-----ATDAILENAETSLQ----LGSKLLKGFGVMSDDVTFLRQLVRNS 692 (791)
Q Consensus 630 ----~p~~~iiara~~~~~~~~L~~~G-----ad~Vi~p~~~~~~~----la~~~l~~l~~~~~~~~~l~~~~~~~ 692 (791)
+++++++....++.|.+.+.... .+....|....|.. +-..++...-..+..++.+..++...
T Consensus 554 ~~~~~~~ipiitEL~~~~ni~fl~~~~~~~~~~~~~~~~~fa~G~~fs~s~ldsl~~~~y~n~~~~~il~~lvtGg 629 (798)
T 3naf_A 554 SITTGVNIPIITELVNDTNVQFLDQDDDDDPDTELYLTQPFACGTAFAVSVLDSLMSATYFNDNILTLIRTLVTGG 629 (798)
T ss_dssp ---CTTCCCEEEEESSTTGGGGGSCCTTCCTTCCGGGSHHHHHTSEEETTHHHHHHHHHHHCTHHHHHHHHHHSCS
T ss_pred ccccCCCCceEEEecCCCccccccccCCCccCcceeecccccccceeHHHHHHHHHHHHHhCHHHHHHHHHHHhCC
Confidence 56788999999999988886632 22222222222222 12222222233467777777777654
No 24
>1vct_A Hypothetical protein PH0236; helix rich, structural genomics, riken structural genomics/P initiative, RSGI, NPPSFA; 1.85A {Pyrococcus horikoshii} SCOP: a.7.12.1 d.286.1.1 PDB: 2bkn_A 2bko_A 2bkp_A
Probab=97.27 E-value=2.6e-06 Score=85.91 Aligned_cols=132 Identities=8% Similarity=-0.028 Sum_probs=83.0
Q ss_pred cCCCHHHHHhcCCCCCc------EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCCCeEEcCcHHHH
Q 003861 591 DASRPAVLLSAGITSPK------AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGATDAILENAETS 664 (791)
Q Consensus 591 D~t~~~~L~~agi~~a~------~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Gad~Vi~p~~~~~ 664 (791)
|.+|++.+.+.+++++| .++.++++|+.|...++. |+.+-+ +||++++++.+...+++.|++.++ .+
T Consensus 42 ~~a~~~ll~ee~i~~~d~~l~~~i~v~~t~~de~n~L~~ll-k~aGa~-~VIa~~~~~~~~~vl~~~gi~~vi----~~- 114 (205)
T 1vct_A 42 EIAEEVLELEERIDLLNYQLMMHSVLAARNVKEAEQVITIL-QIANAI-EDISNAAGDLAKMVLEGVELHPVI----KE- 114 (205)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHH-HHHHHH-HHHHHHHHHHHHHHHTTCCCCHHH----HH-
T ss_pred HHHHHHHHHHHHHHHhhhhhceeeeeecCChhhHHHHHHHH-HHcCCC-EEEcccchHHHHHHHHhcCCCHHH----HH-
Confidence 44567777777888877 777777777777766664 666532 577777777777777777777443 11
Q ss_pred HHHHHHHHhhcCCChHHHHHHHHHHhcccccceeeeecCCC-chhhcccccCCc------chhhhhhccCCCCCCCCccc
Q 003861 665 LQLGSKLLKGFGVMSDDVTFLRQLVRNSMEIQAQEVLSQKD-DQEFDIMKPLQV------RVADIVEAEKTIPSTSNDDK 737 (791)
Q Consensus 665 ~~la~~~l~~l~~~~~~~~~l~~~~~~~~~~~~~e~~~~~~-~~~~~~~~~~~i------~~~~l~~~~~~~~~~~~~~~ 737 (791)
.++ . .+..+.++.++.. .+.+++++++++ ++..++| +++
T Consensus 115 ------~~r-----------------~-~~~~~~e~~v~~~s~~~GktL~el~l~~~~gv~IvaI~R----------~g~ 160 (205)
T 1vct_A 115 ------TIL-----------------E-GEEIIGKIQVYPESVIVGKTLGELDLATNTGVWIIAVRR----------GKR 160 (205)
T ss_dssp ------HHH-----------------H-SSSEEEEEECCTTCTTTTCBHHHHCHHHHHSCEEEEEEE----------TTE
T ss_pred ------HHH-----------------h-ccCeEEEEEECCCCccCCCCHHHcCCCccCCEEEEEEEE----------CCE
Confidence 111 1 1234444444332 245666665543 4445554 234
Q ss_pred cccCCCCCCCCCCCCceeeeeccCCC
Q 003861 738 LSREDNTDTAGEDAKGVLYCELNGTN 763 (791)
Q Consensus 738 ~~~~p~~~~~~~~gd~~l~~~~~~~~ 763 (791)
....|++++.|++||.|..+|....-
T Consensus 161 ~i~~P~~dt~L~~GD~Liv~g~~~~i 186 (205)
T 1vct_A 161 WIFGPNENFKIRAGDVLIGRGTRTSI 186 (205)
T ss_dssp EEESCCTTCBCCTTCEEEEEECHHHH
T ss_pred EEeCCCCCCEECCCCEEEEEECHHHH
Confidence 45579999999999999999986653
No 25
>4hpf_A Potassium channel subfamily U member 1; PH-gated, membrane protein, transport Pro; 3.40A {Homo sapiens}
Probab=97.17 E-value=0.00064 Score=81.25 Aligned_cols=123 Identities=18% Similarity=0.132 Sum_probs=84.2
Q ss_pred cCCCCEEEeCCChh---HHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----cCCCEEEccCCCHHHHHhc
Q 003861 529 EGSEPVVIVGFGQM---GQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----LGFPILYGDASRPAVLLSA 601 (791)
Q Consensus 529 ~~~~~viI~G~G~~---G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~~~~~v~GD~t~~~~L~~a 601 (791)
..++|+||||+|.- +..+.... .|++....+..+=.++|++..++-..+.+.. ..+.++.|++.+.+.|++|
T Consensus 383 ~~~nhivvc~~~~~~~~~~gL~~fi-~PLRa~~~~~~el~pIViL~~~~~~~~~w~~i~~Fp~Vy~~~GSpl~~~DL~ra 461 (722)
T 4hpf_A 383 KFRNHIVACVFGDAHSAPMGLRNFV-MPLRASNYTRKELKDIVFIGSLDYLQREWRFLWNFPQIYILPGCALYSGDLHAA 461 (722)
T ss_dssp CCCSCEEEEECCCTTSCCCCSHHHH-GGGGBTTSCGGGCCCEEEEECHHHHHHHGGGGTTCSSEEEEESCTTCHHHHHHT
T ss_pred cccCCEEEEeccCcccccccchhhe-eeccccccccccCCCEEEEeCCCCCHHHHHHHhcCCCEEEEECCcCCHHHHHhc
Confidence 57899999997642 22232222 2333222222233467777654433344443 2467889999999999999
Q ss_pred CCCCCcEEEEEeCC----------HHHHHHHHHHHHHh-------CCCCcEEEEecChhhHHHHHHCC
Q 003861 602 GITSPKAVMIMYTD----------KKRTIEAVQRLRLA-------FPAIPIYARAQDMMHLLDLKKAG 652 (791)
Q Consensus 602 gi~~a~~viv~~~~----------d~~n~~~~~~ar~l-------~p~~~iiara~~~~~~~~L~~~G 652 (791)
|+..|+.+|+...+ |.+++.++++++++ +|.++++....++.+.+.+....
T Consensus 462 gi~~a~~vVIl~~~~~~~~~~~~~D~~tI~~~~~I~~l~~~~~~~~~~i~iitEL~~~sN~~fl~~~~ 529 (722)
T 4hpf_A 462 NIEQCSMCAVLSPPPQPSSNQTLVDTEAIMATLTIGSLQIDEKSNCRKVPILTELKNPSNIHFIEQLG 529 (722)
T ss_dssp TGGGCSEEEEECCCCCC-----CCSHHHHHHHHHHHSCCC-------CCCEEEECSSGGGHHHHHHHH
T ss_pred CcccccEEEEEcCCCCCcccchhhhHHHHHHHHHHHHHHhhhhccCCCCcEEEEecCcccchhhcccc
Confidence 99999999887621 56788889999888 47788999999999999987543
No 26
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=97.13 E-value=0.0023 Score=69.90 Aligned_cols=111 Identities=16% Similarity=0.084 Sum_probs=84.0
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
.+.+|+|+|.|.+|+.+++.|. ...+|.+.|.++++.+.+++. ...+..|.+|++.|+++ ++++|.|
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~-----------~~~~v~~~~~~~~~~~~~~~~-~~~~~~d~~d~~~l~~~-~~~~DvV 81 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLK-----------DEFDVYIGDVNNENLEKVKEF-ATPLKVDASNFDKLVEV-MKEFELV 81 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHT-----------TTSEEEEEESCHHHHHHHTTT-SEEEECCTTCHHHHHHH-HTTCSEE
T ss_pred CccEEEEECCCHHHHHHHHHHh-----------cCCCeEEEEcCHHHHHHHhcc-CCcEEEecCCHHHHHHH-HhCCCEE
Confidence 3446999999999999999995 467999999999999887654 66788999999999887 7889999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEEecC----hhhHHHHHHCCCCeE
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYARAQD----MMHLLDLKKAGATDA 656 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiara~~----~~~~~~L~~~Gad~V 656 (791)
|.+++.. .+..++..+-+.+. +.+-...+ .+..+..+++|+.-+
T Consensus 82 i~~~p~~-~~~~v~~~~~~~g~--~yvD~s~~~~~~~~l~~~a~~~g~~~i 129 (365)
T 3abi_A 82 IGALPGF-LGFKSIKAAIKSKV--DMVDVSFMPENPLELRDEAEKAQVTIV 129 (365)
T ss_dssp EECCCGG-GHHHHHHHHHHHTC--EEEECCCCSSCGGGGHHHHHHTTCEEE
T ss_pred EEecCCc-ccchHHHHHHhcCc--ceEeeeccchhhhhhhhhhccCCceee
Confidence 8888764 56677788888763 44433322 234456677776543
No 27
>3zux_A Transporter, ASBTNM; transport protein, membrane protein; HET: TCH LDA PTY; 2.20A {Neisseria meningitidis} PDB: 3zuy_A*
Probab=97.07 E-value=0.46 Score=50.98 Aligned_cols=42 Identities=14% Similarity=0.063 Sum_probs=28.6
Q ss_pred HHHHHHHHhhhhcCCCHHHHHHHHHHH-hhhhhHHHHHHHHHH
Q 003861 433 IKTLIISAIGPRVGLTLQESVRIGLLL-SQGGEFAFVVFSLAN 474 (791)
Q Consensus 433 ~K~l~~~~~~~~~~~~~r~~~~~g~~l-~~rG~~~lvla~~a~ 474 (791)
.-+...+..++.+|.+.+++..+++.. .+....++.++....
T Consensus 240 ~~~~lg~~~~r~~~~~~~~~~ti~~e~G~qNs~lai~lA~~~F 282 (332)
T 3zux_A 240 IGYLLGFFAAKWTGLPYDAQKALTIEVGMQNSGLAAALAAAHF 282 (332)
T ss_dssp HHHHHHHHHHHHTTCCHHHHHHHHHHHHCCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHhCCCHhHhhhhhhhhhhccHHHHHHHHHHHc
Confidence 334455667778899999999888854 444666766665543
No 28
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=96.96 E-value=0.001 Score=70.50 Aligned_cols=105 Identities=15% Similarity=0.156 Sum_probs=68.8
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEcc--------CCCHHHHHhcCCC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGD--------ASRPAVLLSAGIT 604 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD--------~t~~~~L~~agi~ 604 (791)
++.|+|.|.+|..++..|. +.|++|+++|.++++.+.+++.|......+ .++++-+.+ .++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 73 (316)
T 2ew2_A 5 KIAIAGAGAMGSRLGIMLH----------QGGNDVTLIDQWPAHIEAIRKNGLIADFNGEEVVANLPIFSPEEIDH-QNE 73 (316)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHCEEEEETTEEEEECCCEECGGGCCT-TSC
T ss_pred eEEEECcCHHHHHHHHHHH----------hCCCcEEEEECCHHHHHHHHhCCEEEEeCCCeeEecceeecchhhcc-cCC
Confidence 6899999999999999998 789999999999999999887775544311 112211111 245
Q ss_pred CCcEEEEEeCCHHHHHHHHHHHHHh-CCCCcEEEEecChhhHHHHH
Q 003861 605 SPKAVMIMYTDKKRTIEAVQRLRLA-FPAIPIYARAQDMMHLLDLK 649 (791)
Q Consensus 605 ~a~~viv~~~~d~~n~~~~~~ar~l-~p~~~iiara~~~~~~~~L~ 649 (791)
++|.+++++..+. ...+...++.. .|+..++.-.+.....+.+.
T Consensus 74 ~~d~vi~~v~~~~-~~~v~~~l~~~l~~~~~iv~~~~g~~~~~~l~ 118 (316)
T 2ew2_A 74 QVDLIIALTKAQQ-LDAMFKAIQPMITEKTYVLCLLNGLGHEDVLE 118 (316)
T ss_dssp CCSEEEECSCHHH-HHHHHHHHGGGCCTTCEEEECCSSSCTHHHHT
T ss_pred CCCEEEEEecccc-HHHHHHHHHHhcCCCCEEEEecCCCCcHHHHH
Confidence 8999999998653 23333344443 44433444444444444443
No 29
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=96.96 E-value=0.0027 Score=66.09 Aligned_cols=87 Identities=20% Similarity=0.230 Sum_probs=68.4
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCC--CCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~--g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
+++|.|. |.+|+.+++.|. +. |++|++++.+++..+.+.+.+..++.+|.+|++.++++ ++++|+|
T Consensus 2 ~ilVtGatG~iG~~l~~~L~----------~~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~D~~d~~~l~~~-~~~~d~v 70 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLL----------KKVPASQIIAIVRNVEKASTLADQGVEVRHGDYNQPESLQKA-FAGVSKL 70 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHT----------TTSCGGGEEEEESCTTTTHHHHHTTCEEEECCTTCHHHHHHH-TTTCSEE
T ss_pred eEEEEcCCchHHHHHHHHHH----------HhCCCCeEEEEEcCHHHHhHHhhcCCeEEEeccCCHHHHHHH-HhcCCEE
Confidence 5888987 999999999998 66 99999999999887777777899999999999999876 5678988
Q ss_pred EEEeCC---HHHHHH----HHHHHHHhC
Q 003861 610 MIMYTD---KKRTIE----AVQRLRLAF 630 (791)
Q Consensus 610 iv~~~~---d~~n~~----~~~~ar~l~ 630 (791)
+-+... ++.|+. ++..+++.+
T Consensus 71 i~~a~~~~~~~~n~~~~~~l~~a~~~~~ 98 (287)
T 2jl1_A 71 LFISGPHYDNTLLIVQHANVVKAARDAG 98 (287)
T ss_dssp EECCCCCSCHHHHHHHHHHHHHHHHHTT
T ss_pred EEcCCCCcCchHHHHHHHHHHHHHHHcC
Confidence 876653 222443 344555554
No 30
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=96.94 E-value=0.0037 Score=68.41 Aligned_cols=112 Identities=16% Similarity=0.101 Sum_probs=80.9
Q ss_pred cCCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 529 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 529 ~~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
...++++|+|+|.+|+.+++.|. +. .+|++.|.|+++.+++.+. ...+..|.+|.+.++++ ++++|.
T Consensus 14 ~~~~~v~IiGaG~iG~~ia~~L~----------~~-~~V~V~~R~~~~a~~la~~-~~~~~~d~~~~~~l~~l-l~~~Dv 80 (365)
T 2z2v_A 14 GRHMKVLILGAGNIGRAIAWDLK----------DE-FDVYIGDVNNENLEKVKEF-ATPLKVDASNFDKLVEV-MKEFEL 80 (365)
T ss_dssp --CCEEEEECCSHHHHHHHHHHT----------TT-SEEEEEESCHHHHHHHTTT-SEEEECCTTCHHHHHHH-HTTCSC
T ss_pred CCCCeEEEEcCCHHHHHHHHHHH----------cC-CeEEEEECCHHHHHHHHhh-CCeEEEecCCHHHHHHH-HhCCCE
Confidence 45678999999999999999997 45 8999999999999888764 34567899999988876 668999
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecC----hhhHHHHHHCCCCeE
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQD----MMHLLDLKKAGATDA 656 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~----~~~~~~L~~~Gad~V 656 (791)
||.+++.. .+..++..+-+.+ .+++--+.+ .+..+..++.|+..+
T Consensus 81 VIn~~P~~-~~~~v~~a~l~~G--~~~vD~s~~~~~~~~l~~~Ak~aG~~~l 129 (365)
T 2z2v_A 81 VIGALPGF-LGFKSIKAAIKSK--VDMVDVSFMPENPLELRDEAEKAQVTIV 129 (365)
T ss_dssp EEECCCHH-HHHHHHHHHHHTT--CCEEECCCCSSCGGGGHHHHHHTTCEEE
T ss_pred EEECCChh-hhHHHHHHHHHhC--CeEEEccCCcHHHHHHHHHHHHcCCEEE
Confidence 99987754 3334455554443 445444432 234566778887644
No 31
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=96.89 E-value=0.0037 Score=66.37 Aligned_cols=111 Identities=18% Similarity=0.100 Sum_probs=73.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
+.++.|+|+|.+|..+++.|. +.|++|++.|.++++.+.+.+.|......|..+ -++++|.|+
T Consensus 7 ~~~I~iIG~G~mG~~~a~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~~~~~~~e-------~~~~aDvvi 69 (303)
T 3g0o_A 7 DFHVGIVGLGSMGMGAARSCL----------RAGLSTWGADLNPQACANLLAEGACGAAASARE-------FAGVVDALV 69 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCSEEESSSTT-------TTTTCSEEE
T ss_pred CCeEEEECCCHHHHHHHHHHH----------HCCCeEEEEECCHHHHHHHHHcCCccccCCHHH-------HHhcCCEEE
Confidence 457999999999999999998 889999999999999999988876653333321 246899999
Q ss_pred EEeCCHHHHHHHH---HHH-HHhCCCCcEEEEecC--hhh----HHHHHHCCCCeEEcC
Q 003861 611 IMYTDKKRTIEAV---QRL-RLAFPAIPIYARAQD--MMH----LLDLKKAGATDAILE 659 (791)
Q Consensus 611 v~~~~d~~n~~~~---~~a-r~l~p~~~iiara~~--~~~----~~~L~~~Gad~Vi~p 659 (791)
++++++...-.+. ..+ ..+.|+ .+++-..+ +.. .+.+++.|+..+-.|
T Consensus 70 ~~vp~~~~~~~v~~~~~~l~~~l~~g-~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~p 127 (303)
T 3g0o_A 70 ILVVNAAQVRQVLFGEDGVAHLMKPG-SAVMVSSTISSADAQEIAAALTALNLNMLDAP 127 (303)
T ss_dssp ECCSSHHHHHHHHC--CCCGGGSCTT-CEEEECSCCCHHHHHHHHHHHHTTTCEEEECC
T ss_pred EECCCHHHHHHHHhChhhHHhhCCCC-CEEEecCCCCHHHHHHHHHHHHHcCCeEEeCC
Confidence 9999864332222 111 223344 34443332 222 234455677655444
No 32
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=96.84 E-value=0.0014 Score=64.52 Aligned_cols=73 Identities=16% Similarity=0.242 Sum_probs=60.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++|.|. |.+|+.+++.|. +.|++|++++.+++..+.....+..++.+|.+|++.++++ ++++|.+|
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~~d~vi 72 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAV----------QAGYEVTVLVRDSSRLPSEGPRPAHVVVGDVLQAADVDKT-VAGQDAVI 72 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCGGGSCSSSCCCSEEEESCTTSHHHHHHH-HTTCSEEE
T ss_pred CEEEEEcCCcHHHHHHHHHHH----------HCCCeEEEEEeChhhcccccCCceEEEEecCCCHHHHHHH-HcCCCEEE
Confidence 46899998 999999999998 7899999999998875544345788999999999998876 46789888
Q ss_pred EEeCC
Q 003861 611 IMYTD 615 (791)
Q Consensus 611 v~~~~ 615 (791)
-+.+.
T Consensus 73 ~~a~~ 77 (206)
T 1hdo_A 73 VLLGT 77 (206)
T ss_dssp ECCCC
T ss_pred ECccC
Confidence 77653
No 33
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=96.83 E-value=0.0067 Score=64.18 Aligned_cols=109 Identities=18% Similarity=0.165 Sum_probs=72.7
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
+.++.|+|+|.+|..+++.|. +.|++|++.|.|+++++++.+.|... .++.+-+ ++ +|.|+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~~~----~~-aDvvi 75 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRMT----------EWPGGVTVYDIRIEAMTPLAEAGATL----ADSVADV----AA-ADLIH 75 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHHT----------TSTTCEEEECSSTTTSHHHHHTTCEE----CSSHHHH----TT-SSEEE
T ss_pred CCeEEEECcCHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHCCCEE----cCCHHHH----Hh-CCEEE
Confidence 457999999999999999998 88999999999999999998877543 2333332 24 99999
Q ss_pred EEeCCHHHHHHHHHHHHH-hCCCCcEEEEecC--hhh----HHHHHHCCCCeEEcC
Q 003861 611 IMYTDKKRTIEAVQRLRL-AFPAIPIYARAQD--MMH----LLDLKKAGATDAILE 659 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~-l~p~~~iiara~~--~~~----~~~L~~~Gad~Vi~p 659 (791)
++++++...-.+...+.+ +.|+ .+++-..+ +.. .+.+++.|+..+-.|
T Consensus 76 ~~vp~~~~~~~v~~~l~~~l~~g-~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~p 130 (296)
T 3qha_A 76 ITVLDDAQVREVVGELAGHAKPG-TVIAIHSTISDTTAVELARDLKARDIHIVDAP 130 (296)
T ss_dssp ECCSSHHHHHHHHHHHHTTCCTT-CEEEECSCCCHHHHHHHHHHHGGGTCEEEECC
T ss_pred EECCChHHHHHHHHHHHHhcCCC-CEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 999986443333333333 3344 44443333 222 233455577655333
No 34
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=96.83 E-value=0.0037 Score=67.69 Aligned_cols=94 Identities=19% Similarity=0.241 Sum_probs=68.6
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
..+++.|+|+|.+|..+++.|. +.|++|++.|.|++..+.+.+.|.... .+.++.++++ .+++|.|
T Consensus 7 ~~~kIgIIG~G~mG~slA~~L~----------~~G~~V~~~dr~~~~~~~a~~~G~~~~---~~~~e~~~~a-~~~aDlV 72 (341)
T 3ktd_A 7 ISRPVCILGLGLIGGSLLRDLH----------AANHSVFGYNRSRSGAKSAVDEGFDVS---ADLEATLQRA-AAEDALI 72 (341)
T ss_dssp CSSCEEEECCSHHHHHHHHHHH----------HTTCCEEEECSCHHHHHHHHHTTCCEE---SCHHHHHHHH-HHTTCEE
T ss_pred CCCEEEEEeecHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCeee---CCHHHHHHhc-ccCCCEE
Confidence 3457999999999999999998 789999999999999999988887431 1224556555 5678999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEEe
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYARA 639 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiara 639 (791)
+++++.+ ....+...++...|+ .++.-+
T Consensus 73 ilavP~~-~~~~vl~~l~~~~~~-~iv~Dv 100 (341)
T 3ktd_A 73 VLAVPMT-AIDSLLDAVHTHAPN-NGFTDV 100 (341)
T ss_dssp EECSCHH-HHHHHHHHHHHHCTT-CCEEEC
T ss_pred EEeCCHH-HHHHHHHHHHccCCC-CEEEEc
Confidence 9999854 333444455555555 344333
No 35
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=96.79 E-value=0.0055 Score=65.04 Aligned_cols=124 Identities=12% Similarity=0.130 Sum_probs=81.1
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++.|+|+|++|+.+++.|. ..|.+|++.|.++++.+.+.+.|..++. .+.++++ ++++|.|+
T Consensus 157 g~~v~IiG~G~iG~~~a~~l~----------~~G~~V~~~d~~~~~~~~~~~~g~~~~~-----~~~l~~~-l~~aDvVi 220 (300)
T 2rir_A 157 GSQVAVLGLGRTGMTIARTFA----------ALGANVKVGARSSAHLARITEMGLVPFH-----TDELKEH-VKDIDICI 220 (300)
T ss_dssp TSEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHTTCEEEE-----GGGHHHH-STTCSEEE
T ss_pred CCEEEEEcccHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHCCCeEEc-----hhhHHHH-hhCCCEEE
Confidence 357999999999999999998 7899999999999887777666655432 1224332 57899999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEEecCh--hhHHHHHHCCCCeEEcCcHHHHH--HHHHHHHh
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQDM--MHLLDLKKAGATDAILENAETSL--QLGSKLLK 673 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiara~~~--~~~~~L~~~Gad~Vi~p~~~~~~--~la~~~l~ 673 (791)
.+++....|- ...+.+.|+..+|-.++.+ ...+..++.|+..+..|...++. ..+..++.
T Consensus 221 ~~~p~~~i~~---~~~~~mk~g~~lin~a~g~~~~~~~~a~~~G~~~i~~pg~~g~v~~a~a~~l~~ 284 (300)
T 2rir_A 221 NTIPSMILNQ---TVLSSMTPKTLILDLASRPGGTDFKYAEKQGIKALLAPGLPGIVAPKTAGQILA 284 (300)
T ss_dssp ECCSSCCBCH---HHHTTSCTTCEEEECSSTTCSBCHHHHHHHTCEEEECCCHHHHHCHHHHHHHHH
T ss_pred ECCChhhhCH---HHHHhCCCCCEEEEEeCCCCCcCHHHHHHCCCEEEECCCCCCcHHHHHHHHHHH
Confidence 9988643221 1334455554454444432 11356677899777677554432 33344443
No 36
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=96.75 E-value=0.0049 Score=64.03 Aligned_cols=88 Identities=19% Similarity=0.261 Sum_probs=67.0
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCC--CCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~--g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
+++|.|. |.+|+.+++.|. +. |++|++++.+++..+.+.+.+..++.+|.+|++.++++ ++++|+|
T Consensus 1 ~ilVtGatG~iG~~l~~~L~----------~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~v 69 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLM----------KTVPASQIVAIVRNPAKAQALAAQGITVRQADYGDEAALTSA-LQGVEKL 69 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHT----------TTSCGGGEEEEESCTTTCHHHHHTTCEEEECCTTCHHHHHHH-TTTCSEE
T ss_pred CEEEEcCCchHHHHHHHHHH----------hhCCCceEEEEEcChHhhhhhhcCCCeEEEcCCCCHHHHHHH-HhCCCEE
Confidence 3678887 999999999998 66 99999999998887777777899999999999999876 5678988
Q ss_pred EEEeCCH-----HHHHHHHHHHHHhCC
Q 003861 610 MIMYTDK-----KRTIEAVQRLRLAFP 631 (791)
Q Consensus 610 iv~~~~d-----~~n~~~~~~ar~l~p 631 (791)
+-+.+.. .....+...+++.+.
T Consensus 70 i~~a~~~~~~~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 70 LLISSSEVGQRAPQHRNVINAAKAAGV 96 (286)
T ss_dssp EECC--------CHHHHHHHHHHHHTC
T ss_pred EEeCCCCchHHHHHHHHHHHHHHHcCC
Confidence 8765532 122334455666553
No 37
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=96.70 E-value=0.0095 Score=63.34 Aligned_cols=106 Identities=18% Similarity=0.221 Sum_probs=71.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCC-HHHHHhcCCCCCcEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASR-PAVLLSAGITSPKAV 609 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~-~~~L~~agi~~a~~v 609 (791)
..++.|+|+|.+|..+++.|. +.|++|++.|.++++.+++.+.|... .++ .+.++ ++|.|
T Consensus 9 ~~~IgiIG~G~mG~~~A~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~----~~~~~e~~~-----~aDvV 69 (306)
T 3l6d_A 9 EFDVSVIGLGAMGTIMAQVLL----------KQGKRVAIWNRSPGKAAALVAAGAHL----CESVKAALS-----ASPAT 69 (306)
T ss_dssp SCSEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSHHHHHHHHHHTCEE----CSSHHHHHH-----HSSEE
T ss_pred CCeEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHCCCee----cCCHHHHHh-----cCCEE
Confidence 457999999999999999998 88999999999999999988877532 233 33443 58999
Q ss_pred EEEeCCHHHHHHHHH--HHHHhCCCCcEEEEecC--h----hhHHHHHHCCCCeE
Q 003861 610 MIMYTDKKRTIEAVQ--RLRLAFPAIPIYARAQD--M----MHLLDLKKAGATDA 656 (791)
Q Consensus 610 iv~~~~d~~n~~~~~--~ar~l~p~~~iiara~~--~----~~~~~L~~~Gad~V 656 (791)
+++++++...-.+.. .+....|+ .+++-..+ + +-.+.+++.|+..+
T Consensus 70 i~~vp~~~~~~~v~~~~~l~~~~~g-~ivid~st~~~~~~~~l~~~~~~~g~~~v 123 (306)
T 3l6d_A 70 IFVLLDNHATHEVLGMPGVARALAH-RTIVDYTTNAQDEGLALQGLVNQAGGHYV 123 (306)
T ss_dssp EECCSSHHHHHHHHTSTTHHHHTTT-CEEEECCCCCTTHHHHHHHHHHHTTCEEE
T ss_pred EEEeCCHHHHHHHhcccchhhccCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEE
Confidence 999998753333322 33445555 44443332 2 22334566677654
No 38
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.67 E-value=0.0044 Score=69.84 Aligned_cols=95 Identities=14% Similarity=0.001 Sum_probs=72.5
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh-hHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~-~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
++++|+|.|+.|...++.|. +.|.+|+++|.+.. ..+.+.+ .+..++.++..+. .+++++.|
T Consensus 13 ~~vlVvGgG~va~~k~~~L~----------~~ga~V~vi~~~~~~~~~~l~~~~~i~~~~~~~~~~------~l~~~~lV 76 (457)
T 1pjq_A 13 RDCLIVGGGDVAERKARLLL----------EAGARLTVNALTFIPQFTVWANEGMLTLVEGPFDET------LLDSCWLA 76 (457)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTBEEEEEESSCCHHHHHHHTTTSCEEEESSCCGG------GGTTCSEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCcCEEEEEcCCCCHHHHHHHhcCCEEEEECCCCcc------ccCCccEE
Confidence 47999999999999999998 89999999998643 3344433 4577777765432 34689999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhH
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHL 645 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~ 645 (791)
|+++++++.|..++..+|+.+ ++ +-.+++++..
T Consensus 77 i~at~~~~~n~~i~~~a~~~~--i~-vn~~d~~e~~ 109 (457)
T 1pjq_A 77 IAATDDDTVNQRVSDAAESRR--IF-CNVVDAPKAA 109 (457)
T ss_dssp EECCSCHHHHHHHHHHHHHTT--CE-EEETTCTTSS
T ss_pred EEcCCCHHHHHHHHHHHHHcC--CE-EEECCCcccC
Confidence 999998889999999999975 33 4455666553
No 39
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=96.66 E-value=0.0099 Score=63.62 Aligned_cols=109 Identities=16% Similarity=0.231 Sum_probs=74.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
.++.|+|+|.+|..+++.|. +.|++|++.|.++++.+++.+.|.... ++.+-+ ++++|.|++
T Consensus 32 ~~I~iIG~G~mG~~~a~~l~----------~~G~~V~~~dr~~~~~~~l~~~g~~~~----~~~~e~----~~~aDvVi~ 93 (320)
T 4dll_A 32 RKITFLGTGSMGLPMARRLC----------EAGYALQVWNRTPARAASLAALGATIH----EQARAA----ARDADIVVS 93 (320)
T ss_dssp SEEEEECCTTTHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHTTTCEEE----SSHHHH----HTTCSEEEE
T ss_pred CEEEEECccHHHHHHHHHHH----------hCCCeEEEEcCCHHHHHHHHHCCCEee----CCHHHH----HhcCCEEEE
Confidence 47999999999999999998 789999999999999999988765432 233222 357899999
Q ss_pred EeCCHHHHHHHH---HHHHHhCCCCcEEEEecC--hh----hHHHHHHCCCCeEEcC
Q 003861 612 MYTDKKRTIEAV---QRLRLAFPAIPIYARAQD--MM----HLLDLKKAGATDAILE 659 (791)
Q Consensus 612 ~~~~d~~n~~~~---~~ar~l~p~~~iiara~~--~~----~~~~L~~~Gad~Vi~p 659 (791)
+++++...-.+. ..+..+.++ .+++-..+ +. -.+.+++.|+..+-.|
T Consensus 94 ~vp~~~~~~~v~~~~~~~~~l~~~-~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~p 149 (320)
T 4dll_A 94 MLENGAVVQDVLFAQGVAAAMKPG-SLFLDMASITPREARDHAARLGALGIAHLDTP 149 (320)
T ss_dssp CCSSHHHHHHHHTTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred ECCCHHHHHHHHcchhHHhhCCCC-CEEEecCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 999865433333 233445555 44443333 22 2234566788766444
No 40
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=96.66 E-value=0.0058 Score=64.87 Aligned_cols=112 Identities=18% Similarity=0.193 Sum_probs=73.6
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
++++|-++|+|.+|..+++.|. +.|++|++.|.++++++++.+.|..+. .+++ + =++++|.+
T Consensus 4 Ms~kIgfIGLG~MG~~mA~~L~----------~~G~~V~v~dr~~~~~~~l~~~G~~~~----~s~~---e-~~~~~dvv 65 (297)
T 4gbj_A 4 MSEKIAFLGLGNLGTPIAEILL----------EAGYELVVWNRTASKAEPLTKLGATVV----ENAI---D-AITPGGIV 65 (297)
T ss_dssp CCCEEEEECCSTTHHHHHHHHH----------HTTCEEEEC-------CTTTTTTCEEC----SSGG---G-GCCTTCEE
T ss_pred CCCcEEEEecHHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHcCCeEe----CCHH---H-HHhcCCce
Confidence 4567999999999999999998 899999999999999998888775542 2222 1 14678999
Q ss_pred EEEeCCHHHHHHH--HHHHHHhCCCCcEEEEecC------hhhHHHHHHCCCCeEEcCc
Q 003861 610 MIMYTDKKRTIEA--VQRLRLAFPAIPIYARAQD------MMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 610 iv~~~~d~~n~~~--~~~ar~l~p~~~iiara~~------~~~~~~L~~~Gad~Vi~p~ 660 (791)
+++.+++.....+ ...+....++ .+++-..+ .+..+.+++.|+..+=.|-
T Consensus 66 i~~l~~~~~~~~v~~~~~~~~~~~~-~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapV 123 (297)
T 4gbj_A 66 FSVLADDAAVEELFSMELVEKLGKD-GVHVSMSTISPETSRQLAQVHEWYGAHYVGAPI 123 (297)
T ss_dssp EECCSSHHHHHHHSCHHHHHHHCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECCE
T ss_pred eeeccchhhHHHHHHHHHHhhcCCC-eEEEECCCCChHHHHHHHHHHHhcCCceecCCc
Confidence 9999987543332 2345556655 45554332 3344567788998887765
No 41
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=96.66 E-value=0.009 Score=62.76 Aligned_cols=108 Identities=18% Similarity=0.152 Sum_probs=72.0
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMIM 612 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~ 612 (791)
++.|+|+|.+|..+++.|. +.|++|++.|.++++.+++.+.|.... .+-.+.+ +++|.|+++
T Consensus 3 ~i~iIG~G~mG~~~a~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~~---~~~~~~~-----~~aDvvi~~ 64 (287)
T 3pef_A 3 KFGFIGLGIMGSAMAKNLV----------KAGCSVTIWNRSPEKAEELAALGAERA---ATPCEVV-----ESCPVTFAM 64 (287)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSGGGGHHHHHTTCEEC---SSHHHHH-----HHCSEEEEC
T ss_pred EEEEEeecHHHHHHHHHHH----------HCCCeEEEEcCCHHHHHHHHHCCCeec---CCHHHHH-----hcCCEEEEE
Confidence 6899999999999999998 789999999999999999988765331 1222333 357999999
Q ss_pred eCCHHHHHHHH---HHH-HHhCCCCcEEEEecC--hh----hHHHHHHCCCCeEEcC
Q 003861 613 YTDKKRTIEAV---QRL-RLAFPAIPIYARAQD--MM----HLLDLKKAGATDAILE 659 (791)
Q Consensus 613 ~~~d~~n~~~~---~~a-r~l~p~~~iiara~~--~~----~~~~L~~~Gad~Vi~p 659 (791)
++++...-.+. ..+ ..+.++ .+++-..+ +. -.+.+++.|+..+-.|
T Consensus 65 vp~~~~~~~v~~~~~~l~~~l~~~-~~vi~~st~~~~~~~~~~~~~~~~g~~~~~~p 120 (287)
T 3pef_A 65 LADPAAAEEVCFGKHGVLEGIGEG-RGYVDMSTVDPATSQRIGVAVVAKGGRFLEAP 120 (287)
T ss_dssp CSSHHHHHHHHHSTTCHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHcCcchHhhcCCCC-CEEEeCCCCCHHHHHHHHHHHHHhCCEEEECC
Confidence 99764433333 222 334455 44444333 22 2334566677655444
No 42
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=96.61 E-value=0.0066 Score=64.33 Aligned_cols=90 Identities=18% Similarity=0.223 Sum_probs=69.0
Q ss_pred CCCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh-hHH---HHHhcCCCEEEccCCCHHHHHhcCCC
Q 003861 530 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVK---ESRKLGFPILYGDASRPAVLLSAGIT 604 (791)
Q Consensus 530 ~~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~-~v~---~~~~~~~~~v~GD~t~~~~L~~agi~ 604 (791)
+.++++|.|. |.+|+.+++.|. +.|++|++++.+++ ..+ .+.+.+..++.+|.+|++.++++ ++
T Consensus 10 m~~~ilVtGatG~iG~~l~~~L~----------~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a-~~ 78 (318)
T 2r6j_A 10 MKSKILIFGGTGYIGNHMVKGSL----------KLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVEL-MK 78 (318)
T ss_dssp CCCCEEEETTTSTTHHHHHHHHH----------HTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHH-HT
T ss_pred CCCeEEEECCCchHHHHHHHHHH----------HCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHH-Hc
Confidence 3457999996 999999999998 78999999999874 332 34567899999999999999876 45
Q ss_pred CCcEEEEEeCCH--HHHHHHHHHHHHhC
Q 003861 605 SPKAVMIMYTDK--KRTIEAVQRLRLAF 630 (791)
Q Consensus 605 ~a~~viv~~~~d--~~n~~~~~~ar~l~ 630 (791)
.+|+|+.+.+.. .....++..+++.+
T Consensus 79 ~~d~vi~~a~~~~~~~~~~l~~aa~~~g 106 (318)
T 2r6j_A 79 KVDVVISALAFPQILDQFKILEAIKVAG 106 (318)
T ss_dssp TCSEEEECCCGGGSTTHHHHHHHHHHHC
T ss_pred CCCEEEECCchhhhHHHHHHHHHHHhcC
Confidence 689888877642 22344556677765
No 43
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=96.59 E-value=0.012 Score=62.23 Aligned_cols=109 Identities=17% Similarity=0.197 Sum_probs=72.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
.++.|+|+|.+|..+++.|. +.|++|+++|.++++.+.+.+.|... .++.+-+ ++++|.|++
T Consensus 4 ~~I~iiG~G~mG~~~a~~l~----------~~G~~V~~~d~~~~~~~~~~~~g~~~----~~~~~~~----~~~aDvvi~ 65 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNLL----------KAGYLLNVFDLVQSAVDGLVAAGASA----ARSARDA----VQGADVVIS 65 (302)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHHTTCEE----CSSHHHH----HTTCSEEEE
T ss_pred CEEEEEeecHHHHHHHHHHH----------hCCCeEEEEcCCHHHHHHHHHCCCeE----cCCHHHH----HhCCCeEEE
Confidence 36899999999999999998 78999999999999999998876542 2333222 257899999
Q ss_pred EeCCHHHHHHHHH---HHH-HhCCCCcEEEEec--Chh----hHHHHHHCCCCeEEcC
Q 003861 612 MYTDKKRTIEAVQ---RLR-LAFPAIPIYARAQ--DMM----HLLDLKKAGATDAILE 659 (791)
Q Consensus 612 ~~~~d~~n~~~~~---~ar-~l~p~~~iiara~--~~~----~~~~L~~~Gad~Vi~p 659 (791)
+++++..--.+.. .+. .+.++ .+++-.. .+. -.+.+++.|+..+-.|
T Consensus 66 ~vp~~~~~~~v~~~~~~~~~~l~~~-~~vi~~st~~~~~~~~l~~~~~~~g~~~~~~p 122 (302)
T 2h78_A 66 MLPASQHVEGLYLDDDGLLAHIAPG-TLVLECSTIAPTSARKIHAAARERGLAMLDAP 122 (302)
T ss_dssp CCSCHHHHHHHHHSSSCGGGSSCSS-CEEEECSCCCHHHHHHHHHHHHHTTCCEEECC
T ss_pred ECCCHHHHHHHHcCchhHHhcCCCC-cEEEECCCCCHHHHHHHHHHHHHcCCEEEEEE
Confidence 9987653333332 122 23444 3444422 222 2334566688766444
No 44
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=96.58 E-value=0.0082 Score=63.96 Aligned_cols=109 Identities=17% Similarity=0.142 Sum_probs=72.1
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
.++.|+|+|.+|..+++.|. +.|++|++.|.++++++++.+.|... -.+..+.+ +++|.|++
T Consensus 22 ~~I~iIG~G~mG~~~A~~l~----------~~G~~V~~~dr~~~~~~~l~~~g~~~---~~~~~~~~-----~~aDvvi~ 83 (310)
T 3doj_A 22 MEVGFLGLGIMGKAMSMNLL----------KNGFKVTVWNRTLSKCDELVEHGASV---CESPAEVI-----KKCKYTIA 83 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSGGGGHHHHHTTCEE---CSSHHHHH-----HHCSEEEE
T ss_pred CEEEEECccHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHCCCeE---cCCHHHHH-----HhCCEEEE
Confidence 47999999999999999998 78999999999999999998877543 11223333 35799999
Q ss_pred EeCCHHHHHHHH---HHH-HHhCCCCcEEEEecC--h----hhHHHHHHCCCCeEEcC
Q 003861 612 MYTDKKRTIEAV---QRL-RLAFPAIPIYARAQD--M----MHLLDLKKAGATDAILE 659 (791)
Q Consensus 612 ~~~~d~~n~~~~---~~a-r~l~p~~~iiara~~--~----~~~~~L~~~Gad~Vi~p 659 (791)
+++++...-.+. ..+ ..+.++ .+++-..+ + +-.+.+++.|+..+-.|
T Consensus 84 ~vp~~~~~~~v~~~~~~l~~~l~~g-~~vv~~st~~~~~~~~~~~~~~~~g~~~v~~p 140 (310)
T 3doj_A 84 MLSDPCAALSVVFDKGGVLEQICEG-KGYIDMSTVDAETSLKINEAITGKGGRFVEGP 140 (310)
T ss_dssp CCSSHHHHHHHHHSTTCGGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred EcCCHHHHHHHHhCchhhhhccCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 998764333322 111 223344 44544433 2 22344566787665444
No 45
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=96.54 E-value=0.0061 Score=63.44 Aligned_cols=68 Identities=21% Similarity=0.383 Sum_probs=60.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
..+++|.|.|.+|+.+++.|. +.|++|++++.+++..+.+.+.+..++.+|.+|.+ .+++|+||
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~------~~~~d~vi 68 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRALA----------PQGWRIIGTSRNPDQMEAIRASGAEPLLWPGEEPS------LDGVTHLL 68 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHHG----------GGTCEEEEEESCGGGHHHHHHTTEEEEESSSSCCC------CTTCCEEE
T ss_pred cCcEEEECCcHHHHHHHHHHH----------HCCCEEEEEEcChhhhhhHhhCCCeEEEecccccc------cCCCCEEE
Confidence 457999999999999999998 78999999999999988888889999999999944 67899888
Q ss_pred EEeC
Q 003861 611 IMYT 614 (791)
Q Consensus 611 v~~~ 614 (791)
-+..
T Consensus 69 ~~a~ 72 (286)
T 3ius_A 69 ISTA 72 (286)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 8764
No 46
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=96.51 E-value=0.011 Score=62.28 Aligned_cols=109 Identities=15% Similarity=0.096 Sum_probs=70.7
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCH-HHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~-~~L~~agi~~a~~vi 610 (791)
.++.|+|+|.+|+.+++.|. +.|++|+++|.++++.+.+.+.|... .++. +.+ +++|.|+
T Consensus 5 ~~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~~-----~~~D~vi 65 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINLL----------KEGVTVYAFDLMEANVAAVVAQGAQA----CENNQKVA-----AASDIIF 65 (301)
T ss_dssp CEEEEECCCTTHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHTTTCEE----CSSHHHHH-----HHCSEEE
T ss_pred CEEEEECccHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHCCCee----cCCHHHHH-----hCCCEEE
Confidence 46999999999999999998 78999999999999999888776542 2233 333 3589999
Q ss_pred EEeCCHHHHHHHHH---HH-HHhCCCCcEEEEecCh-hhH----HHHHHCCCCeEEcC
Q 003861 611 IMYTDKKRTIEAVQ---RL-RLAFPAIPIYARAQDM-MHL----LDLKKAGATDAILE 659 (791)
Q Consensus 611 v~~~~d~~n~~~~~---~a-r~l~p~~~iiara~~~-~~~----~~L~~~Gad~Vi~p 659 (791)
++++++...-.+.. .+ ..+.++..++...+-. ... +.+.+.|+..+-.|
T Consensus 66 ~~vp~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~g~~~~~~p 123 (301)
T 3cky_A 66 TSLPNAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEKGIDYVDAP 123 (301)
T ss_dssp ECCSSHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred EECCCHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEEcc
Confidence 99987654333332 23 3345554444433332 222 33445566554334
No 47
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=96.51 E-value=0.0061 Score=64.03 Aligned_cols=73 Identities=26% Similarity=0.337 Sum_probs=60.9
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCC-CcEEEEcCChhhH--HHHHhcCCCEEEccCCCHHHHHhcCCCCC
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVV--KESRKLGFPILYGDASRPAVLLSAGITSP 606 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g-~~vvvID~d~~~v--~~~~~~~~~~v~GD~t~~~~L~~agi~~a 606 (791)
++.++|.|. |.+|+.+++.|. +.| ++|++++.+++.. +.+...+..++.+|.+|++.++++ ++.+
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~----------~~g~~~V~~~~R~~~~~~~~~l~~~~~~~~~~D~~d~~~l~~~-~~~~ 73 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLL----------EDGTFKVRVVTRNPRKKAAKELRLQGAEVVQGDQDDQVIMELA-LNGA 73 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH----------HHCSSEEEEEESCTTSHHHHHHHHTTCEEEECCTTCHHHHHHH-HTTC
T ss_pred CCEEEEECCCchHHHHHHHHHH----------hcCCceEEEEEcCCCCHHHHHHHHCCCEEEEecCCCHHHHHHH-HhcC
Confidence 457999998 999999999998 677 9999999988763 445567899999999999999876 4568
Q ss_pred cEEEEEeC
Q 003861 607 KAVMIMYT 614 (791)
Q Consensus 607 ~~viv~~~ 614 (791)
|.++.+.+
T Consensus 74 d~vi~~a~ 81 (299)
T 2wm3_A 74 YATFIVTN 81 (299)
T ss_dssp SEEEECCC
T ss_pred CEEEEeCC
Confidence 98887765
No 48
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=96.51 E-value=0.0028 Score=63.45 Aligned_cols=84 Identities=13% Similarity=0.122 Sum_probs=67.7
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++|.|. |.+|+.+++.|. +.|++|++++.+++..+.+.+.+..++.+|.+|++. +. ++++|+||-
T Consensus 2 kilVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~~~~~~~~~~D~~d~~~-~~--~~~~d~vi~ 68 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEAR----------RRGHEVLAVVRDPQKAADRLGATVATLVKEPLVLTE-AD--LDSVDAVVD 68 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHTCTTSEEEECCGGGCCH-HH--HTTCSEEEE
T ss_pred EEEEEcCCCHHHHHHHHHHH----------HCCCEEEEEEecccccccccCCCceEEecccccccH-hh--cccCCEEEE
Confidence 3789997 999999999998 789999999999999888777889999999999887 33 457898887
Q ss_pred EeCC------HHHHHHHHHHHHHh
Q 003861 612 MYTD------KKRTIEAVQRLRLA 629 (791)
Q Consensus 612 ~~~~------d~~n~~~~~~ar~l 629 (791)
+.+. ...|+..+..+-+.
T Consensus 69 ~ag~~~~~~~~~~n~~~~~~l~~a 92 (224)
T 3h2s_A 69 ALSVPWGSGRGYLHLDFATHLVSL 92 (224)
T ss_dssp CCCCCTTSSCTHHHHHHHHHHHHT
T ss_pred CCccCCCcchhhHHHHHHHHHHHH
Confidence 7744 34566665555443
No 49
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=96.51 E-value=0.0096 Score=63.25 Aligned_cols=108 Identities=18% Similarity=0.202 Sum_probs=77.2
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMIM 612 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~ 612 (791)
+|-++|+|.+|..+++.|. +.|++|++.|.++++++.+.+.|..+ +.+++-+ ++++|.++.+
T Consensus 5 kIgfIGlG~MG~~mA~~L~----------~~G~~v~v~dr~~~~~~~l~~~Ga~~----a~s~~e~----~~~~dvv~~~ 66 (300)
T 3obb_A 5 QIAFIGLGHMGAPMATNLL----------KAGYLLNVFDLVQSAVDGLVAAGASA----ARSARDA----VQGADVVISM 66 (300)
T ss_dssp EEEEECCSTTHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHHTTCEE----CSSHHHH----HTTCSEEEEC
T ss_pred EEEEeeehHHHHHHHHHHH----------hCCCeEEEEcCCHHHHHHHHHcCCEE----cCCHHHH----HhcCCceeec
Confidence 5889999999999999998 89999999999999999999887543 2333332 3679999999
Q ss_pred eCCHHHHHHHHHH----HHHhCCCCcEEEEecC------hhhHHHHHHCCCCeEEcC
Q 003861 613 YTDKKRTIEAVQR----LRLAFPAIPIYARAQD------MMHLLDLKKAGATDAILE 659 (791)
Q Consensus 613 ~~~d~~n~~~~~~----ar~l~p~~~iiara~~------~~~~~~L~~~Gad~Vi~p 659 (791)
.++++.--.+... +..+.|+ .+++-..+ .+..+.+++.|++.+=.|
T Consensus 67 l~~~~~v~~V~~~~~g~~~~~~~g-~iiId~sT~~p~~~~~~a~~~~~~G~~~lDaP 122 (300)
T 3obb_A 67 LPASQHVEGLYLDDDGLLAHIAPG-TLVLECSTIAPTSARKIHAAARERGLAMLDAP 122 (300)
T ss_dssp CSCHHHHHHHHHSSSSSTTSCCC--CEEEECSCCCHHHHHHHHHHHHTTTCEEEECC
T ss_pred CCchHHHHHHHhchhhhhhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEecC
Confidence 9987654444332 1222333 45554442 344566678899887666
No 50
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=96.51 E-value=0.0068 Score=63.89 Aligned_cols=88 Identities=19% Similarity=0.241 Sum_probs=67.5
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCC-----hhhHHH---HHhcCCCEEEccCCCHHHHHhcC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLN-----PSVVKE---SRKLGFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d-----~~~v~~---~~~~~~~~v~GD~t~~~~L~~ag 602 (791)
++++|.|. |.+|+.+++.|. +.|++|++++.+ +++.+. +...+..++.||.+|++.++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~- 73 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASI----------SLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDA- 73 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHH----------HTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHH-
T ss_pred CEEEEEcCCcHHHHHHHHHHH----------hCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHH-
Confidence 46999995 999999999998 789999999998 455443 3456899999999999999876
Q ss_pred CCCCcEEEEEeCCH------HHHHHHHHHHHHhC
Q 003861 603 ITSPKAVMIMYTDK------KRTIEAVQRLRLAF 630 (791)
Q Consensus 603 i~~a~~viv~~~~d------~~n~~~~~~ar~l~ 630 (791)
++.+|+|+.+.+.. .....++..+++.+
T Consensus 74 ~~~~d~vi~~a~~~~~~~~~~~~~~l~~aa~~~g 107 (313)
T 1qyd_A 74 LKQVDVVISALAGGVLSHHILEQLKLVEAIKEAG 107 (313)
T ss_dssp HTTCSEEEECCCCSSSSTTTTTHHHHHHHHHHSC
T ss_pred HhCCCEEEECCccccchhhHHHHHHHHHHHHhcC
Confidence 46789888776532 23344556666664
No 51
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=96.45 E-value=0.0072 Score=63.04 Aligned_cols=88 Identities=14% Similarity=0.059 Sum_probs=69.4
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCC-CCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTV-GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~-g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
+++|.|. |.+|+.+++.|. +. |++|++++.+++..+.+.+.+..++.+|.+|++.++++ ++++|+|+
T Consensus 2 ~ilVtGatG~iG~~l~~~L~----------~~~g~~V~~~~R~~~~~~~~~~~~v~~~~~D~~d~~~l~~~-~~~~d~vi 70 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAI----------ANHIDHFHIGVRNVEKVPDDWRGKVSVRQLDYFNQESMVEA-FKGMDTVV 70 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHH----------HTTCTTEEEEESSGGGSCGGGBTTBEEEECCTTCHHHHHHH-TTTCSEEE
T ss_pred EEEEEcCCchHHHHHHHHHh----------hCCCCcEEEEECCHHHHHHhhhCCCEEEEcCCCCHHHHHHH-HhCCCEEE
Confidence 4788985 999999999998 55 99999999999987777778899999999999999876 46789888
Q ss_pred EEeCC---HHHHH----HHHHHHHHhCC
Q 003861 611 IMYTD---KKRTI----EAVQRLRLAFP 631 (791)
Q Consensus 611 v~~~~---d~~n~----~~~~~ar~l~p 631 (791)
-+.+. ...|+ .++..+++.+.
T Consensus 71 ~~a~~~~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 71 FIPSIIHPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp ECCCCCCSHHHHHHHHHHHHHHHHHTTC
T ss_pred EeCCCCccchhhHHHHHHHHHHHHHcCC
Confidence 77653 22333 34555666553
No 52
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=96.43 E-value=0.0017 Score=69.58 Aligned_cols=95 Identities=17% Similarity=0.136 Sum_probs=62.3
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcC--ChhhHHHHHhcCCCEEEc------cCCCHHHHHhcCCC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL--NPSVVKESRKLGFPILYG------DASRPAVLLSAGIT 604 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~--d~~~v~~~~~~~~~~v~G------D~t~~~~L~~agi~ 604 (791)
++.|+|.|.+|..++..|. +.|++|+++|. ++++.+.+.+.+.+..+| +.++++.++++ ++
T Consensus 2 ~I~iiG~G~mG~~~a~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~ 70 (335)
T 1txg_A 2 IVSILGAGAMGSALSVPLV----------DNGNEVRIWGTEFDTEILKSISAGREHPRLGVKLNGVEIFWPEQLEKC-LE 70 (335)
T ss_dssp EEEEESCCHHHHHHHHHHH----------HHCCEEEEECCGGGHHHHHHHHTTCCBTTTTBCCCSEEEECGGGHHHH-HT
T ss_pred EEEEECcCHHHHHHHHHHH----------hCCCeEEEEEccCCHHHHHHHHHhCcCcccCccccceEEecHHhHHHH-Hh
Confidence 4789999999999999998 78999999999 999999888766421111 12222223222 46
Q ss_pred CCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEe
Q 003861 605 SPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARA 639 (791)
Q Consensus 605 ~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara 639 (791)
++|.|++++.++...-. ...++.+.|+..++...
T Consensus 71 ~~D~vi~~v~~~~~~~v-~~~i~~l~~~~~vv~~~ 104 (335)
T 1txg_A 71 NAEVVLLGVSTDGVLPV-MSRILPYLKDQYIVLIS 104 (335)
T ss_dssp TCSEEEECSCGGGHHHH-HHHHTTTCCSCEEEECC
T ss_pred cCCEEEEcCChHHHHHH-HHHHhcCCCCCEEEEEc
Confidence 89999999988643222 22222244443344433
No 53
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=96.42 E-value=0.012 Score=61.35 Aligned_cols=87 Identities=16% Similarity=0.195 Sum_probs=61.3
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCE-EEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPI-LYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~-v~GD~t~~~~L~~agi~~a~~viv 611 (791)
++.|+|+|.+|..+++.|. +.|++|+++|.++++.+.+.+.|... .. ++ ++++ +++|.|++
T Consensus 2 ~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~~~~~~~~~~~~~g~~~~~~---~~---~~~~--~~~D~vi~ 63 (279)
T 2f1k_A 2 KIGVVGLGLIGASLAGDLR----------RRGHYLIGVSRQQSTCEKAVERQLVDEAG---QD---LSLL--QTAKIIFL 63 (279)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTSCSEEE---SC---GGGG--TTCSEEEE
T ss_pred EEEEEcCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHhCCCCcccc---CC---HHHh--CCCCEEEE
Confidence 4789999999999999998 78999999999999998888766531 11 12 3445 68999999
Q ss_pred EeCCHHHHHHHHHHHHH-hCCCCcEEEEe
Q 003861 612 MYTDKKRTIEAVQRLRL-AFPAIPIYARA 639 (791)
Q Consensus 612 ~~~~d~~n~~~~~~ar~-l~p~~~iiara 639 (791)
+++.+. ...++..++. +.|+ .+++..
T Consensus 64 av~~~~-~~~~~~~l~~~~~~~-~~vv~~ 90 (279)
T 2f1k_A 64 CTPIQL-ILPTLEKLIPHLSPT-AIVTDV 90 (279)
T ss_dssp CSCHHH-HHHHHHHHGGGSCTT-CEEEEC
T ss_pred ECCHHH-HHHHHHHHHhhCCCC-CEEEEC
Confidence 998653 2233333333 3344 355544
No 54
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=96.39 E-value=0.01 Score=61.97 Aligned_cols=66 Identities=12% Similarity=0.185 Sum_probs=53.5
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMIM 612 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~ 612 (791)
++.|+|+|.+|..+++.|. + |++|+++|.++++.+.+.+.|.... + .++. ++++|.|+++
T Consensus 3 ~i~iiG~G~~G~~~a~~l~----------~-g~~V~~~~~~~~~~~~~~~~g~~~~--~--~~~~-----~~~~D~vi~~ 62 (289)
T 2cvz_A 3 KVAFIGLGAMGYPMAGHLA----------R-RFPTLVWNRTFEKALRHQEEFGSEA--V--PLER-----VAEARVIFTC 62 (289)
T ss_dssp CEEEECCSTTHHHHHHHHH----------T-TSCEEEECSSTHHHHHHHHHHCCEE--C--CGGG-----GGGCSEEEEC
T ss_pred eEEEEcccHHHHHHHHHHh----------C-CCeEEEEeCCHHHHHHHHHCCCccc--C--HHHH-----HhCCCEEEEe
Confidence 5889999999999999998 8 9999999999999988877665542 1 2222 3579999999
Q ss_pred eCCHHH
Q 003861 613 YTDKKR 618 (791)
Q Consensus 613 ~~~d~~ 618 (791)
++++..
T Consensus 63 v~~~~~ 68 (289)
T 2cvz_A 63 LPTTRE 68 (289)
T ss_dssp CSSHHH
T ss_pred CCChHH
Confidence 998753
No 55
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=96.39 E-value=0.0099 Score=62.43 Aligned_cols=108 Identities=17% Similarity=0.122 Sum_probs=70.5
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMIM 612 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~ 612 (791)
++.|+|+|.+|..+++.|. +.|++|++.|.|+++.+.+.+.|.... .+..+.+ +++|.|+++
T Consensus 3 ~I~iiG~G~mG~~~a~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~~---~~~~~~~-----~~advvi~~ 64 (287)
T 3pdu_A 3 TYGFLGLGIMGGPMAANLV----------RAGFDVTVWNRNPAKCAPLVALGARQA---SSPAEVC-----AACDITIAM 64 (287)
T ss_dssp CEEEECCSTTHHHHHHHHH----------HHTCCEEEECSSGGGGHHHHHHTCEEC---SCHHHHH-----HHCSEEEEC
T ss_pred eEEEEccCHHHHHHHHHHH----------HCCCeEEEEcCCHHHHHHHHHCCCeec---CCHHHHH-----HcCCEEEEE
Confidence 6889999999999999998 789999999999999999888775431 1223333 357999999
Q ss_pred eCCHHHHHHHH---HHHHH-hCCCCcEEEEecC--hhh----HHHHHHCCCCeEEcC
Q 003861 613 YTDKKRTIEAV---QRLRL-AFPAIPIYARAQD--MMH----LLDLKKAGATDAILE 659 (791)
Q Consensus 613 ~~~d~~n~~~~---~~ar~-l~p~~~iiara~~--~~~----~~~L~~~Gad~Vi~p 659 (791)
++++...-.+. ..+.+ +.++ .+++-..+ +.. .+.+++.|+..+-.|
T Consensus 65 v~~~~~~~~v~~~~~~l~~~l~~g-~~vv~~st~~~~~~~~~~~~~~~~g~~~~~~p 120 (287)
T 3pdu_A 65 LADPAAAREVCFGANGVLEGIGGG-RGYIDMSTVDDETSTAIGAAVTARGGRFLEAP 120 (287)
T ss_dssp CSSHHHHHHHHHSTTCGGGTCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECC
T ss_pred cCCHHHHHHHHcCchhhhhcccCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEECC
Confidence 99864333322 11222 3344 44444333 222 234556677655433
No 56
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=96.38 E-value=0.0034 Score=63.82 Aligned_cols=74 Identities=23% Similarity=0.288 Sum_probs=62.1
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCC-CcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g-~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
++++|.| .|.+|+.+++.|. +.| ++|++++.+++..+.+...+..++.+|.+|++.++++ ++++|++
T Consensus 24 k~vlVtGatG~iG~~l~~~L~----------~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~~~~D~v 92 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLA----------DKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNHAALKQA-MQGQDIV 92 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHT----------TCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCHHHHHHH-HTTCSEE
T ss_pred cEEEEEeCCcHHHHHHHHHHH----------hCCCceEEEEEcChhhhcccccCCcEEEEecCCCHHHHHHH-hcCCCEE
Confidence 4688898 5999999999998 788 8999999999887666566788999999999998875 4578988
Q ss_pred EEEeCCH
Q 003861 610 MIMYTDK 616 (791)
Q Consensus 610 iv~~~~d 616 (791)
|.+.+.+
T Consensus 93 v~~a~~~ 99 (236)
T 3qvo_A 93 YANLTGE 99 (236)
T ss_dssp EEECCST
T ss_pred EEcCCCC
Confidence 8776653
No 57
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=96.38 E-value=0.012 Score=59.57 Aligned_cols=71 Identities=24% Similarity=0.225 Sum_probs=59.6
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCC-CEEEccCCCHHHHHhcCCCCCcE
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGF-PILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~-~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
.++++|.|. |.+|+.+++.|. ++|++|++++.+++..+.+.+.+. .++.+|.+ +++.+. ++++|+
T Consensus 21 ~~~ilVtGatG~iG~~l~~~L~----------~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~Dl~-~~~~~~--~~~~D~ 87 (236)
T 3e8x_A 21 GMRVLVVGANGKVARYLLSELK----------NKGHEPVAMVRNEEQGPELRERGASDIVVANLE-EDFSHA--FASIDA 87 (236)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHTTCSEEEECCTT-SCCGGG--GTTCSE
T ss_pred CCeEEEECCCChHHHHHHHHHH----------hCCCeEEEEECChHHHHHHHhCCCceEEEcccH-HHHHHH--HcCCCE
Confidence 346889998 999999999998 789999999999999988888889 99999999 333333 348998
Q ss_pred EEEEeC
Q 003861 609 VMIMYT 614 (791)
Q Consensus 609 viv~~~ 614 (791)
+|-+.+
T Consensus 88 vi~~ag 93 (236)
T 3e8x_A 88 VVFAAG 93 (236)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 887765
No 58
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=96.35 E-value=0.013 Score=61.63 Aligned_cols=88 Identities=19% Similarity=0.252 Sum_probs=67.9
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCCh-------hhHHH---HHhcCCCEEEccCCCHHHHHh
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP-------SVVKE---SRKLGFPILYGDASRPAVLLS 600 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~-------~~v~~---~~~~~~~~v~GD~t~~~~L~~ 600 (791)
++++|.|. |.+|+.+++.|. +.|++|++++.++ ++.+. +.+.+..++.+|.+|++.+++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~ 72 (307)
T 2gas_A 3 NKILILGPTGAIGRHIVWASI----------KAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVK 72 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHH----------HHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHH
T ss_pred cEEEEECCCchHHHHHHHHHH----------hCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHH
Confidence 36899997 999999999998 7899999999986 54433 345789999999999999987
Q ss_pred cCCCCCcEEEEEeCCH--HHHHHHHHHHHHhC
Q 003861 601 AGITSPKAVMIMYTDK--KRTIEAVQRLRLAF 630 (791)
Q Consensus 601 agi~~a~~viv~~~~d--~~n~~~~~~ar~l~ 630 (791)
+ ++++|+||.+.+.. .....++..+++.+
T Consensus 73 ~-~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 103 (307)
T 2gas_A 73 A-IKQVDIVICAAGRLLIEDQVKIIKAIKEAG 103 (307)
T ss_dssp H-HTTCSEEEECSSSSCGGGHHHHHHHHHHHC
T ss_pred H-HhCCCEEEECCcccccccHHHHHHHHHhcC
Confidence 6 45789888877642 33344556677765
No 59
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=96.35 E-value=0.0082 Score=63.08 Aligned_cols=88 Identities=15% Similarity=0.251 Sum_probs=67.4
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCC------hhhHH---HHHhcCCCEEEccCCCHHHHHhc
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLN------PSVVK---ESRKLGFPILYGDASRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d------~~~v~---~~~~~~~~~v~GD~t~~~~L~~a 601 (791)
++++|.|. |.+|+.+++.|. +.|++|++++.+ +++.+ .+...+..++.+|.+|++.|+++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~----------~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~ 74 (308)
T 1qyc_A 5 SRILLIGATGYIGRHVAKASL----------DLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEA 74 (308)
T ss_dssp CCEEEESTTSTTHHHHHHHHH----------HTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHH
T ss_pred CEEEEEcCCcHHHHHHHHHHH----------hCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHH
Confidence 46999997 999999999998 789999999987 34433 33457899999999999999876
Q ss_pred CCCCCcEEEEEeCCH--HHHHHHHHHHHHhC
Q 003861 602 GITSPKAVMIMYTDK--KRTIEAVQRLRLAF 630 (791)
Q Consensus 602 gi~~a~~viv~~~~d--~~n~~~~~~ar~l~ 630 (791)
++++|+||.+.+.. .....++..+++.+
T Consensus 75 -~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 104 (308)
T 1qyc_A 75 -VKNVDVVISTVGSLQIESQVNIIKAIKEVG 104 (308)
T ss_dssp -HHTCSEEEECCCGGGSGGGHHHHHHHHHHC
T ss_pred -HcCCCEEEECCcchhhhhHHHHHHHHHhcC
Confidence 45689888877643 23344556677765
No 60
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.34 E-value=0.0049 Score=63.69 Aligned_cols=88 Identities=18% Similarity=0.191 Sum_probs=65.9
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCCh-------------------hhHHHHH----h--cC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNP-------------------SVVKESR----K--LG 584 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~-------------------~~v~~~~----~--~~ 584 (791)
..+|+|+|.|.+|..+++.|. ..|. +++++|.|. .+++.+. + .+
T Consensus 31 ~~~VlVvG~Gg~G~~va~~La----------~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 100 (249)
T 1jw9_B 31 DSRVLIVGLGGLGCAASQYLA----------SAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPH 100 (249)
T ss_dssp HCEEEEECCSHHHHHHHHHHH----------HHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred CCeEEEEeeCHHHHHHHHHHH----------HcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCC
Confidence 458999999999999999998 7887 899999998 5655443 2 23
Q ss_pred CC--EEEccCCCHHHHHhcCCCCCcEEEEEeCCHHHHHHHHHHHHHhC
Q 003861 585 FP--ILYGDASRPAVLLSAGITSPKAVMIMYTDKKRTIEAVQRLRLAF 630 (791)
Q Consensus 585 ~~--~v~GD~t~~~~L~~agi~~a~~viv~~~~d~~n~~~~~~ar~l~ 630 (791)
.. .+..+.++ +.+++. ++++|.||.++++.+.+..+...+++.+
T Consensus 101 ~~v~~~~~~~~~-~~~~~~-~~~~DvVi~~~d~~~~~~~l~~~~~~~~ 146 (249)
T 1jw9_B 101 IAITPVNALLDD-AELAAL-IAEHDLVLDCTDNVAVRNQLNAGCFAAK 146 (249)
T ss_dssp SEEEEECSCCCH-HHHHHH-HHTSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred cEEEEEeccCCH-hHHHHH-HhCCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence 33 33444543 333333 5689999999999888888888888875
No 61
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=96.34 E-value=0.0071 Score=60.41 Aligned_cols=70 Identities=20% Similarity=0.226 Sum_probs=59.1
Q ss_pred CEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCC-HHHHHhcCCCCCcEEE
Q 003861 533 PVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASR-PAVLLSAGITSPKAVM 610 (791)
Q Consensus 533 ~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~-~~~L~~agi~~a~~vi 610 (791)
+++|.| .|.+|+.+++.|. +.|++|++++.+++..+.. .+..++.+|.+| ++.++++ ++++|+||
T Consensus 2 ~ilItGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~--~~~~~~~~D~~d~~~~~~~~-~~~~d~vi 68 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLS----------TTDYQIYAGARKVEQVPQY--NNVKAVHFDVDWTPEEMAKQ-LHGMDAII 68 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHT----------TSSCEEEEEESSGGGSCCC--TTEEEEECCTTSCHHHHHTT-TTTCSEEE
T ss_pred eEEEECCCCHHHHHHHHHHH----------HCCCEEEEEECCccchhhc--CCceEEEecccCCHHHHHHH-HcCCCEEE
Confidence 478888 6999999999998 8899999999999875433 578899999999 9888865 56899998
Q ss_pred EEeCC
Q 003861 611 IMYTD 615 (791)
Q Consensus 611 v~~~~ 615 (791)
-+.+.
T Consensus 69 ~~ag~ 73 (219)
T 3dqp_A 69 NVSGS 73 (219)
T ss_dssp ECCCC
T ss_pred ECCcC
Confidence 87764
No 62
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=96.25 E-value=0.014 Score=61.80 Aligned_cols=88 Identities=18% Similarity=0.275 Sum_probs=67.1
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCCh------hhHHH---HHhcCCCEEEccCCCHHHHHhc
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP------SVVKE---SRKLGFPILYGDASRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~------~~v~~---~~~~~~~~v~GD~t~~~~L~~a 601 (791)
.+++|.|. |.+|+.+++.|. +.|++|++++.++ ++.+. +...+..++.+|.+|++.++++
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a 74 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASL----------SFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSV 74 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHH----------HTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH
T ss_pred cEEEEEcCCchhHHHHHHHHH----------hCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHH
Confidence 46899996 999999999998 7899999999986 33332 3456899999999999999876
Q ss_pred CCCCCcEEEEEeCCH--HHHHHHHHHHHHhC
Q 003861 602 GITSPKAVMIMYTDK--KRTIEAVQRLRLAF 630 (791)
Q Consensus 602 gi~~a~~viv~~~~d--~~n~~~~~~ar~l~ 630 (791)
++.+|+|+.+.+.. .....++..+++.+
T Consensus 75 -~~~~d~vi~~a~~~~~~~~~~l~~aa~~~g 104 (321)
T 3c1o_A 75 -LKQVDIVISALPFPMISSQIHIINAIKAAG 104 (321)
T ss_dssp -HTTCSEEEECCCGGGSGGGHHHHHHHHHHC
T ss_pred -HcCCCEEEECCCccchhhHHHHHHHHHHhC
Confidence 45689888877642 23344556666665
No 63
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=96.25 E-value=0.024 Score=59.86 Aligned_cols=112 Identities=11% Similarity=0.094 Sum_probs=75.4
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++.|+|+|++|+.+++.|. ..|.+|++.|.++++.+.+.+.|..++. .+.++++ ++++|.++
T Consensus 155 g~~v~IiG~G~iG~~~a~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~~~-----~~~l~~~-l~~aDvVi 218 (293)
T 3d4o_A 155 GANVAVLGLGRVGMSVARKFA----------ALGAKVKVGARESDLLARIAEMGMEPFH-----ISKAAQE-LRDVDVCI 218 (293)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHTTSEEEE-----GGGHHHH-TTTCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------hCCCEEEEEECCHHHHHHHHHCCCeecC-----hhhHHHH-hcCCCEEE
Confidence 357999999999999999998 7899999999999887777666655431 1223332 46899999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEEecC--hhhHHHHHHCCCCeEEcCcH
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQD--MMHLLDLKKAGATDAILENA 661 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiara~~--~~~~~~L~~~Gad~Vi~p~~ 661 (791)
.+++....|- ...+.+.|+..++--++. ....+..++.|+..+..|..
T Consensus 219 ~~~p~~~i~~---~~l~~mk~~~~lin~ar~~~~~~~~~a~~~Gv~~~~~~~l 268 (293)
T 3d4o_A 219 NTIPALVVTA---NVLAEMPSHTFVIDLASKPGGTDFRYAEKRGIKALLVPGL 268 (293)
T ss_dssp ECCSSCCBCH---HHHHHSCTTCEEEECSSTTCSBCHHHHHHHTCEEEECCCH
T ss_pred ECCChHHhCH---HHHHhcCCCCEEEEecCCCCCCCHHHHHHCCCEEEECCCC
Confidence 9987632222 234455565444444432 22236677789876656654
No 64
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=96.25 E-value=0.019 Score=62.50 Aligned_cols=107 Identities=20% Similarity=0.272 Sum_probs=72.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCC-HHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASR-PAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~-~~~L~~agi~~a~~vi 610 (791)
.++.|+|+|.+|..+++.|. +.|++|++.|.++++++.+.+.|... .++ .+..+++ +++|.|+
T Consensus 23 mkIgiIGlG~mG~~~A~~L~----------~~G~~V~v~dr~~~~~~~l~~~g~~~----~~s~~e~~~~a--~~~DvVi 86 (358)
T 4e21_A 23 MQIGMIGLGRMGADMVRRLR----------KGGHECVVYDLNVNAVQALEREGIAG----ARSIEEFCAKL--VKPRVVW 86 (358)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHTTTCBC----CSSHHHHHHHS--CSSCEEE
T ss_pred CEEEEECchHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHHCCCEE----eCCHHHHHhcC--CCCCEEE
Confidence 47999999999999999998 88999999999999999998876542 233 3344433 4569999
Q ss_pred EEeCCHHHHHHHHHHHHH-hCCCCcEEEEecC------hhhHHHHHHCCCCeE
Q 003861 611 IMYTDKKRTIEAVQRLRL-AFPAIPIYARAQD------MMHLLDLKKAGATDA 656 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~-l~p~~~iiara~~------~~~~~~L~~~Gad~V 656 (791)
++++++ ....+...+.. +.++ .+++-..+ .+..+.+++.|+..+
T Consensus 87 ~~vp~~-~v~~vl~~l~~~l~~g-~iiId~st~~~~~~~~~~~~l~~~g~~~v 137 (358)
T 4e21_A 87 LMVPAA-VVDSMLQRMTPLLAAN-DIVIDGGNSHYQDDIRRADQMRAQGITYV 137 (358)
T ss_dssp ECSCGG-GHHHHHHHHGGGCCTT-CEEEECSSCCHHHHHHHHHHHHTTTCEEE
T ss_pred EeCCHH-HHHHHHHHHHhhCCCC-CEEEeCCCCChHHHHHHHHHHHHCCCEEE
Confidence 999887 32223333333 3344 45554433 223345566677654
No 65
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=96.24 E-value=0.017 Score=60.67 Aligned_cols=68 Identities=24% Similarity=0.389 Sum_probs=54.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCH-HHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~-~~L~~agi~~a~~vi 610 (791)
.++.|+|+|.+|..+++.|. +.|++|.++|.++++.+.+.+.|... .++. +.+ +++|.|+
T Consensus 6 m~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~~-----~~~D~vi 66 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNLL----------KAGYSLVVSDRNPEAIADVIAAGAET----ASTAKAIA-----EQCDVII 66 (299)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEE----CSSHHHHH-----HHCSEEE
T ss_pred ceEEEECchHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHHCCCee----cCCHHHHH-----hCCCEEE
Confidence 36999999999999999998 78999999999999999888776532 2333 333 3589999
Q ss_pred EEeCCHHH
Q 003861 611 IMYTDKKR 618 (791)
Q Consensus 611 v~~~~d~~ 618 (791)
++++++..
T Consensus 67 ~~v~~~~~ 74 (299)
T 1vpd_A 67 TMLPNSPH 74 (299)
T ss_dssp ECCSSHHH
T ss_pred EECCCHHH
Confidence 99987643
No 66
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=96.23 E-value=0.01 Score=59.27 Aligned_cols=89 Identities=17% Similarity=0.223 Sum_probs=67.1
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh-hHHHH--HhcCCCEEEccCCCHHHHHhcCCCCCc
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVKES--RKLGFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~-~v~~~--~~~~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
++++|.| .|.+|+.+++.|.+ +.|++|++++.+++ +.+.+ ...+..++.+|.+|++.++++ ++++|
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~---------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d 75 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLT---------YTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQNPGXLEQA-VTNAE 75 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHH---------HCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTCHHHHHHH-HTTCS
T ss_pred EEEEEEeCCcHHHHHHHHHHHh---------cCCceEEEEecCccccchhhccCCCceEEEECCCCCHHHHHHH-HcCCC
Confidence 4589999 59999999999962 48999999999999 77766 456788999999999998875 35789
Q ss_pred EEEEEeCCH-HHHHHHHHHHHHhC
Q 003861 608 AVMIMYTDK-KRTIEAVQRLRLAF 630 (791)
Q Consensus 608 ~viv~~~~d-~~n~~~~~~ar~l~ 630 (791)
++|.+.+.. .....++..+++.+
T Consensus 76 ~vv~~ag~~n~~~~~~~~~~~~~~ 99 (221)
T 3r6d_A 76 VVFVGAMESGSDMASIVKALSRXN 99 (221)
T ss_dssp EEEESCCCCHHHHHHHHHHHHHTT
T ss_pred EEEEcCCCCChhHHHHHHHHHhcC
Confidence 998877652 11233344445544
No 67
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=96.20 E-value=0.01 Score=65.72 Aligned_cols=114 Identities=16% Similarity=0.128 Sum_probs=81.6
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCC---CcEEEEcCChhhHHHHHhc-------CCCEEEccCCCHHHHHhcC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVG---WPFVAFDLNPSVVKESRKL-------GFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g---~~vvvID~d~~~v~~~~~~-------~~~~v~GD~t~~~~L~~ag 602 (791)
+++|+|.|.+|+.+++.|. +.| .+|++.|.|+++.+++.+. ....+..|.+|++.++++
T Consensus 3 kVlIiGaGgiG~~ia~~L~----------~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~- 71 (405)
T 4ina_A 3 KVLQIGAGGVGGVVAHKMA----------MNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVAL- 71 (405)
T ss_dssp EEEEECCSHHHHHHHHHHH----------TCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHH-
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHH-
Confidence 6899999999999999998 666 3899999999998776532 478889999998887765
Q ss_pred CC--CCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEE--ecCh-----------hhHHHHHHCCCCeEEcCc
Q 003861 603 IT--SPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR--AQDM-----------MHLLDLKKAGATDAILEN 660 (791)
Q Consensus 603 i~--~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiar--a~~~-----------~~~~~L~~~Gad~Vi~p~ 660 (791)
++ ++|.||.+++.. .+..++..+.+.+ .+++-. ...+ +..+..++.|+..+....
T Consensus 72 l~~~~~DvVin~ag~~-~~~~v~~a~l~~g--~~vvD~a~~~~~~~~~~~~~~~~~l~~~a~~aG~~~i~g~G 141 (405)
T 4ina_A 72 INEVKPQIVLNIALPY-QDLTIMEACLRTG--VPYLDTANYEHPDLAKFEYKEQWAFHDRYKEKGVMALLGSG 141 (405)
T ss_dssp HHHHCCSEEEECSCGG-GHHHHHHHHHHHT--CCEEESSCCBCTTCSCBCSHHHHTTHHHHHHHTCEEEECCB
T ss_pred HHhhCCCEEEECCCcc-cChHHHHHHHHhC--CCEEEecCCCCcccchhhhHHHHHHHHHHHHhCCEEEEcCC
Confidence 22 489888887653 3455566666665 344422 1111 456677888887665544
No 68
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=96.20 E-value=0.014 Score=62.61 Aligned_cols=88 Identities=19% Similarity=0.174 Sum_probs=69.9
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCCh----hhHH---HHHhcCCCEEEccCCCHHHHHhcCC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP----SVVK---ESRKLGFPILYGDASRPAVLLSAGI 603 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~----~~v~---~~~~~~~~~v~GD~t~~~~L~~agi 603 (791)
.+++|.|. |.+|+.+++.|. +.|++|++++.++ ++.+ .+.+.+..++.||.+|++.++++ +
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~----------~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~-~ 79 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASL----------DAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKI-L 79 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHH----------HTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHH-H
T ss_pred CeEEEECCCcHHHHHHHHHHH----------HCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHH-H
Confidence 57999998 999999999998 7899999999876 4443 44567899999999999988875 3
Q ss_pred C--CCcEEEEEeCC--HHHHHHHHHHHHHhC
Q 003861 604 T--SPKAVMIMYTD--KKRTIEAVQRLRLAF 630 (791)
Q Consensus 604 ~--~a~~viv~~~~--d~~n~~~~~~ar~l~ 630 (791)
+ ++|+||.+.+. -.....++..+++.+
T Consensus 80 ~~~~~d~Vi~~a~~~n~~~~~~l~~aa~~~g 110 (346)
T 3i6i_A 80 KEHEIDIVVSTVGGESILDQIALVKAMKAVG 110 (346)
T ss_dssp HHTTCCEEEECCCGGGGGGHHHHHHHHHHHC
T ss_pred hhCCCCEEEECCchhhHHHHHHHHHHHHHcC
Confidence 4 78988887764 244556667777776
No 69
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=96.19 E-value=0.0046 Score=67.48 Aligned_cols=106 Identities=17% Similarity=0.103 Sum_probs=73.2
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
.++++|+|+|++|+.+++.|. +.|.+|++.|.|+++++++.+. +...+. .++.+. .++|.+
T Consensus 173 GktV~V~G~G~VG~~~A~~L~----------~~GakVvv~D~~~~~l~~~a~~~ga~~v~----~~~ll~----~~~DIv 234 (364)
T 1leh_A 173 GLAVSVQGLGNVAKALCKKLN----------TEGAKLVVTDVNKAAVSAAVAEEGADAVA----PNAIYG----VTCDIF 234 (364)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHHCCEECC----GGGTTT----CCCSEE
T ss_pred cCEEEEECchHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHcCCEEEC----hHHHhc----cCCcEe
Confidence 357999999999999999998 8999999999999998876553 433221 122332 588988
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEE-EecC----hhhHHHHHHCCCCeEEcCcH
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYA-RAQD----MMHLLDLKKAGATDAILENA 661 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iia-ra~~----~~~~~~L~~~Gad~Vi~p~~ 661 (791)
+.+...+..|.. .++.+. .++|+ .++. ++..+.|++.|+ ++.|..
T Consensus 235 ip~a~~~~I~~~---~~~~lg--~~iV~e~An~p~t~~ea~~~L~~~Gi--~~~Pd~ 284 (364)
T 1leh_A 235 APCALGAVLNDF---TIPQLK--AKVIAGSADNQLKDPRHGKYLHELGI--VYAPDY 284 (364)
T ss_dssp EECSCSCCBSTT---HHHHCC--CSEECCSCSCCBSSHHHHHHHHHHTC--EECCHH
T ss_pred eccchHHHhCHH---HHHhCC--CcEEEeCCCCCcccHHHHHHHHhCCC--EEecce
Confidence 776544333322 344553 45555 4554 366788999998 667774
No 70
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=96.17 E-value=0.015 Score=62.21 Aligned_cols=92 Identities=24% Similarity=0.308 Sum_probs=64.2
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHHHHHhcCCC-EEEccCCCHHHHHhcCCCCCc
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKESRKLGFP-ILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~~~~~~~~~-~v~GD~t~~~~L~~agi~~a~ 607 (791)
..++.|+|+|.+|..+++.|. +.|+ +|++.|.+++..+.+.+.|.. ....|. + +.-++++|
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~----------~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~---~---~~~~~~aD 96 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLR----------RSGFKGKIYGYDINPESISKAVDLGIIDEGTTSI---A---KVEDFSPD 96 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHH----------HTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCT---T---GGGGGCCS
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------hCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCH---H---HHhhccCC
Confidence 357999999999999999998 7888 999999999999998887753 122222 1 10246899
Q ss_pred EEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEec
Q 003861 608 AVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQ 640 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~ 640 (791)
.||++++.+... .+...+.. +.|+ .+++-+.
T Consensus 97 vVilavp~~~~~-~vl~~l~~~l~~~-~iv~d~~ 128 (314)
T 3ggo_A 97 FVMLSSPVRTFR-EIAKKLSYILSED-ATVTDQG 128 (314)
T ss_dssp EEEECSCGGGHH-HHHHHHHHHSCTT-CEEEECC
T ss_pred EEEEeCCHHHHH-HHHHHHhhccCCC-cEEEECC
Confidence 999999876432 23333333 4555 4555443
No 71
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=96.15 E-value=0.013 Score=60.63 Aligned_cols=88 Identities=15% Similarity=0.170 Sum_probs=61.5
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCc-EEEEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWP-FVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~-vvvID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
++.|+|+|++|+.+++.|. +.|++ |.++|.++++.+++.+. +..+ .. +. ++ -++++|.|+
T Consensus 12 ~i~iiG~G~mG~~~a~~l~----------~~g~~~v~~~~~~~~~~~~~~~~~g~~~-~~---~~---~~-~~~~~Dvvi 73 (266)
T 3d1l_A 12 PIVLIGAGNLATNLAKALY----------RKGFRIVQVYSRTEESARELAQKVEAEY-TT---DL---AE-VNPYAKLYI 73 (266)
T ss_dssp CEEEECCSHHHHHHHHHHH----------HHTCCEEEEECSSHHHHHHHHHHTTCEE-ES---CG---GG-SCSCCSEEE
T ss_pred eEEEEcCCHHHHHHHHHHH----------HCCCeEEEEEeCCHHHHHHHHHHcCCce-eC---CH---HH-HhcCCCEEE
Confidence 6999999999999999998 67888 89999999999888765 5443 22 22 22 246899999
Q ss_pred EEeCCHHHHHHHHHHHHHhC-CCCcEEEEec
Q 003861 611 IMYTDKKRTIEAVQRLRLAF-PAIPIYARAQ 640 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~-p~~~iiara~ 640 (791)
++++++.. ..+...+++.. ++ .+++...
T Consensus 74 ~av~~~~~-~~v~~~l~~~~~~~-~ivv~~s 102 (266)
T 3d1l_A 74 VSLKDSAF-AELLQGIVEGKREE-ALMVHTA 102 (266)
T ss_dssp ECCCHHHH-HHHHHHHHTTCCTT-CEEEECC
T ss_pred EecCHHHH-HHHHHHHHhhcCCC-cEEEECC
Confidence 99988743 33333344332 44 4555443
No 72
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=96.14 E-value=0.03 Score=60.61 Aligned_cols=89 Identities=15% Similarity=0.175 Sum_probs=66.1
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhH--HHHHh-cCCCEEEcc-CCCHHHHHhcCCCC
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV--KESRK-LGFPILYGD-ASRPAVLLSAGITS 605 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v--~~~~~-~~~~~v~GD-~t~~~~L~~agi~~ 605 (791)
.++++|.|. |.+|+.+++.|. +.|++|++++.+++.. +.+.+ .+..++.|| .+|++.++++ ++.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~l~~~~~v~~v~~D~l~d~~~l~~~-~~~ 73 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAA----------AVGHHVRAQVHSLKGLIAEELQAIPNVTLFQGPLLNNVPLMDTL-FEG 73 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHH----------HTTCCEEEEESCSCSHHHHHHHTSTTEEEEESCCTTCHHHHHHH-HTT
T ss_pred CCEEEEECCCCHHHHHHHHHHH----------hCCCEEEEEECCCChhhHHHHhhcCCcEEEECCccCCHHHHHHH-Hhc
Confidence 457899985 999999999998 7899999999988765 44443 367889999 9999999876 567
Q ss_pred CcEEEEEeCCH--HHH---HHHHHHHHHhC
Q 003861 606 PKAVMIMYTDK--KRT---IEAVQRLRLAF 630 (791)
Q Consensus 606 a~~viv~~~~d--~~n---~~~~~~ar~l~ 630 (791)
+|+|+...... ..| ..++..+++.+
T Consensus 74 ~d~Vi~~a~~~~~~~~~~~~~l~~aa~~~g 103 (352)
T 1xgk_A 74 AHLAFINTTSQAGDEIAIGKDLADAAKRAG 103 (352)
T ss_dssp CSEEEECCCSTTSCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEcCCCCCcHHHHHHHHHHHHHHHcC
Confidence 89888665431 223 33445566665
No 73
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=96.08 E-value=0.025 Score=64.06 Aligned_cols=114 Identities=17% Similarity=0.199 Sum_probs=74.5
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCC---CEEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGF---PILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~---~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
.++.|+|+|.+|..+++.|. +.|++|++.|.++++++.+.+.+. .+ .+-.+-++..+ .++++|.
T Consensus 5 ~kIgiIGlG~MG~~lA~~L~----------~~G~~V~v~dr~~~~~~~l~~~g~~g~~i-~~~~s~~e~v~--~l~~aDv 71 (484)
T 4gwg_A 5 ADIALIGLAVMGQNLILNMN----------DHGFVVCAFNRTVSKVDDFLANEAKGTKV-VGAQSLKEMVS--KLKKPRR 71 (484)
T ss_dssp BSEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSTHHHHHHHHTTTTTSSC-EECSSHHHHHH--TBCSSCE
T ss_pred CEEEEEChhHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHhcccCCCce-eccCCHHHHHh--hccCCCE
Confidence 47999999999999999998 889999999999999999876532 22 11122233333 3568999
Q ss_pred EEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEecCh------hhHHHHHHCCCCeEEcC
Q 003861 609 VMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDM------MHLLDLKKAGATDAILE 659 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~~~------~~~~~L~~~Gad~Vi~p 659 (791)
|+++++++...-.+...+.. +.|+ .+++-..+. +..+.+++.|+..+=.|
T Consensus 72 Vil~Vp~~~~v~~vl~~l~~~L~~g-~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~p 128 (484)
T 4gwg_A 72 IILLVKAGQAVDDFIEKLVPLLDTG-DIIIDGGNSEYRDTTRRCRDLKAKGILFVGSG 128 (484)
T ss_dssp EEECSCSSHHHHHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEecCChHHHHHHHHHHHHhcCCC-CEEEEcCCCCchHHHHHHHHHHhhccccccCC
Confidence 99999885332223333333 3344 455544432 23345667788665444
No 74
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=96.08 E-value=0.035 Score=63.10 Aligned_cols=116 Identities=18% Similarity=0.168 Sum_probs=74.2
Q ss_pred cCCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-cC--CCEEEccCCCHH-HHHhcCCC
Q 003861 529 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LG--FPILYGDASRPA-VLLSAGIT 604 (791)
Q Consensus 529 ~~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-~~--~~~v~GD~t~~~-~L~~agi~ 604 (791)
.+..++.|+|.|.+|..+++.|. +.|++|++.|.++++++++.+ .. ..+ .. .++++ ..+ +++
T Consensus 8 ~~~~~IgvIGlG~MG~~lA~~La----------~~G~~V~v~dr~~~~~~~l~~~~~~~~gi-~~-~~s~~e~v~--~l~ 73 (497)
T 2p4q_A 8 HMSADFGLIGLAVMGQNLILNAA----------DHGFTVCAYNRTQSKVDHFLANEAKGKSI-IG-ATSIEDFIS--KLK 73 (497)
T ss_dssp -CCCSEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSSHHHHHHHHTTTTTSSE-EC-CSSHHHHHH--TSC
T ss_pred cCCCCEEEEeeHHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHcccccCCCe-EE-eCCHHHHHh--cCC
Confidence 46778999999999999999998 789999999999999998876 21 112 21 23333 222 456
Q ss_pred CCcEEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEecChh------hHHHHHHCCCCeEEcC
Q 003861 605 SPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMM------HLLDLKKAGATDAILE 659 (791)
Q Consensus 605 ~a~~viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~~~~------~~~~L~~~Gad~Vi~p 659 (791)
++|.|+++++++...-.++..+.. +.|+ .+++-..+-. -.+.+++.|+..+-.|
T Consensus 74 ~aDvVil~Vp~~~~v~~vl~~l~~~l~~g-~iIId~s~~~~~~~~~l~~~l~~~g~~~v~~p 134 (497)
T 2p4q_A 74 RPRKVMLLVKAGAPVDALINQIVPLLEKG-DIIIDGGNSHFPDSNRRYEELKKKGILFVGSG 134 (497)
T ss_dssp SSCEEEECCCSSHHHHHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEcCChHHHHHHHHHHHHhCCCC-CEEEECCCCChhHHHHHHHHHHHcCCceeCCC
Confidence 799999999885433333333333 3344 4555443321 2334556677655343
No 75
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.02 E-value=0.022 Score=60.57 Aligned_cols=132 Identities=16% Similarity=0.129 Sum_probs=79.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHH--HHH-hcCCC-----EEEccCCCHHHHHhc
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVK--ESR-KLGFP-----ILYGDASRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~--~~~-~~~~~-----~v~GD~t~~~~L~~a 601 (791)
.++.|+|.|.+|..++..|. ..|+ +|+++|.++++.+ ... +.+.. -+... ++.+
T Consensus 8 mkI~IiGaG~vG~~~a~~l~----------~~g~~~~V~l~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~----- 71 (319)
T 1lld_A 8 TKLAVIGAGAVGSTLAFAAA----------QRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGS-DDPE----- 71 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEE-SCGG-----
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEeCChhHHHHHHHHHHhhhhhcCCeEEEeC-CCHH-----
Confidence 47999999999999999998 6788 9999999998765 221 22221 11111 1322
Q ss_pred CCCCCcEEEEEeCCH-----------HHHH----HHHHHHHHhCCCCcEEEEecChhhHHHHH----HCCCCeEEcC-cH
Q 003861 602 GITSPKAVMIMYTDK-----------KRTI----EAVQRLRLAFPAIPIYARAQDMMHLLDLK----KAGATDAILE-NA 661 (791)
Q Consensus 602 gi~~a~~viv~~~~d-----------~~n~----~~~~~ar~l~p~~~iiara~~~~~~~~L~----~~Gad~Vi~p-~~ 661 (791)
.++++|.|+++++.. ..|. .++..+++..|+..++.-.|-......+. ..+.++|+.. ..
