Query 003865
Match_columns 790
No_of_seqs 159 out of 200
Neff 3.7
Searched_HMMs 29240
Date Mon Mar 25 06:33:40 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003865.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003865hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ax1_A Serrate RNA effector mo 100.0 1E-99 4E-104 808.3 27.0 354 224-605 1-355 (358)
2 2d9h_A Zinc finger protein 692 84.8 0.77 2.6E-05 36.7 3.8 43 539-583 23-65 (78)
3 2adr_A ADR1; transcription reg 84.5 0.29 9.8E-06 37.2 1.0 42 538-584 17-58 (60)
4 1x5w_A Zinc finger protein 64, 82.1 0.62 2.1E-05 36.6 2.1 40 539-583 25-64 (70)
5 1bbo_A Human enhancer-binding 82.1 0.85 2.9E-05 34.0 2.8 40 538-582 16-55 (57)
6 2yt9_A Zinc finger-containing 81.3 1.5 5.1E-05 35.9 4.2 42 538-582 50-91 (95)
7 2lv2_A Insulinoma-associated p 81.3 0.95 3.2E-05 38.9 3.1 40 538-582 43-82 (85)
8 1klr_A Zinc finger Y-chromosom 80.8 0.79 2.7E-05 29.1 1.9 26 555-582 3-28 (30)
9 1paa_A Yeast transcription fac 79.8 1.1 3.9E-05 28.7 2.5 26 554-581 2-27 (30)
10 1znf_A 31ST zinc finger from X 79.2 1.2 4.2E-05 27.9 2.4 23 555-579 2-24 (27)
11 2gqj_A Zinc finger protein KIA 78.0 1.1 3.7E-05 38.0 2.4 27 554-582 54-80 (98)
12 2ct1_A Transcriptional repress 77.6 1.9 6.6E-05 34.3 3.7 27 554-582 45-71 (77)
13 3uk3_C Zinc finger protein 217 77.0 2.3 7.9E-05 31.6 3.8 38 538-580 19-56 (57)
14 2elx_A Zinc finger protein 406 76.6 1.1 3.9E-05 29.8 1.8 27 554-582 7-33 (35)
15 1sp2_A SP1F2; zinc finger, tra 75.7 1.5 5.1E-05 28.7 2.1 28 554-581 2-29 (31)
16 3mjh_B Early endosome antigen 75.7 1.1 3.9E-05 33.6 1.7 27 554-582 5-31 (34)
17 1zfd_A SWI5; DNA binding motif 75.6 1.7 5.8E-05 28.6 2.4 26 554-579 3-28 (32)
18 1ard_A Yeast transcription fac 75.5 1.4 4.9E-05 27.8 2.0 26 554-581 2-27 (29)
19 1x6e_A Zinc finger protein 24; 74.8 2 6.8E-05 33.9 3.0 38 538-580 29-66 (72)
20 2elo_A Zinc finger protein 406 73.7 1.3 4.3E-05 30.2 1.4 27 554-582 9-35 (37)
21 2dlq_A GLI-kruppel family memb 73.7 2.3 7.8E-05 36.2 3.3 40 538-582 81-120 (124)
22 1bhi_A CRE-BP1, ATF-2; CRE bin 73.7 1.4 4.9E-05 30.2 1.7 25 554-578 6-30 (38)
23 1p7a_A BF3, BKLF, kruppel-like 73.1 2.1 7.2E-05 29.0 2.4 25 554-580 11-35 (37)
24 2lce_A B-cell lymphoma 6 prote 72.9 2.3 7.9E-05 33.6 3.0 40 538-582 32-71 (74)
25 1va1_A Transcription factor SP 72.9 1.4 4.7E-05 30.5 1.5 25 554-578 8-32 (37)
26 3iuf_A Zinc finger protein UBI 72.6 1.6 5.6E-05 32.3 1.9 27 554-582 7-33 (48)
27 2m0d_A Zinc finger and BTB dom 72.3 1.5 5E-05 27.8 1.4 26 554-581 3-28 (30)
28 2elr_A Zinc finger protein 406 71.1 2.1 7E-05 28.8 2.0 26 554-581 9-34 (36)
29 2m0e_A Zinc finger and BTB dom 71.0 1.6 5.6E-05 27.3 1.4 26 554-581 2-27 (29)
30 2elm_A Zinc finger protein 406 70.7 1.1 3.8E-05 31.0 0.6 27 554-582 9-35 (37)
31 1rik_A E6APC1 peptide; E6-bind 70.6 1.7 5.7E-05 27.6 1.4 24 554-579 2-25 (29)
32 2drp_A Protein (tramtrack DNA- 70.5 3.1 0.00011 31.9 3.2 27 553-581 39-65 (66)
33 2djr_A Zinc finger BED domain- 70.4 2.5 8.4E-05 36.7 2.8 32 553-586 27-65 (76)
34 1x6h_A Transcriptional repress 69.6 3.5 0.00012 32.9 3.3 27 554-582 47-73 (86)
35 2dlk_A Novel protein; ZF-C2H2 69.3 3.4 0.00011 32.7 3.2 40 538-580 24-64 (79)
36 2dmd_A Zinc finger protein 64, 68.4 3 0.0001 34.1 2.8 40 538-582 51-90 (96)
37 2elv_A Zinc finger protein 406 68.0 2.3 7.8E-05 28.8 1.7 23 554-578 9-31 (36)
38 1rim_A E6APC2 peptide; E6-bind 67.4 3.1 0.00011 28.1 2.3 24 554-579 2-25 (33)
39 2lvt_A Zinc finger and BTB dom 70.7 1.1 3.8E-05 28.7 0.0 25 555-581 3-27 (29)
40 1srk_A Zinc finger protein ZFP 67.2 2.4 8.1E-05 28.4 1.6 25 554-580 7-31 (35)
41 2ct5_A Zinc finger BED domain 67.0 3.8 0.00013 35.2 3.2 34 553-588 28-64 (73)
42 2els_A Zinc finger protein 406 66.7 2.2 7.4E-05 28.9 1.4 25 554-580 9-33 (36)
43 2m0f_A Zinc finger and BTB dom 66.4 2 6.8E-05 27.0 1.1 24 554-579 2-25 (29)
44 1a1h_A QGSR zinc finger peptid 66.1 5.1 0.00017 32.2 3.7 39 539-582 50-88 (90)
45 2kvg_A Zinc finger and BTB dom 65.9 2.5 8.6E-05 27.0 1.5 23 554-578 3-25 (27)
46 2lvr_A Zinc finger and BTB dom 69.2 1.3 4.3E-05 28.3 0.0 27 554-582 3-29 (30)
47 2kvh_A Zinc finger and BTB dom 65.4 3.1 0.00011 26.2 1.8 23 554-578 3-25 (27)
48 2ctd_A Zinc finger protein 512 65.2 4.2 0.00014 34.9 3.2 39 538-582 50-88 (96)
49 2ep1_A Zinc finger protein 484 65.2 3.4 0.00012 29.4 2.3 26 554-581 12-37 (46)
50 2eom_A ZFP-95, zinc finger pro 64.8 3.1 0.00011 29.9 2.0 26 554-581 12-37 (46)
51 2cot_A Zinc finger protein 435 64.7 3 0.0001 33.2 2.0 39 539-582 34-72 (77)
52 2elt_A Zinc finger protein 406 64.6 2.6 8.8E-05 28.3 1.4 24 554-579 9-32 (36)
53 2en7_A Zinc finger protein 268 64.5 3.1 0.00011 29.3 1.9 24 554-579 12-35 (44)
54 1ubd_C Protein (YY1 zinc finge 64.4 5.3 0.00018 34.1 3.7 43 538-583 79-121 (124)
55 2elq_A Zinc finger protein 406 64.3 2.9 0.0001 28.2 1.7 25 554-580 9-33 (36)
56 1ncs_A Peptide M30F, transcrip 64.0 2.5 8.7E-05 31.0 1.4 26 554-579 18-43 (47)
57 2ab3_A ZNF29; zinc finger prot 63.6 3.6 0.00012 25.9 1.9 25 554-578 2-26 (29)
58 2csh_A Zinc finger protein 297 63.6 4.4 0.00015 34.2 3.0 42 539-585 53-94 (110)
59 2emi_A Zinc finger protein 484 63.5 3 0.0001 29.9 1.7 26 554-581 12-37 (46)
60 2epx_A Zinc finger protein 28 63.1 4.4 0.00015 28.9 2.5 26 554-581 12-37 (47)
61 2dlk_A Novel protein; ZF-C2H2 63.0 3.6 0.00012 32.5 2.2 29 554-582 7-35 (79)
62 2eq2_A Zinc finger protein 347 62.7 3.6 0.00012 29.4 2.0 25 554-580 12-36 (46)
63 2emg_A Zinc finger protein 484 62.5 3.6 0.00012 29.4 1.9 25 554-580 12-36 (46)
64 2eq1_A Zinc finger protein 347 62.4 3.5 0.00012 29.5 1.9 25 554-580 12-36 (46)
65 1zw8_A Zinc-responsive transcr 62.3 4.7 0.00016 32.9 2.8 27 555-581 2-28 (64)
66 2eln_A Zinc finger protein 406 62.1 3.8 0.00013 30.2 2.0 25 554-578 9-33 (38)
67 2ept_A Zinc finger protein 32; 62.1 2.8 9.7E-05 29.2 1.3 25 554-580 10-34 (41)
68 2yrm_A B-cell lymphoma 6 prote 61.8 4.5 0.00015 28.8 2.3 27 554-582 10-36 (43)
69 1llm_C Chimera of ZIF23-GCN4; 61.8 8.8 0.0003 31.2 4.4 41 538-583 18-58 (88)
70 2epu_A Zinc finger protein 32; 61.6 2.7 9.1E-05 30.1 1.1 25 554-580 12-36 (45)
71 2en9_A Zinc finger protein 28 61.5 3.9 0.00013 29.3 2.0 24 554-579 12-35 (46)
72 2eoz_A Zinc finger protein 473 61.4 2.8 9.4E-05 30.1 1.1 26 554-581 12-37 (46)
73 2eoh_A Zinc finger protein 28 61.2 3.8 0.00013 29.4 1.9 24 554-579 12-35 (46)
74 2enh_A Zinc finger protein 28 61.1 3.7 0.00013 29.4 1.8 24 554-579 12-35 (46)
75 2epa_A Krueppel-like factor 10 61.1 6.4 0.00022 30.7 3.3 36 539-577 35-70 (72)
76 2epa_A Krueppel-like factor 10 61.0 3.5 0.00012 32.3 1.7 30 553-582 16-45 (72)
77 2gli_A Protein (five-finger GL 61.0 4.5 0.00016 35.9 2.7 41 538-581 114-155 (155)
78 2enf_A Zinc finger protein 347 60.9 4.3 0.00015 29.0 2.1 25 554-580 12-36 (46)
79 2ct1_A Transcriptional repress 60.9 3.4 0.00012 32.9 1.7 27 554-582 15-41 (77)
80 2yth_A Zinc finger protein 224 60.7 4.5 0.00015 29.0 2.2 25 554-580 12-36 (46)
81 2eop_A Zinc finger protein 268 60.7 4.3 0.00015 28.9 2.1 24 554-579 12-35 (46)
82 2kvf_A Zinc finger and BTB dom 60.5 4.1 0.00014 25.7 1.7 23 554-578 3-25 (28)
83 2ytr_A Zinc finger protein 347 60.5 4.2 0.00014 28.9 2.0 24 554-579 12-35 (46)
84 2emk_A Zinc finger protein 28 60.2 4.3 0.00015 29.1 2.0 25 554-580 12-36 (46)
85 2epz_A Zinc finger protein 28 60.1 4.4 0.00015 29.0 2.0 25 554-580 12-36 (46)
86 2ytp_A Zinc finger protein 484 60.1 3.3 0.00011 29.7 1.4 25 554-580 12-36 (46)
87 2ytt_A Zinc finger protein 473 60.1 3.7 0.00013 29.5 1.6 23 554-578 12-34 (46)
88 2el5_A Zinc finger protein 268 60.0 3.8 0.00013 28.6 1.6 26 554-581 10-35 (42)
89 2eq4_A Zinc finger protein 224 59.8 4.2 0.00014 28.9 1.9 25 554-580 12-36 (46)
90 2yte_A Zinc finger protein 473 59.6 4.5 0.00015 28.1 2.0 23 554-578 10-32 (42)
91 2ebt_A Krueppel-like factor 5; 59.6 9.1 0.00031 31.3 4.1 35 539-578 63-97 (100)
92 2ep3_A Zinc finger protein 484 59.5 3.6 0.00012 29.4 1.5 25 554-580 12-36 (46)
93 2em6_A Zinc finger protein 224 59.4 4.5 0.00015 29.0 2.0 24 554-579 12-35 (46)
94 2eov_A Zinc finger protein 484 59.3 4.6 0.00016 28.8 2.0 25 554-580 12-36 (46)
95 2ytf_A Zinc finger protein 268 59.3 3.5 0.00012 29.4 1.4 26 554-581 12-37 (46)
96 2epv_A Zinc finger protein 268 59.3 4 0.00014 29.1 1.7 25 554-580 12-36 (44)
97 2eos_A B-cell lymphoma 6 prote 59.3 4 0.00014 28.6 1.7 26 554-581 11-36 (42)
98 2yrj_A Zinc finger protein 473 59.1 3.6 0.00012 29.3 1.4 25 554-580 12-36 (46)
99 2eou_A Zinc finger protein 473 58.5 5 0.00017 28.5 2.1 24 554-579 12-35 (44)
