BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003865
(790 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9ZVD0|SRRT_ARATH Serrate RNA effector molecule OS=Arabidopsis thaliana GN=SE PE=1
SV=2
Length = 720
Score = 904 bits (2336), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 504/721 (69%), Positives = 567/721 (78%), Gaps = 67/721 (9%)
Query: 74 LDRPPPNRRGPDYYDRNRSPPPPMPRERDRDYKRRSTVSPPPPPLPYRDRRHSPPPRRSP 133
++RPPPNRR +R+RSP PP PR RDYKRR ++SPP PYRDRRHSPP RRSP
Sbjct: 63 IERPPPNRR-----ERDRSPLPP-PR---RDYKRRPSLSPP---PPYRDRRHSPPQRRSP 110
Query: 134 PYKRSRRDDGGYEPRRGSPRGGFGP-DRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGR 192
P KR RRDD GY+ RRGSPRGG+GP DRRFGYD+ GGY+REMGGRPGYGDERPHGRF GR
Sbjct: 111 PQKRYRRDDNGYDGRRGSPRGGYGPPDRRFGYDHGGGYDREMGGRPGYGDERPHGRFMGR 170
Query: 193 SSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQELEDDILPAEAERRYQEYK 252
YQ +W+ RGGYGDASN+G+ QR+GLMSYKQFIQELEDDILP+EAERRYQEYK
Sbjct: 171 ----YQ----DWEGGRGGYGDASNSGNPQRDGLMSYKQFIQELEDDILPSEAERRYQEYK 222
Query: 253 SEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDKYHPTNLVAVIER 312
SEYI+TQKR FF+ HK+E+W LK+KYHPTNL++VIER
Sbjct: 223 SEYITTQKRAFFNTHKEEDW------------------------LKNKYHPTNLLSVIER 258
Query: 313 RNDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKLGQTSEPNSDDDVDNGGKRRRHGRGP 372
RNDLA+KVAKDFLLDLQSGTLDLGP+V A NK G+TSEPNS+D+ GKR+RHG G
Sbjct: 259 RNDLAQKVAKDFLLDLQSGTLDLGPAVTAL--NKSGRTSEPNSEDEAAGVGKRKRHGMGG 316
Query: 373 AKETDLLSAAPKAHPISSEPRRIQVDIEQAQALVRKLDSEKGITENILCGSDNDKMNREK 432
AKE +LLSAAPKA +S+P+RI D+EQ QALVRKLDSEK I EN+L GS+ +K REK
Sbjct: 317 AKENELLSAAPKAPSFTSDPKRILTDVEQTQALVRKLDSEKKIEENVLQGSETEKSGREK 376
Query: 433 SH-GSTGPVIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMVETSEAKGLRHVRAE 491
H GSTGPV+IIRGLTSVKGLEGVELLDTL+TYLWR+HG+DYYG VET+EAKGLRHVRAE
Sbjct: 377 LHSGSTGPVVIIRGLTSVKGLEGVELLDTLVTYLWRVHGLDYYGKVETNEAKGLRHVRAE 436
Query: 492 GKSSDITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKY 551
GK SD G E E K D WQERL+ QDPLE+M AK+KIDAAA +ALDP VRKIRDEKY
Sbjct: 437 GKVSDA--KGDENESKFDSHWQERLKGQDPLEVMAAKEKIDAAATEALDPHVRKIRDEKY 494
Query: 552 GWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPGGTP 611
GWKYGCGAKGCTKLFHAAEFV+KHLKLKH ELV ELT+KVREELYFQNYMNDP+APGG P
Sbjct: 495 GWKYGCGAKGCTKLFHAAEFVYKHLKLKHTELVTELTTKVREELYFQNYMNDPNAPGGQP 554
Query: 612 VMQQPMPKDRPLRRKLGPDNRLKDERGNRRDRDYRANGSDRYDRSDNAQASDFPSNDDVP 671
QQ P+DRP+RRK +NRL+D+RG RR+RD RANG+DR DRS++ Q D ND
Sbjct: 555 ATQQSGPRDRPIRRKPSMENRLRDDRGGRRERDGRANGNDRNDRSEDQQRGD---ND--- 608
Query: 672 EGANRDESMFDTFGGQGIRVAPPFPSDIPPPPVLMPVPGAGPLGPFVPAPPEVAMQMIRD 731
G N E +D FGGQG PPF SDI PPP+LMPVPGAGPLGPFVPAPPEVAMQM RD
Sbjct: 609 -GGNPGEVGYDAFGGQGGVHVPPFLSDINPPPMLMPVPGAGPLGPFVPAPPEVAMQMFRD 667
Query: 732 QGG--PPFEGGGRHGRPGPQISGPGPILLSPAFRQDPRRIRSYQDLDAPEDEVTVMDYRS 789
G PPFEG GR GP P LLSPAFRQDPRR+RSYQDLDAPE+EVTV+DYRS
Sbjct: 668 PSGPNPPFEGSGR--------GGPAPFLLSPAFRQDPRRLRSYQDLDAPEEEVTVIDYRS 719
Query: 790 L 790
L
Sbjct: 720 L 720
>sp|B4LIK8|SRRT_DROVI Serrate RNA effector molecule homolog OS=Drosophila virilis GN=Ars2
PE=3 SV=1
Length = 963
Score = 65.5 bits (158), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/224 (26%), Positives = 97/224 (43%), Gaps = 49/224 (21%)
Query: 124 RHSPPPRRSPPYKRSRRDDGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDE 183
R+ P R PP KR R D G E R +PR G+ P + Y+
Sbjct: 81 RYGSPGREMPPAKRMRPDWGESE-MRSNPRFGYDP--YLVQAWNDHYQ------------ 125
Query: 184 RPHGRFAGRSSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQELEDDILPAE 243
+ S+ + S PS S+R + N+ + + +++ KQF+ +++I +E
Sbjct: 126 ------SLHSAYSHSSHPS---SARESAPNVVNSDTQTQPAMLTLKQFLDTQDENISDSE 176
Query: 244 AERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDKYHP 303
R+Y EYK+++ Q FF AHKDEEW+ K+KYHP
Sbjct: 177 VMRKYTEYKTDFKRQQLNEFFVAHKDEEWF------------------------KNKYHP 212
Query: 304 TNLVAVIERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKL 347
+ V E + ++ FL L++GT+ V++S ++ L
Sbjct: 213 EDSVRRSEEQRGFLKRRTDVFLELLENGTIG-SVKVDSSQADSL 255
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 508
+ +LD L+ YL +H VDYY E G+ H R +N+ E+ K
Sbjct: 726 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPMRVTSNDVQEYIKAY 785
Query: 509 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 568
D + Q+ L L K+ ++ FV+ E K+ C G K F
Sbjct: 786 DGKLQQFLTKSVQLSDDEIKELGAKNPETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 843
Query: 569 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 844 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 879