T Consensus 72 ~~~~aD~Vii~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~~~~~~~~~~~~~~~~~~vig~~~~ 151 (319)
T 1lld_A 72 ICRDADMVVITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPVDIATHVAQKLTGLPENQIFGSGTN 151 (319)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSHHHHHHHHHHHHTCCTTSEEECTTH
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCchHHHHHHHHHhcCCCHHHEeecccc
Confidence 356899999998432 1233 34555555667755554444334433333 3566788865 44
Q ss_pred HHHHHHHHHHHhhcCCCh
Q 003861 662 ETSLQLGSKLLKGFGVMS 679 (791)
Q Consensus 662 ~~~~~la~~~l~~l~~~~ 679 (791)
..+.++...+...+++++
T Consensus 152 l~~~r~~~~~a~~~~v~~ 169 (319)
T 1lld_A 152 LDSARLRFLIAQQTGVNV 169 (319)
T ss_dssp HHHHHHHHHHHHHHTCCG
T ss_pred HhHHHHHHHHHHHhCCCH
Confidence 444455554444445554
No 76
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=96.00 E-value=0.014 Score=60.90 Aligned_cols=86 Identities=26% Similarity=0.337 Sum_probs=60.4
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHHHHHhcCCCE-EEccCCCH-HHHHhcCCC-CCc
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKESRKLGFPI-LYGDASRP-AVLLSAGIT-SPK 607 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~~~~~~~~~~-v~GD~t~~-~~L~~agi~-~a~ 607 (791)
++.|+|+|.+|..+++.|. +.|+ +|+++|.++++.+.+++.|... .. ++. +. ++ ++|
T Consensus 3 ~I~iIG~G~mG~~~a~~l~----------~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~---~~~~~~-----~~~~aD 64 (281)
T 2g5c_A 3 NVLIVGVGFMGGSFAKSLR----------RSGFKGKIYGYDINPESISKAVDLGIIDEGT---TSIAKV-----EDFSPD 64 (281)
T ss_dssp EEEEESCSHHHHHHHHHHH----------HTTCCSEEEEECSCHHHHHHHHHTTSCSEEE---SCGGGG-----GGTCCS
T ss_pred EEEEEecCHHHHHHHHHHH----------hcCCCcEEEEEeCCHHHHHHHHHCCCccccc---CCHHHH-----hcCCCC
Confidence 5889999999999999998 7787 8999999999998888777541 12 222 22 34 899
Q ss_pred EEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEE
Q 003861 608 AVMIMYTDKKRTIEAVQRLRL-AFPAIPIYAR 638 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~-l~p~~~iiar 638 (791)
.|+++++.+.. ..++..+.. +.++ .+++-
T Consensus 65 vVilavp~~~~-~~v~~~l~~~l~~~-~iv~~ 94 (281)
T 2g5c_A 65 FVMLSSPVRTF-REIAKKLSYILSED-ATVTD 94 (281)
T ss_dssp EEEECSCHHHH-HHHHHHHHHHSCTT-CEEEE
T ss_pred EEEEcCCHHHH-HHHHHHHHhhCCCC-cEEEE
Confidence 99999987633 233333333 4455 34443
No 77
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=95.99 E-value=0.016 Score=62.50 Aligned_cols=92 Identities=18% Similarity=0.276 Sum_probs=62.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEcc-----------CCCHHHHHh
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGD-----------ASRPAVLLS 600 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD-----------~t~~~~L~~ 600 (791)
.++.|+|.|.+|..++..|. +.|++|+++|.++++.+.+++.+...+.+. .++.+ +
T Consensus 5 mki~iiG~G~~G~~~a~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 71 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLA----------LKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSDIG---L 71 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESCHH---H
T ss_pred CeEEEECCCHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCCHH---H
Confidence 37999999999999999998 789999999999999998877632222221 12332 1
Q ss_pred cCCCCCcEEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEE
Q 003861 601 AGITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYAR 638 (791)
Q Consensus 601 agi~~a~~viv~~~~d~~n~~~~~~ar~-l~p~~~iiar 638 (791)
+ ++++|.|+++++++.. ..+...++. +.++..++..
T Consensus 72 ~-~~~~D~vi~~v~~~~~-~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 72 A-VKDADVILIVVPAIHH-ASIAANIASYISEGQLIILN 108 (359)
T ss_dssp H-HTTCSEEEECSCGGGH-HHHHHHHGGGCCTTCEEEES
T ss_pred H-HhcCCEEEEeCCchHH-HHHHHHHHHhCCCCCEEEEc
Confidence 1 3579999999988654 233333333 3445434444
No 78
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.96 E-value=0.0078 Score=60.30 Aligned_cols=72 Identities=19% Similarity=0.269 Sum_probs=59.8
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++|.|. |.+|+.+++.|. +.|++|++++.+++..+.+. .+..++.+|.+|++.++++ ++++|+||
T Consensus 5 ~~ilItGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~-~~~~~~~~Dl~d~~~~~~~-~~~~d~vi 72 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEAL----------NRGFEVTAVVRHPEKIKIEN-EHLKVKKADVSSLDEVCEV-CKGADAVI 72 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHH----------TTTCEEEEECSCGGGCCCCC-TTEEEECCCTTCHHHHHHH-HTTCSEEE
T ss_pred CEEEEEcCCchHHHHHHHHHH----------HCCCEEEEEEcCcccchhcc-CceEEEEecCCCHHHHHHH-hcCCCEEE
Confidence 46899995 999999999998 88999999999988754432 5688999999999998875 35789888
Q ss_pred EEeCC
Q 003861 611 IMYTD 615 (791)
Q Consensus 611 v~~~~ 615 (791)
-+.+.
T Consensus 73 ~~a~~ 77 (227)
T 3dhn_A 73 SAFNP 77 (227)
T ss_dssp ECCCC
T ss_pred EeCcC
Confidence 87654
No 79
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=95.91 E-value=0.036 Score=58.08 Aligned_cols=88 Identities=9% Similarity=0.081 Sum_probs=61.2
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC---cEEEEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhcCCCCCc
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW---PFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~---~vvvID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
.++.|+|+|.+|..+++.|. +.|+ +|++.|.|+++.+++.+. |..+. .+..+. ++++|
T Consensus 4 ~~I~iIG~G~mG~aia~~l~----------~~g~~~~~V~v~dr~~~~~~~l~~~~gi~~~---~~~~~~-----~~~aD 65 (280)
T 3tri_A 4 SNITFIGGGNMARNIVVGLI----------ANGYDPNRICVTNRSLDKLDFFKEKCGVHTT---QDNRQG-----ALNAD 65 (280)
T ss_dssp SCEEEESCSHHHHHHHHHHH----------HTTCCGGGEEEECSSSHHHHHHHHTTCCEEE---SCHHHH-----HSSCS
T ss_pred CEEEEEcccHHHHHHHHHHH----------HCCCCCCeEEEEeCCHHHHHHHHHHcCCEEe---CChHHH-----HhcCC
Confidence 46999999999999999998 7788 899999999999988874 65432 122233 35799
Q ss_pred EEEEEeCCHHHHHHHHHHHHH--hCCCCcEEEEe
Q 003861 608 AVMIMYTDKKRTIEAVQRLRL--AFPAIPIYARA 639 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~--l~p~~~iiara 639 (791)
.|++++..+. --.+...++. +.++ .+++..
T Consensus 66 vVilav~p~~-~~~vl~~l~~~~l~~~-~iiiS~ 97 (280)
T 3tri_A 66 VVVLAVKPHQ-IKMVCEELKDILSETK-ILVISL 97 (280)
T ss_dssp EEEECSCGGG-HHHHHHHHHHHHHTTT-CEEEEC
T ss_pred eEEEEeCHHH-HHHHHHHHHhhccCCC-eEEEEe
Confidence 9999986543 2233344444 4444 344443
No 80
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=95.88 E-value=0.042 Score=62.25 Aligned_cols=112 Identities=15% Similarity=0.199 Sum_probs=70.8
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcC--CCEEEccCCCH-HHHHhcCCCCC
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLG--FPILYGDASRP-AVLLSAGITSP 606 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~--~~~v~GD~t~~-~~L~~agi~~a 606 (791)
.+.++.|+|.|.+|..+++.|. +.|++|++.|.++++++.+.+.. ..+. . .+++ +..+ +++++
T Consensus 14 ~~~~IgvIGlG~MG~~lA~~La----------~~G~~V~v~~r~~~~~~~l~~~~~~~gi~-~-~~s~~e~v~--~l~~a 79 (480)
T 2zyd_A 14 SKQQIGVVGMAVMGRNLALNIE----------SRGYTVSIFNRSREKTEEVIAENPGKKLV-P-YYTVKEFVE--SLETP 79 (480)
T ss_dssp -CBSEEEECCSHHHHHHHHHHH----------TTTCCEEEECSSHHHHHHHHHHSTTSCEE-E-CSSHHHHHH--TBCSS
T ss_pred CCCeEEEEccHHHHHHHHHHHH----------hCCCeEEEEeCCHHHHHHHHhhCCCCCeE-E-eCCHHHHHh--CCCCC
Confidence 3567999999999999999998 88999999999999998887641 0121 1 2333 3332 34579
Q ss_pred cEEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEecChh------hHHHHHHCCCCeE
Q 003861 607 KAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMM------HLLDLKKAGATDA 656 (791)
Q Consensus 607 ~~viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~~~~------~~~~L~~~Gad~V 656 (791)
|.|+++++++...-.++..+.. +.|+ .+++-..+-. -.+.+++.|+..+
T Consensus 80 DvVil~Vp~~~~v~~vl~~l~~~l~~g-~iIId~s~g~~~~t~~l~~~l~~~g~~~v 135 (480)
T 2zyd_A 80 RRILLMVKAGAGTDAAIDSLKPYLDKG-DIIIDGGNTFFQDTIRRNRELSAEGFNFI 135 (480)
T ss_dssp CEEEECSCSSSHHHHHHHHHGGGCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHHHHhhcCCC-CEEEECCCCCHHHHHHHHHHHHHCCCCee
Confidence 9999999884322223333333 3344 3555443321 2344555677654
No 81
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=95.88 E-value=0.055 Score=57.47 Aligned_cols=129 Identities=16% Similarity=0.138 Sum_probs=80.2
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCC--CcEEEEcCChhhHHHHHh-cC---------CCEEEccCCCHHHHHh
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSVVKESRK-LG---------FPILYGDASRPAVLLS 600 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g--~~vvvID~d~~~v~~~~~-~~---------~~~v~GD~t~~~~L~~ 600 (791)
++.|+|.|.+|..++..|. ..| .+|+++|.|+++.+.... .+ ..+.. +|.+
T Consensus 3 kI~VIGaG~~G~~la~~L~----------~~g~~~~V~l~d~~~~~~~~~~~~l~~~~~~~~~~~~~~~---~d~~---- 65 (309)
T 1hyh_A 3 KIGIIGLGNVGAAVAHGLI----------AQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVI---NDWA---- 65 (309)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEE---SCGG----
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEcCCHHHHHHHHHHHHhhhhhcCCCeEEEe---CCHH----
Confidence 5899999999999999997 667 799999999988766542 11 12212 2322
Q ss_pred cCCCCCcEEEEEeCCHH---------------HHH----HHHHHHHHhCCCCcEEEEecChhhH--HHHHH---CCCCeE
Q 003861 601 AGITSPKAVMIMYTDKK---------------RTI----EAVQRLRLAFPAIPIYARAQDMMHL--LDLKK---AGATDA 656 (791)
Q Consensus 601 agi~~a~~viv~~~~d~---------------~n~----~~~~~ar~l~p~~~iiara~~~~~~--~~L~~---~Gad~V 656 (791)
.+++||.++++++... .|+ .++..+++..|+..++. ..|+.+. ..+++ ....+|
T Consensus 66 -~~~~aDvViiav~~~~~~~~~~g~~r~~l~~~n~~i~~~i~~~i~~~~~~~~ii~-~tNp~~~~~~~~~~~~~~~~~rv 143 (309)
T 1hyh_A 66 -ALADADVVISTLGNIKLQQDNPTGDRFAELKFTSSMVQSVGTNLKESGFHGVLVV-ISNPVDVITALFQHVTGFPAHKV 143 (309)
T ss_dssp -GGTTCSEEEECCSCGGGTC-------CTTHHHHHHHHHHHHHHHHHTTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGE
T ss_pred -HhCCCCEEEEecCCcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEE-EcCcHHHHHHHHHHhcCCCHHHE
Confidence 2478999999998754 243 34455555577765555 5655544 23444 344466
Q ss_pred EcC-cHHHHHHHHHHHHhhcCCChH
Q 003861 657 ILE-NAETSLQLGSKLLKGFGVMSD 680 (791)
Q Consensus 657 i~p-~~~~~~~la~~~l~~l~~~~~ 680 (791)
+-- ...-..++...+-+.+++++.
T Consensus 144 ig~gt~ld~~r~~~~~a~~l~~~~~ 168 (309)
T 1hyh_A 144 IGTGTLLDTARMQRAVGEAFDLDPR 168 (309)
T ss_dssp EECTTHHHHHHHHHHHHHHHTCCGG
T ss_pred eecCccchHHHHHHHHHHHhCCChh
Confidence 655 332233455455554555543
No 82
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=95.86 E-value=0.011 Score=59.60 Aligned_cols=66 Identities=21% Similarity=0.241 Sum_probs=53.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
.++.|+|+|.+|+.+++.|. +.|++|+++|.++++.+.+.+.+..+. + ++++ ++++|.|++
T Consensus 29 ~~I~iiG~G~~G~~la~~l~----------~~g~~V~~~~r~~~~~~~~~~~g~~~~-----~---~~~~-~~~~DvVi~ 89 (215)
T 2vns_A 29 PKVGILGSGDFARSLATRLV----------GSGFKVVVGSRNPKRTARLFPSAAQVT-----F---QEEA-VSSPEVIFV 89 (215)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HTTCCEEEEESSHHHHHHHSBTTSEEE-----E---HHHH-TTSCSEEEE
T ss_pred CEEEEEccCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCcee-----c---HHHH-HhCCCEEEE
Confidence 47999999999999999998 789999999999999888877665542 1 2222 468999999
Q ss_pred EeCCH
Q 003861 612 MYTDK 616 (791)
Q Consensus 612 ~~~~d 616 (791)
++..+
T Consensus 90 av~~~ 94 (215)
T 2vns_A 90 AVFRE 94 (215)
T ss_dssp CSCGG
T ss_pred CCChH
Confidence 98864
No 83
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=95.85 E-value=0.0087 Score=65.74 Aligned_cols=113 Identities=16% Similarity=0.127 Sum_probs=77.4
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCC-CEEEccCCCHHHHHhcC----CC
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGF-PILYGDASRPAVLLSAG----IT 604 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~-~~v~GD~t~~~~L~~ag----i~ 604 (791)
.+.+++|+|.|.+++.+++.+. ..|++|+++|..++.....+-.+. .++..++ .+.+.+.. ++
T Consensus 203 P~~rL~IfGAGhva~ala~~a~----------~lg~~V~v~D~R~~~~~~~~fp~a~~~~~~~p--~~~~~~~~~~~~~~ 270 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQGA----------FLGYRVTVCDARPVFATTARFPTADEVVVDWP--HRYLAAQAEAGAID 270 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHHH----------HTTCEEEEEESCTTTSCTTTCSSSSEEEESCH--HHHHHHHHHHTCCC
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------hCCCEEEEECCchhhcccccCCCceEEEeCCh--HHHHHhhccccCCC
Confidence 4568999999999999999998 899999999999885443332333 4555544 56676666 78
Q ss_pred CCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhH---HHHHHCCCC
Q 003861 605 SPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHL---LDLKKAGAT 654 (791)
Q Consensus 605 ~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~---~~L~~~Gad 654 (791)
.-++++++|.|.+....+...+-+...--+|=+--....+. +.|++.|.+
T Consensus 271 ~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG~iGSrrk~~~~~~rL~~~G~~ 323 (386)
T 2we8_A 271 ARTVVCVLTHDPKFDVPLLEVALRLPDIAYIGAMGSRRTHEDRLARLREAGLT 323 (386)
T ss_dssp TTCEEEECCCCHHHHHHHHHHHTTSSCCSEEEECCCHHHHHHHHHHHHHTTCC
T ss_pred CCcEEEEEECChHhHHHHHHHHhcCCCCCEEEEecChhHHHHHHHHHHhCCCC
Confidence 88899999999777777666666553122444433333333 344556653
No 84
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=95.84 E-value=0.02 Score=61.02 Aligned_cols=71 Identities=17% Similarity=0.160 Sum_probs=59.2
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++|.|. |.+|+.+++.|. +.|++|++++.+++..+.+.+.+..++.+|.+|++.++++ ++++|+||-
T Consensus 15 ~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vih 83 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIR----------AAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAGLERA-LRGLDGVIF 83 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHH----------HTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCHHHHHHH-TTTCSEEEE
T ss_pred EEEEECCCcHHHHHHHHHHH----------HCCCEEEEEecChHhhhhhccCCeEEEEecCCCHHHHHHH-HcCCCEEEE
Confidence 6899995 999999999998 7899999999998876666656889999999999998876 457898876
Q ss_pred EeC
Q 003861 612 MYT 614 (791)
Q Consensus 612 ~~~ 614 (791)
+..
T Consensus 84 ~a~ 86 (342)
T 2x4g_A 84 SAG 86 (342)
T ss_dssp C--
T ss_pred CCc
Confidence 654
No 85
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=95.82 E-value=0.015 Score=61.03 Aligned_cols=90 Identities=17% Similarity=0.280 Sum_probs=62.4
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.++.|+|+ |.+|..+++.|. +.|++|+++|.++++.+.+.+.|..+ . +..+ -++++|.|+
T Consensus 12 m~I~iIG~tG~mG~~la~~l~----------~~g~~V~~~~r~~~~~~~~~~~g~~~--~--~~~~-----~~~~aDvVi 72 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKIH----------DSAHHLAAIEIAPEGRDRLQGMGIPL--T--DGDG-----WIDEADVVV 72 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HSSSEEEEECCSHHHHHHHHHTTCCC--C--CSSG-----GGGTCSEEE
T ss_pred CEEEEECCCCHHHHHHHHHHH----------hCCCEEEEEECCHHHHHHHHhcCCCc--C--CHHH-----HhcCCCEEE
Confidence 47999999 999999999998 78999999999999998888766432 1 1122 246799999
Q ss_pred EEeCCHHHHHHHHHHHHHh-CCCCcEEEEecCh
Q 003861 611 IMYTDKKRTIEAVQRLRLA-FPAIPIYARAQDM 642 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l-~p~~~iiara~~~ 642 (791)
++++++.. ..+...++.. .|+ .+++...+-
T Consensus 73 ~av~~~~~-~~v~~~l~~~l~~~-~ivv~~s~~ 103 (286)
T 3c24_A 73 LALPDNII-EKVAEDIVPRVRPG-TIVLILDAA 103 (286)
T ss_dssp ECSCHHHH-HHHHHHHGGGSCTT-CEEEESCSH
T ss_pred EcCCchHH-HHHHHHHHHhCCCC-CEEEECCCC
Confidence 99987652 2333333332 334 455544443
No 86
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=95.81 E-value=0.023 Score=60.72 Aligned_cols=110 Identities=15% Similarity=0.231 Sum_probs=73.3
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEcc---------CCCHHHHHh
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGD---------ASRPAVLLS 600 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD---------~t~~~~L~~ 600 (791)
...++.|+|.|.+|..++..|. +.|++|+++ .++++++.+++.|......+ .++.+ +
T Consensus 18 ~~~kI~IiGaGa~G~~~a~~L~----------~~G~~V~l~-~~~~~~~~i~~~g~~~~~~~~~~~~~~~~~~~~~---~ 83 (318)
T 3hwr_A 18 QGMKVAIMGAGAVGCYYGGMLA----------RAGHEVILI-ARPQHVQAIEATGLRLETQSFDEQVKVSASSDPS---A 83 (318)
T ss_dssp --CEEEEESCSHHHHHHHHHHH----------HTTCEEEEE-CCHHHHHHHHHHCEEEECSSCEEEECCEEESCGG---G
T ss_pred cCCcEEEECcCHHHHHHHHHHH----------HCCCeEEEE-EcHhHHHHHHhCCeEEEcCCCcEEEeeeeeCCHH---H
Confidence 3457999999999999999998 789999999 99999999988775543111 12222 2
Q ss_pred cCCCCCcEEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEecChhhHHHHHH-CCCCeEE
Q 003861 601 AGITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMMHLLDLKK-AGATDAI 657 (791)
Q Consensus 601 agi~~a~~viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~~~~~~~~L~~-~Gad~Vi 657 (791)
++++|.+++++.... .-.++..++. +.|+..|+.-.+--++.+.+.+ .+ +.++
T Consensus 84 --~~~~D~vilavk~~~-~~~~l~~l~~~l~~~~~iv~~~nGi~~~~~l~~~~~-~~vl 138 (318)
T 3hwr_A 84 --VQGADLVLFCVKSTD-TQSAALAMKPALAKSALVLSLQNGVENADTLRSLLE-QEVA 138 (318)
T ss_dssp --GTTCSEEEECCCGGG-HHHHHHHHTTTSCTTCEEEEECSSSSHHHHHHHHCC-SEEE
T ss_pred --cCCCCEEEEEccccc-HHHHHHHHHHhcCCCCEEEEeCCCCCcHHHHHHHcC-CcEE
Confidence 368999999998763 2333333433 3445445656666666555544 45 5554
No 87
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=95.81 E-value=0.014 Score=61.20 Aligned_cols=92 Identities=17% Similarity=0.263 Sum_probs=60.6
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-------------CCCE---------EE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-------------GFPI---------LY 589 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-------------~~~~---------v~ 589 (791)
+++.|+|.|.+|..+|+.|. +.|++|++.|.+++..+++.+. +... +.
T Consensus 5 ~kV~VIGaG~mG~~iA~~la----------~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~ 74 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTA----------FHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIR 74 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCE
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeE
Confidence 47999999999999999998 7899999999999998777643 1100 00
Q ss_pred ccCCCHHHHHhcCCCCCcEEEEEeCCHHHH-HHHHHHHHHh-CCCCcEEEEe
Q 003861 590 GDASRPAVLLSAGITSPKAVMIMYTDKKRT-IEAVQRLRLA-FPAIPIYARA 639 (791)
Q Consensus 590 GD~t~~~~L~~agi~~a~~viv~~~~d~~n-~~~~~~ar~l-~p~~~iiara 639 (791)
. .+| +++ .+++||.||.+..++.+. ..+...+.+. .|+ .+++..
T Consensus 75 ~-~~~---~~~-~~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~-~il~s~ 120 (283)
T 4e12_A 75 Y-SDD---LAQ-AVKDADLVIEAVPESLDLKRDIYTKLGELAPAK-TIFATN 120 (283)
T ss_dssp E-ESC---HHH-HTTTCSEEEECCCSCHHHHHHHHHHHHHHSCTT-CEEEEC
T ss_pred E-eCC---HHH-HhccCCEEEEeccCcHHHHHHHHHHHHhhCCCC-cEEEEC
Confidence 0 112 211 257899999999886322 2233334443 444 455543
No 88
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=95.81 E-value=0.0051 Score=61.16 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=58.5
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++|.|. |.+|+.+++.|. +.|++|++++.+++..+.+. .+..++.+|.+|++. +. ++++|+||-
T Consensus 2 kvlVtGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~-~~~~~~~~D~~d~~~-~~--~~~~d~vi~ 67 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAK----------NRGHEVTAIVRNAGKITQTH-KDINILQKDIFDLTL-SD--LSDQNVVVD 67 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCSHHHHHHC-SSSEEEECCGGGCCH-HH--HTTCSEEEE
T ss_pred eEEEEcCCchhHHHHHHHHH----------hCCCEEEEEEcCchhhhhcc-CCCeEEeccccChhh-hh--hcCCCEEEE
Confidence 4789995 999999999998 78999999999999887766 789999999999887 33 367898888
Q ss_pred EeCC
Q 003861 612 MYTD 615 (791)
Q Consensus 612 ~~~~ 615 (791)
+.+.
T Consensus 68 ~ag~ 71 (221)
T 3ew7_A 68 AYGI 71 (221)
T ss_dssp CCCS
T ss_pred CCcC
Confidence 7754
No 89
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=95.80 E-value=0.021 Score=61.07 Aligned_cols=105 Identities=13% Similarity=0.125 Sum_probs=66.6
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCC-CcEEEEcCCh-------hhHHHHHhcCCCEEEccCCCHHHHHhc
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNP-------SVVKESRKLGFPILYGDASRPAVLLSA 601 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g-~~vvvID~d~-------~~v~~~~~~~~~~v~GD~t~~~~L~~a 601 (791)
+..++.|+|+|.+|..+++.|. +.| ++|++.|.++ +..+++.+.|. .. .+..+.
T Consensus 23 M~m~IgvIG~G~mG~~lA~~L~----------~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~---~~-~s~~e~---- 84 (317)
T 4ezb_A 23 MMTTIAFIGFGEAAQSIAGGLG----------GRNAARLAAYDLRFNDPAASGALRARAAELGV---EP-LDDVAG---- 84 (317)
T ss_dssp SCCEEEEECCSHHHHHHHHHHH----------TTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC---EE-ESSGGG----
T ss_pred cCCeEEEECccHHHHHHHHHHH----------HcCCCeEEEEeCCCccccchHHHHHHHHHCCC---CC-CCHHHH----
Confidence 3457999999999999999998 889 9999999998 56666666665 11 022233
Q ss_pred CCCCCcEEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEecC--hhh----HHHHHHCCCCe
Q 003861 602 GITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQD--MMH----LLDLKKAGATD 655 (791)
Q Consensus 602 gi~~a~~viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~~--~~~----~~~L~~~Gad~ 655 (791)
++++|.|+++++++...-. +..+.+ +.|+ .+++-..+ +.. .+.+++.|+..
T Consensus 85 -~~~aDvVi~avp~~~~~~~-~~~i~~~l~~~-~ivv~~st~~p~~~~~~~~~l~~~g~~~ 142 (317)
T 4ezb_A 85 -IACADVVLSLVVGAATKAV-AASAAPHLSDE-AVFIDLNSVGPDTKALAAGAIATGKGSF 142 (317)
T ss_dssp -GGGCSEEEECCCGGGHHHH-HHHHGGGCCTT-CEEEECCSCCHHHHHHHHHHHHTSSCEE
T ss_pred -HhcCCEEEEecCCHHHHHH-HHHHHhhcCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeE
Confidence 3568999999887643322 233322 3344 45544332 222 23455556654
No 90
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=95.77 E-value=0.011 Score=62.81 Aligned_cols=112 Identities=14% Similarity=0.060 Sum_probs=76.0
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCC-CHHHHH--hcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDAS-RPAVLL--SAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t-~~~~L~--~agi~~a~~ 608 (791)
.++.|+|.|.+|..++..|. .|.+|.+++.++++.+.+++.|..... +.. .+.... ..-.+.+|.
T Consensus 3 mkI~IiGaGa~G~~~a~~L~-----------~g~~V~~~~r~~~~~~~l~~~G~~~~~-~~~~~~~~~~~~~~~~~~~D~ 70 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYLS-----------LYHDVTVVTRRQEQAAAIQSEGIRLYK-GGEEFRADCSADTSINSDFDL 70 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH-----------TTSEEEEECSCHHHHHHHHHHCEEEEE-TTEEEEECCEEESSCCSCCSE
T ss_pred CEEEEECCCHHHHHHHHHHh-----------cCCceEEEECCHHHHHHHHhCCceEec-CCCeecccccccccccCCCCE
Confidence 36899999999999999994 688999999999999888887766542 211 000000 123578999
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHC-CCCeEE
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKA-GATDAI 657 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~-Gad~Vi 657 (791)
+++++.... .-.++..++...++. |+.-.|--.+.+.+++. |.+.|+
T Consensus 71 vilavK~~~-~~~~l~~l~~~~~~~-ivs~~nGi~~~e~l~~~~~~~~vl 118 (307)
T 3ego_A 71 LVVTVKQHQ-LQSVFSSLERIGKTN-ILFLQNGMGHIHDLKDWHVGHSIY 118 (307)
T ss_dssp EEECCCGGG-HHHHHHHTTSSCCCE-EEECCSSSHHHHHHHTCCCSCEEE
T ss_pred EEEEeCHHH-HHHHHHHhhcCCCCe-EEEecCCccHHHHHHHhCCCCcEE
Confidence 999987642 222333344444444 77777777777778776 666654
No 91
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=95.67 E-value=0.025 Score=63.58 Aligned_cols=111 Identities=14% Similarity=0.050 Sum_probs=75.7
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc--CCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL--GFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~--~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
++++|+|.|.+|+.+++.|. +.|.+|++.|.++++.+.+.+. +...+.+|.+|.+.++++ ++++|.|
T Consensus 4 k~VlViGaG~iG~~ia~~L~----------~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~-l~~~DvV 72 (450)
T 1ff9_A 4 KSVLMLGSGFVTRPTLDVLT----------DSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAE-VAKHDLV 72 (450)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------TTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHH-HTTSSEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHH-HcCCcEE
Confidence 46889999999999999998 7889999999999988876543 355788999998877654 3589999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEEec----ChhhHHHHHHCCCCeE
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ----DMMHLLDLKKAGATDA 656 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiara~----~~~~~~~L~~~Gad~V 656 (791)
|.+++..... .+...+-+. +.+++.... .....+..+++|+..+
T Consensus 73 In~a~~~~~~-~i~~a~l~~--g~~vvd~~~~~~~~~~l~~aA~~aGv~~i 120 (450)
T 1ff9_A 73 ISLIPYTFHA-TVIKSAIRQ--KKHVVTTSYVSPAMMELDQAAKDAGITVM 120 (450)
T ss_dssp EECCC--CHH-HHHHHHHHH--TCEEEESSCCCHHHHHTHHHHHHTTCEEE
T ss_pred EECCccccch-HHHHHHHhC--CCeEEEeecccHHHHHHHHHHHHCCCeEE
Confidence 9988764221 122222222 245554432 1233455577888643
No 92
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=95.67 E-value=0.019 Score=59.27 Aligned_cols=65 Identities=26% Similarity=0.330 Sum_probs=51.1
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcC--ChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL--NPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~--d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
++.|+|+|.+|..+++.|. +.|++|++.|. +++..+++.+.|.. .+..+.+ +++|.|+
T Consensus 2 ~I~iIG~G~mG~~la~~l~----------~~g~~V~~~~~~~~~~~~~~~~~~g~~-----~~~~~~~-----~~aDvvi 61 (264)
T 1i36_A 2 RVGFIGFGEVAQTLASRLR----------SRGVEVVTSLEGRSPSTIERARTVGVT-----ETSEEDV-----YSCPVVI 61 (264)
T ss_dssp EEEEESCSHHHHHHHHHHH----------HTTCEEEECCTTCCHHHHHHHHHHTCE-----ECCHHHH-----HTSSEEE
T ss_pred eEEEEechHHHHHHHHHHH----------HCCCeEEEeCCccCHHHHHHHHHCCCc-----CCHHHHH-----hcCCEEE
Confidence 4789999999999999998 78999999888 77888888776654 2223333 4789999
Q ss_pred EEeCCHH
Q 003861 611 IMYTDKK 617 (791)
Q Consensus 611 v~~~~d~ 617 (791)
++++++.
T Consensus 62 ~~v~~~~ 68 (264)
T 1i36_A 62 SAVTPGV 68 (264)
T ss_dssp ECSCGGG
T ss_pred EECCCHH
Confidence 9998764
No 93
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=95.59 E-value=0.026 Score=61.28 Aligned_cols=110 Identities=18% Similarity=0.110 Sum_probs=80.6
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCC-EEEccCCCHHHHHhcCCCCCcE
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFP-ILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~-~v~GD~t~~~~L~~agi~~a~~ 608 (791)
.+.+++|+|.|.+++.+++.+. ..|++|+++|..++.....+=.+.. ++.+++ ++.+++..+..-++
T Consensus 198 p~~~L~I~GaGhva~aLa~la~----------~lgf~V~v~D~R~~~~~~~~fp~a~~v~~~~p--~~~~~~~~~~~~t~ 265 (362)
T 3on5_A 198 PKERLIIFGAGPDVPPLVTFAS----------NVGFYTVVTDWRPNQCEKHFFPDADEIIVDFP--ADFLRKFLIRPDDF 265 (362)
T ss_dssp CCEEEEEECCSTTHHHHHHHHH----------HHTEEEEEEESCGGGGCGGGCTTCSEEEESCH--HHHHHHSCCCTTCE
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HCCCeEEEECCCccccccccCCCceEEecCCH--HHHHhhcCCCCCeE
Confidence 3568999999999999999998 7899999999999876544433443 555544 56788888999999
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhHHHHHHCCC
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHLLDLKKAGA 653 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~~~L~~~Ga 653 (791)
++++|-|......+...+-+. +..-|.-.-+....++|.+.|.
T Consensus 266 vvv~TH~h~~D~~~L~~aL~~--~~~YiG~iGSr~R~~rl~~~g~ 308 (362)
T 3on5_A 266 VLIMTHHFQKDQEILHFLLEK--ELRYIGILGSKERTRRLLQNRK 308 (362)
T ss_dssp EEECCSCHHHHHHHHHHHSSS--CCSEEEESSCHHHHHHHHTSCC
T ss_pred EEEEeCCchhhHHHHHHHhcC--CCCEEEEeCCHHHHHHHHhcCC
Confidence 999998865555555555443 3555666666666667776654
No 94
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=95.53 E-value=0.038 Score=60.10 Aligned_cols=95 Identities=18% Similarity=0.234 Sum_probs=62.3
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEE-cc---------CCCHHHHHh
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILY-GD---------ASRPAVLLS 600 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~-GD---------~t~~~~L~~ 600 (791)
..++.|+|.|.+|..++..|. +.|++|.++|.|+++++.+++.+.+..+ .+ .+|. ++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La----------~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t~d~---~e 95 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLA----------RKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAYCDL---KA 95 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHH----------TTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEESCH---HH
T ss_pred CCeEEEECccHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEECCH---HH
Confidence 347999999999999999998 8899999999999999988765432110 00 0222 11
Q ss_pred cCCCCCcEEEEEeCCHHHHHHHHHHHHHh-CCCCcEEEEec
Q 003861 601 AGITSPKAVMIMYTDKKRTIEAVQRLRLA-FPAIPIYARAQ 640 (791)
Q Consensus 601 agi~~a~~viv~~~~d~~n~~~~~~ar~l-~p~~~iiara~ 640 (791)
+ ++++|.++++++... --.++..++.. .|+..++.-.+
T Consensus 96 a-~~~aDvVilaVp~~~-~~~vl~~i~~~l~~~~ivvs~~k 134 (356)
T 3k96_A 96 S-LEGVTDILIVVPSFA-FHEVITRMKPLIDAKTRIAWGTK 134 (356)
T ss_dssp H-HTTCCEEEECCCHHH-HHHHHHHHGGGCCTTCEEEECCC
T ss_pred H-HhcCCEEEECCCHHH-HHHHHHHHHHhcCCCCEEEEEeC
Confidence 1 367999999998652 22333334433 34433444333
No 95
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=95.51 E-value=0.041 Score=56.61 Aligned_cols=66 Identities=17% Similarity=0.209 Sum_probs=51.6
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
++.|+|+|.+|+.+++.|. +.|++|.+.|.++++.+.+.+. |..+ .++.+.+- +++|.|++
T Consensus 5 ~i~iiG~G~mG~~~a~~l~----------~~g~~v~~~~~~~~~~~~~~~~~g~~~----~~~~~~~~----~~~D~Vi~ 66 (259)
T 2ahr_A 5 KIGIIGVGKMASAIIKGLK----------QTPHELIISGSSLERSKEIAEQLALPY----AMSHQDLI----DQVDLVIL 66 (259)
T ss_dssp EEEEECCSHHHHHHHHHHT----------TSSCEEEEECSSHHHHHHHHHHHTCCB----CSSHHHHH----HTCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCeEEEECCCHHHHHHHHHHcCCEe----eCCHHHHH----hcCCEEEE
Confidence 6899999999999999998 7789999999999998887753 6542 23333221 37899999
Q ss_pred EeCCH
Q 003861 612 MYTDK 616 (791)
Q Consensus 612 ~~~~d 616 (791)
+++.+
T Consensus 67 ~v~~~ 71 (259)
T 2ahr_A 67 GIKPQ 71 (259)
T ss_dssp CSCGG
T ss_pred EeCcH
Confidence 99843
No 96
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=95.44 E-value=0.035 Score=56.85 Aligned_cols=66 Identities=15% Similarity=0.318 Sum_probs=51.5
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC----cEEEEcCChhhHHHHHh-cCCCEEEccCCC-HHHHHhcCCCC
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW----PFVAFDLNPSVVKESRK-LGFPILYGDASR-PAVLLSAGITS 605 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~----~vvvID~d~~~v~~~~~-~~~~~v~GD~t~-~~~L~~agi~~ 605 (791)
.++.|+|+|.+|..+++.|. +.|+ +|.+.|.++++.+++.+ .|..+ .++ .+.+ ++
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~----------~~g~~~~~~V~~~~r~~~~~~~~~~~~g~~~----~~~~~e~~-----~~ 63 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMI----------NKNIVSSNQIICSDLNTANLKNASEKYGLTT----TTDNNEVA-----KN 63 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HTTSSCGGGEEEECSCHHHHHHHHHHHCCEE----CSCHHHHH-----HH
T ss_pred CeEEEECccHHHHHHHHHHH----------hCCCCCCCeEEEEeCCHHHHHHHHHHhCCEE----eCChHHHH-----Hh
Confidence 46999999999999999998 7887 99999999999988865 46543 223 3334 35
Q ss_pred CcEEEEEeCCH
Q 003861 606 PKAVMIMYTDK 616 (791)
Q Consensus 606 a~~viv~~~~d 616 (791)
+|.|+++++.+
T Consensus 64 aDvVilav~~~ 74 (247)
T 3gt0_A 64 ADILILSIKPD 74 (247)
T ss_dssp CSEEEECSCTT
T ss_pred CCEEEEEeCHH
Confidence 89899888553
No 97
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=95.43 E-value=0.027 Score=56.92 Aligned_cols=71 Identities=15% Similarity=0.197 Sum_probs=58.1
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCC--CCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~--g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
++++|.| .|.+|+.+++.|. +. |++|++++.+++..+.+ ..+..++.+|.+|++.++++ ++++|.
T Consensus 5 ~~ilVtGasG~iG~~l~~~l~----------~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~D~~d~~~~~~~-~~~~d~ 72 (253)
T 1xq6_A 5 PTVLVTGASGRTGQIVYKKLK----------EGSDKFVAKGLVRSAQGKEKI-GGEADVFIGDITDADSINPA-FQGIDA 72 (253)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTTTCEEEEEESCHHHHHHT-TCCTTEEECCTTSHHHHHHH-HTTCSE
T ss_pred CEEEEEcCCcHHHHHHHHHHH----------hcCCCcEEEEEEcCCCchhhc-CCCeeEEEecCCCHHHHHHH-HcCCCE
Confidence 4688888 5999999999998 66 89999999999877655 45688999999999988875 356888
Q ss_pred EEEEeC
Q 003861 609 VMIMYT 614 (791)
Q Consensus 609 viv~~~ 614 (791)
+|-+.+
T Consensus 73 vi~~a~ 78 (253)
T 1xq6_A 73 LVILTS 78 (253)
T ss_dssp EEECCC
T ss_pred EEEecc
Confidence 876543
No 98
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=95.42 E-value=0.04 Score=55.47 Aligned_cols=67 Identities=15% Similarity=0.241 Sum_probs=53.1
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEE-EcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVA-FDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvv-ID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
.++.|+|+|.+|..+++.|. +.|++|++ .|.++++.+++.+ .+..... ++.+. ++++|.+
T Consensus 24 mkI~IIG~G~mG~~la~~l~----------~~g~~V~~v~~r~~~~~~~l~~~~g~~~~~---~~~~~-----~~~aDvV 85 (220)
T 4huj_A 24 TTYAIIGAGAIGSALAERFT----------AAQIPAIIANSRGPASLSSVTDRFGASVKA---VELKD-----ALQADVV 85 (220)
T ss_dssp CCEEEEECHHHHHHHHHHHH----------HTTCCEEEECTTCGGGGHHHHHHHTTTEEE---CCHHH-----HTTSSEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCEEEEEECCCHHHHHHHHHHhCCCccc---ChHHH-----HhcCCEE
Confidence 47999999999999999998 78999999 9999999888654 4655543 23333 3678999
Q ss_pred EEEeCCH
Q 003861 610 MIMYTDK 616 (791)
Q Consensus 610 iv~~~~d 616 (791)
+++++.+
T Consensus 86 ilavp~~ 92 (220)
T 4huj_A 86 ILAVPYD 92 (220)
T ss_dssp EEESCGG
T ss_pred EEeCChH
Confidence 9998754
No 99
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=95.40 E-value=0.029 Score=57.82 Aligned_cols=63 Identities=16% Similarity=0.150 Sum_probs=50.5
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCC-CcEEEEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g-~~vvvID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
++.|+|.|.+|..+++.|. +.| ++|.++|.++++.+.+.+. |..+ ..|.. + -+ ++|.|+
T Consensus 2 ~i~iiG~G~mG~~~a~~l~----------~~g~~~v~~~~r~~~~~~~~~~~~g~~~-~~~~~------~-~~-~~D~vi 62 (263)
T 1yqg_A 2 NVYFLGGGNMAAAVAGGLV----------KQGGYRIYIANRGAEKRERLEKELGVET-SATLP------E-LH-SDDVLI 62 (263)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HHCSCEEEEECSSHHHHHHHHHHTCCEE-ESSCC------C-CC-TTSEEE
T ss_pred EEEEECchHHHHHHHHHHH----------HCCCCeEEEECCCHHHHHHHHHhcCCEE-eCCHH------H-Hh-cCCEEE
Confidence 4789999999999999998 778 9999999999999888764 6543 33322 1 24 789999
Q ss_pred EEeC
Q 003861 611 IMYT 614 (791)
Q Consensus 611 v~~~ 614 (791)
++++
T Consensus 63 ~~v~ 66 (263)
T 1yqg_A 63 LAVK 66 (263)
T ss_dssp ECSC
T ss_pred EEeC
Confidence 9998
No 100
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=95.38 E-value=0.032 Score=58.53 Aligned_cols=139 Identities=20% Similarity=0.280 Sum_probs=81.2
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCH-HHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~-~~L~~agi~~a~~viv 611 (791)
++.|+|+|.+|..+++.|. +.|++|++.|.++++.+.+.+.|..+ .++. +.+ +++|.|++
T Consensus 2 ~i~iiG~G~mG~~~a~~l~----------~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~~-----~~~Dvvi~ 62 (296)
T 2gf2_A 2 PVGFIGLGNMGNPMAKNLM----------KHGYPLIIYDVFPDACKEFQDAGEQV----VSSPADVA-----EKADRIIT 62 (296)
T ss_dssp CEEEECCSTTHHHHHHHHH----------HTTCCEEEECSSTHHHHHHHTTTCEE----CSSHHHHH-----HHCSEEEE
T ss_pred eEEEEeccHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCee----cCCHHHHH-----hcCCEEEE
Confidence 5889999999999999998 78999999999999999888776543 1233 333 35799999
Q ss_pred EeCCHHHHHHHHHHHH----HhCCCCcEEEEecChhh--H----HHHHHCCCCeEEcCcHHHHHHHHHHH--HhhcCCCh
Q 003861 612 MYTDKKRTIEAVQRLR----LAFPAIPIYARAQDMMH--L----LDLKKAGATDAILENAETSLQLGSKL--LKGFGVMS 679 (791)
Q Consensus 612 ~~~~d~~n~~~~~~ar----~l~p~~~iiara~~~~~--~----~~L~~~Gad~Vi~p~~~~~~~la~~~--l~~l~~~~ 679 (791)
+++++...-.+....+ .+.++ .+++....-.. . +.+.+.|...+-.|. ..+..-+..- .-..+.++
T Consensus 63 ~vp~~~~~~~v~~~~~~~~~~l~~~-~~vv~~s~~~~~~~~~~~~~~~~~g~~~~~~p~-~~g~~~a~~~~~~~~~~~~~ 140 (296)
T 2gf2_A 63 MLPTSINAIEAYSGANGILKKVKKG-SLLIDSSTIDPAVSKELAKEVEKMGAVFMDAPV-SGGVGAARSGNLTFMVGGVE 140 (296)
T ss_dssp CCSSHHHHHHHHHSTTSGGGTCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEECCE-ESHHHHHHHTCEEEEEESCG
T ss_pred eCCCHHHHHHHHhCchhHHhcCCCC-CEEEECCCCCHHHHHHHHHHHHHcCCEEEEcCC-CCChhHHhcCcEEEEeCCCH
Confidence 9876544333332221 22344 35554543222 2 224445654443343 2222211110 00113345
Q ss_pred HHHHHHHHHHhcc
Q 003861 680 DDVTFLRQLVRNS 692 (791)
Q Consensus 680 ~~~~~l~~~~~~~ 692 (791)
+..+.+.++++.-
T Consensus 141 ~~~~~v~~l~~~~ 153 (296)
T 2gf2_A 141 DEFAAAQELLGCM 153 (296)
T ss_dssp GGHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHH
Confidence 5667776666653
No 101
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=95.36 E-value=0.02 Score=53.39 Aligned_cols=69 Identities=13% Similarity=0.211 Sum_probs=52.7
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH-hcCCCEEEccCCCH-HHHHhcCCCCCcE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR-KLGFPILYGDASRP-AVLLSAGITSPKA 608 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~-~~~~~~v~GD~t~~-~~L~~agi~~a~~ 608 (791)
.+++.|+|.|.+|+.+++.|. +.|.++++.|.++++.+.+. +.+..+. +..+. +.+ +++|.
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l~----------~~g~~v~v~~r~~~~~~~~a~~~~~~~~--~~~~~~~~~-----~~~Di 83 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYFS----------YPQYKVTVAGRNIDHVRAFAEKYEYEYV--LINDIDSLI-----KNNDV 83 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGCC----------TTTCEEEEEESCHHHHHHHHHHHTCEEE--ECSCHHHHH-----HTCSE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCEEEEEcCCHHHHHHHHHHhCCceE--eecCHHHHh-----cCCCE
Confidence 558999999999999999998 78889999999999987754 4454333 22332 222 46899
Q ss_pred EEEEeCCH
Q 003861 609 VMIMYTDK 616 (791)
Q Consensus 609 viv~~~~d 616 (791)
++.+++.+
T Consensus 84 vi~at~~~ 91 (144)
T 3oj0_A 84 IITATSSK 91 (144)
T ss_dssp EEECSCCS
T ss_pred EEEeCCCC
Confidence 99999875
No 102
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=95.35 E-value=0.028 Score=60.60 Aligned_cols=68 Identities=22% Similarity=0.306 Sum_probs=52.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhh-HHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV-VKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~-v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.++.|+|+|.+|..+++.|. +.|++|++.|.+++. .+.+.+.|..+. +.++.+ +++|.|+
T Consensus 17 ~~I~IIG~G~mG~alA~~L~----------~~G~~V~~~~~~~~~~~~~a~~~G~~~~----~~~e~~-----~~aDvVi 77 (338)
T 1np3_A 17 KKVAIIGYGSQGHAHACNLK----------DSGVDVTVGLRSGSATVAKAEAHGLKVA----DVKTAV-----AAADVVM 77 (338)
T ss_dssp SCEEEECCSHHHHHHHHHHH----------HTTCCEEEECCTTCHHHHHHHHTTCEEE----CHHHHH-----HTCSEEE
T ss_pred CEEEEECchHHHHHHHHHHH----------HCcCEEEEEECChHHHHHHHHHCCCEEc----cHHHHH-----hcCCEEE
Confidence 46999999999999999998 789999999998876 566677776432 222333 4789999
Q ss_pred EEeCCHHH
Q 003861 611 IMYTDKKR 618 (791)
Q Consensus 611 v~~~~d~~ 618 (791)
++++++..
T Consensus 78 lavp~~~~ 85 (338)
T 1np3_A 78 ILTPDEFQ 85 (338)
T ss_dssp ECSCHHHH
T ss_pred EeCCcHHH
Confidence 99887543
No 103
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=95.31 E-value=0.074 Score=56.80 Aligned_cols=131 Identities=15% Similarity=0.208 Sum_probs=81.3
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHHHHHh---cCC-----CEEEccCCCHHHHHhcC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKESRK---LGF-----PILYGDASRPAVLLSAG 602 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~~~~~---~~~-----~~v~GD~t~~~~L~~ag 602 (791)
++.|+|.|.+|..++..|. ..|+ +|+++|.|+++++.... .+. .-+.. +|.+ .
T Consensus 2 kI~VIGaG~~G~~la~~l~----------~~g~~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~d~~-----~ 64 (319)
T 1a5z_A 2 KIGIVGLGRVGSSTAFALL----------MKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANIYA--GDYA-----D 64 (319)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEEEE--CCGG-----G
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCCeEEEEeCChHHHHHHHHHHHhhhhhcCCcEEEe--CCHH-----H
Confidence 5789999999999999998 6777 99999999988766432 111 11222 3332 2
Q ss_pred CCCCcEEEEEeCCHH-----------HH----HHHHHHHHHhCCCCcEEEEecChhhH--HHHHHC---CCCeEEcC-cH
Q 003861 603 ITSPKAVMIMYTDKK-----------RT----IEAVQRLRLAFPAIPIYARAQDMMHL--LDLKKA---GATDAILE-NA 661 (791)
Q Consensus 603 i~~a~~viv~~~~d~-----------~n----~~~~~~ar~l~p~~~iiara~~~~~~--~~L~~~---Gad~Vi~p-~~ 661 (791)
+++||.||++.+... .| ..++..+++..|+..++. +.|+... ..+.+. ..++|+-- ..
T Consensus 65 ~~~aDvViiav~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~-~tNp~~~~~~~~~~~~~~~~~rviG~~t~ 143 (319)
T 1a5z_A 65 LKGSDVVIVAAGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIV-VTNPVDVLTYFFLKESGMDPRKVFGSGTV 143 (319)
T ss_dssp GTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE-CSSSHHHHHHHHHHHHTCCTTTEEECTTH
T ss_pred hCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-eCCcHHHHHHHHHHHhCCChhhEEeeCcc
Confidence 578999999987521 12 234555666678766555 4554443 333333 45567643 33
Q ss_pred HHHHHHHHHHHhhcCCChHH
Q 003861 662 ETSLQLGSKLLKGFGVMSDD 681 (791)
Q Consensus 662 ~~~~~la~~~l~~l~~~~~~ 681 (791)
+-..++...+-+.+++++..
T Consensus 144 ld~~r~~~~la~~lgv~~~~ 163 (319)
T 1a5z_A 144 LDTARLRTLIAQHCGFSPRS 163 (319)
T ss_dssp HHHHHHHHHHHHHHTCCGGG
T ss_pred HHHHHHHHHHHHHhCcCHHH
Confidence 33455555666666666643
No 104
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=95.31 E-value=0.024 Score=59.46 Aligned_cols=67 Identities=21% Similarity=0.250 Sum_probs=52.4
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMIM 612 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~ 612 (791)
++.|+|+|.+|+.+++.|. +.|++|+++| ++++.+.+.+.|... .++.+-+ ++++|.|+++
T Consensus 5 ~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~-~~~~~~~~~~~g~~~----~~~~~~~----~~~~D~vi~~ 65 (295)
T 1yb4_A 5 KLGFIGLGIMGSPMAINLA----------RAGHQLHVTT-IGPVADELLSLGAVN----VETARQV----TEFADIIFIM 65 (295)
T ss_dssp EEEECCCSTTHHHHHHHHH----------HTTCEEEECC-SSCCCHHHHTTTCBC----CSSHHHH----HHTCSEEEEC
T ss_pred EEEEEccCHHHHHHHHHHH----------hCCCEEEEEc-CHHHHHHHHHcCCcc----cCCHHHH----HhcCCEEEEE
Confidence 6899999999999999998 7899999999 999988887766432 2233221 2468999999
Q ss_pred eCCHHH
Q 003861 613 YTDKKR 618 (791)
Q Consensus 613 ~~~d~~ 618 (791)
++++..
T Consensus 66 vp~~~~ 71 (295)
T 1yb4_A 66 VPDTPQ 71 (295)
T ss_dssp CSSHHH
T ss_pred CCCHHH
Confidence 987654
No 105
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=95.31 E-value=0.076 Score=60.13 Aligned_cols=110 Identities=16% Similarity=0.158 Sum_probs=70.8
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-----cCCCEEEccCCCHH-HHHhcCCCCC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----LGFPILYGDASRPA-VLLSAGITSP 606 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-----~~~~~v~GD~t~~~-~L~~agi~~a 606 (791)
++.|+|.|.+|+.++..|. +.|++|.+.|.++++++.+.+ .+... .++.+ ..+ .++++
T Consensus 4 ~IgvIG~G~mG~~lA~~La----------~~G~~V~v~dr~~~~~~~l~~~~~~g~gi~~----~~~~~e~v~--~l~~a 67 (482)
T 2pgd_A 4 DIALIGLAVMGQNLILNMN----------DHGFVVCAFNRTVSKVDDFLANEAKGTKVLG----AHSLEEMVS--KLKKP 67 (482)
T ss_dssp SEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSTHHHHHHHHTTTTTSSCEE----CSSHHHHHH--HBCSS
T ss_pred eEEEEChHHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHhccccCCCeEE----eCCHHHHHh--hccCC
Confidence 6899999999999999998 789999999999999998876 33221 23333 222 23589
Q ss_pred cEEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEec-Ch-----hhHHHHHHCCCCeEEcC
Q 003861 607 KAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQ-DM-----MHLLDLKKAGATDAILE 659 (791)
Q Consensus 607 ~~viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~-~~-----~~~~~L~~~Gad~Vi~p 659 (791)
|.|+++++++...-.++..+.. +.|+ .+++-.. .. +-.+.+.+.|+..+-.|
T Consensus 68 DvVilaVp~~~~v~~vl~~l~~~l~~g-~iII~~s~~~~~~~~~l~~~l~~~g~~~v~~p 126 (482)
T 2pgd_A 68 RRIILLVKAGQAVDNFIEKLVPLLDIG-DIIIDGGNSEYRDTMRRCRDLKDKGILFVGSG 126 (482)
T ss_dssp CEEEECSCTTHHHHHHHHHHHHHCCTT-CEEEECSCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCChHHHHHHHHHHHhhcCCC-CEEEECCCCCHHHHHHHHHHHHHcCCeEeCCC
Confidence 9999999885333333333433 4455 3444442 22 12334555676655444
No 106
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=95.30 E-value=0.0072 Score=63.11 Aligned_cols=102 Identities=17% Similarity=0.207 Sum_probs=63.9
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCC--C-E-EEccCCCHHHHHhcCCCCCcE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGF--P-I-LYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~--~-~-v~GD~t~~~~L~~agi~~a~~ 608 (791)
++.|+|.|.+|..++..|. +.|++|+++|.++++.+.+...+. . . .....++++.+ +++|.
T Consensus 2 ~i~iiG~G~~G~~~a~~l~----------~~g~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-----~~~d~ 66 (291)
T 1ks9_A 2 KITVLGCGALGQLWLTALC----------KQGHEVQGWLRVPQPYCSVNLVETDGSIFNESLTANDPDFL-----ATSDL 66 (291)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCCSEEEEEEECTTSCEEEEEEEESCHHHH-----HTCSE
T ss_pred eEEEECcCHHHHHHHHHHH----------hCCCCEEEEEcCccceeeEEEEcCCCceeeeeeeecCcccc-----CCCCE
Confidence 4789999999999999998 789999999999887654433221 0 0 11112344443 46899
Q ss_pred EEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEecChhhHHHHHH
Q 003861 609 VMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMMHLLDLKK 650 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~~~~~~~~L~~ 650 (791)
+++++.++.. ..+...++. +.|+..++.-.+.....+.+.+
T Consensus 67 vi~~v~~~~~-~~v~~~l~~~l~~~~~vv~~~~g~~~~~~l~~ 108 (291)
T 1ks9_A 67 LLVTLKAWQV-SDAVKSLASTLPVTTPILLIHNGMGTIEELQN 108 (291)
T ss_dssp EEECSCGGGH-HHHHHHHHTTSCTTSCEEEECSSSCTTGGGTT
T ss_pred EEEEecHHhH-HHHHHHHHhhCCCCCEEEEecCCCCcHHHHHH
Confidence 9999988643 333333443 3445445555554444444443
No 107
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=95.27 E-value=0.012 Score=66.53 Aligned_cols=86 Identities=17% Similarity=0.269 Sum_probs=63.2
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.++|+|+|.+|+.+++.++ ..|.+|+++|.++++.+.+++.|..++ +.+ ++ ++++|.++
T Consensus 274 GktV~IiG~G~IG~~~A~~lk----------a~Ga~Viv~d~~~~~~~~A~~~Ga~~~-----~l~---e~-l~~aDvVi 334 (494)
T 3ce6_A 274 GKKVLICGYGDVGKGCAEAMK----------GQGARVSVTEIDPINALQAMMEGFDVV-----TVE---EA-IGDADIVV 334 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEEC-----CHH---HH-GGGCSEEE
T ss_pred cCEEEEEccCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCEEe-----cHH---HH-HhCCCEEE
Confidence 457999999999999999998 789999999999999888888887532 222 22 46899999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEE
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYA 637 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iia 637 (791)
.+++++. +.-...++.+.|+..++-
T Consensus 335 ~atgt~~--~i~~~~l~~mk~ggilvn 359 (494)
T 3ce6_A 335 TATGNKD--IIMLEHIKAMKDHAILGN 359 (494)
T ss_dssp ECSSSSC--SBCHHHHHHSCTTCEEEE
T ss_pred ECCCCHH--HHHHHHHHhcCCCcEEEE
Confidence 8887653 111244555666655443
No 108
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=95.26 E-value=0.049 Score=57.84 Aligned_cols=71 Identities=15% Similarity=0.265 Sum_probs=55.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCH-HHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~-~~L~~agi~~a~~vi 610 (791)
.++.|+|+|.+|..+++.|. +.|++|+++|.++++.+.+.+.|..+ .++. +.+ +++|.|+
T Consensus 31 ~~I~iIG~G~mG~~~a~~l~----------~~g~~V~~~~~~~~~~~~~~~~g~~~----~~~~~~~~-----~~~DvVi 91 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNLL----------KMGHTVTVWNRTAEKCDLFIQEGARL----GRTPAEVV-----STCDITF 91 (316)
T ss_dssp SCEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSGGGGHHHHHTTCEE----CSCHHHHH-----HHCSEEE
T ss_pred CeEEEEcccHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHHcCCEE----cCCHHHHH-----hcCCEEE
Confidence 57999999999999999998 78999999999999998888766542 1222 333 4689999
Q ss_pred EEeCCHHHHHH
Q 003861 611 IMYTDKKRTIE 621 (791)
Q Consensus 611 v~~~~d~~n~~ 621 (791)
++++++...-.
T Consensus 92 ~av~~~~~~~~ 102 (316)
T 2uyy_A 92 ACVSDPKAAKD 102 (316)
T ss_dssp ECCSSHHHHHH
T ss_pred EeCCCHHHHHH
Confidence 99997654333
No 109
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=95.25 E-value=0.031 Score=63.06 Aligned_cols=74 Identities=14% Similarity=0.120 Sum_probs=61.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCC-CCcEEEEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTV-GWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~-g~~vvvID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
++++|+|.|.+|+.+++.|. +. +.+|+++|.++++.+.+.+ .+...+..|.+|.+.++++ ++++|.|
T Consensus 24 k~VlIiGAGgiG~aia~~L~----------~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~-l~~~DvV 92 (467)
T 2axq_A 24 KNVLLLGSGFVAQPVIDTLA----------ANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKV-LADNDVV 92 (467)
T ss_dssp EEEEEECCSTTHHHHHHHHH----------TSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHH-HHTSSEE
T ss_pred CEEEEECChHHHHHHHHHHH----------hCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHH-HcCCCEE
Confidence 36999999999999999998 55 7899999999999887764 3666788999998877653 3579999
Q ss_pred EEEeCCH
Q 003861 610 MIMYTDK 616 (791)
Q Consensus 610 iv~~~~d 616 (791)
|.+++..
T Consensus 93 In~tp~~ 99 (467)
T 2axq_A 93 ISLIPYT 99 (467)
T ss_dssp EECSCGG
T ss_pred EECCchh
Confidence 9888864
No 110
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=95.24 E-value=0.048 Score=57.95 Aligned_cols=107 Identities=18% Similarity=0.166 Sum_probs=70.2
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEE--ccC--------CCHHHHHhc
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILY--GDA--------SRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~--GD~--------t~~~~L~~a 601 (791)
.++.|+|.|.+|..++..|. +.|++|++++.++ .+.+++.|..... |+. ++++ +
T Consensus 3 mkI~IiGaGaiG~~~a~~L~----------~~g~~V~~~~r~~--~~~i~~~g~~~~~~~g~~~~~~~~~~~~~~---~- 66 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQ----------RSGEDVHFLLRRD--YEAIAGNGLKVFSINGDFTLPHVKGYRAPE---E- 66 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHH----------HTSCCEEEECSTT--HHHHHHTCEEEEETTCCEEESCCCEESCHH---H-
T ss_pred CEEEEECcCHHHHHHHHHHH----------HCCCeEEEEEcCc--HHHHHhCCCEEEcCCCeEEEeeceeecCHH---H-
Confidence 36899999999999999998 7899999999987 3777777765443 111 2333 2
Q ss_pred CCCCCcEEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEecChhhHHHHHH-CCCCeE
Q 003861 602 GITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMMHLLDLKK-AGATDA 656 (791)
Q Consensus 602 gi~~a~~viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~~~~~~~~L~~-~Gad~V 656 (791)
++.+|.|++++...... .++..++. +.|+..|+.-++--++.+.+.+ .+.+.|
T Consensus 67 -~~~~D~vilavk~~~~~-~~l~~l~~~l~~~~~iv~l~nGi~~~~~l~~~~~~~~v 121 (312)
T 3hn2_A 67 -IGPMDLVLVGLKTFANS-RYEELIRPLVEEGTQILTLQNGLGNEEALATLFGAERI 121 (312)
T ss_dssp -HCCCSEEEECCCGGGGG-GHHHHHGGGCCTTCEEEECCSSSSHHHHHHHHTCGGGE
T ss_pred -cCCCCEEEEecCCCCcH-HHHHHHHhhcCCCCEEEEecCCCCcHHHHHHHCCCCcE
Confidence 35899999998764322 23344444 3555556666666665666544 354433
No 111
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=95.22 E-value=0.014 Score=61.84 Aligned_cols=101 Identities=14% Similarity=0.181 Sum_probs=66.6
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCC-----C-CcEEEEcCChhhHHHHHh-cCCCEEE--cc-------C-CCH
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTV-----G-WPFVAFDLNPSVVKESRK-LGFPILY--GD-------A-SRP 595 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~-----g-~~vvvID~d~~~v~~~~~-~~~~~v~--GD-------~-t~~ 595 (791)
++.|+|.|.+|..++..|. +. | ++|+++|. +++.+.+++ .|..+.. |+ + ++.
T Consensus 10 ~I~iiG~G~mG~~~a~~L~----------~~~~~~~g~~~V~~~~r-~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 78 (317)
T 2qyt_A 10 KIAVFGLGGVGGYYGAMLA----------LRAAATDGLLEVSWIAR-GAHLEAIRAAGGLRVVTPSRDFLARPTCVTDNP 78 (317)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HHHHHTTSSEEEEEECC-HHHHHHHHHHTSEEEECSSCEEEECCSEEESCH
T ss_pred EEEEECcCHHHHHHHHHHH----------hCccccCCCCCEEEEEc-HHHHHHHHhcCCeEEEeCCCCeEEecceEecCc
Confidence 6999999999999999998 66 8 99999998 888888887 6765432 11 0 233
Q ss_pred HHHHhcCCCCCcEEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEecChhhHHHHHH
Q 003861 596 AVLLSAGITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMMHLLDLKK 650 (791)
Q Consensus 596 ~~L~~agi~~a~~viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~~~~~~~~L~~ 650 (791)
+. ++++|.+++++.++.. ..++..++. +.|+..|+.-.+...+.+.+++
T Consensus 79 ~~-----~~~~D~vil~vk~~~~-~~v~~~i~~~l~~~~~iv~~~nG~~~~~~l~~ 128 (317)
T 2qyt_A 79 AE-----VGTVDYILFCTKDYDM-ERGVAEIRPMIGQNTKILPLLNGADIAERMRT 128 (317)
T ss_dssp HH-----HCCEEEEEECCSSSCH-HHHHHHHGGGEEEEEEEEECSCSSSHHHHHTT
T ss_pred cc-----cCCCCEEEEecCcccH-HHHHHHHHhhcCCCCEEEEccCCCCcHHHHHH
Confidence 32 3689999999987643 223333333 2333334444555555455543
No 112
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=95.21 E-value=0.013 Score=64.95 Aligned_cols=84 Identities=14% Similarity=0.264 Sum_probs=60.1
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.++|+|+|++|+.+|+.++ ..|.+|++.|.||.+...+...|+.++. -++.+ +++|.++
T Consensus 247 GKTVgVIG~G~IGr~vA~~lr----------afGa~Viv~d~dp~~a~~A~~~G~~vv~----LeElL-----~~ADIVv 307 (464)
T 3n58_A 247 GKVAVVCGYGDVGKGSAQSLA----------GAGARVKVTEVDPICALQAAMDGFEVVT----LDDAA-----STADIVV 307 (464)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHHTTCEECC----HHHHG-----GGCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHH----------HCCCEEEEEeCCcchhhHHHhcCceecc----HHHHH-----hhCCEEE
Confidence 357999999999999999998 8999999999999887666667776531 13333 4789887
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcE
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPI 635 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~i 635 (791)
.++++ .++.-....+.+.|+..+
T Consensus 308 ~atgt--~~lI~~e~l~~MK~GAIL 330 (464)
T 3n58_A 308 TTTGN--KDVITIDHMRKMKDMCIV 330 (464)
T ss_dssp ECCSS--SSSBCHHHHHHSCTTEEE
T ss_pred ECCCC--ccccCHHHHhcCCCCeEE
Confidence 76654 233334556666665443
No 113
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=95.17 E-value=0.016 Score=63.30 Aligned_cols=74 Identities=16% Similarity=0.168 Sum_probs=59.3
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
.++++|+|.|.+|+.+++.+. ..|.+|+++|.++++.+.+++ .+.. ++.|.++.+.++++ ++++|.+
T Consensus 166 ~~~V~ViGaG~iG~~~a~~l~----------~~Ga~V~~~d~~~~~~~~~~~~~g~~-~~~~~~~~~~l~~~-~~~~DvV 233 (369)
T 2eez_A 166 PASVVILGGGTVGTNAAKIAL----------GMGAQVTILDVNHKRLQYLDDVFGGR-VITLTATEANIKKS-VQHADLL 233 (369)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHTTTS-EEEEECCHHHHHHH-HHHCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCEEEEEECCHHHHHHHHHhcCce-EEEecCCHHHHHHH-HhCCCEE
Confidence 367999999999999999998 899999999999999887765 4544 56677777766654 4689999
Q ss_pred EEEeCCH
Q 003861 610 MIMYTDK 616 (791)
Q Consensus 610 iv~~~~d 616 (791)
|.+++.+
T Consensus 234 i~~~g~~ 240 (369)
T 2eez_A 234 IGAVLVP 240 (369)
T ss_dssp EECCC--
T ss_pred EECCCCC
Confidence 8888754
No 114
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=95.14 E-value=0.0096 Score=59.32 Aligned_cols=68 Identities=16% Similarity=0.134 Sum_probs=49.7
Q ss_pred CEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-C-----CCEEEccCCCHHHHHhcCCCC
Q 003861 533 PVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-G-----FPILYGDASRPAVLLSAGITS 605 (791)
Q Consensus 533 ~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-~-----~~~v~GD~t~~~~L~~agi~~ 605 (791)
++.|+| .|.+|+.+++.|. +.|++|+++|.++++.+++.+. + ..+.. .+..+.+ ++
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-----~~ 64 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLA----------TLGHEIVVGSRREEKAEAKAAEYRRIAGDASITG--MKNEDAA-----EA 64 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------TTTCEEEEEESSHHHHHHHHHHHHHHHSSCCEEE--EEHHHHH-----HH
T ss_pred eEEEEcCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhccccccCCCCh--hhHHHHH-----hc
Confidence 478999 9999999999998 7899999999999988776543 2 11211 1112222 46
Q ss_pred CcEEEEEeCCHH
Q 003861 606 PKAVMIMYTDKK 617 (791)
Q Consensus 606 a~~viv~~~~d~ 617 (791)
+|.++.+++.+.
T Consensus 65 ~D~Vi~~~~~~~ 76 (212)
T 1jay_A 65 CDIAVLTIPWEH 76 (212)
T ss_dssp CSEEEECSCHHH
T ss_pred CCEEEEeCChhh
Confidence 899999988654
No 115
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=95.13 E-value=0.12 Score=55.49 Aligned_cols=139 Identities=16% Similarity=0.142 Sum_probs=87.4
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCC--CcEEEEcCChh--hHHHHHhcCCC-EEEccCCCHHHHHhcCCCC
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPS--VVKESRKLGFP-ILYGDASRPAVLLSAGITS 605 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g--~~vvvID~d~~--~v~~~~~~~~~-~v~GD~t~~~~L~~agi~~ 605 (791)
.++.|+| .|.+|..++..|. ..| .+++++|.|++ .+.++.+...+ -+.+ .++.+.++++ +++
T Consensus 9 mKI~ViGAaG~VG~~la~~L~----------~~g~~~ev~l~Di~~~~~~~~dL~~~~~~~~v~~-~~~t~d~~~a-l~g 76 (326)
T 1smk_A 9 FKVAILGAAGGIGQPLAMLMK----------MNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRG-FLGQQQLEAA-LTG 76 (326)
T ss_dssp EEEEEETTTSTTHHHHHHHHH----------HCTTEEEEEEEESSSHHHHHHHHHTSCSSCEEEE-EESHHHHHHH-HTT
T ss_pred CEEEEECCCChHHHHHHHHHH----------hCCCCCEEEEEeCCCcHhHHHHhhcccccceEEE-EeCCCCHHHH-cCC
Confidence 3699999 7999999999997 566 78999998887 22334443332 2333 1122223322 468
Q ss_pred CcEEEEEeCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH------HHHHH---CCCCeEEcCcH
Q 003861 606 PKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL------LDLKK---AGATDAILENA 661 (791)
Q Consensus 606 a~~viv~~~~---------d--~~n~~----~~~~ar~l~p~~~iiara~~~~~~------~~L~~---~Gad~Vi~p~~ 661 (791)
+|.|+.+.+. | ..|.. ++..+++.+|+..++. ..|+-+. +.+++ ...++|+--..
T Consensus 77 aDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~~p~~~viv-~SNPv~~~~~~~t~~~~~~~~~p~~rviG~~~ 155 (326)
T 1smk_A 77 MDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRAIVNL-ISNPVNSTVPIAAEVFKKAGTYDPKRLLGVTM 155 (326)
T ss_dssp CSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHHCTTSEEEE-CCSSHHHHHHHHHHHHHHHTCCCTTSEEECCH
T ss_pred CCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-ECCchHHHHHHHHHHHHHccCCCcccEEEEee
Confidence 9999888742 1 23433 4556677788866665 5677666 23344 33467877765
Q ss_pred HHHHHHHHHHHhhcCCChHHHH
Q 003861 662 ETSLQLGSKLLKGFGVMSDDVT 683 (791)
Q Consensus 662 ~~~~~la~~~l~~l~~~~~~~~ 683 (791)
+-..++-..+-+.+|+++..++
T Consensus 156 Ld~~r~~~~la~~l~v~~~~v~ 177 (326)
T 1smk_A 156 LDVVRANTFVAEVLGLDPRDVD 177 (326)
T ss_dssp HHHHHHHHHHHHHHTCCGGGCB
T ss_pred hHHHHHHHHHHHHhCcChhheE
Confidence 5466666677777788775543
No 116
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=95.13 E-value=0.076 Score=60.06 Aligned_cols=92 Identities=22% Similarity=0.235 Sum_probs=61.6
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-CC----CEEEccCCCH-HHHHhcCCCCC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GF----PILYGDASRP-AVLLSAGITSP 606 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-~~----~~v~GD~t~~-~~L~~agi~~a 606 (791)
++.|+|.|.+|..++..|. +.|++|.+.|.++++++.+.+. |. .-+.. .++. +..+ +++++
T Consensus 3 kIgVIG~G~mG~~lA~~La----------~~G~~V~v~dr~~~~~~~l~~~~g~~~~~~~i~~-~~~~~e~v~--~l~~a 69 (478)
T 1pgj_A 3 DVGVVGLGVMGANLALNIA----------EKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKA-FETMEAFAA--SLKKP 69 (478)
T ss_dssp SEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEE-CSCHHHHHH--HBCSS
T ss_pred EEEEEChHHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhcCCCCCCCCeEE-ECCHHHHHh--cccCC
Confidence 5889999999999999998 7899999999999999888764 41 10121 2333 3333 23579
Q ss_pred cEEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEE
Q 003861 607 KAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYAR 638 (791)
Q Consensus 607 ~~viv~~~~d~~n~~~~~~ar~-l~p~~~iiar 638 (791)
|.|+++++++...-.++..++. +.|+ .+++-
T Consensus 70 DvVilaVp~~~~v~~vl~~l~~~l~~g-~iIId 101 (478)
T 1pgj_A 70 RKALILVQAGAATDSTIEQLKKVFEKG-DILVD 101 (478)
T ss_dssp CEEEECCCCSHHHHHHHHHHHHHCCTT-CEEEE
T ss_pred CEEEEecCChHHHHHHHHHHHhhCCCC-CEEEE
Confidence 9999999885332333333333 4455 34443
No 117
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=95.11 E-value=0.067 Score=54.73 Aligned_cols=70 Identities=13% Similarity=0.157 Sum_probs=50.8
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhh--------------HHHHHhc-CCCEEEccCCC
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV--------------VKESRKL-GFPILYGDASR 594 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~--------------v~~~~~~-~~~~v~GD~t~ 594 (791)
...++.|+|.|.+|..+++.|. +.|++|++.|.++++ .+++.+. +... .. +.
T Consensus 18 ~~~kIgiIG~G~mG~alA~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~ 84 (245)
T 3dtt_A 18 QGMKIAVLGTGTVGRTMAGALA----------DLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWLPEHPHVH-LA--AF 84 (245)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHTCC-------CCHHHHGGGSTTCE-EE--EH
T ss_pred CCCeEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHHhhcCcee-cc--CH
Confidence 3567999999999999999998 789999999999997 4554432 2221 11 22
Q ss_pred HHHHHhcCCCCCcEEEEEeCCHH
Q 003861 595 PAVLLSAGITSPKAVMIMYTDKK 617 (791)
Q Consensus 595 ~~~L~~agi~~a~~viv~~~~d~ 617 (791)
.+.+ +++|.|+++++++.
T Consensus 85 ~e~~-----~~aDvVilavp~~~ 102 (245)
T 3dtt_A 85 ADVA-----AGAELVVNATEGAS 102 (245)
T ss_dssp HHHH-----HHCSEEEECSCGGG
T ss_pred HHHH-----hcCCEEEEccCcHH
Confidence 3333 46899999998764
No 118
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=95.07 E-value=0.072 Score=56.51 Aligned_cols=132 Identities=16% Similarity=0.182 Sum_probs=82.3
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHHH-HHh--cCC-----CEEEccCCCHHHHHhcC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKE-SRK--LGF-----PILYGDASRPAVLLSAG 602 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~~-~~~--~~~-----~~v~GD~t~~~~L~~ag 602 (791)
++.|+|.|.+|..++..|. ..|+ +++++|.|+++.+. ..+ ... .-+.. ++. ..
T Consensus 2 kI~VIGaG~vG~~la~~la----------~~g~~~eV~L~D~~~~~~~~~~~~l~~~~~~~~~~~i~~--~~~-----~a 64 (304)
T 2v6b_A 2 KVGVVGTGFVGSTAAFALV----------LRGSCSELVLVDRDEDRAQAEAEDIAHAAPVSHGTRVWH--GGH-----SE 64 (304)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCCSEEEEECSSHHHHHHHHHHHTTSCCTTSCCEEEE--ECG-----GG
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEeCCHHHHHHHHHhhhhhhhhcCCeEEEE--CCH-----HH
Confidence 5889999999999999998 6777 99999999987653 222 111 11222 222 23
Q ss_pred CCCCcEEEEEeCCHH-----------HHHHH----HHHHHHhCCCCcEEEEecChhhHH--HH-HHCCCCeEEcC-cHHH
Q 003861 603 ITSPKAVMIMYTDKK-----------RTIEA----VQRLRLAFPAIPIYARAQDMMHLL--DL-KKAGATDAILE-NAET 663 (791)
Q Consensus 603 i~~a~~viv~~~~d~-----------~n~~~----~~~ar~l~p~~~iiara~~~~~~~--~L-~~~Gad~Vi~p-~~~~ 663 (791)
+++||.||++.+... .|+.+ +..+++..|+..++. +.|+.+.. .+ +....++|+-- ..+-
T Consensus 65 ~~~aDvVIi~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~-~tNP~~~~~~~~~~~~~~~rviG~gt~Ld 143 (304)
T 2v6b_A 65 LADAQVVILTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLV-TSNPVDLLTDLATQLAPGQPVIGSGTVLD 143 (304)
T ss_dssp GTTCSEEEECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEE-CSSSHHHHHHHHHHHSCSSCEEECTTHHH
T ss_pred hCCCCEEEEcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEE-ecCchHHHHHHHHHhCChhcEEeCCcCch
Confidence 689999999885432 45443 455566678766555 66666542 23 33466677754 4444
Q ss_pred HHHHHHHHHhhcCCChHHH
Q 003861 664 SLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 664 ~~~la~~~l~~l~~~~~~~ 682 (791)
..++...+-+.+|+++..+
T Consensus 144 ~~r~~~~la~~l~v~~~~v 162 (304)
T 2v6b_A 144 SARFRHLMAQHAGVDGTHA 162 (304)
T ss_dssp HHHHHHHHHHHHTSCGGGE
T ss_pred HHHHHHHHHHHhCcCHHHc
Confidence 4566666666677776443
No 119
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=95.05 E-value=0.019 Score=59.72 Aligned_cols=69 Identities=23% Similarity=0.369 Sum_probs=58.1
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
.+++|.|.|.+|+.+++.|. +.|++|++++.+++.. ..+..++.+|.+|++.++++--+++|+||-
T Consensus 4 ~~ilVtGaG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~~d~vih 69 (286)
T 3gpi_A 4 SKILIAGCGDLGLELARRLT----------AQGHEVTGLRRSAQPM----PAGVQTLIADVTRPDTLASIVHLRPEILVY 69 (286)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HTTCCEEEEECTTSCC----CTTCCEEECCTTCGGGCTTGGGGCCSEEEE
T ss_pred CcEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCcccc----ccCCceEEccCCChHHHHHhhcCCCCEEEE
Confidence 47999999999999999998 7899999999988763 367899999999999888764345998887
Q ss_pred EeC
Q 003861 612 MYT 614 (791)
Q Consensus 612 ~~~ 614 (791)
+..
T Consensus 70 ~a~ 72 (286)
T 3gpi_A 70 CVA 72 (286)
T ss_dssp CHH
T ss_pred eCC
Confidence 653
No 120
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=95.05 E-value=0.05 Score=56.97 Aligned_cols=89 Identities=17% Similarity=0.183 Sum_probs=60.8
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCC--CCcEEEEcCChhhHHHHHhcCCC-EEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLGFP-ILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~--g~~vvvID~d~~~v~~~~~~~~~-~v~GD~t~~~~L~~agi~~a~~ 608 (791)
.++.|+|+|.+|..+++.|. +. +.+|++.|.++++.+.+.+.|.. ....|.. +. ++++|.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~----------~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~--~~-----~~~aDv 69 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIK----------RDHPHYKIVGYNRSDRSRDIALERGIVDEATADFK--VF-----AALADV 69 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTT--TT-----GGGCSE
T ss_pred ceEEEEeeCHHHHHHHHHHH----------hCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHH--Hh-----hcCCCE
Confidence 46999999999999999997 44 68999999999999888776653 2222221 12 357899
Q ss_pred EEEEeCCHHHHHHHHHHHHH--hCCCCcEEEEe
Q 003861 609 VMIMYTDKKRTIEAVQRLRL--AFPAIPIYARA 639 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~--l~p~~~iiara 639 (791)
|+++++.+.. ..+...++. +.++ .+++-.
T Consensus 70 Vilavp~~~~-~~v~~~l~~~~l~~~-~ivi~~ 100 (290)
T 3b1f_A 70 IILAVPIKKT-IDFIKILADLDLKED-VIITDA 100 (290)
T ss_dssp EEECSCHHHH-HHHHHHHHTSCCCTT-CEEECC
T ss_pred EEEcCCHHHH-HHHHHHHHhcCCCCC-CEEEEC
Confidence 9999987543 333334443 3344 355543
No 121
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=95.04 E-value=0.084 Score=59.62 Aligned_cols=94 Identities=17% Similarity=0.168 Sum_probs=62.5
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcC--CCEEEccCCCH-HHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLG--FPILYGDASRP-AVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~--~~~v~GD~t~~-~~L~~agi~~a~~ 608 (791)
.++.|+|+|.+|+.+++.|. +.|++|.+.|.++++++.+.+.. ..+ .. .++. +..+ +.+++|.
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~----------~~G~~V~v~dr~~~~~~~l~~~~~~~gi-~~-~~s~~e~v~--~l~~aDv 71 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVE----------SRGYTVAIYNRTTSKTEEVFKEHQDKNL-VF-TKTLEEFVG--SLEKPRR 71 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSHHHHHHHHHHTTTSCE-EE-CSSHHHHHH--TBCSSCE
T ss_pred CcEEEEeeHHHHHHHHHHHH----------hCCCEEEEEcCCHHHHHHHHHhCcCCCe-EE-eCCHHHHHh--hccCCCE
Confidence 47999999999999999998 78999999999999998887641 012 11 2333 3333 3457999
Q ss_pred EEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEec
Q 003861 609 VMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQ 640 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~ 640 (791)
|+++++++...-.+...+.. +.|+ .+++-..
T Consensus 72 Vilavp~~~~v~~vl~~l~~~l~~g-~iiId~s 103 (474)
T 2iz1_A 72 IMLMVQAGAATDATIKSLLPLLDIG-DILIDGG 103 (474)
T ss_dssp EEECCCTTHHHHHHHHHHGGGCCTT-CEEEECS
T ss_pred EEEEccCchHHHHHHHHHHhhCCCC-CEEEECC
Confidence 99999885433333333333 3344 3444333
No 122
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=95.02 E-value=0.055 Score=54.68 Aligned_cols=73 Identities=18% Similarity=0.094 Sum_probs=59.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh--cCCCEEEccCCCHHHHHhc--CCCCC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--LGFPILYGDASRPAVLLSA--GITSP 606 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~--~~~~~v~GD~t~~~~L~~a--gi~~a 606 (791)
++++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ .+.+++.+|.+|++.++++ ...+.
T Consensus 8 ~~vlVTGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALH----------ASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPV 77 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCC
Confidence 46788877 899999999998 789999999999988776654 3677889999999988765 44568
Q ss_pred cEEEEEeC
Q 003861 607 KAVMIMYT 614 (791)
Q Consensus 607 ~~viv~~~ 614 (791)
|.+|-..+
T Consensus 78 d~vi~~Ag 85 (244)
T 1cyd_A 78 DLLVNNAA 85 (244)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 88877654
No 123
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=95.01 E-value=0.046 Score=58.15 Aligned_cols=68 Identities=22% Similarity=0.293 Sum_probs=52.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCC--hhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLN--PSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d--~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
.++.|+|+|.+|..+++.|. +.|+ +|++.|.+ ++..+.+.+.|.... .+..+.+ +++|.
T Consensus 25 ~~I~iIG~G~mG~~~A~~L~----------~~G~~~V~~~dr~~~~~~~~~~~~~g~~~~---~~~~e~~-----~~aDv 86 (312)
T 3qsg_A 25 MKLGFIGFGEAASAIASGLR----------QAGAIDMAAYDAASAESWRPRAEELGVSCK---ASVAEVA-----GECDV 86 (312)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HHSCCEEEEECSSCHHHHHHHHHHTTCEEC---SCHHHHH-----HHCSE
T ss_pred CEEEEECccHHHHHHHHHHH----------HCCCCeEEEEcCCCCHHHHHHHHHCCCEEe---CCHHHHH-----hcCCE
Confidence 47999999999999999998 7899 99999997 588888887775431 1223334 35788
Q ss_pred EEEEeCCHH
Q 003861 609 VMIMYTDKK 617 (791)
Q Consensus 609 viv~~~~d~ 617 (791)
|+++++++.
T Consensus 87 Vi~~vp~~~ 95 (312)
T 3qsg_A 87 IFSLVTAQA 95 (312)
T ss_dssp EEECSCTTT
T ss_pred EEEecCchh
Confidence 888888764
No 124
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=95.01 E-value=0.2 Score=44.70 Aligned_cols=98 Identities=13% Similarity=0.141 Sum_probs=67.8
Q ss_pred CCCCcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC-HHHHHHHHHHHHHhCCCCcEE
Q 003861 562 TVGWPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIY 636 (791)
Q Consensus 562 ~~g~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~-d~~n~~~~~~ar~l~p~~~ii 636 (791)
..+.+++++|.|+...+.+ ++.|+.+... .+-.+.++.+.-.+.|.+++-..- +......+..+|+.+|+++++
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (130)
T 3eod_A 5 LVGKQILIVEDEQVFRSLLDSWFSSLGATTVLA-ADGVDALELLGGFTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVL 83 (130)
T ss_dssp TTTCEEEEECSCHHHHHHHHHHHHHTTCEEEEE-SCHHHHHHHHTTCCCSEEEECCC-----CHHHHHHHHHTTCCCCEE
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHhCCceEEEe-CCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEE
Confidence 4567899999998865443 4567776653 344567777777789988777653 345577888899999998977
Q ss_pred EEecChh--hHHHHHHCCCCeEEcCc
Q 003861 637 ARAQDMM--HLLDLKKAGATDAILEN 660 (791)
Q Consensus 637 ara~~~~--~~~~L~~~Gad~Vi~p~ 660 (791)
+-..+.+ ......+.|++.++.-.
T Consensus 84 ~~t~~~~~~~~~~~~~~g~~~~l~KP 109 (130)
T 3eod_A 84 VISATENMADIAKALRLGVEDVLLKP 109 (130)
T ss_dssp EEECCCCHHHHHHHHHHCCSEEEESC
T ss_pred EEEcCCCHHHHHHHHHcCCCEEEeCC
Confidence 7665443 44667889999876544
No 125
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.98 E-value=0.045 Score=61.18 Aligned_cols=70 Identities=20% Similarity=0.297 Sum_probs=51.6
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEE-------------c---cCCCHH
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILY-------------G---DASRPA 596 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~-------------G---D~t~~~ 596 (791)
++.|+|.|.+|..++..|. +.|++|+++|.|+++++.+.+.+.+... | ..+|.+
T Consensus 2 kI~VIG~G~vG~~~A~~la----------~~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~g~l~~t~~~~ 71 (436)
T 1mv8_A 2 RISIFGLGYVGAVCAGCLS----------ARGHEVIGVDVSSTKIDLINQGKSPIVEPGLEALLQQGRQTGRLSGTTDFK 71 (436)
T ss_dssp EEEEECCSTTHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEESCHH
T ss_pred EEEEECCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHhCCCCCcCCCCHHHHHHhhcccCceEEeCCHH
Confidence 4789999999999999998 7899999999999999988764433210 0 012222
Q ss_pred HHHhcCCCCCcEEEEEeCCH
Q 003861 597 VLLSAGITSPKAVMIMYTDK 616 (791)
Q Consensus 597 ~L~~agi~~a~~viv~~~~d 616 (791)
- -++++|.++++++.+
T Consensus 72 ~----~~~~aDvviiaVptp 87 (436)
T 1mv8_A 72 K----AVLDSDVSFICVGTP 87 (436)
T ss_dssp H----HHHTCSEEEECCCCC
T ss_pred H----HhccCCEEEEEcCCC
Confidence 1 134789999998764
No 126
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=94.96 E-value=0.0098 Score=60.17 Aligned_cols=73 Identities=16% Similarity=0.111 Sum_probs=59.7
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
++++|.| .|.+|+.+++.|. +.|+ +|++++.+++..+.....+..++.+|.+|++.++++ ++++|+
T Consensus 19 ~~vlVtGasg~iG~~l~~~L~----------~~G~~~~V~~~~r~~~~~~~~~~~~~~~~~~D~~d~~~~~~~-~~~~d~ 87 (242)
T 2bka_A 19 KSVFILGASGETGRVLLKEIL----------EQGLFSKVTLIGRRKLTFDEEAYKNVNQEVVDFEKLDDYASA-FQGHDV 87 (242)
T ss_dssp CEEEEECTTSHHHHHHHHHHH----------HHTCCSEEEEEESSCCCCCSGGGGGCEEEECCGGGGGGGGGG-GSSCSE
T ss_pred CeEEEECCCcHHHHHHHHHHH----------cCCCCCEEEEEEcCCCCccccccCCceEEecCcCCHHHHHHH-hcCCCE
Confidence 4688888 5999999999998 7899 999999988765444445688899999999988765 457898
Q ss_pred EEEEeCC
Q 003861 609 VMIMYTD 615 (791)
Q Consensus 609 viv~~~~ 615 (791)
+|-+.+.
T Consensus 88 vi~~ag~ 94 (242)
T 2bka_A 88 GFCCLGT 94 (242)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 8887764
No 127
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=94.95 E-value=0.029 Score=62.23 Aligned_cols=65 Identities=17% Similarity=0.311 Sum_probs=49.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.++++|+|+|++|+.+++.|+ ..|.+|++.|.|+.+...+...|+.+. +-++. ++++|.++
T Consensus 211 GktVgIiG~G~IG~~vA~~Lk----------a~Ga~Viv~D~~p~~a~~A~~~G~~~~----sL~ea-----l~~ADVVi 271 (436)
T 3h9u_A 211 GKTACVCGYGDVGKGCAAALR----------GFGARVVVTEVDPINALQAAMEGYQVL----LVEDV-----VEEAHIFV 271 (436)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEEC----CHHHH-----TTTCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------HCCCEEEEECCChhhhHHHHHhCCeec----CHHHH-----HhhCCEEE
Confidence 357999999999999999998 889999999999988777777776542 11222 34688776
Q ss_pred EEeC
Q 003861 611 IMYT 614 (791)
Q Consensus 611 v~~~ 614 (791)
.+++
T Consensus 272 lt~g 275 (436)
T 3h9u_A 272 TTTG 275 (436)
T ss_dssp ECSS
T ss_pred ECCC
Confidence 5544
No 128
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=94.93 E-value=0.083 Score=56.41 Aligned_cols=87 Identities=15% Similarity=0.179 Sum_probs=59.7
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCC----CcEEEEcCChh--hHHHHHhcCCCEEEccCCCHHHHHhcCCCCC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVG----WPFVAFDLNPS--VVKESRKLGFPILYGDASRPAVLLSAGITSP 606 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g----~~vvvID~d~~--~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a 606 (791)
++.|+|.|.+|..++..|. +.| ++|++.|.+++ +.+.+++.|..+. . +..+.. +++
T Consensus 24 kI~iIG~G~mG~ala~~L~----------~~G~~~~~~V~v~~r~~~~~~~~~l~~~G~~~~-~--~~~e~~-----~~a 85 (322)
T 2izz_A 24 SVGFIGAGQLAFALAKGFT----------AAGVLAAHKIMASSPDMDLATVSALRKMGVKLT-P--HNKETV-----QHS 85 (322)
T ss_dssp CEEEESCSHHHHHHHHHHH----------HTTSSCGGGEEEECSCTTSHHHHHHHHHTCEEE-S--CHHHHH-----HHC
T ss_pred EEEEECCCHHHHHHHHHHH----------HCCCCCcceEEEECCCccHHHHHHHHHcCCEEe-C--ChHHHh-----ccC
Confidence 6999999999999999998 677 89999999986 7888877776532 2 223333 368
Q ss_pred cEEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEe
Q 003861 607 KAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARA 639 (791)
Q Consensus 607 ~~viv~~~~d~~n~~~~~~ar~-l~p~~~iiara 639 (791)
|.|++++..+ .-..+...++. +.|+ .+++..
T Consensus 86 DvVilav~~~-~~~~vl~~l~~~l~~~-~ivvs~ 117 (322)
T 2izz_A 86 DVLFLAVKPH-IIPFILDEIGADIEDR-HIVVSC 117 (322)
T ss_dssp SEEEECSCGG-GHHHHHHHHGGGCCTT-CEEEEC
T ss_pred CEEEEEeCHH-HHHHHHHHHHhhcCCC-CEEEEe
Confidence 9999998853 33333333433 2344 455544
No 129
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=94.93 E-value=0.077 Score=58.61 Aligned_cols=106 Identities=16% Similarity=0.154 Sum_probs=67.7
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEc--------------cCCCH-HH
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYG--------------DASRP-AV 597 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~G--------------D~t~~-~~ 597 (791)
++.|+|.|.+|..++..|. + |++|+++|.|+++++.+.+.+.++..- -.+++ +.