100 2ytq_A Zinc finger protein 268 58.5 4.7 0.00016 28.9 2.0 24 554-579 12-35 (46)
101 2em4_A Zinc finger protein 28 58.5 3.9 0.00013 29.3 1.5 25 554-580 12-36 (46)
102 1njq_A Superman protein; zinc- 58.4 3.8 0.00013 28.3 1.4 26 554-581 6-31 (39)
103 2eq3_A Zinc finger protein 347 58.3 3.5 0.00012 29.4 1.2 24 554-579 12-35 (46)
104 2yti_A Zinc finger protein 347 58.2 4.7 0.00016 28.8 1.9 24 554-579 12-35 (46)
105 2em3_A Zinc finger protein 28 58.2 3.8 0.00013 29.3 1.4 25 554-580 12-36 (46)
106 2epc_A Zinc finger protein 32; 58.0 3.8 0.00013 28.5 1.4 24 554-579 11-34 (42)
107 2eon_A ZFP-95, zinc finger pro 58.0 4.2 0.00014 29.3 1.6 23 554-578 12-34 (46)
108 2eml_A Zinc finger protein 28 57.7 4.4 0.00015 29.0 1.7 26 554-581 12-37 (46)
109 2kmk_A Zinc finger protein GFI 57.7 9.5 0.00033 29.9 3.8 36 539-579 45-80 (82)
110 2gqj_A Zinc finger protein KIA 57.6 6.3 0.00021 33.2 2.9 36 541-581 14-50 (98)
111 2em0_A Zinc finger protein 224 57.6 5.3 0.00018 28.5 2.1 24 554-579 12-35 (46)
112 1f2i_G Fusion of N-terminal 17 57.4 8.7 0.0003 29.9 3.5 35 539-578 37-71 (73)
113 2kmk_A Zinc finger protein GFI 57.4 6.8 0.00023 30.8 2.9 40 538-582 16-55 (82)
114 2ytn_A Zinc finger protein 347 57.3 5.1 0.00017 28.6 2.0 25 554-580 12-36 (46)
115 2emf_A Zinc finger protein 484 57.1 4.2 0.00014 29.2 1.5 25 554-580 12-36 (46)
116 2eof_A Zinc finger protein 268 57.0 4.4 0.00015 28.5 1.6 24 554-579 12-35 (44)
117 2emm_A ZFP-95, zinc finger pro 57.0 4.1 0.00014 29.0 1.4 25 554-580 12-36 (46)
118 2eow_A Zinc finger protein 347 56.9 4.1 0.00014 29.0 1.4 25 554-580 12-36 (46)
119 2elp_A Zinc finger protein 406 56.9 3.6 0.00012 28.0 1.0 23 554-578 9-32 (37)
120 2emj_A Zinc finger protein 28 56.9 4.4 0.00015 29.0 1.6 24 554-579 12-35 (46)
121 2elz_A Zinc finger protein 224 56.7 5.3 0.00018 28.6 2.0 24 554-579 12-35 (46)
122 2emy_A Zinc finger protein 268 56.5 4.5 0.00015 28.9 1.6 25 554-580 12-36 (46)
123 2em5_A ZFP-95, zinc finger pro 56.3 4.2 0.00014 29.1 1.4 23 554-578 12-34 (46)
124 2yto_A Zinc finger protein 484 56.2 4.2 0.00014 29.1 1.4 24 554-579 12-35 (46)
125 2ee8_A Protein ODD-skipped-rel 56.1 8.5 0.00029 32.0 3.5 26 554-581 73-98 (106)
126 2eps_A POZ-, at HOOK-, and zin 56.1 5.4 0.00018 29.9 2.0 26 554-581 12-37 (54)
127 2em7_A Zinc finger protein 224 55.8 4.8 0.00016 28.7 1.6 25 554-580 12-36 (46)
128 2ebt_A Krueppel-like factor 5; 55.6 8.1 0.00028 31.6 3.2 42 538-582 32-73 (100)
129 2ep0_A Zinc finger protein 28 55.6 4.5 0.00015 28.9 1.4 24 554-579 12-35 (46)
130 2ene_A Zinc finger protein 347 55.6 4.3 0.00015 29.0 1.3 24 554-579 12-35 (46)
131 2ee8_A Protein ODD-skipped-rel 55.6 6.5 0.00022 32.8 2.6 39 539-582 33-71 (106)
132 2emx_A Zinc finger protein 268 55.6 4.6 0.00016 28.6 1.5 24 554-579 10-33 (44)
133 2ytb_A Zinc finger protein 32; 55.6 3.7 0.00013 28.6 0.9 25 554-580 11-35 (42)
134 2eor_A Zinc finger protein 224 55.6 3.7 0.00012 29.3 0.9 23 554-578 12-34 (46)
135 2yts_A Zinc finger protein 484 55.6 4.5 0.00015 28.8 1.4 23 554-578 12-34 (46)
136 2csh_A Zinc finger protein 297 55.5 7 0.00024 32.9 2.9 40 538-582 24-63 (110)
137 2el4_A Zinc finger protein 268 55.5 4.4 0.00015 28.9 1.4 24 554-579 12-35 (46)
138 2wbt_A B-129; zinc finger; 2.7 55.2 4 0.00014 35.5 1.3 29 554-584 100-128 (129)
139 2eoj_A Zinc finger protein 268 55.2 4.4 0.00015 28.6 1.3 24 554-579 12-35 (44)
140 2el6_A Zinc finger protein 268 55.2 5.1 0.00017 28.7 1.7 25 554-580 12-36 (46)
141 1wjp_A Zinc finger protein 295 55.2 7.2 0.00024 32.8 2.9 27 554-582 69-95 (107)
142 2ytj_A Zinc finger protein 484 55.2 4.6 0.00016 28.9 1.4 24 554-579 12-35 (46)
143 2ema_A Zinc finger protein 347 55.1 4.6 0.00016 28.9 1.4 24 554-579 12-35 (46)
144 2eoq_A Zinc finger protein 224 55.0 5.7 0.0002 28.3 1.9 24 554-579 12-35 (46)
145 2eq0_A Zinc finger protein 347 54.8 4.5 0.00015 28.9 1.3 25 554-580 12-36 (46)
146 2ytk_A Zinc finger protein 347 54.7 4.9 0.00017 28.7 1.5 25 554-580 12-36 (46)
147 3uk3_C Zinc finger protein 217 54.7 4.8 0.00016 29.8 1.5 25 554-580 4-28 (57)
148 1bbo_A Human enhancer-binding 54.4 6.1 0.00021 29.2 2.0 26 554-581 1-26 (57)
149 2emh_A Zinc finger protein 484 54.4 4 0.00014 29.2 1.0 23 554-578 12-34 (46)
150 2epq_A POZ-, at HOOK-, and zin 54.4 4.8 0.00016 28.7 1.4 26 554-581 10-35 (45)
151 2en6_A Zinc finger protein 268 54.4 4.3 0.00015 29.0 1.1 25 554-580 12-36 (46)
152 2ytm_A Zinc finger protein 28 54.3 5 0.00017 28.8 1.5 23 554-578 12-34 (46)
153 2yt9_A Zinc finger-containing 54.2 7.6 0.00026 31.6 2.8 39 539-582 23-61 (95)
154 2en3_A ZFP-95, zinc finger pro 54.2 4.3 0.00015 29.0 1.1 23 554-578 12-34 (46)
155 2dmd_A Zinc finger protein 64, 54.1 5.6 0.00019 32.4 2.0 39 539-582 24-62 (96)
156 2eme_A Zinc finger protein 473 54.0 5.4 0.00019 28.4 1.7 25 554-580 12-36 (46)
157 2emp_A Zinc finger protein 347 54.0 4 0.00014 29.1 1.0 23 554-578 12-34 (46)
158 1yui_A GAGA-factor; complex (D 54.0 5 0.00017 30.0 1.5 27 554-582 24-50 (54)
159 2ely_A Zinc finger protein 224 53.9 6.2 0.00021 28.2 1.9 25 554-580 12-36 (46)
160 2em9_A Zinc finger protein 224 53.8 5.1 0.00018 28.5 1.5 24 554-579 12-35 (46)
161 2eoe_A Zinc finger protein 347 53.6 5.5 0.00019 28.3 1.6 25 554-580 12-36 (46)
162 2emz_A ZFP-95, zinc finger pro 53.6 6.6 0.00022 28.1 2.1 23 554-578 12-34 (46)
163 2dmi_A Teashirt homolog 3; zin 53.5 7 0.00024 33.1 2.5 27 554-582 80-106 (115)
164 2j7j_A Transcription factor II 53.3 11 0.00037 29.7 3.5 25 554-578 31-55 (85)
165 2yu5_A Zinc finger protein 473 53.2 4.8 0.00016 28.5 1.2 25 554-580 12-36 (44)
166 2j7j_A Transcription factor II 52.8 12 0.00041 29.4 3.7 37 538-580 48-85 (85)
167 2ep2_A Zinc finger protein 484 52.4 5.5 0.00019 28.4 1.5 25 554-580 12-36 (46)
168 2em2_A Zinc finger protein 28 52.4 5.4 0.00018 28.6 1.4 25 554-580 12-36 (46)
169 2emb_A Zinc finger protein 473 52.3 5.6 0.00019 28.1 1.5 24 554-579 12-35 (44)
170 2lvu_A Zinc finger and BTB dom 57.6 3 0.0001 26.1 0.0 23 554-578 2-24 (26)
171 1a1h_A QGSR zinc finger peptid 52.2 8.2 0.00028 30.9 2.7 39 538-581 21-59 (90)
172 2rpc_A Zinc finger protein ZIC 52.2 5.6 0.00019 35.5 1.8 42 538-582 107-148 (155)
173 1x3c_A Zinc finger protein 292 51.9 8.7 0.0003 33.4 2.8 28 554-581 27-54 (73)
174 2drp_A Protein (tramtrack DNA- 51.8 6.8 0.00023 29.9 2.0 25 554-580 10-34 (66)
175 2wbs_A Krueppel-like factor 4; 51.8 12 0.00041 29.9 3.6 35 539-578 53-87 (89)
176 2adr_A ADR1; transcription reg 51.7 7 0.00024 29.3 2.0 26 554-581 2-27 (60)
177 1f2i_G Fusion of N-terminal 17 51.4 4.9 0.00017 31.4 1.1 26 554-579 19-44 (73)
178 2eoo_A ZFP-95, zinc finger pro 51.4 5.5 0.00019 28.5 1.3 23 554-578 12-34 (46)
179 2eoy_A Zinc finger protein 473 50.9 5.8 0.0002 28.4 1.4 23 554-578 12-34 (46)
180 2eox_A Zinc finger protein 473 50.6 3.3 0.00011 29.4 -0.0 25 554-580 12-36 (44)
181 2en8_A Zinc finger protein 224 50.6 5.8 0.0002 28.2 1.3 25 554-580 12-36 (46)
182 2ysp_A Zinc finger protein 224 50.1 5.1 0.00018 28.6 1.0 24 554-579 12-35 (46)
183 2yso_A ZFP-95, zinc finger pro 49.6 6.4 0.00022 28.1 1.4 25 554-580 12-36 (46)
184 2en1_A Zinc finger protein 224 49.5 5.8 0.0002 28.3 1.2 25 554-580 12-36 (46)
185 2jp9_A Wilms tumor 1; DNA bind 49.3 10 0.00036 31.8 3.0 36 538-578 53-88 (119)
186 2wbs_A Krueppel-like factor 4; 49.0 7.2 0.00025 31.2 1.8 25 554-578 5-29 (89)
187 2ent_A Krueppel-like factor 15 48.8 6.6 0.00023 28.1 1.4 25 554-578 12-36 (48)
188 2lce_A B-cell lymphoma 6 prote 48.7 8 0.00027 30.4 2.0 28 553-582 16-43 (74)
189 2ytd_A Zinc finger protein 473 48.4 6.7 0.00023 27.9 1.4 24 554-579 12-35 (46)
190 2lt7_A Transcriptional regulat 48.0 12 0.00041 34.0 3.4 40 539-583 66-105 (133)
191 2ytg_A ZFP-95, zinc finger pro 47.7 4.6 0.00016 28.8 0.4 25 554-580 12-36 (46)
192 1zw8_A Zinc-responsive transcr 47.6 17 0.00057 29.6 3.8 28 553-580 37-64 (64)
193 2epw_A Zinc finger protein 268 47.0 6.9 0.00023 27.8 1.2 23 554-578 12-34 (46)
194 2em8_A Zinc finger protein 224 46.8 6.1 0.00021 28.3 0.9 23 554-578 12-34 (46)
195 2enc_A Zinc finger protein 224 46.8 7.3 0.00025 27.8 1.4 23 554-578 12-34 (46)
196 2epr_A POZ-, at HOOK-, and zin 46.7 6.3 0.00022 28.6 1.0 25 554-580 12-36 (48)
197 1x6h_A Transcriptional repress 46.5 8 0.00027 30.8 1.7 27 554-582 15-41 (86)
198 2dlq_A GLI-kruppel family memb 46.5 12 0.00042 31.5 3.0 28 553-582 65-92 (124)
199 1x5w_A Zinc finger protein 64, 46.4 8 0.00028 30.1 1.7 27 554-582 9-35 (70)
200 2en2_A B-cell lymphoma 6 prote 45.8 5.7 0.00019 27.7 0.6 23 554-578 11-33 (42)