>sp|Q5TUF1|SRRT_ANOGA Serrate RNA effector molecule homolog OS=Anopheles gambiae GN=Ars2
PE=3 SV=3
Length = 967
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 113/290 (38%), Gaps = 73/290 (25%)
Query: 75 DRPPPNRRGPDYYDRNRSPPPPMPRERDRDYKRRSTVSPPPPPLPYRDRRHSPPPRRSPP 134
DRP +R D+ DR R PR+ RDY+ PPP RDR +SP R P
Sbjct: 34 DRPDRSRGRDDWPDRVR------PRQDYRDYR--------PPP---RDRGYSPA-REGPT 75
Query: 135 YKRSRRDDGGYEPR-RGSPRGGFGPDRRFGYDYTGGYEREMGGRPG---YGDERPHGRFA 190
KR R D G E R R G+G +GY + G P YG + +
Sbjct: 76 VKRMRGDTWGDEGRHRFGAHDGYG---MYGYAHD-----HFGMHPTVGPYGHQHATHQRE 127
Query: 191 GRSSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQELEDDILPAEAERRYQE 250
SG Q+ P +M+ KQF+ +D I ++A +Y E
Sbjct: 128 PVVSGDMQTQPC----------------------MMTLKQFLATQDDSISDSDAITKYNE 165
Query: 251 YKSEYISTQKRVFFDAHKDEEWYFSSF----------TLFLLCTLRCSYYMCFVCRLKDK 300
YK E+ Q FF AHKDEEW+ + RC ++ + K
Sbjct: 166 YKLEFRRQQMNEFFVAHKDEEWFKIKYHPEESQKRKEEQLSFLKRRCEVFLELL-----K 220
Query: 301 YHPTNLVAVIERRNDLARKVAKDFLLDLQSGT------LDLGPSVNASSS 344
V+V D ++ ++ L+ GT LD+ PSV +++
Sbjct: 221 SKEIGKVSVDASNTDALLRLLDTVVIKLEGGTEEDLKVLDIKPSVVEAAA 270
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 14/161 (8%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRA-EGKSSDITNNGAEWEKK 507
+E+LD LI YL +H VD+Y E G+ H R +S ++N E+ +
Sbjct: 718 IEVLDRLILYLRIVHSVDFYNHCEYPYEDEMPNRCGIIHARGPPSQSKVMSNEIQEYIRT 777
Query: 508 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDA-LDPFVRKIRDEKYGWKYGCGAKGCTKLF 566
+ + L ++ K K+ A +A ++ F+ E K+ C G K F
Sbjct: 778 FEGKMASFLTRMVDIDETDMK-KLGAKDAEAEVEKFITANTQELAKDKWLCPLSG--KKF 834
Query: 567 HAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
+FV KH+ KH E V E+ +V YF NY+ D P
Sbjct: 835 KGPDFVRKHIFNKHAEKVEEVRKEVE---YFNNYLKDSKRP 872
>sp|B3MJ69|SRRT_DROAN Serrate RNA effector molecule homolog OS=Drosophila ananassae
GN=Ars2 PE=3 SV=1
Length = 948
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 70/159 (44%), Gaps = 11/159 (6%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 508
+ +LD L+ YL +H VDYY E G+ H R S +N+ E+ K
Sbjct: 711 LAVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPSRVTSNDIHEYVKTY 770
Query: 509 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 568
+ + Q+ L L KD A ++ FV+ E K+ C G K F
Sbjct: 771 ESKLQQFLTKTALLSDEETKDLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 828
Query: 569 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 829 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 864
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 80/197 (40%), Gaps = 47/197 (23%)
Query: 148 RRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPSEWDSS 207
R GSP P +R D+ G GD RP+ RF G Q+ + S
Sbjct: 81 RYGSPGRDLPPAKRMRPDW------------GDGDVRPNPRFGGYDPYLMQAWNDHYQSI 128
Query: 208 RGGYGDASNTGSTQREG-----------LMSYKQFIQELEDDILPAEAERRYQEYKSEYI 256
Y S+ + G +++ KQF+ +++I +E R+Y EYK+++
Sbjct: 129 HSAYSHGSHMPPVRESGGSGGDSLTQPAMLNLKQFLDTQDENISDSEVMRKYTEYKTDFK 188
Query: 257 STQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDKYHPTNLVAVIERRNDL 316
Q FF AHKDEEW+ K+KYHP + V E +
Sbjct: 189 RQQLNEFFVAHKDEEWF------------------------KNKYHPEDSVRRAEEQRGF 224
Query: 317 ARKVAKDFLLDLQSGTL 333
++ F+ L++GT+
Sbjct: 225 LKRRTDVFVELLENGTI 241
>sp|Q17FR9|SRRT_AEDAE Serrate RNA effector molecule homolog OS=Aedes aegypti GN=Ars2 PE=3
SV=1
Length = 937
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 62/199 (31%), Positives = 86/199 (43%), Gaps = 48/199 (24%)
Query: 82 RGPDYYDRNRS----PPPPMPRERDRDYKRRSTVSPPPPPLPYRDRRHSPPPRRSPPYKR 137
RG D DR+R PR+ RDY+ PPP RDR +SP R PP KR
Sbjct: 28 RGADRADRSRGRDEWAERGRPRQDYRDYR--------PPP---RDRGYSPT-REGPPMKR 75
Query: 138 SRRDDGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGY 197
R D G+G D RP +G P+G + G + +
Sbjct: 76 MRGD-------------GWGDD----------------ARPRFGGHEPYGMYGGYNHDHF 106
Query: 198 QSGPSEWDSSRGGYG--DASNTGSTQRE-GLMSYKQFIQELEDDILPAEAERRYQEYKSE 254
P+ GG + + G Q + +M+ KQF+ +D I +EA ++Y +YK E
Sbjct: 107 GMHPAGPYGHPGGLHPREQQSAGDMQTQPCMMTLKQFLATQDDSISDSEAIQKYNDYKLE 166
Query: 255 YISTQKRVFFDAHKDEEWY 273
+ Q FF AHKDEEW+
Sbjct: 167 FKRQQLNEFFVAHKDEEWF 185
Score = 53.1 bits (126), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 20/170 (11%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGA-EWEKK 507
+E+LD LI YL +H +D+Y E G+ H R + +T+N E+ +
Sbjct: 697 IEVLDKLILYLRVVHSIDFYNHCEYPYEDEMPNRCGIIHARGPPPQNKVTSNEIQEYIRT 756
Query: 508 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDA-LDPFVRKIRDEKYGWKYGCGAKGCTKLF 566