T Consensus 2 kI~VIG~G~vG~~~A~~La----------~-G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~~ 70 (402)
T 1dlj_A 2 KIAVAGSGYVGLSLGVLLS----------L-QNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKSKQLSIKATLDSKAA 70 (402)
T ss_dssp EEEEECCSHHHHHHHHHHT----------T-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHHHH
T ss_pred EEEEECCCHHHHHHHHHHh----------C-CCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHhccCcEEEeCCHHHH
Confidence 4789999999999999997 7 999999999999999988766532110 01222 22
Q ss_pred HHhcCCCCCcEEEEEeCCHH----------HHHHHHHHHHHhCCCCcEEE-EecChhhHHHH-HHCCCC
Q 003861 598 LLSAGITSPKAVMIMYTDKK----------RTIEAVQRLRLAFPAIPIYA-RAQDMMHLLDL-KKAGAT 654 (791)
Q Consensus 598 L~~agi~~a~~viv~~~~d~----------~n~~~~~~ar~l~p~~~iia-ra~~~~~~~~L-~~~Gad 654 (791)
+ +++|.++++++.+. ....++..+.++.|+.-|+- ..+.....+.+ +..+.+
T Consensus 71 ~-----~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~l~~~~iVV~~ST~~~g~~~~l~~~~~~~ 134 (402)
T 1dlj_A 71 Y-----KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLSVNSHATLIIKSTIPIGFITEMRQKFQTD 134 (402)
T ss_dssp H-----HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHHHCSSCEEEECSCCCTTHHHHHHHHTTCS
T ss_pred h-----cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHhhCCCCEEEEeCCCCccHHHHHHHHhCCC
Confidence 3 36899999988752 12333333333666643443 34444444444 344443
No 130
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=94.79 E-value=0.06 Score=57.05 Aligned_cols=73 Identities=15% Similarity=0.151 Sum_probs=57.8
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEE-EccCCCHHHHHhc
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPIL-YGDASRPAVLLSA 601 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v-~GD~t~~~~L~~a 601 (791)
.++++|.|. |.+|+.+++.|. +.|++|++++.+++..+.+.+ .+..++ .+|.+|++.++++
T Consensus 11 ~~~vlVTGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~ 80 (342)
T 1y1p_A 11 GSLVLVTGANGFVASHVVEQLL----------EHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEV 80 (342)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTT
T ss_pred CCEEEEECCccHHHHHHHHHHH----------HCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHH
Confidence 346899988 999999999998 789999999999887654432 345667 7999999988765
Q ss_pred CCCCCcEEEEEeC
Q 003861 602 GITSPKAVMIMYT 614 (791)
Q Consensus 602 gi~~a~~viv~~~ 614 (791)
++++|+||-+..
T Consensus 81 -~~~~d~vih~A~ 92 (342)
T 1y1p_A 81 -IKGAAGVAHIAS 92 (342)
T ss_dssp -TTTCSEEEECCC
T ss_pred -HcCCCEEEEeCC
Confidence 457898876653
No 131
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=94.78 E-value=0.029 Score=63.01 Aligned_cols=72 Identities=15% Similarity=0.316 Sum_probs=51.8
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHH-------------
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLL------------- 599 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~------------- 599 (791)
++.|+|.|.+|..++..|. +.|++|+++|.|+++++.+.+ +...++ ++.-++.++
T Consensus 4 kI~VIG~G~vG~~lA~~La----------~~G~~V~~~D~~~~~v~~l~~-g~~~i~-e~gl~~~l~~~~~~~~l~~t~d 71 (450)
T 3gg2_A 4 DIAVVGIGYVGLVSATCFA----------ELGANVRCIDTDRNKIEQLNS-GTIPIY-EPGLEKMIARNVKAGRLRFGTE 71 (450)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHH-TCSCCC-STTHHHHHHHHHHTTSEEEESC
T ss_pred EEEEECcCHHHHHHHHHHH----------hcCCEEEEEECCHHHHHHHHc-CCCccc-CCCHHHHHHhhcccCcEEEECC
Confidence 6899999999999999998 789999999999999998876 322221 111111110
Q ss_pred -hcCCCCCcEEEEEeCCH
Q 003861 600 -SAGITSPKAVMIMYTDK 616 (791)
Q Consensus 600 -~agi~~a~~viv~~~~d 616 (791)
+.-+++||.++++++.+
T Consensus 72 ~~ea~~~aDvViiaVptp 89 (450)
T 3gg2_A 72 IEQAVPEADIIFIAVGTP 89 (450)
T ss_dssp HHHHGGGCSEEEECCCCC
T ss_pred HHHHHhcCCEEEEEcCCC
Confidence 00146789999998765
No 132
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=94.77 E-value=0.011 Score=64.45 Aligned_cols=98 Identities=16% Similarity=0.196 Sum_probs=67.5
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEcc--------CC---------
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGD--------AS--------- 593 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD--------~t--------- 593 (791)
..+++|+|.|++|..+++.+. ..|.+|+++|.++++.+.+++.|..++.-| ..
T Consensus 184 ~~kV~ViG~G~iG~~aa~~a~----------~lGa~V~v~D~~~~~l~~~~~lGa~~~~l~~~~~~~~gya~~~~~~~~~ 253 (381)
T 3p2y_A 184 PASALVLGVGVAGLQALATAK----------RLGAKTTGYDVRPEVAEQVRSVGAQWLDLGIDAAGEGGYARELSEAERA 253 (381)
T ss_dssp CCEEEEESCSHHHHHHHHHHH----------HHTCEEEEECSSGGGHHHHHHTTCEECCCC-------------CHHHHH
T ss_pred CCEEEEECchHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCeEEeccccccccccchhhhhHHHHh
Confidence 468999999999999999998 889999999999999999988776654321 11
Q ss_pred -CHHHHHhcCCCCCcEEEEEe--CCH-HHHHHHHHHHHHhCCCCcEEEEe
Q 003861 594 -RPAVLLSAGITSPKAVMIMY--TDK-KRTIEAVQRLRLAFPAIPIYARA 639 (791)
Q Consensus 594 -~~~~L~~agi~~a~~viv~~--~~d-~~n~~~~~~ar~l~p~~~iiara 639 (791)
+.+.+++ -+.++|.+|.+. +.+ ...+..-..++.+.|+.-|+-.+
T Consensus 254 ~~~~~l~e-~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA 302 (381)
T 3p2y_A 254 QQQQALED-AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLA 302 (381)
T ss_dssp HHHHHHHH-HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred hhHHHHHH-HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEe
Confidence 1233433 368999887664 221 22233345667777764454443
No 133
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=94.77 E-value=0.021 Score=64.61 Aligned_cols=84 Identities=12% Similarity=0.218 Sum_probs=59.0
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++.|+|+|++|+.+|+.|+ ..|.+|++.|.+++...++...|+.+. + ++++ ++++|.|+
T Consensus 277 GktVgIIG~G~IG~~vA~~l~----------~~G~~V~v~d~~~~~~~~a~~~G~~~~-----~---l~el-l~~aDiVi 337 (494)
T 3d64_A 277 GKIAVVAGYGDVGKGCAQSLR----------GLGATVWVTEIDPICALQAAMEGYRVV-----T---MEYA-ADKADIFV 337 (494)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------TTTCEEEEECSCHHHHHHHHTTTCEEC-----C---HHHH-TTTCSEEE
T ss_pred CCEEEEEccCHHHHHHHHHHH----------HCCCEEEEEeCChHhHHHHHHcCCEeC-----C---HHHH-HhcCCEEE
Confidence 457999999999999999998 889999999999987655555565431 2 3332 57899888
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcE
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPI 635 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~i 635 (791)
.+++. .++.-....+.+.|+..+
T Consensus 338 ~~~~t--~~lI~~~~l~~MK~gAil 360 (494)
T 3d64_A 338 TATGN--YHVINHDHMKAMRHNAIV 360 (494)
T ss_dssp ECSSS--SCSBCHHHHHHCCTTEEE
T ss_pred ECCCc--ccccCHHHHhhCCCCcEE
Confidence 88743 222223455666665433
No 134
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=94.77 E-value=0.02 Score=63.27 Aligned_cols=85 Identities=16% Similarity=0.280 Sum_probs=58.9
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.++|+|+|++|+.+++.|+ ..|.+|++.|.||.+...+...|+.+. +-++. ++++|.++
T Consensus 220 GktV~ViG~G~IGk~vA~~Lr----------a~Ga~Viv~D~dp~ra~~A~~~G~~v~----~Leea-----l~~ADIVi 280 (435)
T 3gvp_A 220 GKQVVVCGYGEVGKGCCAALK----------AMGSIVYVTEIDPICALQACMDGFRLV----KLNEV-----IRQVDIVI 280 (435)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEEC----CHHHH-----TTTCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------HCCCEEEEEeCChhhhHHHHHcCCEec----cHHHH-----HhcCCEEE
Confidence 457999999999999999998 889999999999987776766675432 11222 35789887
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEE
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIY 636 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~ii 636 (791)
.++++ .++.-....+.+.|+..++
T Consensus 281 ~atgt--~~lI~~e~l~~MK~gailI 304 (435)
T 3gvp_A 281 TCTGN--KNVVTREHLDRMKNSCIVC 304 (435)
T ss_dssp ECSSC--SCSBCHHHHHHSCTTEEEE
T ss_pred ECCCC--cccCCHHHHHhcCCCcEEE
Confidence 76543 2233334555555554333
No 135
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=94.72 E-value=0.11 Score=51.71 Aligned_cols=73 Identities=14% Similarity=0.203 Sum_probs=51.5
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
..++.|+|.|.+|..+++.|. +.|++|+++|.+++ .++++|.++
T Consensus 19 ~~~I~iiG~G~mG~~la~~l~----------~~g~~V~~~~~~~~--------------------------~~~~aD~vi 62 (209)
T 2raf_A 19 GMEITIFGKGNMGQAIGHNFE----------IAGHEVTYYGSKDQ--------------------------ATTLGEIVI 62 (209)
T ss_dssp -CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECTTCC--------------------------CSSCCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEcCCHH--------------------------HhccCCEEE
Confidence 346999999999999999998 78999999998876 457899999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEEecC
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQD 641 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiara~~ 641 (791)
+++..+ ....+...++...++ .+++...+
T Consensus 63 ~av~~~-~~~~v~~~l~~~~~~-~~vi~~~~ 91 (209)
T 2raf_A 63 MAVPYP-ALAALAKQYATQLKG-KIVVDITN 91 (209)
T ss_dssp ECSCHH-HHHHHHHHTHHHHTT-SEEEECCC
T ss_pred EcCCcH-HHHHHHHHHHHhcCC-CEEEEECC
Confidence 999843 333333333332224 45544433
No 136
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=94.71 E-value=0.074 Score=53.78 Aligned_cols=73 Identities=14% Similarity=0.094 Sum_probs=58.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh--cCCCEEEccCCCHHHHHhc--CCCCC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--LGFPILYGDASRPAVLLSA--GITSP 606 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~--~~~~~v~GD~t~~~~L~~a--gi~~a 606 (791)
++++|.|. |.+|+.+++.|. ++|++|++++.+++..+++.+ .+..++.+|.+|++.++++ ...+.
T Consensus 8 k~vlITGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~i 77 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALH----------ATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPV 77 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCC
T ss_pred cEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCC
Confidence 45788887 799999999998 789999999999988776543 3677889999999988765 34567
Q ss_pred cEEEEEeC
Q 003861 607 KAVMIMYT 614 (791)
Q Consensus 607 ~~viv~~~ 614 (791)
|.+|-..+
T Consensus 78 d~vi~~Ag 85 (244)
T 3d3w_A 78 DLLVNNAA 85 (244)
T ss_dssp CEEEECCC
T ss_pred CEEEECCc
Confidence 88876653
No 137
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=94.70 E-value=0.073 Score=56.91 Aligned_cols=104 Identities=17% Similarity=0.210 Sum_probs=64.8
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-----------cCCCEEEccCCCHH----
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----------LGFPILYGDASRPA---- 596 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-----------~~~~~v~GD~t~~~---- 596 (791)
+++.|+|.|.+|..++..|. +.|++|++.|.|++.++++.+ .|. ..|..+..+
T Consensus 7 ~kI~vIGaG~MG~~iA~~la----------~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~--~~g~~~~~~~~~~ 74 (319)
T 2dpo_A 7 GDVLIVGSGLVGRSWAMLFA----------SGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGS--LKGSLSAEEQLSL 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTC--CCSSSCHHHHHHT
T ss_pred ceEEEEeeCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCc--cccccchHHHhhc
Confidence 47999999999999999998 789999999999999887643 231 111100011
Q ss_pred -----HHHhcCCCCCcEEEEEeCCHHHHHH-HHHHHHHh-CCCCcEEEEecChhhHHHHH
Q 003861 597 -----VLLSAGITSPKAVMIMYTDKKRTIE-AVQRLRLA-FPAIPIYARAQDMMHLLDLK 649 (791)
Q Consensus 597 -----~L~~agi~~a~~viv~~~~d~~n~~-~~~~ar~l-~p~~~iiara~~~~~~~~L~ 649 (791)
.+++ -+++||.|+.+++++..-.. +...+.+. .|+ .|++...+.-....+.
T Consensus 75 i~~~~~~~e-av~~aDlVieavpe~~~~k~~v~~~l~~~~~~~-~Ii~s~tS~i~~~~la 132 (319)
T 2dpo_A 75 ISSCTNLAE-AVEGVVHIQECVPENLDLKRKIFAQLDSIVDDR-VVLSSSSSCLLPSKLF 132 (319)
T ss_dssp EEEECCHHH-HTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSS-SEEEECCSSCCHHHHH
T ss_pred eEEeCCHHH-HHhcCCEEEEeccCCHHHHHHHHHHHHhhCCCC-eEEEEeCCChHHHHHH
Confidence 1111 25789999999987643222 22233333 333 4666544444444443
No 138
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=94.67 E-value=0.062 Score=56.33 Aligned_cols=72 Identities=15% Similarity=0.157 Sum_probs=59.4
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-----cCCCEEEccCCCHHHHHhcCCCC
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----LGFPILYGDASRPAVLLSAGITS 605 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-----~~~~~v~GD~t~~~~L~~agi~~ 605 (791)
++++|.| .|..|+.+++.|. +.|.+|++++.++++.+++.+ .+..++.+|.+|++.++++ +++
T Consensus 120 k~vlVtGaaGGiG~aia~~L~----------~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~-~~~ 188 (287)
T 1lu9_A 120 KKAVVLAGTGPVGMRSAALLA----------GEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEA-VKG 188 (287)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHH-TTT
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHH-HHh
Confidence 4789999 8999999999998 789999999999887665532 3567888999999887664 566
Q ss_pred CcEEEEEeC
Q 003861 606 PKAVMIMYT 614 (791)
Q Consensus 606 a~~viv~~~ 614 (791)
+|.+|-+++
T Consensus 189 ~DvlVn~ag 197 (287)
T 1lu9_A 189 AHFVFTAGA 197 (287)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 898888875
No 139
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=94.63 E-value=0.14 Score=54.97 Aligned_cols=110 Identities=17% Similarity=0.212 Sum_probs=73.0
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
++.|+|+|.+|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+....+.|. ++.+++ .++|+|+
T Consensus 4 rvgiIG~G~~g~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~~--~~ll~~---~~~D~V~ 69 (344)
T 3ezy_A 4 RIGVIGLGRIGTIHAENLKM---------IDDAILYAISDVREDRLREMKEKLGVEKAYKDP--HELIED---PNVDAVL 69 (344)
T ss_dssp EEEEECCSHHHHHHHHHGGG---------STTEEEEEEECSCHHHHHHHHHHHTCSEEESSH--HHHHHC---TTCCEEE
T ss_pred EEEEEcCCHHHHHHHHHHHh---------CCCcEEEEEECCCHHHHHHHHHHhCCCceeCCH--HHHhcC---CCCCEEE
Confidence 68999999999999999972 3567776 67999999877654 5655455432 344442 5789999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEcC
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAILE 659 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~p 659 (791)
++++++. -...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+..
T Consensus 70 i~tp~~~-h~~~~~~al~~g--k~v~~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~ 122 (344)
T 3ezy_A 70 VCSSTNT-HSELVIACAKAK--KHVFCEKPLSLNLADVDRMIEETKKADVILFTGF 122 (344)
T ss_dssp ECSCGGG-HHHHHHHHHHTT--CEEEEESCSCSCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred EcCCCcc-hHHHHHHHHhcC--CeEEEECCCCCCHHHHHHHHHHHHHhCCcEEEee
Confidence 9998754 344455555554 467765 4555554444 45576555443
No 140
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=94.59 E-value=0.023 Score=62.13 Aligned_cols=110 Identities=17% Similarity=0.230 Sum_probs=73.6
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.+.|+|.|+.|+.+++.++ +.|++++++|.+++.. ........+.+|.+|.+.+.++- +++|.+.
T Consensus 12 ~~~IlIlG~G~lg~~la~aa~----------~lG~~viv~d~~~~~p--~~~~ad~~~~~~~~d~~~l~~~~-~~~dvi~ 78 (377)
T 3orq_A 12 GATIGIIGGGQLGKMMAQSAQ----------KMGYKVVVLDPSEDCP--CRYVAHEFIQAKYDDEKALNQLG-QKCDVIT 78 (377)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCTTCT--TGGGSSEEEECCTTCHHHHHHHH-HHCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEECCCCCh--hhhhCCEEEECCCCCHHHHHHHH-HhCCcce
Confidence 457999999999999999998 8999999999987632 22233457789999999888763 5578653
Q ss_pred EEeCCHHHHHHHHHHHHH---hCCCCcEEEEecChhhHH-HHHHCCCCe
Q 003861 611 IMYTDKKRTIEAVQRLRL---AFPAIPIYARAQDMMHLL-DLKKAGATD 655 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~---l~p~~~iiara~~~~~~~-~L~~~Gad~ 655 (791)
...++ .+......+.+ ..|+...+..+.|....+ .++++|+..
T Consensus 79 ~~~E~--~~~~~l~~l~~~~~v~p~~~~~~~~~dK~~~k~~l~~~Gip~ 125 (377)
T 3orq_A 79 YEFEN--ISAQQLKLLCEKYNIPQGYQAIQLLQDRLTEKETLKSAGTKV 125 (377)
T ss_dssp ESSTT--SCHHHHHHHHHHSCCTTTTHHHHHHHSHHHHHHHHHHTTCCB
T ss_pred ecccc--cCHHHHHHHhhhcCCCCCHHHHHHhcCHHHHHHHHHHCCCCC
Confidence 33322 22222222332 234445666666666555 567888653
No 141
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=94.54 E-value=0.21 Score=53.54 Aligned_cols=133 Identities=19% Similarity=0.185 Sum_probs=82.3
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHHH----HHhc------CCCEEEccCCCHHHH
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKE----SRKL------GFPILYGDASRPAVL 598 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~~----~~~~------~~~~v~GD~t~~~~L 598 (791)
..++.|+|.|.+|..++..|. ..|. +++++|.|+++++. +.+. +..+..+| .
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~----------~~~~~~~l~l~D~~~~k~~g~a~DL~~~~~~~~~~v~i~~~~---~--- 68 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALI----------NQGITDELVVIDVNKEKAMGDVMDLNHGKAFAPQPVKTSYGT---Y--- 68 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECSCHHHHHHHHHHHHHTGGGSSSCCEEEEEC---G---
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCceEEEEecchHHHHHHHHHHHhccccccCCeEEEeCc---H---
Confidence 457999999999999999997 5565 89999999987654 4331 22232222 2
Q ss_pred HhcCCCCCcEEEEEeCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhHH--HHHH-CCC--CeEEc
Q 003861 599 LSAGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHLL--DLKK-AGA--TDAIL 658 (791)
Q Consensus 599 ~~agi~~a~~viv~~~~---------d--~~n~~----~~~~ar~l~p~~~iiara~~~~~~~--~L~~-~Ga--d~Vi~ 658 (791)
..+++||.+|++.+. | ..|.. ++..+++..|+.. +..+.||.+.- .+.+ .|. ++|+-
T Consensus 69 --~a~~~aDvVvi~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~-vlvvtNPvd~~t~~~~k~~g~p~~rviG 145 (326)
T 3pqe_A 69 --EDCKDADIVCICAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGI-FLVATNPVDILTYATWKFSGLPKERVIG 145 (326)
T ss_dssp --GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSE-EEECSSSHHHHHHHHHHHHCCCGGGEEE
T ss_pred --HHhCCCCEEEEecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeE-EEEcCChHHHHHHHHHHhcCCCHHHEEe
Confidence 246789999888642 1 34543 4456666788765 44455655432 2333 343 45665
Q ss_pred C-cHHHHHHHHHHHHhhcCCChHHH
Q 003861 659 E-NAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 659 p-~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
- ..+-..|+-..+-+.+|+++..+
T Consensus 146 ~gt~LD~~R~~~~la~~lgv~~~~V 170 (326)
T 3pqe_A 146 SGTTLDSARFRFMLSEYFGAAPQNV 170 (326)
T ss_dssp CTTHHHHHHHHHHHHHHHTCCGGGE
T ss_pred eccccHHHHHHHHHHHHhCCCHHHc
Confidence 3 33334555556666677777544
No 142
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=94.51 E-value=0.047 Score=58.24 Aligned_cols=109 Identities=17% Similarity=0.210 Sum_probs=69.0
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEE---ccC--------CCHHHHHh
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILY---GDA--------SRPAVLLS 600 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~---GD~--------t~~~~L~~ 600 (791)
.++.|+|.|.+|..++..|. +.|++|++++.++. +.+++.|..+-. |+. +++ ++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~----------~~g~~V~~~~r~~~--~~i~~~Gl~~~~~~~g~~~~~~~~~~~~~---~~ 67 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLA----------KTGHCVSVVSRSDY--ETVKAKGIRIRSATLGDYTFRPAAVVRSA---AE 67 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHH----------HTTCEEEEECSTTH--HHHHHHCEEEEETTTCCEEECCSCEESCG---GG
T ss_pred CEEEEECcCHHHHHHHHHHH----------hCCCeEEEEeCChH--HHHHhCCcEEeecCCCcEEEeeeeeECCH---HH
Confidence 46899999999999999998 78999999999872 666666644332 111 122 22
Q ss_pred cCCCCCcEEEEEeCCHHHHHHHHHHHHH-hCCCCcEEEEecChhhHHHHHH-CCCCeEE
Q 003861 601 AGITSPKAVMIMYTDKKRTIEAVQRLRL-AFPAIPIYARAQDMMHLLDLKK-AGATDAI 657 (791)
Q Consensus 601 agi~~a~~viv~~~~d~~n~~~~~~ar~-l~p~~~iiara~~~~~~~~L~~-~Gad~Vi 657 (791)
+ .+++|.|++++.....- .+...++. +.++..|+.-.+--++.+.+++ .+.+.|+
T Consensus 68 ~-~~~~DlVilavK~~~~~-~~l~~l~~~l~~~t~Iv~~~nGi~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 68 L-ETKPDCTLLCIKVVEGA-DRVGLLRDAVAPDTGIVLISNGIDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp C-SSCCSEEEECCCCCTTC-CHHHHHTTSCCTTCEEEEECSSSSCSHHHHHHSTTSCEE
T ss_pred c-CCCCCEEEEecCCCChH-HHHHHHHhhcCCCCEEEEeCCCCChHHHHHHHCCCCcEE
Confidence 2 24899999998874321 22333333 3445456666665555455544 4555544
No 143
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=94.49 E-value=0.078 Score=59.98 Aligned_cols=74 Identities=22% Similarity=0.340 Sum_probs=53.9
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHh---------
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLS--------- 600 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~--------- 600 (791)
.+-++.|+|.|.+|..+|..|. +.|++|+++|.|+++++.+.+.+.+... +.-++.+++
T Consensus 7 ~~~~I~VIG~G~vG~~lA~~la----------~~G~~V~~~d~~~~~v~~l~~~~~~i~e--~gl~~~l~~~~~~~~l~~ 74 (478)
T 2y0c_A 7 GSMNLTIIGSGSVGLVTGACLA----------DIGHDVFCLDVDQAKIDILNNGGVPIHE--PGLKEVIARNRSAGRLRF 74 (478)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHTTCCSSCC--TTHHHHHHHHHHTTCEEE
T ss_pred CCceEEEECcCHHHHHHHHHHH----------hCCCEEEEEECCHHHHHHHHCCCCCcCC--CCHHHHHHHhcccCCEEE
Confidence 3557999999999999999998 7899999999999999999875433221 110111110
Q ss_pred -----cCCCCCcEEEEEeCC
Q 003861 601 -----AGITSPKAVMIMYTD 615 (791)
Q Consensus 601 -----agi~~a~~viv~~~~ 615 (791)
..+++||.+++++++
T Consensus 75 ttd~~~a~~~aDvviiaVpt 94 (478)
T 2y0c_A 75 STDIEAAVAHGDVQFIAVGT 94 (478)
T ss_dssp ECCHHHHHHHCSEEEECCCC
T ss_pred ECCHHHHhhcCCEEEEEeCC
Confidence 113578999999876
No 144
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=94.48 E-value=0.18 Score=56.81 Aligned_cols=69 Identities=20% Similarity=0.344 Sum_probs=51.5
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-----------cC---------CCEEEcc
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----------LG---------FPILYGD 591 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-----------~~---------~~~v~GD 591 (791)
++|.|+|.|.+|..+|..|. +.|++|+++|.+++..+.+.+ .| .....
T Consensus 38 ~kV~VIGaG~MG~~iA~~la----------~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i-- 105 (463)
T 1zcj_A 38 SSVGVLGLGTMGRGIAISFA----------RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRF-- 105 (463)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEE--
T ss_pred CEEEEECcCHHHHHHHHHHH----------hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhh--
Confidence 46999999999999999998 889999999999998776543 11 00111
Q ss_pred CCCHHHHHhcCCCCCcEEEEEeCCHH
Q 003861 592 ASRPAVLLSAGITSPKAVMIMYTDKK 617 (791)
Q Consensus 592 ~t~~~~L~~agi~~a~~viv~~~~d~ 617 (791)
.+|.+ .+++||.||.++.++.
T Consensus 106 ~~~~~-----~~~~aDlVIeaVpe~~ 126 (463)
T 1zcj_A 106 SSSTK-----ELSTVDLVVEAVFEDM 126 (463)
T ss_dssp ESCGG-----GGTTCSEEEECCCSCH
T ss_pred cCCHH-----HHCCCCEEEEcCCCCH
Confidence 22322 2578999999998864
No 145
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=94.48 E-value=0.045 Score=58.50 Aligned_cols=67 Identities=30% Similarity=0.408 Sum_probs=55.4
Q ss_pred CCCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 530 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 530 ~~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
..++++|.|. |-+|+.+++.|. +.|++|++++.+++. .+..++.+|.+|++.++++ ++++|+
T Consensus 18 ~~~~vlVtGatG~iG~~l~~~L~----------~~G~~V~~~~r~~~~------~~~~~~~~Dl~d~~~~~~~-~~~~d~ 80 (347)
T 4id9_A 18 GSHMILVTGSAGRVGRAVVAALR----------TQGRTVRGFDLRPSG------TGGEEVVGSLEDGQALSDA-IMGVSA 80 (347)
T ss_dssp ---CEEEETTTSHHHHHHHHHHH----------HTTCCEEEEESSCCS------SCCSEEESCTTCHHHHHHH-HTTCSE
T ss_pred CCCEEEEECCCChHHHHHHHHHH----------hCCCEEEEEeCCCCC------CCccEEecCcCCHHHHHHH-HhCCCE
Confidence 3457999998 999999999998 789999999998865 5789999999999998875 347888
Q ss_pred EEEEe
Q 003861 609 VMIMY 613 (791)
Q Consensus 609 viv~~ 613 (791)
|+-+.
T Consensus 81 vih~A 85 (347)
T 4id9_A 81 VLHLG 85 (347)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 87554
No 146
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=94.47 E-value=0.18 Score=53.79 Aligned_cols=136 Identities=14% Similarity=0.129 Sum_probs=87.3
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCC--CcEEEEcCChhh--HHHHHhcCCCE-EEcc-C-CCHHHHHhcCCC
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSV--VKESRKLGFPI-LYGD-A-SRPAVLLSAGIT 604 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g--~~vvvID~d~~~--v~~~~~~~~~~-v~GD-~-t~~~~L~~agi~ 604 (791)
++.|+|. |.+|+.++..|. ..| .+++++|.|+.. +.++.+...+. +.+- + +|.+ + .++
T Consensus 2 KI~IiGa~G~VG~~la~~L~----------~~~~~~ev~L~Di~~~~~~a~dL~~~~~~~~l~~~~~t~d~~---~-a~~ 67 (314)
T 1mld_A 2 KVAVLGASGGIGQPLSLLLK----------NSPLVSRLTLYDIAHTPGVAADLSHIETRATVKGYLGPEQLP---D-CLK 67 (314)
T ss_dssp EEEEETTTSTTHHHHHHHHH----------TCTTCSEEEEEESSSHHHHHHHHTTSSSSCEEEEEESGGGHH---H-HHT
T ss_pred EEEEECCCChHHHHHHHHHH----------hCCCCcEEEEEeCCccHHHHHHHhccCcCceEEEecCCCCHH---H-HhC
Confidence 5889998 999999999997 556 689999999822 22333322221 2221 1 2222 1 246
Q ss_pred CCcEEEEEeCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhHH------HHHHCC---CCeEEcCc
Q 003861 605 SPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHLL------DLKKAG---ATDAILEN 660 (791)
Q Consensus 605 ~a~~viv~~~~---------d--~~n~~----~~~~ar~l~p~~~iiara~~~~~~~------~L~~~G---ad~Vi~p~ 660 (791)
+||.|+++.+. | ..|.. ++..+++..|+..++. +.||.+.- .+++.+ .++|+--.
T Consensus 68 ~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~sNPv~~~~~i~~~~~~~~~~~p~~rvig~t 146 (314)
T 1mld_A 68 GCDVVVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICI-ISNPVNSTIPITAEVFKKHGVYNPNKIFGVT 146 (314)
T ss_dssp TCSEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE-CSSCHHHHHHHHHHHHHHTTCCCTTSEEECC
T ss_pred CCCEEEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-ECCCcchhHHHHHHHHHHcCCCCcceEEEee
Confidence 88988887642 1 23444 3455667788876666 67777754 366765 77888876
Q ss_pred HHHHHHHHHHHHhhcCCChHHHH
Q 003861 661 AETSLQLGSKLLKGFGVMSDDVT 683 (791)
Q Consensus 661 ~~~~~~la~~~l~~l~~~~~~~~ 683 (791)
.+-..++-..+-+.+|+++..++
T Consensus 147 ~Ld~~r~~~~la~~l~v~~~~v~ 169 (314)
T 1mld_A 147 TLDIVRANAFVAELKGLDPARVS 169 (314)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCB
T ss_pred cccHHHHHHHHHHHhCcChHhEE
Confidence 65466677777777888875543
No 147
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=94.44 E-value=0.14 Score=53.96 Aligned_cols=39 Identities=26% Similarity=0.441 Sum_probs=35.6
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHH
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKES 580 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~ 580 (791)
++|.|+|.|.+|..++..|. +.|++|+++|.|+++++++
T Consensus 16 ~~I~VIG~G~mG~~iA~~la----------~~G~~V~~~d~~~~~~~~~ 54 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAA----------ATGHTVVLVDQTEDILAKS 54 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCeEEEEECCHHHHHHH
Confidence 46999999999999999998 7899999999999988765
No 148
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=94.44 E-value=0.054 Score=58.13 Aligned_cols=70 Identities=19% Similarity=0.200 Sum_probs=53.8
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEc-------cC-CCHHHHHhc
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYG-------DA-SRPAVLLSA 601 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~G-------D~-t~~~~L~~a 601 (791)
+.-++.|+|.|.+|..++..|. +.|++|+++|.++++++.+++.+.+. +. .. ++ .++
T Consensus 13 ~~~kI~iIG~G~mG~ala~~L~----------~~G~~V~~~~r~~~~~~~l~~~g~~~-~~~~~~~~~~~~~~---~~~- 77 (335)
T 1z82_A 13 MEMRFFVLGAGSWGTVFAQMLH----------ENGEEVILWARRKEIVDLINVSHTSP-YVEESKITVRATND---LEE- 77 (335)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHHHSCBT-TBTTCCCCSEEESC---GGG-
T ss_pred cCCcEEEECcCHHHHHHHHHHH----------hCCCeEEEEeCCHHHHHHHHHhCCcc-cCCCCeeeEEEeCC---HHH-
Confidence 4557999999999999999998 78999999999999999888776422 10 00 12 222
Q ss_pred CCCCCcEEEEEeCC
Q 003861 602 GITSPKAVMIMYTD 615 (791)
Q Consensus 602 gi~~a~~viv~~~~ 615 (791)
++++|.|++++.+
T Consensus 78 -~~~aDvVil~vk~ 90 (335)
T 1z82_A 78 -IKKEDILVIAIPV 90 (335)
T ss_dssp -CCTTEEEEECSCG
T ss_pred -hcCCCEEEEECCH
Confidence 6789999999885
No 149
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=94.44 E-value=0.19 Score=53.62 Aligned_cols=73 Identities=16% Similarity=0.204 Sum_probs=58.8
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh----hHHHHHh-------cCCCEEEccCCCHHHH
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS----VVKESRK-------LGFPILYGDASRPAVL 598 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~----~v~~~~~-------~~~~~v~GD~t~~~~L 598 (791)
.++++|.|. |-+|+.+++.|. +.|++|++++.++. ..+.+.+ .++.++.||.+|++.+
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 94 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLL----------KLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTC 94 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHH
T ss_pred CCeEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHH
Confidence 457999995 999999999998 78999999998543 3444443 5788999999999999
Q ss_pred HhcCCCCCcEEEEEeC
Q 003861 599 LSAGITSPKAVMIMYT 614 (791)
Q Consensus 599 ~~agi~~a~~viv~~~ 614 (791)
+++ ++++|+||-+..
T Consensus 95 ~~~-~~~~d~Vih~A~ 109 (351)
T 3ruf_A 95 EQV-MKGVDHVLHQAA 109 (351)
T ss_dssp HHH-TTTCSEEEECCC
T ss_pred HHH-hcCCCEEEECCc
Confidence 876 348998887764
No 150
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=94.43 E-value=0.079 Score=55.71 Aligned_cols=68 Identities=13% Similarity=0.169 Sum_probs=54.3
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
++++|.| .|.+|+.+++.|. +.|++|++++.+++..+ +. +..++.+|.+ ++.++++ ++++|+||
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~-~~--~~~~~~~Dl~-~~~~~~~-~~~~d~Vi 67 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIK----------NDGNTPIILTRSIGNKA-IN--DYEYRVSDYT-LEDLINQ-LNDVDAVV 67 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCCC--------CCEEEECCCC-HHHHHHH-TTTCSEEE
T ss_pred CEEEEECCCcHHHHHHHHHHH----------hCCCEEEEEeCCCCccc-CC--ceEEEEcccc-HHHHHHh-hcCCCEEE
Confidence 4689998 5999999999998 78999999999865544 33 7899999999 9988876 45899888
Q ss_pred EEeC
Q 003861 611 IMYT 614 (791)
Q Consensus 611 v~~~ 614 (791)
-+..
T Consensus 68 h~a~ 71 (311)
T 3m2p_A 68 HLAA 71 (311)
T ss_dssp ECCC
T ss_pred Eccc
Confidence 7654
No 151
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=94.39 E-value=0.047 Score=60.80 Aligned_cols=73 Identities=14% Similarity=0.253 Sum_probs=55.7
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHh----------cC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLS----------AG 602 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~----------ag 602 (791)
+.-|+|.|.+|..+|..|. +.|++|+++|.|+++++.+.+...+. .++.-++.+++ ..
T Consensus 13 ~~~ViGlGyvGlp~A~~La----------~~G~~V~~~D~~~~kv~~L~~g~~pi--~epgl~~ll~~~~~~g~l~~ttd 80 (431)
T 3ojo_A 13 KLTVVGLGYIGLPTSIMFA----------KHGVDVLGVDINQQTIDKLQNGQISI--EEPGLQEVYEEVLSSGKLKVSTT 80 (431)
T ss_dssp EEEEECCSTTHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHTTCCSS--CCTTHHHHHHHHHHTTCEEEESS
T ss_pred ccEEEeeCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHCCCCCc--CCCCHHHHHHhhcccCceEEeCc
Confidence 4778999999999999998 88999999999999999998654333 23333333332 12
Q ss_pred CCCCcEEEEEeCCHH
Q 003861 603 ITSPKAVMIMYTDKK 617 (791)
Q Consensus 603 i~~a~~viv~~~~d~ 617 (791)
+++||.++++.+++.
T Consensus 81 ~~~aDvvii~VpTp~ 95 (431)
T 3ojo_A 81 PEASDVFIIAVPTPN 95 (431)
T ss_dssp CCCCSEEEECCCCCB
T ss_pred hhhCCEEEEEeCCCc
Confidence 568999999987753
No 152
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=94.31 E-value=0.054 Score=58.16 Aligned_cols=69 Identities=16% Similarity=0.270 Sum_probs=52.9
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEcc---------CCCHHHHHhcC
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGD---------ASRPAVLLSAG 602 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD---------~t~~~~L~~ag 602 (791)
.++.|+|.|.+|..++..|. +.|++|+++|.+ ++.+.+++.|......+ .++++ +
T Consensus 4 mkI~IiGaG~~G~~~a~~L~----------~~g~~V~~~~r~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~---~-- 67 (335)
T 3ghy_A 4 TRICIVGAGAVGGYLGARLA----------LAGEAINVLARG-ATLQALQTAGLRLTEDGATHTLPVRATHDAA---A-- 67 (335)
T ss_dssp CCEEEESCCHHHHHHHHHHH----------HTTCCEEEECCH-HHHHHHHHTCEEEEETTEEEEECCEEESCHH---H--
T ss_pred CEEEEECcCHHHHHHHHHHH----------HCCCEEEEEECh-HHHHHHHHCCCEEecCCCeEEEeeeEECCHH---H--
Confidence 37999999999999999998 789999999986 67777877776553211 12333 2
Q ss_pred CCCCcEEEEEeCCH
Q 003861 603 ITSPKAVMIMYTDK 616 (791)
Q Consensus 603 i~~a~~viv~~~~d 616 (791)
++++|.|++++...
T Consensus 68 ~~~~D~Vilavk~~ 81 (335)
T 3ghy_A 68 LGEQDVVIVAVKAP 81 (335)
T ss_dssp HCCCSEEEECCCHH
T ss_pred cCCCCEEEEeCCch
Confidence 36899999998874
No 153
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=94.29 E-value=0.02 Score=64.47 Aligned_cols=99 Identities=14% Similarity=0.172 Sum_probs=65.0
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++.|+|+|++|+.+|+.++ ..|.+|++.|.+++...++.+.|+.+ .+ ++++ ++++|.|+
T Consensus 257 GktVgIIG~G~IG~~vA~~l~----------~~G~~Viv~d~~~~~~~~a~~~g~~~-----~~---l~el-l~~aDiVi 317 (479)
T 1v8b_A 257 GKIVVICGYGDVGKGCASSMK----------GLGARVYITEIDPICAIQAVMEGFNV-----VT---LDEI-VDKGDFFI 317 (479)
T ss_dssp TSEEEEECCSHHHHHHHHHHH----------HHTCEEEEECSCHHHHHHHHTTTCEE-----CC---HHHH-TTTCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------hCcCEEEEEeCChhhHHHHHHcCCEe-----cC---HHHH-HhcCCEEE
Confidence 457999999999999999998 78999999999998875666666643 12 3332 57899888
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEEecC-h-hhHHHHHH
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQD-M-MHLLDLKK 650 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiara~~-~-~~~~~L~~ 650 (791)
.+++.. ++.-....+.+.|+..++=-.+- . -+.+.|.+
T Consensus 318 ~~~~t~--~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~ 357 (479)
T 1v8b_A 318 TCTGNV--DVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFN 357 (479)
T ss_dssp ECCSSS--SSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHT
T ss_pred ECCChh--hhcCHHHHhhcCCCcEEEEeCCCCccccchhhhc
Confidence 886432 22222344556665443322222 2 25555555
No 154
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=94.23 E-value=0.17 Score=54.91 Aligned_cols=108 Identities=22% Similarity=0.221 Sum_probs=72.8
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHhcCCCEEEccCCCHH-HHHhcCCCCCcEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKLGFPILYGDASRPA-VLLSAGITSPKAV 609 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~~~~~~v~GD~t~~~-~L~~agi~~a~~v 609 (791)
-++.|+|+|.+|+..++.|.+ ..+.+++ +.|.|+++.+.+++.|..+ .+|.+ .+++ .+.|+|
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~---------~~~~~l~av~d~~~~~~~~a~~~g~~~----~~~~~~ll~~---~~~D~V 69 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASA---------ADNLEVHGVFDILAEKREAAAQKGLKI----YESYEAVLAD---EKVDAV 69 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHT---------STTEEEEEEECSSHHHHHHHHTTTCCB----CSCHHHHHHC---TTCCEE
T ss_pred CcEEEECcCHHHHHHHHHHHh---------CCCcEEEEEEcCCHHHHHHHHhcCCce----eCCHHHHhcC---CCCCEE
Confidence 369999999999999999972 3477776 5599999988777677643 24444 4432 578999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEc
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAIL 658 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~ 658 (791)
+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+.
T Consensus 70 ~i~tp~~~h-~~~~~~al~aG--khVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 122 (359)
T 3e18_A 70 LIATPNDSH-KELAISALEAG--KHVVCEKPVTMTSEDLLAIMDVAKRVNKHFMVH 122 (359)
T ss_dssp EECSCGGGH-HHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEcCCcHHH-HHHHHHHHHCC--CCEEeeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 999987543 44445555544 467774 4565555554 5557665443
No 155
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=94.20 E-value=0.07 Score=59.74 Aligned_cols=99 Identities=14% Similarity=0.118 Sum_probs=69.6
Q ss_pred cCCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC---cEEEEcCChhhHHHHHhcCCCEEEccCCCH---HHHHhcC
Q 003861 529 EGSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW---PFVAFDLNPSVVKESRKLGFPILYGDASRP---AVLLSAG 602 (791)
Q Consensus 529 ~~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~---~vvvID~d~~~v~~~~~~~~~~v~GD~t~~---~~L~~ag 602 (791)
..+++++|+|+|.+|+.+++.|.+ ..+. +++++|.+.+..+.....|......+.++. +++.++
T Consensus 11 ~~~~rVlIIGaGgVG~~va~lla~---------~~dv~~~~I~vaD~~~~~~~~~~~~g~~~~~~~Vdadnv~~~l~aL- 80 (480)
T 2ph5_A 11 LFKNRFVILGFGCVGQALMPLIFE---------KFDIKPSQVTIIAAEGTKVDVAQQYGVSFKLQQITPQNYLEVIGST- 80 (480)
T ss_dssp CCCSCEEEECCSHHHHHHHHHHHH---------HBCCCGGGEEEEESSCCSCCHHHHHTCEEEECCCCTTTHHHHTGGG-
T ss_pred cCCCCEEEECcCHHHHHHHHHHHh---------CCCCceeEEEEeccchhhhhHHhhcCCceeEEeccchhHHHHHHHH-
Confidence 457789999999999999999973 4455 799999887754334445666666665555 445544
Q ss_pred CCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEec
Q 003861 603 ITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQ 640 (791)
Q Consensus 603 i~~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~ 640 (791)
+++.|.|| ....+..|+.+...+.+.+ +..+-.++
T Consensus 81 l~~~DvVI-N~s~~~~~l~Im~acleaG--v~YlDTa~ 115 (480)
T 2ph5_A 81 LEENDFLI-DVSIGISSLALIILCNQKG--ALYINAAT 115 (480)
T ss_dssp CCTTCEEE-ECCSSSCHHHHHHHHHHHT--CEEEESSC
T ss_pred hcCCCEEE-ECCccccCHHHHHHHHHcC--CCEEECCC
Confidence 45567665 4555678888999999986 45555554
No 156
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=94.14 E-value=0.03 Score=61.00 Aligned_cols=72 Identities=15% Similarity=0.059 Sum_probs=58.4
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++|.|. |.+|+.+++.|. +.|++|++++.+++........+..++.+|.+|++.++++ ++++|+||
T Consensus 30 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~~~~~~~-~~~~d~Vi 98 (379)
T 2c5a_A 30 LKISITGAGGFIASHIARRLK----------HEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVMENCLKV-TEGVDHVF 98 (379)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSHHHHHHH-HTTCSEEE
T ss_pred CeEEEECCccHHHHHHHHHHH----------HCCCeEEEEECCCccchhhccCCceEEECCCCCHHHHHHH-hCCCCEEE
Confidence 46899988 999999999998 7899999999987654433445788999999999988875 35789887
Q ss_pred EEeC
Q 003861 611 IMYT 614 (791)
Q Consensus 611 v~~~ 614 (791)
-+..
T Consensus 99 h~A~ 102 (379)
T 2c5a_A 99 NLAA 102 (379)
T ss_dssp ECCC
T ss_pred ECce
Confidence 7653
No 157
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=94.10 E-value=0.073 Score=57.26 Aligned_cols=72 Identities=13% Similarity=0.168 Sum_probs=58.9
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCC-CC-cEEEEcCChhhHHHHHh----cCCCEEEccCCCHHHHHhcCCC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTV-GW-PFVAFDLNPSVVKESRK----LGFPILYGDASRPAVLLSAGIT 604 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~-g~-~vvvID~d~~~v~~~~~----~~~~~v~GD~t~~~~L~~agi~ 604 (791)
+.++|.|. |.+|+.+++.|. +. |+ +|++++.+++..+.+.+ .+..++.||.+|++.++++ ++
T Consensus 22 k~vlVTGatG~iG~~l~~~L~----------~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~-~~ 90 (344)
T 2gn4_A 22 QTILITGGTGSFGKCFVRKVL----------DTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYA-LE 90 (344)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHH-TT
T ss_pred CEEEEECCCcHHHHHHHHHHH----------hhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHH-Hh
Confidence 46888885 999999999998 67 87 99999999987665543 4678899999999998876 35
Q ss_pred CCcEEEEEeC
Q 003861 605 SPKAVMIMYT 614 (791)
Q Consensus 605 ~a~~viv~~~ 614 (791)
++|+||-+..
T Consensus 91 ~~D~Vih~Aa 100 (344)
T 2gn4_A 91 GVDICIHAAA 100 (344)
T ss_dssp TCSEEEECCC
T ss_pred cCCEEEECCC
Confidence 7898887764
No 158
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.03 E-value=0.078 Score=56.78 Aligned_cols=91 Identities=18% Similarity=0.168 Sum_probs=65.6
Q ss_pred CCCEEEeCCChhHHH-HHHHhhhhccCCCCCCCCCCcEEEEcCCh--hhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCc
Q 003861 531 SEPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFVAFDLNP--SVVKESRKLGFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 531 ~~~viI~G~G~~G~~-la~~L~~~~~~~~~~~~~g~~vvvID~d~--~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
.+++.++|.|..|.. +|+.|. ++|++|.+.|.++ +..+++++.|.++..|. +++.+.+ .++|
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L~----------~~G~~V~~~D~~~~~~~~~~L~~~gi~v~~g~--~~~~l~~---~~~d 68 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIAK----------EAGFEVSGCDAKMYPPMSTQLEALGIDVYEGF--DAAQLDE---FKAD 68 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHHH----------HTTCEEEEEESSCCTTHHHHHHHTTCEEEESC--CGGGGGS---CCCS
T ss_pred CcEEEEEEECHHHHHHHHHHHH----------hCCCEEEEEcCCCCcHHHHHHHhCCCEEECCC--CHHHcCC---CCCC
Confidence 357999999999996 999998 8999999999875 35677888899998873 4443321 3688
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEe
Q 003861 608 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARA 639 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~l~p~~~iiara 639 (791)
.||+..+=+.+|-. ...+|+.+ ++|+-+.
T Consensus 69 ~vV~Spgi~~~~p~-~~~a~~~g--i~v~~~~ 97 (326)
T 3eag_A 69 VYVIGNVAKRGMDV-VEAILNLG--LPYISGP 97 (326)
T ss_dssp EEEECTTCCTTCHH-HHHHHHTT--CCEEEHH
T ss_pred EEEECCCcCCCCHH-HHHHHHcC--CcEEeHH
Confidence 88776544444444 45677765 6777653
No 159
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=94.01 E-value=0.069 Score=58.50 Aligned_cols=110 Identities=14% Similarity=0.181 Sum_probs=74.4
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.+.|+|.|+.|+.+++.++ +.|++|+++|.+++.. ........+.+|..|.+.+.+.. +++|++.
T Consensus 14 ~k~IlIlG~G~~g~~la~aa~----------~~G~~vi~~d~~~~~~--~~~~ad~~~~~~~~d~~~l~~~~-~~~dvI~ 80 (389)
T 3q2o_A 14 GKTIGIIGGGQLGRMMALAAK----------EMGYKIAVLDPTKNSP--CAQVADIEIVASYDDLKAIQHLA-EISDVVT 80 (389)
T ss_dssp TSEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSTTCT--TTTTCSEEEECCTTCHHHHHHHH-HTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HcCCEEEEEeCCCCCc--hHHhCCceEecCcCCHHHHHHHH-HhCCEee
Confidence 357999999999999999998 8999999999887532 11222346678999988877654 4578663
Q ss_pred EEeCCHHHHHHHHHHHHHh---CCCCcEEEEecChhhHH-HHHHCCCCe
Q 003861 611 IMYTDKKRTIEAVQRLRLA---FPAIPIYARAQDMMHLL-DLKKAGATD 655 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l---~p~~~iiara~~~~~~~-~L~~~Gad~ 655 (791)
...+ ..+...+..+.+. .|+...+..+.|....+ .++++|+..
T Consensus 81 ~~~e--~~~~~~~~~l~~~g~~~~~~~~~~~~~dK~~~k~~l~~~Gip~ 127 (389)
T 3q2o_A 81 YEFE--NIDYRCLQWLEKHAYLPQGSQLLSKTQNRFTEKNAIEKAGLPV 127 (389)
T ss_dssp ESCC--CCCHHHHHHHHHHSCCTTCSHHHHHTTSHHHHHHHHHHTTCCC
T ss_pred eccc--cccHHHHHHHHhhCccCCCHHHHHHhcCHHHHHHHHHHCCCCC
Confidence 3333 2333344444443 45555666677766655 578888653
No 160
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=94.00 E-value=0.18 Score=53.13 Aligned_cols=106 Identities=15% Similarity=0.171 Sum_probs=69.3
Q ss_pred CCEEEeCCChhHHH-HHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~-la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
-++.|+|+|.+|+. .++.|.+ ..+.+++ +.|.|+++.+.+.+ .|... .+|.+-+-+ ++|+
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~a~~~~~~~----~~~~~~ll~----~~D~ 69 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTK---------SERFEFVGAFTPNKVKREKICSDYRIMP----FDSIESLAK----KCDC 69 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTS---------CSSSEEEEEECSCHHHHHHHHHHHTCCB----CSCHHHHHT----TCSE
T ss_pred CcEEEEecCHHHHHHHHHHHHh---------CCCeEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHHh----cCCE
Confidence 47999999999996 8888861 3577877 78999999887754 56654 345554443 8999
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEE
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAI 657 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi 657 (791)
|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+
T Consensus 70 V~i~tp~~~h-~~~~~~al~~g--k~vl~EKP~~~~~~~~~~l~~~a~~~g~~~~v 122 (308)
T 3uuw_A 70 IFLHSSTETH-YEIIKILLNLG--VHVYVDKPLASTVSQGEELIELSTKKNLNLMV 122 (308)
T ss_dssp EEECCCGGGH-HHHHHHHHHTT--CEEEECSSSSSSHHHHHHHHHHHHHHTCCEEE
T ss_pred EEEeCCcHhH-HHHHHHHHHCC--CcEEEcCCCCCCHHHHHHHHHHHHHcCCEEEE
Confidence 9999987643 34444444443 456663 3344443333 444655444
No 161
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=93.99 E-value=0.078 Score=56.39 Aligned_cols=135 Identities=13% Similarity=0.114 Sum_probs=81.8
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cC-----CC-EEEccCCCHHHHHhcCC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LG-----FP-ILYGDASRPAVLLSAGI 603 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~-----~~-~v~GD~t~~~~L~~agi 603 (791)
++.|+|.|.+|..++..|.+ ...|++|+++|.|+++++.... .. .. -+.. .+|. + . +
T Consensus 2 kI~VIGaG~vG~~la~~la~--------~~~g~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~-t~d~---~-~-l 67 (310)
T 1guz_A 2 KITVIGAGNVGATTAFRLAE--------KQLARELVLLDVVEGIPQGKALDMYESGPVGLFDTKVTG-SNDY---A-D-T 67 (310)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------TTCCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCEEEE-ESCG---G-G-G
T ss_pred EEEEECCCHHHHHHHHHHHh--------CCCCCEEEEEeCChhHHHHHHHhHHhhhhcccCCcEEEE-CCCH---H-H-H
Confidence 57899999999999999972 0148999999999988765421 11 11 1221 1232 2 2 6
Q ss_pred CCCcEEEEEeCCH----H-------HHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHHH---CCCCeEEcC-cHH
Q 003861 604 TSPKAVMIMYTDK----K-------RTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLKK---AGATDAILE-NAE 662 (791)
Q Consensus 604 ~~a~~viv~~~~d----~-------~n~~----~~~~ar~l~p~~~iiara~~~~~~--~~L~~---~Gad~Vi~p-~~~ 662 (791)
++||.+|++.+.. . .|.. ++..+++..|+..++.. .|+-+. ..+++ ...++|+-- ...
T Consensus 68 ~~aDvViiav~~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~viv~-tNP~~~~~~~~~~~~~~~~~rviG~gt~l 146 (310)
T 1guz_A 68 ANSDIVIITAGLPRKPGMTREDLLMKNAGIVKEVTDNIMKHSKNPIIIVV-SNPLDIMTHVAWVRSGLPKERVIGMAGVL 146 (310)
T ss_dssp TTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCSSCEEEEC-CSSHHHHHHHHHHHHCSCGGGEEEECHHH
T ss_pred CCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEE-cCchHHHHHHHHHhcCCChHHEEECCCch
Confidence 8999999998531 1 4443 34455556787665554 555543 23444 333467655 333
Q ss_pred HHHHHHHHHHhhcCCChHHH
Q 003861 663 TSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 663 ~~~~la~~~l~~l~~~~~~~ 682 (791)
-..++...+-+.+|+++..+
T Consensus 147 d~~r~~~~la~~l~v~~~~v 166 (310)
T 1guz_A 147 DAARFRSFIAMELGVSMQDI 166 (310)
T ss_dssp HHHHHHHHHHHHHTCCGGGE
T ss_pred HHHHHHHHHHHHhCCCHHHe
Confidence 34566666666677776444
No 162
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=93.96 E-value=0.08 Score=53.20 Aligned_cols=74 Identities=19% Similarity=0.152 Sum_probs=57.4
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc--CCCEEEccCCCHHHHHhcC-----
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL--GFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~--~~~~v~GD~t~~~~L~~ag----- 602 (791)
.+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+.+.+. ....+.+|.+|++.++++=
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 74 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLH----------AKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEE 74 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHH
Confidence 446788875 789999999998 8899999999999887766543 5788999999998776531
Q ss_pred -CCCCcEEEEEeC
Q 003861 603 -ITSPKAVMIMYT 614 (791)
Q Consensus 603 -i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 75 ~~~~id~li~~Ag 87 (234)
T 2ehd_A 75 AFGELSALVNNAG 87 (234)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 136787776643
No 163
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=93.94 E-value=0.19 Score=53.28 Aligned_cols=106 Identities=19% Similarity=0.229 Sum_probs=69.0
Q ss_pred CCEEEeCCChhHHH-HHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~-la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
-++.|+|+|.+|+. .++.|.+ ..+.+++ +.|.|+++.+.+.+ .|.+ -.++.+.| ..++|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~---------~~~~~lvav~d~~~~~~~~~~~~~g~~----~~~~~~~l----~~~~D~ 68 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAA---------ASDWTLQGAWSPTRAKALPICESWRIP----YADSLSSL----AASCDA 68 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHS---------CSSEEEEEEECSSCTTHHHHHHHHTCC----BCSSHHHH----HTTCSE
T ss_pred ceEEEECCCHHHHHHHHHHHHh---------CCCeEEEEEECCCHHHHHHHHHHcCCC----ccCcHHHh----hcCCCE
Confidence 36999999999996 8888861 3567776 88999998877654 4655 23455555 257999
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEE
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAI 657 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi 657 (791)
|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+
T Consensus 69 V~i~tp~~~h-~~~~~~al~~G--~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~ 121 (319)
T 1tlt_A 69 VFVHSSTASH-FDVVSTLLNAG--VHVCVDKPLAENLRDAERLVELAARKKLTLMV 121 (319)
T ss_dssp EEECSCTTHH-HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEeCCchhH-HHHHHHHHHcC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEE
Confidence 9999987543 34444444443 466664 2344443333 556776554
No 164
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=93.94 E-value=0.27 Score=52.30 Aligned_cols=131 Identities=15% Similarity=0.208 Sum_probs=78.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHHH----hc------CCCEEEccCCCHHHHH
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESR----KL------GFPILYGDASRPAVLL 599 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~~----~~------~~~~v~GD~t~~~~L~ 599 (791)
+.++.|+|.|.+|..++..|. ..|+ +|+++|.|+++.+... +. ...+... +|.+
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la----------~~g~~~V~l~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t--~d~~--- 68 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVG----------KDNLADVVLFDIAEGIPQGKALDITHSMVMFGSTSKVIGT--DDYA--- 68 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HHTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG---
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCceEEEEeCCchHHHHHHHHHHhhhhhcCCCcEEEEC--CCHH---
Confidence 347999999999999999998 6787 9999999998766531 11 1222211 2222
Q ss_pred hcCCCCCcEEEEEeCC---------H--HHHH----HHHHHHHHhCCCCcEEEEecChhhH--HHHHHC-C--CCeEEcC
Q 003861 600 SAGITSPKAVMIMYTD---------K--KRTI----EAVQRLRLAFPAIPIYARAQDMMHL--LDLKKA-G--ATDAILE 659 (791)
Q Consensus 600 ~agi~~a~~viv~~~~---------d--~~n~----~~~~~ar~l~p~~~iiara~~~~~~--~~L~~~-G--ad~Vi~p 659 (791)
.+++||.||.+.+- | .+|. .++..+++..|+..++ .+.|+.+. ..+.+. | .++|+-.
T Consensus 69 --a~~~aDiVi~avg~p~~~g~~r~d~~~~~~~i~~~i~~~i~~~~~~~iii-~~sNp~~~~~~~~~~~~~~~~~rviG~ 145 (317)
T 2ewd_A 69 --DISGSDVVIITASIPGRPKDDRSELLFGNARILDSVAEGVKKYCPNAFVI-CITNPLDVMVSHFQKVSGLPHNKVCGM 145 (317)
T ss_dssp --GGTTCSEEEECCCCSSCCSSCGGGGHHHHHHHHHHHHHHHHHHCTTSEEE-ECCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred --HhCCCCEEEEeCCCCCCCCCcHHHHHHhhHHHHHHHHHHHHHHCCCcEEE-EeCChHHHHHHHHHHhhCCCHHHEEec
Confidence 35789999998821 0 2333 3455666667765444 44455443 234333 3 3567765
Q ss_pred c-HHHHHHHHHHHHhhcCCCh
Q 003861 660 N-AETSLQLGSKLLKGFGVMS 679 (791)
Q Consensus 660 ~-~~~~~~la~~~l~~l~~~~ 679 (791)
. .+-..+....+.+.+|.++
T Consensus 146 ~t~ld~~r~~~~la~~lg~~~ 166 (317)
T 2ewd_A 146 AGVLDSSRFRTFIAQHFGVNA 166 (317)
T ss_dssp CHHHHHHHHHHHHHHHHTSCG
T ss_pred cCcHHHHHHHHHHHHHhCcCh
Confidence 2 3333455555656666654
No 165
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=93.93 E-value=0.063 Score=55.26 Aligned_cols=73 Identities=14% Similarity=0.081 Sum_probs=56.1
Q ss_pred CCEEEeCC-Ch-hHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhc-
Q 003861 532 EPVVIVGF-GQ-MGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA- 601 (791)
Q Consensus 532 ~~viI~G~-G~-~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~a- 601 (791)
+.++|.|. |+ +|+.+++.|. ++|++|+++|.+++..++..+ ....++.+|.+|++.++++
T Consensus 23 k~vlITGasg~GIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~ 92 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRAL----------LEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALI 92 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCCCchHHHHHHHHH----------HCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHH
Confidence 46888998 75 9999999998 889999999999987655432 2467889999999877653
Q ss_pred -----CCCCCcEEEEEeC
Q 003861 602 -----GITSPKAVMIMYT 614 (791)
Q Consensus 602 -----gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 93 ~~~~~~~g~id~li~~Ag 110 (266)
T 3o38_A 93 TQTVEKAGRLDVLVNNAG 110 (266)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHhCCCcEEEECCC
Confidence 1135677776654
No 166
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=93.85 E-value=0.12 Score=52.55 Aligned_cols=75 Identities=13% Similarity=0.132 Sum_probs=58.8
Q ss_pred CCCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhc--CC
Q 003861 530 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA--GI 603 (791)
Q Consensus 530 ~~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~a--gi 603 (791)
..++++|.|. |-+|+.+++.|. ++|++|++++.+++..+++.+ ....++.+|.+|++.++++ ..
T Consensus 13 ~~k~vlVTGas~gIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 82 (249)
T 3f9i_A 13 TGKTSLITGASSGIGSAIARLLH----------KLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT 82 (249)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC
T ss_pred CCCEEEEECCCChHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc
Confidence 3456788876 678999999998 889999999999998777653 3567888999999887754 34
Q ss_pred CCCcEEEEEeC
Q 003861 604 TSPKAVMIMYT 614 (791)
Q Consensus 604 ~~a~~viv~~~ 614 (791)
.+.|.+|-..+
T Consensus 83 ~~id~li~~Ag 93 (249)
T 3f9i_A 83 SNLDILVCNAG 93 (249)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57787776543
No 167
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=93.84 E-value=0.033 Score=59.24 Aligned_cols=66 Identities=18% Similarity=0.385 Sum_probs=50.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+.+.|+|+|++|+.+++.|+ ..|.+|++.|.+++. +.+.+.|.... +-++.+ +++|.|++
T Consensus 143 ~~vgIiG~G~IG~~~A~~l~----------~~G~~V~~~d~~~~~-~~~~~~g~~~~----~l~ell-----~~aDvV~l 202 (307)
T 1wwk_A 143 KTIGIIGFGRIGYQVAKIAN----------ALGMNILLYDPYPNE-ERAKEVNGKFV----DLETLL-----KESDVVTI 202 (307)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCCH-HHHHHTTCEEC----CHHHHH-----HHCSEEEE
T ss_pred ceEEEEccCHHHHHHHHHHH----------HCCCEEEEECCCCCh-hhHhhcCcccc----CHHHHH-----hhCCEEEE
Confidence 46999999999999999998 889999999999877 45556665321 223344 36898988
Q ss_pred EeCCHH
Q 003861 612 MYTDKK 617 (791)
Q Consensus 612 ~~~~d~ 617 (791)
+.+..+
T Consensus 203 ~~p~~~ 208 (307)
T 1wwk_A 203 HVPLVE 208 (307)
T ss_dssp CCCCST
T ss_pred ecCCCh
Confidence 887643
No 168
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=93.83 E-value=0.1 Score=55.34 Aligned_cols=85 Identities=14% Similarity=0.140 Sum_probs=52.2
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
-++.|+|+|++|+..++.|.+ ..+.+++ ++|.|+++.+. .|.. + ++.+-+.+. +++|+|+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~---------~~~~elvav~d~~~~~~~~---~g~~--~---~~~~~l~~~--~~~DvVi 70 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALRE---------APDFEIAGIVRRNPAEVPF---ELQP--F---RVVSDIEQL--ESVDVAL 70 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---------CTTEEEEEEECC----------CCTT--S---CEESSGGGS--SSCCEEE
T ss_pred CEEEEECChHHHHHHHHHHhc---------CCCCEEEEEEcCCHHHHHH---cCCC--c---CCHHHHHhC--CCCCEEE
Confidence 479999999999999999972 4577877 68999987654 4443 1 122223333 7899999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEE
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYAR 638 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiar 638 (791)
++++++. ....+..+.+.+ .+++..
T Consensus 71 iatp~~~-h~~~~~~al~aG--~~Vi~e 95 (304)
T 3bio_A 71 VCSPSRE-VERTALEILKKG--ICTADS 95 (304)
T ss_dssp ECSCHHH-HHHHHHHHHTTT--CEEEEC
T ss_pred ECCCchh-hHHHHHHHHHcC--CeEEEC
Confidence 9998653 344455555543 467754
No 169
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=93.82 E-value=0.071 Score=55.92 Aligned_cols=69 Identities=20% Similarity=0.206 Sum_probs=55.2
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++|.|. |-+|+.+++.|. +.|++|+++|.+++........+..++.+|.+|++ ++++ ++. |+||-
T Consensus 2 ~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~-~~~~-~~~-d~vih 68 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLV----------ELGYEVVVVDNLSSGRREFVNPSAELHVRDLKDYS-WGAG-IKG-DVVFH 68 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEECCCSSCCGGGSCTTSEEECCCTTSTT-TTTT-CCC-SEEEE
T ss_pred EEEEECCCChHHHHHHHHHH----------hCCCEEEEEeCCCCCchhhcCCCceEEECccccHH-HHhh-cCC-CEEEE
Confidence 4788888 999999999998 78999999999877655444567889999999999 6554 333 88876
Q ss_pred EeC
Q 003861 612 MYT 614 (791)
Q Consensus 612 ~~~ 614 (791)
+..
T Consensus 69 ~A~ 71 (312)
T 3ko8_A 69 FAA 71 (312)
T ss_dssp CCS
T ss_pred CCC
Confidence 654
No 170
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=93.81 E-value=0.045 Score=58.84 Aligned_cols=66 Identities=18% Similarity=0.314 Sum_probs=50.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
.++.|+|+|++|+.+++.|. ..|.+|++.|.+++..+.+.+.+.... +-++.+ +++|.|++
T Consensus 156 ~~vgIIG~G~iG~~iA~~l~----------~~G~~V~~~d~~~~~~~~~~~~g~~~~----~l~e~l-----~~aDvVi~ 216 (330)
T 2gcg_A 156 STVGIIGLGRIGQAIARRLK----------PFGVQRFLYTGRQPRPEEAAEFQAEFV----STPELA-----AQSDFIVV 216 (330)
T ss_dssp CEEEEECCSHHHHHHHHHHG----------GGTCCEEEEESSSCCHHHHHTTTCEEC----CHHHHH-----HHCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHH----------HCCCEEEEECCCCcchhHHHhcCceeC----CHHHHH-----hhCCEEEE
Confidence 46999999999999999998 889999999998876666655554321 223344 46798988
Q ss_pred EeCCH
Q 003861 612 MYTDK 616 (791)
Q Consensus 612 ~~~~d 616 (791)
+++.+
T Consensus 217 ~vp~~ 221 (330)
T 2gcg_A 217 ACSLT 221 (330)
T ss_dssp CCCCC
T ss_pred eCCCC
Confidence 88764
No 171
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=93.77 E-value=0.073 Score=57.76 Aligned_cols=69 Identities=17% Similarity=0.233 Sum_probs=51.3
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCE-----------EEccCCCHHHHHhc
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPI-----------LYGDASRPAVLLSA 601 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~-----------v~GD~t~~~~L~~a 601 (791)
+|.|+|.|.+|..++..|. +.|++|+++|.++++++.+.+.+.+. +.. .++++ ++
T Consensus 17 kI~iIG~G~mG~~la~~L~----------~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~---~~ 82 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLS----------KKCREVCVWHMNEEEVRLVNEKRENVLFLKGVQLASNITF-TSDVE---KA 82 (366)
T ss_dssp EEEEECCSHHHHHHHHHHT----------TTEEEEEEECSCHHHHHHHHHHTBCTTTSTTCBCCTTEEE-ESCHH---HH
T ss_pred eEEEECCCHHHHHHHHHHH----------hCCCEEEEEECCHHHHHHHHHcCcccccccccccccceee-eCCHH---HH
Confidence 6999999999999999998 78999999999999998887654210 110 12222 11
Q ss_pred CCCCCcEEEEEeCCH
Q 003861 602 GITSPKAVMIMYTDK 616 (791)
Q Consensus 602 gi~~a~~viv~~~~d 616 (791)
++++|.|++++.++
T Consensus 83 -~~~aDvVilav~~~ 96 (366)
T 1evy_A 83 -YNGAEIILFVIPTQ 96 (366)
T ss_dssp -HTTCSSEEECCCHH
T ss_pred -HcCCCEEEECCChH
Confidence 35789999999863
No 172
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=93.74 E-value=0.06 Score=58.00 Aligned_cols=73 Identities=18% Similarity=0.088 Sum_probs=57.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCC--CCCcEEEEcCChh-------------hHHHHHhcCCCEEEccCCCH
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNT--VGWPFVAFDLNPS-------------VVKESRKLGFPILYGDASRP 595 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~--~g~~vvvID~d~~-------------~v~~~~~~~~~~v~GD~t~~ 595 (791)
++++|.|. |-+|+.+++.|. + .|++|+++|.+++ ........+..++.+|.+|+
T Consensus 11 ~~vlVTGatG~IG~~l~~~L~----------~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~ 80 (362)
T 3sxp_A 11 QTILITGGAGFVGSNLAFHFQ----------ENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNP 80 (362)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------hhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCH
Confidence 46888865 999999999998 7 8999999998654 12222334568999999999
Q ss_pred HHHHhcCCCCCcEEEEEeC
Q 003861 596 AVLLSAGITSPKAVMIMYT 614 (791)
Q Consensus 596 ~~L~~agi~~a~~viv~~~ 614 (791)
+.++++...++|+||-+..
T Consensus 81 ~~~~~~~~~~~D~vih~A~ 99 (362)
T 3sxp_A 81 LDLRRLEKLHFDYLFHQAA 99 (362)
T ss_dssp HHHHHHTTSCCSEEEECCC
T ss_pred HHHHHhhccCCCEEEECCc
Confidence 9999997778998886553
No 173
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=93.68 E-value=0.35 Score=47.77 Aligned_cols=95 Identities=19% Similarity=0.170 Sum_probs=62.9
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc--------CCCEEEccCCCHHHHHhcC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL--------GFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~--------~~~~v~GD~t~~~~L~~ag 602 (791)
.++++-+|+|. |.......+ . +.+|+.+|.+++.++.+++. .+.++.||+.+. +. .
T Consensus 56 ~~~vLDlGcG~-G~~~~~la~----------~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~--~~--~ 119 (204)
T 3njr_A 56 GELLWDIGGGS-GSVSVEWCL----------A-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAA--LA--D 119 (204)
T ss_dssp TCEEEEETCTT-CHHHHHHHH----------T-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGG--GT--T
T ss_pred CCEEEEecCCC-CHHHHHHHH----------c-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhh--cc--c
Confidence 45788888886 654444443 3 88999999999998877642 466889998762 22 2
Q ss_pred CCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChh
Q 003861 603 ITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMM 643 (791)
Q Consensus 603 i~~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~ 643 (791)
.+.+|.+++....+.. .+....+.+.|+-.++....+.+
T Consensus 120 ~~~~D~v~~~~~~~~~--~l~~~~~~LkpgG~lv~~~~~~~ 158 (204)
T 3njr_A 120 LPLPEAVFIGGGGSQA--LYDRLWEWLAPGTRIVANAVTLE 158 (204)
T ss_dssp SCCCSEEEECSCCCHH--HHHHHHHHSCTTCEEEEEECSHH
T ss_pred CCCCCEEEECCcccHH--HHHHHHHhcCCCcEEEEEecCcc
Confidence 3578988766544333 44555566777767766555443
No 174
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=93.62 E-value=0.086 Score=54.24 Aligned_cols=73 Identities=14% Similarity=0.135 Sum_probs=56.6
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcC--CCEEEccCCCHHHHHhc------
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLG--FPILYGDASRPAVLLSA------ 601 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~--~~~v~GD~t~~~~L~~a------ 601 (791)
.+.++|-|. +.+|+.+++.|. ++|.+|++.|.|++..+++.+++ ...+.+|.+|++..+++
T Consensus 2 nK~vlVTGas~GIG~aia~~la----------~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~ 71 (247)
T 3ged_A 2 NRGVIVTGGGHGIGKQICLDFL----------EAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAME 71 (247)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCEEEEecCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHH
Confidence 356777775 569999999998 89999999999999988877654 45678999999877653
Q ss_pred CCCCCcEEEEEe
Q 003861 602 GITSPKAVMIMY 613 (791)
Q Consensus 602 gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 72 ~~g~iDiLVNNA 83 (247)
T 3ged_A 72 KLQRIDVLVNNA 83 (247)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 234677666443
No 175
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=93.57 E-value=0.098 Score=56.04 Aligned_cols=72 Identities=21% Similarity=0.197 Sum_probs=56.8
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh----hHHHHH-------hcCCCEEEccCCCHHHHH
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS----VVKESR-------KLGFPILYGDASRPAVLL 599 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~----~v~~~~-------~~~~~~v~GD~t~~~~L~ 599 (791)
.+++|.|. |.+|+.+++.|. +.|++|++++.++. ..+.+. ..+..++.+|.+|++.++
T Consensus 28 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 97 (352)
T 1sb8_A 28 KVWLITGVAGFIGSNLLETLL----------KLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCN 97 (352)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHH
T ss_pred CeEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHH
Confidence 46899998 999999999998 78999999998653 333332 256788999999999887
Q ss_pred hcCCCCCcEEEEEeC
Q 003861 600 SAGITSPKAVMIMYT 614 (791)
Q Consensus 600 ~agi~~a~~viv~~~ 614 (791)
++ ++++|+||-+.+
T Consensus 98 ~~-~~~~d~vih~A~ 111 (352)
T 1sb8_A 98 NA-CAGVDYVLHQAA 111 (352)
T ss_dssp HH-HTTCSEEEECCS
T ss_pred HH-hcCCCEEEECCc
Confidence 75 348898887765
No 176
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=93.56 E-value=0.1 Score=58.47 Aligned_cols=89 Identities=17% Similarity=0.214 Sum_probs=65.3
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCCh----hhHHHHHhcCCCEEEccCCCHHHHHhcCCCC-
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP----SVVKESRKLGFPILYGDASRPAVLLSAGITS- 605 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~----~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~- 605 (791)
.+++.|+|.|..|..+|+.|. +.|++|.+.|.++ ...+.+++.|.++..|...+ +.+ ++
T Consensus 9 ~k~v~viG~G~sG~s~A~~l~----------~~G~~V~~~D~~~~~~~~~~~~L~~~gi~~~~g~~~~-~~~-----~~~ 72 (451)
T 3lk7_A 9 NKKVLVLGLARSGEAAARLLA----------KLGAIVTVNDGKPFDENPTAQSLLEEGIKVVCGSHPL-ELL-----DED 72 (451)
T ss_dssp TCEEEEECCTTTHHHHHHHHH----------HTTCEEEEEESSCGGGCHHHHHHHHTTCEEEESCCCG-GGG-----GSC
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------hCCCEEEEEeCCcccCChHHHHHHhCCCEEEECCChH-Hhh-----cCC
Confidence 458999999999999999998 8999999999864 34677888899998886532 222 34
Q ss_pred CcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEE
Q 003861 606 PKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR 638 (791)
Q Consensus 606 a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiar 638 (791)
+|.||+..+=+.+|-. ...+|+.+ ++|+.+
T Consensus 73 ~d~vv~spgi~~~~p~-~~~a~~~g--i~v~~~ 102 (451)
T 3lk7_A 73 FCYMIKNPGIPYNNPM-VKKALEKQ--IPVLTE 102 (451)
T ss_dssp EEEEEECTTSCTTSHH-HHHHHHTT--CCEECH
T ss_pred CCEEEECCcCCCCChh-HHHHHHCC--CcEEeH
Confidence 8988877655555544 45566664 455543
No 177
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=93.54 E-value=0.23 Score=53.13 Aligned_cols=138 Identities=10% Similarity=0.094 Sum_probs=85.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCC-------cEEEEcCC----hhhHH----HHHhcCCCEEEccCCCH
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGW-------PFVAFDLN----PSVVK----ESRKLGFPILYGDASRP 595 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~-------~vvvID~d----~~~v~----~~~~~~~~~v~GD~t~~ 595 (791)
.++.|+|. |.+|+.++..|. ..|. +++++|.+ +++.+ ++.+...+. .+|.+..
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~----------~~~~~~~~~~~ev~l~Di~~~~~~~~~~g~~~dl~~~~~~~-~~~i~~~ 74 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIA----------NGDMLGKDQPVILQLLEIPNEKAQKALQGVMMEIDDCAFPL-LAGMTAH 74 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHH----------TTTTTCTTCCEEEEEECCSCHHHHHHHHHHHHHHHTTTCTT-EEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHH----------hCCCcCCCCCCEEEEEcCCCccccccchhhHHHHhhhcccc-cCcEEEe
Confidence 47999998 999999999997 4453 89999999 55443 233322233 2444333
Q ss_pred HHHHhcCCCCCcEEEEEeCC---------H--HHHHH----HHHHHHHhC-CCCcEEEEecChhh--HHHHHHCC----C
Q 003861 596 AVLLSAGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAF-PAIPIYARAQDMMH--LLDLKKAG----A 653 (791)
Q Consensus 596 ~~L~~agi~~a~~viv~~~~---------d--~~n~~----~~~~ar~l~-p~~~iiara~~~~~--~~~L~~~G----a 653 (791)
+-+++ .+++||.|+.+.+- | ..|.. ++..+++.. |+..++... |+.+ ...+.+.- .
T Consensus 75 ~~~~~-al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~S-NPv~~~t~~~~~~~~~~p~ 152 (329)
T 1b8p_A 75 ADPMT-AFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVG-NPANTNAYIAMKSAPSLPA 152 (329)
T ss_dssp SSHHH-HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECS-SSHHHHHHHHHHTCTTSCG
T ss_pred cCcHH-HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEcc-CchHHHHHHHHHHcCCCCH
Confidence 33333 25789988877642 1 24544 455677775 886655554 5543 33334432 4
Q ss_pred CeEEcCcHHHHHHHHHHHHhhcCCChHHH
Q 003861 654 TDAILENAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 654 d~Vi~p~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
++++.....-..++-..+-+.+|+++..+
T Consensus 153 ~~v~g~t~Ld~~r~~~~la~~lgv~~~~v 181 (329)
T 1b8p_A 153 KNFTAMLRLDHNRALSQIAAKTGKPVSSI 181 (329)
T ss_dssp GGEEECCHHHHHHHHHHHHHHHTCCGGGE
T ss_pred HHEEEeecHHHHHHHHHHHHHhCcCHHHc
Confidence 56777776556666667777778777554
No 178
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=93.51 E-value=0.032 Score=61.47 Aligned_cols=98 Identities=16% Similarity=0.184 Sum_probs=66.4
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEcc----------------CCC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGD----------------ASR 594 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD----------------~t~ 594 (791)
..+|+|+|.|++|...++.+. ..|.+|++.|.++++.+.+++.|.+++.-+ .++
T Consensus 190 ~~kV~ViG~G~iG~~aa~~a~----------~lGa~V~v~D~~~~~l~~~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~ 259 (405)
T 4dio_A 190 AAKIFVMGAGVAGLQAIATAR----------RLGAVVSATDVRPAAKEQVASLGAKFIAVEDEEFKAAETAGGYAKEMSG 259 (405)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSTTHHHHHHHTTCEECCCCC-----------------C
T ss_pred CCEEEEECCcHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHcCCceeecccccccccccccchhhhcch
Confidence 468999999999999999998 899999999999999988888776543321 112
Q ss_pred H------HHHHhcCCCCCcEEEEEe--CC-HHHHHHHHHHHHHhCCCCcEEEEe
Q 003861 595 P------AVLLSAGITSPKAVMIMY--TD-KKRTIEAVQRLRLAFPAIPIYARA 639 (791)
Q Consensus 595 ~------~~L~~agi~~a~~viv~~--~~-d~~n~~~~~~ar~l~p~~~iiara 639 (791)
+ +.+++ -+.++|.+|.+. +. ....+..-..++.+.|+.-|+--+
T Consensus 260 ~~~~~~~~~l~e-~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA 312 (405)
T 4dio_A 260 EYQVKQAALVAE-HIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLA 312 (405)
T ss_dssp HHHHHHHHHHHH-HHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETT
T ss_pred hhhhhhHhHHHH-HhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEe
Confidence 1 34443 357899887663 22 122233345666777764444443
No 179
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=93.50 E-value=0.27 Score=52.66 Aligned_cols=110 Identities=17% Similarity=0.219 Sum_probs=68.8
Q ss_pred CCCEEEeCCChhHHHHHHHhh-hhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCc
Q 003861 531 SEPVVIVGFGQMGQVLANLLS-APLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~-~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
+-++.|+|+|.+|+..++.|. + ..+.+++ +.|.|+++.+.+.+ .|....+.|. ++.+++ .++|
T Consensus 8 ~~~v~iiG~G~ig~~~~~~l~~~---------~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~~~--~~~l~~---~~~D 73 (346)
T 3cea_A 8 PLRAAIIGLGRLGERHARHLVNK---------IQGVKLVAACALDSNQLEWAKNELGVETTYTNY--KDMIDT---ENID 73 (346)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHT---------CSSEEEEEEECSCHHHHHHHHHTTCCSEEESCH--HHHHTT---SCCS
T ss_pred cceEEEEcCCHHHHHHHHHHHhc---------CCCcEEEEEecCCHHHHHHHHHHhCCCcccCCH--HHHhcC---CCCC
Confidence 347999999999999999885 2 3567754 67999999877654 4664444332 334432 4789
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHC-CCCeEE
Q 003861 608 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKA-GATDAI 657 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~-Gad~Vi 657 (791)
+|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++. |....+
T Consensus 74 ~V~i~tp~~~h-~~~~~~al~~G--~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~~~ 128 (346)
T 3cea_A 74 AIFIVAPTPFH-PEMTIYAMNAG--LNVFCEKPLGLDFNEVDEMAKVIKSHPNQIFQS 128 (346)
T ss_dssp EEEECSCGGGH-HHHHHHHHHTT--CEEEECSCCCSCHHHHHHHHHHHHTCTTSCEEC
T ss_pred EEEEeCChHhH-HHHHHHHHHCC--CEEEEcCCCCCCHHHHHHHHHHHHhCCCCeEEE
Confidence 99999987543 33444444433 466663 2344444333 455 666554
No 180
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=93.50 E-value=0.098 Score=58.22 Aligned_cols=70 Identities=19% Similarity=0.184 Sum_probs=51.2
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEE-----------c--c-CCCHHH
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILY-----------G--D-ASRPAV 597 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~-----------G--D-~t~~~~ 597 (791)
.++.|+|.|.+|..+|..|. + |++|+++|.|+++++.+.+...+... + . .+|.+
T Consensus 37 mkIaVIGlG~mG~~lA~~La----------~-G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~~~~~l~~ttd~~- 104 (432)
T 3pid_A 37 MKITISGTGYVGLSNGVLIA----------Q-NHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAEKPLNFRATTDKH- 104 (432)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------T-TSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHHSCCCEEEESCHH-
T ss_pred CEEEEECcCHHHHHHHHHHH----------c-CCeEEEEecCHHHhhHHhccCCccccccHHHHHhhccCCeEEEcCHH-
Confidence 37999999999999999997 6 99999999999999988763222110 0 0 12221
Q ss_pred HHhcCCCCCcEEEEEeCCH
Q 003861 598 LLSAGITSPKAVMIMYTDK 616 (791)
Q Consensus 598 L~~agi~~a~~viv~~~~d 616 (791)
.-+++||.++++++++
T Consensus 105 ---ea~~~aDvViiaVPt~ 120 (432)
T 3pid_A 105 ---DAYRNADYVIIATPTD 120 (432)
T ss_dssp ---HHHTTCSEEEECCCCE
T ss_pred ---HHHhCCCEEEEeCCCc
Confidence 1246799999998875
No 181
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=93.49 E-value=0.064 Score=55.48 Aligned_cols=105 Identities=14% Similarity=0.119 Sum_probs=67.1
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
++.|+|.|.+|+.+++.|. +.|.++++.|.++++.+++.+ .+.. . + .++++ +++|.|+.
T Consensus 118 ~v~iiG~G~~g~~~a~~l~----------~~g~~v~v~~r~~~~~~~l~~~~~~~--~---~---~~~~~--~~~Divi~ 177 (263)
T 2d5c_A 118 PALVLGAGGAGRAVAFALR----------EAGLEVWVWNRTPQRALALAEEFGLR--A---V---PLEKA--REARLLVN 177 (263)
T ss_dssp CEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSHHHHHHHHHHHTCE--E---C---CGGGG--GGCSEEEE
T ss_pred eEEEECCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhccc--h---h---hHhhc--cCCCEEEE
Confidence 8999999999999999998 678899999999998777654 3442 1 1 23445 78999999
Q ss_pred EeCCHHH-HHHHHHHHHHhCCCCcEEEEecChh---hHHHHHHCCCCeEEc
Q 003861 612 MYTDKKR-TIEAVQRLRLAFPAIPIYARAQDMM---HLLDLKKAGATDAIL 658 (791)
Q Consensus 612 ~~~~d~~-n~~~~~~ar~l~p~~~iiara~~~~---~~~~L~~~Gad~Vi~ 658 (791)
+++.... +..-......+.++..++--..++. -.+..++.|+. ++.
T Consensus 178 ~tp~~~~~~~~~~l~~~~l~~g~~viD~~~~p~~t~l~~~a~~~g~~-~v~ 227 (263)
T 2d5c_A 178 ATRVGLEDPSASPLPAELFPEEGAAVDLVYRPLWTRFLREAKAKGLK-VQT 227 (263)
T ss_dssp CSSTTTTCTTCCSSCGGGSCSSSEEEESCCSSSSCHHHHHHHHTTCE-EEC
T ss_pred ccCCCCCCCCCCCCCHHHcCCCCEEEEeecCCcccHHHHHHHHCcCE-EEC
Confidence 9987631 1000001222344433443333332 34556778884 443
No 182
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=93.43 E-value=0.051 Score=58.87 Aligned_cols=85 Identities=12% Similarity=0.171 Sum_probs=57.7
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++.|+|+|++|+.+++.|+ ..|.+|++.|.++...+.+.+.|...+ .+.+.+ ++++|.|+
T Consensus 164 gktvGIIG~G~IG~~vA~~l~----------~~G~~V~~~dr~~~~~~~~~~~g~~~~----~~l~el----l~~aDvV~ 225 (351)
T 3jtm_A 164 GKTIGTVGAGRIGKLLLQRLK----------PFGCNLLYHDRLQMAPELEKETGAKFV----EDLNEM----LPKCDVIV 225 (351)
T ss_dssp TCEEEEECCSHHHHHHHHHHG----------GGCCEEEEECSSCCCHHHHHHHCCEEC----SCHHHH----GGGCSEEE
T ss_pred CCEEeEEEeCHHHHHHHHHHH----------HCCCEEEEeCCCccCHHHHHhCCCeEc----CCHHHH----HhcCCEEE
Confidence 347999999999999999998 899999999998766666666665332 222222 35688888
Q ss_pred EEeCCHHH--HHHHHHHHHHhCCCC
Q 003861 611 IMYTDKKR--TIEAVQRLRLAFPAI 633 (791)
Q Consensus 611 v~~~~d~~--n~~~~~~ar~l~p~~ 633 (791)
++++..+. ++.-...++.+.|+.
T Consensus 226 l~~Plt~~t~~li~~~~l~~mk~ga 250 (351)
T 3jtm_A 226 INMPLTEKTRGMFNKELIGKLKKGV 250 (351)
T ss_dssp ECSCCCTTTTTCBSHHHHHHSCTTE
T ss_pred ECCCCCHHHHHhhcHHHHhcCCCCC
Confidence 88775322 222234455555553
No 183
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=93.43 E-value=0.48 Score=50.57 Aligned_cols=134 Identities=16% Similarity=0.242 Sum_probs=82.9
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHH----HHHhc------CCCEEEccCCCHHHHHh
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVK----ESRKL------GFPILYGDASRPAVLLS 600 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~----~~~~~------~~~~v~GD~t~~~~L~~ 600 (791)
.++.|+|.|.+|..++..|. ..+. +++++|.|+++.+ ++++. ...+ .+. +|.+
T Consensus 6 ~kI~iiGaG~vG~~~a~~l~----------~~~~~~v~l~Di~~~~~~g~a~dL~~~~~~~~~~~~v-~~t-~d~~---- 69 (321)
T 3p7m_A 6 KKITLVGAGNIGGTLAHLAL----------IKQLGDVVLFDIAQGMPNGKALDLLQTCPIEGVDFKV-RGT-NDYK---- 69 (321)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCCEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCE-EEE-SCGG----
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCceEEEEeCChHHHHHHHHHHHhhhhhcCCCcEE-EEc-CCHH----
Confidence 47999999999999999997 4555 9999999998754 23321 2233 321 2222
Q ss_pred cCCCCCcEEEEEeCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHHH-CCC--CeEEcCc
Q 003861 601 AGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLKK-AGA--TDAILEN 660 (791)
Q Consensus 601 agi~~a~~viv~~~~---------d--~~n~~----~~~~ar~l~p~~~iiara~~~~~~--~~L~~-~Ga--d~Vi~p~ 660 (791)
.+++||.||++.+- | ..|.. ++..+++.+|+..++.. .|+.+. ..+.+ .|. ++|+---
T Consensus 70 -a~~~aDvVIi~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivv-tNPvd~~t~~~~k~sg~p~~rviG~~ 147 (321)
T 3p7m_A 70 -DLENSDVVIVTAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICI-TNPLDIMVNMLQKFSGVPDNKIVGMA 147 (321)
T ss_dssp -GGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEEC-CSSHHHHHHHHHHHHCCCGGGEEEEC
T ss_pred -HHCCCCEEEEcCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEe-cCchHHHHHHHHHhcCCCHHHEEeec
Confidence 45789999888642 1 34544 34566777888766655 454433 22333 344 4565544
Q ss_pred -HHHHHHHHHHHHhhcCCChHHHH
Q 003861 661 -AETSLQLGSKLLKGFGVMSDDVT 683 (791)
Q Consensus 661 -~~~~~~la~~~l~~l~~~~~~~~ 683 (791)
.+-..|+-..+-+.+|+++..++
T Consensus 148 ~~LD~~R~~~~la~~l~v~~~~v~ 171 (321)
T 3p7m_A 148 GVLDSARFRTFLADELNVSVQQVQ 171 (321)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred cchHHHHHHHHHHHHhCcCHHHce
Confidence 33345555666667777775543
No 184
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=93.43 E-value=0.18 Score=53.22 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=53.3
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-------CCCEEEccCCCHHHHHhcC
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-------GFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-------~~~~v~GD~t~~~~L~~ag 602 (791)
..+++.|+|.|.+|..+|..|. .|++|++.|.+++..+++.+. +..+ . ++. + +
T Consensus 11 ~~~~V~vIG~G~MG~~iA~~la-----------aG~~V~v~d~~~~~~~~~~~~l~~~~~~~i~~-~---~~~---~-~- 70 (293)
T 1zej_A 11 HHMKVFVIGAGLMGRGIAIAIA-----------SKHEVVLQDVSEKALEAAREQIPEELLSKIEF-T---TTL---E-K- 70 (293)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-----------TTSEEEEECSCHHHHHHHHHHSCGGGGGGEEE-E---SSC---T-T-
T ss_pred CCCeEEEEeeCHHHHHHHHHHH-----------cCCEEEEEECCHHHHHHHHHHHHHHHhCCeEE-e---CCH---H-H-
Confidence 4668999999999999999993 699999999999999988765 1111 1 121 2 2
Q ss_pred CCCCcEEEEEeCCHHH
Q 003861 603 ITSPKAVMIMYTDKKR 618 (791)
Q Consensus 603 i~~a~~viv~~~~d~~ 618 (791)
+++||.||.+.+++.+
T Consensus 71 ~~~aDlVieavpe~~~ 86 (293)
T 1zej_A 71 VKDCDIVMEAVFEDLN 86 (293)
T ss_dssp GGGCSEEEECCCSCHH
T ss_pred HcCCCEEEEcCcCCHH
Confidence 6789999999998753
No 185
>1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A*
Probab=93.38 E-value=0.39 Score=51.22 Aligned_cols=138 Identities=13% Similarity=0.103 Sum_probs=83.5
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCC-------cEEEEcCCh--hhH----HHHHhcCCCEEEccCCCHHH
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGW-------PFVAFDLNP--SVV----KESRKLGFPILYGDASRPAV 597 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~-------~vvvID~d~--~~v----~~~~~~~~~~v~GD~t~~~~ 597 (791)
.+++|.|. |.+|+.++..|. +.|+ +++++|.++ ++. .++.+..+.++ +|.++.+.
T Consensus 5 mkVlVtGaaGfIG~~l~~~L~----------~~g~~~~~~~~ev~l~D~~~~~~~~~g~~~dl~~~~~~~~-~di~~~~~ 73 (327)
T 1y7t_A 5 VRVAVTGAAGQIGYSLLFRIA----------AGEMLGKDQPVILQLLEIPQAMKALEGVVMELEDCAFPLL-AGLEATDD 73 (327)
T ss_dssp EEEEESSTTSHHHHHHHHHHH----------TTTTTCTTCCEEEEEECCGGGHHHHHHHHHHHHTTTCTTE-EEEEEESC
T ss_pred CEEEEECCCCHHHHHHHHHHH----------hCCCCCCCCCCEEEEEeCCCchhhccchhhhhhccccccc-CCeEeccC
Confidence 36999997 999999999998 5665 899999875 222 22333334444 67765444
Q ss_pred HHhcCCCCCcEEEEEeCC---------H--HHHHHH----HHHHHHhC-CCCcEEEEecChhh--HHHHHHC----CCCe
Q 003861 598 LLSAGITSPKAVMIMYTD---------K--KRTIEA----VQRLRLAF-PAIPIYARAQDMMH--LLDLKKA----GATD 655 (791)
Q Consensus 598 L~~agi~~a~~viv~~~~---------d--~~n~~~----~~~ar~l~-p~~~iiara~~~~~--~~~L~~~----Gad~ 655 (791)
+.++ ++++|.|+.+.+. | +.|+.. +..+++.. |+.+++.- .++.+ .....+. ..+.