201 1x6e_A Zinc finger protein 24; 45.7 7.8 0.00027 30.4 1.5 26 554-581 14-39 (72)
202 2gli_A Protein (five-finger GL 44.5 13 0.00044 32.9 2.9 42 538-582 84-125 (155)
203 2lv2_A Insulinoma-associated p 44.1 8.2 0.00028 33.0 1.5 28 553-582 27-54 (85)
204 3foz_A TRNA delta(2)-isopenten 43.4 25 0.00086 37.5 5.4 47 225-272 248-294 (316)
205 2rpc_A Zinc finger protein ZIC 42.9 15 0.00051 32.7 3.1 39 541-582 80-118 (155)
206 2jp9_A Wilms tumor 1; DNA bind 42.7 14 0.00049 31.0 2.8 39 537-578 80-118 (119)
207 2ghf_A ZHX1, zinc fingers and 42.4 13 0.00044 32.9 2.5 26 554-581 50-75 (102)
208 1ubd_C Protein (YY1 zinc finge 42.2 11 0.00038 32.1 2.0 27 554-580 62-88 (124)
209 2epp_A POZ-, at HOOK-, and zin 42.0 14 0.00048 30.5 2.5 26 554-581 13-38 (66)
210 2ej4_A Zinc finger protein ZIC 41.6 15 0.0005 30.0 2.6 27 554-582 25-51 (95)
211 2yu8_A Zinc finger protein 347 41.1 7.2 0.00025 27.8 0.6 23 554-578 12-34 (46)
212 2i13_A AART; DNA binding, zinc 40.4 19 0.00064 33.2 3.4 40 538-582 148-187 (190)
213 2ej4_A Zinc finger protein ZIC 39.9 19 0.00065 29.3 3.0 22 555-578 63-84 (95)
214 4gzn_C ZFP-57, zinc finger pro 38.1 23 0.00078 28.3 3.1 38 538-581 19-56 (60)
215 2cot_A Zinc finger protein 435 37.9 15 0.0005 29.1 2.0 27 553-581 17-43 (77)
216 2jsp_A Transcriptional regulat 37.3 15 0.00053 32.7 2.2 32 553-589 20-51 (87)
217 2d9h_A Zinc finger protein 692 36.4 15 0.0005 29.1 1.8 26 554-581 7-32 (78)
218 2ctd_A Zinc finger protein 512 35.3 26 0.0009 29.8 3.3 23 554-578 34-57 (96)
219 2kfq_A FP1; protein, de novo p 34.7 2.9 0.0001 27.9 -2.3 22 555-578 3-24 (32)
220 1wir_A Protein arginine N-meth 33.2 30 0.001 32.3 3.5 48 553-602 14-65 (121)
221 4i1l_A Scurfin, forkhead box p 32.8 15 0.0005 33.3 1.3 26 556-581 14-39 (93)
222 2yrk_A Zinc finger homeobox pr 32.5 17 0.0006 30.0 1.6 30 554-585 13-43 (55)
223 3a8t_A Adenylate isopentenyltr 30.8 44 0.0015 35.9 4.8 47 225-272 231-294 (339)
224 1llm_C Chimera of ZIF23-GCN4; 29.5 16 0.00055 29.6 0.9 25 554-580 3-27 (88)
225 1zr9_A Zinc finger protein 593 28.5 19 0.00067 33.8 1.4 32 554-587 50-82 (124)
226 2kw6_A Cyclin-dependent kinase 28.1 30 0.001 29.5 2.3 25 388-412 34-60 (65)
227 1tf6_A Protein (transcription 27.7 37 0.0013 31.2 3.2 28 554-581 104-131 (190)
228 3exa_A TRNA delta(2)-isopenten 27.7 1.4E+02 0.0048 31.9 8.0 47 225-272 240-286 (322)
229 2i13_A AART; DNA binding, zinc 27.2 32 0.0011 31.6 2.7 39 538-581 120-158 (190)
230 2elu_A Zinc finger protein 406 27.2 36 0.0012 25.7 2.3 26 553-580 8-33 (37)
231 3crm_A TRNA delta(2)-isopenten 26.6 1.4E+02 0.0049 31.6 7.7 47 225-272 254-300 (323)
232 2eod_A TNF receptor-associated 25.7 23 0.00077 27.4 1.1 22 554-578 10-31 (66)
233 1fv5_A First zinc finger of U- 25.5 30 0.001 25.2 1.7 21 554-576 8-28 (36)
234 1tf6_A Protein (transcription 25.3 63 0.0021 29.7 4.2 41 538-581 59-99 (190)
235 3iax_B Colicin-A; TOLB, TOLB B 24.6 69 0.0024 29.3 4.1 30 163-197 3-32 (115)
236 4gzn_C ZFP-57, zinc finger pro 24.3 32 0.0011 27.4 1.8 23 554-578 4-26 (60)
237 3d3q_A TRNA delta(2)-isopenten 22.8 1.2E+02 0.0042 32.4 6.4 47 225-272 246-292 (340)
238 2eod_A TNF receptor-associated 22.5 56 0.0019 25.1 2.8 34 539-578 25-59 (66)
239 1x6f_A Zinc finger protein 462 22.2 37 0.0013 28.8 1.9 23 554-578 25-47 (88)
240 2m1l_A Cyclin-dependent kinase 21.2 47 0.0016 28.6 2.2 25 388-412 38-64 (69)
241 2wbt_A B-129; zinc finger; 2.7 21.1 40 0.0014 29.0 1.9 24 554-580 74-97 (129)
242 2dmi_A Teashirt homolog 3; zin 20.6 43 0.0015 28.2 2.0 23 554-578 19-41 (115)
No 1
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding; 2.74A {Arabidopsis thaliana}
Probab=100.00 E-value=1e-99 Score=808.33 Aligned_cols=354 Identities=77% Similarity=1.199 Sum_probs=286.8
Q ss_pred CCCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhhhhhhhccccchhhhhhhhhhcCC
Q 003865 224 GLMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEWYFSSFTLFLLCTLRCSYYMCFVCRLKDKYHP 303 (790)
Q Consensus 224 ~lmsFKQFl~~~~DdIspeEA~~rYqEYK~ef~~~Qi~~FFe~HKdEeW~~~~~~~~~~~~~~~~~~~~~~~~~~~KYhP 303 (790)
+||||||||++|+|+|||+||+++|++||++|+++|++.||++||+++| |++||||
T Consensus 1 glmsFKqFl~~~~D~isp~eA~~~Y~eYk~e~~~~q~~~FF~~HK~e~W------------------------freKY~P 56 (358)
T 3ax1_A 1 GLMSYKQFIQELEDDILPSEAERRYQEYKSEYITTQKRAFFNTHKEEDW------------------------LKNKYHP 56 (358)
T ss_dssp CCCCHHHHGGGTTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSHH------------------------HHHHHCH
T ss_pred CCcCHHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHH------------------------HHHhcCc
Confidence 5899999999999999999999999999999999999999999999999 9999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCCccCCCCCCCCCCCCccccCCCcccccCCCCCccccccccCC
Q 003865 304 TNLVAVIERRNDLARKVAKDFLLDLQSGTLDLGPSVNASSSNKLGQTSEPNSDDDVDNGGKRRRHGRGPAKETDLLSAAP 383 (790)
Q Consensus 304 ~~~~~~~~~r~~~~~~~ak~f~~~l~~G~ld~~p~v~a~~~~k~g~~sD~nsed~~~~~~kr~r~G~~~~k~~d~l~~aP 383 (790)
+++++++++|+++|++.|+.|+++|++|+||++|+++++ +++|.++|++++|+++.++|++++||++.+++|++++||
T Consensus 57 ~~l~~~~~~R~e~ak~~a~~F~~~L~~G~ld~~~~~~~~--~~~~~~~~~~~~d~~~~~~k~~~~g~~~~~~~d~~~~ap 134 (358)
T 3ax1_A 57 TNLLSVIERRNDLAQKVAKDFLLDLQSGTLDLGPAVTAL--NKSGRTSEPNSEDEAAGVGKRKRHGMGGAKENELLSAAP 134 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSBSSCC--C-----------------------------------CCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCccccc--cccCCCCCCChhhhhhccccccccCCCcccccchhhccc
Confidence 999999999999999999999999999999999888884 678888999999999988999999999999999999999
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHHHHhhhcCcccccccCCCCccccccccCC-CCCCeeeeccccccCCccchhhHHHHH
Q 003865 384 KAHPISSEPRRIQVDIEQAQALVRKLDSEKGITENILCGSDNDKMNREKSHG-STGPVIIIRGLTSVKGLEGVELLDTLI 462 (790)
Q Consensus 384 ka~Pi~S~peRI~kDLeQAr~LV~kLDaEkGIe~NpL~~~d~~k~d~eks~g-s~gPi~i~egl~eV~dle~~k~LDllI 462 (790)
++||+||+|+||++||+||++||++||+|+||++|+|+..+++.++.++++. ++||++|++++.++++|+++++||++|
T Consensus 135 ~~~P~~S~p~RI~~Dle~a~~Lv~kLD~e~gie~n~l~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~LD~~i 214 (358)
T 3ax1_A 135 KAPSFTSDPKRILTDVEQTQALVRKLDSEKKIEENVLQGSETEKSGREKLHSGSTGPVVIIRGLTSVKGLEGVELLDTLV 214 (358)
T ss_dssp BCCGGGSCHHHHHHHHHHHHHHHHHHHHHHTCCCCTTC---------------CCCCCEEECCSSCCEEECSHHHHHHHH
T ss_pred CCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCcccccccccccccccccccccCCCcchhhccccchhhhhhHHHHHHHH
Confidence 9999999999999999999999999999999999999998887777778775 899999999999999999999999999
Q ss_pred HHHHHHhhcccccccccccccccccccCCCCCCCCCcchhhhHHhhHHHHHHHhhcCChhhHhhhhhhHHHHHHHhhhHH
Q 003865 463 TYLWRIHGVDYYGMVETSEAKGLRHVRAEGKSSDITNNGAEWEKKLDFRWQERLRSQDPLEIMTAKDKIDAAAVDALDPF 542 (790)
Q Consensus 463 ~YLRrVHsvDYYc~~E~dercGi~HvR~~~~s~~~ts~~~eWeKklD~~~q~rL~~~d~le~l~gkekID~al~e~ve~f 542 (790)
+|||+||||||||++|++++||++|||++.++.+ .+..+|+++|+++|+.+|+.+++++.++|+++||++++++|++|
T Consensus 215 ~YLRrVH~~dYY~~~E~~~~~g~~HvR~~~~~~~--~~~~~we~~ld~~w~~~l~~~dp~~~~lg~k~ie~~~~e~l~~~ 292 (358)
T 3ax1_A 215 TYLWRVHGLDYYGKVETNEAKGLRHVRAEGKVSD--AKGDENESKFDSHWQERLKGQDPLEVMAAKEKIDAAATEALDPH 292 (358)
T ss_dssp HHHHHHHCEEGGGTEECTTCCSBCCBC------------CHHHHHHHHHHHHHHHSCCHHHHHHCHHHHHHHHHHHHGGG
T ss_pred HHHHHHHcccccceEeecCccccCeecCCCCCCC--CchhhHHHHHHHHHHHHHcccChHHHHhcCccHHHHHHHHHHHH
Confidence 9999999999999999999999999999876543 25678999999999999999999998989999999999999999
Q ss_pred HHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChhHHHHHHHHHHHHHHHhhhccCCC
Q 003865 543 VRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSKVREELYFQNYMNDPD 605 (790)
Q Consensus 543 Vkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E~Veev~~Kv~E~~yFnNYl~DP~ 605 (790)
|+|++||+|||||+|++++|+|||||+|||+|||+|||+|+|++++++|+|.+||+|||.--+
T Consensus 293 v~k~~dE~~gwK~~C~~~~C~KLFk~~eFV~KHi~~KH~e~v~~~~~~v~~~~~~~~~~~~~~ 355 (358)
T 3ax1_A 293 VRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHTELVTELTTKVREELYFQNYLEHHH 355 (358)
T ss_dssp EEEEECSSSSEEEEECSSSCCCEESSHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHhhcccccccCCCCCCcCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 999999999999999999999999999999999999999999999999999999999996433
No 2
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=84.82 E-value=0.77 Score=36.68 Aligned_cols=43 Identities=28% Similarity=0.451 Sum_probs=30.9
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChhH
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 583 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E~ 583 (790)
|..+++....+.....|.|.+ |+|.|....-+.+|++..|...