+ + L LE K K+ A +A ++ F++ E K+ C G K F
Sbjct: 757 FEGKMGSFLARAVDLEEEEMK-KLGAKDAEAEVEKFIQANTQELAKDKWLCPLSG--KKF 813
Query: 567 HAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMND------PDAPGGT 610
+FV KH+ KH E V E+ +V YF NY+ D P+ PG T
Sbjct: 814 KGPDFVRKHIFNKHNEKVDEVRKEVE---YFNNYLKDTKRPQLPEHPGNT 860
>sp|B4QCR6|SRRT_DROSI Serrate RNA effector molecule homolog OS=Drosophila simulans
GN=Ars2 PE=3 SV=1
Length = 947
Score = 63.2 bits (152), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 508
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 710 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPVRVTNNDVQEYIKMY 769
Query: 509 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 568
+ + Q+ L PL K+ A ++ FV+ E K+ C G K F
Sbjct: 770 ETKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 827
Query: 569 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 863
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 88/216 (40%), Gaps = 49/216 (22%)
Query: 144 GYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPSE 203
G PR GSP P +R D+ G GD R + RF G Q+
Sbjct: 74 GARPRYGSPGRDLPPAKRMRPDW------------GDGDVRANPRFGGYDPYLMQAWNDH 121
Query: 204 WDSSRGGYGDASN------------TGSTQREGLMSYKQFIQELEDDILPAEAERRYQEY 251
+ S Y A + + + + +++ KQF+ +++I +E R+Y EY
Sbjct: 122 YQSMHSAYSHAGHAPPVRESIGGGGSDTLTQPAMLNLKQFLDTQDENISDSEVMRKYTEY 181
Query: 252 KSEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDKYHPTNLVAVIE 311
K+++ Q FF AHKDEEW+ K+KYHP + V E
Sbjct: 182 KTDFKRQQLNEFFVAHKDEEWF------------------------KNKYHPEDSVKRSE 217
Query: 312 RRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKL 347
+ ++ F+ ++GT+ V++S ++ L
Sbjct: 218 EQRGFLQRRTDVFMELFENGTIG-SVKVDSSQADAL 252
>sp|B4MR46|SRRT_DROWI Serrate RNA effector molecule homolog OS=Drosophila willistoni
GN=Ars2 PE=3 SV=1
Length = 1000
Score = 63.2 bits (152), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 81/182 (44%), Gaps = 17/182 (9%)
Query: 435 GSTGPVIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHV 488
G +G + G V+ + + +LD L+ YL +H VDYY E G+ H
Sbjct: 742 GLSGDQNDVEGEPIVRDEQLIAVLDRLLLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHA 801
Query: 489 RAEGKSSDITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDA---LDPFVRK 545
R +N+ E+ K + + Q+ L ++T D D A DA ++ FV+
Sbjct: 802 RGPAPMKVTSNDIQEYIKSYEGKLQQFLTK---TVLLTDDDIKDLGAKDAETEVEKFVQA 858
Query: 546 IRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPD 605
E K+ C G K F EF+ KH+ KH E V E+ +V+ +F NY+ DP
Sbjct: 859 NTQELAKDKWLCPLSG--KKFKGPEFIRKHIFNKHEEKVDEVRKEVQ---FFNNYLRDPK 913
Query: 606 AP 607
P
Sbjct: 914 RP 915
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 96/224 (42%), Gaps = 57/224 (25%)
Query: 124 RHSPPPRRSPPYKRSRRD--DGGYEPRRGSPRGGFGPDRRFGYD-YTGGYEREMGGRPGY 180
R+ P R PP KR R D D G R +PR G GYD Y E Y
Sbjct: 82 RYGSPGREMPPAKRMRPDWPDEGM---RSNPRFG-------GYDPYMMQAWNEHYQSLHY 131
Query: 181 GDERPHGRFAGRSSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQELEDDIL 240
HG GG+ P ++S G G+ + T + +++ KQF+ +++I
Sbjct: 132 S----HG-------GGHM--PIARETSGPGIGNDTQT----QPAMLTLKQFLDTQDENIS 174
Query: 241 PAEAERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDK 300
+E R+Y EYK+++ Q FF AHKDEEW+ K+K
Sbjct: 175 DSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWF------------------------KNK 210
Query: 301 YHPTNLVAVIERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSS 344
YHP + V + + ++ + F+ L++GT+ SV SS
Sbjct: 211 YHPEDSVRRSDEQRGFLQRRSSVFVELLENGTIG---SVKVDSS 251
>sp|B4II37|SRRT_DROSE Serrate RNA effector molecule homolog OS=Drosophila sechellia
GN=Ars2 PE=3 SV=2
Length = 947
Score = 62.8 bits (151), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 508
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 710 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPVRVTNNDVQEYIKMY 769
Query: 509 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 568
+ + Q+ L PL K+ A ++ FV+ E K+ C G K F
Sbjct: 770 ETKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 827
Query: 569 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 863
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 89/216 (41%), Gaps = 49/216 (22%)
Query: 144 GYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPSE 203
G PR GSP P +R D+ G GD R + RF G Q+
Sbjct: 74 GARPRYGSPGRDLPPAKRMRPDW------------GDGDVRANPRFGGYDPYLMQAWNDH 121
Query: 204 WDSSRGGYGDASN------------TGSTQREGLMSYKQFIQELEDDILPAEAERRYQEY 251
+ S Y A + + + + +++ KQF+ +++I +E R+Y +Y
Sbjct: 122 YQSMHSAYSHAGHAPPVRESIGGGGSDTLTQPAMLNLKQFLDTQDENISDSEVMRKYTDY 181