T Consensus 74 ~~~a-~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~-snp~~~~~~~~~~~~~~~~p~~ 151 (327)
T 1y7t_A 74 PKVA-FKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVV-GNPANTNALIAYKNAPGLNPRN 151 (327)
T ss_dssp HHHH-TTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHHHHHHHHHTCTTSCGGG
T ss_pred hHHH-hCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEe-CCchhhhHHHHHHHcCCCChhh
Confidence 4433 4679988876531 1 346554 45666765 77665553 34442 2223332 1344
Q ss_pred EEcCcHHHHHHHHHHHHhhcCCChHHH
Q 003861 656 AILENAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 656 Vi~p~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
++--....+.++...+-+.+|+++..+
T Consensus 152 ~yg~tkl~~er~~~~~a~~~g~~~~~v 178 (327)
T 1y7t_A 152 FTAMTRLDHNRAKAQLAKKTGTGVDRI 178 (327)
T ss_dssp EEECCHHHHHHHHHHHHHHHTCCGGGE
T ss_pred eeccchHHHHHHHHHHHHHhCcChhhe
Confidence 566666666776666666666666443
No 186
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=93.37 E-value=0.16 Score=54.71 Aligned_cols=109 Identities=17% Similarity=0.020 Sum_probs=71.9
Q ss_pred CCEEEeCCChhHH-HHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQ-VLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~-~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
-++.|+|+|.+|+ ..++.|.+ ..+.+++ +.|.|+++.+.+.+ .|.+.+ .| -++.+++ .+.|+
T Consensus 28 ~rigiIG~G~~g~~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~a~~~g~~~~-~~--~~~ll~~---~~~D~ 92 (350)
T 3rc1_A 28 IRVGVIGCADIAWRRALPALEA---------EPLTEVTAIASRRWDRAKRFTERFGGEPV-EG--YPALLER---DDVDA 92 (350)
T ss_dssp EEEEEESCCHHHHHTHHHHHHH---------CTTEEEEEEEESSHHHHHHHHHHHCSEEE-ES--HHHHHTC---TTCSE
T ss_pred eEEEEEcCcHHHHHHHHHHHHh---------CCCeEEEEEEcCCHHHHHHHHHHcCCCCc-CC--HHHHhcC---CCCCE
Confidence 4799999999998 68888872 4477776 66999999887654 577654 22 2334432 57899
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEc
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAIL 658 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~ 658 (791)
|+++++++. -...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+.
T Consensus 93 V~i~tp~~~-h~~~~~~al~aG--k~Vl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 146 (350)
T 3rc1_A 93 VYVPLPAVL-HAEWIDRALRAG--KHVLAEKPLTTDRPQAERLFAVARERGLLLMEN 146 (350)
T ss_dssp EEECCCGGG-HHHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHTTCCEEEE
T ss_pred EEECCCcHH-HHHHHHHHHHCC--CcEEEeCCCCCCHHHHHHHHHHHHHhCCEEEEE
Confidence 999998764 344555555554 467773 4455554444 5567665443
No 187
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=93.35 E-value=0.5 Score=50.50 Aligned_cols=135 Identities=18% Similarity=0.234 Sum_probs=82.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHH----HHHhc------CCCEEEccCCCHHHHH
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVK----ESRKL------GFPILYGDASRPAVLL 599 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~----~~~~~------~~~~v~GD~t~~~~L~ 599 (791)
..++.|+|.|.+|..++..|. ..|. +++++|.|+++++ ++.+. ...+. +. +|.+
T Consensus 7 ~~kI~viGaG~vG~~~a~~l~----------~~~~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~-~t-~d~~--- 71 (324)
T 3gvi_A 7 RNKIALIGSGMIGGTLAHLAG----------LKELGDVVLFDIAEGTPQGKGLDIAESSPVDGFDAKFT-GA-NDYA--- 71 (324)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCCEEEEECSSSSHHHHHHHHHHHHHHHHTCCCCEE-EE-SSGG---
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCeEEEEeCCchhHHHHHHHHhchhhhcCCCCEEE-Ee-CCHH---
Confidence 347999999999999999997 5666 9999999998754 23221 23333 21 1222
Q ss_pred hcCCCCCcEEEEEeCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhHH--HHHH-CCC--CeEEcC
Q 003861 600 SAGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHLL--DLKK-AGA--TDAILE 659 (791)
Q Consensus 600 ~agi~~a~~viv~~~~---------d--~~n~~----~~~~ar~l~p~~~iiara~~~~~~~--~L~~-~Ga--d~Vi~p 659 (791)
.+++||.||++.+- | ..|.. ++..+++.+|+..++.- .|+.+.- .+.+ .|. ++|+--
T Consensus 72 --a~~~aDiVIiaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivv-tNPvd~~t~~~~k~sg~p~~rviG~ 148 (324)
T 3gvi_A 72 --AIEGADVVIVTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICI-TNPLDAMVWALQKFSGLPAHKVVGM 148 (324)
T ss_dssp --GGTTCSEEEECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEEC-CSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred --HHCCCCEEEEccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEec-CCCcHHHHHHHHHhcCCCHHHEEee
Confidence 45789999888642 2 34544 34566677888655544 4554432 2333 354 456644
Q ss_pred c-HHHHHHHHHHHHhhcCCChHHHH
Q 003861 660 N-AETSLQLGSKLLKGFGVMSDDVT 683 (791)
Q Consensus 660 ~-~~~~~~la~~~l~~l~~~~~~~~ 683 (791)
- .+-..|+-..+-+.+|+++..++
T Consensus 149 ~~~LD~~R~~~~la~~lgv~~~~v~ 173 (324)
T 3gvi_A 149 AGVLDSARFRYFLSEEFNVSVEDVT 173 (324)
T ss_dssp CHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred cCccHHHHHHHHHHHHhCcCHHHCe
Confidence 4 23345555566666777775543
No 188
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=93.30 E-value=0.6 Score=42.11 Aligned_cols=97 Identities=16% Similarity=0.223 Sum_probs=67.7
Q ss_pred CCCcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEE
Q 003861 563 VGWPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR 638 (791)
Q Consensus 563 ~g~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiar 638 (791)
....++++|.|+...+.+ ++.|+.+... .+-.+.++.+.-...|.+++-.-.+......+..+|+.+|++++++-
T Consensus 3 ~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~~~~~~g~~~~~~l~~~~~~~pii~l 81 (142)
T 2qxy_A 3 LTPTVMVVDESRITFLAVKNALEKDGFNVIWA-KNEQEAFTFLRREKIDLVFVDVFEGEESLNLIRRIREEFPDTKVAVL 81 (142)
T ss_dssp CCCEEEEECSCHHHHHHHHHHHGGGTCEEEEE-SSHHHHHHHHTTSCCSEEEEECTTTHHHHHHHHHHHHHCTTCEEEEE
T ss_pred CCCeEEEEeCCHHHHHHHHHHHHhCCCEEEEE-CCHHHHHHHHhccCCCEEEEeCCCCCcHHHHHHHHHHHCCCCCEEEE
Confidence 345788999988765443 3467776643 33456777777778998888772234567788899999998998776
Q ss_pred ecC--hhhHHHHHHCCCCeEEcCc
Q 003861 639 AQD--MMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 639 a~~--~~~~~~L~~~Gad~Vi~p~ 660 (791)
..+ .+......+.|++.++.-.
T Consensus 82 s~~~~~~~~~~~~~~g~~~~l~kP 105 (142)
T 2qxy_A 82 SAYVDKDLIINSVKAGAVDYILKP 105 (142)
T ss_dssp ESCCCHHHHHHHHHHTCSCEEESS
T ss_pred ECCCCHHHHHHHHHCCcceeEeCC
Confidence 654 4446667889999876543
No 189
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=93.19 E-value=0.16 Score=54.20 Aligned_cols=110 Identities=11% Similarity=0.028 Sum_probs=71.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCH-HHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRP-AVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~-~~L~~agi~~a~~ 608 (791)
-++.|+|+|.+|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+....+ +|. +.+++ .++|+
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~~~~~~~~~~~---~~~~~ll~~---~~~D~ 70 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRE---------SAQAEVRGIASRRLENAQKMAKELAIPVAY---GSYEELCKD---ETIDI 70 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHH---------SSSEEEEEEBCSSSHHHHHHHHHTTCCCCB---SSHHHHHHC---TTCSE
T ss_pred EEEEEECchHHHHHHHHHHHh---------CCCcEEEEEEeCCHHHHHHHHHHcCCCcee---CCHHHHhcC---CCCCE
Confidence 379999999999999999972 3577777 66999999887654 4543233 333 34432 57899
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEcC
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAILE 659 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~p 659 (791)
|+++++++. -...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+..
T Consensus 71 V~i~tp~~~-h~~~~~~al~~g--k~vl~EKP~~~~~~e~~~l~~~a~~~g~~~~v~~ 125 (330)
T 3e9m_A 71 IYIPTYNQG-HYSAAKLALSQG--KPVLLEKPFTLNAAEAEELFAIAQEQGVFLMEAQ 125 (330)
T ss_dssp EEECCCGGG-HHHHHHHHHHTT--CCEEECSSCCSSHHHHHHHHHHHHHTTCCEEECC
T ss_pred EEEcCCCHH-HHHHHHHHHHCC--CeEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEE
Confidence 999998764 344455555554 467762 3454544443 55676555433
No 190
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=93.17 E-value=0.052 Score=57.74 Aligned_cols=72 Identities=19% Similarity=0.273 Sum_probs=54.1
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHH-Hh-cCCCEEEccCCCHHHHHhcCCC--CC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKES-RK-LGFPILYGDASRPAVLLSAGIT--SP 606 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~-~~-~~~~~v~GD~t~~~~L~~agi~--~a 606 (791)
.+++|.|. |.+|+.+++.|. +.|++|++++.+++...+. .+ .+..++.+|.+|++.++++ ++ ++
T Consensus 21 ~~vlVTGasG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~-~~~~~~ 89 (330)
T 2pzm_A 21 MRILITGGAGCLGSNLIEHWL----------PQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERA-FDSFKP 89 (330)
T ss_dssp CEEEEETTTSHHHHHHHHHHG----------GGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHH-HHHHCC
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHH-HhhcCC
Confidence 46888887 999999999998 7899999999865432111 11 3567899999999987764 23 68
Q ss_pred cEEEEEeC
Q 003861 607 KAVMIMYT 614 (791)
Q Consensus 607 ~~viv~~~ 614 (791)
|+||-+.+
T Consensus 90 D~vih~A~ 97 (330)
T 2pzm_A 90 THVVHSAA 97 (330)
T ss_dssp SEEEECCC
T ss_pred CEEEECCc
Confidence 88877654
No 191
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=93.09 E-value=0.15 Score=53.78 Aligned_cols=35 Identities=31% Similarity=0.674 Sum_probs=31.8
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhh
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV 576 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~ 576 (791)
+++.|+| .|.+|..+++.|. +.|++|+++|.+++.
T Consensus 22 ~~I~iIGg~G~mG~~la~~l~----------~~G~~V~~~~~~~~~ 57 (298)
T 2pv7_A 22 HKIVIVGGYGKLGGLFARYLR----------ASGYPISILDREDWA 57 (298)
T ss_dssp CCEEEETTTSHHHHHHHHHHH----------TTTCCEEEECTTCGG
T ss_pred CEEEEEcCCCHHHHHHHHHHH----------hCCCeEEEEECCccc
Confidence 4799999 9999999999998 889999999998763
No 192
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=93.04 E-value=0.17 Score=53.82 Aligned_cols=108 Identities=11% Similarity=0.047 Sum_probs=67.8
Q ss_pred CEEEeCCChhHHHH-HHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCH-HHHHhcCCCCCcE
Q 003861 533 PVVIVGFGQMGQVL-ANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRP-AVLLSAGITSPKA 608 (791)
Q Consensus 533 ~viI~G~G~~G~~l-a~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~-~~L~~agi~~a~~ 608 (791)
++.|+|+|.+|+.. ++.|. +.+.+++ +.|.|+++.+.+.+ .+....+ +|. +.+++ .++|+
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~----------~~~~~~vav~d~~~~~~~~~~~~~g~~~~~---~~~~~~l~~---~~~D~ 65 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIR----------ATGGEVVSMMSTSAERGAAYATENGIGKSV---TSVEELVGD---PDVDA 65 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHH----------HTTCEEEEEECSCHHHHHHHHHHTTCSCCB---SCHHHHHTC---TTCCE
T ss_pred eEEEEcccHHHHHhhhHHhh----------cCCCeEEEEECCCHHHHHHHHHHcCCCccc---CCHHHHhcC---CCCCE
Confidence 47899999999998 88887 4667766 67999999877654 4543222 333 33432 47899
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEcC
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAILE 659 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~p 659 (791)
|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|+...+..
T Consensus 66 V~i~tp~~~h-~~~~~~al~~G--k~v~~ekP~~~~~~~~~~l~~~a~~~g~~~~~~~ 120 (332)
T 2glx_A 66 VYVSTTNELH-REQTLAAIRAG--KHVLCEKPLAMTLEDAREMVVAAREAGVVLGTNH 120 (332)
T ss_dssp EEECSCGGGH-HHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred EEEeCChhHh-HHHHHHHHHCC--CeEEEeCCCcCCHHHHHHHHHHHHHcCCEEEEee
Confidence 9999987543 33444444433 466663 2344443333 45677765543
No 193
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=93.00 E-value=0.057 Score=58.17 Aligned_cols=65 Identities=15% Similarity=0.210 Sum_probs=48.8
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCH-HHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~-~~L~~agi~~a~~vi 610 (791)
+.+.|+|+|++|+.+|+.|+ ..|.+|++.|.+++. +.+.+.|... .+. +.+ +++|.|+
T Consensus 166 ~tvgIIGlG~IG~~vA~~l~----------~~G~~V~~~d~~~~~-~~~~~~g~~~-----~~l~ell-----~~aDvV~ 224 (335)
T 2g76_A 166 KTLGILGLGRIGREVATRMQ----------SFGMKTIGYDPIISP-EVSASFGVQQ-----LPLEEIW-----PLCDFIT 224 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------TTTCEEEEECSSSCH-HHHHHTTCEE-----CCHHHHG-----GGCSEEE
T ss_pred CEEEEEeECHHHHHHHHHHH----------HCCCEEEEECCCcch-hhhhhcCcee-----CCHHHHH-----hcCCEEE
Confidence 46999999999999999998 899999999998766 3445555532 133 333 4688888
Q ss_pred EEeCCHH
Q 003861 611 IMYTDKK 617 (791)
Q Consensus 611 v~~~~d~ 617 (791)
++.+..+
T Consensus 225 l~~P~t~ 231 (335)
T 2g76_A 225 VHTPLLP 231 (335)
T ss_dssp ECCCCCT
T ss_pred EecCCCH
Confidence 8887654
No 194
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=92.98 E-value=0.069 Score=58.50 Aligned_cols=74 Identities=19% Similarity=0.171 Sum_probs=54.5
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
.++++|+|.|++|+.+++.+. ..|.+|+++|.++++.+.+++ .|..+.. +.++.+.++++ +.++|.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a~----------~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~-~~~~~~~l~~~-l~~aDvV 235 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIAN----------GMGATVTVLDINIDKLRQLDAEFCGRIHT-RYSSAYELEGA-VKRADLV 235 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHTTTSSEE-EECCHHHHHHH-HHHCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHHhcCCeeEe-ccCCHHHHHHH-HcCCCEE
Confidence 457999999999999999998 889999999999999888776 4544322 22333334332 3479988
Q ss_pred EEEeCCH
Q 003861 610 MIMYTDK 616 (791)
Q Consensus 610 iv~~~~d 616 (791)
+.++..+
T Consensus 236 i~~~~~p 242 (377)
T 2vhw_A 236 IGAVLVP 242 (377)
T ss_dssp EECCCCT
T ss_pred EECCCcC
Confidence 8877543
No 195
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=92.97 E-value=0.15 Score=51.79 Aligned_cols=73 Identities=21% Similarity=0.276 Sum_probs=56.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcC------C
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAG------I 603 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~ag------i 603 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++..+ .+..++.+|.+|++.++++= .
T Consensus 6 k~vlVTGas~giG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 75 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFA----------KEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL 75 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHc
Confidence 45777776 789999999998 889999999999988776654 36788899999998776531 1
Q ss_pred CCCcEEEEEeC
Q 003861 604 TSPKAVMIMYT 614 (791)
Q Consensus 604 ~~a~~viv~~~ 614 (791)
.+.|.+|-..+
T Consensus 76 g~id~lvn~Ag 86 (245)
T 1uls_A 76 GRLDGVVHYAG 86 (245)
T ss_dssp SSCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 35787776543
No 196
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=92.95 E-value=0.12 Score=52.46 Aligned_cols=72 Identities=17% Similarity=0.199 Sum_probs=56.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhc--CCCCCc
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSA--GITSPK 607 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~a--gi~~a~ 607 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+++.+. ....+.+|.+|++.++++ ...+.|
T Consensus 7 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id 76 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFA----------REGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLD 76 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCS
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCC
Confidence 45777776 789999999998 8899999999999877655432 467789999999988754 245788
Q ss_pred EEEEEe
Q 003861 608 AVMIMY 613 (791)
Q Consensus 608 ~viv~~ 613 (791)
.+|-..
T Consensus 77 ~lv~~A 82 (246)
T 2ag5_A 77 VLFNVA 82 (246)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 887554
No 197
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=92.93 E-value=0.37 Score=51.33 Aligned_cols=107 Identities=17% Similarity=0.176 Sum_probs=71.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCHH-HHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPA-VLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~~-~L~~agi~~a~~ 608 (791)
-++.|+|+|.+|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+.+ + +|.+ .+++ .++|+
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~~~~~~~~--~---~~~~~~l~~---~~~D~ 66 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSG---------NADARLVAVADAFPAAAEAIAGAYGCE--V---RTIDAIEAA---ADIDA 66 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---------CTTEEEEEEECSSHHHHHHHHHHTTCE--E---CCHHHHHHC---TTCCE
T ss_pred eEEEEECCCHHHHHHHHHHhh---------CCCcEEEEEECCCHHHHHHHHHHhCCC--c---CCHHHHhcC---CCCCE
Confidence 368999999999999999972 3577777 68999999887754 4554 3 4444 4432 47899
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEc
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAIL 658 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~ 658 (791)
|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+.
T Consensus 67 V~i~tp~~~h-~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v~ 120 (331)
T 4hkt_A 67 VVICTPTDTH-ADLIERFARAG--KAIFCEKPIDLDAERVRACLKVVSDTKAKLMVG 120 (331)
T ss_dssp EEECSCGGGH-HHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred EEEeCCchhH-HHHHHHHHHcC--CcEEEecCCCCCHHHHHHHHHHHHHcCCeEEEc
Confidence 9999987543 44455555544 467763 4455554443 5667766554
No 198
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=92.91 E-value=0.57 Score=50.08 Aligned_cols=134 Identities=15% Similarity=0.128 Sum_probs=80.2
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHH----HHHhc-----CCCEEEccCCCHHHH
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVK----ESRKL-----GFPILYGDASRPAVL 598 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~----~~~~~-----~~~~v~GD~t~~~~L 598 (791)
...++.|+|.|.+|..++..|. ..|. +++++|.++++++ ++.+. ...+..+ +.
T Consensus 8 ~~~kV~ViGaG~vG~~~a~~l~----------~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~i~~~---~~--- 71 (326)
T 3vku_A 8 DHQKVILVGDGAVGSSYAYAMV----------LQGIAQEIGIVDIFKDKTKGDAIDLEDALPFTSPKKIYSA---EY--- 71 (326)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC---CG---
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------hCCCCCeEEEEeCChHHHHHHHhhHhhhhhhcCCcEEEEC---cH---
Confidence 3558999999999999999997 4555 8999999998765 33321 1222222 22
Q ss_pred HhcCCCCCcEEEEEeCC---------H--HHHH----HHHHHHHHhCCCCcEEEEecChhhHH--HHHH-CCC--CeEEc
Q 003861 599 LSAGITSPKAVMIMYTD---------K--KRTI----EAVQRLRLAFPAIPIYARAQDMMHLL--DLKK-AGA--TDAIL 658 (791)
Q Consensus 599 ~~agi~~a~~viv~~~~---------d--~~n~----~~~~~ar~l~p~~~iiara~~~~~~~--~L~~-~Ga--d~Vi~ 658 (791)
..+++||.+|++.+. | +.|. .++..+++..|+..++. +.||.+.- .+.+ .|. ++|+-
T Consensus 72 --~a~~~aDiVvi~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilv-vtNPvdi~t~~~~k~~g~p~~rviG 148 (326)
T 3vku_A 72 --SDAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLV-AANPVDILTYATWKLSGFPKNRVVG 148 (326)
T ss_dssp --GGGTTCSEEEECCCCC----------------CHHHHHHHHHTTTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGEEE
T ss_pred --HHhcCCCEEEECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEE-ccCchHHHHHHHHHhcCCCHHHeee
Confidence 246889988887642 2 2354 34566677788865444 45655432 2333 343 45655
Q ss_pred C-cHHHHHHHHHHHHhhcCCChHHH
Q 003861 659 E-NAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 659 p-~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
- ..+-..|+-..+-+.+|+++..+
T Consensus 149 ~gt~LD~~R~~~~la~~lgv~~~~V 173 (326)
T 3vku_A 149 SGTSLDTARFRQSIAKMVNVDARSV 173 (326)
T ss_dssp CTTHHHHHHHHHHHHHHHTSCGGGE
T ss_pred ecccCcHHHHHHHHHHHhCCCHHHC
Confidence 3 33334455556666667777543
No 199
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=92.82 E-value=0.18 Score=51.64 Aligned_cols=87 Identities=9% Similarity=0.093 Sum_probs=55.5
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCC----CcEEEEcCChhhHHHHHhcCCCEEEccCCCH-HHHHhcCCCCC
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG----WPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSP 606 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g----~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~-~~L~~agi~~a 606 (791)
.++.|+|+|.+|..+++.|. +.| ++|.+.|.++++ .|..+ .++. +.+ +++
T Consensus 5 m~i~iiG~G~mG~~~a~~l~----------~~g~~~~~~v~~~~~~~~~------~g~~~----~~~~~~~~-----~~~ 59 (262)
T 2rcy_A 5 IKLGFMGLGQMGSALAHGIA----------NANIIKKENLFYYGPSKKN------TTLNY----MSSNEELA-----RHC 59 (262)
T ss_dssp SCEEEECCSHHHHHHHHHHH----------HHTSSCGGGEEEECSSCCS------SSSEE----CSCHHHHH-----HHC
T ss_pred CEEEEECcCHHHHHHHHHHH----------HCCCCCCCeEEEEeCCccc------CceEE----eCCHHHHH-----hcC
Confidence 36999999999999999998 677 799999999876 24322 2233 333 368
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhh
Q 003861 607 KAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMH 644 (791)
Q Consensus 607 ~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~ 644 (791)
|.|++++..+. ...+...++...++..++.-.+.-..
T Consensus 60 D~vi~~v~~~~-~~~v~~~l~~~l~~~~vv~~~~gi~~ 96 (262)
T 2rcy_A 60 DIIVCAVKPDI-AGSVLNNIKPYLSSKLLISICGGLNI 96 (262)
T ss_dssp SEEEECSCTTT-HHHHHHHSGGGCTTCEEEECCSSCCH
T ss_pred CEEEEEeCHHH-HHHHHHHHHHhcCCCEEEEECCCCCH
Confidence 98999888642 22233333333344345554454433
No 200
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=92.82 E-value=0.096 Score=54.19 Aligned_cols=74 Identities=18% Similarity=0.130 Sum_probs=58.3
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcC------C
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAG------I 603 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~ag------i 603 (791)
.+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+...+.....+.+|.+|++.++++- .
T Consensus 16 ~k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (266)
T 3p19_A 16 KKLVVITGASSGIGEAIARRFS----------EEGHPLLLLARRVERLKALNLPNTLCAQVDVTDKYTFDTAITRAEKIY 85 (266)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH----------HTTCCEEEEESCHHHHHTTCCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHhhcCCceEEEecCCCHHHHHHHHHHHHHHC
Confidence 345777776 789999999998 89999999999999888776667788999999998776531 1
Q ss_pred CCCcEEEEEeC
Q 003861 604 TSPKAVMIMYT 614 (791)
Q Consensus 604 ~~a~~viv~~~ 614 (791)
.+.|.+|-..+
T Consensus 86 g~iD~lvnnAg 96 (266)
T 3p19_A 86 GPADAIVNNAG 96 (266)
T ss_dssp CSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36787766543
No 201
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=92.78 E-value=0.42 Score=51.14 Aligned_cols=107 Identities=15% Similarity=0.159 Sum_probs=68.8
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCHH-HHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPA-VLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~~-~L~~agi~~a~~ 608 (791)
-++.|+|+|.+|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+.. .+ +|.+ .++ -.++|+
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~a~~~g~~-~~---~~~~~~l~---~~~~D~ 68 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAA---------NPDLELVVIADPFIEGAQRLAEANGAE-AV---ASPDEVFA---RDDIDG 68 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHH---------CTTEEEEEEECSSHHHHHHHHHTTTCE-EE---SSHHHHTT---CSCCCE
T ss_pred eEEEEECCcHHHHHHHHHHHh---------CCCcEEEEEECCCHHHHHHHHHHcCCc-ee---CCHHHHhc---CCCCCE
Confidence 369999999999999999972 4477776 78999999887654 4532 23 2333 332 257899
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEE
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAI 657 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi 657 (791)
|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+
T Consensus 69 V~i~tp~~~h-~~~~~~al~~g--k~v~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 121 (344)
T 3euw_A 69 IVIGSPTSTH-VDLITRAVERG--IPALCEKPIDLDIEMVRACKEKIGDGASKVML 121 (344)
T ss_dssp EEECSCGGGH-HHHHHHHHHTT--CCEEECSCSCSCHHHHHHHHHHHGGGGGGEEE
T ss_pred EEEeCCchhh-HHHHHHHHHcC--CcEEEECCCCCCHHHHHHHHHHHHhcCCeEEe
Confidence 9999987543 44455555554 467663 4444544443 444554443
No 202
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=92.72 E-value=0.052 Score=60.32 Aligned_cols=110 Identities=19% Similarity=0.173 Sum_probs=74.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.+.|+|.|+.|+.+++.++ +.|++|+++|.+++... .......+.+|.+|++.+.++- +++|+|+
T Consensus 35 ~~~IlIlG~G~lg~~~~~aa~----------~lG~~v~v~d~~~~~p~--~~~ad~~~~~~~~d~~~l~~~a-~~~D~V~ 101 (419)
T 4e4t_A 35 GAWLGMVGGGQLGRMFCFAAQ----------SMGYRVAVLDPDPASPA--GAVADRHLRAAYDDEAALAELA-GLCEAVS 101 (419)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCTTCHH--HHHSSEEECCCTTCHHHHHHHH-HHCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEECCCCcCch--hhhCCEEEECCcCCHHHHHHHH-hcCCEEE
Confidence 457999999999999999998 89999999998876432 1222346678999999888765 7899876
Q ss_pred EEeCCHHHHHHHHHHHHHh---CCCCcEEEEecChhhHH-HHHHCCCCe
Q 003861 611 IMYTDKKRTIEAVQRLRLA---FPAIPIYARAQDMMHLL-DLKKAGATD 655 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l---~p~~~iiara~~~~~~~-~L~~~Gad~ 655 (791)
...++ .+...+..+.+. .|+...+..+.|....+ .++++|+..
T Consensus 102 ~~~e~--~~~~~~~~l~~~~~vgp~~~a~~~~~dK~~~k~~l~~~Gip~ 148 (419)
T 4e4t_A 102 TEFEN--VPAASLDFLARTTFVAPAGRCVAVAQDRIAEKRFIEASGVPV 148 (419)
T ss_dssp ECCTT--CCHHHHHHHHTTSEESSCHHHHHHHTCHHHHHHHHHHTTCCB
T ss_pred EccCc--CCHHHHHHHHccCCcCCCHHHHHHhcCHHHHHHHHHHcCcCC
Confidence 44333 333333333332 34444555556655544 467788763
No 203
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=92.72 E-value=0.43 Score=51.38 Aligned_cols=110 Identities=16% Similarity=0.194 Sum_probs=71.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
-++.|+|+|.+|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .|.+. .+|.+-+-+ -.++|+|
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~---------~~~~~lvav~d~~~~~~~~~~~~~g~~~----~~~~~~~l~--~~~~D~V 70 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAYTK---------SEKLKLVTCYSRTEDKREKFGKRYNCAG----DATMEALLA--REDVEMV 70 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHTT---------CSSEEEEEEECSSHHHHHHHHHHHTCCC----CSSHHHHHH--CSSCCEE
T ss_pred ceEEEEccCHHHHHHHHHHHh---------CCCcEEEEEECCCHHHHHHHHHHcCCCC----cCCHHHHhc--CCCCCEE
Confidence 479999999999999999971 3477866 66999999887654 46654 344443332 2478999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEcC
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAILE 659 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~p 659 (791)
+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+..
T Consensus 71 ~i~tp~~~h-~~~~~~al~~g--k~vl~EKP~~~~~~~~~~l~~~a~~~~~~~~v~~ 124 (354)
T 3db2_A 71 IITVPNDKH-AEVIEQCARSG--KHIYVEKPISVSLDHAQRIDQVIKETGVKFLCGH 124 (354)
T ss_dssp EECSCTTSH-HHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHHCCCEEEEC
T ss_pred EEeCChHHH-HHHHHHHHHcC--CEEEEccCCCCCHHHHHHHHHHHHHcCCeEEEee
Confidence 999998643 34444454544 467763 3444444443 55566555443
No 204
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=92.70 E-value=0.17 Score=51.85 Aligned_cols=73 Identities=15% Similarity=0.081 Sum_probs=56.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc---CCCEEEccCCCHHHHHhcC-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~---~~~~v~GD~t~~~~L~~ag----- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+...+. ....+.+|.+|++.++++=
T Consensus 13 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~ 82 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALD----------KAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAID 82 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHH
Confidence 45777776 678999999998 8899999999999887765442 5678899999998876541
Q ss_pred -CCCCcEEEEEeC
Q 003861 603 -ITSPKAVMIMYT 614 (791)
Q Consensus 603 -i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 83 ~~g~iD~lv~~Ag 95 (263)
T 3ak4_A 83 ALGGFDLLCANAG 95 (263)
T ss_dssp HHTCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 126787776543
No 205
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=92.68 E-value=0.27 Score=45.70 Aligned_cols=96 Identities=16% Similarity=0.064 Sum_probs=55.5
Q ss_pred CcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCC--CCcEEEEEeCC-HHHHHHHHHHHHHhCCCCcEEE
Q 003861 565 WPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGIT--SPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIYA 637 (791)
Q Consensus 565 ~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~--~a~~viv~~~~-d~~n~~~~~~ar~l~p~~~iia 637 (791)
.+++++|.|+...+.+ ++.|+.++..-.+-.+.++.+.-. +.|.+++-..- +..-..++..+|+.+|+++||+
T Consensus 37 ~~Ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~al~~l~~~~~~~dliilD~~l~~~~g~~~~~~lr~~~~~~~ii~ 116 (157)
T 3hzh_A 37 FNVLIVDDSVFTVKQLTQIFTSEGFNIIDTAADGEEAVIKYKNHYPNIDIVTLXITMPKMDGITCLSNIMEFDKNARVIM 116 (157)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGCCEEEECSSCSSSCHHHHHHHHHHHCTTCCEEE
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCCCCCEEEEeccCCCccHHHHHHHHHhhCCCCcEEE
Confidence 3455555555443322 234444431112223333333223 46766665442 2445678888999999999887
Q ss_pred EecC--hhhHHHHHHCCCCeEEcCc
Q 003861 638 RAQD--MMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 638 ra~~--~~~~~~L~~~Gad~Vi~p~ 660 (791)
-..+ .+......++|++.++.-.
T Consensus 117 ls~~~~~~~~~~~~~~g~~~~l~KP 141 (157)
T 3hzh_A 117 ISALGKEQLVKDCLIKGAKTFIVKP 141 (157)
T ss_dssp EESCCCHHHHHHHHHTTCSEEEESS
T ss_pred EeccCcHHHHHHHHHcCCCEEEeCC
Confidence 7654 6666778899999876543
No 206
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=92.67 E-value=0.15 Score=56.02 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=58.5
Q ss_pred CCCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCC-CcEEEEcCChhhHHHHHh----------cCCCEEEccCCCHHHH
Q 003861 531 SEPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVVKESRK----------LGFPILYGDASRPAVL 598 (791)
Q Consensus 531 ~~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g-~~vvvID~d~~~v~~~~~----------~~~~~v~GD~t~~~~L 598 (791)
.++++|.| .|.+|+.+++.|. +.| ++|+++|.+++....+.+ .++.++.||.+|++.+
T Consensus 35 ~k~vLVTGatG~IG~~l~~~L~----------~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~ 104 (399)
T 3nzo_A 35 QSRFLVLGGAGSIGQAVTKEIF----------KRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYD 104 (399)
T ss_dssp TCEEEEETTTSHHHHHHHHHHH----------TTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHH
T ss_pred CCEEEEEcCChHHHHHHHHHHH----------HCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHH
Confidence 34688888 5999999999998 788 799999999987655433 4678899999999988
Q ss_pred Hhc-CCCCCcEEEEEe
Q 003861 599 LSA-GITSPKAVMIMY 613 (791)
Q Consensus 599 ~~a-gi~~a~~viv~~ 613 (791)
+.+ ...++|.|+-+.
T Consensus 105 ~~~~~~~~~D~Vih~A 120 (399)
T 3nzo_A 105 AFIKADGQYDYVLNLS 120 (399)
T ss_dssp HHHHHCCCCSEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 765 346788887554
No 207
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=92.67 E-value=0.16 Score=51.55 Aligned_cols=73 Identities=16% Similarity=0.145 Sum_probs=54.9
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hc--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KL--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+... +. ...++.+|.+|++.++++-
T Consensus 12 ~~vlVtGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 81 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFA----------TAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADF 81 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------TTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHH
Confidence 45777776 789999999998 88999999999988765433 22 3567789999998877641
Q ss_pred ----CCCCcEEEEEeC
Q 003861 603 ----ITSPKAVMIMYT 614 (791)
Q Consensus 603 ----i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 82 ~~~~~~~~d~vi~~Ag 97 (255)
T 1fmc_A 82 AISKLGKVDILVNNAG 97 (255)
T ss_dssp HHHHHSSCCEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 136787776543
No 208
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=92.62 E-value=0.7 Score=41.54 Aligned_cols=96 Identities=15% Similarity=0.001 Sum_probs=66.1
Q ss_pred CCcEEEEcCChhhHHHHH----hcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC-H--HHHHHHHHHHHHhCCCCcEE
Q 003861 564 GWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-K--KRTIEAVQRLRLAFPAIPIY 636 (791)
Q Consensus 564 g~~vvvID~d~~~v~~~~----~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~-d--~~n~~~~~~ar~l~p~~~ii 636 (791)
...+.++|.|+...+.++ +.|+.+...+ +-.+.++.+.-...|.+++-..- + ..-...+..+|+.+|+++++
T Consensus 6 ~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~l~~~~~dlvi~D~~l~~~~~~g~~~~~~l~~~~~~~~ii 84 (136)
T 3kto_A 6 HPIIYLVDHQKDARAALSKLLSPLDVTIQCFA-SAESFMRQQISDDAIGMIIEAHLEDKKDSGIELLETLVKRGFHLPTI 84 (136)
T ss_dssp -CEEEEECSCHHHHHHHHHHHTTSSSEEEEES-SHHHHTTSCCCTTEEEEEEETTGGGBTTHHHHHHHHHHHTTCCCCEE
T ss_pred CCeEEEEcCCHHHHHHHHHHHHHCCcEEEEeC-CHHHHHHHHhccCCCEEEEeCcCCCCCccHHHHHHHHHhCCCCCCEE
Confidence 457888998887655443 4577666433 34556666666778888776553 2 35577888999999999977
Q ss_pred EEecCh--hhHHHHHHCCCCeEEcCc
Q 003861 637 ARAQDM--MHLLDLKKAGATDAILEN 660 (791)
Q Consensus 637 ara~~~--~~~~~L~~~Gad~Vi~p~ 660 (791)
+-.... +......++|++..+.-.
T Consensus 85 ~~s~~~~~~~~~~~~~~ga~~~l~KP 110 (136)
T 3kto_A 85 VMASSSDIPTAVRAMRASAADFIEKP 110 (136)
T ss_dssp EEESSCCHHHHHHHHHTTCSEEEESS
T ss_pred EEEcCCCHHHHHHHHHcChHHheeCC
Confidence 766544 446667889999877643
No 209
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=92.61 E-value=0.17 Score=56.31 Aligned_cols=71 Identities=25% Similarity=0.372 Sum_probs=54.0
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhc----------
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSA---------- 601 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~a---------- 601 (791)
.++.|+|.|-+|..+|-.|. +.|++|+.+|.|+++++.+.+-..++. ++.-++.++++
T Consensus 22 ~~IaViGlGYVGLp~A~~~A----------~~G~~V~g~Did~~kV~~ln~G~~pi~--Epgl~ell~~~~~~g~l~~tt 89 (444)
T 3vtf_A 22 ASLSVLGLGYVGVVHAVGFA----------LLGHRVVGYDVNPSIVERLRAGRPHIY--EPGLEEALGRALSSGRLSFAE 89 (444)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HHTCEEEEECSCHHHHHHHHTTCCSSC--CTTHHHHHHHHHHTTCEEECS
T ss_pred CEEEEEccCHHHHHHHHHHH----------hCCCcEEEEECCHHHHHHHHCCCCCCC--CCCHHHHHHHHHHcCCeeEEc
Confidence 36899999999999999998 799999999999999999976444432 44444444432
Q ss_pred ----CCCCCcEEEEEeC
Q 003861 602 ----GITSPKAVMIMYT 614 (791)
Q Consensus 602 ----gi~~a~~viv~~~ 614 (791)
.+.++|+++++.+
T Consensus 90 ~~~~ai~~ad~~~I~Vp 106 (444)
T 3vtf_A 90 SAEEAVAATDATFIAVG 106 (444)
T ss_dssp SHHHHHHTSSEEEECCC
T ss_pred CHHHHHhcCCceEEEec
Confidence 1456788888864
No 210
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=92.60 E-value=0.34 Score=51.66 Aligned_cols=134 Identities=16% Similarity=0.184 Sum_probs=81.4
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHH----HHHhcC---CCE-EEccCCCHHHHHh
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVK----ESRKLG---FPI-LYGDASRPAVLLS 600 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~----~~~~~~---~~~-v~GD~t~~~~L~~ 600 (791)
+.++.|+|.|.+|..++-.|. ..+. +++++|.|+++++ ++.+.. .++ +.. ++.
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~----------~~~~~~ev~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~--~~~----- 69 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMA----------LRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYA--GDY----- 69 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHH----------HTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC----CG-----
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEeCChHHHHHHHHHHHHhHHhcCCeEEEE--CCH-----
Confidence 357999999999999999997 4555 8999999987643 222211 011 121 222
Q ss_pred cCCCCCcEEEEEeCCH-----------HHHH----HHHHHHHHhCCCCcEEEEecChhhHH--HH-HHCCC--CeEEcC-
Q 003861 601 AGITSPKAVMIMYTDK-----------KRTI----EAVQRLRLAFPAIPIYARAQDMMHLL--DL-KKAGA--TDAILE- 659 (791)
Q Consensus 601 agi~~a~~viv~~~~d-----------~~n~----~~~~~ar~l~p~~~iiara~~~~~~~--~L-~~~Ga--d~Vi~p- 659 (791)
..+++||.+|++.+-. ..|. .++..+++..|+..++. ..|+-+.- .+ +..|. .+|+--
T Consensus 70 ~a~~~aDvVii~~g~p~k~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~~~~~~k~s~~p~~rviG~g 148 (318)
T 1y6j_A 70 SDVKDCDVIVVTAGANRKPGETRLDLAKKNVMIAKEVTQNIMKYYNHGVILV-VSNPVDIITYMIQKWSGLPVGKVIGSG 148 (318)
T ss_dssp GGGTTCSEEEECCCC------CHHHHHHHHHHHHHHHHHHHHHHCCSCEEEE-CSSSHHHHHHHHHHHHTCCTTTEEECT
T ss_pred HHhCCCCEEEEcCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEE-ecCcHHHHHHHHHHHcCCCHHHEeccC
Confidence 2378999999887642 2333 45566677788877766 56665432 22 33343 367655
Q ss_pred cHHHHHHHHHHHHhhcCCChHHH
Q 003861 660 NAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 660 ~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
...-..++-..+-+.+|+++..+
T Consensus 149 t~Ld~~r~~~~la~~lgv~~~~v 171 (318)
T 1y6j_A 149 TVLDSIRFRYLLSEKLGVDVKNV 171 (318)
T ss_dssp THHHHHHHHHHHHTTTTCCTTTE
T ss_pred CchHHHHHHHHHHHHhCCCHHHe
Confidence 44444666667777778777443
No 211
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=92.60 E-value=0.089 Score=56.60 Aligned_cols=66 Identities=15% Similarity=0.274 Sum_probs=49.8
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
.++.|+|+|++|+.+++.|. ..|.+|++.|.+++. +.+.+.|... + +-++.+ +++|.|++
T Consensus 151 ~~vgIIG~G~iG~~iA~~l~----------~~G~~V~~~d~~~~~-~~~~~~g~~~---~-~l~~~l-----~~aDvVil 210 (334)
T 2dbq_A 151 KTIGIIGLGRIGQAIAKRAK----------GFNMRILYYSRTRKE-EVERELNAEF---K-PLEDLL-----RESDFVVL 210 (334)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCCH-HHHHHHCCEE---C-CHHHHH-----HHCSEEEE
T ss_pred CEEEEEccCHHHHHHHHHHH----------hCCCEEEEECCCcch-hhHhhcCccc---C-CHHHHH-----hhCCEEEE
Confidence 46999999999999999998 789999999999887 5555555432 1 222334 46788888
Q ss_pred EeCCHH
Q 003861 612 MYTDKK 617 (791)
Q Consensus 612 ~~~~d~ 617 (791)
+++...
T Consensus 211 ~vp~~~ 216 (334)
T 2dbq_A 211 AVPLTR 216 (334)
T ss_dssp CCCCCT
T ss_pred CCCCCh
Confidence 887654
No 212
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=92.55 E-value=0.53 Score=50.06 Aligned_cols=134 Identities=15% Similarity=0.229 Sum_probs=81.7
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHH----HHHhc----CCC-EEEccCCCHHHHHhc
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVK----ESRKL----GFP-ILYGDASRPAVLLSA 601 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~----~~~~~----~~~-~v~GD~t~~~~L~~a 601 (791)
++.|+|.|.+|..++..|. ..+. +++++|.++++++ ++.+. +.+ -+.+. .+. .
T Consensus 2 kv~ViGaG~vG~~~a~~l~----------~~~~~~el~l~D~~~~k~~g~a~DL~~~~~~~~~~~~v~~~-~~~-----~ 65 (314)
T 3nep_X 2 KVTVIGAGNVGATVAECVA----------RQDVAKEVVMVDIKDGMPQGKALDMRESSPIHGFDTRVTGT-NDY-----G 65 (314)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HHTCSSEEEEECSSTTHHHHHHHHHHHHHHHHTCCCEEEEE-SSS-----G
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEeCchHHHHHHHHHHhccccccCCCcEEEEC-CCH-----H
Confidence 4789999999999999887 4554 8999999998754 23321 111 23332 222 2
Q ss_pred CCCCCcEEEEEeCCH-----------HHHHHH----HHHHHHhCCCCcEEEEecChhhHHH---HHHCC--CCeEEcCc-
Q 003861 602 GITSPKAVMIMYTDK-----------KRTIEA----VQRLRLAFPAIPIYARAQDMMHLLD---LKKAG--ATDAILEN- 660 (791)
Q Consensus 602 gi~~a~~viv~~~~d-----------~~n~~~----~~~ar~l~p~~~iiara~~~~~~~~---L~~~G--ad~Vi~p~- 660 (791)
.+++||.+|++.+.. ..|..+ +..+++.+|+..+ ..+.||.+.-- .+..| .++|+---
T Consensus 66 a~~~aDvVii~ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~v-ivvtNPvd~~t~~~~k~~g~p~~rviG~~t 144 (314)
T 3nep_X 66 PTEDSDVCIITAGLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTI-IVVANPLDVMTYVAYEASGFPTNRVMGMAG 144 (314)
T ss_dssp GGTTCSEEEECCCC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEE-EECCSSHHHHHHHHHHHHTCCGGGEEECCH
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEE-EecCCchhHHHHHHHHhcCCChHHEEeecC
Confidence 467899998887542 345543 4555666787654 44556554432 23345 34566554
Q ss_pred HHHHHHHHHHHHhhcCCChHHHH
Q 003861 661 AETSLQLGSKLLKGFGVMSDDVT 683 (791)
Q Consensus 661 ~~~~~~la~~~l~~l~~~~~~~~ 683 (791)
.+-..|+-..+-+.+|+++..++
T Consensus 145 ~LD~~R~~~~la~~lgv~~~~v~ 167 (314)
T 3nep_X 145 VLDTGRFRSFIAEELDVSVRDVQ 167 (314)
T ss_dssp HHHHHHHHHHHHHHHTCCGGGEE
T ss_pred chHHHHHHHHHHHHhCcCHHHeE
Confidence 33345666666667788775543
No 213
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=92.55 E-value=0.073 Score=56.62 Aligned_cols=70 Identities=23% Similarity=0.243 Sum_probs=52.6
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhH---HHHHh-----cCCCEEEccCCCHHHHHhcC
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV---KESRK-----LGFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v---~~~~~-----~~~~~v~GD~t~~~~L~~ag 602 (791)
++++|.| .|-+|+.+++.|. ++|++|++++.+++.. +.+.+ .+..++.||.+|++.++++
T Consensus 6 ~~vlVTGatGfIG~~l~~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~- 74 (337)
T 2c29_D 6 ETVCVTGASGFIGSWLVMRLL----------ERGYTVRATVRDPTNVKKVKHLLDLPKAETHLTLWKADLADEGSFDEA- 74 (337)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCTTCHHHHHHHHTSTTHHHHEEEEECCTTSTTTTHHH-
T ss_pred CEEEEECCchHHHHHHHHHHH----------HCCCEEEEEECCcchhHHHHHHHhcccCCCeEEEEEcCCCCHHHHHHH-
Confidence 4688888 7999999999998 7899999888877633 22211 2366889999999887765
Q ss_pred CCCCcEEEEE
Q 003861 603 ITSPKAVMIM 612 (791)
Q Consensus 603 i~~a~~viv~ 612 (791)
++++|+|+-+
T Consensus 75 ~~~~d~Vih~ 84 (337)
T 2c29_D 75 IKGCTGVFHV 84 (337)
T ss_dssp HTTCSEEEEC
T ss_pred HcCCCEEEEe
Confidence 3567877754
No 214
>3h5n_A MCCB protein; ubiquitin-activating enzyme, microcin, protein structure, MCCC7, peptide antibiotics, N-P bond formation, transferase; HET: ATP; 1.90A {Escherichia coli} PDB: 3h5r_A 3h9g_A 3h9j_A* 3h9q_A 3h5a_A
Probab=92.54 E-value=0.32 Score=52.60 Aligned_cols=88 Identities=16% Similarity=0.109 Sum_probs=63.2
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCCh-------------------hhH----HHHHh--cC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNP-------------------SVV----KESRK--LG 584 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~-------------------~~v----~~~~~--~~ 584 (791)
+.+|+|+|.|..|..+++.|. ..|. .++++|.|. .++ +++++ .+
T Consensus 118 ~~~VlvvG~GglGs~va~~La----------~aGvg~i~lvD~D~Ve~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 187 (353)
T 3h5n_A 118 NAKVVILGCGGIGNHVSVILA----------TSGIGEIILIDNDQIENTNLTRQVLFSEDDVGKNKTEVIKRELLKRNSE 187 (353)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HHTCSEEEEEECCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred CCeEEEECCCHHHHHHHHHHH----------hCCCCeEEEECCCcCcccccccccCCChHHCCChHHHHHHHHHHHHCCC
Confidence 568999999999999999998 6777 689999874 122 22332 22
Q ss_pred --CCEEEccCCCHHHHHhcCCCCCcEEEEEeCCHH-HHHHHHHHHHHhC
Q 003861 585 --FPILYGDASRPAVLLSAGITSPKAVMIMYTDKK-RTIEAVQRLRLAF 630 (791)
Q Consensus 585 --~~~v~GD~t~~~~L~~agi~~a~~viv~~~~d~-~n~~~~~~ar~l~ 630 (791)
+..+..+.++++.+.+ ++++|.||.++++.+ .-..+-..+++.+
T Consensus 188 v~v~~~~~~i~~~~~~~~--~~~~DlVvd~~Dn~~~~r~~ln~~c~~~~ 234 (353)
T 3h5n_A 188 ISVSEIALNINDYTDLHK--VPEADIWVVSADHPFNLINWVNKYCVRAN 234 (353)
T ss_dssp SEEEEEECCCCSGGGGGG--SCCCSEEEECCCCSTTHHHHHHHHHHHTT
T ss_pred CeEEEeecccCchhhhhH--hccCCEEEEecCChHHHHHHHHHHHHHhC
Confidence 3355566666654555 899999988888766 5556666777765
No 215
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=92.52 E-value=0.17 Score=53.90 Aligned_cols=73 Identities=19% Similarity=0.080 Sum_probs=54.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCCh----------hhHHHHHh---cCCCEEEccCCCHHH
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP----------SVVKESRK---LGFPILYGDASRPAV 597 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~----------~~v~~~~~---~~~~~v~GD~t~~~~ 597 (791)
++++|.|. |-+|+.+++.|. +.|++|+++|.++ +..+++.+ .+..++.+|.+|++.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~ 72 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELL----------EAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGA 72 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHH----------HTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHH
Confidence 46888875 999999999998 7899999998643 33444432 467889999999988
Q ss_pred HHhcCC-CCCcEEEEEeC
Q 003861 598 LLSAGI-TSPKAVMIMYT 614 (791)
Q Consensus 598 L~~agi-~~a~~viv~~~ 614 (791)
++++=- .++|+||-+.+
T Consensus 73 ~~~~~~~~~~d~vih~A~ 90 (348)
T 1ek6_A 73 LQRLFKKYSFMAVIHFAG 90 (348)
T ss_dssp HHHHHHHCCEEEEEECCS
T ss_pred HHHHHHhcCCCEEEECCC
Confidence 876411 16888877654
No 216
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=92.52 E-value=0.27 Score=52.21 Aligned_cols=107 Identities=18% Similarity=0.158 Sum_probs=67.6
Q ss_pred CEEEeCCChhHH-HHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 533 PVVIVGFGQMGQ-VLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 533 ~viI~G~G~~G~-~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
++.|+|+|.+|+ ..++.|.+ ..+.++++.|.|+++.+++.+ .+.+..+.| +.+.| -+++|+|+
T Consensus 4 ~igiIG~G~ig~~~~~~~l~~---------~~~~~l~v~d~~~~~~~~~a~~~g~~~~~~~--~~~~l----~~~~D~V~ 68 (323)
T 1xea_A 4 KIAMIGLGDIAQKAYLPVLAQ---------WPDIELVLCTRNPKVLGTLATRYRVSATCTD--YRDVL----QYGVDAVM 68 (323)
T ss_dssp EEEEECCCHHHHHTHHHHHTT---------STTEEEEEECSCHHHHHHHHHHTTCCCCCSS--TTGGG----GGCCSEEE
T ss_pred EEEEECCCHHHHHHHHHHHHh---------CCCceEEEEeCCHHHHHHHHHHcCCCccccC--HHHHh----hcCCCEEE
Confidence 589999999998 48898861 346788899999999887654 455432222 23344 25799999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHH----HHHCCCCeEE
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLD----LKKAGATDAI 657 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~----L~~~Gad~Vi 657 (791)
++++++.. ...+..+-+.+ .+|++. +.+.+..+. .++.|....+
T Consensus 69 i~tp~~~h-~~~~~~al~~G--k~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~v 119 (323)
T 1xea_A 69 IHAATDVH-STLAAFFLHLG--IPTFVDKPLAASAQECENLYELAEKHHQPLYV 119 (323)
T ss_dssp ECSCGGGH-HHHHHHHHHTT--CCEEEESCSCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EECCchhH-HHHHHHHHHCC--CeEEEeCCCcCCHHHHHHHHHHHHhcCCeEEE
Confidence 99987543 33343343433 456653 234443333 3556776555
No 217
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=92.49 E-value=0.19 Score=51.29 Aligned_cols=72 Identities=17% Similarity=0.240 Sum_probs=54.0
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------------cCCCEEEccCCCHHH
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------------LGFPILYGDASRPAV 597 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------------~~~~~v~GD~t~~~~ 597 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+++.+ ....++.+|.+|++.
T Consensus 8 k~vlITGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 77 (264)
T 2pd6_A 8 ALALVTGAGSGIGRAVSVRLA----------GEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARA 77 (264)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHH
Confidence 45777765 789999999998 789999999999988765532 346788999999987
Q ss_pred HHhc--CC----CCC-cEEEEEe
Q 003861 598 LLSA--GI----TSP-KAVMIMY 613 (791)
Q Consensus 598 L~~a--gi----~~a-~~viv~~ 613 (791)
++++ .+ .+. |.+|-..
T Consensus 78 ~~~~~~~~~~~~g~i~d~vi~~A 100 (264)
T 2pd6_A 78 ARCLLEQVQACFSRPPSVVVSCA 100 (264)
T ss_dssp HHHHHHHHHHHHSSCCSEEEECC
T ss_pred HHHHHHHHHHHhCCCCeEEEECC
Confidence 7654 11 233 7776654
No 218
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=92.47 E-value=0.5 Score=50.33 Aligned_cols=134 Identities=22% Similarity=0.211 Sum_probs=82.9
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHHH-HH---hc---CCC-EEEccCCCHHHHHh
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKE-SR---KL---GFP-ILYGDASRPAVLLS 600 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~~-~~---~~---~~~-~v~GD~t~~~~L~~ 600 (791)
+.++.|+|.|.+|..++-.|. ..+. +++++|.|+++++. +. +. ..+ -+.+| +.+
T Consensus 5 ~~KI~IiGaG~vG~~~a~~l~----------~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~v~~~--~~~---- 68 (318)
T 1ez4_A 5 HQKVVLVGDGAVGSSYAFAMA----------QQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYSG--EYS---- 68 (318)
T ss_dssp BCEEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEEC--CGG----
T ss_pred CCEEEEECCCHHHHHHHHHHH----------cCCCCCEEEEEeCCchHHHHHHHHHHHHHHhcCCeEEEEC--CHH----
Confidence 457999999999999999886 3343 89999999987653 22 21 011 13332 222
Q ss_pred cCCCCCcEEEEEeCCH-----------HHHHHH----HHHHHHhCCCCcEEEEecChhhHH--HHHH-CCCC--eEEcC-
Q 003861 601 AGITSPKAVMIMYTDK-----------KRTIEA----VQRLRLAFPAIPIYARAQDMMHLL--DLKK-AGAT--DAILE- 659 (791)
Q Consensus 601 agi~~a~~viv~~~~d-----------~~n~~~----~~~ar~l~p~~~iiara~~~~~~~--~L~~-~Gad--~Vi~p- 659 (791)
.+++||.||++.+-. ..|..+ +..+++.+|+..++. ..||.+.- .+++ .|.+ +|+--
T Consensus 69 -a~~~aDvVii~ag~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~tNPv~~~t~~~~k~s~~p~~rviG~g 146 (318)
T 1ez4_A 69 -DCKDADLVVITAGAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLV-AANPVDILTYATWKFSGFPKERVIGSG 146 (318)
T ss_dssp -GGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHTTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGEEECT
T ss_pred -HhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-eCCcHHHHHHHHHHHcCCCHHHEEecc
Confidence 268999998887532 244443 455566689877776 56665542 3333 3443 67654
Q ss_pred cHHHHHHHHHHHHhhcCCChHHH
Q 003861 660 NAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 660 ~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
...-..++-..+-+.+|+++..+
T Consensus 147 t~LD~~R~~~~la~~lgv~~~~v 169 (318)
T 1ez4_A 147 TSLDSSRLRVALGKQFNVDPRSV 169 (318)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGE
T ss_pred ccchHHHHHHHHHHHhCcChhHE
Confidence 43434566666666677776544
No 219
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=92.45 E-value=0.54 Score=50.10 Aligned_cols=107 Identities=15% Similarity=0.101 Sum_probs=70.0
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCC---Cc-EEEEcCChhhHHHHH-hcCCCEEEccCCCHHHHHhcCCCCCc
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVG---WP-FVAFDLNPSVVKESR-KLGFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g---~~-vvvID~d~~~v~~~~-~~~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
++.|+|+|.+|+..++.|. +.+ .+ +.+.|.|+++.+++. +.+.+..+.|. ++.|++ .+.|
T Consensus 4 rigiiG~G~ig~~~~~~l~----------~~~~~~~~l~av~d~~~~~a~~~a~~~~~~~~~~~~--~~ll~~---~~vD 68 (334)
T 3ohs_X 4 RWGIVSVGLISSDFTAVLQ----------TLPRSEHQVVAVAARDLSRAKEFAQKHDIPKAYGSY--EELAKD---PNVE 68 (334)
T ss_dssp EEEEECCSHHHHHHHHHHT----------TSCTTTEEEEEEECSSHHHHHHHHHHHTCSCEESSH--HHHHHC---TTCC
T ss_pred EEEEECchHHHHHHHHHHH----------hCCCCCeEEEEEEcCCHHHHHHHHHHcCCCcccCCH--HHHhcC---CCCC
Confidence 6899999999999999986 332 34 445699999987765 45665455433 344443 5789
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEE
Q 003861 608 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAI 657 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi 657 (791)
+|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|.-..+
T Consensus 69 ~V~i~tp~~~H-~~~~~~al~~G--khVl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 122 (334)
T 3ohs_X 69 VAYVGTQHPQH-KAAVMLCLAAG--KAVLCEKPMGVNAAEVREMVTEARSRGLFLME 122 (334)
T ss_dssp EEEECCCGGGH-HHHHHHHHHTT--CEEEEESSSSSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EEEECCCcHHH-HHHHHHHHhcC--CEEEEECCCCCCHHHHHHHHHHHHHhCCEEEE
Confidence 99999987643 44455555554 467774 4455555544 455665443
No 220
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=92.43 E-value=0.15 Score=54.68 Aligned_cols=136 Identities=15% Similarity=0.132 Sum_probs=80.1
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHH-H---h----cCCC-EEEccCCCHHHHHh
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKES-R---K----LGFP-ILYGDASRPAVLLS 600 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~-~---~----~~~~-~v~GD~t~~~~L~~ 600 (791)
+.++.|+|.|.+|..++..|. ..|+ +|+++|.|+++++.. . + .+.. -+.+- +|. ++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la----------~~g~~~V~L~D~~~~~~~~~~~~l~~~~~~~~~~~~i~~t-~d~---~e 74 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCA----------LRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAE-YSY---EA 74 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEE-CSH---HH
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCeEEEEECChhHHHHHHHHHHhhhhccCCCCEEEEe-CCH---HH
Confidence 357999999999999999998 6777 899999999877652 1 1 1111 11110 232 22
Q ss_pred cCCCCCcEEEEEe--CC------------H--HHHH----HHHHHHHHhCCCCcEEEEecChhhH--HHHHHC-C--CCe
Q 003861 601 AGITSPKAVMIMY--TD------------K--KRTI----EAVQRLRLAFPAIPIYARAQDMMHL--LDLKKA-G--ATD 655 (791)
Q Consensus 601 agi~~a~~viv~~--~~------------d--~~n~----~~~~~ar~l~p~~~iiara~~~~~~--~~L~~~-G--ad~ 655 (791)
.+++||.||++. +. | ..|. .++..+++..|+..++ .+.|+.+. ..+.+. | .++
T Consensus 75 -a~~~aDiVi~a~g~p~~~g~~~~~~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi-~~tNP~~~~t~~~~~~~~~~~~r 152 (331)
T 1pzg_A 75 -ALTGADCVIVTAGLTKVPGKPDSEWSRNDLLPFNSKIIREIGQNIKKYCPKTFII-VVTNPLDCMVKVMCEASGVPTNM 152 (331)
T ss_dssp -HHTTCSEEEECCSCSSCTTCCGGGCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEE-ECCSSHHHHHHHHHHHHCCCGGG
T ss_pred -HhCCCCEEEEccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEE-EEcCchHHHHHHHHHhcCCChhc
Confidence 257899999887 21 1 1232 3456666778876554 34555442 233232 3 235
Q ss_pred EEcC-cHHHHHHHHHHHHhhcCCChHHH
Q 003861 656 AILE-NAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 656 Vi~p-~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
|+-- ..+-..++-+.+-+.+|+++..+
T Consensus 153 viG~gt~LD~~R~~~~la~~lgv~~~~v 180 (331)
T 1pzg_A 153 ICGMACMLDSGRFRRYVADALSVSPRDV 180 (331)
T ss_dssp EEECCHHHHHHHHHHHHHHHHTSCGGGE
T ss_pred EEeccchHHHHHHHHHHHHHhCCCHHHc
Confidence 5554 33323455556666667766443
No 221
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=92.43 E-value=0.22 Score=50.72 Aligned_cols=71 Identities=13% Similarity=0.109 Sum_probs=55.2
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc---CCCEEEccCCCHHHHHhc------C
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSA------G 602 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~---~~~~v~GD~t~~~~L~~a------g 602 (791)
.++|.|. |.+|+.+++.|. ++|++|++++.+++..+++.+. ....+.+|.+|++.++++ .
T Consensus 2 ~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 71 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFI----------QQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAE 71 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTT
T ss_pred EEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4677775 789999999998 8899999999999887766542 466788999999887764 1
Q ss_pred CCCCcEEEEEe
Q 003861 603 ITSPKAVMIMY 613 (791)
Q Consensus 603 i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 72 ~g~iD~lvnnA 82 (248)
T 3asu_A 72 WCNIDILVNNA 82 (248)
T ss_dssp TCCCCEEEECC
T ss_pred CCCCCEEEECC
Confidence 23678777644
No 222
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=92.41 E-value=0.47 Score=50.19 Aligned_cols=136 Identities=15% Similarity=0.129 Sum_probs=83.0
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhh---HHHHHhcCCCEEEccCCCHHHHHhcCCCC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSV---VKESRKLGFPILYGDASRPAVLLSAGITS 605 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~---v~~~~~~~~~~v~GD~t~~~~L~~agi~~ 605 (791)
..++.|+|.|.+|..++..+. ..|. +++++|.|++. ..++.+...+-+.+. +| + ..+++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~----------~~g~~~ev~L~Di~~~~~g~a~dl~~~~~~~i~~t-~d---~--~~l~~ 77 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAIS----------AKGIADRLVLLDLSEGTKGATMDLEIFNLPNVEIS-KD---L--SASAH 77 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECCC-----CHHHHHHHTCTTEEEE-SC---G--GGGTT
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hcCCCCEEEEEcCCcchHHHHHHHhhhcCCCeEEe-CC---H--HHHCC
Confidence 357999999999999999887 5667 99999999863 223333222222221 22 2 23689
Q ss_pred CcEEEEEeCC--------H--HHHH----HHHHHHHHhCCCCcEEEEecChhh--HHHHHHC-C--CCeEEcC-cHHHHH
Q 003861 606 PKAVMIMYTD--------K--KRTI----EAVQRLRLAFPAIPIYARAQDMMH--LLDLKKA-G--ATDAILE-NAETSL 665 (791)
Q Consensus 606 a~~viv~~~~--------d--~~n~----~~~~~ar~l~p~~~iiara~~~~~--~~~L~~~-G--ad~Vi~p-~~~~~~ 665 (791)
||.||.+.+- | .+|. .++..+++..|+..++. +.|+.+ ...+++. | .++|+-- ..+-..
T Consensus 78 aD~Vi~aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~sNP~~~~t~~~~~~~~~p~~rviG~gt~Ld~~ 156 (303)
T 2i6t_A 78 SKVVIFTVNSLGSSQSYLDVVQSNVDMFRALVPALGHYSQHSVLLV-ASQPVEIMTYVTWKLSTFPANRVIGIGCNLDSQ 156 (303)
T ss_dssp CSEEEECCCC----CCHHHHHHHHHHHHHHHHHHHHHHTTTCEEEE-CSSSHHHHHHHHHHHHCCCGGGEEECTTHHHHH
T ss_pred CCEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-cCChHHHHHHHHHHhcCCCHHHeeCCCCCchHH
Confidence 9999888621 1 2343 34556666678866555 555443 3334442 3 3467766 454456
Q ss_pred HHHHHHHhhcCCChHHHH
Q 003861 666 QLGSKLLKGFGVMSDDVT 683 (791)
Q Consensus 666 ~la~~~l~~l~~~~~~~~ 683 (791)
++-..+-+.+|+++..++
T Consensus 157 R~~~~la~~lgv~~~~v~ 174 (303)
T 2i6t_A 157 RLQYIITNVLKAQTSGKE 174 (303)
T ss_dssp HHHHHHHHTSCCTTGGGG
T ss_pred HHHHHHHHHcCCChHHeE
Confidence 777777788888876654
No 223
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=92.37 E-value=0.079 Score=49.38 Aligned_cols=105 Identities=13% Similarity=0.162 Sum_probs=65.6
Q ss_pred CCCCEEEeCC----ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCC
Q 003861 530 GSEPVVIVGF----GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITS 605 (791)
Q Consensus 530 ~~~~viI~G~----G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~ 605 (791)
...++.|+|. |++|..+++.|. +.|+++..++.+.+.+ .|.++ +.+ ++++ .+.
T Consensus 13 ~p~~IavIGaS~~~g~~G~~~~~~L~----------~~G~~V~~vnp~~~~i-----~G~~~-~~s------~~el-~~~ 69 (138)
T 1y81_A 13 EFRKIALVGASKNPAKYGNIILKDLL----------SKGFEVLPVNPNYDEI-----EGLKC-YRS------VREL-PKD 69 (138)
T ss_dssp -CCEEEEETCCSCTTSHHHHHHHHHH----------HTTCEEEEECTTCSEE-----TTEEC-BSS------GGGS-CTT
T ss_pred CCCeEEEEeecCCCCCHHHHHHHHHH----------HCCCEEEEeCCCCCeE-----CCeee-cCC------HHHh-CCC
Confidence 3567999999 999999999998 7899866666553322 23221 111 2222 136
Q ss_pred CcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEe--cChhhHHHHHHCCCCeEEcCc
Q 003861 606 PKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARA--QDMMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 606 a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara--~~~~~~~~L~~~Gad~Vi~p~ 660 (791)
+|.++++++ ++.-..++..+.+.+++ .++... .+++-.+..++.|+. ++-|+
T Consensus 70 vDlvii~vp-~~~v~~v~~~~~~~g~~-~i~~~~~~~~~~l~~~a~~~Gi~-~igpn 123 (138)
T 1y81_A 70 VDVIVFVVP-PKVGLQVAKEAVEAGFK-KLWFQPGAESEEIRRFLEKAGVE-YSFGR 123 (138)
T ss_dssp CCEEEECSC-HHHHHHHHHHHHHTTCC-EEEECTTSCCHHHHHHHHHHTCE-EECSC
T ss_pred CCEEEEEeC-HHHHHHHHHHHHHcCCC-EEEEcCccHHHHHHHHHHHCCCE-EEcCC
Confidence 899999988 46666666666666543 244322 244555566777775 55666
No 224
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=92.36 E-value=0.75 Score=49.21 Aligned_cols=137 Identities=14% Similarity=0.035 Sum_probs=84.2
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHHH----HHhc----CCCEEEccCCCHHHHH
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKE----SRKL----GFPILYGDASRPAVLL 599 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~~----~~~~----~~~~v~GD~t~~~~L~ 599 (791)
..+++.|+|.|.+|..++..|. ..|. +++++|.++++.+. +.+. ...-+.+. +|. +
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la----------~~g~~~ev~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~t-~d~---~ 85 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVL----------MKDLADEVALVDVMEDKLKGEMMDLEHGSLFLHTAKIVSG-KDY---S 85 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHH----------HHCCCSEEEEECSCHHHHHHHHHHHHHHGGGSCCSEEEEE-SSS---C
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------hCCCCCeEEEEECCHHHHHHHHHHhhhhhhcccCCeEEEc-CCH---H
Confidence 3568999999999999999987 5665 89999999987543 2221 11222221 221 2
Q ss_pred hcCCCCCcEEEEEeCC---------H--HHHHHH----HHHHHHhCCCCcEEEEecChhhHHH--H-HHCCC--CeEEcC
Q 003861 600 SAGITSPKAVMIMYTD---------K--KRTIEA----VQRLRLAFPAIPIYARAQDMMHLLD--L-KKAGA--TDAILE 659 (791)
Q Consensus 600 ~agi~~a~~viv~~~~---------d--~~n~~~----~~~ar~l~p~~~iiara~~~~~~~~--L-~~~Ga--d~Vi~p 659 (791)
.+++||.+|++.+. | ..|..+ +..+++..|+..++. +.|+.+.-- + +..|- ++|+--
T Consensus 86 --~~~daDiVIitaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilv-vtNPvdi~t~~~~k~sg~p~~rViG~ 162 (330)
T 3ldh_A 86 --VSAGSKLVVITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKEL-HPELGTDKNKQDWKLSGLPMHRIIGS 162 (330)
T ss_dssp --SCSSCSEEEECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEE-CSSSHHHHHHHHHHHHCCCGGGEECC
T ss_pred --HhCCCCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEe-CCCccHHHHHHHHHHhCCCHHHeecc
Confidence 37899998887532 3 466554 456667788865554 445544322 2 33353 455554
Q ss_pred -cHHHHHHHHHHHHhhcCCChHHHH
Q 003861 660 -NAETSLQLGSKLLKGFGVMSDDVT 683 (791)
Q Consensus 660 -~~~~~~~la~~~l~~l~~~~~~~~ 683 (791)
..+-..|+-..+-+.+|+++..++
T Consensus 163 gt~LDs~R~~~~lA~~lgv~~~~V~ 187 (330)
T 3ldh_A 163 GCNLDSARFRYLMGERLGVHSCLVI 187 (330)
T ss_dssp TTHHHHHHHHHHHHHHHTSCTTTCC
T ss_pred cCchhHHHHHHHHHHHhCCCHHHeE
Confidence 333345666666667777775543
No 225
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=92.33 E-value=0.3 Score=52.58 Aligned_cols=110 Identities=15% Similarity=0.132 Sum_probs=71.8
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCC-CCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNT-VGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~-~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
-++.|+|+|.+|+..++.|.+ . .+.+++ +.|.|+++.+.+.+ .+. ..+. +-++.+++ .++|+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~---------~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~~--~~~~ll~~---~~~D~ 78 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEK---------HADRAELIDVCDIDPAALKAAVERTGA-RGHA--SLTDMLAQ---TDADI 78 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHH---------TTTTEEEEEEECSSHHHHHHHHHHHCC-EEES--CHHHHHHH---CCCSE
T ss_pred ceEEEEcCcHHHHHHHHHHHh---------CCCCeEEEEEEcCCHHHHHHHHHHcCC-ceeC--CHHHHhcC---CCCCE
Confidence 479999999999999999972 3 477766 77999999887654 465 2332 22445554 57899
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEcC
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAILE 659 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~p 659 (791)
|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+..
T Consensus 79 V~i~tp~~~h-~~~~~~al~~g--k~v~~EKP~a~~~~~~~~l~~~a~~~g~~~~v~~ 133 (354)
T 3q2i_A 79 VILTTPSGLH-PTQSIECSEAG--FHVMTEKPMATRWEDGLEMVKAADKAKKHLFVVK 133 (354)
T ss_dssp EEECSCGGGH-HHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred EEECCCcHHH-HHHHHHHHHCC--CCEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEEE
Confidence 9999987643 44444454443 467763 3454444443 55577665443
No 226
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=92.31 E-value=0.45 Score=50.96 Aligned_cols=109 Identities=13% Similarity=0.091 Sum_probs=71.3
Q ss_pred CEEEeCCChhHHH-HHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHH-hcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 533 PVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESR-KLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 533 ~viI~G~G~~G~~-la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~-~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
++-|+|+|.+|+. .+..+.+ ..+.+++ +.|.|+++.+++. +.+.+-.+.|. ++.|++ ++.|+|
T Consensus 25 rigiIG~G~ig~~~~~~~~~~---------~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~--~ell~~---~~iDaV 90 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQD---------AENCVVTAIASRDLTRAREMADRFSVPHAFGSY--EEMLAS---DVIDAV 90 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHH---------CSSEEEEEEECSSHHHHHHHHHHHTCSEEESSH--HHHHHC---SSCSEE
T ss_pred EEEEEcChHHHHHHHHHHHHh---------CCCeEEEEEECCCHHHHHHHHHHcCCCeeeCCH--HHHhcC---CCCCEE
Confidence 6999999999985 5677762 4577776 5699999988765 46776666543 344543 578999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEc
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAIL 658 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~ 658 (791)
+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|.-..+.
T Consensus 91 ~I~tP~~~H-~~~~~~al~aG--khVl~EKPla~~~~ea~~l~~~a~~~~~~l~v~ 143 (350)
T 4had_A 91 YIPLPTSQH-IEWSIKAADAG--KHVVCEKPLALKAGDIDAVIAARDRNKVVVTEA 143 (350)
T ss_dssp EECSCGGGH-HHHHHHHHHTT--CEEEECSCCCSSGGGGHHHHHHHHHHTCCEEEC
T ss_pred EEeCCCchh-HHHHHHHHhcC--CEEEEeCCcccchhhHHHHHHHHHHcCCceeEe
Confidence 999998643 44455555554 467773 3444444443 4556655443
No 227
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=92.31 E-value=0.52 Score=50.01 Aligned_cols=107 Identities=10% Similarity=0.069 Sum_probs=67.7
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
++.|+|+|.+|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+....+.|. ++.+ + .++|+|+
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~---------~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~~--~~~l-~---~~~D~V~ 67 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHT---------SGEYQLVAIYSRKLETAATFASRYQNIQLFDQL--EVFF-K---SSFDLVY 67 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHH---------TTSEEEEEEECSSHHHHHHHGGGSSSCEEESCH--HHHH-T---SSCSEEE
T ss_pred EEEEEeCCHHHHHHHHHHHh---------CCCeEEEEEEeCCHHHHHHHHHHcCCCeEeCCH--HHHh-C---CCCCEEE
Confidence 58899999999999999972 3456654 78999999887654 3543444331 2333 2 5789999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEE
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAI 657 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi 657 (791)
++++++. ....+..+-+.+ .+|++. +.+.+..+.+ ++.|....+
T Consensus 68 i~tp~~~-h~~~~~~al~~g--k~V~~EKP~~~~~~~~~~l~~~a~~~g~~~~~ 118 (325)
T 2ho3_A 68 IASPNSL-HFAQAKAALSAG--KHVILEKPAVSQPQEWFDLIQTAEKNNCFIFE 118 (325)
T ss_dssp ECSCGGG-HHHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EeCChHH-HHHHHHHHHHcC--CcEEEecCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 9998754 334444444443 466664 2344444443 456766544
No 228
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=92.28 E-value=0.17 Score=52.01 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=54.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-----CCCEEEccCCCHHHHHhcC---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-----GFPILYGDASRPAVLLSAG--- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-----~~~~v~GD~t~~~~L~~ag--- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+...+. ...++.+|.+|++.++++=
T Consensus 17 k~vlITGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 86 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFV----------RYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTT 86 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHH
Confidence 45777775 789999999998 8899999999998876554321 4678899999999877641
Q ss_pred ---CCCCcEEEEEe
Q 003861 603 ---ITSPKAVMIMY 613 (791)
Q Consensus 603 ---i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 87 ~~~~~~id~li~~A 100 (278)
T 2bgk_A 87 IAKHGKLDIMFGNV 100 (278)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 13678777544
No 229
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=92.27 E-value=0.17 Score=51.27 Aligned_cols=73 Identities=12% Similarity=0.027 Sum_probs=55.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-----cCCCEEEccCCCHHHHHhcC---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----LGFPILYGDASRPAVLLSAG--- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-----~~~~~v~GD~t~~~~L~~ag--- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++..+ ....++.+|.+|++.++++=
T Consensus 7 k~vlVtGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 76 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFV----------EEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDAT 76 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHH
Confidence 45777776 789999999998 789999999999987665433 34678899999998776531
Q ss_pred ---CCCCcEEEEEeC
Q 003861 603 ---ITSPKAVMIMYT 614 (791)
Q Consensus 603 ---i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 77 ~~~~~~id~li~~Ag 91 (251)
T 1zk4_A 77 EKAFGPVSTLVNNAG 91 (251)
T ss_dssp HHHHSSCCEEEECCC
T ss_pred HHHhCCCCEEEECCC
Confidence 135787776543
No 230
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=92.26 E-value=0.26 Score=49.36 Aligned_cols=72 Identities=17% Similarity=0.104 Sum_probs=56.4
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhc--CCC-C
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA--GIT-S 605 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~a--gi~-~ 605 (791)
.++|.|. |.+|+.+++.|. ++|++|++++.+++..+++.+ .....+.+|.+|++.++++ .+. .
T Consensus 3 ~vlVTGas~gIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 72 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYD----------AEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSI 72 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHH----------HTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSC
T ss_pred EEEEecCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhc
Confidence 5777776 679999999998 889999999999999887765 3578899999999987764 332 2
Q ss_pred CcEEEEEeC
Q 003861 606 PKAVMIMYT 614 (791)
Q Consensus 606 a~~viv~~~ 614 (791)
.|.+|-..+
T Consensus 73 ~d~lv~~Ag 81 (230)
T 3guy_A 73 PSTVVHSAG 81 (230)
T ss_dssp CSEEEECCC
T ss_pred CCEEEEeCC
Confidence 377765543
No 231
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=92.25 E-value=0.084 Score=56.28 Aligned_cols=67 Identities=21% Similarity=0.334 Sum_probs=49.6
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++.|+|+|++|+.+++.|+ ..|.+|++.|.+++.. .+.+.|... . +-++.++ ++|.|+
T Consensus 142 g~~vgIIG~G~IG~~~A~~l~----------~~G~~V~~~d~~~~~~-~~~~~g~~~--~--~l~ell~-----~aDvVv 201 (313)
T 2ekl_A 142 GKTIGIVGFGRIGTKVGIIAN----------AMGMKVLAYDILDIRE-KAEKINAKA--V--SLEELLK-----NSDVIS 201 (313)
T ss_dssp TCEEEEESCSHHHHHHHHHHH----------HTTCEEEEECSSCCHH-HHHHTTCEE--C--CHHHHHH-----HCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------HCCCEEEEECCCcchh-HHHhcCcee--c--CHHHHHh-----hCCEEE
Confidence 346999999999999999998 8899999999998764 345556542 1 2234443 678888
Q ss_pred EEeCCHH
Q 003861 611 IMYTDKK 617 (791)
Q Consensus 611 v~~~~d~ 617 (791)
++.+...
T Consensus 202 l~~P~~~ 208 (313)
T 2ekl_A 202 LHVTVSK 208 (313)
T ss_dssp ECCCCCT
T ss_pred EeccCCh
Confidence 8877543
No 232
>2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A*
Probab=92.23 E-value=0.12 Score=55.25 Aligned_cols=71 Identities=20% Similarity=0.236 Sum_probs=55.6
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCC-----CcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhc--CCC
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG-----WPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSA--GIT 604 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g-----~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~a--gi~ 604 (791)
+++|.|. |-+|+.+++.|. +.| ++|++++.+++... ....+..++.+|.+|++.++++ +.+
T Consensus 3 ~vlVtGatG~iG~~l~~~L~----------~~g~~~~~~~V~~~~r~~~~~~-~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 71 (364)
T 2v6g_A 3 VALIVGVTGIIGNSLAEILP----------LADTPGGPWKVYGVARRTRPAW-HEDNPINYVQCDISDPDDSQAKLSPLT 71 (364)
T ss_dssp EEEEETTTSHHHHHHHHHTT----------STTCTTCSEEEEEEESSCCCSC-CCSSCCEEEECCTTSHHHHHHHHTTCT
T ss_pred EEEEECCCcHHHHHHHHHHH----------hCCCCCCceEEEEEeCCCCccc-cccCceEEEEeecCCHHHHHHHHhcCC
Confidence 5788885 999999999998 788 89999998876533 2234678999999999988765 443
Q ss_pred CCcEEEEEeC
Q 003861 605 SPKAVMIMYT 614 (791)
Q Consensus 605 ~a~~viv~~~ 614 (791)
++|+||-+..
T Consensus 72 ~~d~vih~a~ 81 (364)
T 2v6g_A 72 DVTHVFYVTW 81 (364)
T ss_dssp TCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 4898877643
No 233
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=92.20 E-value=0.34 Score=51.10 Aligned_cols=94 Identities=19% Similarity=0.180 Sum_probs=63.3
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-------CCCEEEccCCCHHHHHhcC
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-------GFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-------~~~~v~GD~t~~~~L~~ag 602 (791)
..++|+.+|+|..+..... +.+ ..|..|+.||.|++.++.+++. .+.++.||+.+. .
T Consensus 122 ~g~rVLDIGcG~G~~ta~~-lA~---------~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l---~--- 185 (298)
T 3fpf_A 122 RGERAVFIGGGPLPLTGIL-LSH---------VYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVI---D--- 185 (298)
T ss_dssp TTCEEEEECCCSSCHHHHH-HHH---------TTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGG---G---
T ss_pred CcCEEEEECCCccHHHHHH-HHH---------ccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhC---C---
Confidence 4568999999975433211 220 3578999999999998887742 357889999763 2
Q ss_pred CCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEe
Q 003861 603 ITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARA 639 (791)
Q Consensus 603 i~~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara 639 (791)
-+.+|+|++...-++..-......|.+.|+-.++++.
T Consensus 186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEc
Confidence 2678988775443222233455666778887777764
No 234
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=92.19 E-value=0.51 Score=53.33 Aligned_cols=93 Identities=14% Similarity=0.254 Sum_probs=61.1
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-----------cCCC----------EEEc
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----------LGFP----------ILYG 590 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-----------~~~~----------~v~G 590 (791)
++|.|+|.|.+|..+|..|. +.|++|++.|.|++.++++.+ .|.. -+..
T Consensus 6 ~kVgVIGaG~MG~~IA~~la----------~aG~~V~l~D~~~e~l~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~ 75 (483)
T 3mog_A 6 QTVAVIGSGTMGAGIAEVAA----------SHGHQVLLYDISAEALTRAIDGIHARLNSRVTRGKLTAETCERTLKRLIP 75 (483)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HTTCCEEEECSCHHHHHHHHHHHHHHHHTTTTTTSSCHHHHHHHHHTEEE
T ss_pred CEEEEECcCHHHHHHHHHHH----------HCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhceeE
Confidence 47999999999999999998 789999999999999887653 2210 0111
Q ss_pred cCCCHHHHHhcCCCCCcEEEEEeCCHHHHH-HHHHHHHHhCCCCcEEEEec
Q 003861 591 DASRPAVLLSAGITSPKAVMIMYTDKKRTI-EAVQRLRLAFPAIPIYARAQ 640 (791)
Q Consensus 591 D~t~~~~L~~agi~~a~~viv~~~~d~~n~-~~~~~ar~l~p~~~iiara~ 640 (791)
.+|. + .+++||.||.+..++.+-. .+...+.+..+.-.|++...
T Consensus 76 -~~~~---~--~~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~Ilasnt 120 (483)
T 3mog_A 76 -VTDI---H--ALAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNT 120 (483)
T ss_dssp -ECCG---G--GGGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECC
T ss_pred -eCCH---H--HhcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecC
Confidence 1222 2 3678999999998864322 22233444333335665433
No 235
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=92.19 E-value=0.17 Score=52.11 Aligned_cols=73 Identities=26% Similarity=0.272 Sum_probs=56.8
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhh-HHHHHhcCCCEEEccCCCHHHHHhc------CC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV-VKESRKLGFPILYGDASRPAVLLSA------GI 603 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~-v~~~~~~~~~~v~GD~t~~~~L~~a------gi 603 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++. .+.+++.+...+.+|.+|++.++++ ..
T Consensus 28 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLL----------EHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQT 97 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHH----------HTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHC
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhc
Confidence 46777776 679999999998 889999999999876 4445667789999999999877653 12
Q ss_pred CCCcEEEEEeC
Q 003861 604 TSPKAVMIMYT 614 (791)
Q Consensus 604 ~~a~~viv~~~ 614 (791)
.+.|.+|-..+
T Consensus 98 g~iD~lv~nAg 108 (260)
T 3gem_A 98 SSLRAVVHNAS 108 (260)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46787776543
No 236
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=92.17 E-value=0.54 Score=43.11 Aligned_cols=97 Identities=8% Similarity=-0.052 Sum_probs=62.8
Q ss_pred CCcEEEEcCChhhHHHHH----hcCC-CEEEccCCCHHHHHhcCCCCCcEEEEEeCC-HHHHHHHHHHHHHhCCCCcEEE
Q 003861 564 GWPFVAFDLNPSVVKESR----KLGF-PILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIYA 637 (791)
Q Consensus 564 g~~vvvID~d~~~v~~~~----~~~~-~~v~GD~t~~~~L~~agi~~a~~viv~~~~-d~~n~~~~~~ar~l~p~~~iia 637 (791)
..+|+++|.|+...+.++ +.+. ..+..-.+-.+.++.+.-.+.|.+++-..- +..-...+..+|+.+|+++|++
T Consensus 20 m~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 99 (150)
T 4e7p_A 20 HMKVLVAEDQSMLRDAMCQLLTLQPDVESVLQAKNGQEAIQLLEKESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVV 99 (150)
T ss_dssp CEEEEEECSCHHHHHHHHHHHHTSTTEEEEEEESSHHHHHHHHTTSCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEE
T ss_pred ccEEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHhhccCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEE
Confidence 345777777776654443 2221 222222233456666666778888776653 3456778889999999999877
Q ss_pred EecCh--hhHHHHHHCCCCeEEcCc
Q 003861 638 RAQDM--MHLLDLKKAGATDAILEN 660 (791)
Q Consensus 638 ra~~~--~~~~~L~~~Gad~Vi~p~ 660 (791)
-..+. +......+.|++.++.-.
T Consensus 100 ls~~~~~~~~~~~~~~g~~~~l~Kp 124 (150)
T 4e7p_A 100 VTTFKRAGYFERAVKAGVDAYVLKE 124 (150)
T ss_dssp EESCCCHHHHHHHHHTTCSEEEETT
T ss_pred EeCCCCHHHHHHHHHCCCcEEEecC
Confidence 76654 466778899999877654
No 237
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=92.15 E-value=0.38 Score=42.96 Aligned_cols=96 Identities=16% Similarity=0.063 Sum_probs=63.9
Q ss_pred CcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC-HHHHHHHHHHHHHhCCCCcEEEEe
Q 003861 565 WPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIYARA 639 (791)
Q Consensus 565 ~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~-d~~n~~~~~~ar~l~p~~~iiara 639 (791)
.++.++|.|+...+.+ ++.|+.++.--.+-.+.++.+.-.+.|.+++-..- +......+..+|+.+|++++++-.
T Consensus 2 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~ii~~s 81 (134)
T 3f6c_A 2 LNAIIIDDHPLAIAAIRNLLIKNDIEILAELTEGGSAVQRVETLKPDIVIIDVDIPGVNGIQVLETLRKRQYSGIIIIVS 81 (134)
T ss_dssp EEEEEECCCHHHHHHHHHHHHHTTEEEEEEESSSTTHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCCSEEEEEE
T ss_pred eEEEEEcCCHHHHHHHHHHHhhCCcEEEEEcCCHHHHHHHHHhcCCCEEEEecCCCCCChHHHHHHHHhcCCCCeEEEEe
Confidence 3578899988765444 34666665222223344554444678988877653 345677889999999998877766
Q ss_pred cCh--hhHHHHHHCCCCeEEcCc
Q 003861 640 QDM--MHLLDLKKAGATDAILEN 660 (791)
Q Consensus 640 ~~~--~~~~~L~~~Gad~Vi~p~ 660 (791)
.+. +......+.|++..+.-.
T Consensus 82 ~~~~~~~~~~~~~~g~~~~l~kp 104 (134)
T 3f6c_A 82 AKNDHFYGKHCADAGANGFVSKK 104 (134)
T ss_dssp CC---CTHHHHHHTTCSEEEEGG
T ss_pred CCCChHHHHHHHHhCCCEEEeCC
Confidence 544 467778899999876643
No 238
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=92.15 E-value=0.78 Score=49.03 Aligned_cols=134 Identities=18% Similarity=0.238 Sum_probs=81.0
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHH----Hhc------CCCEEEccCCCHHHHH
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKES----RKL------GFPILYGDASRPAVLL 599 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~----~~~------~~~~v~GD~t~~~~L~ 599 (791)
+.++.|+|.|.+|..++..|. ..|+ +|+++|.|+++++.. .+. ...+ .+. +|.+
T Consensus 14 ~~kI~ViGaG~vG~~iA~~la----------~~g~~~V~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i-~~t-~d~~--- 78 (328)
T 2hjr_A 14 RKKISIIGAGQIGSTIALLLG----------QKDLGDVYMFDIIEGVPQGKALDLNHCMALIGSPAKI-FGE-NNYE--- 78 (328)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCCEEEEECSSTTHHHHHHHHHHHHHHHHTCCCCE-EEE-SCGG---
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCeEEEEECCHHHHHHHHHHHHhHhhccCCCCEE-EEC-CCHH---
Confidence 457999999999999999998 6787 899999999887642 111 1122 211 2222
Q ss_pred hcCCCCCcEEEEEeCC---------H--HHHHHH----HHHHHHhCCCCcEEEEecChhhH--HHHHHC---CCCeEEcC
Q 003861 600 SAGITSPKAVMIMYTD---------K--KRTIEA----VQRLRLAFPAIPIYARAQDMMHL--LDLKKA---GATDAILE 659 (791)
Q Consensus 600 ~agi~~a~~viv~~~~---------d--~~n~~~----~~~ar~l~p~~~iiara~~~~~~--~~L~~~---Gad~Vi~p 659 (791)
.+++||.||.+.+- | .+|..+ +..+.+..|+..++. +.|+.+. ..+.+. -.++|+--
T Consensus 79 --al~~aD~VI~avg~p~k~g~tr~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~tNP~~~~t~~~~~~~~~~~~rviG~ 155 (328)
T 2hjr_A 79 --YLQNSDVVIITAGVPRKPNMTRSDLLTVNAKIVGSVAENVGKYCPNAFVIC-ITNPLDAMVYYFKEKSGIPANKVCGM 155 (328)
T ss_dssp --GGTTCSEEEECCSCCCCTTCCSGGGHHHHHHHHHHHHHHHHHHCTTCEEEE-CCSSHHHHHHHHHHHHCCCGGGEEES
T ss_pred --HHCCCCEEEEcCCCCCCCCCchhhHHhhhHHHHHHHHHHHHHHCCCeEEEE-ecCchHHHHHHHHHhcCCChhhEEEe
Confidence 36789999988722 1 235443 455566678866554 4555442 333332 24556655
Q ss_pred -cHHHHHHHHHHHHhhcCCChHHH
Q 003861 660 -NAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 660 -~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
...-..|+-..+-+.+|+++..+
T Consensus 156 ~t~Ld~~R~~~~la~~lgv~~~~v 179 (328)
T 2hjr_A 156 SGVLDSARFRCNLSRALGVKPSDV 179 (328)
T ss_dssp CHHHHHHHHHHHHHHHHTSCGGGE
T ss_pred CcHHHHHHHHHHHHHHhCCCHHHe
Confidence 34444455555556667766443
No 239
>2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris}
Probab=92.14 E-value=0.1 Score=54.51 Aligned_cols=71 Identities=17% Similarity=0.124 Sum_probs=55.0
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCC--CCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCC-CCCc
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGI-TSPK 607 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~--g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi-~~a~ 607 (791)
++++|.|. |.+|+.+++.|. +. |++|++++.+++..+ . ..+..++.+|.+|++.++++=- .++|
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~----------~~~~g~~V~~~~r~~~~~~-~-~~~~~~~~~D~~d~~~~~~~~~~~~~d 70 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLR----------KLYGTENVIASDIRKLNTD-V-VNSGPFEVVNALDFNQIEHLVEVHKIT 70 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHH----------HHHCGGGEEEEESCCCSCH-H-HHSSCEEECCTTCHHHHHHHHHHTTCC
T ss_pred ceEEEECCccHHHHHHHHHHH----------HhCCCCEEEEEcCCCcccc-c-cCCCceEEecCCCHHHHHHHHhhcCCC
Confidence 46899988 999999999998 66 899999998776532 2 2367899999999988876511 1688
Q ss_pred EEEEEeC
Q 003861 608 AVMIMYT 614 (791)
Q Consensus 608 ~viv~~~ 614 (791)
+||-+..