T Consensus 23 L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~ 65 (78)
T 2d9h_A 23 LNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPAL 65 (78)
T ss_dssp HHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTT
T ss_pred HHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCC
Confidence 344544443321123799986 9999999999999999999864
No 3
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=84.50 E-value=0.29 Score=37.15 Aligned_cols=42 Identities=24% Similarity=0.487 Sum_probs=32.0
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChhHH
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELV 584 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E~V 584 (790)
.|..+++..+.+ ..|.|.+ |+|.|....-+.+||...|...+
T Consensus 17 ~l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~~ 58 (60)
T 2adr_A 17 HLKRHYRSHTNE---KPYPCGL--CNRAFTRRDLLIRHAQKIHSGNL 58 (60)
T ss_dssp HHHHHHHTTTSS---CSEECTT--TCCEESSHHHHHHHHTTTSCCSS
T ss_pred HHHHHHHHhCCC---CCccCCC--CCCccCCHHHHHHHHHHHcCCcC
Confidence 345566654444 3689986 99999999999999999997643
No 4
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=82.11 E-value=0.62 Score=36.56 Aligned_cols=40 Identities=20% Similarity=0.286 Sum_probs=30.1
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChhH
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 583 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E~ 583 (790)
|..+++....+ ..|.|.+ |+|.|....-+.+|++..|.|+
T Consensus 25 L~~H~~~H~~~---~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~ 64 (70)
T 1x5w_A 25 LRIHERIHCTD---RPFKCNY--CSFDTKQPSNLSKHMKKFHGDM 64 (70)
T ss_dssp HHHHHGGGCCS---CSEECSS--SSCEESSHHHHHHHHHHHHSSS
T ss_pred HHHHHHHcCCC---CCEeCCC--CCCccCCHHHHHHHHHHHhCCC
Confidence 44555554433 2589986 9999999999999999887663
No 5
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=82.06 E-value=0.85 Score=34.02 Aligned_cols=40 Identities=28% Similarity=0.421 Sum_probs=30.8
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++....+ ..|.|.+ |+|.|....-+..|+...|.+
T Consensus 16 ~l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 55 (57)
T 1bbo_A 16 MLKKHIRTHTDV---RPYHCTY--CNFSFKTKGNLTKHMKSKAHS 55 (57)
T ss_dssp HHHHHHHHTSSC---CCEECSS--SSCEESSHHHHHHHHHSSSSC
T ss_pred HHHHHHHhcCCC---CCccCCC--CCchhcCHHHHHHHHHHhccc
Confidence 345566654443 3589986 999999999999999988765
No 6
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=81.31 E-value=1.5 Score=35.89 Aligned_cols=42 Identities=26% Similarity=0.443 Sum_probs=30.3
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++....+. ...|.|.+ |+|.|....-+.+||+..|..
T Consensus 50 ~l~~H~~~h~~~~-~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 91 (95)
T 2yt9_A 50 RMSYHVRSHDGSV-GKPYICQS--CGKGFSRPDHLNGHIKQVHSG 91 (95)
T ss_dssp HHHHHHHHHCCCC-CSSBCCSS--SCCCBSSHHHHHHHHHHTSCC
T ss_pred HHHHHHHHhcCCC-CCceECCC--ccchhCCHHHHHHHHHHhcCC
Confidence 3444555443321 13689986 999999999999999998864
No 7
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=81.26 E-value=0.95 Score=38.91 Aligned_cols=40 Identities=20% Similarity=0.428 Sum_probs=32.6
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++..+.| -.|.|.. |+|.|.....+.+||+..|++
T Consensus 43 ~L~~H~~~H~~~---k~~~C~~--C~k~F~~~~~L~~H~~~~H~~ 82 (85)
T 2lv2_A 43 AQERHLRLLHAA---QVFPCKY--CPATFYSSPGLTRHINKCHPS 82 (85)
T ss_dssp HHHHHHHTTSCS---SSEECTT--SSCEESSHHHHHHHHHTTCTT
T ss_pred HHhhhhhhccCC---CccCCCC--CCCEeCCHHHHHHhCcccCcC
Confidence 455677766555 2699986 999999999999999999975
No 8
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=80.81 E-value=0.79 Score=29.11 Aligned_cols=26 Identities=27% Similarity=0.505 Sum_probs=22.6
Q ss_pred cccCCCCCcccccchhhHHHHHhhhChh
Q 003865 555 YGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 555 wrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
|.|.. |+|.|....-+..|+..-|.+
T Consensus 3 ~~C~~--C~k~f~~~~~l~~H~~~h~~~ 28 (30)
T 1klr_A 3 YQCQY--CEFRSADSSNLKTHIKTKHSK 28 (30)
T ss_dssp CCCSS--SSCCCSCSHHHHHHHHHHTSS
T ss_pred ccCCC--CCCccCCHHHHHHHHHHHccC
Confidence 68985 999999999999999886654
No 9
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=79.75 E-value=1.1 Score=28.66 Aligned_cols=26 Identities=27% Similarity=0.760 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.. |+|.|.....+..|+...|.
T Consensus 2 ~~~C~~--C~k~f~~~~~l~~H~~~~H~ 27 (30)
T 1paa_A 2 AYACGL--CNRAFTRRDLLIRHAQKIHS 27 (30)
T ss_dssp CSBCTT--TCCBCSSSHHHHHHHTTTSC
T ss_pred CcCCcc--cCcccCChHHHHHHHHHHcc
Confidence 368985 99999999999999766674
No 10
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=79.22 E-value=1.2 Score=27.88 Aligned_cols=23 Identities=26% Similarity=0.752 Sum_probs=19.9
Q ss_pred cccCCCCCcccccchhhHHHHHhhh
Q 003865 555 YGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 555 wrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
|.|.. |+|.|....-+.+|+..-
T Consensus 2 ~~C~~--C~k~f~~~~~l~~H~~~h 24 (27)
T 1znf_A 2 YKCGL--CERSFVEKSALSRHQRVH 24 (27)
T ss_dssp CBCSS--SCCBCSSHHHHHHHGGGT
T ss_pred ccCCC--CCCcCCCHHHHHHHHHHc
Confidence 67885 999999999999998763
No 11
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=78.00 E-value=1.1 Score=38.02 Aligned_cols=27 Identities=22% Similarity=0.431 Sum_probs=20.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |+|.|+...-+.+|++..|.+
T Consensus 54 ~~~C~~--C~k~F~~~~~L~~H~~~h~~~ 80 (98)
T 2gqj_A 54 ALKCQH--CRKQFKSKAGLNYHTMAEHSA 80 (98)
T ss_dssp HHSCSS--SCCCCSCHHHHHHHHHHHSCS
T ss_pred CEECCC--CCCccCCHHHHHHHHHHHcCC
Confidence 577875 888888888888888777755
No 12
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=77.62 E-value=1.9 Score=34.34 Aligned_cols=27 Identities=22% Similarity=0.480 Sum_probs=24.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |+|.|....-+.+|++..|+.
T Consensus 45 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 71 (77)
T 2ct1_A 45 KFHCPH--CDTVIARKSDLGVHLRKQHSY 71 (77)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHTSCC
T ss_pred ccCCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 689986 999999999999999998864
No 13
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=76.97 E-value=2.3 Score=31.59 Aligned_cols=38 Identities=24% Similarity=0.331 Sum_probs=28.8
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhC
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|..+++..+.+ -.|.|.+ |+|.|....-+..|+...|
T Consensus 19 ~l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~hh 56 (57)
T 3uk3_C 19 YLNIHLRTHTGE---KPYKCEF--CEYAAAQKTSLRYHLERHH 56 (57)
T ss_dssp HHHHHHHHHHCC---CCEECSS--SSCEESSHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCC---CCcCCCC--CcchhCCHHHHHHHHHHhc
Confidence 344555554444 2589986 9999999999999998877
No 14
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=76.62 E-value=1.1 Score=29.83 Aligned_cols=27 Identities=26% Similarity=0.503 Sum_probs=23.2
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |+|.|....-+..|+..-+.|
T Consensus 7 ~~~C~~--C~k~f~~~~~L~~H~~~h~~~ 33 (35)
T 2elx_A 7 GYVCAL--CLKKFVSSIRLRSHIREVHGA 33 (35)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHTSCT
T ss_pred CeECCC--CcchhCCHHHHHHHHHHHcCC
Confidence 589986 999999999999999875544
No 15
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=75.74 E-value=1.5 Score=28.72 Aligned_cols=28 Identities=18% Similarity=0.370 Sum_probs=22.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|....|+|.|....-+..|+..-+.
T Consensus 2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~ 29 (31)
T 1sp2_A 2 PFMCTWSYCGKRFTRSDELQRHKRTHTG 29 (31)
T ss_dssp CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence 3678755699999999999999976433
No 16
>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}
Probab=75.72 E-value=1.1 Score=33.58 Aligned_cols=27 Identities=26% Similarity=0.477 Sum_probs=25.2
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
-|.|++ |-|-|..++-+.+|-.+||.+
T Consensus 5 GFiCP~--C~~~l~s~~~L~~Hye~~H~~ 31 (34)
T 3mjh_B 5 GFICPQ--CMKSLGSADELFKHYEAVHDA 31 (34)
T ss_dssp EEECTT--TCCEESSHHHHHHHHHHHTSS
T ss_pred ccCCcH--HHHHcCCHHHHHHHHHhcccc
Confidence 489997 999999999999999999986
No 17
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=75.61 E-value=1.7 Score=28.56 Aligned_cols=26 Identities=31% Similarity=0.588 Sum_probs=22.0
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|....|+|.|....-+..|+..-
T Consensus 3 ~~~C~~~~C~k~f~~~~~L~~H~~~H 28 (32)
T 1zfd_A 3 PYSCDHPGCDKAFVRNHDLIRHKKSH 28 (32)
T ss_dssp SBCCCCTTCCCCBSSSHHHHHHHGGG
T ss_pred CCcCcCCCCCCccCCHHHHHHHHHHc
Confidence 47898556999999999999998763
No 18
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=75.48 E-value=1.4 Score=27.82 Aligned_cols=26 Identities=23% Similarity=0.618 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~ 27 (29)
T 1ard_A 2 SFVCEV--CTRAFARQEHLKRHYRSHTN 27 (29)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHHSC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHhcC
Confidence 378986 99999999999999887443
No 19
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=74.77 E-value=2 Score=33.90 Aligned_cols=38 Identities=24% Similarity=0.324 Sum_probs=28.0
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhC
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|..+++....+ ..|.|.+ |.|.|....-+.+|++.-+
T Consensus 29 ~L~~H~~~h~~~---~~~~C~~--C~~~f~~~~~L~~H~~~H~ 66 (72)
T 1x6e_A 29 ILVQHQRVHTGE---KPYKCLE--CGKAFSQNSGLINHQRIHT 66 (72)
T ss_dssp HHHHHHHGGGCS---CCEECSS--SCCEESSHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCC---CCeECCC--CCcccCCHHHHHHHHHhcC
Confidence 344566554444 3689986 9999999999999997644
No 20
>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.71 E-value=1.3 Score=30.18 Aligned_cols=27 Identities=37% Similarity=0.891 Sum_probs=23.2
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |+|.|....-+..|+..-+.|
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~ 35 (37)
T 2elo_A 9 SYSCPV--CEKSFSEDRLIKSHIKTNHPE 35 (37)
T ss_dssp CCEETT--TTEECSSHHHHHHHHHHHCSS
T ss_pred CcCCCC--CCCccCCHHHHHHHHHHHcCC
Confidence 589986 999999999999999875544
No 21
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=73.68 E-value=2.3 Score=36.18 Aligned_cols=40 Identities=20% Similarity=0.387 Sum_probs=30.9
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++....+ -.|.|.+ |+|.|....-+.+|+.+.|..
T Consensus 81 ~l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~~H~~ 120 (124)
T 2dlq_A 81 ELRLHMVSHTGE---MPYKCSS--CSQQFMQKKDLQSHMIKLHSG 120 (124)
T ss_dssp HHHHHHHHHSSS---CSEECSS--SCCEESSHHHHHHHHHHTSSC
T ss_pred HHHHHHHHcCCC---CCccCCC--ccchhCCHHHHHHHHHHHCCC
Confidence 344565554444 2599986 999999999999999999975
No 22
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=73.67 E-value=1.4 Score=30.21 Aligned_cols=25 Identities=24% Similarity=0.525 Sum_probs=22.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+..|+|.|....-+..|+..
T Consensus 6 ~~~C~~~~C~k~f~~~~~L~~H~~~ 30 (38)
T 1bhi_A 6 PFLCTAPGCGQRFTNEDHLAVHKHK 30 (38)
T ss_dssp CEECCCTTTCCEESSHHHHHHHHHH
T ss_pred ceECCCCCCCcccCCHHHHHHHHHH
Confidence 5889866799999999999999875
No 23
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Probab=73.12 E-value=2.1 Score=29.05 Aligned_cols=25 Identities=20% Similarity=0.509 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|.....+..|+..-+
T Consensus 11 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 35 (37)
T 1p7a_A 11 PFQCPD--CDRSFSRSDHLALHRKRHM 35 (37)
T ss_dssp SBCCTT--TCCCBSSHHHHHHHHGGGT
T ss_pred CccCCC--CCcccCcHHHHHHHHHHhc
Confidence 589986 9999999999999987643
No 24
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=72.89 E-value=2.3 Score=33.61 Aligned_cols=40 Identities=20% Similarity=0.364 Sum_probs=28.1
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++....+ ..|.|.+ |+|.|....-+.+|++.-+.|
T Consensus 32 ~l~~H~~~H~~~---~~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 71 (74)
T 2lce_A 32 NLASHKTVHTGE---KPYRCNI--CGAQFNRPANLKTHTRIHSGE 71 (74)
T ss_dssp HHHHHHHHHCCC---CSEECTT--TCCEESCHHHHHHHHHHHCCS
T ss_pred HHHHHHHHcCCC---CCEECCC--CCchhCCHHHHHHHHHhcCCC
Confidence 344555554443 2588986 999999999999998765544
No 25
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=72.87 E-value=1.4 Score=30.49 Aligned_cols=25 Identities=24% Similarity=0.608 Sum_probs=22.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+..|+|.|.....+..|+..