Query: 252 KSEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDKYHPTNLVAVIE 311
K+++ Q FF AHKDEEW+ K+KYHP + V E
Sbjct: 182 KTDFKRQQLNEFFVAHKDEEWF------------------------KNKYHPEDSVKRNE 217
Query: 312 RRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKL 347
+ ++ F+ L++GT+ V++S ++ L
Sbjct: 218 EQRGFLQRRTDVFMELLENGTIG-SVKVDSSQADAL 252
>sp|Q28WQ8|SRRT_DROPS Serrate RNA effector molecule homolog OS=Drosophila pseudoobscura
pseudoobscura GN=Ars2 PE=3 SV=2
Length = 951
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKK- 507
+ +LD L+ YL +H VDYY E G+ H R S +N E+ K
Sbjct: 715 LSVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPSRVTSNELNEYIKSY 774
Query: 508 ----LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCT 563
L F + L S+D ++ + AK+ A ++ FV+ E K+ C G
Sbjct: 775 EGKLLQFLTKTALLSEDQIKDLGAKN-----ADTEVEKFVQANTQELAKDKWLCPLSG-- 827
Query: 564 KLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
K F EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 KKFKGPEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 868
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 92/228 (40%), Gaps = 52/228 (22%)
Query: 129 PRRSPPYKRSRRDDGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGR 188
PR P Y R G R GSP P +R D+ G GD RP R
Sbjct: 61 PRHRPDYSDYR--GPGPRARYGSPVRDMPPPKRMRSDW------------GDGDGRPGPR 106
Query: 189 FAGRSSGGYQSGPSEWDSSRGGYGDASN----------TGSTQRE-GLMSYKQFIQELED 237
+ G Q+ + S Y AS+ G T + +++ KQF+ ++
Sbjct: 107 YGGYDPYLMQAWTDHYQSMHSAYHHASHPPPVRELPIIGGDTLTQPAMLNLKQFLDTQDE 166
Query: 238 DILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRL 297
+I +E R+Y EYK+++ Q FF AHKDEEW+
Sbjct: 167 NISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWF------------------------ 202
Query: 298 KDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSN 345
K+KYHP + V E + R+ F+ L++GT+ SV SS+
Sbjct: 203 KNKYHPEDSVNRSEEQRGFLRRRTDVFVELLENGTIG---SVKVDSSH 247
>sp|B4H732|SRRT_DROPE Serrate RNA effector molecule homolog OS=Drosophila persimilis
GN=Ars2 PE=3 SV=1
Length = 951
Score = 62.8 bits (151), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 74/164 (45%), Gaps = 21/164 (12%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKK- 507
+ +LD L+ YL +H VDYY E G+ H R S +N E+ K
Sbjct: 715 LSVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPSRVTSNELNEYIKSY 774
Query: 508 ----LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCT 563
L F + L S+D ++ + AK+ A ++ FV+ E K+ C G
Sbjct: 775 EGKLLQFLTKTALLSEDQIKDLGAKN-----ADTEVEKFVQANTQELAKDKWLCPLSG-- 827
Query: 564 KLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
K F EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 KKFKGPEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 868
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 63/228 (27%), Positives = 92/228 (40%), Gaps = 52/228 (22%)
Query: 129 PRRSPPYKRSRRDDGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGR 188
PR P Y R G R GSP P +R D+ G GD RP R
Sbjct: 61 PRHRPDYSDYR--GPGPRARYGSPVRDMPPPKRMRSDW------------GDGDGRPGPR 106
Query: 189 FAGRSSGGYQSGPSEWDSSRGGYGDASN----------TGSTQRE-GLMSYKQFIQELED 237
+ G Q+ + S Y AS+ G T + +++ KQF+ ++
Sbjct: 107 YGGYDPYLMQAWTDHYQSMHSAYHHASHPPPVRELPIIGGDTLTQPAMLNLKQFLDTQDE 166
Query: 238 DILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRL 297
+I +E R+Y EYK+++ Q FF AHKDEEW+
Sbjct: 167 NISDSEVMRKYTEYKTDFKRQQLNEFFVAHKDEEWF------------------------ 202
Query: 298 KDKYHPTNLVAVIERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSN 345
K+KYHP + V E + R+ F+ L++GT+ SV SS+
Sbjct: 203 KNKYHPEDSVNRSEEQRGFLRRRTDVFVELLENGTIG---SVKVDSSH 247
>sp|B3N3F7|SRRT_DROER Serrate RNA effector molecule homolog OS=Drosophila erecta GN=Ars2
PE=3 SV=1
Length = 947
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 51/203 (25%)
Query: 144 GYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDE--RPHGRFAGRSSGGYQSGP 201
G PR GSP P +R RP +GD RP+ RF G Q+
Sbjct: 75 GARPRYGSPGRDLPPAKRM--------------RPDWGDADLRPNPRFGGYDPYLMQAWN 120
Query: 202 SEWDSSRGGYGDASNT----------GSTQRE-GLMSYKQFIQELEDDILPAEAERRYQE 250
+ S Y A + G T + +++ KQF+ +++I +E R+Y E
Sbjct: 121 DHYQSMHSAYSHAGHAPPVRESIGGGGDTLTQPAMLNLKQFLDTQDENISDSEVMRKYTE 180
Query: 251 YKSEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDKYHPTNLVAVI 310
YK+++ Q FF AHKDEEW+ K+KYHP + V
Sbjct: 181 YKTDFKRQQLNEFFVAHKDEEWF------------------------KNKYHPEDSVKRS 216
Query: 311 ERRNDLARKVAKDFLLDLQSGTL 333
+ + ++ F+ L++GT+
Sbjct: 217 DEQRGFLQRRTDVFVELLENGTI 239