T Consensus 71 ~vih~a~ 77 (312)
T 2yy7_A 71 DIYLMAA 77 (312)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 8877654
No 240
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=92.14 E-value=0.16 Score=57.08 Aligned_cols=66 Identities=14% Similarity=0.287 Sum_probs=50.6
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.++|+|+|.+|+.+++.|. ..|.+|++.|.|+++.+.+...+..+ ++.+ .-...+|.++
T Consensus 265 GKtVvVtGaGgIG~aiA~~La----------a~GA~Viv~D~~~~~a~~Aa~~g~dv-----~~le----e~~~~aDvVi 325 (488)
T 3ond_A 265 GKVAVVAGYGDVGKGCAAALK----------QAGARVIVTEIDPICALQATMEGLQV-----LTLE----DVVSEADIFV 325 (488)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEE-----CCGG----GTTTTCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHhCCcc-----CCHH----HHHHhcCEEE
Confidence 357899999999999999998 89999999999999888877776532 2222 1234688777
Q ss_pred EEeCC
Q 003861 611 IMYTD 615 (791)
Q Consensus 611 v~~~~ 615 (791)
.++++
T Consensus 326 ~atG~ 330 (488)
T 3ond_A 326 TTTGN 330 (488)
T ss_dssp ECSSC
T ss_pred eCCCC
Confidence 66654
No 241
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=92.13 E-value=0.18 Score=51.63 Aligned_cols=72 Identities=17% Similarity=0.123 Sum_probs=54.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c----CCCEEEccCCCHHHHHhcC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L----GFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~----~~~~v~GD~t~~~~L~~ag 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++..+ . ...++.+|.+|++.++++=
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 77 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELA----------RNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLF 77 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHH
Confidence 45777776 789999999998 789999999999987655432 1 4667889999998776541
Q ss_pred ------CCCCcEEEEEeC
Q 003861 603 ------ITSPKAVMIMYT 614 (791)
Q Consensus 603 ------i~~a~~viv~~~ 614 (791)
.. .|.+|-..+
T Consensus 78 ~~~~~~~g-id~lv~~Ag 94 (260)
T 2z1n_A 78 EKARDLGG-ADILVYSTG 94 (260)
T ss_dssp HHHHHTTC-CSEEEECCC
T ss_pred HHHHHhcC-CCEEEECCC
Confidence 12 787776554
No 242
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=92.11 E-value=1.3 Score=40.02 Aligned_cols=109 Identities=10% Similarity=0.051 Sum_probs=71.9
Q ss_pred CCCcEEEEcCChhhHHHH----HhcCCCEEEcc-CCCHHHHHhcCCCCCcEEEEEeCCH-HHHHHHHHHHHH--hCCCCc
Q 003861 563 VGWPFVAFDLNPSVVKES----RKLGFPILYGD-ASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRL--AFPAIP 634 (791)
Q Consensus 563 ~g~~vvvID~d~~~v~~~----~~~~~~~v~GD-~t~~~~L~~agi~~a~~viv~~~~d-~~n~~~~~~ar~--l~p~~~ 634 (791)
....+.++|.|+...+.+ ++.|+.....- .+-.+.++.+.-.+.|.+++-..-. ......+..+|+ .+|+++
T Consensus 4 ~~~~ILivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (144)
T 3kht_A 4 RSKRVLVVEDNPDDIALIRRVLDRKDIHCQLEFVDNGAKALYQVQQAKYDLIILDIGLPIANGFEVMSAVRKPGANQHTP 83 (144)
T ss_dssp -CEEEEEECCCHHHHHHHHHHHHHTTCCEEEEEESSHHHHHHHHTTCCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCC
T ss_pred CCCEEEEEeCCHHHHHHHHHHHHhcCCCeeEEEECCHHHHHHHhhcCCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCC
Confidence 356789999998865443 45666632222 3345677777778899888776543 456777888888 678888
Q ss_pred EEEEec--ChhhHHHHHHCCCCeEEcCcHHHHHHHHHHH
Q 003861 635 IYARAQ--DMMHLLDLKKAGATDAILENAETSLQLGSKL 671 (791)
Q Consensus 635 iiara~--~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~ 671 (791)
+++-.. +.+......++||+.++.-......++...+
T Consensus 84 ii~~s~~~~~~~~~~~~~~ga~~~l~Kp~~~~~~l~~~i 122 (144)
T 3kht_A 84 IVILTDNVSDDRAKQCMAAGASSVVDKSSNNVTDFYGRI 122 (144)
T ss_dssp EEEEETTCCHHHHHHHHHTTCSEEEECCTTSHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHcCCCEEEECCCCcHHHHHHHH
Confidence 887765 4566667889999998765541234444333
No 243
>2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=92.07 E-value=0.068 Score=52.65 Aligned_cols=67 Identities=12% Similarity=0.073 Sum_probs=54.7
Q ss_pred CCCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCc
Q 003861 531 SEPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 531 ~~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
..+++|.| .|.+|+.+++.|. +.|+ +|++++.+++. ...+..++.+|.+|++.++++- +|
T Consensus 5 ~~~vlVtGatG~iG~~l~~~l~----------~~g~~~~V~~~~r~~~~----~~~~~~~~~~D~~~~~~~~~~~---~d 67 (215)
T 2a35_A 5 PKRVLLAGATGLTGEHLLDRIL----------SEPTLAKVIAPARKALA----EHPRLDNPVGPLAELLPQLDGS---ID 67 (215)
T ss_dssp CCEEEEECTTSHHHHHHHHHHH----------HCTTCCEEECCBSSCCC----CCTTEECCBSCHHHHGGGCCSC---CS
T ss_pred CceEEEECCCcHHHHHHHHHHH----------hCCCCCeEEEEeCCCcc----cCCCceEEeccccCHHHHHHhh---hc
Confidence 34789998 6999999999998 7787 99999998875 2345677889999999888765 89
Q ss_pred EEEEEeC
Q 003861 608 AVMIMYT 614 (791)
Q Consensus 608 ~viv~~~ 614 (791)
.+|-+.+
T Consensus 68 ~vi~~a~ 74 (215)
T 2a35_A 68 TAFCCLG 74 (215)
T ss_dssp EEEECCC
T ss_pred EEEECee
Confidence 8887765
No 244
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=92.02 E-value=0.2 Score=51.81 Aligned_cols=73 Identities=21% Similarity=0.219 Sum_probs=55.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+++.+ . ...++.+|.+|++.++++
T Consensus 32 k~vlITGasggIG~~la~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 101 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFA----------KLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKK 101 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHH
Confidence 45777765 789999999998 789999999999987665432 2 466788999999877653
Q ss_pred ---CCCCCcEEEEEeC
Q 003861 602 ---GITSPKAVMIMYT 614 (791)
Q Consensus 602 ---gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 102 ~~~~~g~iD~li~~Ag 117 (272)
T 1yb1_A 102 VKAEIGDVSILVNNAG 117 (272)
T ss_dssp HHHHTCCCSEEEECCC
T ss_pred HHHHCCCCcEEEECCC
Confidence 1246788776653
No 245
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=92.01 E-value=0.24 Score=50.65 Aligned_cols=74 Identities=9% Similarity=0.040 Sum_probs=54.4
Q ss_pred CCCCEEEeCC---ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhh---HHHHHh--cCCCEEEccCCCHHHHHhc
Q 003861 530 GSEPVVIVGF---GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV---VKESRK--LGFPILYGDASRPAVLLSA 601 (791)
Q Consensus 530 ~~~~viI~G~---G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~---v~~~~~--~~~~~v~GD~t~~~~L~~a 601 (791)
..++++|.|. |.+|+.+++.|. ++|++|++++.+++. .+++.+ ....++.+|.+|++.++++
T Consensus 13 ~~k~vlITGa~~~~giG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 82 (271)
T 3ek2_A 13 DGKRILLTGLLSNRSIAYGIAKACK----------REGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDAL 82 (271)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHH
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHH----------HcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHH
Confidence 4567888886 489999999998 889999999887544 333322 2478899999999877653
Q ss_pred ------CCCCCcEEEEEe
Q 003861 602 ------GITSPKAVMIMY 613 (791)
Q Consensus 602 ------gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 83 ~~~~~~~~g~id~lv~nA 100 (271)
T 3ek2_A 83 FASLKTHWDSLDGLVHSI 100 (271)
T ss_dssp HHHHHHHCSCEEEEEECC
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 123678777554
No 246
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=92.00 E-value=0.1 Score=55.53 Aligned_cols=72 Identities=10% Similarity=0.144 Sum_probs=54.6
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCC--CCcEEEEcCChh-----hHHHHHhcCCCEEEccCCCHHHHHhcCC
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPS-----VVKESRKLGFPILYGDASRPAVLLSAGI 603 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~--g~~vvvID~d~~-----~v~~~~~~~~~~v~GD~t~~~~L~~agi 603 (791)
++++|.| .|-+|+.+++.|. +. |++|+++|.+++ ..+.+...+..++.+|.+|++.++++ +
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~----------~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~-~ 73 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVY----------NNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAELVDKL-A 73 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHH----------HHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHHHHHHH-H
T ss_pred cEEEEeCCccHHHHHHHHHHH----------HhCCCCEEEEEeCCCCCCChhHHhhhccCCeEEEECCCCCHHHHHHH-h
Confidence 3688888 5999999999998 56 899999998642 22222234678899999999988876 4
Q ss_pred CCCcEEEEEeC
Q 003861 604 TSPKAVMIMYT 614 (791)
Q Consensus 604 ~~a~~viv~~~ 614 (791)
+++|+||-+.+
T Consensus 74 ~~~d~vih~A~ 84 (348)
T 1oc2_A 74 AKADAIVHYAA 84 (348)
T ss_dssp TTCSEEEECCS
T ss_pred hcCCEEEECCc
Confidence 56688877754
No 247
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=91.99 E-value=0.2 Score=50.99 Aligned_cols=72 Identities=14% Similarity=0.129 Sum_probs=56.4
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc--CCCEEEccCCCHHHHHhcC------
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL--GFPILYGDASRPAVLLSAG------ 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~--~~~~v~GD~t~~~~L~~ag------ 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+. ....+.+|.+|++.++++=
T Consensus 3 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 72 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFL----------EAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEK 72 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHH
Confidence 45777776 678999999998 8899999999999988777653 3558899999998776541
Q ss_pred CCCCcEEEEEe
Q 003861 603 ITSPKAVMIMY 613 (791)
Q Consensus 603 i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 73 ~g~id~lv~nA 83 (247)
T 3dii_A 73 LQRIDVLVNNA 83 (247)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 13678777655
No 248
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=91.98 E-value=0.14 Score=55.77 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=47.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCc-EEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWP-FVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~-vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
+++.|+|+|++|+.+++.|. ..|.+ |++.|.+++..+...+.|... .+ +-++.+ +++|.|+
T Consensus 165 ~tvgIIG~G~IG~~vA~~l~----------~~G~~~V~~~d~~~~~~~~~~~~g~~~--~~-~l~ell-----~~aDvV~ 226 (364)
T 2j6i_A 165 KTIATIGAGRIGYRVLERLV----------PFNPKELLYYDYQALPKDAEEKVGARR--VE-NIEELV-----AQADIVT 226 (364)
T ss_dssp CEEEEECCSHHHHHHHHHHG----------GGCCSEEEEECSSCCCHHHHHHTTEEE--CS-SHHHHH-----HTCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHH----------hCCCcEEEEECCCccchhHHHhcCcEe--cC-CHHHHH-----hcCCEEE
Confidence 46999999999999999998 88997 999998876655555555321 11 222333 3677777
Q ss_pred EEeCCH
Q 003861 611 IMYTDK 616 (791)
Q Consensus 611 v~~~~d 616 (791)
++.+..
T Consensus 227 l~~P~t 232 (364)
T 2j6i_A 227 VNAPLH 232 (364)
T ss_dssp ECCCCS
T ss_pred ECCCCC
Confidence 777654
No 249
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=91.97 E-value=0.12 Score=55.64 Aligned_cols=66 Identities=15% Similarity=0.262 Sum_probs=48.1
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+.+.|+|+|++|+.+++.|+ ..|.+|++.|.+++..+...+.|... . +-++.+ +++|.|++
T Consensus 146 ~tvGIIG~G~IG~~vA~~l~----------~~G~~V~~~d~~~~~~~~~~~~g~~~--~--~l~ell-----~~aDvV~l 206 (330)
T 4e5n_A 146 ATVGFLGMGAIGLAMADRLQ----------GWGATLQYHEAKALDTQTEQRLGLRQ--V--ACSELF-----ASSDFILL 206 (330)
T ss_dssp CEEEEECCSHHHHHHHHHTT----------TSCCEEEEECSSCCCHHHHHHHTEEE--C--CHHHHH-----HHCSEEEE
T ss_pred CEEEEEeeCHHHHHHHHHHH----------HCCCEEEEECCCCCcHhHHHhcCcee--C--CHHHHH-----hhCCEEEE
Confidence 46999999999999999998 89999999999885555555555421 1 223344 35787888
Q ss_pred EeCCH
Q 003861 612 MYTDK 616 (791)
Q Consensus 612 ~~~~d 616 (791)
+.+..
T Consensus 207 ~~P~t 211 (330)
T 4e5n_A 207 ALPLN 211 (330)
T ss_dssp CCCCS
T ss_pred cCCCC
Confidence 77753
No 250
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=91.96 E-value=0.17 Score=51.13 Aligned_cols=73 Identities=12% Similarity=0.055 Sum_probs=55.8
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhc------
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~a------ 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ .+...+.+|.+|++.++++
T Consensus 4 k~vlVTGas~GIG~a~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 73 (235)
T 3l6e_A 4 GHIIVTGAGSGLGRALTIGLV----------ERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVE 73 (235)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHH
Confidence 45778886 679999999998 899999999999998776543 2577889999999876643
Q ss_pred CCCCCcEEEEEeC
Q 003861 602 GITSPKAVMIMYT 614 (791)
Q Consensus 602 gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 74 ~~g~id~lvnnAg 86 (235)
T 3l6e_A 74 WGGLPELVLHCAG 86 (235)
T ss_dssp HHCSCSEEEEECC
T ss_pred hcCCCcEEEECCC
Confidence 1135677766543
No 251
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=91.96 E-value=0.19 Score=53.29 Aligned_cols=108 Identities=14% Similarity=0.104 Sum_probs=68.6
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
-++.|+|+|++|+..++.|.+ ..+.+++ +.|.|+++.+.+.+. .. .+. +-++.+++ .++|+|+
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~---------~~~~~~v~v~d~~~~~~~~~~~~-~~-~~~--~~~~~l~~---~~~D~V~ 74 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAG---------LPGAALVRLASSNPDNLALVPPG-CV-IES--DWRSVVSA---PEVEAVI 74 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHH---------CTTEEEEEEEESCHHHHTTCCTT-CE-EES--STHHHHTC---TTCCEEE
T ss_pred ceEEEECCcHHHHHHHHHHHh---------CCCcEEEEEEeCCHHHHHHHHhh-Cc-ccC--CHHHHhhC---CCCCEEE
Confidence 479999999999999999972 3466654 889999988766554 22 232 23445532 4789999
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHH----HHHCCCCeEEc
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLD----LKKAGATDAIL 658 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~----L~~~Gad~Vi~ 658 (791)
++++++. ....+..+-+.+ .+|++. +.+.+..+. .++.|....+.
T Consensus 75 i~tp~~~-h~~~~~~al~~G--k~v~~eKP~~~~~~~~~~l~~~a~~~g~~~~~~ 126 (315)
T 3c1a_A 75 IATPPAT-HAEITLAAIASG--KAVLVEKPLTLDLAEAEAVAAAAKATGVMVWVE 126 (315)
T ss_dssp EESCGGG-HHHHHHHHHHTT--CEEEEESSSCSCHHHHHHHHHHHHHHCCCEEEE
T ss_pred EeCChHH-HHHHHHHHHHCC--CcEEEcCCCcCCHHHHHHHHHHHHHcCCEEEEe
Confidence 9998754 344444444443 466664 334444333 35567776553
No 252
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=91.94 E-value=0.16 Score=52.91 Aligned_cols=71 Identities=13% Similarity=0.155 Sum_probs=54.1
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c---CCCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L---GFPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~---~~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+.+.+ . ...++.+|.+|++.++++=
T Consensus 29 k~vlITGasggIG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~ 98 (286)
T 1xu9_A 29 KKVIVTGASKGIGREMAYHLA----------KMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVA 98 (286)
T ss_dssp CEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHH
Confidence 46888887 789999999998 789999999999987665432 2 3567889999988766531
Q ss_pred -----CCCCcEEEEE
Q 003861 603 -----ITSPKAVMIM 612 (791)
Q Consensus 603 -----i~~a~~viv~ 612 (791)
..+.|.+|-.
T Consensus 99 ~~~~~~g~iD~li~n 113 (286)
T 1xu9_A 99 QAGKLMGGLDMLILN 113 (286)
T ss_dssp HHHHHHTSCSEEEEC
T ss_pred HHHHHcCCCCEEEEC
Confidence 1367877644
No 253
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=91.93 E-value=0.19 Score=50.56 Aligned_cols=72 Identities=14% Similarity=0.034 Sum_probs=55.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCC--CcEEEEcCChhhHHHHHhc---CCCEEEccCCCHHHHHhcCC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSAGI-- 603 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g--~~vvvID~d~~~v~~~~~~---~~~~v~GD~t~~~~L~~agi-- 603 (791)
+.++|.|. |.+|+.+++.|. +.| ++|++++.+++..+.+.+. ...++.+|.+|++.++++--
T Consensus 4 k~vlItGasggiG~~la~~l~----------~~g~~~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 73 (250)
T 1yo6_A 4 GSVVVTGANRGIGLGLVQQLV----------KDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKV 73 (250)
T ss_dssp SEEEESSCSSHHHHHHHHHHH----------TCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHH----------hcCCCcEEEEEecCHHHHHHHHhccCCceEEEEeecCCHHHHHHHHHHH
Confidence 35777775 788999999998 789 9999999999887766543 46788999999987765411
Q ss_pred ------CCCcEEEEEe
Q 003861 604 ------TSPKAVMIMY 613 (791)
Q Consensus 604 ------~~a~~viv~~ 613 (791)
.+.|.+|-+.
T Consensus 74 ~~~~g~~~id~li~~A 89 (250)
T 1yo6_A 74 GEIVGSDGLSLLINNA 89 (250)
T ss_dssp HHHHGGGCCCEEEECC
T ss_pred HHhcCCCCCcEEEECC
Confidence 1678777654
No 254
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=91.92 E-value=0.31 Score=50.83 Aligned_cols=73 Identities=15% Similarity=0.124 Sum_probs=58.0
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc---CCCEEEccCCCHHHHHhc--CCCC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSA--GITS 605 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~---~~~~v~GD~t~~~~L~~a--gi~~ 605 (791)
+.++|.|. |-+|+.+++.|. ++|++|++++.+++..+.+.+. ...++.+|.+|++.++++ .+.+
T Consensus 17 k~vlVTGas~gIG~~~a~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 86 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELA----------RRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSG 86 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCC
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCC
Confidence 35677776 779999999998 8899999999999988777543 467889999999988764 4457
Q ss_pred CcEEEEEeC
Q 003861 606 PKAVMIMYT 614 (791)
Q Consensus 606 a~~viv~~~ 614 (791)
.|.+|-..+
T Consensus 87 iD~lv~nAg 95 (291)
T 3rd5_A 87 ADVLINNAG 95 (291)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCc
Confidence 787776543
No 255
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=91.89 E-value=0.54 Score=50.33 Aligned_cols=107 Identities=16% Similarity=0.219 Sum_probs=68.7
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCC-CEEEccCCCHHHHHhcCCCCCcEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGF-PILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~-~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
++.|+|+|.+|+..++.|.+ ...+.+++ +.|.|+++.+.+.+ .+. ...+.| -++.+++ .++|+|
T Consensus 4 rigiIG~G~~g~~~~~~l~~--------~~~~~~l~av~d~~~~~~~~~~~~~g~~~~~~~~--~~~ll~~---~~~D~V 70 (344)
T 3mz0_A 4 RIGVIGTGAIGKEHINRITN--------KLSGAEIVAVTDVNQEAAQKVVEQYQLNATVYPN--DDSLLAD---ENVDAV 70 (344)
T ss_dssp EEEEECCSHHHHHHHHHHHH--------TCSSEEEEEEECSSHHHHHHHHHHTTCCCEEESS--HHHHHHC---TTCCEE
T ss_pred EEEEECccHHHHHHHHHHHh--------hCCCcEEEEEEcCCHHHHHHHHHHhCCCCeeeCC--HHHHhcC---CCCCEE
Confidence 68999999999999998861 03567766 67999999887754 453 233332 2344443 578999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCe
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATD 655 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~ 655 (791)
+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|...
T Consensus 71 ~i~tp~~~h-~~~~~~al~~G--k~vl~EKP~a~~~~e~~~l~~~a~~~g~~~ 120 (344)
T 3mz0_A 71 LVTSWGPAH-ESSVLKAIKAQ--KYVFCEKPLATTAEGCMRIVEEEIKVGKRL 120 (344)
T ss_dssp EECSCGGGH-HHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHHSSCC
T ss_pred EECCCchhH-HHHHHHHHHCC--CcEEEcCCCCCCHHHHHHHHHHHHHHCCEE
Confidence 999987543 44455555554 467763 3455554444 4456654
No 256
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=91.88 E-value=0.22 Score=52.82 Aligned_cols=74 Identities=16% Similarity=0.066 Sum_probs=55.9
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHH----HHH---hcCCCEEEccCCCHHHHHhcC
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVK----ESR---KLGFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~----~~~---~~~~~~v~GD~t~~~~L~~ag 602 (791)
.++++|.|. |-+|+.+++.|. +.|++|++++.+++..+ .+. ..+..++.+|.+|++.++++=
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 74 (341)
T 3enk_A 5 KGTILVTGGAGYIGSHTAVELL----------AHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIF 74 (341)
T ss_dssp SCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHH
T ss_pred CcEEEEecCCcHHHHHHHHHHH----------HCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHH
Confidence 447889985 999999999998 78999999998765432 222 246888999999999887752
Q ss_pred -CCCCcEEEEEeC
Q 003861 603 -ITSPKAVMIMYT 614 (791)
Q Consensus 603 -i~~a~~viv~~~ 614 (791)
-.++|.+|-+..
T Consensus 75 ~~~~~d~vih~A~ 87 (341)
T 3enk_A 75 DAHPITAAIHFAA 87 (341)
T ss_dssp HHSCCCEEEECCC
T ss_pred hccCCcEEEECcc
Confidence 136787776553
No 257
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=91.87 E-value=0.085 Score=56.05 Aligned_cols=71 Identities=18% Similarity=0.218 Sum_probs=52.7
Q ss_pred CCCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhH------HHHH-hcCCCEEEccCCCHHHHHhcC
Q 003861 531 SEPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV------KESR-KLGFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 531 ~~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v------~~~~-~~~~~~v~GD~t~~~~L~~ag 602 (791)
.++++|.| .|-+|+.+++.|. ++|++|++++.+++.. +.+. ..+..++.||.+|++.++++
T Consensus 9 ~~~vlVTGatGfIG~~l~~~Ll----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~- 77 (338)
T 2rh8_A 9 KKTACVVGGTGFVASLLVKLLL----------QKGYAVNTTVRDPDNQKKVSHLLELQELGDLKIFRADLTDELSFEAP- 77 (338)
T ss_dssp CCEEEEECTTSHHHHHHHHHHH----------HTTCEEEEEESCTTCTTTTHHHHHHGGGSCEEEEECCTTTSSSSHHH-
T ss_pred CCEEEEECCchHHHHHHHHHHH----------HCCCEEEEEEcCcchhhhHHHHHhcCCCCcEEEEecCCCChHHHHHH-
Confidence 45789999 6999999999998 7899999877766532 1222 23567889999998877664
Q ss_pred CCCCcEEEEE
Q 003861 603 ITSPKAVMIM 612 (791)
Q Consensus 603 i~~a~~viv~ 612 (791)
++++|+||-+
T Consensus 78 ~~~~D~Vih~ 87 (338)
T 2rh8_A 78 IAGCDFVFHV 87 (338)
T ss_dssp HTTCSEEEEE
T ss_pred HcCCCEEEEe
Confidence 3467877754
No 258
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=91.86 E-value=0.07 Score=58.55 Aligned_cols=48 Identities=19% Similarity=0.279 Sum_probs=42.1
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPIL 588 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v 588 (791)
..+++|+|.|++|+.+++.++ ..|.+|++.|.++++.+.+++.|..++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~----------~~Ga~V~~~d~~~~~~~~~~~~Ga~~~ 219 (384)
T 1l7d_A 172 PARVLVFGVGVAGLQAIATAK----------RLGAVVMATDVRAATKEQVESLGGKFI 219 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCSTTHHHHHHTTCEEC
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCeEE
Confidence 558999999999999999998 789999999999998888877776544
No 259
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=91.84 E-value=0.18 Score=56.53 Aligned_cols=101 Identities=16% Similarity=0.162 Sum_probs=61.7
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHH--------HHHhcCCC----------EEEccCC
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVK--------ESRKLGFP----------ILYGDAS 593 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~--------~~~~~~~~----------~v~GD~t 593 (791)
++|.|+|.|.+|..+|..|. +.|++|++.|.|+++.. ++.+.|.- -+.. .+
T Consensus 55 ~kVaVIGaG~MG~~IA~~la----------~aG~~V~l~D~~~e~a~~~i~~~l~~~~~~G~l~~~~~~~~~~~i~~-t~ 123 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFG----------LAGIETFLVVRNEQRCKQELEVMYAREKSFKRLNDKRIEKINANLKI-TS 123 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHTTEEE-ES
T ss_pred CEEEEECCCHHHHHHHHHHH----------HCCCeEEEEECcHHHHHHHHHHHHHHHHHcCCCCHHHHHHHhcceEE-eC
Confidence 57999999999999999998 78999999999998432 23233320 0111 11
Q ss_pred CHHHHHhcCCCCCcEEEEEeCCHHHHH-HHHHHHHHhCCCCcEEEEecChhhHHHH
Q 003861 594 RPAVLLSAGITSPKAVMIMYTDKKRTI-EAVQRLRLAFPAIPIYARAQDMMHLLDL 648 (791)
Q Consensus 594 ~~~~L~~agi~~a~~viv~~~~d~~n~-~~~~~ar~l~p~~~iiara~~~~~~~~L 648 (791)
| ++ .+++||.||.++.++..-. .+...+.+.-+.-.|++...+.-....+
T Consensus 124 d---l~--al~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSsl~i~~i 174 (460)
T 3k6j_A 124 D---FH--KLSNCDLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSSLDLNEI 174 (460)
T ss_dssp C---GG--GCTTCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSSSCHHHH
T ss_pred C---HH--HHccCCEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCChhHHHH
Confidence 2 22 3789999999998764322 2222333332222466644443333444
No 260
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=91.83 E-value=0.78 Score=48.56 Aligned_cols=134 Identities=14% Similarity=0.177 Sum_probs=81.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHH----Hhc------CCCEEEccCCCHHHHHh
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKES----RKL------GFPILYGDASRPAVLLS 600 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~----~~~------~~~~v~GD~t~~~~L~~ 600 (791)
.++.|+|.|.+|..++..|. ..|. +++++|.|+++++.. .+. ...+... +|.+
T Consensus 3 ~kI~VIGaG~vG~~~a~~la----------~~g~~~v~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~---- 66 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLA----------AKELGDIVLLDIVEGVPQGKALDLYEASPIEGFDVRVTGT--NNYA---- 66 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCSEEEEECSSSSHHHHHHHHHHTTHHHHTCCCCEEEE--SCGG----
T ss_pred CEEEEECCCHHHHHHHHHHH----------HCCCCeEEEEeCCccHHHHHHHhHHHhHhhcCCCeEEEEC--CCHH----
Confidence 47999999999999999997 5665 899999999776432 110 1222220 2222
Q ss_pred cCCCCCcEEEEEeCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHHH-CC--CCeEEcC-
Q 003861 601 AGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLKK-AG--ATDAILE- 659 (791)
Q Consensus 601 agi~~a~~viv~~~~---------d--~~n~~----~~~~ar~l~p~~~iiara~~~~~~--~~L~~-~G--ad~Vi~p- 659 (791)
.+++||.||++.+. | ..|.. ++..+++..|+..++. +.|+.+. ..+++ .| .++|+--
T Consensus 67 -a~~~aD~Vi~a~g~p~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~vi~-~tNPv~~~t~~~~~~~~~~~~rviG~g 144 (309)
T 1ur5_A 67 -DTANSDVIVVTSGAPRKPGMSREDLIKVNADITRACISQAAPLSPNAVIIM-VNNPLDAMTYLAAEVSGFPKERVIGQA 144 (309)
T ss_dssp -GGTTCSEEEECCCC--------CHHHHHHHHHHHHHHHHHGGGCTTCEEEE-CCSSHHHHHHHHHHHHCCCGGGEEECC
T ss_pred -HHCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEE-cCCchHHHHHHHHHHcCCCHHHEEECC
Confidence 26789999988632 2 34543 3445555677765555 4555443 23333 23 3367666
Q ss_pred cHHHHHHHHHHHHhhcCCChHHHH
Q 003861 660 NAETSLQLGSKLLKGFGVMSDDVT 683 (791)
Q Consensus 660 ~~~~~~~la~~~l~~l~~~~~~~~ 683 (791)
..+-..++-..+-+.+|+++..++
T Consensus 145 t~LD~~r~~~~la~~lgv~~~~v~ 168 (309)
T 1ur5_A 145 GVLDAARYRTFIAMEAGVSVEDVQ 168 (309)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred cchHHHHHHHHHHHHhCCChhhee
Confidence 443355666666667777775443
No 261
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=91.82 E-value=0.54 Score=45.76 Aligned_cols=74 Identities=15% Similarity=0.141 Sum_probs=55.6
Q ss_pred CCCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHH---h-cCCCC
Q 003861 531 SEPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLL---S-AGITS 605 (791)
Q Consensus 531 ~~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~---~-agi~~ 605 (791)
.++++|.| .|.+|+.+++.+. ..|.+|+++|.++++.+.+++.|...+ .|.++++..+ + .+-..
T Consensus 39 g~~vlV~Ga~ggiG~~~~~~~~----------~~G~~V~~~~~~~~~~~~~~~~g~~~~-~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 39 GERVLIHSATGGVGMAAVSIAK----------MIGARIYTTAGSDAKREMLSRLGVEYV-GDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp TCEEEETTTTSHHHHHHHHHHH----------HHTCEEEEEESSHHHHHHHHTTCCSEE-EETTCSTHHHHHHHHTTTCC
T ss_pred CCEEEEeeCCChHHHHHHHHHH----------HcCCEEEEEeCCHHHHHHHHHcCCCEE-eeCCcHHHHHHHHHHhCCCC
Confidence 45799999 6999999999998 789999999999999888887776544 3666544322 2 23246
Q ss_pred CcEEEEEeCC
Q 003861 606 PKAVMIMYTD 615 (791)
Q Consensus 606 a~~viv~~~~ 615 (791)
.|.++-+.+.
T Consensus 108 ~D~vi~~~g~ 117 (198)
T 1pqw_A 108 VDVVLNSLAG 117 (198)
T ss_dssp EEEEEECCCT
T ss_pred CeEEEECCch
Confidence 8988877764
No 262
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=91.81 E-value=0.17 Score=57.18 Aligned_cols=43 Identities=21% Similarity=0.259 Sum_probs=38.2
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCC--CCcEEEEcCChhhHHHHHhcC
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKLG 584 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~--g~~vvvID~d~~~v~~~~~~~ 584 (791)
.++.|+|.|.+|..++..|. +. |++|+++|.|+++++.+.+.+
T Consensus 10 mkI~VIG~G~vG~~~A~~La----------~~g~g~~V~~~D~~~~~v~~l~~g~ 54 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIA----------HKCPHITVTVVDMNTAKIAEWNSDK 54 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------HHCTTSEEEEECSCHHHHHHHTSSS
T ss_pred CEEEEECCCHHHHHHHHHHH----------hcCCCCEEEEEECCHHHHHHHHCCC
Confidence 37999999999999999998 55 799999999999999987643
No 263
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=91.80 E-value=1.1 Score=47.84 Aligned_cols=134 Identities=15% Similarity=0.150 Sum_probs=82.7
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCC--CcEEEEcCChhhHHH-HHh--cC----CC-EEEccCCCHHHHHh
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSVVKE-SRK--LG----FP-ILYGDASRPAVLLS 600 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g--~~vvvID~d~~~v~~-~~~--~~----~~-~v~GD~t~~~~L~~ 600 (791)
+.++.|+|.|.+|..++-.|. ..+ .+++++|.|+++++. +.+ +. .+ -+.+| +.+
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~----------~~~~~~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~i~~~--~~~---- 72 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMV----------LQGIAQEIGIVDIFKDKTKGDAIDLSNALPFTSPKKIYSA--EYS---- 72 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECSCHHHHHHHHHHHHTTGGGSCCCEEEEC--CGG----
T ss_pred CCEEEEECCCHHHHHHHHHHH----------cCCCCCEEEEEeCCchHhHHHHHHHHHHHHhcCCeEEEEC--CHH----
Confidence 457999999999999999886 333 389999999987654 222 11 11 13332 222
Q ss_pred cCCCCCcEEEEEeCCH-----------HHHHH----HHHHHHHhCCCCcEEEEecChhhHH--HHHH-CCC--CeEEcC-
Q 003861 601 AGITSPKAVMIMYTDK-----------KRTIE----AVQRLRLAFPAIPIYARAQDMMHLL--DLKK-AGA--TDAILE- 659 (791)
Q Consensus 601 agi~~a~~viv~~~~d-----------~~n~~----~~~~ar~l~p~~~iiara~~~~~~~--~L~~-~Ga--d~Vi~p- 659 (791)
.+++||.||++.+-. ..|.. ++..+++.+|+..++. ..||.+.- .+++ .|. .+|+--
T Consensus 73 -a~~~aDvVii~ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~tNPv~~~t~~~~k~s~~p~~rviG~g 150 (326)
T 2zqz_A 73 -DAKDADLVVITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLV-AANPVDILTYATWKLSGFPKNRVVGSG 150 (326)
T ss_dssp -GGGGCSEEEECCCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGEEECT
T ss_pred -HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE-eCCcHHHHHHHHHHHcCCCHHHEEEcc
Confidence 267899998887532 13443 3455666789987776 56665542 3333 344 367644
Q ss_pred cHHHHHHHHHHHHhhcCCChHHH
Q 003861 660 NAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 660 ~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
...-..++-..+-+.+|+++..+
T Consensus 151 t~LD~~R~~~~la~~lgv~~~~v 173 (326)
T 2zqz_A 151 TSLDTARFRQSIAEMVNVDARSV 173 (326)
T ss_dssp THHHHHHHHHHHHHHHTCCGGGE
T ss_pred ccchHHHHHHHHHHHhCCChhhe
Confidence 43434566666666677776443
No 264
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=91.80 E-value=0.21 Score=50.82 Aligned_cols=72 Identities=13% Similarity=0.142 Sum_probs=54.1
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHH----Hhc--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKES----RKL--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~----~~~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+.. ++. ...++.+|.+|++.++++=
T Consensus 14 k~vlItGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 83 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALA----------EAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRS 83 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 45777765 789999999998 7899999999998765443 222 3667899999998876541
Q ss_pred ----CCCCcEEEEEe
Q 003861 603 ----ITSPKAVMIMY 613 (791)
Q Consensus 603 ----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 84 ~~~~~~~id~vi~~A 98 (260)
T 3awd_A 84 VHEQEGRVDILVACA 98 (260)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 23678777654
No 265
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=91.77 E-value=0.18 Score=50.97 Aligned_cols=72 Identities=14% Similarity=0.120 Sum_probs=54.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++..+ ....++.+|.+|++.++++=
T Consensus 3 k~vlItGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 72 (250)
T 2cfc_A 3 RVAIVTGASSGNGLAIATRFL----------ARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIA 72 (250)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 35777776 788999999998 789999999999887665432 23567899999998877641
Q ss_pred -----CCCCcEEEEEe
Q 003861 603 -----ITSPKAVMIMY 613 (791)
Q Consensus 603 -----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 73 ~~~~~~~~id~li~~A 88 (250)
T 2cfc_A 73 ATMEQFGAIDVLVNNA 88 (250)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 13678777654
No 266
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=91.76 E-value=0.086 Score=57.05 Aligned_cols=76 Identities=22% Similarity=0.179 Sum_probs=52.6
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCC-CHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDAS-RPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t-~~~~L~~agi~~a~~vi 610 (791)
+.++|+|.|..|..++...+ +.|++++++|.|++... .+.-..++..|.+ |.+.+.+ -.+++|+++
T Consensus 2 K~I~ilGgg~~g~~~~~~Ak----------~~G~~vv~vd~~~~~~~--~~~aD~~~~~~~~~d~~~~~~-~~~~~D~v~ 68 (363)
T 4ffl_A 2 KTICLVGGKLQGFEAAYLSK----------KAGMKVVLVDKNPQALI--RNYADEFYCFDVIKEPEKLLE-LSKRVDAVL 68 (363)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCTTCTT--TTTSSEEEECCTTTCHHHHHH-HHTSSSEEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCCCChh--HhhCCEEEECCCCcCHHHHHH-HhcCCCEEE
Confidence 36899999999999999998 89999999999987532 1122235555654 4444433 235789887
Q ss_pred EEeCCHHHHH
Q 003861 611 IMYTDKKRTI 620 (791)
Q Consensus 611 v~~~~d~~n~ 620 (791)
...++...+.
T Consensus 69 ~~~~~~~~~~ 78 (363)
T 4ffl_A 69 PVNENLACIE 78 (363)
T ss_dssp ECCCCHHHHH
T ss_pred ECCCChhHHH
Confidence 7776654433
No 267
>1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A*
Probab=91.76 E-value=0.58 Score=47.92 Aligned_cols=107 Identities=13% Similarity=0.119 Sum_probs=64.4
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
+++|+|+ |++|+.+++.+.+ ..+.+++ ++|.+ .|.+.+.. .++|++|
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~---------~~~~elva~~d~~-------------------~dl~~~~~---~~~DvvI 50 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAA---------ADDLTLSAELDAG-------------------DPLSLLTD---GNTEVVI 50 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHH---------CTTCEEEEEECTT-------------------CCTHHHHH---TTCCEEE
T ss_pred EEEEECCCCHHHHHHHHHHHh---------CCCCEEEEEEccC-------------------CCHHHHhc---cCCcEEE
Confidence 4899996 9999999999862 4578876 55643 12222222 3678665
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEEe--cChhhHHHHHHC-----CCCeEEcCcHHHHHHHHHHHHh
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYARA--QDMMHLLDLKKA-----GATDAILENAETSLQLGSKLLK 673 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiara--~~~~~~~~L~~~-----Gad~Vi~p~~~~~~~la~~~l~ 673 (791)
=.++. +.....+..+.+.+ ++++.-. -+++..+.++++ ++-.++.|+.-.|..+..++.+
T Consensus 51 DfT~p-~a~~~~~~~a~~~g--~~~VigTTG~~~e~~~~l~~aa~~~~~~~vv~a~N~siGv~ll~~l~~ 117 (245)
T 1p9l_A 51 DFTHP-DVVMGNLEFLIDNG--IHAVVGTTGFTAERFQQVESWLVAKPNTSVLIAPNFAIGAVLSMHFAK 117 (245)
T ss_dssp ECSCT-TTHHHHHHHHHHTT--CEEEECCCCCCHHHHHHHHHHHHTSTTCEEEECSCCCHHHHHHHHHHH
T ss_pred EccCh-HHHHHHHHHHHHcC--CCEEEcCCCCCHHHHHHHHHHHHhCCCCCEEEECCccHHHHHHHHHHH
Confidence 45533 33344444555554 4544422 345555566554 6777899997666666555543
No 268
>3mt5_A Potassium large conductance calcium-activated CHA subfamily M, alpha member 1; potassium channel, membrane protein, transport protein; 3.00A {Homo sapiens} PDB: 3u6n_A
Probab=91.76 E-value=0.13 Score=60.55 Aligned_cols=119 Identities=19% Similarity=0.073 Sum_probs=80.8
Q ss_pred ccCCCCEEEeCCChh------HHHHHHHhhhhccCCCCCCCCCCcEEEEcC-ChhhHHHHHh----cCCCEEEccCCCHH
Q 003861 528 YEGSEPVVIVGFGQM------GQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSVVKESRK----LGFPILYGDASRPA 596 (791)
Q Consensus 528 ~~~~~~viI~G~G~~------G~~la~~L~~~~~~~~~~~~~g~~vvvID~-d~~~v~~~~~----~~~~~v~GD~t~~~ 596 (791)
...++|+|||++|.- =+....-|+ -...+-++=.++|++-. +.-+ ++++. ..+.++.|.+...+
T Consensus 374 ~~~~~HivvC~~~~~~s~~~gl~~fvmpLR----asn~~~~elk~IV~lg~~~~~~-~ew~~l~nfp~iy~~~Gspl~~~ 448 (726)
T 3mt5_A 374 TVLSGHVVVCIFGDVSSALIGLRNLVMPLR----ASNFHYHELKHIVFVGSIEYLK-REWETLHNFPKVSILPGTPLSRA 448 (726)
T ss_dssp SCCCSCEEEEEECCTTSCCCCTHHHHTGGG----BTTSCGGGCCCEEEEECHHHHH-HHHHHHTTSSSEEEEESCTTCHH
T ss_pred hcccCcEEEEEecCCCCcchhhhhheeecc----cccCCHhHcCCEEEECCCccCH-HHHHHHhcCCceEEecCCcCChH
Confidence 468899999999875 233444444 22221122335555543 4433 44553 34668899999999
Q ss_pred HHHhcCCCCCcEEEEEeCC----------HHHHHHHHHHHHHh-------------------------------------
Q 003861 597 VLLSAGITSPKAVMIMYTD----------KKRTIEAVQRLRLA------------------------------------- 629 (791)
Q Consensus 597 ~L~~agi~~a~~viv~~~~----------d~~n~~~~~~ar~l------------------------------------- 629 (791)
-|++|||..|+..|+.... |.++++++++.|.+
T Consensus 449 dL~~~~i~~c~~cvils~~~~~~~~~~l~D~e~ila~lni~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (726)
T 3mt5_A 449 DLRAVNINLCDMCVILSANQNNIDDTSLQDKECILASLNIKSMQFDDSIGVLQANSQGFTPPGMDRSSPDNSPVHGMLRQ 528 (726)
T ss_dssp HHHHTTGGGCSEEEEEECC----------CHHHHHHHHHHHTCEEC----------------------------------
T ss_pred hHHHhCHhhCCEEEEecCCCCCcCCcccchhhhhhhhhcccccccccccccccccccccccccccccccccCccchhhhc
Confidence 9999999999988777542 45667777666664
Q ss_pred -----CCCCcEEEEecChhhHHHHHHC
Q 003861 630 -----FPAIPIYARAQDMMHLLDLKKA 651 (791)
Q Consensus 630 -----~p~~~iiara~~~~~~~~L~~~ 651 (791)
+++++++....++.+.+.|.+.
T Consensus 529 ~~~~~~~~i~iitEL~~~sni~fl~~~ 555 (726)
T 3mt5_A 529 PSITTGVNIPIITELVNDTNVQFLDQD 555 (726)
T ss_dssp -CCEEGGGSCEEEEESCGGGGTTSCSS
T ss_pred ccccccCCCceEEEecCCccceeeeec
Confidence 3456888988999998888764
No 269
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=91.75 E-value=0.18 Score=53.93 Aligned_cols=67 Identities=21% Similarity=0.258 Sum_probs=49.1
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcC-ChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~-d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
+++.|+|+|++|+.+++.|. ..|.+|++.|. +++. +.+.+.|... .+ +-++.+ +++|.|+
T Consensus 147 ~~vgIIG~G~IG~~~A~~l~----------~~G~~V~~~d~~~~~~-~~~~~~g~~~--~~-~l~ell-----~~aDvVi 207 (320)
T 1gdh_A 147 KTLGIYGFGSIGQALAKRAQ----------GFDMDIDYFDTHRASS-SDEASYQATF--HD-SLDSLL-----SVSQFFS 207 (320)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------TTTCEEEEECSSCCCH-HHHHHHTCEE--CS-SHHHHH-----HHCSEEE
T ss_pred CEEEEECcCHHHHHHHHHHH----------HCCCEEEEECCCCcCh-hhhhhcCcEE--cC-CHHHHH-----hhCCEEE
Confidence 46999999999999999998 88999999999 8876 3444556532 11 223344 3678888
Q ss_pred EEeCCHH
Q 003861 611 IMYTDKK 617 (791)
Q Consensus 611 v~~~~d~ 617 (791)
++.+..+
T Consensus 208 l~~p~~~ 214 (320)
T 1gdh_A 208 LNAPSTP 214 (320)
T ss_dssp ECCCCCT
T ss_pred EeccCch
Confidence 8887643
No 270
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=91.73 E-value=0.17 Score=52.44 Aligned_cols=74 Identities=16% Similarity=0.190 Sum_probs=56.4
Q ss_pred CCCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-----CCCEEEccCCCHHHHHhc--
Q 003861 530 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-----GFPILYGDASRPAVLLSA-- 601 (791)
Q Consensus 530 ~~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-----~~~~v~GD~t~~~~L~~a-- 601 (791)
+++.++|.|. |.+|+.+++.|. ++|++|++++.+++..+++.+. ....+.+|.+|++.++++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~La----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 89 (272)
T 2nwq_A 20 MSSTLFITGATSGFGEACARRFA----------EAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVD 89 (272)
T ss_dssp -CCEEEESSTTTSSHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHH
T ss_pred cCcEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 3456888876 689999999998 8899999999999887665432 466789999999887764
Q ss_pred CC----CCCcEEEEEe
Q 003861 602 GI----TSPKAVMIMY 613 (791)
Q Consensus 602 gi----~~a~~viv~~ 613 (791)
.+ .+.|.+|-..
T Consensus 90 ~~~~~~g~iD~lvnnA 105 (272)
T 2nwq_A 90 NLPEEFATLRGLINNA 105 (272)
T ss_dssp TCCGGGSSCCEEEECC
T ss_pred HHHHHhCCCCEEEECC
Confidence 22 3468776654
No 271
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=91.71 E-value=1.1 Score=47.14 Aligned_cols=130 Identities=13% Similarity=0.122 Sum_probs=78.0
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHH----HHHhc----CCC-EEEccCCCHHHHHhc
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVK----ESRKL----GFP-ILYGDASRPAVLLSA 601 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~----~~~~~----~~~-~v~GD~t~~~~L~~a 601 (791)
++.|+|.|.+|..++..|. ..|. +++++|.++++++ ++.+. ..+ -+.+. +|.+
T Consensus 2 kI~ViGaG~vG~~la~~l~----------~~~~~~~v~L~D~~~~~~~g~~~dl~~~~~~~~~~~~i~~t-~d~~----- 65 (294)
T 1oju_A 2 KLGFVGAGRVGSTSAFTCL----------LNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGG-ADYS----- 65 (294)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEE-SCGG-----
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCCeEEEEECChHHHHHHHHHHHhhhhhcCCCCEEEEe-CCHH-----
Confidence 4789999999999999997 5666 8999999999865 12221 111 23321 2233
Q ss_pred CCCCCcEEEEEeCC---------H--HHHHHH----HHHHHHhCCCCcEEEEecChhhHH--HH-HHCC--CCeEEcC-c
Q 003861 602 GITSPKAVMIMYTD---------K--KRTIEA----VQRLRLAFPAIPIYARAQDMMHLL--DL-KKAG--ATDAILE-N 660 (791)
Q Consensus 602 gi~~a~~viv~~~~---------d--~~n~~~----~~~ar~l~p~~~iiara~~~~~~~--~L-~~~G--ad~Vi~p-~ 660 (791)
.+++||.+|++.+. | ..|..+ +..+++.+|+..++... ||-+.- .+ +..| .++|+-- .
T Consensus 66 a~~~aDiVViaag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs-NPvd~~t~~~~k~~g~p~~rviG~gt 144 (294)
T 1oju_A 66 LLKGSEIIVVTAGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT-NPMDVMTYIMWKESGKPRNEVFGMGN 144 (294)
T ss_dssp GGTTCSEEEECCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS-SSHHHHHHHHHHHSCCCTTSEEECSH
T ss_pred HhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC-CcchHHHHHHHHhcCCCHHHEeeccc
Confidence 35789998888643 1 345443 44566678886655544 554432 23 3334 4566665 2
Q ss_pred HHHHHHHHHHHHhhcCCChH
Q 003861 661 AETSLQLGSKLLKGFGVMSD 680 (791)
Q Consensus 661 ~~~~~~la~~~l~~l~~~~~ 680 (791)
.+-..|+-..+- .+++++.
T Consensus 145 ~LD~~R~~~~la-~l~v~~~ 163 (294)
T 1oju_A 145 QLDSQRLKERLY-NAGARNI 163 (294)
T ss_dssp HHHHHHHHHHHH-HTTCBSC
T ss_pred ccHHHHHHHHHH-HhCCCcc
Confidence 333344444444 6666663
No 272
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=91.71 E-value=0.13 Score=55.24 Aligned_cols=70 Identities=10% Similarity=0.158 Sum_probs=50.0
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCC-------CcEEEEcCChh-----hHHHHHhcCCCE-----------E
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG-------WPFVAFDLNPS-----VVKESRKLGFPI-----------L 588 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g-------~~vvvID~d~~-----~v~~~~~~~~~~-----------v 588 (791)
.++.|+|.|.+|..++..|. +.| ++|+++|.+++ ..+.+++.+... +
T Consensus 9 mkI~iIG~G~mG~~~a~~l~----------~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 78 (354)
T 1x0v_A 9 KKVCIVGSGNWGSAIAKIVG----------GNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNV 78 (354)
T ss_dssp EEEEEECCSHHHHHHHHHHH----------HHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTE
T ss_pred CeEEEECCCHHHHHHHHHHH----------hcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCe
Confidence 36999999999999999998 677 89999999998 777776532110 1
Q ss_pred EccCCCHHHHHhcCCCCCcEEEEEeCCH
Q 003861 589 YGDASRPAVLLSAGITSPKAVMIMYTDK 616 (791)
Q Consensus 589 ~GD~t~~~~L~~agi~~a~~viv~~~~d 616 (791)
... +|.+ + -++++|.|++++.+.
T Consensus 79 ~~~-~~~~---~-~~~~aD~Vilav~~~ 101 (354)
T 1x0v_A 79 VAV-PDVV---Q-AAEDADILIFVVPHQ 101 (354)
T ss_dssp EEE-SSHH---H-HHTTCSEEEECCCGG
T ss_pred EEE-cCHH---H-HHcCCCEEEEeCCHH
Confidence 110 2221 1 135799999999864
No 273
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=91.70 E-value=0.36 Score=51.59 Aligned_cols=66 Identities=18% Similarity=0.245 Sum_probs=46.2
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.+.|+|+|++|+.+|+.|+ ..|.+|++.|.+++..+. ....+.-.+-++.+ +++|.|+
T Consensus 137 gktvGIiGlG~IG~~vA~~l~----------~~G~~V~~~dr~~~~~~~-----~~~~~~~~~l~ell-----~~aDvV~ 196 (324)
T 3evt_A 137 GQQLLIYGTGQIGQSLAAKAS----------ALGMHVIGVNTTGHPADH-----FHETVAFTATADAL-----ATANFIV 196 (324)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSCCCCTT-----CSEEEEGGGCHHHH-----HHCSEEE
T ss_pred CCeEEEECcCHHHHHHHHHHH----------hCCCEEEEECCCcchhHh-----HhhccccCCHHHHH-----hhCCEEE
Confidence 346999999999999999998 889999999998765331 22222212223344 4578888
Q ss_pred EEeCCH
Q 003861 611 IMYTDK 616 (791)
Q Consensus 611 v~~~~d 616 (791)
++.+..
T Consensus 197 l~lPlt 202 (324)
T 3evt_A 197 NALPLT 202 (324)
T ss_dssp ECCCCC
T ss_pred EcCCCc
Confidence 877653
No 274
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=91.69 E-value=0.2 Score=50.79 Aligned_cols=72 Identities=8% Similarity=0.185 Sum_probs=54.9
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc---CC-CEEEccCCCHHHHHhcC----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GF-PILYGDASRPAVLLSAG---- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~---~~-~~v~GD~t~~~~L~~ag---- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+...+. .. ..+.+|.+|++.++++-
T Consensus 12 k~vlITGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 81 (254)
T 2wsb_A 12 ACAAVTGAGSGIGLEICRAFA----------ASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAE 81 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHH
Confidence 35777765 789999999998 7899999999999877655432 23 67899999999887641
Q ss_pred -CCCCcEEEEEe
Q 003861 603 -ITSPKAVMIMY 613 (791)
Q Consensus 603 -i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 82 ~~~~id~li~~A 93 (254)
T 2wsb_A 82 AVAPVSILVNSA 93 (254)
T ss_dssp HHSCCCEEEECC
T ss_pred hhCCCcEEEECC
Confidence 24678777654
No 275
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=91.66 E-value=0.13 Score=55.58 Aligned_cols=81 Identities=12% Similarity=0.128 Sum_probs=52.8
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+.+.|+|+|++|+.+|+.|+ ..|.+|++.|.++...+... +... . .+.+.+ ++++|.|++
T Consensus 174 ktvGIIGlG~IG~~vA~~l~----------~~G~~V~~~dr~~~~~~~~~--g~~~--~--~~l~el----l~~sDvV~l 233 (345)
T 4g2n_A 174 RRLGIFGMGRIGRAIATRAR----------GFGLAIHYHNRTRLSHALEE--GAIY--H--DTLDSL----LGASDIFLI 233 (345)
T ss_dssp CEEEEESCSHHHHHHHHHHH----------TTTCEEEEECSSCCCHHHHT--TCEE--C--SSHHHH----HHTCSEEEE
T ss_pred CEEEEEEeChhHHHHHHHHH----------HCCCEEEEECCCCcchhhhc--CCeE--e--CCHHHH----HhhCCEEEE
Confidence 46999999999999999998 89999999999875443322 3322 1 222222 256888888
Q ss_pred EeCCHHHH--HHHHHHHHHhCCC
Q 003861 612 MYTDKKRT--IEAVQRLRLAFPA 632 (791)
Q Consensus 612 ~~~~d~~n--~~~~~~ar~l~p~ 632 (791)
+++..+++ +.-....+.+.|+
T Consensus 234 ~~Plt~~T~~li~~~~l~~mk~g 256 (345)
T 4g2n_A 234 AAPGRPELKGFLDHDRIAKIPEG 256 (345)
T ss_dssp CSCCCGGGTTCBCHHHHHHSCTT
T ss_pred ecCCCHHHHHHhCHHHHhhCCCC
Confidence 88764332 2223344455554
No 276
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=91.63 E-value=0.28 Score=53.02 Aligned_cols=106 Identities=21% Similarity=0.161 Sum_probs=66.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.++|.|+|++|+.+++.|. +.|.+|++.|.|+++.+..++.+...+ +..+.|. .++|.++
T Consensus 175 GktV~I~G~GnVG~~~A~~l~----------~~GakVvvsD~~~~~~~~a~~~ga~~v----~~~ell~----~~~DIli 236 (355)
T 1c1d_A 175 GLTVLVQGLGAVGGSLASLAA----------EAGAQLLVADTDTERVAHAVALGHTAV----ALEDVLS----TPCDVFA 236 (355)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCEEC----CGGGGGG----CCCSEEE
T ss_pred CCEEEEECcCHHHHHHHHHHH----------HCCCEEEEEeCCccHHHHHHhcCCEEe----ChHHhhc----Cccceec
Confidence 457999999999999999998 889999999999886333334443332 1234443 3788765
Q ss_pred EEeCCHHHHHHHHHHHHHhCCCCcEEEEec-----ChhhHHHHHHCCCCeEEcCcH
Q 003861 611 IMYTDKKRTIEAVQRLRLAFPAIPIYARAQ-----DMMHLLDLKKAGATDAILENA 661 (791)
Q Consensus 611 v~~~~d~~n~~~~~~ar~l~p~~~iiara~-----~~~~~~~L~~~Gad~Vi~p~~ 661 (791)
-+......|. ..++.+. .++++..- +++..+.|++-|+ ++.|..
T Consensus 237 P~A~~~~I~~---~~~~~lk--~~iVie~AN~p~t~~eA~~~L~~~gI--lv~Pd~ 285 (355)
T 1c1d_A 237 PCAMGGVITT---EVARTLD--CSVVAGAANNVIADEAASDILHARGI--LYAPDF 285 (355)
T ss_dssp ECSCSCCBCH---HHHHHCC--CSEECCSCTTCBCSHHHHHHHHHTTC--EECCHH
T ss_pred HhHHHhhcCH---HHHhhCC--CCEEEECCCCCCCCHHHHHHHHhCCE--EEECCe
Confidence 4433222222 2334443 46666433 2355777888775 566764
No 277
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=91.63 E-value=0.17 Score=52.71 Aligned_cols=111 Identities=14% Similarity=-0.043 Sum_probs=65.0
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-CC--CEEEccCCCHHHHHhcCCCCCc
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GF--PILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-~~--~~v~GD~t~~~~L~~agi~~a~ 607 (791)
.++++|+|.|.+|+.++..|. +.|.+|++.+.++++.+++.+. +. .+...| .+.+. . .++|
T Consensus 119 ~~~vlvlGaGg~g~a~a~~L~----------~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~---~~~~~--~-~~~D 182 (272)
T 1p77_A 119 NQHVLILGAGGATKGVLLPLL----------QAQQNIVLANRTFSKTKELAERFQPYGNIQAVS---MDSIP--L-QTYD 182 (272)
T ss_dssp TCEEEEECCSHHHHTTHHHHH----------HTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEE---GGGCC--C-SCCS
T ss_pred CCEEEEECCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHccccCCeEEee---HHHhc--c-CCCC
Confidence 357999999999999999998 7889999999999988776532 11 221222 11111 1 4899
Q ss_pred EEEEEeCCHHH-HHH-HHHHHHHhCCCCcEEEEecChhh----HHHHHHCCCCeEEcC
Q 003861 608 AVMIMYTDKKR-TIE-AVQRLRLAFPAIPIYARAQDMMH----LLDLKKAGATDAILE 659 (791)
Q Consensus 608 ~viv~~~~d~~-n~~-~~~~ar~l~p~~~iiara~~~~~----~~~L~~~Gad~Vi~p 659 (791)
.+|.+++.... +.. +-. ....++..++=-..++.. .+..++.|+..++.-
T Consensus 183 ivIn~t~~~~~~~~~~i~~--~~l~~~~~v~D~~y~p~~~t~ll~~a~~~G~~~~v~G 238 (272)
T 1p77_A 183 LVINATSAGLSGGTASVDA--EILKLGSAFYDMQYAKGTDTPFIALCKSLGLTNVSDG 238 (272)
T ss_dssp EEEECCCC-------CCCH--HHHHHCSCEEESCCCTTSCCHHHHHHHHTTCCCEECS
T ss_pred EEEECCCCCCCCCCCCCCH--HHcCCCCEEEEeeCCCCcCCHHHHHHHHcCCCEeeCC
Confidence 99888886532 110 000 011122233333333333 455677898745554
No 278
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=91.63 E-value=0.11 Score=56.11 Aligned_cols=69 Identities=20% Similarity=0.294 Sum_probs=49.7
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++.|+|+|++|+.+++.+.+ ..|.+|++.|.+++..+...+.|.... + +-++.+ +++|.|++
T Consensus 164 ~~vgIIG~G~IG~~vA~~l~~---------~~G~~V~~~d~~~~~~~~~~~~g~~~~--~-~l~ell-----~~aDvVil 226 (348)
T 2w2k_A 164 HVLGAVGLGAIQKEIARKAVH---------GLGMKLVYYDVAPADAETEKALGAERV--D-SLEELA-----RRSDCVSV 226 (348)
T ss_dssp CEEEEECCSHHHHHHHHHHHH---------TTCCEEEEECSSCCCHHHHHHHTCEEC--S-SHHHHH-----HHCSEEEE
T ss_pred CEEEEEEECHHHHHHHHHHHH---------hcCCEEEEECCCCcchhhHhhcCcEEe--C-CHHHHh-----ccCCEEEE
Confidence 469999999999999999951 478999999999877666555554432 1 222334 36788888
Q ss_pred EeCCHH
Q 003861 612 MYTDKK 617 (791)
Q Consensus 612 ~~~~d~ 617 (791)
+++.+.
T Consensus 227 ~vp~~~ 232 (348)
T 2w2k_A 227 SVPYMK 232 (348)
T ss_dssp CCCCSG
T ss_pred eCCCCh
Confidence 887643
No 279
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=91.63 E-value=0.11 Score=55.92 Aligned_cols=65 Identities=18% Similarity=0.267 Sum_probs=48.7
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
.++.|+|+|++|+.+++.|. ..|.+|++.|.+++. +...+.|... . +-++.+ +++|.|++
T Consensus 147 ~~vgIIG~G~iG~~vA~~l~----------~~G~~V~~~d~~~~~-~~~~~~g~~~---~-~l~e~l-----~~aDiVil 206 (333)
T 2d0i_A 147 KKVGILGMGAIGKAIARRLI----------PFGVKLYYWSRHRKV-NVEKELKARY---M-DIDELL-----EKSDIVIL 206 (333)
T ss_dssp CEEEEECCSHHHHHHHHHHG----------GGTCEEEEECSSCCH-HHHHHHTEEE---C-CHHHHH-----HHCSEEEE
T ss_pred CEEEEEccCHHHHHHHHHHH----------HCCCEEEEECCCcch-hhhhhcCcee---c-CHHHHH-----hhCCEEEE
Confidence 46999999999999999998 889999999999886 4444445321 1 222333 46888888
Q ss_pred EeCCH
Q 003861 612 MYTDK 616 (791)
Q Consensus 612 ~~~~d 616 (791)
+++.+
T Consensus 207 ~vp~~ 211 (333)
T 2d0i_A 207 ALPLT 211 (333)
T ss_dssp CCCCC
T ss_pred cCCCC
Confidence 88775
No 280
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=91.59 E-value=0.32 Score=50.22 Aligned_cols=72 Identities=18% Similarity=0.064 Sum_probs=54.5
Q ss_pred CCEEEeCC---ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh---hHHHHHh--cCCCEEEccCCCHHHHHhc--
Q 003861 532 EPVVIVGF---GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS---VVKESRK--LGFPILYGDASRPAVLLSA-- 601 (791)
Q Consensus 532 ~~viI~G~---G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~---~v~~~~~--~~~~~v~GD~t~~~~L~~a-- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++ ..+++.+ ....++.+|.+|++.++++
T Consensus 7 k~vlVTGas~~~gIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~ 76 (275)
T 2pd4_A 7 KKGLIVGVANNKSIAYGIAQSCF----------NQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYN 76 (275)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHH----------TTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHH
Confidence 46888897 599999999998 88999999999876 4454443 2367899999999877653
Q ss_pred ----CCCCCcEEEEEe
Q 003861 602 ----GITSPKAVMIMY 613 (791)
Q Consensus 602 ----gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 77 ~~~~~~g~id~lv~nA 92 (275)
T 2pd4_A 77 SVKKDLGSLDFIVHSV 92 (275)
T ss_dssp HHHHHTSCEEEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 123667776654
No 281
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=91.58 E-value=0.25 Score=50.98 Aligned_cols=61 Identities=16% Similarity=0.181 Sum_probs=45.7
Q ss_pred CCCCE-EEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hcC--CCEEEccCCCHHHHHh
Q 003861 530 GSEPV-VIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KLG--FPILYGDASRPAVLLS 600 (791)
Q Consensus 530 ~~~~v-iI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~~--~~~v~GD~t~~~~L~~ 600 (791)
+++++ +|-|. +-+|+.+|+.|. ++|.+|++.|.|++..++.. +.| ...+.+|.+|++..++
T Consensus 5 L~gKvalVTGas~GIG~aiA~~la----------~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~ 73 (254)
T 4fn4_A 5 LKNKVVIVTGAGSGIGRAIAKKFA----------LNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEE 73 (254)
T ss_dssp GTTCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH----------HcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHH
Confidence 45554 44455 569999999998 89999999999998865543 334 3456788888887664
No 282
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=91.57 E-value=0.29 Score=49.56 Aligned_cols=104 Identities=17% Similarity=0.226 Sum_probs=63.5
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcE-EEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPF-VAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~v-vvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
++.|+|+|++|+.+++.|. +.|.++ .+.|.+++ .+ + . .+|.+.+-+ .++|+|++
T Consensus 2 ~vgiIG~G~mG~~~~~~l~----------~~g~~lv~v~d~~~~-~~---~-----~---~~~~~~l~~---~~~DvVv~ 56 (236)
T 2dc1_A 2 LVGLIGYGAIGKFLAEWLE----------RNGFEIAAILDVRGE-HE---K-----M---VRGIDEFLQ---REMDVAVE 56 (236)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEEECSSCC-CT---T-----E---ESSHHHHTT---SCCSEEEE
T ss_pred EEEEECCCHHHHHHHHHHh----------cCCCEEEEEEecCcc-hh---h-----h---cCCHHHHhc---CCCCEEEE
Confidence 4789999999999999997 678887 57888752 21 1 2 234443322 68999999
Q ss_pred EeCCHHHHHHHHHHHHHhCCCCcEEEEec----C----hhhHHHHHHCCCCeEEcCcHHHH
Q 003861 612 MYTDKKRTIEAVQRLRLAFPAIPIYARAQ----D----MMHLLDLKKAGATDAILENAETS 664 (791)
Q Consensus 612 ~~~~d~~n~~~~~~ar~l~p~~~iiara~----~----~~~~~~L~~~Gad~Vi~p~~~~~ 664 (791)
+++++ .....+..+.+. +.+++.... + .+-.+..++.|....+.+....+
T Consensus 57 ~~~~~-~~~~~~~~~l~~--G~~vv~~~~~~~~~~~~~~~l~~~a~~~g~~~~i~~~~~g~ 114 (236)
T 2dc1_A 57 AASQQ-AVKDYAEKILKA--GIDLIVLSTGAFADRDFLSRVREVCRKTGRRVYIASGAIGG 114 (236)
T ss_dssp CSCHH-HHHHHHHHHHHT--TCEEEESCGGGGGSHHHHHHHHHHHHHHCCCEEECCTTCSC
T ss_pred CCCHH-HHHHHHHHHHHC--CCcEEEECcccCChHHHHHHHHHHHHhcCCeEEecCccccC
Confidence 99875 334444444443 345665422 1 12223345567775566654433
No 283
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=91.56 E-value=0.26 Score=50.56 Aligned_cols=72 Identities=13% Similarity=0.035 Sum_probs=54.0
Q ss_pred CCEEEeCC---ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCCh---hhHHHHHhc--CCCEEEccCCCHHHHHhc--
Q 003861 532 EPVVIVGF---GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP---SVVKESRKL--GFPILYGDASRPAVLLSA-- 601 (791)
Q Consensus 532 ~~viI~G~---G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~---~~v~~~~~~--~~~~v~GD~t~~~~L~~a-- 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.++ +..+++.+. ...++.+|.+|++.++++
T Consensus 10 k~vlVTGas~~~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~ 79 (265)
T 1qsg_A 10 KRILVTGVASKLSIAYGIAQAMH----------REGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFA 79 (265)
T ss_dssp CEEEECCCCSTTSHHHHHHHHHH----------HTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHH----------HCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHH
Confidence 46888887 589999999998 8899999999987 445555432 357889999999877653
Q ss_pred ----CCCCCcEEEEEe
Q 003861 602 ----GITSPKAVMIMY 613 (791)
Q Consensus 602 ----gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 80 ~~~~~~g~iD~lv~~A 95 (265)
T 1qsg_A 80 ELGKVWPKFDGFVHSI 95 (265)
T ss_dssp HHHTTCSSEEEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 223678776654
No 284
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=91.54 E-value=0.55 Score=42.69 Aligned_cols=98 Identities=16% Similarity=0.170 Sum_probs=62.6
Q ss_pred CCCCcEEEEcCChhhHHHH----HhcC-CCEEEccCCCHHHHHhcCC--CCCcEEEEEeCC-HHHHHHHHHHHHHhCCCC
Q 003861 562 TVGWPFVAFDLNPSVVKES----RKLG-FPILYGDASRPAVLLSAGI--TSPKAVMIMYTD-KKRTIEAVQRLRLAFPAI 633 (791)
Q Consensus 562 ~~g~~vvvID~d~~~v~~~----~~~~-~~~v~GD~t~~~~L~~agi--~~a~~viv~~~~-d~~n~~~~~~ar~l~p~~ 633 (791)
..+..|+++|.|+...+.+ ++.| +.+... .+..+.+....- ...|.+++-..- +.....++..+|+.+|++
T Consensus 18 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~~v~~~-~~~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ 96 (146)
T 4dad_A 18 QGMINILVASEDASRLAHLARLVGDAGRYRVTRT-VGRAAQIVQRTDGLDAFDILMIDGAALDTAELAAIEKLSRLHPGL 96 (146)
T ss_dssp GGGCEEEEECSCHHHHHHHHHHHHHHCSCEEEEE-CCCHHHHTTCHHHHTTCSEEEEECTTCCHHHHHHHHHHHHHCTTC
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHhhCCCeEEEEe-CCHHHHHHHHHhcCCCCCEEEEeCCCCCccHHHHHHHHHHhCCCC
Confidence 4456677777777654433 3455 555543 233334444322 678888777653 355677888999999999
Q ss_pred cEEEEecC--hhhHHHHHHCCCCeEEcCc
Q 003861 634 PIYARAQD--MMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 634 ~iiara~~--~~~~~~L~~~Gad~Vi~p~ 660 (791)
++|+-... .+......++||+..+.-.
T Consensus 97 ~ii~lt~~~~~~~~~~~~~~ga~~~l~Kp 125 (146)
T 4dad_A 97 TCLLVTTDASSQTLLDAMRAGVRDVLRWP 125 (146)
T ss_dssp EEEEEESCCCHHHHHHHHTTTEEEEEESS
T ss_pred cEEEEeCCCCHHHHHHHHHhCCceeEcCC
Confidence 97776654 4555667789999876544
No 285
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=91.54 E-value=0.23 Score=50.73 Aligned_cols=72 Identities=14% Similarity=-0.007 Sum_probs=55.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc---CCCEEEccCCCHHHHHhcC-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~---~~~~v~GD~t~~~~L~~ag----- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..++..+. ....+.+|.+|++.++++=
T Consensus 6 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 75 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAV----------AAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYARE 75 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHH
Confidence 35777776 789999999998 8899999999999887765432 3567889999998776541
Q ss_pred -CCCCcEEEEEe
Q 003861 603 -ITSPKAVMIMY 613 (791)
Q Consensus 603 -i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 76 ~~g~iD~lv~nA 87 (254)
T 1hdc_A 76 EFGSVDGLVNNA 87 (254)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 23678777654
No 286
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=91.51 E-value=0.22 Score=50.27 Aligned_cols=73 Identities=10% Similarity=0.038 Sum_probs=55.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+.+.+ ....++.+|.+|++.++++=
T Consensus 8 ~~vlVtGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLA----------SAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFE 77 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHH
Confidence 35777765 789999999998 789999999999887655432 23567889999998877641
Q ss_pred -----CCCCcEEEEEeC
Q 003861 603 -----ITSPKAVMIMYT 614 (791)
Q Consensus 603 -----i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 78 ~~~~~~~~~d~vi~~Ag 94 (248)
T 2pnf_A 78 EIYNLVDGIDILVNNAG 94 (248)
T ss_dssp HHHHHSSCCSEEEECCC
T ss_pred HHHHhcCCCCEEEECCC
Confidence 236787776553
No 287
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=91.49 E-value=0.12 Score=52.93 Aligned_cols=70 Identities=17% Similarity=0.177 Sum_probs=55.4
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhc--CCCCCcEE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSA--GITSPKAV 609 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~a--gi~~a~~v 609 (791)
.++|-|. +-+|+.+++.|. ++|.+|++.|.|++..+...+.....+.+|.+|++..+++ .+.+-|.+
T Consensus 13 ~alVTGas~GIG~aia~~la----------~~Ga~Vv~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiL 82 (242)
T 4b79_A 13 QVLVTGGSSGIGAAIAMQFA----------ELGAEVVALGLDADGVHAPRHPRIRREELDITDSQRLQRLFEALPRLDVL 82 (242)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSTTSTTSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEE
T ss_pred EEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHhhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEE
Confidence 4555565 579999999998 8999999999999987766666777889999999877664 45567766
Q ss_pred EEE
Q 003861 610 MIM 612 (791)
Q Consensus 610 iv~ 612 (791)
|-.
T Consensus 83 VNN 85 (242)
T 4b79_A 83 VNN 85 (242)
T ss_dssp EEC
T ss_pred EEC
Confidence 543
No 288
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=91.47 E-value=0.18 Score=51.40 Aligned_cols=72 Identities=14% Similarity=0.061 Sum_probs=54.4
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc---CCCEEEccCCCHHHHHhc--C---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSA--G--- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~---~~~~v~GD~t~~~~L~~a--g--- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+++.+. ....+.+|.+|++.++++ .
T Consensus 7 k~vlVTGas~giG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLL----------GEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQR 76 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 35777776 789999999998 7899999999999887665432 456788999999876643 1
Q ss_pred -CCCCcEEEEEe
Q 003861 603 -ITSPKAVMIMY 613 (791)
Q Consensus 603 -i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 77 ~~g~id~lv~~A 88 (253)
T 1hxh_A 77 RLGTLNVLVNNA 88 (253)
T ss_dssp HHCSCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 23567776554
No 289
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=91.47 E-value=0.13 Score=56.48 Aligned_cols=67 Identities=12% Similarity=0.038 Sum_probs=49.2
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++.|+|+|++|+.+++.|+ ..|.+|++.|.+++..+...+.|.... .+.+.+ ++++|.|++
T Consensus 192 ktvGIIGlG~IG~~vA~~l~----------a~G~~V~~~d~~~~~~~~~~~~G~~~~----~~l~el----l~~aDvV~l 253 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRLA----------PFDVHLHYTDRHRLPESVEKELNLTWH----ATREDM----YPVCDVVTL 253 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHG----------GGTCEEEEECSSCCCHHHHHHHTCEEC----SSHHHH----GGGCSEEEE
T ss_pred CEEEEEeECHHHHHHHHHHH----------hCCCEEEEEcCCccchhhHhhcCceec----CCHHHH----HhcCCEEEE
Confidence 46999999999999999998 889999999998766555555554421 222222 247888888
Q ss_pred EeCCH
Q 003861 612 MYTDK 616 (791)
Q Consensus 612 ~~~~d 616 (791)
+.+..
T Consensus 254 ~~Plt 258 (393)
T 2nac_A 254 NCPLH 258 (393)
T ss_dssp CSCCC
T ss_pred ecCCc
Confidence 88754
No 290
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=91.46 E-value=0.24 Score=50.77 Aligned_cols=73 Identities=12% Similarity=0.106 Sum_probs=55.9
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhc------
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~a------ 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ .....+.+|.+|++.++++
T Consensus 9 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 78 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYV----------REGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVE 78 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 45777776 789999999998 899999999999998776543 2456788999999876653
Q ss_pred CCCCCcEEEEEeC
Q 003861 602 GITSPKAVMIMYT 614 (791)
Q Consensus 602 gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 79 ~~g~id~lv~~Ag 91 (259)
T 4e6p_A 79 HAGGLDILVNNAA 91 (259)
T ss_dssp HSSSCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 1236787776543
No 291
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=91.46 E-value=0.13 Score=55.70 Aligned_cols=72 Identities=21% Similarity=0.113 Sum_probs=56.4
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCC-CcEEEEcCChhhH-HHHH-hcCCCEEEccCCCHHHHHhcCCCCCc
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSVV-KESR-KLGFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g-~~vvvID~d~~~v-~~~~-~~~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
.+++|.|. |-+|+.+++.|. +.| ++|++++.+++.. +.+. ..+..++.+|.+|++.++++ ++++|
T Consensus 33 ~~ilVtGatG~iG~~l~~~L~----------~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~-~~~~d 101 (377)
T 2q1s_A 33 TNVMVVGGAGFVGSNLVKRLL----------ELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASL-QDEYD 101 (377)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHC-CSCCS
T ss_pred CEEEEECCccHHHHHHHHHHH----------HcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHH-hhCCC
Confidence 35888886 999999999998 789 9999999876542 1121 34577889999999999876 45899
Q ss_pred EEEEEeC
Q 003861 608 AVMIMYT 614 (791)
Q Consensus 608 ~viv~~~ 614 (791)
+||-+..
T Consensus 102 ~Vih~A~ 108 (377)
T 2q1s_A 102 YVFHLAT 108 (377)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 8887654
No 292
>3cnb_A DNA-binding response regulator, MERR family; signal receiver domain, DNA binding protein, protein structu initiative, PSI-2; 2.00A {Colwellia psychrerythraea}
Probab=91.46 E-value=0.72 Score=41.40 Aligned_cols=99 Identities=9% Similarity=0.040 Sum_probs=64.1
Q ss_pred CCCCcEEEEcCChhhHHHH----Hh-cCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC-HHHHHHHHHHHHH--hCCCC
Q 003861 562 TVGWPFVAFDLNPSVVKES----RK-LGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRL--AFPAI 633 (791)
Q Consensus 562 ~~g~~vvvID~d~~~v~~~----~~-~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~-d~~n~~~~~~ar~--l~p~~ 633 (791)
.....+.++|.|+...+.+ ++ .|+..+..-.+-.+.++.+.-...|.+++-..- +......+..+|+ .++++
T Consensus 6 ~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~~ 85 (143)
T 3cnb_A 6 KNDFSILIIEDDKEFADMLTQFLENLFPYAKIKIAYNPFDAGDLLHTVKPDVVMLDLMMVGMDGFSICHRIKSTPATANI 85 (143)
T ss_dssp ---CEEEEECSCHHHHHHHHHHHHHHCTTCEEEEECSHHHHHHHHHHTCCSEEEEETTCTTSCHHHHHHHHHTSTTTTTS
T ss_pred cCCceEEEEECCHHHHHHHHHHHHhccCccEEEEECCHHHHHHHHHhcCCCEEEEecccCCCcHHHHHHHHHhCccccCC
Confidence 4566788999888765443 34 677733322333555665555678988887653 3355677888888 67888
Q ss_pred cEEEEecCh--hhHHHHHHCCCCeEEcCc
Q 003861 634 PIYARAQDM--MHLLDLKKAGATDAILEN 660 (791)
Q Consensus 634 ~iiara~~~--~~~~~L~~~Gad~Vi~p~ 660 (791)
++++-.... +......+.|++.++.-.
T Consensus 86 ~ii~~s~~~~~~~~~~~~~~g~~~~l~kP 114 (143)
T 3cnb_A 86 IVIAMTGALTDDNVSRIVALGAETCFGKP 114 (143)
T ss_dssp EEEEEESSCCHHHHHHHHHTTCSEEEESS
T ss_pred cEEEEeCCCCHHHHHHHHhcCCcEEEeCC
Confidence 888766544 444667889999877543
No 293
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=91.44 E-value=0.23 Score=51.30 Aligned_cols=72 Identities=15% Similarity=0.103 Sum_probs=55.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc--CCCEEEccCCCHHHHHhcC------
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL--GFPILYGDASRPAVLLSAG------ 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~--~~~~v~GD~t~~~~L~~ag------ 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+.+.+. +..++.+|.+|++.++++=
T Consensus 10 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 79 (270)
T 1yde_A 10 KVVVVTGGGRGIGAGIVRAFV----------NSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRR 79 (270)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHH
Confidence 45777775 789999999998 8899999999999887766542 4678899999998776541
Q ss_pred CCCCcEEEEEe
Q 003861 603 ITSPKAVMIMY 613 (791)
Q Consensus 603 i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 80 ~g~iD~lv~nA 90 (270)
T 1yde_A 80 FGRLDCVVNNA 90 (270)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 23567776544
No 294
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=91.43 E-value=0.097 Score=55.32 Aligned_cols=72 Identities=22% Similarity=0.210 Sum_probs=53.2
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCC-CCCcEEE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGI-TSPKAVM 610 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi-~~a~~vi 610 (791)
+++|.|. |-+|+.+++.|. +.|++|++++.+++........+..++.+|.+|++.++++=- .++|+||
T Consensus 3 ~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d~vi 72 (330)
T 2c20_A 3 SILICGGAGYIGSHAVKKLV----------DEGLSVVVVDNLQTGHEDAITEGAKFYNGDLRDKAFLRDVFTQENIEAVM 72 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCSSCCGGGSCTTSEEEECCTTCHHHHHHHHHHSCEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHH----------hCCCEEEEEeCCCcCchhhcCCCcEEEECCCCCHHHHHHHHhhcCCCEEE
Confidence 5788875 999999999998 789999999976543211111267889999999998876411 2788887
Q ss_pred EEeC
Q 003861 611 IMYT 614 (791)
Q Consensus 611 v~~~ 614 (791)
-+..
T Consensus 73 h~a~ 76 (330)
T 2c20_A 73 HFAA 76 (330)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 6654
No 295
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=91.43 E-value=0.32 Score=52.32 Aligned_cols=81 Identities=15% Similarity=0.206 Sum_probs=49.9
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+.+.|+|+|++|+.+|+.|. ..|.+|++.|.+++.. .+.. . ..+.+.+ ++++|.|++
T Consensus 172 ktiGIIGlG~IG~~vA~~l~----------~~G~~V~~~dr~~~~~-----~~~~--~--~~sl~el----l~~aDvVil 228 (340)
T 4dgs_A 172 KRIGVLGLGQIGRALASRAE----------AFGMSVRYWNRSTLSG-----VDWI--A--HQSPVDL----ARDSDVLAV 228 (340)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------TTTCEEEEECSSCCTT-----SCCE--E--CSSHHHH----HHTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------HCCCEEEEEcCCcccc-----cCce--e--cCCHHHH----HhcCCEEEE
Confidence 46899999999999999998 8999999999987651 1221 1 1222222 357898988
Q ss_pred EeCCHHHHHHH--HHHHHHhCCCCcE
Q 003861 612 MYTDKKRTIEA--VQRLRLAFPAIPI 635 (791)
Q Consensus 612 ~~~~d~~n~~~--~~~ar~l~p~~~i 635 (791)
+.+..+.+..+ ....+.+.|+..+
T Consensus 229 ~vP~t~~t~~li~~~~l~~mk~gail 254 (340)
T 4dgs_A 229 CVAASAATQNIVDASLLQALGPEGIV 254 (340)
T ss_dssp CC----------CHHHHHHTTTTCEE
T ss_pred eCCCCHHHHHHhhHHHHhcCCCCCEE
Confidence 88754333322 3445555555433
No 296
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=91.41 E-value=1.7 Score=38.91 Aligned_cols=95 Identities=11% Similarity=0.017 Sum_probs=67.6
Q ss_pred CCcEEEEcCChhhHHHH----Hh-cCCCEEEccCCCHHHHHhcCC-CCCcEEEEEeCC--HHHHHHHHHHHHH--hCCCC
Q 003861 564 GWPFVAFDLNPSVVKES----RK-LGFPILYGDASRPAVLLSAGI-TSPKAVMIMYTD--KKRTIEAVQRLRL--AFPAI 633 (791)
Q Consensus 564 g~~vvvID~d~~~v~~~----~~-~~~~~v~GD~t~~~~L~~agi-~~a~~viv~~~~--d~~n~~~~~~ar~--l~p~~ 633 (791)
...++++|.|+...+.+ ++ .|+.+...+ +-.+.++.+.- .+.|.+++-..- +..-..++..+|+ .+|++
T Consensus 4 ~~~ilivdd~~~~~~~l~~~L~~~~~~~v~~~~-~~~~a~~~l~~~~~~dlvi~D~~l~~~~~g~~~~~~l~~~~~~~~~ 82 (140)
T 3lua_A 4 DGTVLLIDYFEYEREKTKIIFDNIGEYDFIEVE-NLKKFYSIFKDLDSITLIIMDIAFPVEKEGLEVLSAIRNNSRTANT 82 (140)
T ss_dssp CCEEEEECSCHHHHHHHHHHHHHHCCCEEEEEC-SHHHHHTTTTTCCCCSEEEECSCSSSHHHHHHHHHHHHHSGGGTTC
T ss_pred CCeEEEEeCCHHHHHHHHHHHHhccCccEEEEC-CHHHHHHHHhcCCCCcEEEEeCCCCCCCcHHHHHHHHHhCcccCCC
Confidence 46789999998865443 34 577776432 33556666666 789988776653 4566788889999 88889
Q ss_pred cEEEEecC--hhhHHHHHHCCCCeEEcC
Q 003861 634 PIYARAQD--MMHLLDLKKAGATDAILE 659 (791)
Q Consensus 634 ~iiara~~--~~~~~~L~~~Gad~Vi~p 659 (791)
++++-..+ .+......++|++..+.-
T Consensus 83 ~ii~ls~~~~~~~~~~~~~~g~~~~l~K 110 (140)
T 3lua_A 83 PVIIATKSDNPGYRHAALKFKVSDYILK 110 (140)
T ss_dssp CEEEEESCCCHHHHHHHHHSCCSEEEES
T ss_pred CEEEEeCCCCHHHHHHHHHcCCCEEEEC
Confidence 98776654 456667789999987654
No 297
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=91.41 E-value=0.26 Score=50.70 Aligned_cols=72 Identities=18% Similarity=0.097 Sum_probs=54.5
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. +.+|+.+++.|. ++|++|+++|.+++..+++.+ . ....+.+|.+|++.++++
T Consensus 12 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 81 (264)
T 3ucx_A 12 KVVVISGVGPALGTTLARRCA----------EQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDE 81 (264)
T ss_dssp CEEEEESCCTTHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred cEEEEECCCcHHHHHHHHHHH----------HCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 35777776 569999999998 899999999999987665432 2 456788999999877653
Q ss_pred ---CCCCCcEEEEEe
Q 003861 602 ---GITSPKAVMIMY 613 (791)
Q Consensus 602 ---gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 82 ~~~~~g~id~lv~nA 96 (264)
T 3ucx_A 82 TMKAYGRVDVVINNA 96 (264)
T ss_dssp HHHHTSCCSEEEECC
T ss_pred HHHHcCCCcEEEECC
Confidence 124678777654
No 298
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=91.40 E-value=1.3 Score=40.53 Aligned_cols=97 Identities=14% Similarity=0.112 Sum_probs=66.3
Q ss_pred CCCCcEEEEcCChhhHHHHH----hcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC-HHHHHHHHHHHHHhCCCCcEE
Q 003861 562 TVGWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIY 636 (791)
Q Consensus 562 ~~g~~vvvID~d~~~v~~~~----~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~-d~~n~~~~~~ar~l~p~~~ii 636 (791)
..+.+|.+||.|+...+.++ +.|+.+... .+-.+.++.+.-...|.+++-..- +......+..+|+.+|+++++
T Consensus 5 ~~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (154)
T 2rjn_A 5 YKNYTVMLVDDEQPILNSLKRLIKRLGCNIITF-TSPLDALEALKGTSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERV 83 (154)
T ss_dssp CSCCEEEEECSCHHHHHHHHHHHHTTTCEEEEE-SCHHHHHHHHTTSCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEE
T ss_pred CCCCeEEEEcCCHHHHHHHHHHHHHcCCeEEEe-CCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEE
Confidence 45678999999987755443 467766643 234567777766778988887653 245567888999999999988
Q ss_pred EEecChh--hHHHHHHCC-CCeEEcC
Q 003861 637 ARAQDMM--HLLDLKKAG-ATDAILE 659 (791)
Q Consensus 637 ara~~~~--~~~~L~~~G-ad~Vi~p 659 (791)
+-....+ ......+.| ++..+.-
T Consensus 84 ~ls~~~~~~~~~~~~~~g~~~~~l~k 109 (154)
T 2rjn_A 84 VISGYADAQATIDAVNRGKISRFLLK 109 (154)
T ss_dssp EEECGGGHHHHHHHHHTTCCSEEEES
T ss_pred EEecCCCHHHHHHHHhccchheeeeC
Confidence 7766544 444555676 8776554
No 299
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=91.40 E-value=0.31 Score=50.61 Aligned_cols=72 Identities=13% Similarity=0.190 Sum_probs=54.8
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhc------
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~a------ 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+++.+ .....+.+|.+|++..+++
T Consensus 30 k~vlVTGas~gIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 99 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLA----------DEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVA 99 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHH
Confidence 34667775 679999999998 889999999999988776643 3577889999999876653
Q ss_pred CCCCCcEEEEEe
Q 003861 602 GITSPKAVMIMY 613 (791)
Q Consensus 602 gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 100 ~~g~iD~lvnnA 111 (277)
T 3gvc_A 100 AFGGVDKLVANA 111 (277)
T ss_dssp HHSSCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 123567776554
No 300
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=91.39 E-value=0.59 Score=50.46 Aligned_cols=108 Identities=16% Similarity=0.164 Sum_probs=69.9
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCC-CEEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGF-PILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~-~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
-++.|+|+|.+|+..++.|.+ ...+.+++ +.|.|+++.+.+.+ .+. ...+.| -++.+++ .+.|+
T Consensus 24 ~rvgiIG~G~~g~~~~~~l~~--------~~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~--~~~ll~~---~~~D~ 90 (357)
T 3ec7_A 24 LKAGIVGIGMIGSDHLRRLAN--------TVSGVEVVAVCDIVAGRAQAALDKYAIEAKDYND--YHDLIND---KDVEV 90 (357)
T ss_dssp EEEEEECCSHHHHHHHHHHHH--------TCTTEEEEEEECSSTTHHHHHHHHHTCCCEEESS--HHHHHHC---TTCCE
T ss_pred eeEEEECCcHHHHHHHHHHHh--------hCCCcEEEEEEeCCHHHHHHHHHHhCCCCeeeCC--HHHHhcC---CCCCE
Confidence 479999999999999998861 03567766 68999999887654 453 233332 2334442 46899
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCe
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATD 655 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~ 655 (791)
|+++++++. -...+..+-+.+ .+|++. +.+.+..+.+ ++.|...
T Consensus 91 V~i~tp~~~-h~~~~~~al~aG--k~Vl~EKPla~~~~e~~~l~~~a~~~g~~~ 141 (357)
T 3ec7_A 91 VIITASNEA-HADVAVAALNAN--KYVFCEKPLAVTAADCQRVIEAEQKNGKRM 141 (357)
T ss_dssp EEECSCGGG-HHHHHHHHHHTT--CEEEEESSSCSSHHHHHHHHHHHHHHTSCC
T ss_pred EEEcCCcHH-HHHHHHHHHHCC--CCEEeecCccCCHHHHHHHHHHHHHhCCeE
Confidence 999998754 344555555554 467774 4455554444 4556644
No 301
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=91.39 E-value=0.3 Score=50.00 Aligned_cols=73 Identities=14% Similarity=0.071 Sum_probs=55.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc------CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL------GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~------~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..+++.+. ...++.+|.+|++.++++=
T Consensus 7 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 76 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFA----------KEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQ 76 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 35777776 679999999998 8999999999999987665432 3567889999998776531
Q ss_pred ----CCCCcEEEEEeC
Q 003861 603 ----ITSPKAVMIMYT 614 (791)
Q Consensus 603 ----i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 77 ~~~~~g~id~lv~nAg 92 (257)
T 3imf_A 77 IDEKFGRIDILINNAA 92 (257)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 136787776554
No 302
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.38 E-value=0.11 Score=56.53 Aligned_cols=74 Identities=19% Similarity=0.103 Sum_probs=52.9
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
++++|+|.|..|+.+++.+. ..|.+|+++|.++++.+.+++.+...+..+..+.+.+.+ -+.++|.+|-
T Consensus 168 ~~VlViGaGgvG~~aa~~a~----------~~Ga~V~v~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~DvVI~ 236 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMAV----------GLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIET-AVAEADLLIG 236 (361)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHH-HHHTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCEEEEEeCCHHHHHHHHHhhCceeEeeeCCHHHHHH-HHcCCCEEEE
Confidence 68999999999999999998 789999999999999888876432211111123333322 1247998888
Q ss_pred EeCCH
Q 003861 612 MYTDK 616 (791)
Q Consensus 612 ~~~~d 616 (791)
+++.+
T Consensus 237 ~~~~~ 241 (361)
T 1pjc_A 237 AVLVP 241 (361)
T ss_dssp CCCCT
T ss_pred CCCcC
Confidence 87653
No 303
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=91.38 E-value=1 Score=39.10 Aligned_cols=95 Identities=17% Similarity=0.120 Sum_probs=62.7
Q ss_pred CcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCCH-HHHHHHHHHHHHhCCCCcEEEEe
Q 003861 565 WPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLAFPAIPIYARA 639 (791)
Q Consensus 565 ~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~d-~~n~~~~~~ar~l~p~~~iiara 639 (791)
.++.++|.|+...+.+ ++.|+.++.--.+-.+.++...-.+.|.+++-..-+ ..-...+..+|+.+|++++++-.
T Consensus 3 ~~ilivdd~~~~~~~l~~~l~~~g~~vv~~~~~~~~a~~~~~~~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s 82 (120)
T 1tmy_A 3 KRVLIVDDAAFMRMMLKDIITKAGYEVAGEATNGREAVEKYKELKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCS 82 (120)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhhcCcEEEEEECCHHHHHHHHHhcCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEe
Confidence 4688889888764443 346776543223335566555445688887776543 34567788889888988877766
Q ss_pred cC--hhhHHHHHHCCCCeEEcC
Q 003861 640 QD--MMHLLDLKKAGATDAILE 659 (791)
Q Consensus 640 ~~--~~~~~~L~~~Gad~Vi~p 659 (791)
.. .+......+.|++..+.-
T Consensus 83 ~~~~~~~~~~~~~~g~~~~l~K 104 (120)
T 1tmy_A 83 AMGQQAMVIEAIKAGAKDFIVK 104 (120)
T ss_dssp CTTCHHHHHHHHHTTCCEEEES
T ss_pred CCCCHHHHHHHHHhCcceeEeC
Confidence 54 444566778999987654
No 304
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=91.38 E-value=0.26 Score=50.10 Aligned_cols=72 Identities=13% Similarity=0.059 Sum_probs=54.0
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+++.+ . ....+.+|.+|++.++++=
T Consensus 8 k~~lVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~ 77 (247)
T 2jah_A 8 KVALITGASSGIGEATARALA----------AEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVAS 77 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 45777775 789999999998 889999999999887665432 2 3567889999998776531
Q ss_pred ----CCCCcEEEEEe
Q 003861 603 ----ITSPKAVMIMY 613 (791)
Q Consensus 603 ----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 78 ~~~~~g~id~lv~nA 92 (247)
T 2jah_A 78 TVEALGGLDILVNNA 92 (247)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 23678776644
No 305
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=91.38 E-value=0.11 Score=56.16 Aligned_cols=71 Identities=15% Similarity=0.308 Sum_probs=57.9
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCC-CCcEEEEcCChhhHHHHHh-cCCCEEEccCC-CHHHHHhcCCCCCc
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTV-GWPFVAFDLNPSVVKESRK-LGFPILYGDAS-RPAVLLSAGITSPK 607 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~-g~~vvvID~d~~~v~~~~~-~~~~~v~GD~t-~~~~L~~agi~~a~ 607 (791)
.+++|.| .|-+|+.+++.|. +. |++|++++.+++..+.+.+ .++.++.||.+ |++.++++ ++++|
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~----------~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~-~~~~d 93 (372)
T 3slg_A 25 KKVLILGVNGFIGHHLSKRIL----------ETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYH-VKKCD 93 (372)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHH-HHHCS
T ss_pred CEEEEECCCChHHHHHHHHHH----------hCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHH-hccCC
Confidence 4799999 5999999999998 66 9999999999887665543 67899999999 99888764 23788
Q ss_pred EEEEEe
Q 003861 608 AVMIMY 613 (791)
Q Consensus 608 ~viv~~ 613 (791)
+||-+.