T Consensus 8 ~~~C~~~~C~k~f~~~~~L~~H~~~ 32 (37)
T 1va1_A 8 QHICHIQGCGKVYGKTSHLRAHLRW 32 (37)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 5899866799999999999999875
No 26
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}
Probab=72.61 E-value=1.6 Score=32.35 Aligned_cols=27 Identities=22% Similarity=0.445 Sum_probs=23.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |+|.|....-+.+|+...|..
T Consensus 7 p~~C~~--C~k~F~~~~~L~~H~~~~H~~ 33 (48)
T 3iuf_A 7 PYACDI--CGKRYKNRPGLSYHYAHSHLA 33 (48)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHSSCC
T ss_pred CEECCC--cCcccCCHHHHHHHhhhhcCC
Confidence 589986 999999999999999856754
No 27
>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=72.25 E-value=1.5 Score=27.80 Aligned_cols=26 Identities=23% Similarity=0.529 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 3 ~~~C~~--C~~~f~~~~~l~~H~~~h~~ 28 (30)
T 2m0d_A 3 PYQCDY--CGRSFSDPTSKMRHLETHDT 28 (30)
T ss_dssp CEECTT--TCCEESCHHHHHHHHHTTCC
T ss_pred CccCCC--CCcccCCHHHHHHHHHHhcc
Confidence 478986 99999999999999976443
No 28
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=71.13 E-value=2.1 Score=28.81 Aligned_cols=26 Identities=23% Similarity=0.387 Sum_probs=22.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H~~ 34 (36)
T 2elr_A 9 THLCDM--CGKKFKSKGTLKSHKLLHTA 34 (36)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHHHHSS
T ss_pred CeecCc--CCCCcCchHHHHHHHHHhcC
Confidence 589986 99999999999999876443
No 29
>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=70.97 E-value=1.6 Score=27.34 Aligned_cols=26 Identities=27% Similarity=0.520 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~ 27 (29)
T 2m0e_A 2 EHKCPH--CDKKFNQVGNLKAHLKIHIA 27 (29)
T ss_dssp CCCCSS--CCCCCCTTTHHHHHHHHHHS
T ss_pred CCcCCC--CCcccCCHHHHHHHHHHhcc
Confidence 368985 99999999999999876443
No 30
>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=70.68 E-value=1.1 Score=30.97 Aligned_cols=27 Identities=22% Similarity=0.438 Sum_probs=22.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.. |+|.|....-+.+|+...|..
T Consensus 9 ~~~C~~--C~k~f~~~~~L~~H~~~~H~~ 35 (37)
T 2elm_A 9 LYYCSQ--CHYSSITKNCLKRHVIQKHSN 35 (37)
T ss_dssp EEECSS--SSCEEECHHHHHHHHHHHTCC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHHccC
Confidence 489985 999999999999996566653
No 31
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=70.63 E-value=1.7 Score=27.61 Aligned_cols=24 Identities=29% Similarity=0.705 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.. |+|.|.....+..|+..-
T Consensus 2 ~~~C~~--C~k~f~~~~~l~~H~~~H 25 (29)
T 1rik_A 2 KFACPE--CPKRFMRSDHLTLHILLH 25 (29)
T ss_dssp CEECSS--SSCEESCSHHHHHHHTGG
T ss_pred CccCCC--CCchhCCHHHHHHHHHHh
Confidence 367985 999999999999999763
No 32
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=70.53 E-value=3.1 Score=31.89 Aligned_cols=27 Identities=30% Similarity=0.514 Sum_probs=23.6
Q ss_pred cccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 553 WKYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 553 ~KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
..|.|.. |+|.|....-+..|++..|.
T Consensus 39 ~~~~C~~--C~k~f~~~~~L~~H~~~~H~ 65 (66)
T 2drp_A 39 KVYPCPF--CFKEFTRKDNMTAHVKIIHK 65 (66)
T ss_dssp CCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred cCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence 3689986 99999999999999998874
No 33
>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=70.42 E-value=2.5 Score=36.73 Aligned_cols=32 Identities=25% Similarity=0.329 Sum_probs=28.0
Q ss_pred cccccCCCCCccccc-------chhhHHHHHhhhChhHHHH
Q 003865 553 WKYGCGAKGCTKLFH-------AAEFVHKHLKLKHPELVIE 586 (790)
Q Consensus 553 ~KwrC~l~gCtKLFK-------gpEFVrKHI~nKH~E~Vee 586 (790)
.+..|.+ |.|.|. +..=+..||+.+|++.|+.
T Consensus 27 ~~A~Ck~--C~k~ls~g~~s~~GTS~L~rHL~~~H~~e~~~ 65 (76)
T 2djr_A 27 QYATCRL--CGRQVSRGPGVNVGTTALWKHLKSMHREELEK 65 (76)
T ss_dssp SCEEESS--SCCBCCCCSSCCSSSCHHHHHHHHTTHHHHHH
T ss_pred CEEECCC--CCCccCCCCCCCCchHHHHHHHHHHCHHHHHh
Confidence 4789986 999998 5788999999999998875
No 34
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=69.56 E-value=3.5 Score=32.92 Aligned_cols=27 Identities=19% Similarity=0.365 Sum_probs=23.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |+|.|....-+.+|++..|.+
T Consensus 47 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~ 73 (86)
T 1x6h_A 47 AFVCSK--CGKTFTRRNTMARHADNCAGP 73 (86)
T ss_dssp CEECSS--SCCEESCHHHHHHHHHHCCCC
T ss_pred ceECCC--CCChhCCHHHHHHHHHHccCC
Confidence 589986 999999999999999887765
No 35
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=69.27 E-value=3.4 Score=32.66 Aligned_cols=40 Identities=20% Similarity=0.441 Sum_probs=29.0
Q ss_pred hhhHHHH-hhhhcccCcccccCCCCCcccccchhhHHHHHhhhC
Q 003865 538 ALDPFVR-KIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 538 ~ve~fVk-k~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|..+++ ....+ ..|.|...+|+|.|....-+..|+..-+
T Consensus 24 ~L~~H~~~~H~~~---~~~~C~~~~C~k~f~~~~~L~~H~~~H~ 64 (79)
T 2dlk_A 24 YLNHHKKYQHIHQ---KSFSCPEPACGKSFNFKKHLKEHMKLHS 64 (79)
T ss_dssp HHHHHHHHGGGSC---CCEECSCTTTCCEESSHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCC---CCeECCCCCCcCccCCHHHHHHHHHHhC
Confidence 4455665 34443 3689987779999999999999987543
No 36
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=68.35 E-value=3 Score=34.10 Aligned_cols=40 Identities=20% Similarity=0.374 Sum_probs=28.9
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++....+ ..|.|.+ |+|.|....-+.+|++.-|.|
T Consensus 51 ~l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 90 (96)
T 2dmd_A 51 SLNKHLRIHSDE---RPFKCQI--CPYASRNSSQLTVHLRSHTGD 90 (96)
T ss_dssp HHHHHHHHSCCC---CCEECSS--SSCEESSHHHHHHHHTTCCSC
T ss_pred HHHHHHHHhCCC---CCccCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 344455554333 2589986 999999999999999887665
No 37
>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=67.97 E-value=2.3 Score=28.78 Aligned_cols=23 Identities=22% Similarity=0.533 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|.....+..|+..
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~ 31 (36)
T 2elv_A 9 LYDCHI--CERKFKNELDRDRHMLV 31 (36)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTT
T ss_pred CeECCC--CCCccCCHHHHHHHHHH
Confidence 589986 99999999999999876
No 38
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1
Probab=67.40 E-value=3.1 Score=28.11 Aligned_cols=24 Identities=33% Similarity=0.811 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.. |+|.|....-+..|+..-
T Consensus 2 p~~C~~--C~k~F~~~~~L~~H~~~H 25 (33)
T 1rim_A 2 KFACPE--CPKRFMRSDHLSKHITLH 25 (33)
T ss_dssp CCCCSS--SCCCCSSHHHHHHHHHHH
T ss_pred cccCCC--CCchhCCHHHHHHHHHHh
Confidence 368985 999999999999998763
No 39
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=70.67 E-value=1.1 Score=28.67 Aligned_cols=25 Identities=24% Similarity=0.421 Sum_probs=20.8
Q ss_pred cccCCCCCcccccchhhHHHHHhhhCh
Q 003865 555 YGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 555 wrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
|.|.. |+|.|.....+..|+..-+.
T Consensus 3 ~~C~~--C~k~f~~~~~l~~H~~~H~~ 27 (29)
T 2lvt_A 3 CQCVM--CGKAFTQASSLIAHVRQHTG 27 (29)
Confidence 67985 99999999999999876443
No 40
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=67.25 E-value=2.4 Score=28.40 Aligned_cols=25 Identities=24% Similarity=0.547 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|....-+..|+..-+
T Consensus 7 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 31 (35)
T 1srk_A 7 PFVCRI--CLSAFTTKANCARHLKVHT 31 (35)
T ss_dssp CEECSS--SCCEESSHHHHHHHHGGGT
T ss_pred CeeCCC--CCcccCCHHHHHHHHHHcC
Confidence 589986 9999999999999987643
No 41
>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6
Probab=67.03 E-value=3.8 Score=35.24 Aligned_cols=34 Identities=26% Similarity=0.389 Sum_probs=27.6
Q ss_pred cccccCCCCCccccc---chhhHHHHHhhhChhHHHHHH
Q 003865 553 WKYGCGAKGCTKLFH---AAEFVHKHLKLKHPELVIELT 588 (790)
Q Consensus 553 ~KwrC~l~gCtKLFK---gpEFVrKHI~nKH~E~Veev~ 588 (790)
.+..|.+ |.|.++ +..=+..||+.||++.+.++.
T Consensus 28 ~~a~Ck~--C~~~l~~~g~TSnL~rHL~~~H~~e~~~~~ 64 (73)
T 2ct5_A 28 KKIYCRI--CMAQIAYSGNTSNLSYHLEKNHPEEFCEFV 64 (73)
T ss_dssp SCCEETT--TTEECCCCSSTHHHHHHHHHSCHHHHHHHC
T ss_pred CEEECCC--CCccccCCCChHhHHHHHHHHCHHHHHHHH
Confidence 4778986 999976 466689999999999888753
No 42
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.70 E-value=2.2 Score=28.88 Aligned_cols=25 Identities=24% Similarity=0.644 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|....-+..|+..-+
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2els_A 9 IFTCEY--CNKVFKFKHSLQAHLRIHT 33 (36)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHHC
T ss_pred CEECCC--CCceeCCHHHHHHHHHHhC
Confidence 589986 9999999999999987643
No 43
>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}
Probab=66.40 E-value=2 Score=27.02 Aligned_cols=24 Identities=25% Similarity=0.646 Sum_probs=20.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.. |+|.|....-+..|+..-
T Consensus 2 ~~~C~~--C~k~f~~~~~l~~H~~~H 25 (29)
T 2m0f_A 2 PLKCRE--CGKQFTTSGNLKRHLRIH 25 (29)
T ss_dssp CEECTT--TSCEESCHHHHHHHHHHH
T ss_pred CccCCC--CCCccCChhHHHHHHHHh
Confidence 367986 999999999999998763
No 44
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=66.06 E-value=5.1 Score=32.20 Aligned_cols=39 Identities=21% Similarity=0.458 Sum_probs=27.5
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
|..+++....+ ..|.|.+ |+|.|....-+.+|++.-+.|
T Consensus 50 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~H~~~ 88 (90)
T 1a1h_A 50 LTTHIRTHTGE---KPFACDI--CGRKFARSDERKRHTKIHLRQ 88 (90)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESSHHHHHHHHGGGGC-
T ss_pred HHHHHHHcCCC---CCccCCC--CCchhCCHHHHHHHHHHhccc
Confidence 44455544433 3589986 999999999999999875544
No 45
>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=65.90 E-value=2.5 Score=26.96 Aligned_cols=23 Identities=17% Similarity=0.379 Sum_probs=20.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.. |+|.|.....+..|+..
T Consensus 3 ~~~C~~--C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvg_A 3 PYRCPL--CRAGCPSLASMQAHMRG 25 (27)
T ss_dssp TEEETT--TTEEESCHHHHHHHHTT
T ss_pred CcCCCC--CCcccCCHHHHHHHHHh
Confidence 478985 99999999999999864
No 46
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}
Probab=69.25 E-value=1.3 Score=28.32 Aligned_cols=27 Identities=22% Similarity=0.582 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.. |+|.|....-+..|+..-+.+
T Consensus 3 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~ 29 (30)
T 2lvr_A 3 PYVCIH--CQRQFADPGALQRHVRIHTGE 29 (30)
Confidence 478985 999999999999998764443
No 47
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=65.38 E-value=3.1 Score=26.22 Aligned_cols=23 Identities=22% Similarity=0.515 Sum_probs=20.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.. |+|.|....-+.+|+..