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 67/159 (42%), Gaps = 11/159 (6%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 508
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 710 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPVRVTNNDVQEYIKTY 769
Query: 509 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 568
+ + Q+ L L KD ++ FV+ E K+ C G K F
Sbjct: 770 ESKLQQFLTKTVLLSDEEIKDLGAKDPETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 827
Query: 569 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 828 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 863
>sp|Q9V9K7|SRRT_DROME Serrate RNA effector molecule homolog OS=Drosophila melanogaster
GN=Ars2 PE=1 SV=2
Length = 943
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 508
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 706 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPPPVRVTNNDVQEYIKIY 765
Query: 509 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 568
+ + Q+ L PL K+ A ++ FV+ E K+ C G K F
Sbjct: 766 ESKLQQFLTKTVPLSDEEIKNLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 823
Query: 569 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 824 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 859
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 88/216 (40%), Gaps = 49/216 (22%)
Query: 144 GYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPSE 203
G PR GSP P +R D+ G GD R + RF G Q+
Sbjct: 74 GARPRYGSPVRDLPPAKRMRPDW------------GDGDVRANPRFGGYDPYLMQAWNDH 121
Query: 204 WDSSRGGYGDASNT-----------GSTQRE-GLMSYKQFIQELEDDILPAEAERRYQEY 251
+ S Y + G T + +++ KQF+ +++I +E R+Y EY
Sbjct: 122 YQSMHSAYSHGGHAPPVRESIGGGGGDTLTQPAMLNLKQFLDTQDENISDSEVMRKYTEY 181
Query: 252 KSEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDKYHPTNLVAVIE 311
K+++ Q FF AHKDEEW+ K+KYHP + V E
Sbjct: 182 KTDFKRQQLNEFFVAHKDEEWF------------------------KNKYHPEDSVKRSE 217
Query: 312 RRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKL 347
+ ++ F+ L++GT+ V++S ++ L
Sbjct: 218 EQRGFLQRRTDVFMELLENGTIG-SVKVDSSQADAL 252
>sp|B4KLY7|SRRT_DROMO Serrate RNA effector molecule homolog OS=Drosophila mojavensis
GN=Ars2 PE=3 SV=1
Length = 980
Score = 61.6 bits (148), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 96/224 (42%), Gaps = 46/224 (20%)
Query: 124 RHSPPPRRSPPYKRSRRDDGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDE 183
R+ P R PP KR R D G E R +PR G+ P Y + Y
Sbjct: 82 RYGSPGREMPPAKRMRPDWGDSE-MRSNPRFGYDP-----YLVQAWNDHYQSLHSAY--- 132
Query: 184 RPHGRFAGRSSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQELEDDILPAE 243
S G+ GPS ++ G G S TQ +++ KQF+ +++I +E
Sbjct: 133 ---------SHAGH--GPSVRETGPAGGGGVSGDTQTQ-PAMLTLKQFLDTQDENISDSE 180
Query: 244 AERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDKYHP 303
R+Y EYK+++ Q FF AHKDEEW+ K+KYHP
Sbjct: 181 VMRKYTEYKTDFKRQQLNEFFVAHKDEEWF------------------------KNKYHP 216
Query: 304 TNLVAVIERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKL 347
+ V E + ++ + FL L++GT+ V++S ++ L
Sbjct: 217 EDSVRRSEEQRGFLKRRTEVFLELLENGTIG-SVKVDSSQADAL 259
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 508
+ +LD L+ YL +H VDYY E G+ H R +N+ E+ K
Sbjct: 744 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPMRVTSNDVQEYIKAY 803
Query: 509 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 568
D + Q+ L L K+ ++ FV+ E K+ C G K F
Sbjct: 804 DGKLQQFLTKTVQLSDEEIKELGAKNPETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 861
Query: 569 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 862 PEFIRKHIFNKHEEKVEEVRKEVQ---YFNNYLRDPKRP 897
>sp|B4J497|SRRT_DROGR Serrate RNA effector molecule homolog OS=Drosophila grimshawi
GN=Ars2 PE=3 SV=1
Length = 1011
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/214 (26%), Positives = 94/214 (43%), Gaps = 42/214 (19%)
Query: 143 GGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPS 202
G PR GSP P +R D+ G EM P +G + P+ + YQS S
Sbjct: 84 SGPRPRYGSPGREMPPAKRMRPDWGDG---EMRANPRFGYD-PY--LVQAWNDHYQSLHS 137
Query: 203 EWDSSRGGYGDA---------SNTGSTQREGLMSYKQFIQELEDDILPAEAERRYQEYKS 253
+ S G+ + SN+ + + +++ KQF+ +++I +E R+Y EYK+
Sbjct: 138 AY--SHSGHAPSAREPPPSGISNSDTQTQPAMLTLKQFLDTQDENISDSEVMRKYTEYKT 195
Query: 254 EYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDKYHPTNLVAVIERR 313
++ Q FF AHKDEEW+ K+KYHP + V + +
Sbjct: 196 DFKRQQLNEFFVAHKDEEWF------------------------KNKYHPEDSVRRSDEQ 231
Query: 314 NDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKL 347
++ FL L +GT+ V++S ++ L
Sbjct: 232 RGFLKRRTDVFLELLNNGTIS-NVKVDSSQADAL 264