T Consensus 94 ~Vih~A 99 (372)
T 3slg_A 94 VILPLV 99 (372)
T ss_dssp EEEECB
T ss_pred EEEEcC
Confidence 887543
No 306
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=91.37 E-value=0.25 Score=50.81 Aligned_cols=72 Identities=17% Similarity=0.116 Sum_probs=53.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh--------cCCCEEEccCCCHHHHHhc-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK--------LGFPILYGDASRPAVLLSA- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~--------~~~~~v~GD~t~~~~L~~a- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..++..+ .....+.+|.+|++.++++
T Consensus 14 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~ 83 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLA----------AEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYV 83 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHH
Confidence 45677765 788999999998 789999999999987655432 2356778999999877654
Q ss_pred -----CCCCCcEEEEEe
Q 003861 602 -----GITSPKAVMIMY 613 (791)
Q Consensus 602 -----gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 84 ~~~~~~~g~id~lv~nA 100 (267)
T 1iy8_A 84 TATTERFGRIDGFFNNA 100 (267)
T ss_dssp HHHHHHHSCCSEEEECC
T ss_pred HHHHHHcCCCCEEEECC
Confidence 123567776554
No 307
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=91.35 E-value=0.3 Score=50.65 Aligned_cols=72 Identities=10% Similarity=0.075 Sum_probs=54.5
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..+++.+ . ....+.+|.+|++.++++=
T Consensus 33 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~ 102 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYA----------EAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQ 102 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHH
Confidence 35677776 679999999998 889999999999887655432 2 4678899999998776541
Q ss_pred ----CCCCcEEEEEe
Q 003861 603 ----ITSPKAVMIMY 613 (791)
Q Consensus 603 ----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 103 ~~~~~g~iD~lvnnA 117 (276)
T 3r1i_A 103 MTGELGGIDIAVCNA 117 (276)
T ss_dssp HHHHHSCCSEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 13678776654
No 308
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=91.35 E-value=0.062 Score=57.83 Aligned_cols=62 Identities=15% Similarity=0.255 Sum_probs=45.9
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++.|+|+|++|+.+++.|. ..|.+|++.|.+++..+ +... .++.+.+ ++++|.|++
T Consensus 165 ~~vgIIG~G~iG~~vA~~l~----------~~G~~V~~~dr~~~~~~-----g~~~----~~~l~el----l~~aDvVil 221 (333)
T 3ba1_A 165 KRVGIIGLGRIGLAVAERAE----------AFDCPISYFSRSKKPNT-----NYTY----YGSVVEL----ASNSDILVV 221 (333)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------TTTCCEEEECSSCCTTC-----CSEE----ESCHHHH----HHTCSEEEE
T ss_pred CEEEEECCCHHHHHHHHHHH----------HCCCEEEEECCCchhcc-----Ccee----cCCHHHH----HhcCCEEEE
Confidence 46999999999999999998 88999999999887532 3221 1232222 247898988
Q ss_pred EeCCH
Q 003861 612 MYTDK 616 (791)
Q Consensus 612 ~~~~d 616 (791)
+++..
T Consensus 222 ~vP~~ 226 (333)
T 3ba1_A 222 ACPLT 226 (333)
T ss_dssp CSCCC
T ss_pred ecCCC
Confidence 88764
No 309
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=91.34 E-value=0.07 Score=57.45 Aligned_cols=80 Identities=14% Similarity=0.184 Sum_probs=52.7
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+.+.|+|+|++|+.+|+.|+ ..|.+|++.|.+++.... +.+... .| -++.+ +++|.|++
T Consensus 142 ~tvgIiG~G~IG~~vA~~l~----------~~G~~V~~~d~~~~~~~~--~~g~~~--~~--l~ell-----~~aDvV~l 200 (334)
T 2pi1_A 142 LTLGVIGTGRIGSRVAMYGL----------AFGMKVLCYDVVKREDLK--EKGCVY--TS--LDELL-----KESDVISL 200 (334)
T ss_dssp SEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCCHHHH--HTTCEE--CC--HHHHH-----HHCSEEEE
T ss_pred ceEEEECcCHHHHHHHHHHH----------HCcCEEEEECCCcchhhH--hcCcee--cC--HHHHH-----hhCCEEEE
Confidence 46999999999999999998 889999999998876532 334332 22 22333 46787877
Q ss_pred EeCCHH--HHHHHHHHHHHhCCC
Q 003861 612 MYTDKK--RTIEAVQRLRLAFPA 632 (791)
Q Consensus 612 ~~~~d~--~n~~~~~~ar~l~p~ 632 (791)
+.+..+ .++.-....+.+.|+
T Consensus 201 ~~P~t~~t~~li~~~~l~~mk~g 223 (334)
T 2pi1_A 201 HVPYTKETHHMINEERISLMKDG 223 (334)
T ss_dssp CCCCCTTTTTCBCHHHHHHSCTT
T ss_pred eCCCChHHHHhhCHHHHhhCCCC
Confidence 776432 222223445555555
No 310
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=91.34 E-value=0.33 Score=48.75 Aligned_cols=72 Identities=14% Similarity=0.151 Sum_probs=53.5
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEE-cCChhhHHHHH----hcC--CCE-EEccCCCHHHHHhc--
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAF-DLNPSVVKESR----KLG--FPI-LYGDASRPAVLLSA-- 601 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvI-D~d~~~v~~~~----~~~--~~~-v~GD~t~~~~L~~a-- 601 (791)
+++|.|. |.+|+.+++.|. ++|++|+++ +.+++..+++. +.+ ... +.+|.+|++.++++
T Consensus 3 ~vlITGasggiG~~~a~~l~----------~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 72 (245)
T 2ph3_A 3 KALITGASRGIGRAIALRLA----------EDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVH 72 (245)
T ss_dssp EEEETTTTSHHHHHHHHHHH----------TTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHH
T ss_pred EEEEeCCCchHHHHHHHHHH----------HCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHH
Confidence 5777776 789999999998 899999998 88887765543 223 345 88999999988765
Q ss_pred ----CCCCCcEEEEEeC
Q 003861 602 ----GITSPKAVMIMYT 614 (791)
Q Consensus 602 ----gi~~a~~viv~~~ 614 (791)
..++.|.+|-..+
T Consensus 73 ~~~~~~~~~d~li~~Ag 89 (245)
T 2ph3_A 73 QAAEVLGGLDTLVNNAG 89 (245)
T ss_dssp HHHHHHTCCCEEEECCC
T ss_pred HHHHhcCCCCEEEECCC
Confidence 1246787776543
No 311
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=91.31 E-value=0.13 Score=53.48 Aligned_cols=71 Identities=13% Similarity=0.053 Sum_probs=52.0
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-CC--CEEEccCCCHHHHHhcCCCCCc
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GF--PILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-~~--~~v~GD~t~~~~L~~agi~~a~ 607 (791)
.++++|+|.|.+|+.+++.|. +.|.+|++++.++++.+.+.+. +. .+.. .+.+.+.+ +++|
T Consensus 119 ~k~vlViGaGg~g~a~a~~L~----------~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~---~~~~~~~~---~~~D 182 (271)
T 1nyt_A 119 GLRILLIGAGGASRGVLLPLL----------SLDCAVTITNRTVSRAEELAKLFAHTGSIQA---LSMDELEG---HEFD 182 (271)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSHHHHHHHHHHTGGGSSEEE---CCSGGGTT---CCCS
T ss_pred CCEEEEECCcHHHHHHHHHHH----------HcCCEEEEEECCHHHHHHHHHHhhccCCeeE---ecHHHhcc---CCCC
Confidence 347999999999999999998 7889999999999987766532 11 2222 23233332 6899
Q ss_pred EEEEEeCCHH
Q 003861 608 AVMIMYTDKK 617 (791)
Q Consensus 608 ~viv~~~~d~ 617 (791)
.+|.+++...
T Consensus 183 ivVn~t~~~~ 192 (271)
T 1nyt_A 183 LIINATSSGI 192 (271)
T ss_dssp EEEECCSCGG
T ss_pred EEEECCCCCC
Confidence 9998887643
No 312
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=91.30 E-value=1.4 Score=47.28 Aligned_cols=136 Identities=20% Similarity=0.209 Sum_probs=82.8
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCC--CcEEEEcCChhhHHH----HHhcCC---CEEEccCCCHHHHHh
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSVVKE----SRKLGF---PILYGDASRPAVLLS 600 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g--~~vvvID~d~~~v~~----~~~~~~---~~v~GD~t~~~~L~~ 600 (791)
..+|.|+|. |.+|+.++..+. ..| .+++++|.|+++++- +.+..+ .+.. .+|. .
T Consensus 8 ~~KV~ViGaaG~VG~~~a~~l~----------~~g~~~evvLiDi~~~k~~g~a~DL~~~~~~~~~i~~--t~d~---~- 71 (343)
T 3fi9_A 8 EEKLTIVGAAGMIGSNMAQTAA----------MMRLTPNLCLYDPFAVGLEGVAEEIRHCGFEGLNLTF--TSDI---K- 71 (343)
T ss_dssp SSEEEEETTTSHHHHHHHHHHH----------HTTCCSCEEEECSCHHHHHHHHHHHHHHCCTTCCCEE--ESCH---H-
T ss_pred CCEEEEECCCChHHHHHHHHHH----------hcCCCCEEEEEeCCchhHHHHHHhhhhCcCCCCceEE--cCCH---H-
Confidence 457999997 999999998876 455 489999999987553 333222 1111 1222 1
Q ss_pred cCCCCCcEEEEEeCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhHHH---HHHCCC--CeEEcCc
Q 003861 601 AGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHLLD---LKKAGA--TDAILEN 660 (791)
Q Consensus 601 agi~~a~~viv~~~~---------d--~~n~~----~~~~ar~l~p~~~iiara~~~~~~~~---L~~~Ga--d~Vi~p~ 660 (791)
..+++||.||++.+. | ..|.. ++..+++..|+..++..+.|+.+.-- ++..|- ++|+.-.
T Consensus 72 ~al~dADvVvitaG~p~kpG~~R~dLl~~N~~I~~~i~~~i~~~~p~a~~vlvvsNPvd~~t~i~~k~sg~p~~rv~g~t 151 (343)
T 3fi9_A 72 EALTDAKYIVSSGGAPRKEGMTREDLLKGNAEIAAQLGKDIKSYCPDCKHVIIIFNPADITGLVTLIYSGLKPSQVTTLA 151 (343)
T ss_dssp HHHTTEEEEEECCC-------CHHHHHHHHHHHHHHHHHHHHHHCTTCCEEEECSSSHHHHHHHHHHHHTCCGGGEEEEC
T ss_pred HHhCCCCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhccCcEEEEEecCchHHHHHHHHHHcCCCcceEEEec
Confidence 124689988887542 2 34544 34566777888753445566654322 244453 4566544
Q ss_pred HHHHHHHHHHHHhhcCCChHHH
Q 003861 661 AETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 661 ~~~~~~la~~~l~~l~~~~~~~ 682 (791)
.+-..|+-..+-+.+|+++..+
T Consensus 152 ~LDs~R~~~~la~~l~v~~~~v 173 (343)
T 3fi9_A 152 GLDSTRLQSELAKHFGIKQSLV 173 (343)
T ss_dssp CHHHHHHHHHHHHHHTSCGGGE
T ss_pred CcHHHHHHHHHHHHhCcCHHHc
Confidence 4444566666666778887655
No 313
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=91.30 E-value=0.22 Score=50.55 Aligned_cols=72 Identities=19% Similarity=0.167 Sum_probs=54.9
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+++.+ . ...++.+|.+|++.++++=
T Consensus 10 k~vlITGas~giG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALA----------REGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADR 79 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 45777776 678999999998 889999999999988666543 2 3567889999998776541
Q ss_pred ----CCCCcEEEEEe
Q 003861 603 ----ITSPKAVMIMY 613 (791)
Q Consensus 603 ----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 80 ~~~~~g~id~li~~A 94 (253)
T 3qiv_A 80 TLAEFGGIDYLVNNA 94 (253)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 13678777664
No 314
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=91.29 E-value=0.26 Score=50.52 Aligned_cols=72 Identities=11% Similarity=0.078 Sum_probs=54.0
Q ss_pred CCEEEeCC---ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh---hHHHHHh--cCCCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGF---GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS---VVKESRK--LGFPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~---G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~---~v~~~~~--~~~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++ ..+++.+ ....++.+|.+|++.++++=
T Consensus 9 k~vlVTGas~~~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~ 78 (261)
T 2wyu_A 9 KKALVMGVTNQRSLGFAIAAKLK----------EAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFA 78 (261)
T ss_dssp CEEEEESCCSSSSHHHHHHHHHH----------HHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHH
Confidence 46888897 589999999998 78999999999886 4444443 23678899999998776541
Q ss_pred -----CCCCcEEEEEe
Q 003861 603 -----ITSPKAVMIMY 613 (791)
Q Consensus 603 -----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 79 ~~~~~~g~iD~lv~~A 94 (261)
T 2wyu_A 79 GVKEAFGGLDYLVHAI 94 (261)
T ss_dssp HHHHHHSSEEEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 12567776654
No 315
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=91.29 E-value=0.21 Score=51.78 Aligned_cols=72 Identities=14% Similarity=0.116 Sum_probs=53.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c-----CCCEEEccCCCHHHHHhc
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L-----GFPILYGDASRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~-----~~~~v~GD~t~~~~L~~a 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..++..+ . ...++.+|.+|++.++++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 76 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFA----------QEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQI 76 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHH
Confidence 35777765 689999999998 889999999999987665432 1 356788999999876653
Q ss_pred ------CCCCCcEEEEEe
Q 003861 602 ------GITSPKAVMIMY 613 (791)
Q Consensus 602 ------gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 77 ~~~~~~~~g~iD~lv~nA 94 (280)
T 1xkq_A 77 INSTLKQFGKIDVLVNNA 94 (280)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHhcCCCCEEEECC
Confidence 123577776554
No 316
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=91.27 E-value=0.39 Score=49.83 Aligned_cols=73 Identities=11% Similarity=0.122 Sum_probs=54.5
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hcC--CCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KLG--FPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~~--~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. |.+|+.+++.|. +.|++|++++.+++..+++. +.+ ..++.+|.+|++.++++
T Consensus 45 k~vlITGasggIG~~la~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~ 114 (285)
T 2c07_A 45 KVALVTGAGRGIGREIAKMLA----------KSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINK 114 (285)
T ss_dssp CEEEEESTTSHHHHHHHHHHT----------TTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHH
Confidence 45777765 789999999998 88999999998887765443 223 45778999999988764
Q ss_pred ---CCCCCcEEEEEeC
Q 003861 602 ---GITSPKAVMIMYT 614 (791)
Q Consensus 602 ---gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 115 ~~~~~~~id~li~~Ag 130 (285)
T 2c07_A 115 ILTEHKNVDILVNNAG 130 (285)
T ss_dssp HHHHCSCCCEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 2246787776553
No 317
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=91.27 E-value=0.089 Score=54.23 Aligned_cols=67 Identities=15% Similarity=0.191 Sum_probs=54.6
Q ss_pred CEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++|.| .|.+|+.+++.|. ++|++|++.|.+++..+ ..+..++.+|.+|++.++++ +++.|.+|-
T Consensus 5 ~vlVTGasg~IG~~la~~L~----------~~G~~V~~~~r~~~~~~---~~~~~~~~~Dl~d~~~~~~~-~~~~D~vi~ 70 (267)
T 3rft_A 5 RLLVTGAAGQLGRVMRERLA----------PMAEILRLADLSPLDPA---GPNEECVQCDLADANAVNAM-VAGCDGIVH 70 (267)
T ss_dssp EEEEESTTSHHHHHHHHHTG----------GGEEEEEEEESSCCCCC---CTTEEEEECCTTCHHHHHHH-HTTCSEEEE
T ss_pred EEEEECCCCHHHHHHHHHHH----------hcCCEEEEEecCCcccc---CCCCEEEEcCCCCHHHHHHH-HcCCCEEEE
Confidence 578888 5899999999998 88999999999886543 34678899999999988875 347888876
Q ss_pred Ee
Q 003861 612 MY 613 (791)
Q Consensus 612 ~~ 613 (791)
..
T Consensus 71 ~A 72 (267)
T 3rft_A 71 LG 72 (267)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 318
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=91.25 E-value=0.33 Score=54.22 Aligned_cols=42 Identities=21% Similarity=0.339 Sum_probs=38.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK 582 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~ 582 (791)
+-++.|+|.|.+|..+|..|. +.|++|+++|.|+++++.+.+
T Consensus 8 ~~~~~vIGlG~vG~~~A~~La----------~~G~~V~~~D~~~~kv~~l~~ 49 (446)
T 4a7p_A 8 SVRIAMIGTGYVGLVSGACFS----------DFGHEVVCVDKDARKIELLHQ 49 (446)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCSTTHHHHTT
T ss_pred ceEEEEEcCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHhc
Confidence 446899999999999999998 889999999999999999876
No 319
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=91.25 E-value=1.3 Score=40.59 Aligned_cols=96 Identities=15% Similarity=0.074 Sum_probs=67.0
Q ss_pred CCcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCCH-HHHHHHHHHHHHhCCCCcEEEE
Q 003861 564 GWPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLAFPAIPIYAR 638 (791)
Q Consensus 564 g~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~d-~~n~~~~~~ar~l~p~~~iiar 638 (791)
+..+.++|.|+...+.+ ++.|+.+... .+-.+.++.+.-...|.+++...-+ ......+..+|+.+|++++++-
T Consensus 3 ~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dliild~~l~~~~g~~~~~~l~~~~~~~pii~l 81 (155)
T 1qkk_A 3 APSVFLIDDDRDLRKAMQQTLELAGFTVSSF-ASATEALAGLSADFAGIVISDIRMPGMDGLALFRKILALDPDLPMILV 81 (155)
T ss_dssp -CEEEEECSCHHHHHHHHHHHHHTTCEEEEE-SCHHHHHHTCCTTCCSEEEEESCCSSSCHHHHHHHHHHHCTTSCEEEE
T ss_pred CCEEEEEeCCHHHHHHHHHHHHHcCcEEEEE-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCCEEEE
Confidence 45689999998765443 4567776643 3345677777767889888876543 3556778888999999998877
Q ss_pred ecCh--hhHHHHHHCCCCeEEcCc
Q 003861 639 AQDM--MHLLDLKKAGATDAILEN 660 (791)
Q Consensus 639 a~~~--~~~~~L~~~Gad~Vi~p~ 660 (791)
.... +......+.|++.++.-.
T Consensus 82 s~~~~~~~~~~~~~~g~~~~l~kP 105 (155)
T 1qkk_A 82 TGHGDIPMAVQAIQDGAYDFIAKP 105 (155)
T ss_dssp ECGGGHHHHHHHHHTTCCEEEESS
T ss_pred ECCCChHHHHHHHhcCCCeEEeCC
Confidence 6543 455667789999877643
No 320
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=91.25 E-value=0.08 Score=58.50 Aligned_cols=98 Identities=16% Similarity=0.182 Sum_probs=63.5
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCC-------------CHH-
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDAS-------------RPA- 596 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t-------------~~~- 596 (791)
..+++|+|.|.+|+.+++.+. ..|.+|+++|.++++.+.+++.|...+.-|.. +++
T Consensus 172 g~~V~ViGaG~iG~~aa~~a~----------~~Ga~V~v~D~~~~~~~~~~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~ 241 (401)
T 1x13_A 172 PAKVMVIGAGVAGLAAIGAAN----------SLGAIVRAFDTRPEVKEQVQSMGAEFLELDFKEEAGSGDGYAKVMSDAF 241 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSCGGGHHHHHHTTCEECCC--------CCHHHHHHSHHH
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHcCCEEEEecccccccccccchhhccHHH
Confidence 458999999999999999998 78999999999999988887777655432221 111
Q ss_pred ------HHHhcCCCCCcEEEEEe--CC-HHHHHHHHHHHHHhCCCCcEEEEe
Q 003861 597 ------VLLSAGITSPKAVMIMY--TD-KKRTIEAVQRLRLAFPAIPIYARA 639 (791)
Q Consensus 597 ------~L~~agi~~a~~viv~~--~~-d~~n~~~~~~ar~l~p~~~iiara 639 (791)
.++++ +..+|.+|.++ +. +...+.....++.+.|+..++--+
T Consensus 242 ~~~~~~~l~e~-~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva 292 (401)
T 1x13_A 242 IKAEMELFAAQ-AKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLA 292 (401)
T ss_dssp HHHHHHHHHHH-HHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETT
T ss_pred HHHHHHHHHHH-hCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEc
Confidence 23221 24689888773 21 111222234456666665555544
No 321
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=91.21 E-value=0.29 Score=49.91 Aligned_cols=74 Identities=15% Similarity=0.090 Sum_probs=55.3
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---------cCCCEEEccCCCHHHHHh
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---------LGFPILYGDASRPAVLLS 600 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---------~~~~~v~GD~t~~~~L~~ 600 (791)
.+.++|.|. |-+|+.+++.|. ++|++|++++.+++..++..+ ....++.+|.+|++..++
T Consensus 7 ~k~~lVTGas~GIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 76 (250)
T 3nyw_A 7 KGLAIITGASQGIGAVIAAGLA----------TDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADT 76 (250)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH----------HHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHH
Confidence 345777776 789999999998 889999999999988666542 345688899999887665
Q ss_pred c------CCCCCcEEEEEeC
Q 003861 601 A------GITSPKAVMIMYT 614 (791)
Q Consensus 601 a------gi~~a~~viv~~~ 614 (791)
+ ...+.|.+|-..+
T Consensus 77 ~~~~~~~~~g~iD~lvnnAg 96 (250)
T 3nyw_A 77 EIKDIHQKYGAVDILVNAAA 96 (250)
T ss_dssp HHHHHHHHHCCEEEEEECCC
T ss_pred HHHHHHHhcCCCCEEEECCC
Confidence 3 1136677765543
No 322
>3hdg_A Uncharacterized protein; two-component sensor activity, response regulator, PSI-II, 11227F, NYSGXRC, structural genomics; 2.27A {Wolinella succinogenes} SCOP: c.23.1.0
Probab=91.20 E-value=0.36 Score=43.32 Aligned_cols=98 Identities=7% Similarity=-0.023 Sum_probs=63.5
Q ss_pred CCCCcEEEEcCChhhHHHHH----hcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC-HHHHHHHHHHHHHhCCCCcEE
Q 003861 562 TVGWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIY 636 (791)
Q Consensus 562 ~~g~~vvvID~d~~~v~~~~----~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~-d~~n~~~~~~ar~l~p~~~ii 636 (791)
+...+++++|.|+...+.++ +.++.+...+ +-.+.++.+.-...|.+++-..- +......+..+|+.+|+++++
T Consensus 5 ~~~~~ilivdd~~~~~~~l~~~L~~~~~~v~~~~-~~~~a~~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii 83 (137)
T 3hdg_A 5 EVALKILIVEDDTDAREWLSTIISNHFPEVWSAG-DGEEGERLFGLHAPDVIITDIRMPKLGGLEMLDRIKAGGAKPYVI 83 (137)
T ss_dssp --CCCEEEECSCHHHHHHHHHHHHTTCSCEEEES-SHHHHHHHHHHHCCSEEEECSSCSSSCHHHHHHHHHHTTCCCEEE
T ss_pred ccccEEEEEeCCHHHHHHHHHHHHhcCcEEEEEC-CHHHHHHHHhccCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCcEE
Confidence 34567888888887654433 3444444332 33445555544578888776653 345677888999999998888
Q ss_pred EEecCh--hhHHHHHHCCCCeEEcCc
Q 003861 637 ARAQDM--MHLLDLKKAGATDAILEN 660 (791)
Q Consensus 637 ara~~~--~~~~~L~~~Gad~Vi~p~ 660 (791)
+-..+. +......++|++.++.-.
T Consensus 84 ~~s~~~~~~~~~~~~~~g~~~~l~kP 109 (137)
T 3hdg_A 84 VISAFSEMKYFIKAIELGVHLFLPKP 109 (137)
T ss_dssp ECCCCCCHHHHHHHHHHCCSEECCSS
T ss_pred EEecCcChHHHHHHHhCCcceeEcCC
Confidence 766544 466677899999876543
No 323
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=91.18 E-value=0.22 Score=50.89 Aligned_cols=72 Identities=19% Similarity=0.057 Sum_probs=54.5
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhcC-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~ag----- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++..+ ....++.+|.+|++.++++=
T Consensus 13 k~vlVTGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 82 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLV----------GQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKG 82 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 35777766 788999999998 889999999999887665543 24677889999998776541
Q ss_pred -CCCCcEEEEEe
Q 003861 603 -ITSPKAVMIMY 613 (791)
Q Consensus 603 -i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 83 ~~g~id~li~~A 94 (265)
T 2o23_A 83 KFGRVDVAVNCA 94 (265)
T ss_dssp HHSCCCEEEECC
T ss_pred HCCCCCEEEECC
Confidence 12678777554
No 324
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=91.17 E-value=0.26 Score=50.53 Aligned_cols=73 Identities=15% Similarity=0.019 Sum_probs=55.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhcC-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~ag----- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++..+ ....++.+|.+|++.++++=
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 77 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMV----------AEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVT 77 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHH
Confidence 45777775 688999999998 789999999999988766543 23567899999998876541
Q ss_pred -CCCCcEEEEEeC
Q 003861 603 -ITSPKAVMIMYT 614 (791)
Q Consensus 603 -i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 78 ~~g~iD~lv~~Ag 90 (260)
T 1nff_A 78 AFGGLHVLVNNAG 90 (260)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 126787776543
No 325
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=91.17 E-value=0.26 Score=51.08 Aligned_cols=73 Identities=15% Similarity=0.083 Sum_probs=53.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hc-----CCCEEEccCCCHHHHHhc
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KL-----GFPILYGDASRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~-----~~~~v~GD~t~~~~L~~a 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..+... +. ...++.+|.+|++..+++
T Consensus 12 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~ 81 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLV----------AAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARA 81 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHH
Confidence 35677775 688999999998 89999999999998765543 22 356788999999876653
Q ss_pred C------CCCCcEEEEEeC
Q 003861 602 G------ITSPKAVMIMYT 614 (791)
Q Consensus 602 g------i~~a~~viv~~~ 614 (791)
= ..+.|.+|-..+
T Consensus 82 ~~~~~~~~g~id~lv~nAg 100 (281)
T 3svt_A 82 VDAVTAWHGRLHGVVHCAG 100 (281)
T ss_dssp HHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHcCCCCEEEECCC
Confidence 1 135677765543
No 326
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=91.17 E-value=0.27 Score=50.58 Aligned_cols=72 Identities=17% Similarity=0.248 Sum_probs=55.0
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc---CCCEEEccCCCHHHHHhc------
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSA------ 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~---~~~~v~GD~t~~~~L~~a------ 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++..+. ....+.+|.+|++.++++
T Consensus 7 k~vlITGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 76 (263)
T 2a4k_A 7 KTILVTGAASGIGRAALDLFA----------REGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALE 76 (263)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45777776 789999999998 8899999999999887766542 456788999999877653
Q ss_pred CCCCCcEEEEEe
Q 003861 602 GITSPKAVMIMY 613 (791)
Q Consensus 602 gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 77 ~~g~iD~lvnnA 88 (263)
T 2a4k_A 77 EFGRLHGVAHFA 88 (263)
T ss_dssp HHSCCCEEEEGG
T ss_pred HcCCCcEEEECC
Confidence 123567776544
No 327
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=91.16 E-value=1.2 Score=47.57 Aligned_cols=137 Identities=13% Similarity=0.122 Sum_probs=84.7
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC--cEEEEcCChhhHHH----HHhc----CCCEEEccCCCHHHHH
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW--PFVAFDLNPSVVKE----SRKL----GFPILYGDASRPAVLL 599 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~--~vvvID~d~~~v~~----~~~~----~~~~v~GD~t~~~~L~ 599 (791)
...++.|+|.|.+|..++..|. ..|. +++++|.++++++- +.+. ....+.+ .+|.+
T Consensus 18 ~~~kV~ViGaG~vG~~~a~~l~----------~~~~~~el~L~Di~~~~~~g~a~DL~~~~~~~~~~~i~~-~~d~~--- 83 (331)
T 4aj2_A 18 PQNKITVVGVGAVGMACAISIL----------MKDLADELALVDVIEDKLKGEMMDLQHGSLFLKTPKIVS-SKDYS--- 83 (331)
T ss_dssp CSSEEEEECCSHHHHHHHHHHH----------HTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCSCCEEEE-CSSGG---
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------hCCCCceEEEEeCChHHHHHHHHhhhhhhhccCCCeEEE-cCCHH---
Confidence 4568999999999999999887 4565 89999999986543 3321 1222222 12332
Q ss_pred hcCCCCCcEEEEEeCC---------H--HHHHHH----HHHHHHhCCCCcEEEEecChhhH--HHHH-HCCC--CeEEcC
Q 003861 600 SAGITSPKAVMIMYTD---------K--KRTIEA----VQRLRLAFPAIPIYARAQDMMHL--LDLK-KAGA--TDAILE 659 (791)
Q Consensus 600 ~agi~~a~~viv~~~~---------d--~~n~~~----~~~ar~l~p~~~iiara~~~~~~--~~L~-~~Ga--d~Vi~p 659 (791)
.+++||.+|++.+. | +.|..+ +..+++..|+..++. +.|+.+. ..+. ..|. ++|+--
T Consensus 84 --~~~~aDiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlv-vtNPvdi~t~~~~k~sg~p~~rviG~ 160 (331)
T 4aj2_A 84 --VTANSKLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLI-VSNPVDILTYVAWKISGFPKNRVIGS 160 (331)
T ss_dssp --GGTTEEEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEE-CSSSHHHHHHHHHHHHCCCGGGEEEC
T ss_pred --HhCCCCEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE-ecChHHHHHHHHHHHhCCCHHHEEee
Confidence 37899988887642 3 456554 456677788865554 4455443 2233 3354 356655
Q ss_pred -cHHHHHHHHHHHHhhcCCChHHHH
Q 003861 660 -NAETSLQLGSKLLKGFGVMSDDVT 683 (791)
Q Consensus 660 -~~~~~~~la~~~l~~l~~~~~~~~ 683 (791)
..+-..|+-..+-+.+|+++..++
T Consensus 161 gt~LD~~R~~~~la~~lgv~~~~V~ 185 (331)
T 4aj2_A 161 GCNLDSARFRYLMGERLGVHPLSCH 185 (331)
T ss_dssp TTHHHHHHHHHHHHHHHTSCGGGCB
T ss_pred ccccHHHHHHHHHHHHhCCCHHHCE
Confidence 343345666666666777775543
No 328
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=91.15 E-value=0.29 Score=52.08 Aligned_cols=73 Identities=11% Similarity=0.044 Sum_probs=54.2
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCC---hhhHHHHHh-----cCCCEEEccCCCHHHHHhc
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLN---PSVVKESRK-----LGFPILYGDASRPAVLLSA 601 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d---~~~v~~~~~-----~~~~~v~GD~t~~~~L~~a 601 (791)
.++++|+|.|..|+.++..|. +.|. +|++++.+ +++.+++.+ .+..+...+..+.+-|.++
T Consensus 154 gk~~lVlGaGG~g~aia~~L~----------~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~ 223 (315)
T 3tnl_A 154 GKKMTICGAGGAATAICIQAA----------LDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKE 223 (315)
T ss_dssp TSEEEEECCSHHHHHHHHHHH----------HTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHH
T ss_pred CCEEEEECCChHHHHHHHHHH----------HCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhh
Confidence 357999999999999999998 7898 89999999 777766543 2334445566665555432
Q ss_pred CCCCCcEEEEEeC
Q 003861 602 GITSPKAVMIMYT 614 (791)
Q Consensus 602 gi~~a~~viv~~~ 614 (791)
+.++|.||-+|+
T Consensus 224 -l~~aDiIINaTp 235 (315)
T 3tnl_A 224 -IAESVIFTNATG 235 (315)
T ss_dssp -HHTCSEEEECSS
T ss_pred -hcCCCEEEECcc
Confidence 567898887776
No 329
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=91.15 E-value=0.43 Score=47.81 Aligned_cols=73 Identities=14% Similarity=0.093 Sum_probs=55.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhcCC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSAGI 603 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~agi 603 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++..+ ....++.+|.+|++.++++=-
T Consensus 3 k~vlITGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~ 72 (235)
T 3l77_A 3 KVAVITGASRGIGEAIARALA----------RDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSK 72 (235)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHH
Confidence 35777776 678999999998 899999999999987665432 245677899999998876522
Q ss_pred ------CCCcEEEEEeC
Q 003861 604 ------TSPKAVMIMYT 614 (791)
Q Consensus 604 ------~~a~~viv~~~ 614 (791)
.+.|.+|-..+
T Consensus 73 ~~~~~~g~id~li~~Ag 89 (235)
T 3l77_A 73 KVLERFGDVDVVVANAG 89 (235)
T ss_dssp -HHHHHSSCSEEEECCC
T ss_pred HHHHhcCCCCEEEECCc
Confidence 26787776653
No 330
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=91.11 E-value=0.31 Score=50.19 Aligned_cols=72 Identities=15% Similarity=0.151 Sum_probs=54.2
Q ss_pred CCEEEeC---CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhh-HHHHHh---cCCCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVG---FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV-VKESRK---LGFPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G---~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~-v~~~~~---~~~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.| -|.+|+.+++.|. ++|++|+++|.+++. .+++.+ ....++.+|.+|++.++++
T Consensus 8 k~vlVTGa~~s~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (269)
T 2h7i_A 8 KRILVSGIITDSSIAFHIARVAQ----------EQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGR 77 (269)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHH----------HTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCCCchHHHHHHHHH----------HCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHH
Confidence 4688889 4899999999998 889999999998865 355443 2467889999999876653
Q ss_pred -----C-CCCCcEEEEEe
Q 003861 602 -----G-ITSPKAVMIMY 613 (791)
Q Consensus 602 -----g-i~~a~~viv~~ 613 (791)
| ..+.|.+|-..
T Consensus 78 ~~~~~g~~~~iD~lv~nA 95 (269)
T 2h7i_A 78 VTEAIGAGNKLDGVVHSI 95 (269)
T ss_dssp HHHHHCTTCCEEEEEECC
T ss_pred HHHHhCCCCCceEEEECC
Confidence 1 11678776543
No 331
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=91.10 E-value=0.74 Score=51.28 Aligned_cols=113 Identities=15% Similarity=0.062 Sum_probs=72.0
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh----cCC---CEEEccCCCHHHHHhcCC
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK----LGF---PILYGDASRPAVLLSAGI 603 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~----~~~---~~v~GD~t~~~~L~~agi 603 (791)
-++.|+|+|.+|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .|. .+..++.+|.+-+- .-
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~---------~~~~~lvav~d~~~~~~~~~a~~~~~~g~~~~~~~~~~~~~~~~ll--~~ 89 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMAR---------RDDVEIVAFADPDPYMVGRAQEILKKNGKKPAKVFGNGNDDYKNML--KD 89 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHT---------CTTEEEEEEECSCHHHHHHHHHHHHHTTCCCCEEECSSTTTHHHHT--TC
T ss_pred ceEEEEecCHHHHHHHHHHHh---------CCCcEEEEEEeCCHHHHHHHHHHHHhcCCCCCceeccCCCCHHHHh--cC
Confidence 379999999999999998871 3466765 67999999877654 343 33333333444332 22
Q ss_pred CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEc
Q 003861 604 TSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAIL 658 (791)
Q Consensus 604 ~~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~ 658 (791)
.+.|+|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+.
T Consensus 90 ~~vD~V~i~tp~~~h-~~~~~~al~aG--khV~~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 148 (444)
T 2ixa_A 90 KNIDAVFVSSPWEWH-HEHGVAAMKAG--KIVGMEVSGAITLEECWDYVKVSEQTGVPLMAL 148 (444)
T ss_dssp TTCCEEEECCCGGGH-HHHHHHHHHTT--CEEEECCCCCSSHHHHHHHHHHHHHHCCCEEEC
T ss_pred CCCCEEEEcCCcHHH-HHHHHHHHHCC--CeEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 578999999997643 44455555544 467773 3455554444 5667776554
No 332
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.10 E-value=0.21 Score=51.04 Aligned_cols=73 Identities=12% Similarity=0.061 Sum_probs=54.4
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..+++.+ . ...++.+|.+|++.++++-
T Consensus 8 k~vlVTGas~GIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 77 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFA----------AEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNA 77 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHH----------HTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHH
Confidence 45777776 578999999998 889999999999987655432 2 3567889999998776531
Q ss_pred C---CCCcEEEEEeC
Q 003861 603 I---TSPKAVMIMYT 614 (791)
Q Consensus 603 i---~~a~~viv~~~ 614 (791)
+ .+.|.+|-..+
T Consensus 78 ~~~~g~id~lv~nAg 92 (252)
T 3h7a_A 78 ADAHAPLEVTIFNVG 92 (252)
T ss_dssp HHHHSCEEEEEECCC
T ss_pred HHhhCCceEEEECCC
Confidence 1 36677765543
No 333
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=91.09 E-value=0.083 Score=57.27 Aligned_cols=85 Identities=21% Similarity=0.360 Sum_probs=54.8
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+.+.|+|+|++|+.+|+.|+ ..|.+|++.|.+++. +.+.+.|...+ .+-++.+ +++|.|++
T Consensus 161 ~tvGIIGlG~IG~~vA~~l~----------~~G~~V~~~d~~~~~-~~~~~~g~~~~---~~l~ell-----~~aDiV~l 221 (352)
T 3gg9_A 161 QTLGIFGYGKIGQLVAGYGR----------AFGMNVLVWGRENSK-ERARADGFAVA---ESKDALF-----EQSDVLSV 221 (352)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSHHHH-HHHHHTTCEEC---SSHHHHH-----HHCSEEEE
T ss_pred CEEEEEeECHHHHHHHHHHH----------hCCCEEEEECCCCCH-HHHHhcCceEe---CCHHHHH-----hhCCEEEE
Confidence 46999999999999999998 889999999988643 44555565321 1223344 35788888
Q ss_pred EeCCHH--HHHHHHHHHHHhCCCCcE
Q 003861 612 MYTDKK--RTIEAVQRLRLAFPAIPI 635 (791)
Q Consensus 612 ~~~~d~--~n~~~~~~ar~l~p~~~i 635 (791)
+.+..+ .++.-....+.+.|+..+
T Consensus 222 ~~Plt~~t~~li~~~~l~~mk~gail 247 (352)
T 3gg9_A 222 HLRLNDETRSIITVADLTRMKPTALF 247 (352)
T ss_dssp CCCCSTTTTTCBCHHHHTTSCTTCEE
T ss_pred eccCcHHHHHhhCHHHHhhCCCCcEE
Confidence 776432 222222334445555333
No 334
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=91.09 E-value=0.17 Score=53.05 Aligned_cols=121 Identities=8% Similarity=-0.069 Sum_probs=69.4
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHHHhc-CC--CEEEccCCCHHHHHhcCCCCC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKL-GF--PILYGDASRPAVLLSAGITSP 606 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~~~~-~~--~~v~GD~t~~~~L~~agi~~a 606 (791)
.++++|+|.|..|+.++..|. +.|. +|++++.++++.+++.+. +. .+-..+ ++++. +++
T Consensus 126 ~k~vlvlGaGg~g~aia~~L~----------~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~------~~~l~-~~a 188 (281)
T 3o8q_A 126 GATILLIGAGGAARGVLKPLL----------DQQPASITVTNRTFAKAEQLAELVAAYGEVKAQA------FEQLK-QSY 188 (281)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------TTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEE------GGGCC-SCE
T ss_pred CCEEEEECchHHHHHHHHHHH----------hcCCCeEEEEECCHHHHHHHHHHhhccCCeeEee------HHHhc-CCC
Confidence 457999999999999999998 7896 899999999998776542 11 122112 22222 789
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhh---HHHHHHCCCCeEEcCcHHHHHHHH
Q 003861 607 KAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMH---LLDLKKAGATDAILENAETSLQLG 668 (791)
Q Consensus 607 ~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~---~~~L~~~Gad~Vi~p~~~~~~~la 668 (791)
|.||-+|+.....-........+.|+..++=-+.++.. .+..++.|+..++.-....-.|-+
T Consensus 189 DiIInaTp~gm~~~~~~l~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G~~~~~~Gl~Mlv~Qa~ 253 (281)
T 3o8q_A 189 DVIINSTSASLDGELPAIDPVIFSSRSVCYDMMYGKGYTVFNQWARQHGCAQAIDGLGMLVGQAA 253 (281)
T ss_dssp EEEEECSCCCC----CSCCGGGEEEEEEEEESCCCSSCCHHHHHHHHTTCSEEECTHHHHHHHHH
T ss_pred CEEEEcCcCCCCCCCCCCCHHHhCcCCEEEEecCCCccCHHHHHHHHCCCCEEECcHHHHHHHHH
Confidence 98888887642110000001112222112223334433 344567798766666543333333
No 335
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=91.08 E-value=0.3 Score=49.98 Aligned_cols=73 Identities=14% Similarity=0.033 Sum_probs=54.5
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hc--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KL--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++.. +. ...++.+|.+|++.++++=
T Consensus 15 k~vlITGasggiG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (266)
T 1xq1_A 15 KTVLVTGGTKGIGHAIVEEFA----------GFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQT 84 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHH
Confidence 45777765 789999999998 78999999999988765543 22 3567889999998776541
Q ss_pred C-----CCCcEEEEEeC
Q 003861 603 I-----TSPKAVMIMYT 614 (791)
Q Consensus 603 i-----~~a~~viv~~~ 614 (791)
+ .+.|.+|-..+
T Consensus 85 ~~~~~~~~id~li~~Ag 101 (266)
T 1xq1_A 85 VSSMFGGKLDILINNLG 101 (266)
T ss_dssp HHHHHTTCCSEEEEECC
T ss_pred HHHHhCCCCcEEEECCC
Confidence 1 46787776543
No 336
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=91.07 E-value=0.87 Score=48.27 Aligned_cols=132 Identities=18% Similarity=0.229 Sum_probs=82.0
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCC--CcEEEEcCChhhHHH-HHh--cC-----CCEEEccCCCHHHHHhcC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSVVKE-SRK--LG-----FPILYGDASRPAVLLSAG 602 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g--~~vvvID~d~~~v~~-~~~--~~-----~~~v~GD~t~~~~L~~ag 602 (791)
++.|+|.|.+|..++-.|. ..+ .+++++|.|+++.+. +.+ +. -.-+.+| +.+ .
T Consensus 2 KI~IiGaG~vG~~~a~~l~----------~~~~~~el~L~Di~~~k~~g~a~dl~~~~~~~~~~~v~~~--~~~-----a 64 (310)
T 2xxj_A 2 KVGIVGSGMVGSATAYALA----------LLGVAREVVLVDLDRKLAQAHAEDILHATPFAHPVWVWAG--SYG-----D 64 (310)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCCSEEEEECSSHHHHHHHHHHHHTTGGGSCCCEEEEC--CGG-----G
T ss_pred EEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEeCChhHHHHHHHHHHHhHhhcCCeEEEEC--CHH-----H
Confidence 5889999999999999886 333 589999999987653 222 11 1123332 222 2
Q ss_pred CCCCcEEEEEeCCH-----------HHHHH----HHHHHHHhCCCCcEEEEecChhhHH--HH-HHCCCC--eEEcC-cH
Q 003861 603 ITSPKAVMIMYTDK-----------KRTIE----AVQRLRLAFPAIPIYARAQDMMHLL--DL-KKAGAT--DAILE-NA 661 (791)
Q Consensus 603 i~~a~~viv~~~~d-----------~~n~~----~~~~ar~l~p~~~iiara~~~~~~~--~L-~~~Gad--~Vi~p-~~ 661 (791)
+++||.||++.+-. ..|.. ++..+++.+|+..++. ..||.+.- .+ +..|.+ +|+-- ..
T Consensus 65 ~~~aD~Vii~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~tNPv~~~t~~~~k~s~~p~~rviG~gt~ 143 (310)
T 2xxj_A 65 LEGARAVVLAAGVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLV-ATNPVDVMTQVAYALSGLPPGRVVGSGTI 143 (310)
T ss_dssp GTTEEEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE-CSSSHHHHHHHHHHHHTCCGGGEEECTTH
T ss_pred hCCCCEEEECCCCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEE-ecCchHHHHHHHHHHcCCCHHHEEecCcc
Confidence 68999998876531 34443 3455666789977666 46665542 23 333443 67665 44
Q ss_pred HHHHHHHHHHHhhcCCChHHH
Q 003861 662 ETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 662 ~~~~~la~~~l~~l~~~~~~~ 682 (791)
+-..++-+.+-+.+|+++..+
T Consensus 144 LD~~R~~~~la~~lgv~~~~v 164 (310)
T 2xxj_A 144 LDTARFRALLAEYLRVAPQSV 164 (310)
T ss_dssp HHHHHHHHHHHHHHTSCGGGE
T ss_pred hhHHHHHHHHHHHhCcCHHHe
Confidence 334566666666667776443
No 337
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=91.06 E-value=1 Score=40.59 Aligned_cols=95 Identities=13% Similarity=0.089 Sum_probs=64.3
Q ss_pred CcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcC--CCCCcEEEEEeCC-HHHHHHHHHHHHHhCCCCcEEE
Q 003861 565 WPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAG--ITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIYA 637 (791)
Q Consensus 565 ~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~ag--i~~a~~viv~~~~-d~~n~~~~~~ar~l~p~~~iia 637 (791)
.+++++|.|+...+.+ ++.|+.+...+ +..+.++... -...|.+++-..- +......+..+|+.+|++++++
T Consensus 4 ~~ilivdd~~~~~~~l~~~l~~~g~~v~~~~-~~~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ 82 (143)
T 3jte_A 4 AKILVIDDESTILQNIKFLLEIDGNEVLTAS-SSTEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVII 82 (143)
T ss_dssp CEEEEECSCHHHHHHHHHHHHHTTCEEEEES-SHHHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEE
T ss_pred CEEEEEcCCHHHHHHHHHHHHhCCceEEEeC-CHHHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEE
Confidence 4688888888765443 34666665443 3344555444 4678988877653 3456778888999999999887
Q ss_pred EecCh--hhHHHHHHCCCCeEEcCc
Q 003861 638 RAQDM--MHLLDLKKAGATDAILEN 660 (791)
Q Consensus 638 ra~~~--~~~~~L~~~Gad~Vi~p~ 660 (791)
-..+. +......++|++..+.-.
T Consensus 83 ls~~~~~~~~~~~~~~g~~~~l~kp 107 (143)
T 3jte_A 83 LTGHGDLDNAILAMKEGAFEYLRKP 107 (143)
T ss_dssp EECTTCHHHHHHHHHTTCSEEEESS
T ss_pred EECCCCHHHHHHHHHhCcceeEeCC
Confidence 76654 446677899999876544
No 338
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=91.03 E-value=0.23 Score=53.98 Aligned_cols=69 Identities=12% Similarity=0.120 Sum_probs=49.9
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCC-------CcEEEEcCChh-----hHHHHHhcCCCE-----------E
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG-------WPFVAFDLNPS-----VVKESRKLGFPI-----------L 588 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g-------~~vvvID~d~~-----~v~~~~~~~~~~-----------v 588 (791)
.++.|+|.|.+|..++..|. +.| ++|+++|.+++ +.+.+++.+... +
T Consensus 22 ~kI~iIGaG~mG~alA~~L~----------~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~i 91 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVG----------TNAKNNYLFENEVRMWIRDEFVNGERMVDIINNKHENTKYLKGVPLPHNI 91 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHH----------HHHHHCTTBCSCEEEECCSCC---CCHHHHHHHHCBCTTTSTTCBCCTTE
T ss_pred CEEEEECcCHHHHHHHHHHH----------HcCCccCCCCCeEEEEECChhhhhHHHHHHHHhcCcccccCCcccCcCCe
Confidence 36999999999999999998 677 89999999998 887776532110 1
Q ss_pred EccCCCH-HHHHhcCCCCCcEEEEEeCCH
Q 003861 589 YGDASRP-AVLLSAGITSPKAVMIMYTDK 616 (791)
Q Consensus 589 ~GD~t~~-~~L~~agi~~a~~viv~~~~d 616 (791)
..- +|+ +. ++++|.|++++.+.
T Consensus 92 ~~~-~~~~ea-----~~~aDvVilav~~~ 114 (375)
T 1yj8_A 92 VAH-SDLASV-----INDADLLIFIVPCQ 114 (375)
T ss_dssp EEE-SSTHHH-----HTTCSEEEECCCHH
T ss_pred EEE-CCHHHH-----HcCCCEEEEcCCHH
Confidence 111 122 22 35789999999853
No 339
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=91.00 E-value=0.84 Score=40.86 Aligned_cols=95 Identities=12% Similarity=0.101 Sum_probs=60.2
Q ss_pred CcEEEEcCChhhHHHHH----hcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC------HHHHHHHHHHHHHhCCCCc
Q 003861 565 WPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD------KKRTIEAVQRLRLAFPAIP 634 (791)
Q Consensus 565 ~~vvvID~d~~~v~~~~----~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~------d~~n~~~~~~ar~l~p~~~ 634 (791)
.+++++|.|+...+.++ +.|+.+... .+-.+.++...-...|.+++-..- +......+..+|+.+|+++
T Consensus 4 ~~ilivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~a~~~l~~~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ 82 (140)
T 2qr3_A 4 GTIIIVDDNKGVLTAVQLLLKNHFSKVITL-SSPVSLSTVLREENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLP 82 (140)
T ss_dssp CEEEEECSCHHHHHHHHHHHTTTSSEEEEE-CCHHHHHHHHHHSCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCC
T ss_pred ceEEEEeCCHHHHHHHHHHHHhCCcEEEEe-CCHHHHHHHHHcCCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCC
Confidence 45777777776544433 345555532 223445554444568888776543 3456677888999999999
Q ss_pred EEEEecC--hhhHHHHHHCCCCeEEcCc
Q 003861 635 IYARAQD--MMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 635 iiara~~--~~~~~~L~~~Gad~Vi~p~ 660 (791)
+++-..+ .+......+.|++.++.-.
T Consensus 83 ii~ls~~~~~~~~~~~~~~g~~~~l~kp 110 (140)
T 2qr3_A 83 VVLFTAYADIDLAVRGIKEGASDFVVKP 110 (140)
T ss_dssp EEEEEEGGGHHHHHHHHHTTCCEEEEES
T ss_pred EEEEECCCCHHHHHHHHHcCchheeeCC
Confidence 7776654 3455677889998876543
No 340
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=91.00 E-value=0.3 Score=52.13 Aligned_cols=133 Identities=15% Similarity=0.167 Sum_probs=80.5
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHH----Hh----c--CCCEEEccCCCHHHHHh
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKES----RK----L--GFPILYGDASRPAVLLS 600 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~----~~----~--~~~~v~GD~t~~~~L~~ 600 (791)
.++.|+|.|.+|..++..|. ..|. +++++|.|+++++.. ++ . ...+.. .+|.+
T Consensus 5 ~kI~VIGaG~vG~~ia~~la----------~~g~~~v~L~Di~~~~l~~~~~~l~~~~~~~~~~~~i~~--t~d~~---- 68 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIV----------QKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSG--SNTYD---- 68 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEE--ECCGG----
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCCeEEEEeCCHHHHHHHHHHHHhhhhhcCCCcEEEE--CCCHH----
Confidence 47999999999999999998 6676 899999999876532 11 1 122221 02222
Q ss_pred cCCCCCcEEEEEeCC--------------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHHHC---CCCe
Q 003861 601 AGITSPKAVMIMYTD--------------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLKKA---GATD 655 (791)
Q Consensus 601 agi~~a~~viv~~~~--------------d--~~n~~----~~~~ar~l~p~~~iiara~~~~~~--~~L~~~---Gad~ 655 (791)
.+++||.||++.+- | ..|.. ++..+++..|+..++. +.|+.+. ..+.+. -.++
T Consensus 69 -al~~aD~Vi~a~g~p~k~g~~~qe~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~tNP~~~~t~~~~~~~g~~~~r 146 (322)
T 1t2d_A 69 -DLAGADVVIVTAGFTKAPGKSDKEWNRDDLLPLNNKIMIEIGGHIKKNCPNAFIIV-VTNPVDVMVQLLHQHSGVPKNK 146 (322)
T ss_dssp -GGTTCSEEEECCSCSSCTTCCSTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEE-CSSSHHHHHHHHHHHHCCCGGG
T ss_pred -HhCCCCEEEEeCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE-ecCChHHHHHHHHHhcCCChHH
Confidence 36799999988621 1 12333 4455566678866555 3554442 333332 2455
Q ss_pred EEcC-cHHHHHHHHHHHHhhcCCChHHH
Q 003861 656 AILE-NAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 656 Vi~p-~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
|+-- ...-..|+-..+-+.+|+++..+
T Consensus 147 viG~gt~ld~~R~~~~la~~lgv~~~~v 174 (322)
T 1t2d_A 147 IIGLGGVLDTSRLKYYISQKLNVCPRDV 174 (322)
T ss_dssp EEECCHHHHHHHHHHHHHHHHTSCGGGE
T ss_pred EEeccCcccHHHHHHHHHHHhCCCHHHe
Confidence 6655 44444555656666667766443
No 341
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=90.99 E-value=0.47 Score=51.45 Aligned_cols=74 Identities=18% Similarity=0.235 Sum_probs=60.5
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.++|.|.|.+|...++.++ ..|.+|+++|.++++.+.+++.|...+. |..+++..++.. +.+|.++
T Consensus 195 g~~VlV~GaG~vG~~aiqlak----------~~Ga~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~-~g~Dvvi 262 (369)
T 1uuf_A 195 GKKVGVVGIGGLGHMGIKLAH----------AMGAHVVAFTTSEAKREAAKALGADEVV-NSRNADEMAAHL-KSFDFIL 262 (369)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHTCSEEE-ETTCHHHHHTTT-TCEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHcCCcEEe-ccccHHHHHHhh-cCCCEEE
Confidence 457999999999999999887 7899999999999999999988876543 666777666554 6789888
Q ss_pred EEeCCH
Q 003861 611 IMYTDK 616 (791)
Q Consensus 611 v~~~~d 616 (791)
-+++.+
T Consensus 263 d~~g~~ 268 (369)
T 1uuf_A 263 NTVAAP 268 (369)
T ss_dssp ECCSSC
T ss_pred ECCCCH
Confidence 888764
No 342
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=90.36 E-value=0.042 Score=54.66 Aligned_cols=65 Identities=20% Similarity=0.292 Sum_probs=47.5
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
.++.|+|+|.+|+.+++.|. +.|++|+++|.+++ .+.+.+.+..+. +.++. ++++|.|++
T Consensus 20 ~~I~iIG~G~mG~~la~~L~----------~~G~~V~~~~r~~~-~~~~~~~g~~~~----~~~~~-----~~~aDvVil 79 (201)
T 2yjz_A 20 GVVCIFGTGDFGKSLGLKML----------QCGYSVVFGSRNPQ-VSSLLPRGAEVL----CYSEA-----ASRSDVIVL 79 (201)
Confidence 36889999999999999998 78999999999887 454444443221 11222 357899999
Q ss_pred EeCCH
Q 003861 612 MYTDK 616 (791)
Q Consensus 612 ~~~~d 616 (791)
++..+
T Consensus 80 av~~~ 84 (201)
T 2yjz_A 80 AVHRE 84 (201)
Confidence 88875
No 343
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=90.99 E-value=0.24 Score=50.65 Aligned_cols=73 Identities=11% Similarity=0.034 Sum_probs=54.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hcC--CCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KLG--FPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~~--~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..++.. +.+ ..++.+|.+|++.++++=
T Consensus 10 k~vlVTGas~giG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 79 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELA----------SLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNT 79 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 35777775 688999999998 88999999999988765543 223 567889999998776531
Q ss_pred ----C-CCCcEEEEEeC
Q 003861 603 ----I-TSPKAVMIMYT 614 (791)
Q Consensus 603 ----i-~~a~~viv~~~ 614 (791)
. .+.|.+|-..+
T Consensus 80 ~~~~~~g~id~lv~~Ag 96 (260)
T 2ae2_A 80 VANHFHGKLNILVNNAG 96 (260)
T ss_dssp HHHHTTTCCCEEEECCC
T ss_pred HHHHcCCCCCEEEECCC
Confidence 1 46787776543
No 344
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=90.97 E-value=0.25 Score=51.20 Aligned_cols=70 Identities=16% Similarity=0.188 Sum_probs=53.8
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc---CCCEEEccCCCHHHHHhc-----CC
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL---GFPILYGDASRPAVLLSA-----GI 603 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~---~~~~v~GD~t~~~~L~~a-----gi 603 (791)
.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+++.+. ...++.+|.+|++.++++ ..
T Consensus 32 ~vlVTGas~GIG~aia~~l~----------~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 101 (281)
T 3ppi_A 32 SAIVSGGAGGLGEATVRRLH----------ADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQL 101 (281)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTS
T ss_pred EEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHh
Confidence 4667776 678999999998 8899999999999987776542 467889999999877653 12
Q ss_pred CCCcEEEEE
Q 003861 604 TSPKAVMIM 612 (791)
Q Consensus 604 ~~a~~viv~ 612 (791)
.+.|.+|..
T Consensus 102 ~~id~lv~~ 110 (281)
T 3ppi_A 102 GRLRYAVVA 110 (281)
T ss_dssp SEEEEEEEC
T ss_pred CCCCeEEEc
Confidence 355666654
No 345
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.95 E-value=0.27 Score=50.32 Aligned_cols=72 Identities=15% Similarity=0.094 Sum_probs=55.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhc------
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~a------ 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..+++.+ .....+.+|.+|++..+++
T Consensus 9 k~~lVTGas~gIG~a~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 78 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLV----------EGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQ 78 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHH
Confidence 35777776 679999999998 899999999999998877654 3467889999999877643
Q ss_pred CCCCCcEEEEEe
Q 003861 602 GITSPKAVMIMY 613 (791)
Q Consensus 602 gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 79 ~~g~id~lv~nA 90 (255)
T 4eso_A 79 TLGAIDLLHINA 90 (255)
T ss_dssp HHSSEEEEEECC
T ss_pred HhCCCCEEEECC
Confidence 123567666543
No 346
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=90.95 E-value=0.32 Score=50.95 Aligned_cols=72 Identities=13% Similarity=0.104 Sum_probs=54.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----h--cCCCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----K--LGFPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~--~~~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..++.. + ....++.+|.+|++.++++
T Consensus 35 k~vlVTGas~gIG~aia~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 104 (291)
T 3cxt_A 35 KIALVTGASYGIGFAIASAYA----------KAGATIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQ 104 (291)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHH
Confidence 45777775 788999999998 88999999999988765532 2 2466789999999877653
Q ss_pred ---CCCCCcEEEEEe
Q 003861 602 ---GITSPKAVMIMY 613 (791)
Q Consensus 602 ---gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 105 ~~~~~g~iD~lvnnA 119 (291)
T 3cxt_A 105 IESEVGIIDILVNNA 119 (291)
T ss_dssp HHHHTCCCCEEEECC
T ss_pred HHHHcCCCcEEEECC
Confidence 123678777654
No 347
>4hv4_A UDP-N-acetylmuramate--L-alanine ligase; MURC, yersinia pestis peptidoglycan synthesis; HET: AMP; 2.25A {Yersinia pestis} PDB: 2f00_A
Probab=90.93 E-value=0.21 Score=56.58 Aligned_cols=88 Identities=26% Similarity=0.410 Sum_probs=65.3
Q ss_pred CCCEEEeCCChhHHH-HHHHhhhhccCCCCCCCCCCcEEEEcCChh-hHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 531 SEPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVKESRKLGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 531 ~~~viI~G~G~~G~~-la~~L~~~~~~~~~~~~~g~~vvvID~d~~-~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
.+++.++|.|..|.. +|+.|. +.|++|.+.|.++. ..+++++.|..+..| .+++. +.++|.
T Consensus 22 ~~~v~viGiG~sG~s~~A~~l~----------~~G~~V~~~D~~~~~~~~~l~~~gi~~~~g--~~~~~-----~~~~d~ 84 (494)
T 4hv4_A 22 VRHIHFVGIGGAGMGGIAEVLA----------NEGYQISGSDLAPNSVTQHLTALGAQIYFH--HRPEN-----VLDASV 84 (494)
T ss_dssp CCEEEEETTTSTTHHHHHHHHH----------HTTCEEEEECSSCCHHHHHHHHTTCEEESS--CCGGG-----GTTCSE
T ss_pred CCEEEEEEEcHhhHHHHHHHHH----------hCCCeEEEEECCCCHHHHHHHHCCCEEECC--CCHHH-----cCCCCE
Confidence 468999999999996 899998 89999999998654 456788889998887 34443 356898
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR 638 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar 638 (791)
||+..+=+.+|-. ...+|+.+ ++|+-+
T Consensus 85 vV~Spgi~~~~p~-~~~a~~~g--i~v~~~ 111 (494)
T 4hv4_A 85 VVVSTAISADNPE-IVAAREAR--IPVIRR 111 (494)
T ss_dssp EEECTTSCTTCHH-HHHHHHTT--CCEEEH
T ss_pred EEECCCCCCCCHH-HHHHHHCC--CCEEcH
Confidence 8776544444444 44566664 677765
No 348
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=90.93 E-value=1.7 Score=46.02 Aligned_cols=133 Identities=18% Similarity=0.166 Sum_probs=82.7
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCC--CcEEEEcCChhhHHH----HHhc----CCC-EEEccCCCHHHHHh
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSVVKE----SRKL----GFP-ILYGDASRPAVLLS 600 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g--~~vvvID~d~~~v~~----~~~~----~~~-~v~GD~t~~~~L~~ 600 (791)
.++.|+|.|.+|..++..|. ..+ .+++++|.|+++++. +.+. +.+ -+.+ .+.+
T Consensus 7 ~KI~IIGaG~vG~~la~~l~----------~~~~~~ei~L~Di~~~~~~g~~~dl~~~~~~~~~~~~v~~--~~~~---- 70 (317)
T 3d0o_A 7 NKVVLIGNGAVGSSYAFSLV----------NQSIVDELVIIDLDTEKVRGDVMDLKHATPYSPTTVRVKA--GEYS---- 70 (317)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HHCSCSEEEEECSCHHHHHHHHHHHHHHGGGSSSCCEEEE--CCGG----
T ss_pred CEEEEECCCHHHHHHHHHHH----------hCCCCCEEEEEeCChhHhhhhhhhHHhhhhhcCCCeEEEe--CCHH----
Confidence 47999999999999999887 445 489999999976543 1221 011 2333 2222
Q ss_pred cCCCCCcEEEEEeCCH-----------HHHHH----HHHHHHHhCCCCcEEEEecChhhHH--HH-HHCCCC--eEEcC-
Q 003861 601 AGITSPKAVMIMYTDK-----------KRTIE----AVQRLRLAFPAIPIYARAQDMMHLL--DL-KKAGAT--DAILE- 659 (791)
Q Consensus 601 agi~~a~~viv~~~~d-----------~~n~~----~~~~ar~l~p~~~iiara~~~~~~~--~L-~~~Gad--~Vi~p- 659 (791)
.+++||.||++.+-. ..|.. ++..+++..|+..++. ..|+.+.- .+ +..|.+ +|+--
T Consensus 71 -a~~~aDvVvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv-~tNPv~~~t~~~~k~~~~p~~rviG~g 148 (317)
T 3d0o_A 71 -DCHDADLVVICAGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLV-ATNPVDILAYATWKFSGLPKERVIGSG 148 (317)
T ss_dssp -GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEE-CSSSHHHHHHHHHHHHCCCGGGEEECT
T ss_pred -HhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEE-ecCcHHHHHHHHHHHhCCCHHHEEecC
Confidence 267999999887531 34443 3445566688877777 56665542 23 333443 67655
Q ss_pred cHHHHHHHHHHHHhhcCCChHHH
Q 003861 660 NAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 660 ~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
...-..++-..+-+.+|+++..+
T Consensus 149 t~lD~~r~~~~la~~l~v~~~~v 171 (317)
T 3d0o_A 149 TILDSARFRLLLSEAFDVAPRSV 171 (317)
T ss_dssp THHHHHHHHHHHHHHHTSCGGGC
T ss_pred ccccHHHHHHHHHHHhCcChhhE
Confidence 44434566666666677776544
No 349
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=90.92 E-value=1.3 Score=40.80 Aligned_cols=98 Identities=12% Similarity=0.105 Sum_probs=66.4
Q ss_pred CCCCcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC-HHHHHHHHHHHHHhC--CCCc
Q 003861 562 TVGWPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAF--PAIP 634 (791)
Q Consensus 562 ~~g~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~-d~~n~~~~~~ar~l~--p~~~ 634 (791)
....+|.++|.|+...+.+ ++.|+.+... .+-.+.++.+.-...|.+++-..- +..-..++..+|+.. ++++
T Consensus 5 ~~~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~-~~~~~al~~l~~~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~p 83 (154)
T 3gt7_A 5 NRAGEILIVEDSPTQAEHLKHILEETGYQTEHV-RNGREAVRFLSLTRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIP 83 (154)
T ss_dssp --CCEEEEECSCHHHHHHHHHHHHTTTCEEEEE-SSHHHHHHHHTTCCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSC
T ss_pred cCCCcEEEEeCCHHHHHHHHHHHHHCCCEEEEe-CCHHHHHHHHHhCCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCC
Confidence 3466789999998865544 3457766543 234566777777789988887653 244567778888863 7788
Q ss_pred EEEEe--cChhhHHHHHHCCCCeEEcCc
Q 003861 635 IYARA--QDMMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 635 iiara--~~~~~~~~L~~~Gad~Vi~p~ 660 (791)
+++-. .+.+......++|++.++.-.
T Consensus 84 ii~~s~~~~~~~~~~~~~~g~~~~l~KP 111 (154)
T 3gt7_A 84 VILLTILSDPRDVVRSLECGADDFITKP 111 (154)
T ss_dssp EEEEECCCSHHHHHHHHHHCCSEEEESS
T ss_pred EEEEECCCChHHHHHHHHCCCCEEEeCC
Confidence 77766 455566677889999877644
No 350
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=90.90 E-value=0.36 Score=50.17 Aligned_cols=72 Identities=15% Similarity=0.076 Sum_probs=54.2
Q ss_pred CCEEEeCC---ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh---hHHHHHh--cCCCEEEccCCCHHHHHhc--
Q 003861 532 EPVVIVGF---GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS---VVKESRK--LGFPILYGDASRPAVLLSA-- 601 (791)
Q Consensus 532 ~~viI~G~---G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~---~v~~~~~--~~~~~v~GD~t~~~~L~~a-- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++ ..+++.+ .+..++.+|.+|++.++++
T Consensus 22 k~vlVTGas~~~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~ 91 (285)
T 2p91_A 22 KRALITGVANERSIAYGIAKSFH----------REGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKK 91 (285)
T ss_dssp CEEEECCCSSTTSHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCCCcHHHHHHHHHH----------HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHH
Confidence 46888887 589999999998 78999999999886 4444443 2367899999999877653
Q ss_pred ----CCCCCcEEEEEe
Q 003861 602 ----GITSPKAVMIMY 613 (791)
Q Consensus 602 ----gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 92 ~~~~~~g~iD~lv~~A 107 (285)
T 2p91_A 92 FLEENWGSLDIIVHSI 107 (285)
T ss_dssp HHHHHTSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 123677776654
No 351
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=90.89 E-value=0.29 Score=49.93 Aligned_cols=72 Identities=17% Similarity=0.191 Sum_probs=54.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hcC--CCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KLG--FPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~~--~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++.. +.+ ..++.+|.+|++.++++
T Consensus 3 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 72 (256)
T 1geg_A 3 KVALVTGAGQGIGKAIALRLV----------KDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQ 72 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 45777775 689999999998 88999999999988765443 223 56788999999877653
Q ss_pred ---CCCCCcEEEEEe
Q 003861 602 ---GITSPKAVMIMY 613 (791)
Q Consensus 602 ---gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 73 ~~~~~g~id~lv~nA 87 (256)
T 1geg_A 73 ARKTLGGFDVIVNNA 87 (256)
T ss_dssp HHHHTTCCCEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 123678777654
No 352
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=90.87 E-value=0.31 Score=50.51 Aligned_cols=72 Identities=11% Similarity=0.124 Sum_probs=55.5
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhc------
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~a------ 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ ....++.+|.+|++..+++
T Consensus 29 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 98 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALA----------GAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVE 98 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHH
Confidence 45677776 679999999998 899999999999998776643 3577889999999877654
Q ss_pred CCCCCcEEEEEe
Q 003861 602 GITSPKAVMIMY 613 (791)
Q Consensus 602 gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 99 ~~g~iD~lVnnA 110 (272)
T 4dyv_A 99 KFGRVDVLFNNA 110 (272)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 113667776554
No 353
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=90.85 E-value=1.6 Score=46.25 Aligned_cols=134 Identities=17% Similarity=0.113 Sum_probs=80.3
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCC--CcEEEEcCChhhHHH----HHhcCC-----CEEEccCCCHHHHH
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVG--WPFVAFDLNPSVVKE----SRKLGF-----PILYGDASRPAVLL 599 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g--~~vvvID~d~~~v~~----~~~~~~-----~~v~GD~t~~~~L~ 599 (791)
..++.|+|.|.+|..++..|. ..+ .+++++|.|+++.+. +.+... .-+.. .+.
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~----------~~~~~~ev~l~Di~~~~~~~~~~dl~~~~~~~~~~~~i~~--~~~---- 69 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALM----------NQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWH--GDY---- 69 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHH----------HHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEE--CCG----
T ss_pred CCEEEEECcCHHHHHHHHHHH----------hCCCCCEEEEEeCCcchHHHHHhhHHHHhhhcCCCeEEEc--CcH----
Confidence 457999999999999999986 334 389999999986543 122110 11222 122
Q ss_pred hcCCCCCcEEEEEeCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHHH-CCC--CeEEcC
Q 003861 600 SAGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLKK-AGA--TDAILE 659 (791)
Q Consensus 600 ~agi~~a~~viv~~~~---------d--~~n~~----~~~~ar~l~p~~~iiara~~~~~~--~~L~~-~Ga--d~Vi~p 659 (791)
..+++||.||++.+- | ..|.. ++..+++..|+..++. +.|+-+. ..+++ .|. ++|+--
T Consensus 70 -~al~~aDvViia~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~~iv-~tNPv~~~~~~~~~~s~~p~~rviG~ 147 (316)
T 1ldn_A 70 -DDCRDADLVVICAGANQKPGETRLDLVDKNIAIFRSIVESVMASGFQGLFLV-ATNPVDILTYATWKFSGLPHERVIGS 147 (316)
T ss_dssp -GGTTTCSEEEECCSCCCCTTTCSGGGHHHHHHHHHHHHHHHHHHTCCSEEEE-CSSSHHHHHHHHHHHHTCCGGGEEEC
T ss_pred -HHhCCCCEEEEcCCCCCCCCCCHHHHHHcChHHHHHHHHHHHHHCCCCEEEE-eCCchHHHHHHHHHHhCCCHHHEEec
Confidence 237899999888532 1 33443 3555666788866555 4555443 23333 343 367644
Q ss_pred -cHHHHHHHHHHHHhhcCCChHHH
Q 003861 660 -NAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 660 -~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
...-..++-..+-+.+|+++..+
T Consensus 148 gt~lD~~r~~~~la~~l~v~~~~v 171 (316)
T 1ldn_A 148 GTILDTARFRFLLGEYFSVAPQNV 171 (316)
T ss_dssp TTHHHHHHHHHHHHHHHTSCGGGE
T ss_pred ccchHHHHHHHHHHHHhCCCHHHe
Confidence 43334566666666667776443
No 354
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=90.80 E-value=0.18 Score=50.51 Aligned_cols=87 Identities=21% Similarity=0.288 Sum_probs=56.2
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCc-EEEEcCChh-hHHHHHhcCCCEEEccCCC-HHHHHhcCCCCC
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWP-FVAFDLNPS-VVKESRKLGFPILYGDASR-PAVLLSAGITSP 606 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~-vvvID~d~~-~v~~~~~~~~~~v~GD~t~-~~~L~~agi~~a 606 (791)
...+++|+|+|+.|+.+++.+.. ++.|++ |-++|.||+ +..+..-.|.++.. ..| ++.++ -.+.
T Consensus 83 ~~~~V~IvGaG~lG~aLa~~~~~--------~~~g~~iVg~~D~dp~~kiG~~~i~GvpV~~--~~dL~~~v~---~~~I 149 (212)
T 3keo_A 83 STTNVMLVGCGNIGRALLHYRFH--------DRNKMQISMAFDLDSNDLVGKTTEDGIPVYG--ISTINDHLI---DSDI 149 (212)
T ss_dssp SCEEEEEECCSHHHHHHTTCCCC--------TTSSEEEEEEEECTTSTTTTCBCTTCCBEEE--GGGHHHHC----CCSC
T ss_pred CCCEEEEECcCHHHHHHHHhhhc--------ccCCeEEEEEEeCCchhccCceeECCeEEeC--HHHHHHHHH---HcCC
Confidence 34579999999999999987530 144555 557899998 76541124777773 333 23333 3467
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhC
Q 003861 607 KAVMIMYTDKKRTIEAVQRLRLAF 630 (791)
Q Consensus 607 ~~viv~~~~d~~n~~~~~~ar~l~ 630 (791)
|.+++++++... -.++..+.+.+
T Consensus 150 d~vIIAvPs~~a-q~v~d~lv~~G 172 (212)
T 3keo_A 150 ETAILTVPSTEA-QEVADILVKAG 172 (212)
T ss_dssp CEEEECSCGGGH-HHHHHHHHHHT
T ss_pred CEEEEecCchhH-HHHHHHHHHcC
Confidence 999999987543 35666666664
No 355
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=90.79 E-value=0.48 Score=48.66 Aligned_cols=88 Identities=18% Similarity=0.174 Sum_probs=58.4
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCCh-------------------hhHHHH----Hh--cC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNP-------------------SVVKES----RK--LG 584 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~-------------------~~v~~~----~~--~~ 584 (791)
+.+|+|+|.|..|..+++.|. ..|. .++++|.|. .+++.+ ++ .+
T Consensus 28 ~~~VlvvG~GglG~~va~~La----------~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~ 97 (251)
T 1zud_1 28 DSQVLIIGLGGLGTPAALYLA----------GAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPD 97 (251)
T ss_dssp TCEEEEECCSTTHHHHHHHHH----------HTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTT
T ss_pred cCcEEEEccCHHHHHHHHHHH----------HcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCC
Confidence 568999999999999999998 6777 688998874 333332 22 23
Q ss_pred CCE--EEccCCCHHHHHhcCCCCCcEEEEEeCCHHHHHHHHHHHHHhC
Q 003861 585 FPI--LYGDASRPAVLLSAGITSPKAVMIMYTDKKRTIEAVQRLRLAF 630 (791)
Q Consensus 585 ~~~--v~GD~t~~~~L~~agi~~a~~viv~~~~d~~n~~~~~~ar~l~ 630 (791)
..+ +..+.++ +.+++. ++++|.||.++++.+.-..+...+++.+
T Consensus 98 ~~v~~~~~~~~~-~~~~~~-~~~~DvVi~~~d~~~~r~~l~~~~~~~~ 143 (251)
T 1zud_1 98 IQLTALQQRLTG-EALKDA-VARADVVLDCTDNMATRQEINAACVALN 143 (251)
T ss_dssp SEEEEECSCCCH-HHHHHH-HHHCSEEEECCSSHHHHHHHHHHHHHTT
T ss_pred CEEEEEeccCCH-HHHHHH-HhcCCEEEECCCCHHHHHHHHHHHHHhC
Confidence 332 2223333 333322 4578989888888776666677777754
No 356
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.77 E-value=0.3 Score=50.07 Aligned_cols=72 Identities=14% Similarity=0.093 Sum_probs=52.5
Q ss_pred CCEEEeCCC-h--hHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH---h----cCCCEEEccCCCHHHHHhc
Q 003861 532 EPVVIVGFG-Q--MGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR---K----LGFPILYGDASRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~G-~--~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~---~----~~~~~v~GD~t~~~~L~~a 601 (791)
+.++|.|.+ . +|+.+++.|. ++|++|++++.+++..+.+. + ....++.+|.+|++.++++
T Consensus 8 k~vlVTGasg~~GIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 77 (266)
T 3oig_A 8 RNIVVMGVANKRSIAWGIARSLH----------EAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETC 77 (266)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHH
T ss_pred CEEEEEcCCCCCcHHHHHHHHHH----------HCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHH
Confidence 468888874 4 9999999998 88999999998875443332 2 1477899999999877653
Q ss_pred C------CCCCcEEEEEe
Q 003861 602 G------ITSPKAVMIMY 613 (791)
Q Consensus 602 g------i~~a~~viv~~ 613 (791)
= ..+.|.+|-..
T Consensus 78 ~~~~~~~~g~id~li~~A 95 (266)
T 3oig_A 78 FASIKEQVGVIHGIAHCI 95 (266)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHhCCeeEEEEcc
Confidence 1 13567776554
No 357
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=90.75 E-value=0.25 Score=50.68 Aligned_cols=73 Identities=12% Similarity=0.084 Sum_probs=55.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+.+.+ . ...++.+|.+|++.++++=
T Consensus 30 k~vlITGas~gIG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 99 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLG----------SLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATG 99 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHH
Confidence 45777775 789999999998 889999999999988665532 2 3567889999999876531
Q ss_pred ----CCCCcEEEEEeC
Q 003861 603 ----ITSPKAVMIMYT 614 (791)
Q Consensus 603 ----i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 100 ~~~~~g~id~lv~~Ag 115 (262)
T 3rkr_A 100 VLAAHGRCDVLVNNAG 115 (262)
T ss_dssp HHHHHSCCSEEEECCC
T ss_pred HHHhcCCCCEEEECCC
Confidence 136787776543
No 358
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.75 E-value=0.27 Score=52.83 Aligned_cols=69 Identities=16% Similarity=0.299 Sum_probs=58.2
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.++|.|.|.+|...++.++ ..|.+|+++|.++++.+.+++.|...+. ++++.+++ .+|.++
T Consensus 177 g~~VlV~GaG~vG~~a~qla~----------~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~---~~~~~~~~----~~D~vi 239 (348)
T 3two_A 177 GTKVGVAGFGGLGSMAVKYAV----------AMGAEVSVFARNEHKKQDALSMGVKHFY---TDPKQCKE----ELDFII 239 (348)
T ss_dssp TCEEEEESCSHHHHHHHHHHH----------HTTCEEEEECSSSTTHHHHHHTTCSEEE---SSGGGCCS----CEEEEE
T ss_pred CCEEEEECCcHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHhcCCCeec---CCHHHHhc----CCCEEE
Confidence 457999999999999999887 7899999999999999999999988777 55555544 789888
Q ss_pred EEeCCH
Q 003861 611 IMYTDK 616 (791)
Q Consensus 611 v~~~~d 616 (791)
-+++++
T Consensus 240 d~~g~~ 245 (348)
T 3two_A 240 STIPTH 245 (348)
T ss_dssp ECCCSC
T ss_pred ECCCcH
Confidence 887765
No 359
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=90.74 E-value=0.27 Score=51.17 Aligned_cols=67 Identities=7% Similarity=0.060 Sum_probs=50.7
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
+++.|+|.|.+|+.+++.|. +.|.+|++.|.++++.+++.+. +.. ..+ + +++ -++++|.||
T Consensus 130 ~~v~iiGaG~~g~aia~~L~----------~~g~~V~v~~r~~~~~~~l~~~~g~~--~~~--~---~~~-~~~~aDiVi 191 (275)
T 2hk9_A 130 KSILVLGAGGASRAVIYALV----------KEGAKVFLWNRTKEKAIKLAQKFPLE--VVN--S---PEE-VIDKVQVIV 191 (275)
T ss_dssp SEEEEECCSHHHHHHHHHHH----------HHTCEEEEECSSHHHHHHHTTTSCEE--ECS--C---GGG-TGGGCSEEE
T ss_pred CEEEEECchHHHHHHHHHHH----------HcCCEEEEEECCHHHHHHHHHHcCCe--eeh--h---HHh-hhcCCCEEE
Confidence 47999999999999999998 7788999999999988877643 321 111 2 111 236899999
Q ss_pred EEeCCH
Q 003861 611 IMYTDK 616 (791)
Q Consensus 611 v~~~~d 616 (791)
.+++..
T Consensus 192 ~atp~~ 197 (275)
T 2hk9_A 192 NTTSVG 197 (275)
T ss_dssp ECSSTT
T ss_pred EeCCCC
Confidence 999875
No 360
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=90.73 E-value=0.22 Score=53.07 Aligned_cols=135 Identities=17% Similarity=0.180 Sum_probs=81.9
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCC--hhhHHH----HHh------cCCCEEEccCCCHHH
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLN--PSVVKE----SRK------LGFPILYGDASRPAV 597 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d--~~~v~~----~~~------~~~~~v~GD~t~~~~ 597 (791)
.+++.|+|.|.+|..++..|. ..|. +++++|.+ +++.+- +.+ ....+... +|.
T Consensus 8 ~~kv~ViGaG~vG~~ia~~l~----------~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~~~~~~~~~i~~t--~d~-- 73 (315)
T 3tl2_A 8 RKKVSVIGAGFTGATTAFLLA----------QKELADVVLVDIPQLENPTKGKALDMLEASPVQGFDANIIGT--SDY-- 73 (315)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCCEEEEECCGGGHHHHHHHHHHHHHHHHHHTCCCCEEEE--SCG--
T ss_pred CCEEEEECCCHHHHHHHHHHH----------hCCCCeEEEEeccchHHHHHHhhhhHHHhhhhccCCCEEEEc--CCH--
Confidence 457999999999999999997 6777 99999999 444321 111 11222221 122
Q ss_pred HHhcCCCCCcEEEEEeCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhHHH---HHHCCC--CeEE
Q 003861 598 LLSAGITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHLLD---LKKAGA--TDAI 657 (791)
Q Consensus 598 L~~agi~~a~~viv~~~~---------d--~~n~~----~~~~ar~l~p~~~iiara~~~~~~~~---L~~~Ga--d~Vi 657 (791)
..+++||.+|++.+. | ..|.. ++..+++..|+..++. +.|+.+.-- .+..|. ++|+
T Consensus 74 ---~a~~~aDvVIiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlv-vsNPvd~~t~~~~k~sg~p~~rvi 149 (315)
T 3tl2_A 74 ---ADTADSDVVVITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVV-LTNPVDAMTYSVFKEAGFPKERVI 149 (315)
T ss_dssp ---GGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEE-CCSSHHHHHHHHHHHHCCCGGGEE
T ss_pred ---HHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEE-CCChHHHHHHHHHHhcCCChHHEE
Confidence 356899999888632 2 33543 4455667788865444 445544332 244453 4566
Q ss_pred cC-cHHHHHHHHHHHHhhcCCChHHHH
Q 003861 658 LE-NAETSLQLGSKLLKGFGVMSDDVT 683 (791)
Q Consensus 658 ~p-~~~~~~~la~~~l~~l~~~~~~~~ 683 (791)
-- ...-..|.-..+-+.+|+++..++
T Consensus 150 G~gt~LD~~R~~~~la~~lgv~~~~v~ 176 (315)
T 3tl2_A 150 GQSGVLDTARFRTFIAQELNLSVKDIT 176 (315)
T ss_dssp ECCHHHHHHHHHHHHHHHHTCCGGGEE
T ss_pred eeccCcHHHHHHHHHHHHhCcCHHHce
Confidence 54 333345566666666777775543
No 361
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=90.71 E-value=0.3 Score=49.99 Aligned_cols=73 Identities=14% Similarity=0.109 Sum_probs=54.4
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+++.+ ....++.+|.+|++.++++=
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (263)
T 3ai3_A 8 KVAVITGSSSGIGLAIAEGFA----------KEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVE 77 (263)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHH
Confidence 45777776 789999999998 889999999999887655432 23567889999998776531
Q ss_pred -----CCCCcEEEEEeC
Q 003861 603 -----ITSPKAVMIMYT 614 (791)
Q Consensus 603 -----i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 78 ~~~~~~g~id~lv~~Ag 94 (263)
T 3ai3_A 78 SVRSSFGGADILVNNAG 94 (263)
T ss_dssp HHHHHHSSCSEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 136787776553
No 362
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=90.70 E-value=0.4 Score=49.21 Aligned_cols=73 Identities=14% Similarity=0.037 Sum_probs=54.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhc--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA-- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~a-- 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ .....+.+|.+|++..+++
T Consensus 11 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~ 80 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFA----------RAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAG 80 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHH
Confidence 35677775 679999999998 899999999999988655432 2356789999999877654
Q ss_pred ----CCCCCcEEEEEeC
Q 003861 602 ----GITSPKAVMIMYT 614 (791)
Q Consensus 602 ----gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 81 ~~~~~~g~id~lvnnAg 97 (262)
T 3pk0_A 81 RAVEEFGGIDVVCANAG 97 (262)
T ss_dssp HHHHHHSCCSEEEECCC
T ss_pred HHHHHhCCCCEEEECCC
Confidence 1236787776543
No 363
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=90.70 E-value=0.2 Score=50.72 Aligned_cols=73 Identities=14% Similarity=0.109 Sum_probs=54.1
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCC-hhhHHHHH----hc--CCCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLN-PSVVKESR----KL--GFPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d-~~~v~~~~----~~--~~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+ ++..+.+. +. ...++.+|.+|++.++++=
T Consensus 8 k~vlVTGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFA----------RAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVD 77 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 45777775 789999999998 789999999998 66654432 22 3667899999998877541
Q ss_pred -----CCCCcEEEEEeC
Q 003861 603 -----ITSPKAVMIMYT 614 (791)
Q Consensus 603 -----i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 78 ~~~~~~g~id~vi~~Ag 94 (258)
T 3afn_B 78 EFVAKFGGIDVLINNAG 94 (258)
T ss_dssp HHHHHHSSCSEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 126787776543
No 364
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.70 E-value=0.31 Score=49.29 Aligned_cols=73 Identities=11% Similarity=0.007 Sum_probs=55.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+++.+ . ....+.+|.+|++.++++
T Consensus 6 k~vlITGas~gIG~~~a~~l~----------~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 75 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALA----------SKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAE 75 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 45777776 678999999998 889999999999987665432 2 356788999999877653
Q ss_pred ---CCCCCcEEEEEeC
Q 003861 602 ---GITSPKAVMIMYT 614 (791)
Q Consensus 602 ---gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 76 ~~~~~~~id~li~~Ag 91 (247)
T 3lyl_A 76 IKAENLAIDILVNNAG 91 (247)
T ss_dssp HHHTTCCCSEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 2346787776653
No 365
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.70 E-value=0.52 Score=51.00 Aligned_cols=74 Identities=16% Similarity=0.242 Sum_probs=59.9
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH-hcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR-KLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~-~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
.++++|.|.|.+|...++.++ ..|.+|+++|.++++.+.++ +.|...+ -|.++++.++++. +.+|.+
T Consensus 188 g~~VlV~GaG~vG~~~~q~a~----------~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v-~~~~~~~~~~~~~-~~~D~v 255 (366)
T 1yqd_A 188 GKHIGIVGLGGLGHVAVKFAK----------AFGSKVTVISTSPSKKEEALKNFGADSF-LVSRDQEQMQAAA-GTLDGI 255 (366)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCEEEEEESCGGGHHHHHHTSCCSEE-EETTCHHHHHHTT-TCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhcCCceE-EeccCHHHHHHhh-CCCCEE
Confidence 457999999999999999998 78999999999999988877 7776644 3677777776653 579988
Q ss_pred EEEeCCH
Q 003861 610 MIMYTDK 616 (791)
Q Consensus 610 iv~~~~d 616 (791)
+-+++..
T Consensus 256 id~~g~~ 262 (366)
T 1yqd_A 256 IDTVSAV 262 (366)
T ss_dssp EECCSSC
T ss_pred EECCCcH
Confidence 8888764
No 366
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=90.68 E-value=0.17 Score=52.68 Aligned_cols=65 Identities=11% Similarity=0.122 Sum_probs=42.4
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcE-EEEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPF-VAFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~v-vvID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
++.|+|+|++|..+++.|. +. ++| .+.|.++++.+++.+ .+. .. ++.+ + -++++|.|+
T Consensus 4 ~I~iIG~G~mG~~la~~l~----------~~-~~v~~v~~~~~~~~~~~~~~~g~--~~---~~~~---~-~~~~~DvVi 63 (276)
T 2i76_A 4 VLNFVGTGTLTRFFLECLK----------DR-YEIGYILSRSIDRARNLAEVYGG--KA---ATLE---K-HPELNGVVF 63 (276)
T ss_dssp CCEEESCCHHHHHHHHTTC---------------CCCEECSSHHHHHHHHHHTCC--CC---CSSC---C-CCC---CEE
T ss_pred eEEEEeCCHHHHHHHHHHH----------Hc-CcEEEEEeCCHHHHHHHHHHcCC--cc---CCHH---H-HHhcCCEEE
Confidence 5889999999999999997 55 888 489999999888764 343 11 1211 1 245688888
Q ss_pred EEeCCHH
Q 003861 611 IMYTDKK 617 (791)
Q Consensus 611 v~~~~d~ 617 (791)
++++++.
T Consensus 64 lav~~~~ 70 (276)
T 2i76_A 64 VIVPDRY 70 (276)
T ss_dssp ECSCTTT
T ss_pred EeCChHH
Confidence 8888764
No 367
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=90.66 E-value=0.28 Score=50.66 Aligned_cols=73 Identities=18% Similarity=0.143 Sum_probs=54.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hcC----CCEEEccCCCHHHHHhcC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KLG----FPILYGDASRPAVLLSAG 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~~----~~~v~GD~t~~~~L~~ag 602 (791)
+.++|.|. |.+|+.+++.|. +.|++|++++.+++..+.+. +.+ ..++.+|.+|++.++++=
T Consensus 33 k~vlVTGasggIG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~ 102 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALV----------QQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMF 102 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHH
Confidence 45777765 789999999998 78999999999988765543 222 457789999998776531
Q ss_pred ------CCCCcEEEEEeC
Q 003861 603 ------ITSPKAVMIMYT 614 (791)
Q Consensus 603 ------i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 103 ~~~~~~~g~iD~vi~~Ag 120 (279)
T 1xg5_A 103 SAIRSQHSGVDICINNAG 120 (279)
T ss_dssp HHHHHHHCCCSEEEECCC
T ss_pred HHHHHhCCCCCEEEECCC
Confidence 236787776553
No 368
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=90.65 E-value=1.9 Score=37.88 Aligned_cols=96 Identities=20% Similarity=0.113 Sum_probs=65.4
Q ss_pred CCcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC-HHHHHHHHHHHHHhCCCCcEEEE
Q 003861 564 GWPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIYAR 638 (791)
Q Consensus 564 g~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~-d~~n~~~~~~ar~l~p~~~iiar 638 (791)
+.++.++|.|+...+.+ ++.|+.+... .+-.+.++...-...|.+++-..- +......+..+|+.+|++++++-
T Consensus 3 ~~~ilivdd~~~~~~~l~~~l~~~~~~v~~~-~~~~~~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~ 81 (126)
T 1dbw_A 3 DYTVHIVDDEEPVRKSLAFMLTMNGFAVKMH-QSAEAFLAFAPDVRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVI 81 (126)
T ss_dssp CCEEEEEESSHHHHHHHHHHHHHTTCEEEEE-SCHHHHHHHGGGCCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEE
T ss_pred CCEEEEEcCCHHHHHHHHHHHHhCCcEEEEe-CCHHHHHHHHhcCCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEE
Confidence 35789999998865443 3467766543 234566766666678888776543 23456778888888888887776
Q ss_pred ecC--hhhHHHHHHCCCCeEEcCc
Q 003861 639 AQD--MMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 639 a~~--~~~~~~L~~~Gad~Vi~p~ 660 (791)
... .+......+.||+..+.-.
T Consensus 82 s~~~~~~~~~~~~~~ga~~~l~Kp 105 (126)
T 1dbw_A 82 TGHGDVPMAVEAMKAGAVDFIEKP 105 (126)
T ss_dssp ECTTCHHHHHHHHHTTCSEEEESS
T ss_pred ECCCCHHHHHHHHHhCHHHheeCC
Confidence 654 3456677889999876543
No 369
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=90.62 E-value=0.37 Score=49.07 Aligned_cols=72 Identities=8% Similarity=-0.045 Sum_probs=53.9
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCC-CCCcEEEEcCChhhHHHHH----h--cCCCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNT-VGWPFVAFDLNPSVVKESR----K--LGFPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~-~g~~vvvID~d~~~v~~~~----~--~~~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|. |.+|+.+++.|. + .|++|++++.+++..+... + ....++.+|.+|++.++++-
T Consensus 5 k~vlITGasggIG~~~a~~L~----------~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~ 74 (276)
T 1wma_A 5 HVALVTGGNKGIGLAIVRDLC----------RLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRD 74 (276)
T ss_dssp CEEEESSCSSHHHHHHHHHHH----------HHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHH
Confidence 46777776 789999999998 7 8999999999987755432 2 24678899999998776541
Q ss_pred -----CCCCcEEEEEe
Q 003861 603 -----ITSPKAVMIMY 613 (791)
Q Consensus 603 -----i~~a~~viv~~ 613 (791)
..+.|.+|-+.
T Consensus 75 ~~~~~~g~id~li~~A 90 (276)
T 1wma_A 75 FLRKEYGGLDVLVNNA 90 (276)
T ss_dssp HHHHHHSSEEEEEECC
T ss_pred HHHHhcCCCCEEEECC
Confidence 12678776554
No 370
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=90.61 E-value=1.1 Score=53.12 Aligned_cols=69 Identities=17% Similarity=0.202 Sum_probs=51.2
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-----------cCC-----------CEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----------LGF-----------PILY 589 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-----------~~~-----------~~v~ 589 (791)
++|.|+|.|.+|..+|..|. +.|++|+++|.|++.+++..+ .|. .+..
T Consensus 313 ~kV~VIGaG~MG~~iA~~la----------~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~ 382 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALI----------LSNYPVILKEVNEKFLEAGIGRVKANLQSRVRKGSMSQEKFEKTMSLLKG 382 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------TTTCCEEEECSSHHHHHHHHHHHHHHHHHTTC----CTTHHHHTTTSEEE
T ss_pred cEEEEEcCCHhhHHHHHHHH----------hCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcceEE
Confidence 47999999999999999998 889999999999998876532 111 0111
Q ss_pred ccCCCHHHHHhcCCCCCcEEEEEeCCHH
Q 003861 590 GDASRPAVLLSAGITSPKAVMIMYTDKK 617 (791)
Q Consensus 590 GD~t~~~~L~~agi~~a~~viv~~~~d~ 617 (791)
. +|.+ .+++||.||.+..++.
T Consensus 383 ~--~d~~-----~~~~aDlVIeaVpe~~ 403 (725)
T 2wtb_A 383 S--LDYE-----SFRDVDMVIEAVIENI 403 (725)
T ss_dssp E--SSSG-----GGTTCSEEEECCCSCH
T ss_pred e--CCHH-----HHCCCCEEEEcCcCCH
Confidence 1 1222 3678999999998864
No 371
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=90.60 E-value=0.25 Score=52.14 Aligned_cols=73 Identities=5% Similarity=-0.079 Sum_probs=53.0
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
.++++|+|.|.+|+.++..|. +.|. +|++++.++++.+.+.+. +... ++..+.+.+.+ -++++|.
T Consensus 141 ~~~vlVlGaGg~g~aia~~L~----------~~G~~~V~v~nR~~~ka~~la~~~~~~~--~~~~~~~~~~~-~~~~aDi 207 (297)
T 2egg_A 141 GKRILVIGAGGGARGIYFSLL----------STAAERIDMANRTVEKAERLVREGDERR--SAYFSLAEAET-RLAEYDI 207 (297)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------TTTCSEEEEECSSHHHHHHHHHHSCSSS--CCEECHHHHHH-TGGGCSE
T ss_pred CCEEEEECcHHHHHHHHHHHH----------HCCCCEEEEEeCCHHHHHHHHHHhhhcc--CceeeHHHHHh-hhccCCE
Confidence 357999999999999999998 7897 899999999998777643 2210 01112233433 3578999
Q ss_pred EEEEeCCH
Q 003861 609 VMIMYTDK 616 (791)
Q Consensus 609 viv~~~~d 616 (791)
||.+++..