T Consensus 3 ~~~C~~--C~k~f~~~~~l~~H~~~ 25 (27)
T 2kvh_A 3 PFSCSL--CPQRSRDFSAMTKHLRT 25 (27)
T ss_dssp CEECSS--SSCEESSHHHHHHHHHH
T ss_pred CccCCC--cChhhCCHHHHHHHHHH
Confidence 478985 99999999999999864
No 48
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=65.24 E-value=4.2 Score=34.90 Aligned_cols=39 Identities=15% Similarity=0.313 Sum_probs=29.4
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++.. .| -.|.|.+ |+|.|+...-+.+||...|.+
T Consensus 50 ~L~~H~~~h-~~---k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~ 88 (96)
T 2ctd_A 50 GLKKHMENC-KQ---EMFTCHH--CGKQLRSLAGMKYHVMANHNS 88 (96)
T ss_dssp HHHHHHHHH-CC---CCCCCSS--SCCCCSSHHHHHHHHHHHTCC
T ss_pred HHHHHHHHH-CC---CCeECCC--CCCeeCCHHHHHHHhHHhcCC
Confidence 344566654 33 3689986 999999999999997777864
No 49
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=65.20 E-value=3.4 Score=29.44 Aligned_cols=26 Identities=27% Similarity=0.588 Sum_probs=22.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ep1_A 12 PYECSD--CGKSFIKKSQLHVHQRIHTG 37 (46)
T ss_dssp SSCCSS--SCCCCSSHHHHHHHHGGGSS
T ss_pred CcCCCC--CCchhCCHHHHHHHHHHhCC
Confidence 589986 99999999999999987443
No 50
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.76 E-value=3.1 Score=29.93 Aligned_cols=26 Identities=23% Similarity=0.446 Sum_probs=22.2
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.. |.|.|....-+..|++.-+.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~~ 37 (46)
T 2eom_A 12 GHRCSD--CGKFFLQASNFIQHRRIHTG 37 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHHHSS
T ss_pred CcCCCC--CCCeeCChHHHHHHHHHhCC
Confidence 589986 99999999999999876433
No 51
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=64.72 E-value=3 Score=33.21 Aligned_cols=39 Identities=23% Similarity=0.382 Sum_probs=27.8
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
|..+++....+ -.|.|.+ |+|.|.....+..|+..-+.|
T Consensus 34 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 72 (77)
T 2cot_A 34 LSKHRRTHTGE---KPYKCDE--CGKAFIQRSHLIGHHRVHTGS 72 (77)
T ss_dssp HHHHHTTTCCS---CSEECSS--SCCEESSHHHHHHHGGGSCCC
T ss_pred HHHHHHHcCCC---cCeeCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 34455544333 2589986 999999999999999765544
No 52
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.57 E-value=2.6 Score=28.31 Aligned_cols=24 Identities=21% Similarity=0.419 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.. |+|.|....-+..|+..-
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H 32 (36)
T 2elt_A 9 PYKCPQ--CSYASAIKANLNVHLRKH 32 (36)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHH
T ss_pred CCCCCC--CCcccCCHHHHHHHHHHc
Confidence 589986 999999999999998753
No 53
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=64.54 E-value=3.1 Score=29.26 Aligned_cols=24 Identities=25% Similarity=0.639 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (44)
T 2en7_A 12 PYVCNE--CGKAFRSKSYLIIHTRTH 35 (44)
T ss_dssp SSCCTT--TCCCCSSHHHHHHHHTTT
T ss_pred CeECCC--CCCccCCHHHHHHHhhhc
Confidence 589986 999999999999999753
No 54
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=64.38 E-value=5.3 Score=34.15 Aligned_cols=43 Identities=23% Similarity=0.380 Sum_probs=30.3
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChhH
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 583 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E~ 583 (790)
.|..+++....+ ..|.|.+..|+|.|....-+.+|+..-+.++
T Consensus 79 ~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k 121 (124)
T 1ubd_C 79 NLRTHVRIHTGD---RPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121 (124)
T ss_dssp HHHHHHHHHHCC---CCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred HHHHHHHHhCCC---CceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence 344555554444 3699976679999999999999999866654
No 55
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.25 E-value=2.9 Score=28.20 Aligned_cols=25 Identities=12% Similarity=0.377 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 9 ~~~C~~--C~k~f~~~~~l~~H~~~H~ 33 (36)
T 2elq_A 9 PFKCSL--CEYATRSKSNLKAHMNRHS 33 (36)
T ss_dssp SEECSS--SSCEESCHHHHHHHHHHSS
T ss_pred CccCCC--CCchhCCHHHHHHHHHHhc
Confidence 589986 9999999999999987633
No 56
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=63.96 E-value=2.5 Score=30.96 Aligned_cols=26 Identities=27% Similarity=0.579 Sum_probs=22.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+..|+|.|....-+..|+..-
T Consensus 18 ~~~C~~~~C~k~F~~~~~L~~H~~~H 43 (47)
T 1ncs_A 18 TFECLFPGCTKTFKRRYNIRSHIQTH 43 (47)
T ss_dssp EEECCCTTCCCEECSSSSHHHHHHHH
T ss_pred CeECCCCCCCCccCCHHHHHHHHHHc
Confidence 58997557999999999999998763
No 57
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=63.65 E-value=3.6 Score=25.88 Aligned_cols=25 Identities=24% Similarity=0.576 Sum_probs=20.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|....|+|.|....-+.+|+..
T Consensus 2 ~~~C~~~~C~k~f~~~~~l~~H~~~ 26 (29)
T 2ab3_A 2 VYVCHFENCGRSFNDRRKLNRHKKI 26 (29)
T ss_dssp CEEECSTTTCEEESSHHHHHHHHGG
T ss_pred CCCCcCCcCcCccCCHHHHHHHHHH
Confidence 3678744599999999999999865
No 58
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.63 E-value=4.4 Score=34.16 Aligned_cols=42 Identities=19% Similarity=0.267 Sum_probs=30.4
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChhHHH
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVI 585 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E~Ve 585 (790)
|..+++....+ ..|.|.+ |+|.|....-+.+|++.-|.....
T Consensus 53 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~ 94 (110)
T 2csh_A 53 LVGHMKIHTGI---KPYECNI--CAKRFMWRDSFHRHVTSCTKSYEA 94 (110)
T ss_dssp HHHHHTTTCCC---CCEECSS--SCCEESCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCC---CCeeCCC--CcchhcCHHHHHHHHHHccccccc
Confidence 33454443333 3689986 999999999999999987776443
No 59
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.48 E-value=3 Score=29.86 Aligned_cols=26 Identities=23% Similarity=0.562 Sum_probs=22.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~~ 37 (46)
T 2emi_A 12 HYECSE--CGKAFIQKSTLSMHQRIHRG 37 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHGGGCS
T ss_pred CCCCCC--CCcccCCHHHHHHHHhHhCC
Confidence 589986 99999999999999886443
No 60
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=63.10 E-value=4.4 Score=28.87 Aligned_cols=26 Identities=27% Similarity=0.533 Sum_probs=22.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |+|.|....-+..|+...|.
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~~H~ 37 (47)
T 2epx_A 12 PYECIE--CGKAFIQNTSLIRHWRYYHT 37 (47)
T ss_dssp SBCCSS--SCCCBSSHHHHHHHHTTTTT
T ss_pred CEECCc--cCchhCChHHHHHHhHhhcC
Confidence 589986 99999999999999985564
No 61
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=63.04 E-value=3.6 Score=32.51 Aligned_cols=29 Identities=24% Similarity=0.655 Sum_probs=25.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|....|+|.|....-+..|+...|..
T Consensus 7 ~~~C~~~~C~~~f~~~~~L~~H~~~~H~~ 35 (79)
T 2dlk_A 7 GMPCDFPGCGRIFSNRQYLNHHKKYQHIH 35 (79)
T ss_dssp SEECSSTTTCCEESSHHHHHHHHHHGGGS
T ss_pred CccCCCCCCcCccCCHHHHHHHHHHHhCC
Confidence 68899888999999999999999977753
No 62
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.65 E-value=3.6 Score=29.39 Aligned_cols=25 Identities=24% Similarity=0.634 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq2_A 12 PYQCNE--CGKAFSQTSKLARHQRVHT 36 (46)
T ss_dssp SSSCCS--SCCCCSSHHHHHHHGGGGC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 589986 9999999999999987633
No 63
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.47 E-value=3.6 Score=29.44 Aligned_cols=25 Identities=24% Similarity=0.505 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2emg_A 12 PFICSE--CGKVFTHKTNLIIHQKIHT 36 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHTTTS
T ss_pred CEECCc--cCcccCCHHHHHHHHHHhC
Confidence 589986 9999999999999987633
No 64
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=62.42 E-value=3.5 Score=29.47 Aligned_cols=25 Identities=28% Similarity=0.589 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq1_A 12 PYKCNE--CGKAFRAHSNLTTHQVIHT 36 (46)
T ss_dssp CCCCTT--TTCCCSSHHHHHHHHTTTC
T ss_pred CeECCc--CChhhCCHHHHHHHHHHhC
Confidence 689986 9999999999999987633
No 65
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=62.30 E-value=4.7 Score=32.89 Aligned_cols=27 Identities=22% Similarity=0.298 Sum_probs=23.3
Q ss_pred cccCCCCCcccccchhhHHHHHhhhCh
Q 003865 555 YGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 555 wrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
+.|.-..|+|.|..++.+.+||.+.|-
T Consensus 2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv 28 (64)
T 1zw8_A 2 LKCKWKECPESASSLFDLQRHLLKDHV 28 (64)
T ss_dssp CCCCCTTCCCCCSSHHHHHHHHHHHSC
T ss_pred CeEeeCCCCCcCCCHHHHHHHHHhhcc
Confidence 467777899999999999999987774
No 66
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.15 E-value=3.8 Score=30.20 Aligned_cols=25 Identities=24% Similarity=0.392 Sum_probs=22.0
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
-|.|...+|+|.|....-+.+|++.
T Consensus 9 p~~C~~~~C~k~F~~~~~L~~H~r~ 33 (38)
T 2eln_A 9 LLKCPTDGCDYSTPDKYKLQAHLKV 33 (38)
T ss_dssp CEECSSSSCCCEESCHHHHHHHHHH
T ss_pred CCCCCCCCCCCccCCHHHHHHHHHh
Confidence 4899866799999999999999875
No 67
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=62.07 E-value=2.8 Score=29.22 Aligned_cols=25 Identities=24% Similarity=0.522 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|.....+..|+..-+
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 34 (41)
T 2ept_A 10 VYECQE--CGKSFRQKGSLTLHERIHT 34 (41)
T ss_dssp CEECSS--SCCEESSHHHHHHHGGGCC
T ss_pred CeECCC--CCCCcCCHHHHHHHHHHhC
Confidence 589986 9999999999999987633
No 68
>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=61.84 E-value=4.5 Score=28.76 Aligned_cols=27 Identities=19% Similarity=0.460 Sum_probs=22.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.. |+|.|.....+..|+..-+.+
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 36 (43)
T 2yrm_A 10 AFFCNE--CDCRFSEEASLKRHTLQTHSD 36 (43)
T ss_dssp CBCCSS--SCCCBSSHHHHHHHHHHHTCT
T ss_pred CEECCC--CCCeeCChHHHHHHHHhhCCC
Confidence 589986 999999999999998764433
No 69
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=61.75 E-value=8.8 Score=31.21 Aligned_cols=41 Identities=20% Similarity=0.403 Sum_probs=31.6
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChhH
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 583 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E~ 583 (790)
.|..+++....+ ..|.|.. |+|.|....-+..|+...|...