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 11/159 (6%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 508
+++LD L+ YL +H VDYY E G+ H R +N+ E+ K
Sbjct: 774 IQVLDRLVLYLRVVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPMRVTSNDVQEYIKSY 833
Query: 509 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 568
+ + Q+ L L K+ ++ FV+ E K+ C G K F
Sbjct: 834 EGKLQQFLAKTVQLSDENIKELGAKNPEKEVEKFVQANTQELAKDKWLCPLSG--KKFKG 891
Query: 569 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 892 PEFIRKHIFNKHEEKVDEVRKEVQ---YFNNYLRDPKRP 927
>sp|B4NYV0|SRRT_DROYA Serrate RNA effector molecule homolog OS=Drosophila yakuba GN=Ars2
PE=3 SV=1
Length = 944
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 68/159 (42%), Gaps = 11/159 (6%)
Query: 455 VELLDTLITYLWRIHGVDYYGMV------ETSEAKGLRHVRAEGKSSDITNNGAEWEKKL 508
+ +LD L+ YL +H VDYY E G+ H R N+ E+ K
Sbjct: 707 ISVLDRLVLYLRIVHSVDYYNHCEYPYEDEMPNRCGIIHARGPAPVRVTNNDVQEYIKTY 766
Query: 509 DFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFHA 568
+ + Q+ L L KD A ++ FV+ E K+ C G K F
Sbjct: 767 ESKLQQFLTKTVLLSDEEIKDLGAKDAETEVEKFVQANTQELAKDKWLCPLSG--KKFKG 824
Query: 569 AEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
EF+ KH+ KH E V E+ +V+ YF NY+ DP P
Sbjct: 825 PEFIRKHIFNKHDEKVDEVRKEVQ---YFNNYLRDPKRP 860
Score = 60.8 bits (146), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 82/202 (40%), Gaps = 48/202 (23%)
Query: 144 GYEPRRGSPRGGFGPDRRFGYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPSE 203
G PR GSP P +R D+ G GD R + RF G Q+
Sbjct: 75 GARPRYGSPGRDLPPAKRMRPDW------------GDGDVRANPRFGGYDPYLMQAWNDH 122
Query: 204 WDSSRGGYGDASN------------TGSTQREGLMSYKQFIQELEDDILPAEAERRYQEY 251
+ S + A + + + + +++ KQF+ +++I +E R+Y EY
Sbjct: 123 YQSMHSAFSHAGHAPPVRESIGGGGSDTLTQPAMLNLKQFLDTQDENISDSEVMRKYTEY 182
Query: 252 KSEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDKYHPTNLVAVIE 311
K+++ Q FF AHKDEEW+ K+KYHP + V E
Sbjct: 183 KTDFKRQQLNEFFVAHKDEEWF------------------------KNKYHPEDSVKRSE 218
Query: 312 RRNDLARKVAKDFLLDLQSGTL 333
+ ++ F+ L++GT+
Sbjct: 219 EQRGFLQRRTDVFVELLENGTI 240
>sp|Q966L5|SRRT_CAEEL Serrate RNA effector molecule homolog OS=Caenorhabditis elegans
GN=E01A2.2 PE=3 SV=1
Length = 712
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 5/104 (4%)
Query: 175 GGRPGYGDERPHGR---FAGRSSGGYQSGPSEWDSSRGGYGDA--SNTGSTQREGLMSYK 229
GG Y ++RP GR + + S G + S SR G G + + S L ++K
Sbjct: 29 GGFNRYDNKRPGGRRDDYQVKRSRGDDADDSFDPVSRSGNGSDLPTESDSIYSGPLQTFK 88
Query: 230 QFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWY 273
+F+ EDDI +A ++Y EYK+E+ Q FF AHKDEEW+
Sbjct: 89 KFLTSQEDDISEEDAIKKYNEYKTEHRKHQLERFFRAHKDEEWF 132
Score = 44.7 bits (104), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 77/188 (40%), Gaps = 39/188 (20%)
Query: 455 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAE---GKSSDITNNGA--- 502
++ LD LI YL +H +D+Y ++ GL HVR + G S +GA
Sbjct: 457 LKALDLLIVYLRIVHSIDFYNHGHYAQEDSMPNRCGLIHVRGQPPSGVSITTDEDGALVV 516
Query: 503 --------------EWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRD 548
EK L +++ S++ LE M KD ++ F++K
Sbjct: 517 PQKFVNDFISGFNSRIEKGL---IEKQYVSEEELEKMGKKD-----GEKEVEAFIQKNTV 568
Query: 549 EKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 608
E K+ C G K F EF+ KHL+ KH + + E + E +F NY+ D P
Sbjct: 569 ELAKDKWLCPLSG--KKFKGPEFIRKHLQSKHEDKLEEARA---EADFFNNYLADAQRPV 623
Query: 609 GTPVMQQP 616
Q P
Sbjct: 624 DCEPKQAP 631
>sp|Q6INH5|SRRTB_XENLA Serrate RNA effector molecule homolog B OS=Xenopus laevis GN=srrt-b
PE=2 SV=1
Length = 844
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 80/183 (43%), Gaps = 32/183 (17%)
Query: 455 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITN-NGAEWEKK 507
+++LD L+ YL +H VDYY E G+ HVR + +++ EW+K
Sbjct: 586 IKVLDKLLFYLRIVHSVDYYNTCEYPNEDEMPTRCGMMHVRGPLPPNRVSHGEVTEWQKT 645
Query: 508 LD------FRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKG 561
++ F +E L S+D M KD A + FV E K+ C G
Sbjct: 646 IEEKLAPLFAVRETL-SEDEAMKMGKKDPEQEA-----EKFVTANTQELGKEKWLCPLSG 699
Query: 562 CTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPGGTPVMQQPMPKDR 621
K F EFV KH+ KH E + E+ +V +F NY+ D P +P+ +
Sbjct: 700 --KKFKGPEFVRKHIFNKHAEKIEEVKKEVE---FFNNYLTDSKRPA--------LPEVK 746
Query: 622 PLR 624
PL+
Sbjct: 747 PLQ 749
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 72/164 (43%), Gaps = 30/164 (18%)
Query: 121 RDRRHSPPPRR---SPPYKRSRRD--DGGYEPRRGSPRGGFGPDRRFGYDYTGGYEREMG 175
R RR P+R SPP KR RRD D G +P Y GYE
Sbjct: 60 RSRRDRFSPQRHDISPPQKRMRRDWDDHGSDP------------------YHSGYEMPYS 101