T Consensus 208 vIn~t~~~ 215 (297)
T 2egg_A 208 IINTTSVG 215 (297)
T ss_dssp EEECSCTT
T ss_pred EEECCCCC
Confidence 99888764
No 372
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=90.53 E-value=0.69 Score=49.93 Aligned_cols=110 Identities=16% Similarity=0.131 Sum_probs=70.2
Q ss_pred CCEEEeCCChhHHH-HHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~-la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
-++.|+|+|.+|+. .++.|.+ ..+.+++ +.|.|+++.+.+.+. +..-.+.| -++.|++ .+.|+
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~a~~~~~~~~~~~--~~~ll~~---~~vD~ 71 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQ---------MQDIRIVAACDSDLERARRVHRFISDIPVLDN--VPAMLNQ---VPLDA 71 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHT---------CTTEEEEEEECSSHHHHGGGGGTSCSCCEESS--HHHHHHH---SCCSE
T ss_pred ceEEEECCCHHHHHHHHHHHHh---------CCCcEEEEEEcCCHHHHHHHHHhcCCCcccCC--HHHHhcC---CCCCE
Confidence 37999999999995 8888871 3477776 779999998887654 22333332 2445554 35699
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEc
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAIL 658 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~ 658 (791)
|+++++++. -...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+.
T Consensus 72 V~i~tp~~~-H~~~~~~al~aG--khVl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 125 (359)
T 3m2t_A 72 VVMAGPPQL-HFEMGLLAMSKG--VNVFVEKPPCATLEELETLIDAARRSDVVSGVG 125 (359)
T ss_dssp EEECSCHHH-HHHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred EEEcCCcHH-HHHHHHHHHHCC--CeEEEECCCcCCHHHHHHHHHHHHHcCCEEEEE
Confidence 999998653 344555555554 467763 3454444443 4557655443
No 373
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=90.53 E-value=0.28 Score=50.54 Aligned_cols=131 Identities=15% Similarity=0.045 Sum_probs=73.7
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++|+|.|.+|+.++..|. +.|. ++.+++.++++.+++.+. +... +. +.++++ ++++|.||.
T Consensus 110 ~vliiGaGg~a~ai~~~L~----------~~G~~~I~v~nR~~~ka~~la~~-~~~~--~~---~~~~~~-~~~aDiVIn 172 (253)
T 3u62_A 110 PVVVVGAGGAARAVIYALL----------QMGVKDIWVVNRTIERAKALDFP-VKIF--SL---DQLDEV-VKKAKSLFN 172 (253)
T ss_dssp SEEEECCSHHHHHHHHHHH----------HTTCCCEEEEESCHHHHHTCCSS-CEEE--EG---GGHHHH-HHTCSEEEE
T ss_pred eEEEECcHHHHHHHHHHHH----------HcCCCEEEEEeCCHHHHHHHHHH-cccC--CH---HHHHhh-hcCCCEEEE
Confidence 8999999999999999998 7887 899999999998876543 2221 11 122221 457898887
Q ss_pred EeCCHH--HHHHHHHHHHHhCCCCcEEEEec-ChhhHHHHHHCCCCeEEcCcHHHHHHHHHHHHhhcCCChHHH
Q 003861 612 MYTDKK--RTIEAVQRLRLAFPAIPIYARAQ-DMMHLLDLKKAGATDAILENAETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 612 ~~~~d~--~n~~~~~~ar~l~p~~~iiara~-~~~~~~~L~~~Gad~Vi~p~~~~~~~la~~~l~~l~~~~~~~ 682 (791)
+++... ....+ ....+.++.-++--+. .....+..++.|+.+++.-....-.+-+...--..|.+|+..
T Consensus 173 atp~gm~p~~~~i--~~~~l~~~~~V~Divy~~T~ll~~A~~~G~~~~~~Gl~MLv~Qa~~af~~wtg~~~~~~ 244 (253)
T 3u62_A 173 TTSVGMKGEELPV--SDDSLKNLSLVYDVIYFDTPLVVKARKLGVKHIIKGNLMFYYQAMENLKIWGIYDEEVF 244 (253)
T ss_dssp CSSTTTTSCCCSC--CHHHHTTCSEEEECSSSCCHHHHHHHHHTCSEEECTHHHHHHHHHHHHHHTTCCCHHHH
T ss_pred CCCCCCCCCCCCC--CHHHhCcCCEEEEeeCCCcHHHHHHHHCCCcEEECCHHHHHHHHHHHHHHHhCCCHHHH
Confidence 775310 00000 1112344433333233 334445566779874444332222222223333346666543
No 374
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=90.50 E-value=0.23 Score=51.56 Aligned_cols=73 Identities=12% Similarity=0.038 Sum_probs=54.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c-CCCEEEccCCCHHHHHhc----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L-GFPILYGDASRPAVLLSA---- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~-~~~~v~GD~t~~~~L~~a---- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..++..+ . ...++.+|.+|++.++++
T Consensus 30 k~vlVTGas~gIG~aia~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLL----------EAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQAL 99 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHH
Confidence 35777776 789999999998 889999999999987655432 1 355677999999876653
Q ss_pred --CCCCCcEEEEEeC
Q 003861 602 --GITSPKAVMIMYT 614 (791)
Q Consensus 602 --gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 100 ~~~~g~iD~lvnnAg 114 (276)
T 2b4q_A 100 GELSARLDILVNNAG 114 (276)
T ss_dssp HHHCSCCSEEEECCC
T ss_pred HHhcCCCCEEEECCC
Confidence 1246787776553
No 375
>1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2
Probab=90.50 E-value=0.26 Score=51.32 Aligned_cols=69 Identities=12% Similarity=0.109 Sum_probs=51.8
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCC-CcEEEEcCChhh--HHHHHhcCCCEEEccCCCHHHHHhcCCC----
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG-WPFVAFDLNPSV--VKESRKLGFPILYGDASRPAVLLSAGIT---- 604 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g-~~vvvID~d~~~--v~~~~~~~~~~v~GD~t~~~~L~~agi~---- 604 (791)
+++|.|. |.+|+.+++.|. +.| ++|++++.+++. .+... +.. +.+|.+|++.++++--+
T Consensus 1 ~vlVtGatG~iG~~l~~~L~----------~~g~~~V~~~~r~~~~~~~~~~~--~~~-~~~d~~~~~~~~~~~~~~~~~ 67 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALN----------DKGITDILVVDNLKDGTKFVNLV--DLN-IADYMDKEDFLIQIMAGEEFG 67 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHH----------TTTCCCEEEEECCSSGGGGHHHH--TSC-CSEEEEHHHHHHHHHTTCCCS
T ss_pred CEEEEcCccHHHHHHHHHHH----------HCCCcEEEEEccCCCCchhhhcC--cce-eccccccHHHHHHHHhccccC
Confidence 3678887 999999999998 788 999999987654 22232 333 77999999988876322
Q ss_pred CCcEEEEEeC
Q 003861 605 SPKAVMIMYT 614 (791)
Q Consensus 605 ~a~~viv~~~ 614 (791)
++|+||-+..
T Consensus 68 ~~d~vi~~a~ 77 (310)
T 1eq2_A 68 DVEAIFHEGA 77 (310)
T ss_dssp SCCEEEECCS
T ss_pred CCcEEEECcc
Confidence 6898877653
No 376
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=90.50 E-value=0.26 Score=53.58 Aligned_cols=84 Identities=15% Similarity=0.191 Sum_probs=53.7
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.+.|+|+|++|+.+|+.++ ..|.+|++.|.+++. +.+.+.|... .+.+.+ ++++|.|+
T Consensus 176 gktvGIIGlG~IG~~vA~~l~----------~fG~~V~~~d~~~~~-~~~~~~g~~~-----~~l~el----l~~aDvV~ 235 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVLS----------GFRARIRVFDPWLPR-SMLEENGVEP-----ASLEDV----LTKSDFIF 235 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHHT----------TSCCEEEEECSSSCH-HHHHHTTCEE-----CCHHHH----HHSCSEEE
T ss_pred CCEEEEecCCcccHHHHHhhh----------hCCCEEEEECCCCCH-HHHhhcCeee-----CCHHHH----HhcCCEEE
Confidence 347999999999999999998 899999999988633 3444555432 122222 25688888
Q ss_pred EEeCCHH--HHHHHHHHHHHhCCCCc
Q 003861 611 IMYTDKK--RTIEAVQRLRLAFPAIP 634 (791)
Q Consensus 611 v~~~~d~--~n~~~~~~ar~l~p~~~ 634 (791)
++.+..+ .++.-...++.+.|+..
T Consensus 236 l~~Plt~~T~~li~~~~l~~mk~gai 261 (365)
T 4hy3_A 236 VVAAVTSENKRFLGAEAFSSMRRGAA 261 (365)
T ss_dssp ECSCSSCC---CCCHHHHHTSCTTCE
T ss_pred EcCcCCHHHHhhcCHHHHhcCCCCcE
Confidence 7766542 22222344445555533
No 377
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=90.49 E-value=0.12 Score=55.19 Aligned_cols=66 Identities=18% Similarity=0.315 Sum_probs=46.0
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+.+.|+|+|++|+.+|+.|+ ..|.+|++.|.+++..+ +.....+. +.|+++ ++++|.|+
T Consensus 139 g~tvGIiG~G~IG~~vA~~l~----------~~G~~V~~~dr~~~~~~-----~~~~~~~~----~~l~el-l~~aDiV~ 198 (315)
T 3pp8_A 139 EFSVGIMGAGVLGAKVAESLQ----------AWGFPLRCWSRSRKSWP-----GVESYVGR----EELRAF-LNQTRVLI 198 (315)
T ss_dssp TCCEEEECCSHHHHHHHHHHH----------TTTCCEEEEESSCCCCT-----TCEEEESH----HHHHHH-HHTCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------HCCCEEEEEcCCchhhh-----hhhhhccc----CCHHHH-HhhCCEEE
Confidence 457999999999999999998 89999999998876432 22222221 223322 34677777
Q ss_pred EEeCCH
Q 003861 611 IMYTDK 616 (791)
Q Consensus 611 v~~~~d 616 (791)
++.+..
T Consensus 199 l~~Plt 204 (315)
T 3pp8_A 199 NLLPNT 204 (315)
T ss_dssp ECCCCC
T ss_pred EecCCc
Confidence 776643
No 378
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=90.48 E-value=0.64 Score=51.68 Aligned_cols=110 Identities=16% Similarity=0.062 Sum_probs=68.5
Q ss_pred CCEEEeCCChhHH-HHHHHhhhhccCCCCCCCCCCcE-EEEcCChhhHHHHHh-cCCCE----EEccCCCHHHHHhcCCC
Q 003861 532 EPVVIVGFGQMGQ-VLANLLSAPLASGSDGNTVGWPF-VAFDLNPSVVKESRK-LGFPI----LYGDASRPAVLLSAGIT 604 (791)
Q Consensus 532 ~~viI~G~G~~G~-~la~~L~~~~~~~~~~~~~g~~v-vvID~d~~~v~~~~~-~~~~~----v~GD~t~~~~L~~agi~ 604 (791)
-++.|+|+|++|+ ..++.|.+ ..+.++ .+.|.|+++.+.+.+ .+... .+.| -++.+++ .
T Consensus 84 irigiIG~G~~g~~~~~~~l~~---------~~~~~lvav~d~~~~~~~~~a~~~g~~~~~~~~~~~--~~~ll~~---~ 149 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAG---------CQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN--FDKIAKD---P 149 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTT---------CSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS--GGGGGGC---T
T ss_pred eEEEEECCcHHHHHHHHHHHhh---------CCCcEEEEEEcCCHHHHHHHHHHhCCCcccccccCC--HHHHhcC---C
Confidence 3699999999997 89999861 345665 478999998877654 45431 2222 2233432 4
Q ss_pred CCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEc
Q 003861 605 SPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAIL 658 (791)
Q Consensus 605 ~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~ 658 (791)
+.|+|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+.
T Consensus 150 ~vD~V~iatp~~~h-~~~~~~al~aG--k~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 207 (433)
T 1h6d_A 150 KIDAVYIILPNSLH-AEFAIRAFKAG--KHVMCEKPMATSVADCQRMIDAAKAANKKLMIG 207 (433)
T ss_dssp TCCEEEECSCGGGH-HHHHHHHHHTT--CEEEECSSCCSSHHHHHHHHHHHHHHTCCEEEC
T ss_pred CCCEEEEcCCchhH-HHHHHHHHHCC--CcEEEcCCCCCCHHHHHHHHHHHHHhCCeEEEE
Confidence 78999999987543 44444554544 367763 3344444333 4557765553
No 379
>3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens}
Probab=90.46 E-value=0.062 Score=55.23 Aligned_cols=67 Identities=12% Similarity=0.139 Sum_probs=53.8
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++|.|. |.+|+.+++.|. +.|++|++++.+++.. ...+..++.+|.+|++.++++ ++++|+||-
T Consensus 4 ~ilVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~---~~~~~~~~~~Dl~d~~~~~~~-~~~~d~vi~ 69 (267)
T 3ay3_A 4 RLLVTGAAGGVGSAIRPHLG----------TLAHEVRLSDIVDLGA---AEAHEEIVACDLADAQAVHDL-VKDCDGIIH 69 (267)
T ss_dssp EEEEESTTSHHHHHHGGGGG----------GTEEEEEECCSSCCCC---CCTTEEECCCCTTCHHHHHHH-HTTCSEEEE
T ss_pred eEEEECCCCHHHHHHHHHHH----------hCCCEEEEEeCCCccc---cCCCccEEEccCCCHHHHHHH-HcCCCEEEE
Confidence 5888887 999999999998 7899999999887631 113567888999999988775 456898887
Q ss_pred Ee
Q 003861 612 MY 613 (791)
Q Consensus 612 ~~ 613 (791)
+.
T Consensus 70 ~a 71 (267)
T 3ay3_A 70 LG 71 (267)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 380
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=90.45 E-value=0.34 Score=49.68 Aligned_cols=72 Identities=13% Similarity=0.169 Sum_probs=53.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+++.+ . ...++.+|.+|++.++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 77 (262)
T 1zem_A 8 KVCLVTGAGGNIGLATALRLA----------EEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDS 77 (262)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHH
Confidence 45777775 789999999998 889999999999887655432 2 355788999999876543
Q ss_pred ---CCCCCcEEEEEe
Q 003861 602 ---GITSPKAVMIMY 613 (791)
Q Consensus 602 ---gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 78 ~~~~~g~id~lv~nA 92 (262)
T 1zem_A 78 VVRDFGKIDFLFNNA 92 (262)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 123678776644
No 381
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=90.44 E-value=0.27 Score=51.66 Aligned_cols=72 Identities=13% Similarity=0.122 Sum_probs=53.5
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c-----CCCEEEccCCCHHHHHhc
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L-----GFPILYGDASRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~-----~~~~v~GD~t~~~~L~~a 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++..+ . ...++.+|.+|++.++++
T Consensus 27 k~vlVTGas~gIG~aia~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~ 96 (297)
T 1xhl_A 27 KSVIITGSSNGIGRSAAVIFA----------KEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDI 96 (297)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHH
Confidence 35677765 689999999998 889999999999987655432 2 356788999999877654
Q ss_pred C------CCCCcEEEEEe
Q 003861 602 G------ITSPKAVMIMY 613 (791)
Q Consensus 602 g------i~~a~~viv~~ 613 (791)
= ..+.|.+|-..
T Consensus 97 ~~~~~~~~g~iD~lvnnA 114 (297)
T 1xhl_A 97 INTTLAKFGKIDILVNNA 114 (297)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHhcCCCCEEEECC
Confidence 1 23677776654
No 382
>2qv0_A Protein MRKE; structural genomics, transcription, PSI-2, protein structure initiative; 2.40A {Klebsiella pneumoniae}
Probab=90.43 E-value=0.72 Score=41.66 Aligned_cols=99 Identities=12% Similarity=-0.077 Sum_probs=64.5
Q ss_pred CCCCcEEEEcCChhhHHHHH----hc-CCCEEEccCCCHHHHHhcCCCCCcEEEEEeCCH-HHHHHHHHHHHHhCCCCcE
Q 003861 562 TVGWPFVAFDLNPSVVKESR----KL-GFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLAFPAIPI 635 (791)
Q Consensus 562 ~~g~~vvvID~d~~~v~~~~----~~-~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~d-~~n~~~~~~ar~l~p~~~i 635 (791)
....+++++|.|+...+.++ +. ++.++.--.+-.+.++.+.-...|.+++-..-+ ......+..+|+.++..+|
T Consensus 7 ~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~al~~l~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~i 86 (143)
T 2qv0_A 7 GEKMKVIIVEDEFLAQQELSWLINTHSQMEIVGSFDDGLDVLKFLQHNKVDAIFLDINIPSLDGVLLAQNISQFAHKPFI 86 (143)
T ss_dssp ---CEEEEECSCHHHHHHHHHHHHHHSCCEEEEEESCHHHHHHHHHHCCCSEEEECSSCSSSCHHHHHHHHTTSTTCCEE
T ss_pred CCceEEEEEcCCHHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhCCCCEEEEecCCCCCCHHHHHHHHHccCCCceE
Confidence 44577999999998755443 33 555443222334455555446789887775432 3456778888887777777
Q ss_pred EEEecChhhHHHHHHCCCCeEEcCc
Q 003861 636 YARAQDMMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 636 iara~~~~~~~~L~~~Gad~Vi~p~ 660 (791)
++-..+.+......+.|++.++.-.
T Consensus 87 i~~s~~~~~~~~~~~~g~~~~l~KP 111 (143)
T 2qv0_A 87 VFITAWKEHAVEAFELEAFDYILKP 111 (143)
T ss_dssp EEEESCCTTHHHHHHTTCSEEEESS
T ss_pred EEEeCCHHHHHHHHhCCcceEEeCC
Confidence 7777767777788899999876543
No 383
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=90.42 E-value=0.28 Score=50.72 Aligned_cols=73 Identities=7% Similarity=0.007 Sum_probs=56.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhcC-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~ag----- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|++++.+++..+++.+ .....+.+|.+|++.++++=
T Consensus 6 k~vlVTGas~gIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~ 75 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAV----------AAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLA 75 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHH
Confidence 46778776 789999999998 899999999999988776653 34678899999998776541
Q ss_pred -CCCCcEEEEEeC
Q 003861 603 -ITSPKAVMIMYT 614 (791)
Q Consensus 603 -i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 76 ~~g~id~lv~~Ag 88 (281)
T 3m1a_A 76 RYGRVDVLVNNAG 88 (281)
T ss_dssp HHSCCSEEEECCC
T ss_pred hCCCCCEEEECCC
Confidence 125677766543
No 384
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=90.41 E-value=0.5 Score=49.21 Aligned_cols=74 Identities=15% Similarity=0.102 Sum_probs=54.3
Q ss_pred CCCCE-EEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-c--CCCEEEccCCCHHHHHhc---
Q 003861 530 GSEPV-VIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-L--GFPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 530 ~~~~v-iI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-~--~~~~v~GD~t~~~~L~~a--- 601 (791)
.++++ +|-|. +-+|+.+|+.|. ++|.+|++.|.+++..++..+ . ....+.+|.+|++..+++
T Consensus 27 L~gKvalVTGas~GIG~aiA~~la----------~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~ 96 (273)
T 4fgs_A 27 LNAKIAVITGATSGIGLAAAKRFV----------AEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEK 96 (273)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHH
T ss_pred hCCCEEEEeCcCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHH
Confidence 45554 55565 469999999998 899999999999998876643 2 356778999999877653
Q ss_pred ---CCCCCcEEEEEe
Q 003861 602 ---GITSPKAVMIMY 613 (791)
Q Consensus 602 ---gi~~a~~viv~~ 613 (791)
...+-|.+|-..
T Consensus 97 ~~~~~G~iDiLVNNA 111 (273)
T 4fgs_A 97 VKAEAGRIDVLFVNA 111 (273)
T ss_dssp HHHHHSCEEEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 223567665544
No 385
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=90.38 E-value=0.26 Score=50.89 Aligned_cols=75 Identities=16% Similarity=0.127 Sum_probs=53.6
Q ss_pred cCCCCEEEe-CC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHH----HhcC--CCEEEccCCCHHHHHh
Q 003861 529 EGSEPVVIV-GF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKES----RKLG--FPILYGDASRPAVLLS 600 (791)
Q Consensus 529 ~~~~~viI~-G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~----~~~~--~~~v~GD~t~~~~L~~ 600 (791)
+.+++++++ |. +-+|+.+++.|. ++|.+|++.|.|++..++. ++.+ ...+.+|.+|++..++
T Consensus 6 ~L~gKvalVTGas~GIG~aia~~la----------~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~ 75 (255)
T 4g81_D 6 DLTGKTALVTGSARGLGFAYAEGLA----------AAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEA 75 (255)
T ss_dssp CCTTCEEEETTCSSHHHHHHHHHHH----------HTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHH
Confidence 356665544 54 679999999998 8999999999999875543 3444 4456789999887754
Q ss_pred c------CCCCCcEEEEEe
Q 003861 601 A------GITSPKAVMIMY 613 (791)
Q Consensus 601 a------gi~~a~~viv~~ 613 (791)
+ ...+-|.+|-..
T Consensus 76 ~~~~~~~~~G~iDiLVNNA 94 (255)
T 4g81_D 76 AFSKLDAEGIHVDILINNA 94 (255)
T ss_dssp HHHHHHHTTCCCCEEEECC
T ss_pred HHHHHHHHCCCCcEEEECC
Confidence 2 344677666543
No 386
>1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2
Probab=90.37 E-value=0.26 Score=52.25 Aligned_cols=71 Identities=23% Similarity=0.331 Sum_probs=53.0
Q ss_pred CEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCCh--h---hHHHHHhc-CCCEEEccCCCHHHHHhcCCC-
Q 003861 533 PVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP--S---VVKESRKL-GFPILYGDASRPAVLLSAGIT- 604 (791)
Q Consensus 533 ~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~--~---~v~~~~~~-~~~~v~GD~t~~~~L~~agi~- 604 (791)
+++|.| .|-+|+.+++.|. +.|++|+++|.+. . ..+.+.+. ...++.+|.+|++.++++ ++
T Consensus 3 ~vlVTGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~-~~~ 71 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFAL----------SQGIDLIVFDNLSRKGATDNLHWLSSLGNFEFVHGDIRNKNDVTRL-ITK 71 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCCSTTHHHHHHHHHTTCCCEEEECCTTCHHHHHHH-HHH
T ss_pred EEEEeCCCchhHHHHHHHHH----------hCCCEEEEEeCCCccCchhhhhhhccCCceEEEEcCCCCHHHHHHH-Hhc
Confidence 578888 5999999999998 7899999998642 1 23334333 378899999999988765 22
Q ss_pred -CCcEEEEEeC
Q 003861 605 -SPKAVMIMYT 614 (791)
Q Consensus 605 -~a~~viv~~~ 614 (791)
++|+||-+..
T Consensus 72 ~~~d~vih~A~ 82 (347)
T 1orr_A 72 YMPDSCFHLAG 82 (347)
T ss_dssp HCCSEEEECCC
T ss_pred cCCCEEEECCc
Confidence 4888876654
No 387
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=90.37 E-value=0.31 Score=50.28 Aligned_cols=72 Identities=18% Similarity=0.095 Sum_probs=52.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH-----hcC--CCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR-----KLG--FPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~-----~~~--~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+... +.+ ...+.+|.+|++.++++=
T Consensus 22 k~~lVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~ 91 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLA----------EAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLE 91 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHH
Confidence 35677765 789999999998 88999999999988765442 123 456789999998776531
Q ss_pred -----CCCCcEEEEEe
Q 003861 603 -----ITSPKAVMIMY 613 (791)
Q Consensus 603 -----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 92 ~~~~~~g~iD~lvnnA 107 (267)
T 1vl8_A 92 AVKEKFGKLDTVVNAA 107 (267)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 23678777554
No 388
>2l0e_A Sodium/hydrogen exchanger 1; transmembrane helix, membrane protein, NHE1; NMR {Homo sapiens}
Probab=90.36 E-value=0.046 Score=37.77 Aligned_cols=29 Identities=17% Similarity=0.303 Sum_probs=25.7
Q ss_pred CHHHHHHHHHHhhhccHHHHHHHHHhcCC
Q 003861 238 SIDEAVVIGAALSLSSSAFVLQLLAEKGE 266 (791)
Q Consensus 238 ~~~~alllga~ls~TS~avv~~lL~e~~~ 266 (791)
+|..++++|+++|+|+|..+..++++.+.
T Consensus 2 ~~~~~llfGAiis~TDpVavlaif~~~~v 30 (33)
T 2l0e_A 2 KKKDNLLFGSIISAVDPVAVLAVFEEIHK 30 (33)
T ss_dssp CCCCCCTTHHHHTTCCHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHccCCChHHHHHHHHHcCC
Confidence 45568899999999999999999999885
No 389
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=90.36 E-value=0.17 Score=53.03 Aligned_cols=69 Identities=19% Similarity=0.195 Sum_probs=50.9
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh-hHHHHHhcCCCEEEccCCCHHHHHhcCCC--CCcE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS-VVKESRKLGFPILYGDASRPAVLLSAGIT--SPKA 608 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~-~v~~~~~~~~~~v~GD~t~~~~L~~agi~--~a~~ 608 (791)
+++|.|. |-+|+.+++.|. +.|++|+++|.+++ ..+.+ ..+..++.+|.+|++.++++ ++ .+|.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~----------~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~-~~~~~~d~ 69 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLL----------ARGLEVAVLDNLATGKRENV-PKGVPFFRVDLRDKEGVERA-FREFRPTH 69 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------TTTCEEEEECCCSSCCGGGS-CTTCCEECCCTTCHHHHHHH-HHHHCCSE
T ss_pred EEEEEeCCcHHHHHHHHHHH----------HCCCEEEEEECCCcCchhhc-ccCeEEEECCCCCHHHHHHH-HHhcCCCE
Confidence 4788886 999999999998 88999999997432 21111 13678899999999887764 12 5777
Q ss_pred EEEEe
Q 003861 609 VMIMY 613 (791)
Q Consensus 609 viv~~ 613 (791)
++-+.
T Consensus 70 vi~~a 74 (311)
T 2p5y_A 70 VSHQA 74 (311)
T ss_dssp EEECC
T ss_pred EEECc
Confidence 77654
No 390
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=90.33 E-value=1 Score=41.18 Aligned_cols=99 Identities=14% Similarity=0.071 Sum_probs=61.5
Q ss_pred CCCCcEEEEcCChhhHHHH----HhcCCCEEEccC-CCHHHHHhcCCCCCcEEEEEeCC-HHHHHHHHHHHHHhCCCCcE
Q 003861 562 TVGWPFVAFDLNPSVVKES----RKLGFPILYGDA-SRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPI 635 (791)
Q Consensus 562 ~~g~~vvvID~d~~~v~~~----~~~~~~~v~GD~-t~~~~L~~agi~~a~~viv~~~~-d~~n~~~~~~ar~l~p~~~i 635 (791)
..+.+|+++|.|+...+.+ ++.+...+..-+ +-.+.++.+.-.+.|.+++-..- +......+..+|+.+|+++|
T Consensus 13 ~~~~~iLivdd~~~~~~~l~~~L~~~~~~~~v~~~~~~~~a~~~l~~~~~dlii~d~~l~~~~g~~~~~~l~~~~~~~~i 92 (152)
T 3eul_A 13 PEKVRVVVGDDHPLFREGVVRALSLSGSVNVVGEADDGAAALELIKAHLPDVALLDYRMPGMDGAQVAAAVRSYELPTRV 92 (152)
T ss_dssp -CCEEEEEECSSHHHHHHHHHHHHHHSSEEEEEEESSHHHHHHHHHHHCCSEEEEETTCSSSCHHHHHHHHHHTTCSCEE
T ss_pred CceEEEEEEcCCHHHHHHHHHHHhhCCCeEEEEEeCCHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCeE
Confidence 4556678888777654443 334533222222 22344554444568887776543 34567788899999999887
Q ss_pred EEEecCh--hhHHHHHHCCCCeEEcCc
Q 003861 636 YARAQDM--MHLLDLKKAGATDAILEN 660 (791)
Q Consensus 636 iara~~~--~~~~~L~~~Gad~Vi~p~ 660 (791)
++-..+. +......++|++..+.-.
T Consensus 93 i~~s~~~~~~~~~~~~~~g~~~~l~Kp 119 (152)
T 3eul_A 93 LLISAHDEPAIVYQALQQGAAGFLLKD 119 (152)
T ss_dssp EEEESCCCHHHHHHHHHTTCSEEEETT
T ss_pred EEEEccCCHHHHHHHHHcCCCEEEecC
Confidence 7766544 445567889999877654
No 391
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=90.33 E-value=0.32 Score=50.56 Aligned_cols=65 Identities=14% Similarity=0.156 Sum_probs=50.6
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.++++|+|.|..|+.++..|. +.|.++++++.++++.+++.+.+..+. +..+ +.++|.||
T Consensus 118 ~k~vlvlGaGGaaraia~~L~----------~~G~~v~V~nRt~~ka~~la~~~~~~~--~~~~--------l~~~DiVI 177 (269)
T 3phh_A 118 YQNALILGAGGSAKALACELK----------KQGLQVSVLNRSSRGLDFFQRLGCDCF--MEPP--------KSAFDLII 177 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCTTHHHHHHHTCEEE--SSCC--------SSCCSEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHCCCeEe--cHHH--------hccCCEEE
Confidence 568999999999999999998 788999999999999888775554332 2221 22899888
Q ss_pred EEeCC
Q 003861 611 IMYTD 615 (791)
Q Consensus 611 v~~~~ 615 (791)
-+|+.
T Consensus 178 naTp~ 182 (269)
T 3phh_A 178 NATSA 182 (269)
T ss_dssp ECCTT
T ss_pred EcccC
Confidence 77764
No 392
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=90.33 E-value=0.41 Score=49.65 Aligned_cols=73 Identities=15% Similarity=0.023 Sum_probs=55.1
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhcC-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~ag----- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ .....+.+|.+|++..+++=
T Consensus 28 k~vlVTGas~GIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFA----------KNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTA 97 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 35666665 689999999998 899999999999998776644 23567889999998776531
Q ss_pred -CCCCcEEEEEeC
Q 003861 603 -ITSPKAVMIMYT 614 (791)
Q Consensus 603 -i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 98 ~~g~iD~lv~nAg 110 (277)
T 4dqx_A 98 KWGRVDVLVNNAG 110 (277)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 136777776544
No 393
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=90.32 E-value=0.35 Score=50.81 Aligned_cols=73 Identities=12% Similarity=0.115 Sum_probs=55.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..+++.+ . ...++.+|.+|++.++++=
T Consensus 32 k~vlVTGas~gIG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 101 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFA----------RRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADE 101 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence 45778887 678999999998 899999999999988665532 2 4567889999998876541
Q ss_pred ----CCCCcEEEEEeC
Q 003861 603 ----ITSPKAVMIMYT 614 (791)
Q Consensus 603 ----i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 102 ~~~~~g~id~lvnnAg 117 (301)
T 3tjr_A 102 AFRLLGGVDVVFSNAG 117 (301)
T ss_dssp HHHHHSSCSEEEECCC
T ss_pred HHHhCCCCCEEEECCC
Confidence 136787776644
No 394
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=90.27 E-value=0.34 Score=49.48 Aligned_cols=72 Identities=10% Similarity=-0.025 Sum_probs=52.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hcC--CCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KLG--FPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~~--~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..++.. +.+ ...+.+|.+|++.++++
T Consensus 15 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~ 84 (260)
T 2zat_A 15 KVALVTASTDGIGLAIARRLA----------QDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAM 84 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHH
Confidence 45777775 789999999998 88999999999988765432 223 45678999999876653
Q ss_pred ---CCCCCcEEEEEe
Q 003861 602 ---GITSPKAVMIMY 613 (791)
Q Consensus 602 ---gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 85 ~~~~~g~iD~lv~~A 99 (260)
T 2zat_A 85 AVNLHGGVDILVSNA 99 (260)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 113677776543
No 395
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=90.27 E-value=0.1 Score=58.78 Aligned_cols=42 Identities=14% Similarity=0.263 Sum_probs=37.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCC--CCcEEEEcCChhhHHHHHhc
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTV--GWPFVAFDLNPSVVKESRKL 583 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~--g~~vvvID~d~~~v~~~~~~ 583 (791)
.++.|+|.|.+|..++..|. +. |++|+++|.|+++++.+.+.
T Consensus 6 mkI~VIG~G~mG~~lA~~La----------~~g~G~~V~~~d~~~~~~~~l~~g 49 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIA----------HMCPEIRVTVVDVNESRINAWNSP 49 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------HHCTTSEEEEECSCHHHHHHHTSS
T ss_pred cEEEEECCCHHHHHHHHHHH----------hcCCCCEEEEEECCHHHHHHHhCC
Confidence 36999999999999999998 66 89999999999999987653
No 396
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=90.26 E-value=1 Score=41.34 Aligned_cols=96 Identities=21% Similarity=0.154 Sum_probs=64.1
Q ss_pred CCcEEEEcCChhhHHHHH----h-cCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC-HHHHHHHHHHHHHhCCCCcEEE
Q 003861 564 GWPFVAFDLNPSVVKESR----K-LGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIYA 637 (791)
Q Consensus 564 g~~vvvID~d~~~v~~~~----~-~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~-d~~n~~~~~~ar~l~p~~~iia 637 (791)
..+++++|.|+...+.++ + .|+.++..-.+-.+.++.+.-...|.+++-..- +......+..+|+.+|++++++
T Consensus 5 ~~~ILivdd~~~~~~~l~~~L~~~~~~~v~~~~~~~~~a~~~l~~~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ 84 (153)
T 3cz5_A 5 TARIMLVDDHPIVREGYRRLIERRPGYAVVAEAADAGEAYRLYRETTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILI 84 (153)
T ss_dssp CEEEEEECSCHHHHHHHHHHHTTSTTEEEEEEESSHHHHHHHHHTTCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEE
T ss_pred ccEEEEECCcHHHHHHHHHHHhhCCCcEEEEEeCCHHHHHHHHhcCCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEE
Confidence 457888888887655443 3 355554222233556666655678988776543 2345678889999999889777
Q ss_pred EecC--hhhHHHHHHCCCCeEEcC
Q 003861 638 RAQD--MMHLLDLKKAGATDAILE 659 (791)
Q Consensus 638 ra~~--~~~~~~L~~~Gad~Vi~p 659 (791)
-..+ .+......+.|++..+.-
T Consensus 85 ls~~~~~~~~~~~~~~g~~~~l~k 108 (153)
T 3cz5_A 85 FTMHQGSAFALKAFEAGASGYVTK 108 (153)
T ss_dssp EESCCSHHHHHHHHHTTCSEEEET
T ss_pred EECCCCHHHHHHHHHCCCcEEEec
Confidence 6654 455667788999987654
No 397
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=90.26 E-value=0.38 Score=48.89 Aligned_cols=72 Identities=21% Similarity=0.230 Sum_probs=53.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCCh-hhHHH-HHhcC--CCEEEccCCCHHHHHhc-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP-SVVKE-SRKLG--FPILYGDASRPAVLLSA----- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~-~~v~~-~~~~~--~~~v~GD~t~~~~L~~a----- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.++ +..++ +++.+ ...+.+|.+|++.++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 77 (249)
T 2ew8_A 8 KLAVITGGANGIGRAIAERFA----------VEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVI 77 (249)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHH
Confidence 35777775 789999999998 8899999999998 66543 33333 55688999999987764
Q ss_pred -CCCCCcEEEEEe
Q 003861 602 -GITSPKAVMIMY 613 (791)
Q Consensus 602 -gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 78 ~~~g~id~lv~nA 90 (249)
T 2ew8_A 78 STFGRCDILVNNA 90 (249)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 124678776654
No 398
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=90.25 E-value=0.24 Score=49.74 Aligned_cols=85 Identities=16% Similarity=0.209 Sum_probs=49.9
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCc-EEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWP-FVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~-vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
.+.+++|+|.|+.|+.+++.+.. ...|.+ +-++|.||++..+.. .+.++. + .+| +++.--+. |.
T Consensus 84 ~~~rV~IIGAG~~G~~La~~~~~--------~~~g~~iVg~~D~dp~k~g~~i-~gv~V~-~-~~d---l~eli~~~-D~ 148 (215)
T 2vt3_A 84 EMTDVILIGVGNLGTAFLHYNFT--------KNNNTKISMAFDINESKIGTEV-GGVPVY-N-LDD---LEQHVKDE-SV 148 (215)
T ss_dssp ---CEEEECCSHHHHHHHHCC--------------CCEEEEEESCTTTTTCEE-TTEEEE-E-GGG---HHHHCSSC-CE
T ss_pred CCCEEEEEccCHHHHHHHHHHhc--------ccCCcEEEEEEeCCHHHHHhHh-cCCeee-c-hhh---HHHHHHhC-CE
Confidence 34579999999999999995320 144665 557899999765322 244443 3 333 33322223 99
Q ss_pred EEEEeCCHHHHHHHHHHHHHhC
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAF 630 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~ 630 (791)
++++++++... .++..+.+.+
T Consensus 149 ViIAvPs~~~~-ei~~~l~~aG 169 (215)
T 2vt3_A 149 AILTVPAVAAQ-SITDRLVALG 169 (215)
T ss_dssp EEECSCHHHHH-HHHHHHHHTT
T ss_pred EEEecCchhHH-HHHHHHHHcC
Confidence 99999876543 5566666654
No 399
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=90.25 E-value=0.35 Score=49.92 Aligned_cols=72 Identities=17% Similarity=0.089 Sum_probs=54.8
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhcC-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~ag----- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ .....+.+|.+|++..+++=
T Consensus 12 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 81 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLA----------RAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTID 81 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHH
Confidence 35677776 779999999998 899999999999988766543 35778899999998776541
Q ss_pred -CCCCcEEEEEe
Q 003861 603 -ITSPKAVMIMY 613 (791)
Q Consensus 603 -i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 82 ~~g~id~lv~nA 93 (271)
T 3tzq_B 82 TFGRLDIVDNNA 93 (271)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 12567776543
No 400
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=90.23 E-value=0.37 Score=50.17 Aligned_cols=115 Identities=11% Similarity=-0.061 Sum_probs=68.5
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHHHhc-CC-CEEEccCCCHHHHHhcCCCCCc
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKL-GF-PILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~~~~-~~-~~v~GD~t~~~~L~~agi~~a~ 607 (791)
.++++|+|.|..|+.++..|. +.|. ++++++.++++.+++.+. +. .+...+.. -+.+ .++|
T Consensus 120 ~k~~lvlGaGg~~~aia~~L~----------~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~---~l~~---~~~D 183 (272)
T 3pwz_A 120 NRRVLLLGAGGAVRGALLPFL----------QAGPSELVIANRDMAKALALRNELDHSRLRISRYE---ALEG---QSFD 183 (272)
T ss_dssp TSEEEEECCSHHHHHHHHHHH----------HTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG---GGTT---CCCS
T ss_pred CCEEEEECccHHHHHHHHHHH----------HcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH---Hhcc---cCCC
Confidence 457999999999999999998 7895 899999999998877543 21 12222221 1221 7899
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecChhhH---HHHHHCCCCeEEcCcH
Q 003861 608 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQDMMHL---LDLKKAGATDAILENA 661 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~~~~~---~~L~~~Gad~Vi~p~~ 661 (791)
.||-+|+.....-........+.++..++=-+.++... +..++.|+..++.-..
T Consensus 184 ivInaTp~gm~~~~~~i~~~~l~~~~~V~DlvY~P~~T~ll~~A~~~G~~~~~~Gl~ 240 (272)
T 3pwz_A 184 IVVNATSASLTADLPPLPADVLGEAALAYELAYGKGLTPFLRLAREQGQARLADGVG 240 (272)
T ss_dssp EEEECSSGGGGTCCCCCCGGGGTTCSEEEESSCSCCSCHHHHHHHHHSCCEEECTHH
T ss_pred EEEECCCCCCCCCCCCCCHHHhCcCCEEEEeecCCCCCHHHHHHHHCCCCEEECCHH
Confidence 88888764321000000011233443333334454433 4456779876766554
No 401
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=90.17 E-value=0.46 Score=48.81 Aligned_cols=73 Identities=10% Similarity=0.042 Sum_probs=53.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-----c---CCCEEEccCCCHHHHHhc-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----L---GFPILYGDASRPAVLLSA- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-----~---~~~~v~GD~t~~~~L~~a- 601 (791)
+.++|.|. +-+|+.+++.|. ++|++|+++|.+++..++..+ . ....+.+|.+|++..+++
T Consensus 9 k~~lVTGas~GIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~ 78 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLL----------EAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFA 78 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHH
Confidence 35677775 679999999998 889999999999987655432 1 256778999999876643
Q ss_pred -----CCCCCcEEEEEeC
Q 003861 602 -----GITSPKAVMIMYT 614 (791)
Q Consensus 602 -----gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 79 ~~~~~~~g~id~lvnnAg 96 (265)
T 3lf2_A 79 EACERTLGCASILVNNAG 96 (265)
T ss_dssp HHHHHHHCSCSEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 1235677766543
No 402
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=90.17 E-value=0.11 Score=55.14 Aligned_cols=70 Identities=19% Similarity=0.267 Sum_probs=53.1
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCC-CCcEEEEcCChhhHHHHH-hcCCCEEEccCCCH-HHHHhcCCCCCcE
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTV-GWPFVAFDLNPSVVKESR-KLGFPILYGDASRP-AVLLSAGITSPKA 608 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~-g~~vvvID~d~~~v~~~~-~~~~~~v~GD~t~~-~~L~~agi~~a~~ 608 (791)
+++|.|. |.+|+.+++.|. +. |++|++++.+++..+.+. ..+..++.||.+|+ +.++++ ++++|+
T Consensus 2 ~vlVtGatG~iG~~l~~~L~----------~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~d~ 70 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLL----------REDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYH-VKKCDV 70 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHH----------HSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHH-HHHCSE
T ss_pred eEEEECCCcHHHHHHHHHHH----------HhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhh-ccCCCE
Confidence 5788887 999999999998 66 899999999887755443 34678899999984 455543 246788
Q ss_pred EEEEe
Q 003861 609 VMIMY 613 (791)
Q Consensus 609 viv~~ 613 (791)
||-+.
T Consensus 71 vih~A 75 (345)
T 2bll_A 71 VLPLV 75 (345)
T ss_dssp EEECB
T ss_pred EEEcc
Confidence 87643
No 403
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=90.11 E-value=0.37 Score=49.10 Aligned_cols=72 Identities=15% Similarity=0.079 Sum_probs=55.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhcC-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~ag----- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..+++.+ .....+.+|.+|++.++++=
T Consensus 10 k~vlITGas~gIG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 79 (261)
T 3n74_A 10 KVALITGAGSGFGEGMAKRFA----------KGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALS 79 (261)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHH
Confidence 46788887 568999999998 889999999999998777653 24678889999998766431
Q ss_pred -CCCCcEEEEEe
Q 003861 603 -ITSPKAVMIMY 613 (791)
Q Consensus 603 -i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 80 ~~g~id~li~~A 91 (261)
T 3n74_A 80 KFGKVDILVNNA 91 (261)
T ss_dssp HHSCCCEEEECC
T ss_pred hcCCCCEEEECC
Confidence 12567776654
No 404
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=90.11 E-value=0.5 Score=50.67 Aligned_cols=110 Identities=16% Similarity=0.191 Sum_probs=68.6
Q ss_pred CEEEeCCChhHHH-HHH-HhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 533 PVVIVGFGQMGQV-LAN-LLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 533 ~viI~G~G~~G~~-la~-~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
++.|+|+|.+|+. .++ .+. ...+.+++ +.|.|+++.+...+....-.+.|. ++.|++ .+.|+|
T Consensus 4 rvgiiG~G~~g~~~~~~~~~~---------~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~~--~~ll~~---~~~D~V 69 (345)
T 3f4l_A 4 NCAFIGFGKSTTRYHLPYVLN---------RKDSWHVAHIFRRHAKPEEQAPIYSHIHFTSDL--DEVLND---PDVKLV 69 (345)
T ss_dssp EEEEECCSHHHHHHTHHHHTT---------CTTTEEEEEEECSSCCGGGGSGGGTTCEEESCT--HHHHTC---TTEEEE
T ss_pred EEEEEecCHHHHHHHHHHHHh---------cCCCeEEEEEEcCCHhHHHHHHhcCCCceECCH--HHHhcC---CCCCEE
Confidence 6899999999996 555 444 14577777 789998876554444323344332 344442 578999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEcC
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAILE 659 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~p 659 (791)
+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+..
T Consensus 70 ~i~tp~~~h-~~~~~~al~aG--k~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~ 123 (345)
T 3f4l_A 70 VVCTHADSH-FEYAKRALEAG--KNVLVEKPFTPTLAQAKELFALAKSKGLTVTPYQ 123 (345)
T ss_dssp EECSCGGGH-HHHHHHHHHTT--CEEEECSSSCSSHHHHHHHHHHHHHHTCCEEECC
T ss_pred EEcCChHHH-HHHHHHHHHcC--CcEEEeCCCCCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 999987643 44455555544 467774 4565555544 55677665543
No 405
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=90.08 E-value=0.044 Score=57.72 Aligned_cols=98 Identities=12% Similarity=0.042 Sum_probs=59.4
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCC--EEEccCCCHHHHHhcCCCCCcEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFP--ILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~--~v~GD~t~~~~L~~agi~~a~~v 609 (791)
.++.|+|.|.+|..++..|. +.|++|++++.+++.++..++.|.. .+..| . .++-.+.+|.|
T Consensus 3 mkI~iiGaGa~G~~~a~~L~----------~~g~~V~~~~r~~~~~~~~~~~g~~~~~~~~~--~----~~~~~~~~D~v 66 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQ----------QSLPHTTLIGRHAKTITYYTVPHAPAQDIVVK--G----YEDVTNTFDVI 66 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HHCTTCEEEESSCEEEEEESSTTSCCEEEEEE--E----GGGCCSCEEEE
T ss_pred cEEEEECCCHHHHHHHHHHH----------HCCCeEEEEEeccCcEEEEecCCeeccceecC--c----hHhcCCCCCEE
Confidence 47999999999999999998 7899999999997654322222211 11111 1 11112689999
Q ss_pred EEEeCCHHHHHHHHHHHHHh-CCCCcEEEEecChhhHH
Q 003861 610 MIMYTDKKRTIEAVQRLRLA-FPAIPIYARAQDMMHLL 646 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l-~p~~~iiara~~~~~~~ 646 (791)
++++.... .-.+...++.. .++..|+.-++--++.+
T Consensus 67 ilavk~~~-~~~~l~~l~~~l~~~~~iv~~~nGi~~~~ 103 (294)
T 3g17_A 67 IIAVKTHQ-LDAVIPHLTYLAHEDTLIILAQNGYGQLE 103 (294)
T ss_dssp EECSCGGG-HHHHGGGHHHHEEEEEEEEECCSSCCCGG
T ss_pred EEeCCccC-HHHHHHHHHHhhCCCCEEEEeccCcccHh
Confidence 99987643 22333344443 44444555555444433
No 406
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=90.07 E-value=0.31 Score=49.89 Aligned_cols=72 Identities=14% Similarity=0.074 Sum_probs=54.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhc--C
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSA--G 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~a--g 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+.+.+ . ....+.+|.+|++.++++ .
T Consensus 6 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~ 75 (260)
T 2qq5_A 6 QVCVVTGASRGIGRGIALQLC----------KAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQ 75 (260)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHH
Confidence 35677765 689999999998 889999999999887655432 2 356788999999876653 1
Q ss_pred -----CCCCcEEEEEe
Q 003861 603 -----ITSPKAVMIMY 613 (791)
Q Consensus 603 -----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 76 ~~~~~~g~id~lvnnA 91 (260)
T 2qq5_A 76 VDREQQGRLDVLVNNA 91 (260)
T ss_dssp HHHHHTTCCCEEEECC
T ss_pred HHHhcCCCceEEEECC
Confidence 45678887665
No 407
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=90.05 E-value=0.38 Score=49.66 Aligned_cols=72 Identities=10% Similarity=-0.022 Sum_probs=54.0
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hc--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KL--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..++.. +. ....+.+|.+|++.++++=
T Consensus 22 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~ 91 (273)
T 1ae1_A 22 TTALVTGGSKGIGYAIVEELA----------GLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQT 91 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCcchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 45777775 789999999998 88999999999988765542 22 3567889999998776531
Q ss_pred ----C-CCCcEEEEEe
Q 003861 603 ----I-TSPKAVMIMY 613 (791)
Q Consensus 603 ----i-~~a~~viv~~ 613 (791)
. .+.|.+|-..
T Consensus 92 ~~~~~~g~id~lv~nA 107 (273)
T 1ae1_A 92 VAHVFDGKLNILVNNA 107 (273)
T ss_dssp HHHHTTSCCCEEEECC
T ss_pred HHHHcCCCCcEEEECC
Confidence 2 4678776654
No 408
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=90.01 E-value=0.29 Score=50.54 Aligned_cols=72 Identities=14% Similarity=0.098 Sum_probs=53.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---------cCCCEEEccCCCHHHHHhc
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---------LGFPILYGDASRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---------~~~~~v~GD~t~~~~L~~a 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++..+ ....++.+|.+|++.++++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~ 76 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFA----------REGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEI 76 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHH
Confidence 35777776 789999999998 789999999999987665432 1256788999999877654
Q ss_pred C------CCCCcEEEEEe
Q 003861 602 G------ITSPKAVMIMY 613 (791)
Q Consensus 602 g------i~~a~~viv~~ 613 (791)
= ..+.|.+|-..
T Consensus 77 ~~~~~~~~g~id~lv~~A 94 (278)
T 1spx_A 77 LSTTLGKFGKLDILVNNA 94 (278)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 1 12667776544
No 409
>2pln_A HP1043, response regulator; signaling protein; 1.80A {Helicobacter pylori} PDB: 2hqo_A
Probab=89.97 E-value=1.2 Score=39.90 Aligned_cols=94 Identities=18% Similarity=0.142 Sum_probs=56.0
Q ss_pred CCCCcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCCHHHHHHHHHHHHHhCC-CCcEE
Q 003861 562 TVGWPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDKKRTIEAVQRLRLAFP-AIPIY 636 (791)
Q Consensus 562 ~~g~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~d~~n~~~~~~ar~l~p-~~~ii 636 (791)
..+..++++|.|+...+.+ ++.|+.+...+ +-.+.++.+.-...|.++ .++ ......+..+|+. + +++++
T Consensus 16 ~~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~al~~l~~~~~dlvi--~~~-~~g~~~~~~l~~~-~~~~~ii 90 (137)
T 2pln_A 16 RGSMRVLLIEKNSVLGGEIEKGLNVKGFMADVTE-SLEDGEYLMDIRNYDLVM--VSD-KNALSFVSRIKEK-HSSIVVL 90 (137)
T ss_dssp TTCSEEEEECSCHHHHHHHHHHHHHTTCEEEEES-CHHHHHHHHHHSCCSEEE--ECS-TTHHHHHHHHHHH-STTSEEE
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHHcCcEEEEeC-CHHHHHHHHHcCCCCEEE--EcC-ccHHHHHHHHHhc-CCCccEE
Confidence 3455566666666553332 23455544322 223344443335678776 333 3456778888888 7 88877
Q ss_pred EEecC--hhhHHHHHHCCCCeEEcCc
Q 003861 637 ARAQD--MMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 637 ara~~--~~~~~~L~~~Gad~Vi~p~ 660 (791)
+-... .+......+.|++.++.-.
T Consensus 91 ~ls~~~~~~~~~~~~~~g~~~~l~kP 116 (137)
T 2pln_A 91 VSSDNPTSEEEVHAFEQGADDYIAKP 116 (137)
T ss_dssp EEESSCCHHHHHHHHHTTCSEEEESS
T ss_pred EEeCCCCHHHHHHHHHcCCceeeeCC
Confidence 76654 4566777889999877644
No 410
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=89.96 E-value=0.29 Score=55.23 Aligned_cols=41 Identities=17% Similarity=0.359 Sum_probs=37.8
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCC-CC-cEEEEcCChh----hHHHHHh
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTV-GW-PFVAFDLNPS----VVKESRK 582 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~-g~-~vvvID~d~~----~v~~~~~ 582 (791)
.++.|+|.|.+|..+|..|. +. |+ +|+++|.|++ +++.+.+
T Consensus 19 mkIaVIGlG~mG~~lA~~la----------~~~G~~~V~~~D~~~~~~~~kv~~l~~ 65 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFA----------DAPCFEKVLGFQRNSKSSGYKIEMLNR 65 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHH----------HSTTCCEEEEECCCCTTTTTHHHHHTT
T ss_pred CEEEEECcCHHHHHHHHHHH----------HhCCCCeEEEEECChhHhHHHHHHHHh
Confidence 47999999999999999998 78 99 9999999999 9988875
No 411
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=89.96 E-value=0.38 Score=50.26 Aligned_cols=73 Identities=8% Similarity=0.003 Sum_probs=54.9
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-----------cCCCEEEccCCCHHHHH
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-----------LGFPILYGDASRPAVLL 599 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-----------~~~~~v~GD~t~~~~L~ 599 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+...+ ....++.+|.+|++.++
T Consensus 19 k~vlVTGasggIG~~la~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~ 88 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELL----------ELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVN 88 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHH
Confidence 45777765 789999999998 889999999999887654432 23567889999998877
Q ss_pred hcC------CCCCcEEEEEeC
Q 003861 600 SAG------ITSPKAVMIMYT 614 (791)
Q Consensus 600 ~ag------i~~a~~viv~~~ 614 (791)
++= ..+.|.+|-+.+
T Consensus 89 ~~~~~~~~~~g~id~li~~Ag 109 (303)
T 1yxm_A 89 NLVKSTLDTFGKINFLVNNGG 109 (303)
T ss_dssp HHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHcCCCCEEEECCC
Confidence 641 136788876654
No 412
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=89.95 E-value=0.42 Score=48.99 Aligned_cols=73 Identities=16% Similarity=0.122 Sum_probs=52.9
Q ss_pred CCC-CEEEeCCC---hhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHH
Q 003861 530 GSE-PVVIVGFG---QMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVL 598 (791)
Q Consensus 530 ~~~-~viI~G~G---~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L 598 (791)
.++ .++|-|.+ -+|+.+|+.|. ++|.+|++.|.+++..+++.+ .....+.+|.+|++..
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la----------~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 73 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLD----------QLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEV 73 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHH
Confidence 344 46677853 59999999998 899999999999877655432 1356788999998766
Q ss_pred Hhc------CCCCCcEEEEE
Q 003861 599 LSA------GITSPKAVMIM 612 (791)
Q Consensus 599 ~~a------gi~~a~~viv~ 612 (791)
+++ ...+.|.+|-.
T Consensus 74 ~~~~~~~~~~~G~iD~lvnn 93 (256)
T 4fs3_A 74 INGFEQIGKDVGNIDGVYHS 93 (256)
T ss_dssp HHHHHHHHHHHCCCSEEEEC
T ss_pred HHHHHHHHHHhCCCCEEEec
Confidence 542 23467777644
No 413
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=89.93 E-value=0.45 Score=49.85 Aligned_cols=72 Identities=15% Similarity=-0.001 Sum_probs=53.8
Q ss_pred CCEEEeCCC---hhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----h-cCCCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGFG---QMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----K-LGFPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~G---~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~-~~~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|.+ .+|+.+++.|. ++|++|+++|.+++..+.+. + ....++.+|.+|++.++++=
T Consensus 31 k~vlVTGasg~~GIG~~ia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 100 (296)
T 3k31_A 31 KKGVIIGVANDKSLAWGIAKAVC----------AQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFK 100 (296)
T ss_dssp CEEEEECCCSTTSHHHHHHHHHH----------HTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHH
T ss_pred CEEEEEeCCCCCCHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHH
Confidence 458888986 89999999998 89999999999976543332 1 23568899999998776541
Q ss_pred -----CCCCcEEEEEe
Q 003861 603 -----ITSPKAVMIMY 613 (791)
Q Consensus 603 -----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 101 ~~~~~~g~iD~lVnnA 116 (296)
T 3k31_A 101 VLAEEWGSLDFVVHAV 116 (296)
T ss_dssp HHHHHHSCCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 13678777654
No 414
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=89.93 E-value=0.38 Score=53.04 Aligned_cols=71 Identities=11% Similarity=0.065 Sum_probs=53.8
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhh---HHHH---------------HhcCCCEEEccC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV---VKES---------------RKLGFPILYGDA 592 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~---v~~~---------------~~~~~~~v~GD~ 592 (791)
++++|.|. |.+|+.+++.|. +.|++|++++.+++. .+++ ...+..++.||.
T Consensus 70 ~~vlVTGatG~iG~~l~~~L~----------~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl 139 (427)
T 4f6c_A 70 GNTLLTGATGFLGAYLIEALQ----------GYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDF 139 (427)
T ss_dssp EEEEEECTTSHHHHHHHHHHT----------TTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC
T ss_pred CEEEEecCCcHHHHHHHHHHH----------cCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCC
Confidence 47899996 999999999997 889999999988772 2221 125788999999
Q ss_pred CCHHHHHhcCCCCCcEEEEEeC
Q 003861 593 SRPAVLLSAGITSPKAVMIMYT 614 (791)
Q Consensus 593 t~~~~L~~agi~~a~~viv~~~ 614 (791)
+|++.++ ...++|+||-+..
T Consensus 140 ~d~~~l~--~~~~~d~Vih~A~ 159 (427)
T 4f6c_A 140 ECMDDVV--LPENMDTIIHAGA 159 (427)
T ss_dssp ---CCCC--CSSCCSEEEECCC
T ss_pred CCcccCC--CcCCCCEEEECCc
Confidence 9988888 6678998886543
No 415
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=89.91 E-value=0.19 Score=52.76 Aligned_cols=71 Identities=18% Similarity=0.206 Sum_probs=50.5
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcC-Chhh---HHHHHh-----cCCCEEEccCCCHHHHHhc
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSV---VKESRK-----LGFPILYGDASRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~-d~~~---v~~~~~-----~~~~~v~GD~t~~~~L~~a 601 (791)
++++|.| .|-+|+.+++.|. +.|++|++++. +++. .+.+.+ .+..++.||.+|++.++++
T Consensus 2 k~vlVTGatG~iG~~l~~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~ 71 (322)
T 2p4h_X 2 GRVCVTGGTGFLGSWIIKSLL----------ENGYSVNTTIRADPERKRDVSFLTNLPGASEKLHFFNADLSNPDSFAAA 71 (322)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEECCCC----CCCHHHHTSTTHHHHEEECCCCTTCGGGGHHH
T ss_pred CEEEEECChhHHHHHHHHHHH----------HCCCEEEEEEeCCccchhHHHHHHhhhccCCceEEEecCCCCHHHHHHH
Confidence 3578888 4999999999998 78999999887 6532 222211 1356788999999988765
Q ss_pred CCCCCcEEEEEe
Q 003861 602 GITSPKAVMIMY 613 (791)
Q Consensus 602 gi~~a~~viv~~ 613 (791)
++++|+||-+.
T Consensus 72 -~~~~d~vih~A 82 (322)
T 2p4h_X 72 -IEGCVGIFHTA 82 (322)
T ss_dssp -HTTCSEEEECC
T ss_pred -HcCCCEEEEcC
Confidence 35678777654
No 416
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=89.91 E-value=0.38 Score=50.17 Aligned_cols=73 Identities=19% Similarity=0.219 Sum_probs=54.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhc--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA-- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~a-- 601 (791)
+.++|.|. |.+|+.+++.|. +.|++|++++.+++..+...+ ....++.+|.+|++.++++
T Consensus 27 k~vlITGasggiG~~la~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~ 96 (302)
T 1w6u_A 27 KVAFITGGGTGLGKGMTTLLS----------SLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVS 96 (302)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHH
Confidence 35777775 789999999998 789999999999987654432 2366789999999877643
Q ss_pred ----CCCCCcEEEEEeC
Q 003861 602 ----GITSPKAVMIMYT 614 (791)
Q Consensus 602 ----gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 97 ~~~~~~g~id~li~~Ag 113 (302)
T 1w6u_A 97 ELIKVAGHPNIVINNAA 113 (302)
T ss_dssp HHHHHTCSCSEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 1236687776554
No 417
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=89.91 E-value=1.1 Score=48.47 Aligned_cols=118 Identities=16% Similarity=0.157 Sum_probs=70.5
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHH-hcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESR-KLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~-~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
=+|.|+|+|.+|+.=++.+.+ +.. ...+..+.+++ +.|.|+++.+.+. +.+.+-.+.|. ++.|++ .+.|+|
T Consensus 26 irvgiIG~G~ig~~H~~a~~~-~~~-~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~d~--~ell~~---~~iDaV 98 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAWNA-VKT-VFGDVERPRLVHLAEANAGLAEARAGEFGFEKATADW--RALIAD---PEVDVV 98 (393)
T ss_dssp CEEEEECCSHHHHHHHHHHTT-HHH-HHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEESCH--HHHHHC---TTCCEE
T ss_pred ccEEEEcCCHHHHHHHHHHHh-hhh-hhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecCCH--HHHhcC---CCCcEE
Confidence 379999999999987666541 000 00012355655 5599999988765 46776666543 345553 578999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEcC
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAILE 659 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~p 659 (791)
+++|+++.. ...+..|-+.+ .+|++. +.+.+..+.+ ++.|....+..
T Consensus 99 ~IatP~~~H-~~~a~~al~aG--khVl~EKPla~~~~ea~~l~~~a~~~g~~l~vg~ 152 (393)
T 4fb5_A 99 SVTTPNQFH-AEMAIAALEAG--KHVWCEKPMAPAYADAERMLATAERSGKVAALGY 152 (393)
T ss_dssp EECSCGGGH-HHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHSSSCEEECC
T ss_pred EECCChHHH-HHHHHHHHhcC--CeEEEccCCcccHHHHHHhhhhHHhcCCcccccc
Confidence 999998643 44455555554 467774 4455554444 56676655443
No 418
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=89.88 E-value=0.56 Score=48.42 Aligned_cols=71 Identities=7% Similarity=-0.023 Sum_probs=53.3
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hc--CCCEEEccCCCHHHHHhc----
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KL--GFPILYGDASRPAVLLSA---- 601 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~--~~~~v~GD~t~~~~L~~a---- 601 (791)
.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++.. +. ....+.+|.+|++.++++
T Consensus 30 ~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~ 99 (270)
T 3ftp_A 30 VAIVTGASRGIGRAIALELA----------RRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVEST 99 (270)
T ss_dssp EEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHH
Confidence 4666665 679999999998 89999999999998765543 22 467888999999877653
Q ss_pred --CCCCCcEEEEEe
Q 003861 602 --GITSPKAVMIMY 613 (791)
Q Consensus 602 --gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 100 ~~~~g~iD~lvnnA 113 (270)
T 3ftp_A 100 LKEFGALNVLVNNA 113 (270)
T ss_dssp HHHHSCCCEEEECC
T ss_pred HHHcCCCCEEEECC
Confidence 123677777654
No 419
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=89.87 E-value=0.56 Score=48.35 Aligned_cols=89 Identities=16% Similarity=0.225 Sum_probs=59.7
Q ss_pred CCEEEeCC--ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc--------CCCEEEccCCCHHHHHhc
Q 003861 532 EPVVIVGF--GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL--------GFPILYGDASRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~--G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~--------~~~~v~GD~t~~~~L~~a 601 (791)
.+|+=+|| |.....+++.+. ..|.+|+.||.+++.++.+++. .+.+++||..+.
T Consensus 72 ~~vLDlGcGtG~~~~~la~~~~----------~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~------ 135 (261)
T 4gek_A 72 TQVYDLGCSLGAATLSVRRNIH----------HDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI------ 135 (261)
T ss_dssp CEEEEETCTTTHHHHHHHHTCC----------SSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC------
T ss_pred CEEEEEeCCCCHHHHHHHHhcC----------CCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc------
Confidence 35666666 567777888775 6789999999999998887642 356788998753
Q ss_pred CCCCCcEEEEEeC----CH-HHHHHHHHHHHHhCCCCcEE
Q 003861 602 GITSPKAVMIMYT----DK-KRTIEAVQRLRLAFPAIPIY 636 (791)
Q Consensus 602 gi~~a~~viv~~~----~d-~~n~~~~~~ar~l~p~~~ii 636 (791)
..+++|.+++... ++ +....+....|-+.|+-..+
T Consensus 136 ~~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~li 175 (261)
T 4gek_A 136 AIENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALV 175 (261)
T ss_dssp CCCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEE
T ss_pred cccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEE
Confidence 4578897766532 12 22233445556677765533
No 420
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=89.87 E-value=0.41 Score=48.89 Aligned_cols=72 Identities=11% Similarity=0.055 Sum_probs=53.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ . ....+.+|.+|++..+++=
T Consensus 13 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 82 (256)
T 3gaf_A 13 AVAIVTGAAAGIGRAIAGTFA----------KAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKA 82 (256)
T ss_dssp CEEEECSCSSHHHHHHHHHHH----------HHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 35667766 679999999998 889999999999987665432 2 3567889999998766531
Q ss_pred ----CCCCcEEEEEe
Q 003861 603 ----ITSPKAVMIMY 613 (791)
Q Consensus 603 ----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 83 ~~~~~g~id~lv~nA 97 (256)
T 3gaf_A 83 ALDQFGKITVLVNNA 97 (256)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 13667776554
No 421
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=89.81 E-value=1.1 Score=45.88 Aligned_cols=132 Identities=15% Similarity=0.200 Sum_probs=75.6
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEE-EcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVA-FDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvv-ID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++|+|+|++|+.+++.+.+ ..+ +++. +|.+++. +.++++. .|. +++ . ++|++|-
T Consensus 5 kI~ViGaGrMG~~i~~~l~~---------~~~-eLva~~d~~~~~-----~~gv~v~-~dl------~~l-~-~~DVvID 60 (243)
T 3qy9_A 5 KILLIGYGAMNQRVARLAEE---------KGH-EIVGVIENTPKA-----TTPYQQY-QHI------ADV-K-GADVAID 60 (243)
T ss_dssp EEEEECCSHHHHHHHHHHHH---------TTC-EEEEEECSSCC-------CCSCBC-SCT------TTC-T-TCSEEEE
T ss_pred EEEEECcCHHHHHHHHHHHh---------CCC-EEEEEEecCccc-----cCCCcee-CCH------HHH-h-CCCEEEE
Confidence 69999999999999999972 334 6654 7887762 2344332 222 222 2 7897764
Q ss_pred EeCCHHHHHHHHHHHHHhCCCCcEEEEec--ChhhHHHHHHCC--CCeEEcCcHHHHHHHHHHHHhhcCCChHHHHHHHH
Q 003861 612 MYTDKKRTIEAVQRLRLAFPAIPIYARAQ--DMMHLLDLKKAG--ATDAILENAETSLQLGSKLLKGFGVMSDDVTFLRQ 687 (791)
Q Consensus 612 ~~~~d~~n~~~~~~ar~l~p~~~iiara~--~~~~~~~L~~~G--ad~Vi~p~~~~~~~la~~~l~~l~~~~~~~~~l~~ 687 (791)
.+. .+.... .++ +..+.+++.-.. +++..+.++++. +.-++.|+.-.|..+..++++ ....++
T Consensus 61 ft~-p~a~~~---~~~-l~~g~~vVigTTG~s~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~------~aa~~l-- 127 (243)
T 3qy9_A 61 FSN-PNLLFP---LLD-EDFHLPLVVATTGEKEKLLNKLDELSQNMPVFFSANMSYGVHALTKILA------AAVPLL-- 127 (243)
T ss_dssp CSC-HHHHHH---HHT-SCCCCCEEECCCSSHHHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHH------HHHHHT--
T ss_pred eCC-hHHHHH---HHH-HhcCCceEeCCCCCCHHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHH------HHHHhc--
Confidence 443 222222 222 444566665332 344556666552 334889998888877776665 223332
Q ss_pred HHhcccccceeeeecCC
Q 003861 688 LVRNSMEIQAQEVLSQK 704 (791)
Q Consensus 688 ~~~~~~~~~~~e~~~~~ 704 (791)
.+ -+..+.|.-.+.
T Consensus 128 --~~-~dieI~E~HH~~ 141 (243)
T 3qy9_A 128 --DD-FDIELTEAHHNK 141 (243)
T ss_dssp --TT-SEEEEEEEECTT
T ss_pred --CC-CCEEEEEcCCCC
Confidence 22 456666765443
No 422
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=89.79 E-value=0.4 Score=49.62 Aligned_cols=72 Identities=11% Similarity=0.053 Sum_probs=53.7
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hcC--CCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KLG--FPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~~--~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..++.. +.+ ..++.+|.+|++.++++
T Consensus 23 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~ 92 (277)
T 2rhc_B 23 EVALVTGATSGIGLEIARRLG----------KEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAA 92 (277)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHH
Confidence 45777765 789999999998 88999999999988765432 223 56788999999876654
Q ss_pred ---CCCCCcEEEEEe
Q 003861 602 ---GITSPKAVMIMY 613 (791)
Q Consensus 602 ---gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 93 ~~~~~g~iD~lv~~A 107 (277)
T 2rhc_B 93 VVERYGPVDVLVNNA 107 (277)
T ss_dssp HHHHTCSCSEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 124678777654
No 423
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=89.78 E-value=0.34 Score=49.98 Aligned_cols=72 Identities=13% Similarity=0.076 Sum_probs=54.4
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----cC--CCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----LG--FPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~~--~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..+++.+ .+ ...+.+|.+|++.++++
T Consensus 5 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 74 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELG----------VAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQA 74 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCccHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHH
Confidence 46788887 679999999998 899999999999988665532 23 45678999999877654
Q ss_pred ---CCCCCcEEEEEe
Q 003861 602 ---GITSPKAVMIMY 613 (791)
Q Consensus 602 ---gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 75 ~~~~~g~iD~lVnnA 89 (264)
T 3tfo_A 75 AVDTWGRIDVLVNNA 89 (264)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 123677776654
No 424
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=89.78 E-value=0.39 Score=49.22 Aligned_cols=73 Identities=12% Similarity=0.088 Sum_probs=54.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----h----cCCCEEEccCCCHHHHHhc-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----K----LGFPILYGDASRPAVLLSA- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~----~~~~~v~GD~t~~~~L~~a- 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..++.. + .....+.+|.+|++.++++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~ 77 (267)
T 2gdz_A 8 KVALVTGAAQGIGRAFAEALL----------LKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTF 77 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHH
Confidence 45777776 789999999998 88999999999988755432 1 2356788999999877653
Q ss_pred -----CCCCCcEEEEEeC
Q 003861 602 -----GITSPKAVMIMYT 614 (791)
Q Consensus 602 -----gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 78 ~~~~~~~g~id~lv~~Ag 95 (267)
T 2gdz_A 78 RKVVDHFGRLDILVNNAG 95 (267)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 1235787776653
No 425
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=89.76 E-value=0.36 Score=51.29 Aligned_cols=73 Identities=11% Similarity=0.007 Sum_probs=56.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c----CCCEEEccCCCHHHHHhc-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L----GFPILYGDASRPAVLLSA- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~----~~~~v~GD~t~~~~L~~a- 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|++++.+++..+++.+ . ...++.+|.+|++.++++
T Consensus 9 k~vlVTGas~gIG~~la~~l~----------~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~ 78 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLL----------NQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAA 78 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHH
T ss_pred CEEEEcCCchHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHH
Confidence 46778876 789999999998 889999999999988665432 2 466789999999977654
Q ss_pred -----CCCCCcEEEEEeC
Q 003861 602 -----GITSPKAVMIMYT 614 (791)
Q Consensus 602 -----gi~~a~~viv~~~ 614 (791)
.....|.+|-..+
T Consensus 79 ~~~~~~~g~id~lv~nAg 96 (319)
T 3ioy_A 79 DEVEARFGPVSILCNNAG 96 (319)
T ss_dssp HHHHHHTCCEEEEEECCC
T ss_pred HHHHHhCCCCCEEEECCC
Confidence 1246787776654
No 426
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=89.76 E-value=0.42 Score=49.72 Aligned_cols=72 Identities=19% Similarity=0.105 Sum_probs=53.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----c--CCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----L--GFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..++..+ . ....+.+|.+|++..+++=
T Consensus 29 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 98 (283)
T 3v8b_A 29 PVALITGAGSGIGRATALALA----------ADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRD 98 (283)
T ss_dssp CEEEEESCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHH
Confidence 35677776 679999999998 899999999999988766543 2 3557889999997765431
Q ss_pred ----CCCCcEEEEEe
Q 003861 603 ----ITSPKAVMIMY 613 (791)
Q Consensus 603 ----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 99 ~~~~~g~iD~lVnnA 113 (283)
T 3v8b_A 99 LVLKFGHLDIVVANA 113 (283)
T ss_dssp HHHHHSCCCEEEECC
T ss_pred HHHHhCCCCEEEECC
Confidence 13677776544
No 427
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=89.74 E-value=1 Score=40.15 Aligned_cols=97 Identities=13% Similarity=0.127 Sum_probs=62.2
Q ss_pred CCCcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCCC-CcEEEEEeCC-HHHHHHHHHHHHHh-CCCCcE
Q 003861 563 VGWPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGITS-PKAVMIMYTD-KKRTIEAVQRLRLA-FPAIPI 635 (791)
Q Consensus 563 ~g~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~~-a~~viv~~~~-d~~n~~~~~~ar~l-~p~~~i 635 (791)
....++++|.|+...+.+ ++.|+.+...+ +..+.++...-.. .|.+++-..- +......+..+|+. +|++++
T Consensus 6 ~~~~ilivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~~~~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~i 84 (136)
T 3hdv_A 6 ARPLVLVVDDNAVNREALILYLKSRGIDAVGAD-GAEEARLYLHYQKRIGLMITDLRMQPESGLDLIRTIRASERAALSI 84 (136)
T ss_dssp -CCEEEEECSCHHHHHHHHHHHHHTTCCEEEES-SHHHHHHHHHHCTTEEEEEECSCCSSSCHHHHHHHHHTSTTTTCEE
T ss_pred CCCeEEEECCCHHHHHHHHHHHHHcCceEEEeC-CHHHHHHHHHhCCCCcEEEEeccCCCCCHHHHHHHHHhcCCCCCCE
Confidence 456788888888764443 34677766533 3334444433233 7877776543 34567778888887 688887
Q ss_pred EEEecC--hhhHHHHHHCCCCeEEcCc
Q 003861 636 YARAQD--MMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 636 iara~~--~~~~~~L~~~Gad~Vi~p~ 660 (791)
++-..+ .+......+.|++.++.-.
T Consensus 85 i~~s~~~~~~~~~~~~~~g~~~~l~KP 111 (136)
T 3hdv_A 85 IVVSGDTDVEEAVDVMHLGVVDFLLKP 111 (136)
T ss_dssp EEEESSCCHHHHHHHHHTTCSEEEESS
T ss_pred EEEeCCCChHHHHHHHhCCcceEEeCC
Confidence 776654 4456677889999876654
No 428
>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*
Probab=89.72 E-value=0.52 Score=48.78 Aligned_cols=72 Identities=11% Similarity=0.064 Sum_probs=54.6
Q ss_pred CCEEEeCC-Ch--hHHHHHHHhhhhccCCCCCCCCCCcEEEEcCCh--hhHHHHHhc--CCCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQ--MGQVLANLLSAPLASGSDGNTVGWPFVAFDLNP--SVVKESRKL--GFPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~--~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~--~~v~~~~~~--~~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. |. +|+.+++.|. ++|++|++++.++ +..+++.+. ...++.+|.+|++.++++
T Consensus 27 k~vlVTGasg~~GIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~ 96 (280)
T 3nrc_A 27 KKILITGLLSNKSIAYGIAKAMH----------REGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVE 96 (280)
T ss_dssp CEEEECCCCSTTCHHHHHHHHHH----------HTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCCCCCHHHHHHHHHH----------HcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHH
Confidence 45777775 34 9999999998 8999999999988 666666542 467889999999877653
Q ss_pred ---CCCCCcEEEEEe
Q 003861 602 ---GITSPKAVMIMY 613 (791)
Q Consensus 602 ---gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 97 ~~~~~g~id~li~nA 111 (280)
T 3nrc_A 97 LGKVWDGLDAIVHSI 111 (280)
T ss_dssp HHHHCSSCCEEEECC
T ss_pred HHHHcCCCCEEEECC
Confidence 124678777654
No 429
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=89.72 E-value=0.31 Score=49.71 Aligned_cols=72 Identities=15% Similarity=0.239 Sum_probs=49.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhc------
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~a------ 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ ....++.+|.+|++..+++
T Consensus 8 k~~lVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 77 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLA----------QEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQ 77 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHH
Confidence 35777776 678999999998 899999999999887665543 2467889999999876653
Q ss_pred CCCCCcEEEEEe
Q 003861 602 GITSPKAVMIMY 613 (791)
Q Consensus 602 gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 78 ~~g~id~lv~nA 89 (257)
T 3tpc_A 78 EFGHVHGLVNCA 89 (257)
T ss_dssp HHSCCCEEEECC
T ss_pred HcCCCCEEEECC
Confidence 123677776543
No 430
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=89.71 E-value=0.51 Score=40.49 Aligned_cols=94 Identities=13% Similarity=0.145 Sum_probs=60.8
Q ss_pred CcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCCH-HHHHHHHHHHHHhC--CCCcEEE
Q 003861 565 WPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLAF--PAIPIYA 637 (791)
Q Consensus 565 ~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~d-~~n~~~~~~ar~l~--p~~~iia 637 (791)
.+++++|.|+...+.+ ++.|+.+...+ +..+.++...-...|.+++...-+ ......+..+|+.. +++++++
T Consensus 2 ~~iliv~~~~~~~~~l~~~l~~~g~~v~~~~-~~~~~~~~l~~~~~dlii~d~~~~~~~~~~~~~~l~~~~~~~~~~ii~ 80 (119)
T 2j48_A 2 GHILLLEEEDEAATVVCEMLTAAGFKVIWLV-DGSTALDQLDLLQPIVILMAWPPPDQSCLLLLQHLREHQADPHPPLVL 80 (119)
T ss_dssp CEEEEECCCHHHHHHHHHHHHHTTCEEEEES-CHHHHHHHHHHHCCSEEEEECSTTCCTHHHHHHHHHHTCCCSSCCCEE
T ss_pred CEEEEEeCCHHHHHHHHHHHHhCCcEEEEec-CHHHHHHHHHhcCCCEEEEecCCCCCCHHHHHHHHHhccccCCCCEEE
Confidence 3577888887764443 34567665433 334455544445678887776543 34566788888875 7788777
Q ss_pred EecChhhHHHHHHCCCCeEEcCc
Q 003861 638 RAQDMMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 638 ra~~~~~~~~L~~~Gad~Vi~p~ 660 (791)
-....+.. ...+.|++.++...
T Consensus 81 ~~~~~~~~-~~~~~g~~~~l~kp 102 (119)
T 2j48_A 81 FLGEPPVD-PLLTAQASAILSKP 102 (119)
T ss_dssp EESSCCSS-HHHHHHCSEECSSC
T ss_pred EeCCCCch-hhhhcCHHHhccCC
Confidence 76655555 78889999876543
No 431
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=89.69 E-value=0.33 Score=49.41 Aligned_cols=72 Identities=15% Similarity=0.075 Sum_probs=52.8
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcC-ChhhHHHHH----hc--CCCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSVVKESR----KL--GFPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~-d~~~v~~~~----~~--~~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++. +++..+++. +. ...++.+|.+|++.++++=
T Consensus 8 k~vlITGasggiG~~~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 77 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFA----------TEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQ 77 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHH
Confidence 45777765 788999999998 78999999999 777655432 22 3567889999998776541
Q ss_pred -----CCCCcEEEEEe
Q 003861 603 -----ITSPKAVMIMY 613 (791)
Q Consensus 603 -----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 78 ~~~~~~g~id~li~~A 93 (261)
T 1gee_A 78 SAIKEFGKLDVMINNA 93 (261)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 12678777654
No 432
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=89.68 E-value=0.35 Score=49.39 Aligned_cols=73 Identities=18% Similarity=0.069 Sum_probs=53.0
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCC---CcEEEEcCChhhHHHHH---h--cCCCEEEccCCCHHHHHhcC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVG---WPFVAFDLNPSVVKESR---K--LGFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g---~~vvvID~d~~~v~~~~---~--~~~~~v~GD~t~~~~L~~ag 602 (791)
+.++|.|. |.+|+.+++.|. +.| ++|++++.+++..+.++ + ....++.+|.+|++.++++-
T Consensus 22 k~vlITGasggIG~~la~~L~----------~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~ 91 (267)
T 1sny_A 22 NSILITGCNRGLGLGLVKALL----------NLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLV 91 (267)
T ss_dssp SEEEESCCSSHHHHHHHHHHH----------TSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHH
T ss_pred CEEEEECCCCcHHHHHHHHHH----------hcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHH
Confidence 35777765 789999999998 788 99999999987544332 2 24678899999998776541
Q ss_pred --C----C--CCcEEEEEeC
Q 003861 603 --I----T--SPKAVMIMYT 614 (791)
Q Consensus 603 --i----~--~a~~viv~~~ 614 (791)
+ . +.|.+|-..+
T Consensus 92 ~~~~~~~g~~~id~li~~Ag 111 (267)
T 1sny_A 92 ADIEGVTKDQGLNVLFNNAG 111 (267)
T ss_dssp HHHHHHHGGGCCSEEEECCC
T ss_pred HHHHHhcCCCCccEEEECCC
Confidence 1 1 5787776543
No 433
>2dwc_A PH0318, 433AA long hypothetical phosphoribosylglycinamide transferase; purine ribonucleotide biosynthesis; HET: ADP; 1.70A {Pyrococcus horikoshii} PDB: 2czg_A*
Probab=89.67 E-value=0.37 Score=53.31 Aligned_cols=110 Identities=18% Similarity=0.199 Sum_probs=72.3
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhc-CCCCCcEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSA-GITSPKAV 609 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~a-gi~~a~~v 609 (791)
.++++|+|.|..|+.+++.++ +.|++++++|.+++.... ......+..|.+|.+.+.++ .-.++|++
T Consensus 19 ~~~ili~g~g~~g~~~~~a~~----------~~G~~v~~v~~~~~~~~~--~~ad~~~~~~~~d~~~l~~~~~~~~~d~V 86 (433)
T 2dwc_A 19 AQKILLLGSGELGKEIAIEAQ----------RLGVEVVAVDRYANAPAM--QVAHRSYVGNMMDKDFLWSVVEREKPDAI 86 (433)
T ss_dssp CCEEEEESCSHHHHHHHHHHH----------HTTCEEEEEESSTTCHHH--HHSSEEEESCTTCHHHHHHHHHHHCCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEECCCCChhh--hhcceEEECCCCCHHHHHHHHHHcCCCEE
Confidence 457999999999999999998 899999999998875321 22234667888888766653 23478888
Q ss_pred EEEeCCHHHHHHHHHHHHHhC----CCCcEEEEecChhhHHH-H-HHCCCC
Q 003861 610 MIMYTDKKRTIEAVQRLRLAF----PAIPIYARAQDMMHLLD-L-KKAGAT 654 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~----p~~~iiara~~~~~~~~-L-~~~Gad 654 (791)
+...++-.. ..+..+.+.+ |+...+..+.|....+. + ++.|+.
T Consensus 87 ~~~~e~~~~--~~~~~l~~~gi~~~~~~~~~~~~~dK~~~k~~l~~~~gip 135 (433)
T 2dwc_A 87 IPEIEAINL--DALFEFEKDGYFVVPNARATWIAMHRERLRETLVKEAKVP 135 (433)
T ss_dssp EECSSCSCH--HHHHHHHHTTCCBSSCHHHHHHHHCHHHHHHHHHHTSCCC
T ss_pred EECcccCCH--HHHHHHHhcCCeeCCCHHHHHHhhCHHHHHHHHHHhcCCC
Confidence 776654322 2333344432 23334455566665554 4 577875
No 434
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=89.66 E-value=2.1 Score=42.02 Aligned_cols=96 Identities=15% Similarity=0.052 Sum_probs=59.3
Q ss_pred CCEEEeCC--ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhcC
Q 003861 532 EPVVIVGF--GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 532 ~~viI~G~--G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~ag 602 (791)
..++=+|+ |.++..+++.. .+.+++.+|.+++.++.+++ ....++.+|+.+.. +...
T Consensus 43 ~~vLDiGcG~G~~~~~la~~~------------p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~--~~~~ 108 (214)
T 1yzh_A 43 PIHVEVGSGKGAFVSGMAKQN------------PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLT--DYFE 108 (214)
T ss_dssp CEEEEESCTTSHHHHHHHHHC------------TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGG--GTSC
T ss_pred CeEEEEccCcCHHHHHHHHHC------------CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHH--hhcC
Confidence 35666665 45666665543 36789999999999877754 24678899998722 1123
Q ss_pred CCCCcEEEEEeCCHH-----------HHHHHHHHHHHhCCCCcEEEEecC
Q 003861 603 ITSPKAVMIMYTDKK-----------RTIEAVQRLRLAFPAIPIYARAQD 641 (791)
Q Consensus 603 i~~a~~viv~~~~d~-----------~n~~~~~~ar~l~p~~~iiara~~ 641 (791)
-+..|.|++..++.. ..-.+....+-+.|+-.++...++
T Consensus 109 ~~~~D~i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 158 (214)
T 1yzh_A 109 DGEIDRLYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFKTDN 158 (214)
T ss_dssp TTCCSEEEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEEESC
T ss_pred CCCCCEEEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 356898887766521 012333444556776566665544
No 435
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=89.60 E-value=0.36 Score=51.44 Aligned_cols=109 Identities=8% Similarity=-0.011 Sum_probs=67.8
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHh-cCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRK-LGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~-~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
-++.|+|+|.+|+..++.|.+ ..+.+++ +.|.|+++.+.+.+ .+.+..+.|. ++.++ -.+.|+|
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~---------~~~~~~~av~d~~~~~~~~~a~~~~~~~~~~~~--~~ll~---~~~~D~V 71 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRL---------AGNGEVVAVSSRTLESAQAFANKYHLPKAYDKL--EDMLA---DESIDVI 71 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHH---------HCSEEEEEEECSCSSTTCC---CCCCSCEESCH--HHHHT---CTTCCEE
T ss_pred eEEEEEechHHHHHHHHHHHh---------CCCcEEEEEEcCCHHHHHHHHHHcCCCcccCCH--HHHhc---CCCCCEE
Confidence 369999999999999999872 3455655 56999998766544 4554344322 33443 2578999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEE
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAI 657 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi 657 (791)
+++++++. -...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+
T Consensus 72 ~i~tp~~~-h~~~~~~al~aG--k~Vl~EKP~a~~~~e~~~l~~~a~~~~~~~~v 123 (329)
T 3evn_A 72 YVATINQD-HYKVAKAALLAG--KHVLVEKPFTLTYDQANELFALAESCNLFLME 123 (329)
T ss_dssp EECSCGGG-HHHHHHHHHHTT--CEEEEESSCCSSHHHHHHHHHHHHHTTCCEEE
T ss_pred EECCCcHH-HHHHHHHHHHCC--CeEEEccCCcCCHHHHHHHHHHHHHcCCEEEE
Confidence 99998754 344455555554 467763 4455554444 556765544
No 436
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=89.58 E-value=0.48 Score=49.70 Aligned_cols=72 Identities=15% Similarity=0.117 Sum_probs=53.2
Q ss_pred CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhc---
Q 003861 533 PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 533 ~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~a--- 601 (791)
.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ ....++.+|.+|++..+++
T Consensus 43 ~vlVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~ 112 (293)
T 3rih_A 43 SVLVTGGTKGIGRGIATVFA----------RAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAART 112 (293)
T ss_dssp EEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHH
T ss_pred EEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHH
Confidence 5667776 679999999998 899999999999987655432 2356788999999876543
Q ss_pred ---CCCCCcEEEEEeC
Q 003861 602 ---GITSPKAVMIMYT 614 (791)
Q Consensus 602 ---gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 113 ~~~~~g~iD~lvnnAg 128 (293)
T 3rih_A 113 VVDAFGALDVVCANAG 128 (293)
T ss_dssp HHHHHSCCCEEEECCC
T ss_pred HHHHcCCCCEEEECCC
Confidence 1235677766543
No 437
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=89.58 E-value=0.19 Score=53.20 Aligned_cols=73 Identities=21% Similarity=0.221 Sum_probs=54.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhH--HHHHh----cCCCEEEccCCCHHHHHhcCCC
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV--KESRK----LGFPILYGDASRPAVLLSAGIT 604 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v--~~~~~----~~~~~v~GD~t~~~~L~~agi~ 604 (791)
++++|.|. |-+|+.+++.|. +.|++|++++.+++.. +.+++ .+..++.+|.+|++.++++=-+
T Consensus 4 ~~vlVtGatG~iG~~l~~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~ 73 (345)
T 2z1m_A 4 KRALITGIRGQDGAYLAKLLL----------EKGYEVYGADRRSGEFASWRLKELGIENDVKIIHMDLLEFSNIIRTIEK 73 (345)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEECSCCSTTTTHHHHHTTCTTTEEECCCCTTCHHHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHH----------HCCCEEEEEECCCcccccccHhhccccCceeEEECCCCCHHHHHHHHHh
Confidence 36889987 999999999998 7899999999887643 22222 2467788999999887764111
Q ss_pred -CCcEEEEEeC
Q 003861 605 -SPKAVMIMYT 614 (791)
Q Consensus 605 -~a~~viv~~~ 614 (791)
+.|+||-+.+
T Consensus 74 ~~~d~vih~A~ 84 (345)
T 2z1m_A 74 VQPDEVYNLAA 84 (345)
T ss_dssp HCCSEEEECCC
T ss_pred cCCCEEEECCC
Confidence 5688876654
No 438
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=89.58 E-value=0.39 Score=49.09 Aligned_cols=72 Identities=21% Similarity=0.171 Sum_probs=52.4
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcC-ChhhHHHH----HhcC--CCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSVVKES----RKLG--FPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~-d~~~v~~~----~~~~--~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++. +++..++. ++.+ ..++.+|.+|++.++++=
T Consensus 22 k~vlItGasggiG~~la~~l~----------~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~ 91 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELG----------RRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFD 91 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 45777776 789999999998 78999999998 77665443 2223 457889999998876541
Q ss_pred -----CCCCcEEEEEe
Q 003861 603 -----ITSPKAVMIMY 613 (791)
Q Consensus 603 -----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 92 ~~~~~~~~~d~vi~~A 107 (274)
T 1ja9_A 92 KAVSHFGGLDFVMSNS 107 (274)
T ss_dssp HHHHHHSCEEEEECCC
T ss_pred HHHHHcCCCCEEEECC
Confidence 12677776544
No 439
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=89.52 E-value=0.14 Score=54.39 Aligned_cols=73 Identities=23% Similarity=0.245 Sum_probs=53.5
Q ss_pred CCEEEeC-CChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhH-HHHHh-cCCCEEEccCCCHHHHHhcCC-CCCc
Q 003861 532 EPVVIVG-FGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV-KESRK-LGFPILYGDASRPAVLLSAGI-TSPK 607 (791)
Q Consensus 532 ~~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v-~~~~~-~~~~~v~GD~t~~~~L~~agi-~~a~ 607 (791)
.+++|.| .|.+|+.+++.|. +.|++|++++.+++.. +.+.+ .+..++.+|.+|++.++++=- .++|
T Consensus 22 ~~vlVTGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D 91 (333)
T 2q1w_A 22 KKVFITGICGQIGSHIAELLL----------ERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPD 91 (333)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEeCCccHHHHHHHHHHH----------HCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCc
Confidence 3688888 5999999999998 7899999999875432 11222 356789999999998876411 2488
Q ss_pred EEEEEeC
Q 003861 608 AVMIMYT 614 (791)
Q Consensus 608 ~viv~~~ 614 (791)
+||-+..
T Consensus 92 ~vih~A~ 98 (333)
T 2q1w_A 92 AVVHTAA 98 (333)
T ss_dssp EEEECCC
T ss_pred EEEECce
Confidence 8876543
No 440
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=89.51 E-value=0.63 Score=51.03 Aligned_cols=71 Identities=15% Similarity=0.200 Sum_probs=49.6
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCC-CCCcEEEEc---CChhhHHHH-HhcCCCEE--E--c-------c---C-
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNT-VGWPFVAFD---LNPSVVKES-RKLGFPIL--Y--G-------D---A- 592 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~-~g~~vvvID---~d~~~v~~~-~~~~~~~v--~--G-------D---~- 592 (791)
++.|+|.|.+|..++..|. + .|++|+++| .++++++.+ ++.+..+- + | . .
T Consensus 4 kI~ViGaG~~G~~~a~~La----------~~~G~~V~~~~~~~r~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 73 (404)
T 3c7a_A 4 KVCVCGGGNGAHTLSGLAA----------SRDGVEVRVLTLFADEAERWTKALGADELTVIVNEKDGTQTEVKSRPKVIT 73 (404)
T ss_dssp EEEEECCSHHHHHHHHHHT----------TSTTEEEEEECCSTTHHHHHHHHHTTSCEEEEEECSSSCEEEEEECCSEEE
T ss_pred eEEEECCCHHHHHHHHHHH----------hCCCCEEEEEeCCCCcHHHHHHHHhhccceeeeecCCCccceeeccceEEe
Confidence 5899999999999999997 5 599999999 888888874 44332110 0 1 1 1
Q ss_pred CCHHHHHhcCCCCCcEEEEEeCCHH
Q 003861 593 SRPAVLLSAGITSPKAVMIMYTDKK 617 (791)
Q Consensus 593 t~~~~L~~agi~~a~~viv~~~~d~ 617 (791)
+|.+ ++ ++++|.|++++....