T Consensus 18 ~L~~H~~~H~~~---~~~~C~~--C~k~f~~~~~L~~H~~~h~~~~ 58 (88)
T 1llm_C 18 HLTTHIRTHTGE---KPFACDI--CGRKFARSDERKRHRDIQHILP 58 (88)
T ss_dssp HHHHHHHHHHCC---CCEECTT--TCCEESSHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHcCCC---CCccCCC--CCCccCCHHHHHHHHHHhCCCc
Confidence 344566654444 3699986 9999999999999999999643
No 70
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.62 E-value=2.7 Score=30.09 Aligned_cols=25 Identities=24% Similarity=0.542 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+.+|++.-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (45)
T 2epu_A 12 PFECTH--CGKSFRAKGNLVTHQRIHT 36 (45)
T ss_dssp SEEETT--TTEEESSHHHHHHHHTTTS
T ss_pred CccCCC--CCCccCChHHHHHHHHHhC
Confidence 589986 9999999999999987633
No 71
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.51 E-value=3.9 Score=29.30 Aligned_cols=24 Identities=21% Similarity=0.592 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|.....+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2en9_A 12 LFKCNE--CKKTFTQSSSLTVHQRIH 35 (46)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHH
T ss_pred CEECCc--cCcccCCHHHHHHHHHHc
Confidence 589986 999999999999998763
No 72
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.42 E-value=2.8 Score=30.15 Aligned_cols=26 Identities=27% Similarity=0.717 Sum_probs=22.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eoz_A 12 PYSCNV--CGKAFVLSAHLNQHLRVHTQ 37 (46)
T ss_dssp SEEETT--TTEEESSHHHHHHHHHHHSS
T ss_pred CeECcc--cChhhCCHHHHHHHHHHhCC
Confidence 689986 99999999999999876443
No 73
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.20 E-value=3.8 Score=29.39 Aligned_cols=24 Identities=25% Similarity=0.645 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|.....+.+|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eoh_A 12 PYECKE--CRKTFIQIGHLNQHKRVH 35 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHHC
T ss_pred CcCCCC--cCchhCCHHHHHHHHHHh
Confidence 589986 999999999999998763
No 74
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=61.09 E-value=3.7 Score=29.42 Aligned_cols=24 Identities=25% Similarity=0.643 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2enh_A 12 PYECDV--CRKAFSHHASLTQHQRVH 35 (46)
T ss_dssp SCBCTT--TCCBCSSSHHHHHHGGGS
T ss_pred CcCCCC--cCchhCCHHHHHHHHHHh
Confidence 589986 999999999999998763
No 75
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=61.05 E-value=6.4 Score=30.70 Aligned_cols=36 Identities=25% Similarity=0.542 Sum_probs=23.8
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHh
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLK 577 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~ 577 (790)
|..+++..+.+ ..|.|.+..|+|.|....-+.+|++
T Consensus 35 L~~H~~~H~~~---~~~~C~~~~C~k~f~~~~~l~~H~~ 70 (72)
T 2epa_A 35 LKAHTRTHTGE---KPFSCSWKGCERRFARSDELSRHRR 70 (72)
T ss_dssp HHHHHHHHSSS---CSEECCCTTCCCEESSHHHHHHHTT
T ss_pred HHHHHHhcCCC---CCccCCCCCCCcccCCHHHHHhHhh
Confidence 33455444433 2578875668888888888888875
No 76
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}
Probab=60.99 E-value=3.5 Score=32.29 Aligned_cols=30 Identities=20% Similarity=0.417 Sum_probs=25.2
Q ss_pred cccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 553 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 553 ~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
-.|.|...+|.|.|+....+..|+..-+.+
T Consensus 16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~ 45 (72)
T 2epa_A 16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGE 45 (72)
T ss_dssp CCEECSSTTTCCEESSHHHHHHHHHHHSSS
T ss_pred CceeCCCCCCccccCCHHHHHHHHHhcCCC
Confidence 378999888999999999999999764443
No 77
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=60.95 E-value=4.5 Score=35.88 Aligned_cols=41 Identities=29% Similarity=0.440 Sum_probs=29.3
Q ss_pred hhhHHH-HhhhhcccCcccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 538 ALDPFV-RKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 538 ~ve~fV-kk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|..++ +..+.+ ..|.|.+.+|+|.|....-+.+|+++.|+
T Consensus 114 ~L~~H~~~~H~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~hhg 155 (155)
T 2gli_A 114 DRAKHQNRTHSNE---KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155 (155)
T ss_dssp TTHHHHHHTTCSC---CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred HHHHHHHHhcCCC---CCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence 344565 333333 35899877799999999999999988773
No 78
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.92 E-value=4.3 Score=29.00 Aligned_cols=25 Identities=24% Similarity=0.640 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2enf_A 12 PYKCNE--CGKVFTQNSHLVRHRGIHT 36 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHTTTT
T ss_pred CeECCC--CCcccCCHHHHHHHHHhhC
Confidence 589986 9999999999999987633
No 79
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=60.89 E-value=3.4 Score=32.85 Aligned_cols=27 Identities=30% Similarity=0.557 Sum_probs=24.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |+|.|....-+..|+...|.+
T Consensus 15 ~~~C~~--C~k~f~~~~~L~~H~~~~h~~ 41 (77)
T 2ct1_A 15 PYECYI--CHARFTQSGTMKMHILQKHTE 41 (77)
T ss_dssp SEECTT--TCCEESCHHHHHHHHHHHSSS
T ss_pred CeECCC--cCchhCCHHHHHHHHHHhcCC
Confidence 589996 999999999999999988875
No 80
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.72 E-value=4.5 Score=28.98 Aligned_cols=25 Identities=24% Similarity=0.654 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yth_A 12 PFQCEE--CGKRFTQNSHLHSHQRVHT 36 (46)
T ss_dssp SBCCSS--SCCCBSSHHHHHHHGGGGT
T ss_pred CCCCCC--CCcccCCHHHHHHHHHhcC
Confidence 589986 9999999999999987633
No 81
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.71 E-value=4.3 Score=28.92 Aligned_cols=24 Identities=21% Similarity=0.398 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eop_A 12 PHECRE--CGKSFSFNSQLIVHQRIH 35 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHTTT
T ss_pred CeeCCC--CCchhCCHHHHHHHHHHc
Confidence 689986 999999999999998773
No 82
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=60.54 E-value=4.1 Score=25.69 Aligned_cols=23 Identities=26% Similarity=0.676 Sum_probs=20.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.. |+|.|....-+..|+..
T Consensus 3 ~~~C~~--C~k~f~~~~~l~~H~~~ 25 (28)
T 2kvf_A 3 PYSCSV--CGKRFSLKHQMETHYRV 25 (28)
T ss_dssp SEECSS--SCCEESCHHHHHHHHTT
T ss_pred CccCCC--CCcccCCHHHHHHHHHh
Confidence 478986 99999999999999875
No 83
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.53 E-value=4.2 Score=28.94 Aligned_cols=24 Identities=25% Similarity=0.677 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytr_A 12 PYKCNE--CGKAFSQTSKLARHQRIH 35 (46)
T ss_dssp TTCCTT--TCCCCSSHHHHHHHHTTT
T ss_pred CcCCCC--CCCccCCHHHHHHHHHhc
Confidence 589986 999999999999998763
No 84
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A
Probab=60.20 E-value=4.3 Score=29.07 Aligned_cols=25 Identities=24% Similarity=0.620 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+.+|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emk_A 12 PYECKE--CGKAFSQTTHLIQHQRVHT 36 (46)
T ss_dssp SCBCSS--SCCBCSCHHHHHHHHHHHS
T ss_pred ceECCC--CCchhCCHHHHHHHHHHcC
Confidence 589986 9999999999999997633
No 85
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.14 E-value=4.4 Score=28.95 Aligned_cols=25 Identities=20% Similarity=0.475 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2epz_A 12 PFDCID--CGKAFSDHIGLNQHRRIHT 36 (46)
T ss_dssp SBCCTT--TCCCBSSHHHHHHHHTTTT
T ss_pred CeECCC--CCceeCCHHHHHHHHHHhC
Confidence 689986 9999999999999997633
No 86
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.13 E-value=3.3 Score=29.73 Aligned_cols=25 Identities=24% Similarity=0.580 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytp_A 12 HYECSE--CGKAFARKSTLIMHQRIHT 36 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTTTS
T ss_pred CeECCc--CCcccCCHHHHHHHHHHhC
Confidence 589986 9999999999999987633
No 87
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=60.07 E-value=3.7 Score=29.47 Aligned_cols=23 Identities=26% Similarity=0.537 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+..|++.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytt_A 12 PYQCSE--CGKSFSGSYRLTQHWIT 34 (46)
T ss_dssp TTCCSS--SCCCCSSHHHHHHHHTH
T ss_pred CeeCCC--CCcccCCHHHHHHHHHH
Confidence 589986 99999999999999876
No 88
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Probab=60.04 E-value=3.8 Score=28.64 Aligned_cols=26 Identities=23% Similarity=0.535 Sum_probs=22.2
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 35 (42)
T 2el5_A 10 PYECSE--CGKAFNRKDQLISHQRTHAG 35 (42)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGCC
T ss_pred CccCCC--cChhhCCHHHHHHHHHhcCC
Confidence 589986 99999999999999976443
No 89
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.84 E-value=4.2 Score=28.95 Aligned_cols=25 Identities=36% Similarity=0.650 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eq4_A 12 LYNCKE--CGKSFSRAPCLLKHERLHS 36 (46)
T ss_dssp CCCBTT--TTBCCSCHHHHHHHHHHCC
T ss_pred CeECCC--CCCccCchHHHHHHHHhcC
Confidence 589986 9999999999999987633
No 90
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.62 E-value=4.5 Score=28.11 Aligned_cols=23 Identities=26% Similarity=0.677 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+..|+..
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~ 32 (42)
T 2yte_A 10 PYSCAE--CKETFSDNNRLVQHQKM 32 (42)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHHHH
T ss_pred CeECCC--CCCccCCHHHHHHHHHH
Confidence 589986 99999999999999876
No 91
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=59.61 E-value=9.1 Score=31.31 Aligned_cols=35 Identities=26% Similarity=0.543 Sum_probs=25.4
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhh
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
|..+++....+ ..|.|.+ |+|.|....-+.+|++.
T Consensus 63 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~ 97 (100)
T 2ebt_A 63 LTRHYRKHTGA---KPFQCGV--CNRSFSRSDHLALHMKR 97 (100)
T ss_dssp HHHHHHHHTSC---CSCBCSS--SCCBCSSHHHHHHHHHH
T ss_pred HHHHHHHhCCC---CCeECCC--CcCccCCHHHHHHHHHH
Confidence 33455544444 2589986 99999999999999875
No 92
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.50 E-value=3.6 Score=29.39 Aligned_cols=25 Identities=28% Similarity=0.614 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep3_A 12 PYRCAE--CGKAFTDRSNLFTHQKIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTTTT
T ss_pred CeECCC--CCchhCCHHHHHHHHHHcC
Confidence 589986 9999999999999997633
No 93
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.44 E-value=4.5 Score=28.99 Aligned_cols=24 Identities=25% Similarity=0.650 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2em6_A 12 CYKCDV--CGKEFSQSSHLQTHQRVH 35 (46)
T ss_dssp CCBCSS--SCCBCSSHHHHHHHHTTT
T ss_pred CeECCC--CCcccCCHHHHHHHHHHc
Confidence 589986 999999999999998753
No 94
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.35 E-value=4.6 Score=28.75 Aligned_cols=25 Identities=28% Similarity=0.475 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+.+|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eov_A 12 PYKCSD--CGKSFTWKSRLRIHQKCHT 36 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHHHHS
T ss_pred CccCCc--cChhhCCHHHHHHHHHhcC
Confidence 589986 9999999999999987543
No 95
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.35 E-value=3.5 Score=29.37 Aligned_cols=26 Identities=19% Similarity=0.475 Sum_probs=22.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2ytf_A 12 PFECSE--CQKAFNTKSNLIVHQRTHTG 37 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHTSCS
T ss_pred CcCCCC--CCcccCCHHHHHHHHHHhCC
Confidence 589986 99999999999999876433
No 96
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.32 E-value=4 Score=29.07 Aligned_cols=25 Identities=24% Similarity=0.481 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2epv_A 12 PYECNE--CGKAFIWKSLLIVHERTHA 36 (44)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGS
T ss_pred CeECCC--CCcccCchHHHHHHHhHhc
Confidence 589986 9999999999999987643
No 97
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=59.29 E-value=4 Score=28.60 Aligned_cols=26 Identities=23% Similarity=0.585 Sum_probs=22.2
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 11 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 36 (42)
T 2eos_A 11 PYPCEI--CGTRFRHLQTLKSHLRIHTG 36 (42)
T ss_dssp CBCCSS--SCCCBSSHHHHHHHTTTTSC
T ss_pred CEECCC--CCCccCCHHHHHHHHHhcCC
Confidence 589986 99999999999999876443
No 98
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=59.07 E-value=3.6 Score=29.34 Aligned_cols=25 Identities=28% Similarity=0.699 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yrj_A 12 PYRCGE--CGKAFAQKANLTQHQRIHT 36 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTTTS
T ss_pred CeECCC--CCCccCCHHHHHHHHHHcC
Confidence 589986 9999999999999987633
No 99
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.51 E-value=5 Score=28.47 Aligned_cols=24 Identities=25% Similarity=0.609 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (44)
T 2eou_A 12 TSECQE--CGKIFRHSSLLIEHQALH 35 (44)
T ss_dssp CCCCTT--TCCCCSSHHHHHHHHHHH
T ss_pred CeECCC--CCcccCCHHHHHHHHHHH
Confidence 589986 999999999999998763
No 100
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.49 E-value=4.7 Score=28.90 Aligned_cols=24 Identities=29% Similarity=0.822 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytq_A 12 PYGCSE--CGKAFSSKSYLIIHMRTH 35 (46)
T ss_dssp SCBCSS--SCCBCSCHHHHHHHHTTT
T ss_pred CcCCCc--cChhhCChHHHHHHHHHh
Confidence 589986 999999999999998863
No 101
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=58.48 E-value=3.9 Score=29.34 Aligned_cols=25 Identities=24% Similarity=0.434 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em4_A 12 PYECIE--CGKAFKTKSSLICHRRSHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred CcCCCC--CCCccCCHHHHHHHHHhcC
Confidence 589986 9999999999999987643
No 102
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A
Probab=58.42 E-value=3.8 Score=28.32 Aligned_cols=26 Identities=23% Similarity=0.634 Sum_probs=22.0
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 6 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 31 (39)
T 1njq_A 6 SYTCSF--CKREFRSAQALGGHMNVHRR 31 (39)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHTTCC
T ss_pred ceECCC--CCcccCCHHHHHHHHHHcCC
Confidence 589986 99999999999999876443
No 103
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.31 E-value=3.5 Score=29.40 Aligned_cols=24 Identities=25% Similarity=0.600 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+.+|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eq3_A 12 PYECNQ--CGKAFSVRSSLTTHQAIH 35 (46)
T ss_dssp SSEETT--TTEECSSHHHHHHHHTTS
T ss_pred CeECCC--CChhhCCHHHHHHHHHHh
Confidence 589986 999999999999998763
No 104
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.20 E-value=4.7 Score=28.78 Aligned_cols=24 Identities=25% Similarity=0.688 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2yti_A 12 PYKCNE--CGKVFTQNSHLARHRGIH 35 (46)
T ss_dssp TTCCSS--SCCCCSSHHHHHHHHTTT
T ss_pred CeECCC--CCcccCChhHHHHHhHhc
Confidence 589986 999999999999998753
No 105
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.16 E-value=3.8 Score=29.30 Aligned_cols=25 Identities=28% Similarity=0.627 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2em3_A 12 PYECKV--CSKAFTQKAHLAQHQKTHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHhC
Confidence 689986 9999999999999997643
No 106
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Probab=58.01 E-value=3.8 Score=28.49 Aligned_cols=24 Identities=29% Similarity=0.501 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.. |+|.|....-+..|+..-
T Consensus 11 ~~~C~~--C~k~f~~~~~l~~H~~~H 34 (42)
T 2epc_A 11 PYLCGQ--CGKSFTQRGSLAVHQRSC 34 (42)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHT
T ss_pred CeECCC--CCcccCCHHHHHHHhhhc
Confidence 589986 999999999999998763
No 107
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=58.01 E-value=4.2 Score=29.26 Aligned_cols=23 Identities=26% Similarity=0.657 Sum_probs=21.0
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eon_A 12 PYKCQV--CGKAFRVSSHLVQHHSV 34 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHTTT
T ss_pred ccCCCC--CCcccCcHHHHHHHHHh
Confidence 589986 99999999999999876
No 108
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.69 E-value=4.4 Score=28.95 Aligned_cols=26 Identities=23% Similarity=0.561 Sum_probs=22.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |+|.|....-+.+|+..-+.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~~ 37 (46)
T 2eml_A 12 PYECSV--CGKAFSHRQSLSVHQRIHSG 37 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGSS
T ss_pred CeeCCC--cCCccCCHHHHHHHHHHhcC
Confidence 589986 99999999999999976433
No 109
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=57.67 E-value=9.5 Score=29.90 Aligned_cols=36 Identities=17% Similarity=0.222 Sum_probs=22.8
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhh
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
|..+++....+ ..|.|.+ |+|.|....-+.+|++.-
T Consensus 45 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~H 80 (82)
T 2kmk_A 45 MKKHTFIHTGE---KPHKCQV--CGKAFSQSSNLITHSRKH 80 (82)
T ss_dssp HHHHHHHHHTC---CCEECTT--TSCEESSHHHHHHHHHHH
T ss_pred HHHHHHHhcCC---CCCcCCC--cchhhCChHHHHHHHHhh
Confidence 33444443333 2577875 888888888888887653
No 110
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=57.59 E-value=6.3 Score=33.22 Aligned_cols=36 Identities=17% Similarity=0.317 Sum_probs=27.1
Q ss_pred HHHHhhhhcccCcccccCCCCCccccc-chhhHHHHHhhhCh
Q 003865 541 PFVRKIRDEKYGWKYGCGAKGCTKLFH-AAEFVHKHLKLKHP 581 (790)
Q Consensus 541 ~fVkk~~DEk~g~KwrC~l~gCtKLFK-gpEFVrKHI~nKH~ 581 (790)
.+.+..+.+ -.|.|.+ |+|.|. ...-+..|++.-|.