Query: 176 GR--PGYGDERPHGRFAGRSSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSYKQFIQ 233
P YG +P G + P + +R G + G T + ++K+F+
Sbjct: 102 SSAGPAYGPPQPWGH-PEMHVMQHHGIPIQ---ARLGNLHDVDLG-TPAPTMKTFKEFLL 156
Query: 234 ELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSF 277
LED + EA +RY +YK ++ Q + FF AHKDEEW+ S +
Sbjct: 157 SLEDSVDETEAVKRYNDYKIDFRRQQMQEFFLAHKDEEWFRSKY 200
>sp|Q60436|SRRT_CRIGR Serrate RNA effector molecule homolog (Fragment) OS=Cricetulus
griseus GN=SRRT PE=2 SV=3
Length = 306
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 455 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITNNGA-EWEKK 507
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 36 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 95
Query: 508 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 567
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 96 FEEKLTPLLSVRESLSEEEAQKMGRKDTEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 153
Query: 568 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 608
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 154 GPEFVRKHIFNKHAEKIEEVKKEVA---FFNNFLTDAKRPA 191
>sp|B1H1X4|SRRTA_XENLA Serrate RNA effector molecule homolog A OS=Xenopus laevis GN=srrt-a
PE=2 SV=1
Length = 849
Score = 55.5 bits (132), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 77/169 (45%), Gaps = 20/169 (11%)
Query: 455 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITN-NGAEWEKK 507
+++LD L+ YL +H VDYY E G+ HVR + +++ AEW+K
Sbjct: 591 IKVLDKLLFYLRIVHSVDYYNTCEYPNEDEMPTRCGMMHVRGPLPPNRVSHGEVAEWQKT 650
Query: 508 LDFRWQERLRSQDPL-EIMTAKDKIDAAAVD---ALDPFVRKIRDEKYGWKYGCGAKGCT 563
++E+L + E ++ ++ I D ++ FV E K+ C G
Sbjct: 651 ----FEEKLAPLFAVRETLSEEESIKMGKKDPEQEVEKFVAANTQELGKEKWLCPLSG-- 704
Query: 564 KLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPGGTPV 612
K F EFV KH+ KH E + E+ +V ++F NY+ D P V
Sbjct: 705 KKFKGPEFVRKHIFNKHAEKIEEVKKEV---VFFNNYLIDSKRPALLEV 750
Score = 40.4 bits (93), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 68/169 (40%), Gaps = 39/169 (23%)
Query: 121 RDRRHSPPPRR---SPPYKRSRRD---------DGGYEPRRGSPRGGFGPDRRFGYDYTG 168
R RR P+R SPP KR RRD GY+ S GG G + +
Sbjct: 60 RSRRERFSPQRHDLSPPQKRMRRDWDDHGSDPYHSGYDLPYSSSAGGPGYGPPQPWGHPE 119
Query: 169 GYEREMGGRPGYGDERPHGRFAGRSSGGYQSGPSEWDSSRGGYGDASNTGSTQREGLMSY 228
+ + G P +R G + G T + ++
Sbjct: 120 MHVLQHHGIPI--------------------------QARLGNLHQVDLG-TPAPIMKTF 152
Query: 229 KQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSF 277
K+F+ LED + EA +RY +YK ++ Q + FF AHKDEEW+ S +
Sbjct: 153 KEFLLSLEDTVDETEAVKRYNDYKIDFRRQQMQEFFLAHKDEEWFRSKY 201
>sp|A4IFB1|SRRT_BOVIN Serrate RNA effector molecule homolog OS=Bos taurus GN=SRRT PE=2
SV=1
Length = 876
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 455 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITNNGA-EWEKK 507
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 606 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 665
Query: 508 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 567
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 666 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 723
Query: 568 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 608
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 724 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 761
Score = 50.4 bits (119), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSF 277
+ ++K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW+ S +
Sbjct: 149 MKTFKEFLLSLDDAVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKY 201
>sp|Q5R539|SRRT_PONAB Serrate RNA effector molecule homolog OS=Pongo abelii GN=SRRT PE=2
SV=1
Length = 871
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 455 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITNNGA-EWEKK 507
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 605 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 664
Query: 508 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 567
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 665 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 722
Query: 568 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 608
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 723 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 760
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSF 277
+ ++K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW+ S +
Sbjct: 149 MKTFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKY 201