T Consensus 74 ~~~~---~a-~~~aD~Vilav~~~~ 94 (404)
T 3c7a_A 74 KDPE---IA-ISGADVVILTVPAFA 94 (404)
T ss_dssp SCHH---HH-HTTCSEEEECSCGGG
T ss_pred CCHH---HH-hCCCCEEEEeCchHH
Confidence 2222 11 357999999998764
No 441
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=89.51 E-value=0.55 Score=47.76 Aligned_cols=72 Identities=10% Similarity=0.050 Sum_probs=53.8
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccC--CCHHHHHhc
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDA--SRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~--t~~~~L~~a 601 (791)
+.++|.|. |-+|+.+++.|. ++|.+|+++|.+++..++..+ ....++.+|. +|++..+++
T Consensus 13 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 82 (252)
T 3f1l_A 13 RIILVTGASDGIGREAAMTYA----------RYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQL 82 (252)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHH
Confidence 45777776 678999999998 899999999999988665432 1567889999 888765543
Q ss_pred ------CCCCCcEEEEEe
Q 003861 602 ------GITSPKAVMIMY 613 (791)
Q Consensus 602 ------gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 83 ~~~~~~~~g~id~lv~nA 100 (252)
T 3f1l_A 83 AQRIAVNYPRLDGVLHNA 100 (252)
T ss_dssp HHHHHHHCSCCSEEEECC
T ss_pred HHHHHHhCCCCCEEEECC
Confidence 223677776554
No 442
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=89.49 E-value=0.16 Score=54.52 Aligned_cols=56 Identities=25% Similarity=0.422 Sum_probs=43.0
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCC
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITS 605 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~ 605 (791)
.|+|+|.|..|..+|..|. +.|++|+++|.+++. +.+..+|++-.+.++++.++..
T Consensus 6 DViIVGaGpaGl~~A~~La----------~~G~~V~v~Er~~~~-------~~~~~~g~~l~~~~l~~l~~~~ 61 (397)
T 3oz2_A 6 DVLVVGGGPGGSTAARYAA----------KYGLKTLMIEKRPEI-------GSPVRCGEGLSKGILNEADIKA 61 (397)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSSST-------TCSCCSCCEEETHHHHHTTCCC
T ss_pred CEEEECcCHHHHHHHHHHH----------HCCCcEEEEeCCCCC-------CCCCceecccCHHHHHHcCCCc
Confidence 4899999999999999998 899999999987653 3333345555566777776653
No 443
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=89.48 E-value=0.53 Score=48.50 Aligned_cols=73 Identities=11% Similarity=0.109 Sum_probs=55.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhcC-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~ag----- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|++.|.+++..+++.+ ....++.+|.+|++..+++-
T Consensus 28 k~vlVTGas~gIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 97 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFH----------AQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAER 97 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHH
Confidence 35667765 679999999998 899999999999998776543 24667889999998776541
Q ss_pred -CCCCcEEEEEeC
Q 003861 603 -ITSPKAVMIMYT 614 (791)
Q Consensus 603 -i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 98 ~~g~iD~lvnnAg 110 (266)
T 3grp_A 98 EMEGIDILVNNAG 110 (266)
T ss_dssp HHTSCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 136777766543
No 444
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=89.39 E-value=0.38 Score=51.95 Aligned_cols=73 Identities=12% Similarity=0.094 Sum_probs=57.9
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCH-HHHHhcCCCCCcEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRP-AVLLSAGITSPKAV 609 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~-~~L~~agi~~a~~v 609 (791)
.++++|.|.|.+|...++.++ ..|.+|+++|.++++.+.+++.|...+. |.+++ +..++.. +.+|.+
T Consensus 180 g~~VlV~GaG~vG~~~~qlak----------~~Ga~Vi~~~~~~~~~~~~~~lGa~~v~-~~~~~~~~~~~~~-~~~D~v 247 (360)
T 1piw_A 180 GKKVGIVGLGGIGSMGTLISK----------AMGAETYVISRSSRKREDAMKMGADHYI-ATLEEGDWGEKYF-DTFDLI 247 (360)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HHTCEEEEEESSSTTHHHHHHHTCSEEE-EGGGTSCHHHHSC-SCEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCEEEEEcCCHHHHHHHHHcCCCEEE-cCcCchHHHHHhh-cCCCEE
Confidence 457999999999999999887 7899999999999999999888876543 44444 4445444 579988
Q ss_pred EEEeCC
Q 003861 610 MIMYTD 615 (791)
Q Consensus 610 iv~~~~ 615 (791)
+-+++.
T Consensus 248 id~~g~ 253 (360)
T 1piw_A 248 VVCASS 253 (360)
T ss_dssp EECCSC
T ss_pred EECCCC
Confidence 888775
No 445
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=89.38 E-value=0.34 Score=49.24 Aligned_cols=73 Identities=15% Similarity=0.162 Sum_probs=55.4
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhcC-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~ag----- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ .....+.+|.+|++..+++=
T Consensus 7 k~vlVTGas~gIG~a~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 76 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLA----------ADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQA 76 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHH
Confidence 45777776 679999999998 899999999999998776543 23567789999998776541
Q ss_pred -CCCCcEEEEEeC
Q 003861 603 -ITSPKAVMIMYT 614 (791)
Q Consensus 603 -i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 77 ~~g~id~lv~nAg 89 (247)
T 3rwb_A 77 LTGGIDILVNNAS 89 (247)
T ss_dssp HHSCCSEEEECCC
T ss_pred HCCCCCEEEECCC
Confidence 136787775544
No 446
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=89.37 E-value=0.51 Score=52.52 Aligned_cols=94 Identities=9% Similarity=-0.056 Sum_probs=60.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCc-EEEEcCChhhHHHHHh-c-C--CCEEEc---------------
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWP-FVAFDLNPSVVKESRK-L-G--FPILYG--------------- 590 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~-vvvID~d~~~v~~~~~-~-~--~~~v~G--------------- 590 (791)
+-+|.|+|+|++|+..++.+.+ ..+.+ +.+.|.|+++.+.+.+ . | ......
T Consensus 23 ~IRVGIIGaG~iG~~~~~~l~~---------~~~veLvAV~D~~~era~~~a~~~yG~~~~~~~~~~~~~i~~a~~~g~~ 93 (446)
T 3upl_A 23 PIRIGLIGAGEMGTDIVTQVAR---------MQGIEVGALSARRLPNTFKAIRTAYGDEENAREATTESAMTRAIEAGKI 93 (446)
T ss_dssp CEEEEEECCSHHHHHHHHHHTT---------SSSEEEEEEECSSTHHHHHHHHHHHSSSTTEEECSSHHHHHHHHHTTCE
T ss_pred ceEEEEECChHHHHHHHHHHhh---------CCCcEEEEEEeCCHHHHHHHHHHhcCCccccccccchhhhhhhhccCCc
Confidence 3479999999999999998862 44555 4566999999877643 2 4 111100
Q ss_pred -cCCCHHHHHhcCCCCCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEE
Q 003861 591 -DASRPAVLLSAGITSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYA 637 (791)
Q Consensus 591 -D~t~~~~L~~agi~~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iia 637 (791)
=.+|.+.+- .-.+.|+|+++|++.+.-...+..|-+.+ .+|+.
T Consensus 94 ~v~~D~eeLL--~d~dIDaVviaTp~p~~H~e~a~~AL~AG--KHVv~ 137 (446)
T 3upl_A 94 AVTDDNDLIL--SNPLIDVIIDATGIPEVGAETGIAAIRNG--KHLVM 137 (446)
T ss_dssp EEESCHHHHH--TCTTCCEEEECSCCHHHHHHHHHHHHHTT--CEEEE
T ss_pred eEECCHHHHh--cCCCCCEEEEcCCChHHHHHHHHHHHHcC--CcEEe
Confidence 013333332 23578999999988655566677777765 35664
No 447
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=89.37 E-value=0.59 Score=49.91 Aligned_cols=74 Identities=20% Similarity=0.326 Sum_probs=57.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHH---HHHhcCCCCCc
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPA---VLLSAGITSPK 607 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~---~L~~agi~~a~ 607 (791)
.++++|.|.|.+|+.+++.++ ..|.+|+++|.++++.+.+++.|...+. |.++++ .++++. ..+|
T Consensus 165 g~~VlV~GaG~vG~~~~~~a~----------~~Ga~Vi~~~~~~~~~~~~~~lGa~~~~-d~~~~~~~~~~~~~~-~~~d 232 (339)
T 1rjw_A 165 GEWVAIYGIGGLGHVAVQYAK----------AMGLNVVAVDIGDEKLELAKELGADLVV-NPLKEDAAKFMKEKV-GGVH 232 (339)
T ss_dssp TCEEEEECCSTTHHHHHHHHH----------HTTCEEEEECSCHHHHHHHHHTTCSEEE-CTTTSCHHHHHHHHH-SSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HcCCEEEEEeCCHHHHHHHHHCCCCEEe-cCCCccHHHHHHHHh-CCCC
Confidence 457999999999999999998 7899999999999999999888876543 555433 333332 5789
Q ss_pred EEEEEeCCH
Q 003861 608 AVMIMYTDK 616 (791)
Q Consensus 608 ~viv~~~~d 616 (791)
.++-+++..
T Consensus 233 ~vid~~g~~ 241 (339)
T 1rjw_A 233 AAVVTAVSK 241 (339)
T ss_dssp EEEESSCCH
T ss_pred EEEECCCCH
Confidence 888887764
No 448
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=89.34 E-value=0.83 Score=49.11 Aligned_cols=74 Identities=19% Similarity=0.316 Sum_probs=57.4
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHHHhcCCCEEEccCC--C-HH----HHHhcC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKLGFPILYGDAS--R-PA----VLLSAG 602 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~~~~~~~~v~GD~t--~-~~----~L~~ag 602 (791)
.+.++|.|.|.+|...++.++ ..|. +|+++|.++++.+.+++.|...+. |.+ | ++ +.+..+
T Consensus 172 g~~VlV~GaG~vG~~aiqlak----------~~Ga~~Vi~~~~~~~~~~~a~~lGa~~vi-~~~~~~~~~~~~~i~~~~~ 240 (356)
T 1pl8_A 172 GHKVLVCGAGPIGMVTLLVAK----------AMGAAQVVVTDLSATRLSKAKEIGADLVL-QISKESPQEIARKVEGQLG 240 (356)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------HTTCSEEEEEESCHHHHHHHHHTTCSEEE-ECSSCCHHHHHHHHHHHHT
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HcCCCEEEEECCCHHHHHHHHHhCCCEEE-cCcccccchHHHHHHHHhC
Confidence 457999999999999999887 7888 899999999999999988876443 443 2 33 233345
Q ss_pred CCCCcEEEEEeCCH
Q 003861 603 ITSPKAVMIMYTDK 616 (791)
Q Consensus 603 i~~a~~viv~~~~d 616 (791)
+.+|.++-+++..
T Consensus 241 -~g~D~vid~~g~~ 253 (356)
T 1pl8_A 241 -CKPEVTIECTGAE 253 (356)
T ss_dssp -SCCSEEEECSCCH
T ss_pred -CCCCEEEECCCCh
Confidence 6799998888764
No 449
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=89.34 E-value=0.56 Score=48.53 Aligned_cols=73 Identities=15% Similarity=0.109 Sum_probs=53.8
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhc--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA-- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~a-- 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ .....+.+|.+|++..+++
T Consensus 28 k~~lVTGas~GIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 97 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFM----------RHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVD 97 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------TTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 45777776 579999999998 899999999999887554321 2356788999999876543
Q ss_pred ----CCCCCcEEEEEeC
Q 003861 602 ----GITSPKAVMIMYT 614 (791)
Q Consensus 602 ----gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 98 ~~~~~~g~id~lv~nAg 114 (277)
T 4fc7_A 98 QALKEFGRIDILINCAA 114 (277)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCc
Confidence 1236787776554
No 450
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=89.31 E-value=0.96 Score=47.49 Aligned_cols=90 Identities=18% Similarity=0.190 Sum_probs=63.1
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCCh------------------hhHHHHH----h--cCC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNP------------------SVVKESR----K--LGF 585 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~------------------~~v~~~~----~--~~~ 585 (791)
+.+|+|+|.|..|..+++.|. ..|. .++++|.|. .+++.++ + .+.
T Consensus 36 ~~~VlVvGaGGlGs~va~~La----------~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v 105 (292)
T 3h8v_A 36 TFAVAIVGVGGVGSVTAEMLT----------RCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDV 105 (292)
T ss_dssp GCEEEEECCSHHHHHHHHHHH----------HHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTS
T ss_pred CCeEEEECcCHHHHHHHHHHH----------HcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCc
Confidence 458999999999999999998 6676 689999887 4444333 2 233
Q ss_pred --CEEEccCCCHHHHHhc-------C---CCCCcEEEEEeCCHHHHHHHHHHHHHhC
Q 003861 586 --PILYGDASRPAVLLSA-------G---ITSPKAVMIMYTDKKRTIEAVQRLRLAF 630 (791)
Q Consensus 586 --~~v~GD~t~~~~L~~a-------g---i~~a~~viv~~~~d~~n~~~~~~ar~l~ 630 (791)
..+..+.++++.+++. . .+++|.||-++++-+.-..+-..+++.+
T Consensus 106 ~v~~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~Dn~~~R~~in~~c~~~~ 162 (292)
T 3h8v_A 106 LFEVHNYNITTVENFQHFMDRISNGGLEEGKPVDLVLSCVDNFEARMTINTACNELG 162 (292)
T ss_dssp EEEEECCCTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred EEEEecccCCcHHHHHHHhhhhcccccccCCCCCEEEECCcchhhhhHHHHHHHHhC
Confidence 3344556655544432 1 2689999888988776667777777775
No 451
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=89.30 E-value=0.44 Score=48.24 Aligned_cols=73 Identities=15% Similarity=0.083 Sum_probs=53.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcC-ChhhHHHHH----hc--CCCEEEccCCCHHHHHhcC-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDL-NPSVVKESR----KL--GFPILYGDASRPAVLLSAG- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~-d~~~v~~~~----~~--~~~~v~GD~t~~~~L~~ag- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++. +++..+++. +. ....+.+|.+|++.++++=
T Consensus 5 k~vlVTGas~giG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 74 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLA----------KQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVK 74 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 35777775 789999999998 88999999998 877655432 22 3557889999998776531
Q ss_pred -----CCCCcEEEEEeC
Q 003861 603 -----ITSPKAVMIMYT 614 (791)
Q Consensus 603 -----i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 75 ~~~~~~g~id~lv~nAg 91 (246)
T 2uvd_A 75 QTVDVFGQVDILVNNAG 91 (246)
T ss_dssp HHHHHHSCCCEEEECCC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 136787776543
No 452
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=89.28 E-value=0.28 Score=54.07 Aligned_cols=70 Identities=21% Similarity=0.309 Sum_probs=51.6
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHH-HHhcCCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKE-SRKLGFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~-~~~~~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
.++++|+|.|.+|+.+++.|. ..|. +|+++|.++++.++ +++.|..++ +..+ +.++ +.++|.
T Consensus 167 g~~VlIiGaG~iG~~~a~~l~----------~~G~~~V~v~~r~~~ra~~la~~~g~~~~--~~~~---l~~~-l~~aDv 230 (404)
T 1gpj_A 167 DKTVLVVGAGEMGKTVAKSLV----------DRGVRAVLVANRTYERAVELARDLGGEAV--RFDE---LVDH-LARSDV 230 (404)
T ss_dssp TCEEEEESCCHHHHHHHHHHH----------HHCCSEEEEECSSHHHHHHHHHHHTCEEC--CGGG---HHHH-HHTCSE
T ss_pred CCEEEEEChHHHHHHHHHHHH----------HCCCCEEEEEeCCHHHHHHHHHHcCCcee--cHHh---HHHH-hcCCCE
Confidence 457999999999999999998 7888 89999999998744 445565432 2222 2221 257999
Q ss_pred EEEEeCCH
Q 003861 609 VMIMYTDK 616 (791)
Q Consensus 609 viv~~~~d 616 (791)
|+.+++..
T Consensus 231 Vi~at~~~ 238 (404)
T 1gpj_A 231 VVSATAAP 238 (404)
T ss_dssp EEECCSSS
T ss_pred EEEccCCC
Confidence 99998764
No 453
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=89.27 E-value=0.24 Score=48.97 Aligned_cols=34 Identities=29% Similarity=0.470 Sum_probs=31.1
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChh
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPS 575 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~ 575 (791)
-.|+|+|.|..|..+|..|. +.|++|+++|.+++
T Consensus 3 ~dV~IIGaGpaGL~aA~~La----------~~G~~V~v~Ek~~~ 36 (336)
T 3kkj_A 3 VPIAIIGTGIAGLSAAQALT----------AAGHQVHLFDKSRG 36 (336)
T ss_dssp CCEEEECCSHHHHHHHHHHH----------HTTCCEEEECSSSS
T ss_pred CCEEEECcCHHHHHHHHHHH----------HCCCCEEEEECCCC
Confidence 35999999999999999998 89999999998764
No 454
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=89.27 E-value=0.47 Score=48.41 Aligned_cols=70 Identities=17% Similarity=0.215 Sum_probs=52.0
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-c-CCCEEEccCCCHHHHHhc------C
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-L-GFPILYGDASRPAVLLSA------G 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-~-~~~~v~GD~t~~~~L~~a------g 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++. ++..+ . . .++.+|.+|++.++++ .
T Consensus 7 k~vlVTGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~ 74 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFA----------REGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYA 74 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHH
Confidence 45777776 788999999998 889999999999877 44432 1 3 7889999999876653 1
Q ss_pred CCCCcEEEEEe
Q 003861 603 ITSPKAVMIMY 613 (791)
Q Consensus 603 i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 75 ~g~iD~lv~~A 85 (256)
T 2d1y_A 75 LGRVDVLVNNA 85 (256)
T ss_dssp HSCCCEEEECC
T ss_pred cCCCCEEEECC
Confidence 23567776554
No 455
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=89.26 E-value=0.31 Score=51.95 Aligned_cols=41 Identities=27% Similarity=0.524 Sum_probs=35.4
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHH
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKES 580 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~ 580 (791)
..++|.|+|.|.+|..+|..+. ..|++|++.|.+++..+++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a----------~~G~~V~l~D~~~~~l~~~ 45 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFA----------SGGFRVKLYDIEPRQITGA 45 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHH----------HTTCCEEEECSCHHHHHHH
T ss_pred CCCeEEEECCcHHHHHHHHHHH----------hCCCeEEEEECCHHHHHHH
Confidence 3567999999999999999998 8999999999999976554
No 456
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=89.24 E-value=0.24 Score=52.30 Aligned_cols=75 Identities=23% Similarity=0.275 Sum_probs=54.2
Q ss_pred CCCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhh-----HHHH-HhcCCCEEEccCCCHHHHHhcC
Q 003861 530 GSEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV-----VKES-RKLGFPILYGDASRPAVLLSAG 602 (791)
Q Consensus 530 ~~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~-----v~~~-~~~~~~~v~GD~t~~~~L~~ag 602 (791)
...+++|.|. |-+|+.+++.|. +.|++|++++.+++. .+.+ ...+..++.+|.+|++.++++=
T Consensus 13 ~~~~vlVTGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~ 82 (335)
T 1rpn_A 13 MTRSALVTGITGQDGAYLAKLLL----------EKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAV 82 (335)
T ss_dssp --CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHH
T ss_pred cCCeEEEECCCChHHHHHHHHHH----------HCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHH
Confidence 3456888876 999999999998 789999999987653 2222 1245778999999998877642
Q ss_pred CC-CCcEEEEEeC
Q 003861 603 IT-SPKAVMIMYT 614 (791)
Q Consensus 603 i~-~a~~viv~~~ 614 (791)
-+ +.|+||-+..
T Consensus 83 ~~~~~d~Vih~A~ 95 (335)
T 1rpn_A 83 IKAQPQEVYNLAA 95 (335)
T ss_dssp HHHCCSEEEECCS
T ss_pred HHcCCCEEEECcc
Confidence 11 5688876543
No 457
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=89.24 E-value=1.2 Score=48.07 Aligned_cols=108 Identities=8% Similarity=0.069 Sum_probs=66.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcE-EEEcCChhhHHHHHh-cCC---CEEEccCCCHHHHHhcCCCCC
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPF-VAFDLNPSVVKESRK-LGF---PILYGDASRPAVLLSAGITSP 606 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~v-vvID~d~~~v~~~~~-~~~---~~v~GD~t~~~~L~~agi~~a 606 (791)
-++.|+|+|.+|+..++.|.+ ..+.++ .+.|.|+++.+.+.+ .+. ...+.| -++.+++ .++
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~---------~~~~~lv~v~d~~~~~~~~~a~~~~~~~~~~~~~~--~~~ll~~---~~~ 72 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHL---------APNATISGVASRSLEKAKAFATANNYPESTKIHGS--YESLLED---PEI 72 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHH---------CTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEESS--HHHHHHC---TTC
T ss_pred eEEEEECchHHHHHHHHHHhh---------CCCcEEEEEEcCCHHHHHHHHHHhCCCCCCeeeCC--HHHHhcC---CCC
Confidence 369999999999999998872 345665 477999998877654 453 233332 2344442 468
Q ss_pred cEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeE
Q 003861 607 KAVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDA 656 (791)
Q Consensus 607 ~~viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~V 656 (791)
|+|+++++++.. ...+..+-+. +.+|++. +.+.+..+.+ ++.|....
T Consensus 73 D~V~i~tp~~~h-~~~~~~al~a--Gk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~~ 126 (362)
T 1ydw_A 73 DALYVPLPTSLH-VEWAIKAAEK--GKHILLEKPVAMNVTEFDKIVDACEANGVQIM 126 (362)
T ss_dssp CEEEECCCGGGH-HHHHHHHHTT--TCEEEECSSCSSSHHHHHHHHHHHHTTTCCEE
T ss_pred CEEEEcCChHHH-HHHHHHHHHC--CCeEEEecCCcCCHHHHHHHHHHHHHcCCEEE
Confidence 999999987543 3344444343 3467763 2344444333 44565544
No 458
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=89.23 E-value=1.3 Score=40.69 Aligned_cols=99 Identities=13% Similarity=0.159 Sum_probs=64.4
Q ss_pred CCCCcEEEEcCChhhHHH----HHhcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCCH-HHHHHHHHHHHHh--CCCCc
Q 003861 562 TVGWPFVAFDLNPSVVKE----SRKLGFPILYGDASRPAVLLSAGITSPKAVMIMYTDK-KRTIEAVQRLRLA--FPAIP 634 (791)
Q Consensus 562 ~~g~~vvvID~d~~~v~~----~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~d-~~n~~~~~~ar~l--~p~~~ 634 (791)
+++.+|.+||.|+...+. +++.|++++.-=.+-.+.++.+.-.+.|.++.-..=+ .+=..++..+|+. .++++
T Consensus 10 ~k~~rILiVDD~~~~r~~l~~~L~~~G~~~v~~a~~g~~al~~~~~~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ip 89 (134)
T 3to5_A 10 NKNMKILIVDDFSTMRRIVKNLLRDLGFNNTQEADDGLTALPMLKKGDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLP 89 (134)
T ss_dssp CTTCCEEEECSCHHHHHHHHHHHHHTTCCCEEEESSHHHHHHHHHHHCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCC
T ss_pred CCCCEEEEEeCCHHHHHHHHHHHHHcCCcEEEEECCHHHHHHHHHhCCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCe
Confidence 567789999999987544 3467886443111224556655556889887765432 3456778888864 46778
Q ss_pred EEEEec--ChhhHHHHHHCCCCeEEcCc
Q 003861 635 IYARAQ--DMMHLLDLKKAGATDAILEN 660 (791)
Q Consensus 635 iiara~--~~~~~~~L~~~Gad~Vi~p~ 660 (791)
||.-.. +.+......++||+..+.-.
T Consensus 90 vI~lTa~~~~~~~~~~~~~Ga~~yl~KP 117 (134)
T 3to5_A 90 VLMITAEAKREQIIEAAQAGVNGYIVKP 117 (134)
T ss_dssp EEEEESSCCHHHHHHHHHTTCCEEEESS
T ss_pred EEEEECCCCHHHHHHHHHCCCCEEEECC
Confidence 666443 45566677899999876543
No 459
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=89.23 E-value=1.7 Score=39.69 Aligned_cols=96 Identities=8% Similarity=0.067 Sum_probs=57.9
Q ss_pred CCcEEEEcCChhhHHHHH----hcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC-HHHHHHHHHHHHHhCCCCcEEEE
Q 003861 564 GWPFVAFDLNPSVVKESR----KLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD-KKRTIEAVQRLRLAFPAIPIYAR 638 (791)
Q Consensus 564 g~~vvvID~d~~~v~~~~----~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~-d~~n~~~~~~ar~l~p~~~iiar 638 (791)
...|++||.|+...+.++ +.|+.+...+ +-.+.++.+.-...|.+++-..- +..-...+..+|+.+|++++|+-
T Consensus 14 ~~~ILivdd~~~~~~~l~~~L~~~g~~v~~~~-~~~~a~~~l~~~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~ 92 (153)
T 3hv2_A 14 RPEILLVDSQEVILQRLQQLLSPLPYTLHFAR-DATQALQLLASREVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILL 92 (153)
T ss_dssp CCEEEEECSCHHHHHHHHHHHTTSSCEEEEES-SHHHHHHHHHHSCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEE
T ss_pred CceEEEECCCHHHHHHHHHHhcccCcEEEEEC-CHHHHHHHHHcCCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEE
Confidence 445666666665543332 3444444321 22334444444567877776543 34557788889999999998876
Q ss_pred ecCh--hhHHHHHHCC-CCeEEcCc
Q 003861 639 AQDM--MHLLDLKKAG-ATDAILEN 660 (791)
Q Consensus 639 a~~~--~~~~~L~~~G-ad~Vi~p~ 660 (791)
.... +......+.| ++..+.-.
T Consensus 93 s~~~~~~~~~~~~~~g~~~~~l~KP 117 (153)
T 3hv2_A 93 TGDPDLKLIAKAINEGEIYRYLSKP 117 (153)
T ss_dssp CCCCCHHHHHHHHHTTCCSEEECSS
T ss_pred ECCCCHHHHHHHHhCCCcceEEeCC
Confidence 6544 4555677888 88776543
No 460
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=89.21 E-value=0.42 Score=51.87 Aligned_cols=69 Identities=12% Similarity=0.154 Sum_probs=53.0
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMIM 612 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~ 612 (791)
+++|+|.|..|+.+++.++ +.|++++++|.+++... .......+..|.+|.+.+.+.- +++|.++..
T Consensus 3 ~Ililg~g~~g~~~~~a~~----------~~G~~v~~~~~~~~~~~--~~~~~~~~~~~~~d~~~l~~~~-~~~d~v~~~ 69 (380)
T 3ax6_A 3 KIGIIGGGQLGKMMTLEAK----------KMGFYVIVLDPTPRSPA--GQVADEQIVAGFFDSERIEDLV-KGSDVTTYD 69 (380)
T ss_dssp EEEEECCSHHHHHHHHHHH----------HTTCEEEEEESSTTCTT--GGGSSEEEECCTTCHHHHHHHH-HTCSEEEES
T ss_pred EEEEECCCHHHHHHHHHHH----------HCCCEEEEEeCCCCCch--hhhCceEEECCCCCHHHHHHHH-hcCCEEEec
Confidence 6899999999999999998 89999999999876421 1222346678899988887755 778877654
Q ss_pred eC
Q 003861 613 YT 614 (791)
Q Consensus 613 ~~ 614 (791)
.+
T Consensus 70 ~e 71 (380)
T 3ax6_A 70 LE 71 (380)
T ss_dssp CS
T ss_pred cc
Confidence 44
No 461
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=89.19 E-value=1.1 Score=39.95 Aligned_cols=97 Identities=11% Similarity=0.044 Sum_probs=62.5
Q ss_pred CCCCcEEEEcCChhhHHHH----HhcCCCEEEccCCCHHHHHhcCCCCCcEEEEEeCC--HHHHHHHHHHHHHhCCCCcE
Q 003861 562 TVGWPFVAFDLNPSVVKES----RKLGFPILYGDASRPAVLLSAGITSPKAVMIMYTD--KKRTIEAVQRLRLAFPAIPI 635 (791)
Q Consensus 562 ~~g~~vvvID~d~~~v~~~----~~~~~~~v~GD~t~~~~L~~agi~~a~~viv~~~~--d~~n~~~~~~ar~l~p~~~i 635 (791)
....+++++|.|+...+.+ ++.|+.++.--.+-.+.++.+.-.+.|.+++-..- +......+..+|+. +++++
T Consensus 7 ~~~~~iLivdd~~~~~~~l~~~L~~~g~~v~~~~~~~~~a~~~~~~~~~dlii~d~~~~~~~~g~~~~~~l~~~-~~~~i 85 (140)
T 3cg0_A 7 DDLPGVLIVEDGRLAAATLRIQLESLGYDVLGVFDNGEEAVRCAPDLRPDIALVDIMLCGALDGVETAARLAAG-CNLPI 85 (140)
T ss_dssp -CCCEEEEECCBHHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHCCSEEEEESSCCSSSCHHHHHHHHHHH-SCCCE
T ss_pred CCCceEEEEECCHHHHHHHHHHHHHCCCeeEEEECCHHHHHHHHHhCCCCEEEEecCCCCCCCHHHHHHHHHhC-CCCCE
Confidence 4456788888888765443 34677765312233445554444568888877653 24556778888888 88887
Q ss_pred EEEecC--hhhHHHHHHCCCCeEEcC
Q 003861 636 YARAQD--MMHLLDLKKAGATDAILE 659 (791)
Q Consensus 636 iara~~--~~~~~~L~~~Gad~Vi~p 659 (791)
++-..+ .+......+.|++.++.-
T Consensus 86 i~ls~~~~~~~~~~~~~~g~~~~l~k 111 (140)
T 3cg0_A 86 IFITSSQDVETFQRAKRVNPFGYLAK 111 (140)
T ss_dssp EEEECCCCHHHHHHHHTTCCSEEEEE
T ss_pred EEEecCCCHHHHHHHHhcCCCEEEeC
Confidence 776654 444556778999987654
No 462
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=89.18 E-value=1.1 Score=48.96 Aligned_cols=109 Identities=17% Similarity=0.167 Sum_probs=71.3
Q ss_pred CEEEeCCC-hhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHH-hcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 533 PVVIVGFG-QMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESR-KLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 533 ~viI~G~G-~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~-~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
++.|+|+| .+|+..++.|.+ ..+.+++ +.|.|+++.+++. +.|.++ +.| -++.|++ .+.|+|
T Consensus 4 rigiiG~G~~~~~~~~~~l~~---------~~~~~l~av~d~~~~~~~~~a~~~g~~~-~~~--~~ell~~---~~vD~V 68 (387)
T 3moi_A 4 RFGICGLGFAGSVLMAPAMRH---------HPDAQIVAACDPNEDVRERFGKEYGIPV-FAT--LAEMMQH---VQMDAV 68 (387)
T ss_dssp EEEEECCSHHHHTTHHHHHHH---------CTTEEEEEEECSCHHHHHHHHHHHTCCE-ESS--HHHHHHH---SCCSEE
T ss_pred EEEEEeCCHHHHHHHHHHHHh---------CCCeEEEEEEeCCHHHHHHHHHHcCCCe-ECC--HHHHHcC---CCCCEE
Confidence 68999999 999999998862 4466665 6799999887765 457763 332 2445554 578999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEcC
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAILE 659 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~p 659 (791)
+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+..
T Consensus 69 ~i~tp~~~H-~~~~~~al~aG--k~Vl~EKP~a~~~~e~~~l~~~a~~~g~~~~v~~ 122 (387)
T 3moi_A 69 YIASPHQFH-CEHVVQASEQG--LHIIVEKPLTLSRDEADRMIEAVERAGVHLVVGT 122 (387)
T ss_dssp EECSCGGGH-HHHHHHHHHTT--CEEEECSCCCSCHHHHHHHHHHHHHHTCCEEECC
T ss_pred EEcCCcHHH-HHHHHHHHHCC--CceeeeCCccCCHHHHHHHHHHHHHhCCeEEEEe
Confidence 999987543 44555555554 467763 4455554444 55576654443
No 463
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=89.17 E-value=2 Score=45.42 Aligned_cols=132 Identities=14% Similarity=0.164 Sum_probs=80.6
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHH----HHh----c--CCCEEEccCCCHHHHHhc
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKE----SRK----L--GFPILYGDASRPAVLLSA 601 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~----~~~----~--~~~~v~GD~t~~~~L~~a 601 (791)
++.|+|.|.+|..++..|. ..+. +++++|.|+++.+. +.+ . ...+... +|.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~----------~~~l~el~L~Di~~~~~~g~~~dl~~~~~~~~~~~~i~~t--~d~~----- 63 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLM----------MRGYDDLLLIARTPGKPQGEALDLAHAAAELGVDIRISGS--NSYE----- 63 (308)
T ss_dssp CEEEECCSHHHHHHHHHHH----------HHTCSCEEEECSSTTHHHHHHHHHHHHHHHHTCCCCEEEE--SCGG-----
T ss_pred CEEEECcCHHHHHHHHHHH----------hCCCCEEEEEcCChhhHHHHHHHHHHhhhhcCCCeEEEEC--CCHH-----
Confidence 4789999999999999886 4455 69999999987543 112 1 2233321 2222
Q ss_pred CCCCCcEEEEEeCC---------H--HHHHH----HHHHHHHhCCCCcEEEEecChhhH--HHHHH-CCC--CeEEcC-c
Q 003861 602 GITSPKAVMIMYTD---------K--KRTIE----AVQRLRLAFPAIPIYARAQDMMHL--LDLKK-AGA--TDAILE-N 660 (791)
Q Consensus 602 gi~~a~~viv~~~~---------d--~~n~~----~~~~ar~l~p~~~iiara~~~~~~--~~L~~-~Ga--d~Vi~p-~ 660 (791)
.+++||.||++.+- | ..|.. ++..+++..|+..++. +.|+.+. ..+++ .|. ++|+-- .
T Consensus 64 a~~~aD~Vi~~ag~~~k~G~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv-~tNPv~~~t~~~~k~~~~p~~rviG~gt 142 (308)
T 2d4a_B 64 DMRGSDIVLVTAGIGRKPGMTREQLLEANANTMADLAEKIKAYAKDAIVVI-TTNPVDAMTYVMYKKTGFPRERVIGFSG 142 (308)
T ss_dssp GGTTCSEEEECCSCCCCSSCCTHHHHHHHHHHHHHHHHHHHHHCTTCEEEE-CCSSHHHHHHHHHHHHCCCGGGEEECCH
T ss_pred HhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHHCCCeEEEE-eCCchHHHHHHHHHhcCCChhhEEEecc
Confidence 36899988888432 1 34444 3455666788877666 4555443 23333 243 367665 4
Q ss_pred HHHHHHHHHHHHhhcCCChHHH
Q 003861 661 AETSLQLGSKLLKGFGVMSDDV 682 (791)
Q Consensus 661 ~~~~~~la~~~l~~l~~~~~~~ 682 (791)
.+-..++-..+-+.+|+++..+
T Consensus 143 ~LD~~R~~~~la~~lgv~~~~v 164 (308)
T 2d4a_B 143 ILDSARMAYYISQKLGVSFKSV 164 (308)
T ss_dssp HHHHHHHHHHHHHHHTSCGGGE
T ss_pred cchHHHHHHHHHHHhCcChhHe
Confidence 4335566666666677776543
No 464
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=89.15 E-value=0.21 Score=52.27 Aligned_cols=112 Identities=11% Similarity=0.045 Sum_probs=66.2
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
.++++|+|.|..|+.++..|. +.|. +|++++.++++.+++.+. .... ..+.+.++ ++++|.|
T Consensus 117 ~k~vlvlGaGg~g~aia~~L~----------~~G~~~v~v~~R~~~~a~~la~~-~~~~-----~~~~~~~~-~~~aDiV 179 (277)
T 3don_A 117 DAYILILGAGGASKGIANELY----------KIVRPTLTVANRTMSRFNNWSLN-INKI-----NLSHAESH-LDEFDII 179 (277)
T ss_dssp GCCEEEECCSHHHHHHHHHHH----------TTCCSCCEEECSCGGGGTTCCSC-CEEE-----CHHHHHHT-GGGCSEE
T ss_pred CCEEEEECCcHHHHHHHHHHH----------HCCCCEEEEEeCCHHHHHHHHHh-cccc-----cHhhHHHH-hcCCCEE
Confidence 357999999999999999998 8898 899999999987766542 2221 22334433 6789988
Q ss_pred EEEeCCHH-HHHHHHHHHHHhCCCCcEEEE-ecChh---hHHHHHHCCCCeEEcCcH
Q 003861 610 MIMYTDKK-RTIEAVQRLRLAFPAIPIYAR-AQDMM---HLLDLKKAGATDAILENA 661 (791)
Q Consensus 610 iv~~~~d~-~n~~~~~~ar~l~p~~~iiar-a~~~~---~~~~L~~~Gad~Vi~p~~ 661 (791)
|-+|+... .+.........+.|+ .++.- +.++. -.+..++.|+. ++.-..
T Consensus 180 InaTp~Gm~~~~~~~l~~~~l~~~-~~V~D~vY~P~~T~ll~~A~~~G~~-~~~Gl~ 234 (277)
T 3don_A 180 INTTPAGMNGNTDSVISLNRLASH-TLVSDIVYNPYKTPILIEAEQRGNP-IYNGLD 234 (277)
T ss_dssp EECCC-------CCSSCCTTCCSS-CEEEESCCSSSSCHHHHHHHHTTCC-EECTHH
T ss_pred EECccCCCCCCCcCCCCHHHcCCC-CEEEEecCCCCCCHHHHHHHHCcCE-EeCCHH
Confidence 87776521 111100111112333 34443 33443 33445777985 455543
No 465
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=89.14 E-value=0.58 Score=48.53 Aligned_cols=72 Identities=15% Similarity=0.108 Sum_probs=54.2
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhc------
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSA------ 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~a------ 601 (791)
+.++|.|. +-+|+.+++.|. ++|++|+++|.+++..+++.+ .....+.+|.+|++..+++
T Consensus 6 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 75 (281)
T 3zv4_A 6 EVALITGGASGLGRALVDRFV----------AEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLA 75 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 35677775 679999999998 899999999999998877654 2456788999998866543
Q ss_pred CCCCCcEEEEEe
Q 003861 602 GITSPKAVMIMY 613 (791)
Q Consensus 602 gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 76 ~~g~iD~lvnnA 87 (281)
T 3zv4_A 76 AFGKIDTLIPNA 87 (281)
T ss_dssp HHSCCCEEECCC
T ss_pred hcCCCCEEEECC
Confidence 123567666554
No 466
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=89.09 E-value=0.36 Score=49.89 Aligned_cols=75 Identities=13% Similarity=0.126 Sum_probs=54.9
Q ss_pred CCC-CEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hc--CCCEEEccCCCHHHHHhc
Q 003861 530 GSE-PVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KL--GFPILYGDASRPAVLLSA 601 (791)
Q Consensus 530 ~~~-~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~--~~~~v~GD~t~~~~L~~a 601 (791)
.++ .++|.|. |-+|+.+++.|. ++|++|+++|.+++..++.. +. ...++.+|.+|++.++++
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~ 93 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLA----------VAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEA 93 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHH----------HTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 444 4666666 679999999998 89999999999998765543 22 355678999999877653
Q ss_pred ------CCCCCcEEEEEeC
Q 003861 602 ------GITSPKAVMIMYT 614 (791)
Q Consensus 602 ------gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 94 ~~~~~~~~g~iD~lv~nAg 112 (271)
T 4ibo_A 94 FARLDEQGIDVDILVNNAG 112 (271)
T ss_dssp HHHHHHHTCCCCEEEECCC
T ss_pred HHHHHHHCCCCCEEEECCC
Confidence 1236787776543
No 467
>1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A*
Probab=89.07 E-value=0.19 Score=53.72 Aligned_cols=73 Identities=25% Similarity=0.282 Sum_probs=55.6
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH-----hcCCCEEEccCCCHHHHHhcCCC-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR-----KLGFPILYGDASRPAVLLSAGIT- 604 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~-----~~~~~~v~GD~t~~~~L~~agi~- 604 (791)
.+++|.|. |.+|+.+++.|. +.|++|++++.+++..+... ..+..++.+|.+|++.++++=-+
T Consensus 10 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~ 79 (357)
T 1rkx_A 10 KRVFVTGHTGFKGGWLSLWLQ----------TMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF 79 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH
T ss_pred CEEEEECCCchHHHHHHHHHH----------hCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc
Confidence 46888884 999999999998 78999999998876533222 23678999999999887764111
Q ss_pred CCcEEEEEeC
Q 003861 605 SPKAVMIMYT 614 (791)
Q Consensus 605 ~a~~viv~~~ 614 (791)
++|+||-+..
T Consensus 80 ~~d~vih~A~ 89 (357)
T 1rkx_A 80 QPEIVFHMAA 89 (357)
T ss_dssp CCSEEEECCS
T ss_pred CCCEEEECCC
Confidence 4788887654
No 468
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=89.04 E-value=0.6 Score=47.41 Aligned_cols=73 Identities=11% Similarity=0.072 Sum_probs=55.1
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh---cCCCEEEccCCCHHHHHhcC-----
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK---LGFPILYGDASRPAVLLSAG----- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~---~~~~~v~GD~t~~~~L~~ag----- 602 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ .....+.+|.+|++..+++=
T Consensus 10 k~~lVTGas~gIG~a~a~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 79 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLA----------ERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITD 79 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHH
Confidence 45777776 678999999998 899999999999988766543 23567889999998776531
Q ss_pred -CCCCcEEEEEeC
Q 003861 603 -ITSPKAVMIMYT 614 (791)
Q Consensus 603 -i~~a~~viv~~~ 614 (791)
..+.|.+|-..+
T Consensus 80 ~~g~iD~lv~nAg 92 (248)
T 3op4_A 80 EFGGVDILVNNAG 92 (248)
T ss_dssp HHCCCSEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 136777766543
No 469
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=89.03 E-value=0.62 Score=46.95 Aligned_cols=73 Identities=10% Similarity=0.062 Sum_probs=53.5
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccC--CCHHHHHhc
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDA--SRPAVLLSA 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~--t~~~~L~~a 601 (791)
+.++|.|. |.+|+.+++.|. ++|++|+++|.+++..++..+ ....++..|. +|++.++++
T Consensus 15 k~vlITGas~gIG~~ia~~l~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~ 84 (247)
T 3i1j_A 15 RVILVTGAARGIGAAAARAYA----------AHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYREL 84 (247)
T ss_dssp CEEEESSTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHH
T ss_pred CEEEEeCCCChHHHHHHHHHH----------HCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHH
Confidence 45777776 789999999998 899999999999988665532 3455777777 888766543
Q ss_pred ------CCCCCcEEEEEeC
Q 003861 602 ------GITSPKAVMIMYT 614 (791)
Q Consensus 602 ------gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 85 ~~~~~~~~g~id~lv~nAg 103 (247)
T 3i1j_A 85 AARVEHEFGRLDGLLHNAS 103 (247)
T ss_dssp HHHHHHHHSCCSEEEECCC
T ss_pred HHHHHHhCCCCCEEEECCc
Confidence 1236777776543
No 470
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=89.01 E-value=1.1 Score=48.23 Aligned_cols=108 Identities=17% Similarity=0.192 Sum_probs=67.1
Q ss_pred CCEEEeCCChhHHH-HHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 532 EPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 532 ~~viI~G~G~~G~~-la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
-++.|+|+|.+|+. .++.+.+ ..+.+++ +.|.|+++.+ ++. +.. .+.|. ++.|++ .+.|+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~---------~~~~~l~av~d~~~~~~~--~~~~~~~-~~~~~--~~ll~~---~~vD~ 70 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMG---------TPGLELAGVSSSDASKVH--ADWPAIP-VVSDP--QMLFND---PSIDL 70 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHT---------STTEEEEEEECSCHHHHH--TTCSSCC-EESCH--HHHHHC---SSCCE
T ss_pred ceEEEECCCHHHHHHHHHHHhh---------CCCcEEEEEECCCHHHHH--hhCCCCc-eECCH--HHHhcC---CCCCE
Confidence 47999999999997 7787761 3467776 6799998876 222 333 23222 334432 57899
Q ss_pred EEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEcC
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAILE 659 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~p 659 (791)
|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+..
T Consensus 71 V~i~tp~~~H-~~~~~~al~aG--khV~~EKPla~~~~e~~~l~~~a~~~g~~~~v~~ 125 (352)
T 3kux_A 71 IVIPTPNDTH-FPLAQSALAAG--KHVVVDKPFTVTLSQANALKEHADDAGLLLSVFH 125 (352)
T ss_dssp EEECSCTTTH-HHHHHHHHHTT--CEEEECSSCCSCHHHHHHHHHHHHHTTCCEEECC
T ss_pred EEEeCChHHH-HHHHHHHHHCC--CcEEEECCCcCCHHHHHHHHHHHHHcCCeEEEEe
Confidence 9999987643 44445555554 467773 3444444443 55677655543
No 471
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=89.01 E-value=0.49 Score=49.08 Aligned_cols=72 Identities=11% Similarity=0.079 Sum_probs=54.0
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hc--CCCEEEccCCCHHHHHhc---
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KL--GFPILYGDASRPAVLLSA--- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~--~~~~v~GD~t~~~~L~~a--- 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|++++.+++..++.. +. ....+.+|.+|++.++++
T Consensus 25 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~ 94 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLA----------ARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAA 94 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHH
Confidence 45777776 678999999998 88999999999998765543 22 356788999999876543
Q ss_pred ---CCCCCcEEEEEe
Q 003861 602 ---GITSPKAVMIMY 613 (791)
Q Consensus 602 ---gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 95 ~~~~~g~id~lv~nA 109 (279)
T 3sju_A 95 AVERFGPIGILVNSA 109 (279)
T ss_dssp HHHHHCSCCEEEECC
T ss_pred HHHHcCCCcEEEECC
Confidence 123667776554
No 472
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=88.98 E-value=0.43 Score=48.67 Aligned_cols=59 Identities=17% Similarity=0.189 Sum_probs=46.0
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCC---CCCcEEEEcCChhhHHHHHhc------C--CCEEEccCCCHHHHH
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNT---VGWPFVAFDLNPSVVKESRKL------G--FPILYGDASRPAVLL 599 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~---~g~~vvvID~d~~~v~~~~~~------~--~~~v~GD~t~~~~L~ 599 (791)
+.++|.|. |.+|+.+++.|. + +|++|+++|.+++..+++.+. + ..++.+|.+|++.++
T Consensus 7 k~~lVTGas~gIG~~ia~~l~----------~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~ 76 (259)
T 1oaa_A 7 AVCVLTGASRGFGRALAPQLA----------RLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQ 76 (259)
T ss_dssp EEEEESSCSSHHHHHHHHHHH----------TTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHH
T ss_pred cEEEEeCCCChHHHHHHHHHH----------HhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHH
Confidence 35677775 689999999998 6 899999999999876654321 2 567889999998766
Q ss_pred h
Q 003861 600 S 600 (791)
Q Consensus 600 ~ 600 (791)
+
T Consensus 77 ~ 77 (259)
T 1oaa_A 77 R 77 (259)
T ss_dssp H
T ss_pred H
Confidence 4
No 473
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=88.88 E-value=0.69 Score=48.42 Aligned_cols=71 Identities=15% Similarity=0.158 Sum_probs=57.8
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCC-HHHHHhcCCCCCcE
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASR-PAVLLSAGITSPKA 608 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~-~~~L~~agi~~a~~ 608 (791)
.++++|.|. |.+|+..++.++ ..|.+|+++|.++++.+.+++.|...+. |.++ ++..++. +.+|.
T Consensus 126 g~~vlV~Ga~G~vG~~~~~~a~----------~~Ga~Vi~~~~~~~~~~~~~~~ga~~~~-~~~~~~~~~~~~--~~~d~ 192 (302)
T 1iz0_A 126 GEKVLVQAAAGALGTAAVQVAR----------AMGLRVLAAASRPEKLALPLALGAEEAA-TYAEVPERAKAW--GGLDL 192 (302)
T ss_dssp TCEEEESSTTBHHHHHHHHHHH----------HTTCEEEEEESSGGGSHHHHHTTCSEEE-EGGGHHHHHHHT--TSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHhcCCCEEE-ECCcchhHHHHh--cCceE
Confidence 457999998 999999999988 7899999999999999888888876543 5565 5655555 67898
Q ss_pred EEEEeCC
Q 003861 609 VMIMYTD 615 (791)
Q Consensus 609 viv~~~~ 615 (791)
++- .+.
T Consensus 193 vid-~g~ 198 (302)
T 1iz0_A 193 VLE-VRG 198 (302)
T ss_dssp EEE-CSC
T ss_pred EEE-CCH
Confidence 887 776
No 474
>3hn7_A UDP-N-acetylmuramate-L-alanine ligase; ATP-binding, nucleotide-binding, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.65A {Psychrobacter arcticus 273-4}
Probab=88.86 E-value=0.66 Score=52.96 Aligned_cols=90 Identities=18% Similarity=0.084 Sum_probs=65.3
Q ss_pred CCCEEEeCCChhHHH-HHHHhhhhccCCCCCCCCCCcEEEEcCCh--hhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCc
Q 003861 531 SEPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFVAFDLNP--SVVKESRKLGFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 531 ~~~viI~G~G~~G~~-la~~L~~~~~~~~~~~~~g~~vvvID~d~--~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
.+++.++|.|..|.. +|+.|. +.|++|.+.|.++ +..+.+++.|..+..|. +++.+ ..++|
T Consensus 19 ~~~i~~iGiGg~Gms~lA~~l~----------~~G~~V~~sD~~~~~~~~~~L~~~gi~~~~G~--~~~~~----~~~~d 82 (524)
T 3hn7_A 19 GMHIHILGICGTFMGSLALLAR----------ALGHTVTGSDANIYPPMSTQLEQAGVTIEEGY--LIAHL----QPAPD 82 (524)
T ss_dssp CCEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEESCCCTTHHHHHHHTTCEEEESC--CGGGG----CSCCS
T ss_pred CCEEEEEEecHhhHHHHHHHHH----------hCCCEEEEECCCCCcHHHHHHHHCCCEEECCC--CHHHc----CCCCC
Confidence 468999999999997 788888 8999999999864 45677888999999883 33333 14689
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEe
Q 003861 608 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYARA 639 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~l~p~~~iiara 639 (791)
.||+...=+.+|-.+ ..||+.+ ++|+-+.
T Consensus 83 ~vV~Spgi~~~~p~l-~~a~~~g--i~v~~~~ 111 (524)
T 3hn7_A 83 LVVVGNAMKRGMDVI-EYMLDTG--LRYTSGP 111 (524)
T ss_dssp EEEECTTCCTTSHHH-HHHHHHT--CCEEEHH
T ss_pred EEEECCCcCCCCHHH-HHHHHCC--CcEEEHH
Confidence 887765444445443 5667764 6777664
No 475
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=88.84 E-value=0.24 Score=55.44 Aligned_cols=71 Identities=17% Similarity=0.220 Sum_probs=49.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCC------CCcEEEEcC-ChhhHHHHHhcCCCEEEccC-CCHHHHHhcCC
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTV------GWPFVAFDL-NPSVVKESRKLGFPILYGDA-SRPAVLLSAGI 603 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~------g~~vvvID~-d~~~v~~~~~~~~~~v~GD~-t~~~~L~~agi 603 (791)
+++.|+|+|.+|..+++.|+ +. |.+|++-+. +++..+.+++.|+.+..+.. +..++.
T Consensus 55 KkIgIIGlGsMG~AmA~nLr----------~s~~~~g~G~~ViVg~r~~sks~e~A~e~G~~v~d~ta~s~aEAa----- 119 (525)
T 3fr7_A 55 KQIGVIGWGSQGPAQAQNLR----------DSLAEAKSDIVVKIGLRKGSKSFDEARAAGFTEESGTLGDIWETV----- 119 (525)
T ss_dssp SEEEEECCTTHHHHHHHHHH----------HHHHHTTCCCEEEEEECTTCSCHHHHHHTTCCTTTTCEEEHHHHH-----
T ss_pred CEEEEEeEhHHHHHHHHHHH----------hcccccCCCCEEEEEeCCchhhHHHHHHCCCEEecCCCCCHHHHH-----
Confidence 47999999999999999998 55 888876544 45566777777765311101 123333
Q ss_pred CCCcEEEEEeCCHH
Q 003861 604 TSPKAVMIMYTDKK 617 (791)
Q Consensus 604 ~~a~~viv~~~~d~ 617 (791)
++||.|++++++..
T Consensus 120 ~~ADVVILaVP~~~ 133 (525)
T 3fr7_A 120 SGSDLVLLLISDAA 133 (525)
T ss_dssp HHCSEEEECSCHHH
T ss_pred hcCCEEEECCChHH
Confidence 56899999998753
No 476
>3aw8_A PURK, phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp; HET: AMP; 2.60A {Thermus thermophilus}
Probab=88.82 E-value=0.54 Score=50.73 Aligned_cols=105 Identities=23% Similarity=0.281 Sum_probs=69.2
Q ss_pred CEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhH-HHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 533 PVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVV-KESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 533 ~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v-~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+++|+|.|+.|+.+++.++ +.|++++++|.+++.. ....+ . +..|..|.+.+.+.- +++|.++.
T Consensus 1 ~iliiG~g~~g~~~~~a~~----------~~G~~v~~~~~~~~~~~~~~a~---~-~~~~~~d~~~l~~~~-~~~d~v~~ 65 (369)
T 3aw8_A 1 MIGILGGGQLGRMLALAGY----------PLGLSFRFLDPSPEACAGQVGE---L-VVGEFLDEGALLRFA-EGLALVTY 65 (369)
T ss_dssp CEEEECCSHHHHHHHHHHT----------TBTCCEEEEESCTTCGGGGTSE---E-EECCTTCHHHHHHHH-TTCSEEEE
T ss_pred CEEEECCCHHHHHHHHHHH----------HcCCEEEEEeCCCCChHHHhhc---e-EecCCCCHHHHHHHH-hCCCEEEE
Confidence 4789999999999999998 8999999999886542 11111 2 578999988887755 78998876
Q ss_pred EeCCHHHHHHHHHHHHHhC---CCCcEEEEecChhhHH-HHHHCCCC
Q 003861 612 MYTDKKRTIEAVQRLRLAF---PAIPIYARAQDMMHLL-DLKKAGAT 654 (791)
Q Consensus 612 ~~~~d~~n~~~~~~ar~l~---p~~~iiara~~~~~~~-~L~~~Gad 654 (791)
..++. +...+..+.+.+ |+...+....|....+ .+++.|+.
T Consensus 66 ~~e~~--~~~~~~~l~~~g~~g~~~~~~~~~~dK~~~k~~l~~~gip 110 (369)
T 3aw8_A 66 EFENV--PVEAARRLEGRLPLYPPAKALEVAQDRLREKTFFQGLGVP 110 (369)
T ss_dssp CCTTC--CHHHHHHHHHHSCBSSCHHHHHHHTCHHHHHHHHHHHTCC
T ss_pred CCCCc--CHHHHHHHHHcCCcCCCHHHHHHhcCHHHHHHHHHHCCCC
Confidence 55442 233333444432 3333444555554444 45777765
No 477
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=88.81 E-value=0.22 Score=53.62 Aligned_cols=79 Identities=18% Similarity=0.243 Sum_probs=50.6
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEEE
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVMI 611 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~viv 611 (791)
+.+.|+|+|++|+.+|+.|+ ..|.+|++.|.+++. ..+.+.. +. +-++.+ +++|.|++
T Consensus 149 ktvgIiGlG~IG~~vA~~l~----------~~G~~V~~~d~~~~~---~~~~~~~--~~--~l~ell-----~~aDvV~l 206 (343)
T 2yq5_A 149 LTVGLIGVGHIGSAVAEIFS----------AMGAKVIAYDVAYNP---EFEPFLT--YT--DFDTVL-----KEADIVSL 206 (343)
T ss_dssp SEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCCG---GGTTTCE--EC--CHHHHH-----HHCSEEEE
T ss_pred CeEEEEecCHHHHHHHHHHh----------hCCCEEEEECCChhh---hhhcccc--cc--CHHHHH-----hcCCEEEE
Confidence 47999999999999999998 889999999998764 1112211 11 222333 46788888
Q ss_pred EeCCHHH--HHHHHHHHHHhCCC
Q 003861 612 MYTDKKR--TIEAVQRLRLAFPA 632 (791)
Q Consensus 612 ~~~~d~~--n~~~~~~ar~l~p~ 632 (791)
+++..++ ++.-...++.+.|+
T Consensus 207 ~~Plt~~t~~li~~~~l~~mk~g 229 (343)
T 2yq5_A 207 HTPLFPSTENMIGEKQLKEMKKS 229 (343)
T ss_dssp CCCCCTTTTTCBCHHHHHHSCTT
T ss_pred cCCCCHHHHHHhhHHHHhhCCCC
Confidence 7775322 22223344445554
No 478
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=88.72 E-value=0.7 Score=49.07 Aligned_cols=94 Identities=15% Similarity=0.165 Sum_probs=61.3
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCc-EEEEcCChhh-HHH-HHhcCCCEEEccCCC-HHHHHhcCCCCCc
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWP-FVAFDLNPSV-VKE-SRKLGFPILYGDASR-PAVLLSAGITSPK 607 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~-vvvID~d~~~-v~~-~~~~~~~~v~GD~t~-~~~L~~agi~~a~ 607 (791)
-++.|+|+|.+|+.+++.|.+. ..+.+ +.+.|.|+++ .+. +++.|..... ++ ++.++..+-++.|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~--------~~~~elvav~d~~~~~~~~~~a~~~g~~~~~---~~~e~ll~~~~~~~iD 73 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRN--------AKYLEMGAMVGIDAASDGLARAQRMGVTTTY---AGVEGLIKLPEFADID 73 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHH--------CSSEEEEEEECSCTTCHHHHHHHHTTCCEES---SHHHHHHHSGGGGGEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhh--------CcCeEEEEEEeCChhhhHHHHHHHcCCCccc---CCHHHHHhccCCCCCc
Confidence 3699999999999999999510 23444 4567999887 333 4456655332 23 3345544457899
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCcEEE
Q 003861 608 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYA 637 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~l~p~~~iia 637 (791)
+|+.+++. +.....+..+.+..++.+|+.
T Consensus 74 vV~~atp~-~~h~~~a~~al~a~~Gk~Vi~ 102 (312)
T 1nvm_B 74 FVFDATSA-SAHVQNEALLRQAKPGIRLID 102 (312)
T ss_dssp EEEECSCH-HHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEECCCh-HHHHHHHHHHHHhCCCCEEEE
Confidence 99999994 556666666666633345665
No 479
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=88.69 E-value=0.56 Score=48.01 Aligned_cols=72 Identities=14% Similarity=0.159 Sum_probs=53.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEE-cCChhhHHHHHh----c--CCCEEEccCCCHHHHHhc--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAF-DLNPSVVKESRK----L--GFPILYGDASRPAVLLSA-- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvI-D~d~~~v~~~~~----~--~~~~v~GD~t~~~~L~~a-- 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|++. +.+++..++..+ . ...++.+|.+|++.++++
T Consensus 5 k~vlVTGas~gIG~aia~~l~----------~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 74 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLA----------ENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQ 74 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEecCCchHHHHHHHHHH----------HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 46777776 679999999998 899999997 888877655432 2 356788999999877653
Q ss_pred C----CCCCcEEEEEe
Q 003861 602 G----ITSPKAVMIMY 613 (791)
Q Consensus 602 g----i~~a~~viv~~ 613 (791)
. ..+.|.+|-..
T Consensus 75 ~~~~~~g~id~lv~nA 90 (258)
T 3oid_A 75 QIDETFGRLDVFVNNA 90 (258)
T ss_dssp HHHHHHSCCCEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 1 13568777655
No 480
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=88.69 E-value=0.61 Score=47.91 Aligned_cols=73 Identities=11% Similarity=0.066 Sum_probs=54.8
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hc----CCCEEEccCCCHHHHHhc-
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KL----GFPILYGDASRPAVLLSA- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~----~~~~v~GD~t~~~~L~~a- 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++.. +. ....+.+|.+|++.++++
T Consensus 11 k~~lVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~ 80 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLV----------AEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVI 80 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHH----------HTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHH
Confidence 35777776 679999999998 89999999999998765443 22 245678999999877654
Q ss_pred -CCCCCcEEEEEeC
Q 003861 602 -GITSPKAVMIMYT 614 (791)
Q Consensus 602 -gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 81 ~~~g~id~lv~nAg 94 (267)
T 3t4x_A 81 EKYPKVDILINNLG 94 (267)
T ss_dssp HHCCCCSEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 3457788776553
No 481
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=88.66 E-value=0.55 Score=51.19 Aligned_cols=112 Identities=14% Similarity=0.197 Sum_probs=69.6
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHH-hcCCCEEEccCCCHHHHHhcCCCCCc
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESR-KLGFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~-~~~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
.+-+|.|||.| +|+.-++.+.+ ...+.+++ +.|.|+++.+++. +.|+++ +.|. +-| +++.|
T Consensus 6 ~~~rv~VvG~G-~g~~h~~a~~~--------~~~~~elvav~~~~~~~a~~~a~~~gv~~-~~~~---~~l----~~~~D 68 (372)
T 4gmf_A 6 PKQRVLIVGAK-FGEMYLNAFMQ--------PPEGLELVGLLAQGSARSRELAHAFGIPL-YTSP---EQI----TGMPD 68 (372)
T ss_dssp -CEEEEEECST-TTHHHHHTTSS--------CCTTEEEEEEECCSSHHHHHHHHHTTCCE-ESSG---GGC----CSCCS
T ss_pred CCCEEEEEehH-HHHHHHHHHHh--------CCCCeEEEEEECCCHHHHHHHHHHhCCCE-ECCH---HHH----hcCCC
Confidence 35579999999 89988887751 02356666 6699999987764 578874 4443 333 25689
Q ss_pred EEEEEeCCHHH---HHHHHHHHHHhCCCCcEEEEec-ChhhHHH----HHHCCCCeEEcCc
Q 003861 608 AVMIMYTDKKR---TIEAVQRLRLAFPAIPIYARAQ-DMMHLLD----LKKAGATDAILEN 660 (791)
Q Consensus 608 ~viv~~~~d~~---n~~~~~~ar~l~p~~~iiara~-~~~~~~~----L~~~Gad~Vi~p~ 660 (791)
++++++++... -..++..+-+.+ .+|++.-. +.+..+. -++.|+-..+...
T Consensus 69 ~v~i~~p~~~h~~~~~~~a~~al~aG--khVl~EKPl~~~ea~~l~~~A~~~g~~~~v~~~ 127 (372)
T 4gmf_A 69 IACIVVRSTVAGGAGTQLARHFLARG--VHVIQEHPLHPDDISSLQTLAQEQGCCYWINTF 127 (372)
T ss_dssp EEEECCC--CTTSHHHHHHHHHHHTT--CEEEEESCCCHHHHHHHHHHHHHHTCCEEEECS
T ss_pred EEEEECCCcccchhHHHHHHHHHHcC--CcEEEecCCCHHHHHHHHHHHHHcCCEEEEcCc
Confidence 99999887532 255666666654 45655321 2333333 3667888777543
No 482
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=88.66 E-value=0.14 Score=54.57 Aligned_cols=35 Identities=26% Similarity=0.384 Sum_probs=31.6
Q ss_pred CCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhh
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV 576 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~ 576 (791)
+++.|+|+|++|+.+++.|+ ..|.+|++.|.+++.
T Consensus 145 ~~vgIIG~G~IG~~~A~~l~----------~~G~~V~~~d~~~~~ 179 (311)
T 2cuk_A 145 LTLGLVGMGRIGQAVAKRAL----------AFGMRVVYHARTPKP 179 (311)
T ss_dssp CEEEEECCSHHHHHHHHHHH----------HTTCEEEEECSSCCS
T ss_pred CEEEEEEECHHHHHHHHHHH----------HCCCEEEEECCCCcc
Confidence 46999999999999999998 789999999988764
No 483
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=88.65 E-value=0.44 Score=48.97 Aligned_cols=73 Identities=14% Similarity=0.138 Sum_probs=54.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhc--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSA-- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~a-- 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+ ....++.+|.+|++..+++
T Consensus 21 k~vlVTGas~gIG~aia~~l~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~ 90 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFA----------AAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELAR 90 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHH
Confidence 35677776 679999999998 899999999999987655432 2466788999999876543
Q ss_pred ----CCCCCcEEEEEeC
Q 003861 602 ----GITSPKAVMIMYT 614 (791)
Q Consensus 602 ----gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 91 ~~~~~~g~id~lv~nAg 107 (266)
T 4egf_A 91 RAAEAFGGLDVLVNNAG 107 (266)
T ss_dssp HHHHHHTSCSEEEEECC
T ss_pred HHHHHcCCCCEEEECCC
Confidence 1236787776543
No 484
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=88.64 E-value=0.39 Score=49.95 Aligned_cols=72 Identities=15% Similarity=0.191 Sum_probs=53.3
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhc------C-CCEEEccCCCHHHHHhc--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKL------G-FPILYGDASRPAVLLSA-- 601 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~------~-~~~v~GD~t~~~~L~~a-- 601 (791)
+.++|.|. |-+|+.+++.|. ++|++|+++|.+++..++..+. . ..++.+|.+|++.++++
T Consensus 34 k~~lVTGas~GIG~aia~~la----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 103 (281)
T 4dry_A 34 RIALVTGGGTGVGRGIAQALS----------AEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFA 103 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHH
T ss_pred CEEEEeCCCCHHHHHHHHHHH----------HCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHH
Confidence 35777775 679999999998 8899999999999876654321 1 36789999999876653
Q ss_pred ----CCCCCcEEEEEe
Q 003861 602 ----GITSPKAVMIMY 613 (791)
Q Consensus 602 ----gi~~a~~viv~~ 613 (791)
...+.|.+|-..
T Consensus 104 ~~~~~~g~iD~lvnnA 119 (281)
T 4dry_A 104 AVRAEFARLDLLVNNA 119 (281)
T ss_dssp HHHHHHSCCSEEEECC
T ss_pred HHHHHcCCCCEEEECC
Confidence 113567776554
No 485
>1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A*
Probab=88.64 E-value=0.18 Score=54.48 Aligned_cols=73 Identities=19% Similarity=0.199 Sum_probs=54.0
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhh-----HHHHHh------c-CCCEEEccCCCHHHH
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSV-----VKESRK------L-GFPILYGDASRPAVL 598 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~-----v~~~~~------~-~~~~v~GD~t~~~~L 598 (791)
+.++|.|. |-+|+.+++.|. +.|++|++++.+++. .+.+.+ . +..++.+|.+|++.+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~----------~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 98 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLL----------GKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSL 98 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------HTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHH
T ss_pred CeEEEEcCCchHHHHHHHHHH----------HCCCEEEEEecCCccccchhhhhhhhccccccccceEEEECCCCCHHHH
Confidence 57999997 999999999998 789999999987654 222211 1 567889999999887
Q ss_pred HhcCCC-CCcEEEEEeC
Q 003861 599 LSAGIT-SPKAVMIMYT 614 (791)
Q Consensus 599 ~~agi~-~a~~viv~~~ 614 (791)
+++=-+ +.|+||-+..
T Consensus 99 ~~~~~~~~~d~Vih~A~ 115 (381)
T 1n7h_A 99 RRWIDVIKPDEVYNLAA 115 (381)
T ss_dssp HHHHHHHCCSEEEECCS
T ss_pred HHHHHhcCCCEEEECCc
Confidence 764111 5688876654
No 486
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=88.63 E-value=1.2 Score=47.62 Aligned_cols=75 Identities=12% Similarity=0.174 Sum_probs=57.5
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHHHhcCCCEEEccCCCHH---HHHh-cCCCC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKLGFPILYGDASRPA---VLLS-AGITS 605 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~---~L~~-agi~~ 605 (791)
.++++|.|.|.+|+..++.++ ..|. +|+++|.++++.+.+++.|...+. |.++++ .+++ .+=..
T Consensus 168 g~~VlV~GaG~vG~~~~q~a~----------~~Ga~~Vi~~~~~~~~~~~~~~~Ga~~~~-~~~~~~~~~~v~~~~~g~g 236 (348)
T 2d8a_A 168 GKSVLITGAGPLGLLGIAVAK----------ASGAYPVIVSEPSDFRRELAKKVGADYVI-NPFEEDVVKEVMDITDGNG 236 (348)
T ss_dssp TCCEEEECCSHHHHHHHHHHH----------HTTCCSEEEECSCHHHHHHHHHHTCSEEE-CTTTSCHHHHHHHHTTTSC
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HcCCCEEEEECCCHHHHHHHHHhCCCEEE-CCCCcCHHHHHHHHcCCCC
Confidence 357999999999999999998 7898 999999999999999888876543 444433 2333 23346
Q ss_pred CcEEEEEeCCH
Q 003861 606 PKAVMIMYTDK 616 (791)
Q Consensus 606 a~~viv~~~~d 616 (791)
+|.++-+++..
T Consensus 237 ~D~vid~~g~~ 247 (348)
T 2d8a_A 237 VDVFLEFSGAP 247 (348)
T ss_dssp EEEEEECSCCH
T ss_pred CCEEEECCCCH
Confidence 89888888763
No 487
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=88.49 E-value=0.45 Score=49.56 Aligned_cols=74 Identities=16% Similarity=0.057 Sum_probs=54.2
Q ss_pred CCCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----hc---CCCEEEccCCCH-HHHHhc
Q 003861 531 SEPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----KL---GFPILYGDASRP-AVLLSA 601 (791)
Q Consensus 531 ~~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~~---~~~~v~GD~t~~-~~L~~a 601 (791)
.+.++|.|. |-+|+.+++.|. ++|++|++++.+++..++.. +. ...++.+|.+|+ +..+++
T Consensus 12 ~k~vlITGas~GIG~~~a~~L~----------~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~ 81 (311)
T 3o26_A 12 RRCAVVTGGNKGIGFEICKQLS----------SNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSL 81 (311)
T ss_dssp CCEEEESSCSSHHHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHH
T ss_pred CcEEEEecCCchHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHH
Confidence 346788886 679999999998 88999999999998755443 22 356788999997 544432
Q ss_pred ------CCCCCcEEEEEeC
Q 003861 602 ------GITSPKAVMIMYT 614 (791)
Q Consensus 602 ------gi~~a~~viv~~~ 614 (791)
...+.|.+|-..+
T Consensus 82 ~~~~~~~~g~iD~lv~nAg 100 (311)
T 3o26_A 82 ADFIKTHFGKLDILVNNAG 100 (311)
T ss_dssp HHHHHHHHSSCCEEEECCC
T ss_pred HHHHHHhCCCCCEEEECCc
Confidence 1246787776654
No 488
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=88.45 E-value=0.39 Score=54.91 Aligned_cols=66 Identities=24% Similarity=0.400 Sum_probs=49.0
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEEE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAVM 610 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~vi 610 (791)
.+++.|+|+|++|+.+|+.|+ ..|.+|++.|.+++. +.+.+.|... .+-++.+ +++|.++
T Consensus 142 g~~vgIIG~G~IG~~vA~~l~----------~~G~~V~~~d~~~~~-~~a~~~g~~~----~~l~e~~-----~~aDvV~ 201 (529)
T 1ygy_A 142 GKTVGVVGLGRIGQLVAQRIA----------AFGAYVVAYDPYVSP-ARAAQLGIEL----LSLDDLL-----ARADFIS 201 (529)
T ss_dssp TCEEEEECCSHHHHHHHHHHH----------TTTCEEEEECTTSCH-HHHHHHTCEE----CCHHHHH-----HHCSEEE
T ss_pred CCEEEEEeeCHHHHHHHHHHH----------hCCCEEEEECCCCCh-hHHHhcCcEE----cCHHHHH-----hcCCEEE
Confidence 347999999999999999998 889999999988753 4455556543 1223344 3578888
Q ss_pred EEeCCH
Q 003861 611 IMYTDK 616 (791)
Q Consensus 611 v~~~~d 616 (791)
++++.+
T Consensus 202 l~~P~~ 207 (529)
T 1ygy_A 202 VHLPKT 207 (529)
T ss_dssp ECCCCS
T ss_pred ECCCCc
Confidence 888765
No 489
>2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A
Probab=88.41 E-value=0.23 Score=52.04 Aligned_cols=65 Identities=11% Similarity=0.163 Sum_probs=36.1
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCC-CCcEE
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGIT-SPKAV 609 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~-~a~~v 609 (791)
++++|.|. |.+|+.+++.|. +.|++|++++.+++. .+ ++.+|.+|++.++++=-+ ++|+|
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~----------~~g~~V~~~~r~~~~------~~--~~~~Dl~d~~~~~~~~~~~~~d~v 64 (315)
T 2ydy_A 3 RRVLVTGATGLLGRAVHKEFQ----------QNNWHAVGCGFRRAR------PK--FEQVNLLDSNAVHHIIHDFQPHVI 64 (315)
T ss_dssp CEEEEETTTSHHHHHHHHHHH----------TTTCEEEEEC--------------------------CHHHHHHHCCSEE
T ss_pred CeEEEECCCcHHHHHHHHHHH----------hCCCeEEEEccCCCC------CC--eEEecCCCHHHHHHHHHhhCCCEE
Confidence 46889987 999999999998 789999999976654 12 788999998876654111 57877
Q ss_pred EEEeC
Q 003861 610 MIMYT 614 (791)
Q Consensus 610 iv~~~ 614 (791)
|-+.+
T Consensus 65 ih~A~ 69 (315)
T 2ydy_A 65 VHCAA 69 (315)
T ss_dssp EECC-
T ss_pred EECCc
Confidence 76543
No 490
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=88.38 E-value=1.2 Score=52.90 Aligned_cols=40 Identities=23% Similarity=0.376 Sum_probs=36.1
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHH
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKES 580 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~ 580 (791)
-++|.|+|.|.+|..+|..|. +.|++|++.|.|++.++..
T Consensus 314 i~kV~VIGaG~MG~~iA~~la----------~aG~~V~l~D~~~~~~~~~ 353 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSA----------SKGTPILMKDINEHGIEQG 353 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHH----------HTTCCEEEECSSHHHHHHH
T ss_pred CCEEEEECCChhhHHHHHHHH----------hCCCEEEEEECCHHHHHHH
Confidence 347999999999999999998 7899999999999987764
No 491
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=88.38 E-value=2.3 Score=41.29 Aligned_cols=97 Identities=15% Similarity=0.004 Sum_probs=58.6
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh-------cCCCEEEccCCCHHHHHhcCC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK-------LGFPILYGDASRPAVLLSAGI 603 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~-------~~~~~v~GD~t~~~~L~~agi 603 (791)
..+++-+|+|. |......... ..+.+|+.+|.+++.++.+++ ....++.+|..+. +. ..
T Consensus 41 ~~~vLDiG~G~-G~~~~~la~~---------~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~--~~--~~ 106 (204)
T 3e05_A 41 DLVMWDIGAGS-ASVSIEASNL---------MPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEG--LD--DL 106 (204)
T ss_dssp TCEEEEETCTT-CHHHHHHHHH---------CTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTT--CT--TS
T ss_pred CCEEEEECCCC-CHHHHHHHHH---------CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhh--hh--cC
Confidence 45788888874 4433333320 124789999999999887764 2467888998643 21 22
Q ss_pred CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEecC
Q 003861 604 TSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARAQD 641 (791)
Q Consensus 604 ~~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara~~ 641 (791)
+.+|.+++..........+-...+.+.|+-.++.....
T Consensus 107 ~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 107 PDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp CCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred CCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 57898876654332223334445556777666654433
No 492
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=88.34 E-value=1.7 Score=40.90 Aligned_cols=95 Identities=17% Similarity=0.115 Sum_probs=56.4
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHh----cCCC---EEEccCCCHHHHHhcCC
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRK----LGFP---ILYGDASRPAVLLSAGI 603 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~----~~~~---~v~GD~t~~~~L~~agi 603 (791)
..+++-+|+|. |........ ...+.+|+.+|.+++.++.+++ .+.. .+.+|..+ .+....
T Consensus 26 ~~~vldiG~G~-G~~~~~l~~---------~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~--~~~~~~- 92 (178)
T 3hm2_A 26 HETLWDIGGGS-GSIAIEWLR---------STPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPR--AFDDVP- 92 (178)
T ss_dssp TEEEEEESTTT-THHHHHHHT---------TSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTG--GGGGCC-
T ss_pred CCeEEEeCCCC-CHHHHHHHH---------HCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHh--hhhccC-
Confidence 44789999986 655544443 0237889999999999887764 2333 67777754 444321
Q ss_pred CCCcEEEEEeCCHHHHHHHHHHHHHhCCCCcEEEEe
Q 003861 604 TSPKAVMIMYTDKKRTIEAVQRLRLAFPAIPIYARA 639 (791)
Q Consensus 604 ~~a~~viv~~~~d~~n~~~~~~ar~l~p~~~iiara 639 (791)
+.+|.|++...-.. ...+-...+.+.|+-.++...
T Consensus 93 ~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~ 127 (178)
T 3hm2_A 93 DNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANA 127 (178)
T ss_dssp SCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEE
T ss_pred CCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEe
Confidence 67998876543322 112233334456665555543
No 493
>1kjq_A GART 2, phosphoribosylglycinamide formyltransferase 2, 5'-; ATP-grAsp, purine biosynthesis, nucleotide; HET: ADP MPO; 1.05A {Escherichia coli} SCOP: b.84.2.1 c.30.1.1 d.142.1.2 PDB: 1kj9_A* 1kji_A* 1kjj_A* 1kj8_A* 1eyz_A* 1ez1_A*
Probab=88.28 E-value=0.62 Score=50.57 Aligned_cols=111 Identities=12% Similarity=0.102 Sum_probs=69.1
Q ss_pred CCCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHHHHHhc-CCCCCcE
Q 003861 530 GSEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPAVLLSA-GITSPKA 608 (791)
Q Consensus 530 ~~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~a-gi~~a~~ 608 (791)
.+++++|+|.|..|+.+++.++ +.|++++++|.+++.. ........+..|..|++.+.++ .-.++|+
T Consensus 10 ~~~~ili~g~g~~~~~~~~a~~----------~~G~~v~~~~~~~~~~--~~~~~d~~~~~~~~d~~~l~~~~~~~~~d~ 77 (391)
T 1kjq_A 10 AATRVMLLGSGELGKEVAIECQ----------RLGVEVIAVDRYADAP--AMHVAHRSHVINMLDGDALRRVVELEKPHY 77 (391)
T ss_dssp TCCEEEEESCSHHHHHHHHHHH----------TTTCEEEEEESSTTCG--GGGGSSEEEECCTTCHHHHHHHHHHHCCSE
T ss_pred CCCEEEEECCCHHHHHHHHHHH----------HcCCEEEEEECCCCCc--hhhhccceEECCCCCHHHHHHHHHHcCCCE
Confidence 3468999999999999999998 8999999999987652 1122234567788887766553 2346887
Q ss_pred EEEEeCCHHHHHHHHHHHHHhC----CCCcEEEEecChhhHHHH--HHCCCC
Q 003861 609 VMIMYTDKKRTIEAVQRLRLAF----PAIPIYARAQDMMHLLDL--KKAGAT 654 (791)
Q Consensus 609 viv~~~~d~~n~~~~~~ar~l~----p~~~iiara~~~~~~~~L--~~~Gad 654 (791)
++...++-..+ .+..+.+.+ |+...+....|....+.+ ++.|+.
T Consensus 78 v~~~~e~~~~~--~~~~l~~~gi~~~~~~~~~~~~~dK~~~~~~l~~~~gip 127 (391)
T 1kjq_A 78 IVPEIEAIATD--MLIQLEEEGLNVVPCARATKLTMNREGIRRLAAEELQLP 127 (391)
T ss_dssp EEECSSCSCHH--HHHHHHHTTCEESSCHHHHHHHHSHHHHHHHHHTTSCCC
T ss_pred EEECCCcCCHH--HHHHHHhCCCCcCCCHHHHHHhhCHHHHHHHHHHhCCCC
Confidence 77665542222 233333332 222233344455544444 467764
No 494
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=88.27 E-value=0.96 Score=49.65 Aligned_cols=116 Identities=17% Similarity=0.176 Sum_probs=72.5
Q ss_pred CCEEEeCCChhHHHHHHHhhhhc--cCCCCCCCCCCcEE-EEcCChhhHHHHH-hcCCCEEEccCCCHHHHHhcCCCCCc
Q 003861 532 EPVVIVGFGQMGQVLANLLSAPL--ASGSDGNTVGWPFV-AFDLNPSVVKESR-KLGFPILYGDASRPAVLLSAGITSPK 607 (791)
Q Consensus 532 ~~viI~G~G~~G~~la~~L~~~~--~~~~~~~~~g~~vv-vID~d~~~v~~~~-~~~~~~v~GD~t~~~~L~~agi~~a~ 607 (791)
=+|-|+|+|.+|+.-++.+++-- ..++ ..+.+++ +.|.|+++.+++. +.+..-.+.|. ++.|++ .+.|
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~---~~~~elvav~d~~~~~a~~~a~~~~~~~~y~d~--~~ll~~---~~vD 98 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDL---PKRPHLYALADQDQAMAERHAAKLGAEKAYGDW--RELVND---PQVD 98 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTS---SSEEEEEEEECSSHHHHHHHHHHHTCSEEESSH--HHHHHC---TTCC
T ss_pred ceEEEEcCcHHHHHHHHHHHhcccccccc---CCCeEEEEEEcCCHHHHHHHHHHcCCCeEECCH--HHHhcC---CCCC
Confidence 37999999999998887775100 0000 1244555 5699999988765 46776666543 345554 5679
Q ss_pred EEEEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEc
Q 003861 608 AVMIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAIL 658 (791)
Q Consensus 608 ~viv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~ 658 (791)
+|+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+.
T Consensus 99 ~V~I~tp~~~H-~~~~~~al~aG--khVl~EKP~a~~~~ea~~l~~~a~~~g~~~~v~ 153 (412)
T 4gqa_A 99 VVDITSPNHLH-YTMAMAAIAAG--KHVYCEKPLAVNEQQAQEMAQAARRAGVKTMVA 153 (412)
T ss_dssp EEEECSCGGGH-HHHHHHHHHTT--CEEEEESCSCSSHHHHHHHHHHHHHHTCCEEEE
T ss_pred EEEECCCcHHH-HHHHHHHHHcC--CCeEeecCCcCCHHHHHHHHHHHHHhCCeeeec
Confidence 99999987543 44555555554 467774 3455555544 4556655544
No 495
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=88.25 E-value=1.6 Score=47.15 Aligned_cols=108 Identities=16% Similarity=0.171 Sum_probs=66.7
Q ss_pred CCEEEeCCChhHHH-HHHHhhhhccCCCCCCCCCCcEE-EEcCChhhHHHHHhcCCCEEEccCCCHHHHHhcCCCCCcEE
Q 003861 532 EPVVIVGFGQMGQV-LANLLSAPLASGSDGNTVGWPFV-AFDLNPSVVKESRKLGFPILYGDASRPAVLLSAGITSPKAV 609 (791)
Q Consensus 532 ~~viI~G~G~~G~~-la~~L~~~~~~~~~~~~~g~~vv-vID~d~~~v~~~~~~~~~~v~GD~t~~~~L~~agi~~a~~v 609 (791)
-++.|+|+|.+|+. .++.+.+ ..+.+++ +.|.|+++.+ ++.+..-.+.|. ++.|+ -.+.|+|
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~---------~~~~~l~av~d~~~~~~~--~~~~~~~~~~~~--~~ll~---~~~~D~V 71 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRS---------VPGLNLAFVASRDEEKVK--RDLPDVTVIASP--EAAVQ---HPDVDLV 71 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHT---------STTEEEEEEECSCHHHHH--HHCTTSEEESCH--HHHHT---CTTCSEE
T ss_pred ceEEEECCCHHHHHHHHHHHhh---------CCCeEEEEEEcCCHHHHH--hhCCCCcEECCH--HHHhc---CCCCCEE
Confidence 36999999999997 7777761 3477776 6699998765 233223334322 23443 2578999
Q ss_pred EEEeCCHHHHHHHHHHHHHhCCCCcEEEE---ecChhhHHHH----HHCCCCeEEc
Q 003861 610 MIMYTDKKRTIEAVQRLRLAFPAIPIYAR---AQDMMHLLDL----KKAGATDAIL 658 (791)
Q Consensus 610 iv~~~~d~~n~~~~~~ar~l~p~~~iiar---a~~~~~~~~L----~~~Gad~Vi~ 658 (791)
+++++++.. ...+..+-+.+ .+|++. +.+.+..+.+ ++.|....+.
T Consensus 72 ~i~tp~~~H-~~~~~~al~aG--k~Vl~EKPla~~~~e~~~l~~~a~~~g~~~~v~ 124 (364)
T 3e82_A 72 VIASPNATH-APLARLALNAG--KHVVVDKPFTLDMQEARELIALAEEKQRLLSVF 124 (364)
T ss_dssp EECSCGGGH-HHHHHHHHHTT--CEEEECSCSCSSHHHHHHHHHHHHHTTCCEEEC
T ss_pred EEeCChHHH-HHHHHHHHHCC--CcEEEeCCCcCCHHHHHHHHHHHHHhCCeEEEE
Confidence 999987543 44455555554 467763 3455554444 5567665444
No 496
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=88.25 E-value=0.77 Score=48.95 Aligned_cols=75 Identities=23% Similarity=0.344 Sum_probs=56.8
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEEccCCCHH---HHHhcCCCCCc
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILYGDASRPA---VLLSAGITSPK 607 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~GD~t~~~---~L~~agi~~a~ 607 (791)
.+.++|.|.|.+|...++.++ ..|.+|+++|.++++.+.+++.|...+. |.++++ .+++.+ ..+|
T Consensus 167 g~~VlV~GaG~vG~~a~qla~----------~~Ga~Vi~~~~~~~~~~~~~~lGa~~~i-~~~~~~~~~~~~~~~-g~~d 234 (340)
T 3s2e_A 167 GQWVVISGIGGLGHVAVQYAR----------AMGLRVAAVDIDDAKLNLARRLGAEVAV-NARDTDPAAWLQKEI-GGAH 234 (340)
T ss_dssp TSEEEEECCSTTHHHHHHHHH----------HTTCEEEEEESCHHHHHHHHHTTCSEEE-ETTTSCHHHHHHHHH-SSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH----------HCCCeEEEEeCCHHHHHHHHHcCCCEEE-eCCCcCHHHHHHHhC-CCCC
Confidence 457999999999999999888 7899999999999999999998876553 444433 233321 2688
Q ss_pred EEEEEeCCHH
Q 003861 608 AVMIMYTDKK 617 (791)
Q Consensus 608 ~viv~~~~d~ 617 (791)
.++-+.+..+
T Consensus 235 ~vid~~g~~~ 244 (340)
T 3s2e_A 235 GVLVTAVSPK 244 (340)
T ss_dssp EEEESSCCHH
T ss_pred EEEEeCCCHH
Confidence 8877776543
No 497
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=88.24 E-value=0.39 Score=48.73 Aligned_cols=113 Identities=13% Similarity=0.053 Sum_probs=62.5
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHHhcCCCEEE-ccCCCHHHHHhcC-CCCCcE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESRKLGFPILY-GDASRPAVLLSAG-ITSPKA 608 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~~~~~~~v~-GD~t~~~~L~~ag-i~~a~~ 608 (791)
+.++.|+|.|.+|..+++.|. +.|++|+.+|..++ +++.+ ++. -|..-.+++++.. .-+.+.
T Consensus 6 ~mkI~IIG~G~~G~sLA~~L~----------~~G~~V~~~~~~~~----~~~aD--ilavP~~ai~~vl~~l~~~l~~g~ 69 (232)
T 3dfu_A 6 RLRVGIFDDGSSTVNMAEKLD----------SVGHYVTVLHAPED----IRDFE--LVVIDAHGVEGYVEKLSAFARRGQ 69 (232)
T ss_dssp CCEEEEECCSCCCSCHHHHHH----------HTTCEEEECSSGGG----GGGCS--EEEECSSCHHHHHHHHHTTCCTTC
T ss_pred CcEEEEEeeCHHHHHHHHHHH----------HCCCEEEEecCHHH----hccCC--EEEEcHHHHHHHHHHHHHhcCCCC
Confidence 447999999999999999998 78999999998543 33333 222 2333355665542 223444
Q ss_pred EEEEe-CCHHHHHHHHHHHHHhCC---------CCcEEEEecChh----hHHHHHHCCCCeEEcCcH
Q 003861 609 VMIMY-TDKKRTIEAVQRLRLAFP---------AIPIYARAQDMM----HLLDLKKAGATDAILENA 661 (791)
Q Consensus 609 viv~~-~~d~~n~~~~~~ar~l~p---------~~~iiara~~~~----~~~~L~~~Gad~Vi~p~~ 661 (791)
+++.+ +.-... +...+++... ..+.+....+++ -.+.++.+|+..+..+..
T Consensus 70 ivvd~sgs~~~~--vl~~~~~~g~~fvg~HPm~g~~~~i~a~d~~a~~~l~~L~~~lG~~vv~~~~~ 134 (232)
T 3dfu_A 70 MFLHTSLTHGIT--VMDPLETSGGIVMSAHPIGQDRWVASALDELGETIVGLLVGELGGSIVEIADD 134 (232)
T ss_dssp EEEECCSSCCGG--GGHHHHHTTCEEEEEEEEETTEEEEEESSHHHHHHHHHHHHHTTCEECCCCGG
T ss_pred EEEEECCcCHHH--HHHHHHhCCCcEEEeeeCCCCceeeeCCCHHHHHHHHHHHHHhCCEEEEeCHH
Confidence 54543 332221 2222223221 112233343443 244457778877666543
No 498
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=88.24 E-value=0.35 Score=49.88 Aligned_cols=72 Identities=10% Similarity=0.078 Sum_probs=52.5
Q ss_pred CCEEEeCC-ChhHHHHHHHhhhhccCCCCCCCCCCcEEEEcCChhhHHHHH----h--cCCCEEEccCCCHHHHHhcC--
Q 003861 532 EPVVIVGF-GQMGQVLANLLSAPLASGSDGNTVGWPFVAFDLNPSVVKESR----K--LGFPILYGDASRPAVLLSAG-- 602 (791)
Q Consensus 532 ~~viI~G~-G~~G~~la~~L~~~~~~~~~~~~~g~~vvvID~d~~~v~~~~----~--~~~~~v~GD~t~~~~L~~ag-- 602 (791)
+.++|.|. |.+|+.+++.|. ++|++|++++.+++..+.+. + ....++.+|.+|++.++++=
T Consensus 35 k~vlITGasggIG~~la~~L~----------~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~ 104 (279)
T 3ctm_A 35 KVASVTGSSGGIGWAVAEAYA----------QAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQ 104 (279)
T ss_dssp CEEEETTTTSSHHHHHHHHHH----------HHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHH----------HCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHH
Confidence 45777765 689999999998 78999999999876544432 2 23567889999998776541
Q ss_pred ----CCCCcEEEEEe
Q 003861 603 ----ITSPKAVMIMY 613 (791)
Q Consensus 603 ----i~~a~~viv~~ 613 (791)
..+.|.+|-..
T Consensus 105 ~~~~~g~id~li~~A 119 (279)
T 3ctm_A 105 QEKDFGTIDVFVANA 119 (279)
T ss_dssp HHHHHSCCSEEEECG
T ss_pred HHHHhCCCCEEEECC
Confidence 13578777654
No 499
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=88.19 E-value=0.54 Score=49.66 Aligned_cols=71 Identities=13% Similarity=0.156 Sum_probs=53.5
Q ss_pred CEEEeC-CChhHHHHHHHhhhhccCCCCCCCC---C---CcEEEEcCCh-----hhHHHHH-hcCCCEEEccCCCHHHHH
Q 003861 533 PVVIVG-FGQMGQVLANLLSAPLASGSDGNTV---G---WPFVAFDLNP-----SVVKESR-KLGFPILYGDASRPAVLL 599 (791)
Q Consensus 533 ~viI~G-~G~~G~~la~~L~~~~~~~~~~~~~---g---~~vvvID~d~-----~~v~~~~-~~~~~~v~GD~t~~~~L~ 599 (791)
+++|.| .|.+|+.+++.|. ++ | ++|+++|.++ +..+.+. ..+..++.+|.+|++.++
T Consensus 2 ~vlVTGatG~iG~~l~~~L~----------~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~ 71 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLL----------AGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLA 71 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHH----------HTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHH
T ss_pred eEEEECCccHHHHHHHHHHH----------hhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHH
Confidence 478888 5999999999998 54 7 8999998754 2222222 135778999999999998
Q ss_pred hcCCCCCcEEEEEeC
Q 003861 600 SAGITSPKAVMIMYT 614 (791)
Q Consensus 600 ~agi~~a~~viv~~~ 614 (791)
++= +++|+||-+..
T Consensus 72 ~~~-~~~d~Vih~A~ 85 (337)
T 1r6d_A 72 REL-RGVDAIVHFAA 85 (337)
T ss_dssp HHT-TTCCEEEECCS
T ss_pred HHh-cCCCEEEECCC
Confidence 763 78898887654
No 500
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=88.13 E-value=0.36 Score=51.26 Aligned_cols=70 Identities=9% Similarity=0.098 Sum_probs=49.6
Q ss_pred CCCEEEeCCChhHHHHHHHhhhhccCCCCCCCCCC-cEEEEcCChhhHHHHHhc-CCCEEEccCCCHHHHHhcCCCCCcE
Q 003861 531 SEPVVIVGFGQMGQVLANLLSAPLASGSDGNTVGW-PFVAFDLNPSVVKESRKL-GFPILYGDASRPAVLLSAGITSPKA 608 (791)
Q Consensus 531 ~~~viI~G~G~~G~~la~~L~~~~~~~~~~~~~g~-~vvvID~d~~~v~~~~~~-~~~~v~GD~t~~~~L~~agi~~a~~ 608 (791)
..++.|+|+|.+|+.+++.|.+ ..|. +|.+.|.++++.+++.+. +..+.. .++.+-. ++++|.
T Consensus 135 ~~~igiIG~G~~g~~~a~~l~~---------~~g~~~V~v~dr~~~~~~~l~~~~~~~~~~--~~~~~e~----v~~aDi 199 (312)
T 2i99_A 135 SEVLCILGAGVQAYSHYEIFTE---------QFSFKEVRIWNRTKENAEKFADTVQGEVRV--CSSVQEA----VAGADV 199 (312)
T ss_dssp CCEEEEECCSHHHHHHHHHHHH---------HCCCSEEEEECSSHHHHHHHHHHSSSCCEE--CSSHHHH----HTTCSE
T ss_pred CcEEEEECCcHHHHHHHHHHHH---------hCCCcEEEEEcCCHHHHHHHHHHhhCCeEE--eCCHHHH----HhcCCE
Confidence 4479999999999999999971 2365 899999999998888654 311211 2233221 246899
Q ss_pred EEEEeCC
Q 003861 609 VMIMYTD 615 (791)
Q Consensus 609 viv~~~~ 615 (791)
|+.++++
T Consensus 200 Vi~atp~ 206 (312)
T 2i99_A 200 IITVTLA 206 (312)
T ss_dssp EEECCCC
T ss_pred EEEEeCC
Confidence 9999886
Done!