>sp|Q9BXP5|SRRT_HUMAN Serrate RNA effector molecule homolog OS=Homo sapiens GN=SRRT PE=1
SV=1
Length = 876
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 455 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITNNGA-EWEKK 507
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 606 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 665
Query: 508 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 567
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 666 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 723
Query: 568 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 608
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 724 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 761
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSF 277
+ ++K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW+ S +
Sbjct: 149 MKTFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKY 201
>sp|Q99MR6|SRRT_MOUSE Serrate RNA effector molecule homolog OS=Mus musculus GN=Srrt PE=1
SV=1
Length = 875
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/161 (26%), Positives = 69/161 (42%), Gaps = 12/161 (7%)
Query: 455 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAEGKSSDITNNGA-EWEKK 507
+++LD L+ YL +H +DYY E G+ HVR + I++ EW+K
Sbjct: 605 IKVLDKLLLYLRIVHSLDYYNTCEYPNEDEMPNRCGIIHVRGPMPPNRISHGEVLEWQKT 664
Query: 508 LDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKGCTKLFH 567
+ + L ++ L A+ ++ FV E K+ C G K F
Sbjct: 665 FEEKLTPLLSVRESLSEEEAQKMGRKDPEQEVEKFVTSNTQELGKDKWLCPLSG--KKFK 722
Query: 568 AAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAPG 608
EFV KH+ KH E + E+ +V +F N++ D P
Sbjct: 723 GPEFVRKHIFNKHAEKIEEVKKEV---AFFNNFLTDAKRPA 760
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 35/53 (66%)
Query: 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSF 277
+ S+K+F+ L+D + EA +RY +YK ++ Q + FF AHKDEEW+ S +
Sbjct: 149 MKSFKEFLLSLDDSVDETEAVKRYNDYKLDFRRQQMQDFFLAHKDEEWFRSKY 201
>sp|Q66I22|SRRT_DANRE Serrate RNA effector molecule homolog OS=Danio rerio GN=srrt PE=2
SV=1
Length = 896
Score = 51.6 bits (122), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 76/166 (45%), Gaps = 24/166 (14%)
Query: 455 VELLDTLITYLWRIHGVDYYGMVET-SEAK-----GLRHVRAEGKSSDIT-NNGAEWEKK 507
V++LD L+ YL +H +DYY E SE + G+ HVR + IT ++W+K
Sbjct: 637 VKVLDRLLFYLRIVHSIDYYNTCEYPSEDEMPNRCGIIHVRGPIPPNRITLREVSDWQKT 696
Query: 508 LD------FRWQERLRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKYGWKYGCGAKG 561
+ F +E L S+D M KD ++ FV E K+ C G
Sbjct: 697 FEEKMGPLFSVKENL-SEDEAAKMGRKD-----PEQEVEKFVVANTQELGKDKWLCPLSG 750
Query: 562 CTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
K F EFV KH+ KH + + E+ +V ++F N++ D P
Sbjct: 751 --KKFKGPEFVRKHILNKHGDKIEEVKKEV---VFFNNFLMDAKRP 791
>sp|A8XEG9|SRRT_CAEBR Serrate RNA effector molecule homolog OS=Caenorhabditis briggsae
GN=CBG12064 PE=3 SV=1
Length = 715
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 33/49 (67%)
Query: 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWY 273
L+ +K+F+ EDDI +A ++Y EYK+E+ Q FF AHKDEEW+
Sbjct: 88 LLPFKRFLTNQEDDISEEDAIKKYNEYKNEHRKFQLDRFFRAHKDEEWF 136
Score = 41.6 bits (96), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 74/176 (42%), Gaps = 33/176 (18%)
Query: 455 VELLDTLITYLWRIHGVDYYGMVETSEAK------GLRHVRAE---GKSSDITNNG---- 501
++ LD LI YL +H +D+Y ++ GL HVR + G S + NG
Sbjct: 460 LKALDLLIIYLRIVHSIDFYNHGHYAQEDSMPNRCGLIHVRGQPPSGASINTDENGDLIV 519
Query: 502 ---------AEWEKKLDFRWQER-LRSQDPLEIMTAKDKIDAAAVDALDPFVRKIRDEKY 551
+ + ++D E+ S++ +E M KD ++ F+ E
Sbjct: 520 PQKFINDFISGFNSRIDKGLIEKQYVSEEDMEKMGKKD-----GEKEVEAFIAINTVELA 574
Query: 552 GWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPDAP 607
K+ C G K F EF+ KHL+ KH + + E + E +F NY+ D P
Sbjct: 575 KDKWLCPLSG--KKFKGPEFIRKHLQSKHEDKLEEARA---EADFFNNYLADAQRP 625
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 364,465,412
Number of Sequences: 539616
Number of extensions: 19937106
Number of successful extensions: 159124
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 832
Number of HSP's successfully gapped in prelim test: 1741
Number of HSP's that attempted gapping in prelim test: 86281
Number of HSP's gapped (non-prelim): 49758
length of query: 790
length of database: 191,569,459
effective HSP length: 126
effective length of query: 664
effective length of database: 123,577,843
effective search space: 82055687752
effective search space used: 82055687752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)