T Consensus 14 ~h~~~h~~~---~~~~C~~--C~k~f~~~~~~L~~H~~~h~~ 50 (98)
T 2gqj_A 14 QWQRAIHER---GEAVCPT--CNVVTRKTLVGLKKHMEVCQK 50 (98)
T ss_dssp HHHHTTTTT---SCCCCTT--TCCCCSSCSHHHHHHHHHHHH
T ss_pred HHHHHhccC---CCcCCCC--CCCChhhhHHHHHHHHHHHcC
Confidence 344444444 3799986 999999 99999999977554
No 111
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}
Probab=57.56 E-value=5.3 Score=28.49 Aligned_cols=24 Identities=21% Similarity=0.508 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+.+|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2em0_A 12 TWKCRE--CDMCFSQASSLRLHQNVH 35 (46)
T ss_dssp CCCCSS--SCCCCSSHHHHHHHGGGG
T ss_pred CeECCC--CCcccCCHHHHHHHHHHc
Confidence 589986 999999999999998763
No 112
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=57.40 E-value=8.7 Score=29.94 Aligned_cols=35 Identities=17% Similarity=0.478 Sum_probs=22.5
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhh
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
|..+++....+ ..|.|.+ |+|.|....-+..|++.
T Consensus 37 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~ 71 (73)
T 1f2i_G 37 LTRHIRIHTGQ---KPFQCRI--CMRNFSRSDHLTTHIRT 71 (73)
T ss_dssp HHHHHHHHHCC---CCEECTT--TCCEESCHHHHHHHHTT
T ss_pred HHHHHHhhCCC---CCeECCC--CCchhCCHHHHHHHHHh
Confidence 33454443333 2578875 88888888888888754
No 113
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}
Probab=57.37 E-value=6.8 Score=30.75 Aligned_cols=40 Identities=28% Similarity=0.405 Sum_probs=29.1
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++....+ ..|.|.+ |+|.|....-+..|+...+.+
T Consensus 16 ~l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 55 (82)
T 2kmk_A 16 TLSTHLLIHSDT---RPYPCQY--CGKRFHQKSDMKKHTFIHTGE 55 (82)
T ss_dssp HHHHHHHHHHTC---CCEECSS--SCCEESSHHHHHHHHHHHHTC
T ss_pred hHHHHHHHcCCC---CCeeCCc--CChhhCCHHHHHHHHHHhcCC
Confidence 344555554433 3689986 999999999999999865543
No 114
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.33 E-value=5.1 Score=28.62 Aligned_cols=25 Identities=24% Similarity=0.656 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2ytn_A 12 PYKCNE--CGKVFTQNSHLARHRGIHT 36 (46)
T ss_dssp SCBCTT--TCCBCSSHHHHHHHGGGTS
T ss_pred CeECCC--CCCeeCCHHHHHHHhhhcC
Confidence 589986 9999999999999987633
No 115
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=57.07 E-value=4.2 Score=29.17 Aligned_cols=25 Identities=24% Similarity=0.565 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|++.-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emf_A 12 HFECTE--CGKAFTRKSTLSMHQKIHT 36 (46)
T ss_dssp CEECSS--SCCEESCHHHHHHHGGGTS
T ss_pred CeECCC--CCchhCCHHHHHHHHHHhC
Confidence 589986 9999999999999998643
No 116
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.99 E-value=4.4 Score=28.47 Aligned_cols=24 Identities=25% Similarity=0.591 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (44)
T 2eof_A 12 PYECNE--CQKAFNTKSNLMVHQRTH 35 (44)
T ss_dssp SEECTT--TCCEESCHHHHHHHHHHT
T ss_pred CeECCC--CCcccCCHhHHHHHHHHh
Confidence 589986 999999999999999763
No 117
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.98 E-value=4.1 Score=29.01 Aligned_cols=25 Identities=20% Similarity=0.486 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2emm_A 12 PHKCNE--CGKSFIQSAHLIQHQRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred CeeCCC--CChhhCCHHHHHHHHHHhC
Confidence 589986 9999999999999987633
No 118
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.93 E-value=4.1 Score=28.99 Aligned_cols=25 Identities=28% Similarity=0.523 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eow_A 12 PYKCNE--CGKAFRARSSLAIHQATHS 36 (46)
T ss_dssp CEECTT--SCCEESSHHHHHHHHHHHC
T ss_pred Ceeccc--cCChhcCHHHHHHHHHHcC
Confidence 589986 9999999999999987633
No 119
>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.90 E-value=3.6 Score=27.95 Aligned_cols=23 Identities=17% Similarity=0.359 Sum_probs=20.3
Q ss_pred ccccCCCCCcccccch-hhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAA-EFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgp-EFVrKHI~n 578 (790)
-|.|.+ |+|.|... .-+..|+..
T Consensus 9 ~~~C~~--C~k~f~~~~~~L~~H~~~ 32 (37)
T 2elp_A 9 AMKCPY--CDFYFMKNGSDLQRHIWA 32 (37)
T ss_dssp CEECSS--SSCEECSSCHHHHHHHHH
T ss_pred CeECCC--CChhhccCHHHHHHHHHh
Confidence 489986 99999999 999999875
No 120
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A
Probab=56.89 E-value=4.4 Score=29.04 Aligned_cols=24 Identities=21% Similarity=0.605 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2emj_A 12 PFECAE--CGKSFSISSQLATHQRIH 35 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHHHHH
T ss_pred CEECCC--CCcccCCHHHHHHHHHHh
Confidence 589986 999999999999998763
No 121
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.67 E-value=5.3 Score=28.61 Aligned_cols=24 Identities=21% Similarity=0.490 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|++.-
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H 35 (46)
T 2elz_A 12 PYKCED--CGKGYNRRLNLDMHQRVH 35 (46)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHGGGG
T ss_pred CeeCcc--cCchhCCHHHHHHHHHhc
Confidence 589986 999999999999998753
No 122
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.49 E-value=4.5 Score=28.89 Aligned_cols=25 Identities=24% Similarity=0.464 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2emy_A 12 PYECHE--CGKAFSRKYQLISHQRTHA 36 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHT
T ss_pred CcCCCC--CCcccCcHHHHHHHHHHcC
Confidence 589986 9999999999999987633
No 123
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=56.31 E-value=4.2 Score=29.14 Aligned_cols=23 Identities=17% Similarity=0.512 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2em5_A 12 SHQCHE--CGRGFTLKSHLNQHQRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTT
T ss_pred CeECCc--CCCccCCHHHHHHHHHH
Confidence 589996 99999999999999876
No 124
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=56.22 E-value=4.2 Score=29.13 Aligned_cols=24 Identities=29% Similarity=0.569 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+.+|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2yto_A 12 PYKCSD--CGKAFTRKSGLHIHQQSH 35 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHH
T ss_pred CEECcc--cCCccCCHhHHHHHHHHc
Confidence 589986 999999999999998763
No 125
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=56.15 E-value=8.5 Score=32.03 Aligned_cols=26 Identities=23% Similarity=0.441 Sum_probs=17.0
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |+|.|....-+.+|+..-+.
T Consensus 73 ~~~C~~--C~~~f~~~~~L~~H~~~H~~ 98 (106)
T 2ee8_A 73 PFKCQE--CGKGFCQSRTLAVHKTLHMQ 98 (106)
T ss_dssp TTSCSS--SCCCCSSHHHHHHHHHHTTS
T ss_pred CeECCC--cCCcccCHHHHHHHHHHhCC
Confidence 467765 77777777777777665443
No 126
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=56.13 E-value=5.4 Score=29.93 Aligned_cols=26 Identities=31% Similarity=0.632 Sum_probs=22.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |.|.|....-+..|++..|.
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~~H~ 37 (54)
T 2eps_A 12 PYICQS--CGKGFSRPDHLNGHIKQVHT 37 (54)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHTSC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHhcC
Confidence 589986 99999999999999986664
No 127
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.77 E-value=4.8 Score=28.73 Aligned_cols=25 Identities=24% Similarity=0.416 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em7_A 12 PYKCEE--CGKGFICRRDLYTHHMVHT 36 (46)
T ss_dssp SEECSS--SCCEESCHHHHHHHGGGGT
T ss_pred CccCCC--ccchhCCHHHHHHHHHHhC
Confidence 689986 9999999999999987643
No 128
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}
Probab=55.62 E-value=8.1 Score=31.62 Aligned_cols=42 Identities=21% Similarity=0.396 Sum_probs=29.1
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++....+ ..|.|.+..|+|.|....-+..|+..-+.+
T Consensus 32 ~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~ 73 (100)
T 2ebt_A 32 HLKAHLRTHTGE---KPYKCTWEGCDWRFARSDELTRHYRKHTGA 73 (100)
T ss_dssp HHHHHHHHHSCC---CCEECCSSSCCCEESSHHHHHHHHHHHTSC
T ss_pred HHHHHHHHhCCC---CCeeCCCCCCCCccCCHHHHHHHHHHhCCC
Confidence 344455554433 368997556999999999999998765443
No 129
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.61 E-value=4.5 Score=28.91 Aligned_cols=24 Identities=25% Similarity=0.607 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ep0_A 12 PYKCDV--CHKSFRYGSSLTVHQRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTTT
T ss_pred CeeCcc--cCcccCChHHHHHHHHHh
Confidence 689986 999999999999998763
No 130
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.61 E-value=4.3 Score=28.99 Aligned_cols=24 Identities=25% Similarity=0.833 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ene_A 12 PYKCNE--CGKVFRHNSYLSRHQRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHTTT
T ss_pred CeECCC--CCchhCChHHHHHHHhhc
Confidence 689986 999999999999999863
No 131
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1
Probab=55.61 E-value=6.5 Score=32.77 Aligned_cols=39 Identities=28% Similarity=0.469 Sum_probs=29.3
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
|..+++....+ ..|.|.+ |.|.|....-+..|+...+.+
T Consensus 33 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 71 (106)
T 2ee8_A 33 LLIHERTHTDE---RPYTCDI--CHKAFRRQDHLRDHRYIHSKE 71 (106)
T ss_dssp HHHHHHHHCCS---CCCBCSS--SCCBCSCHHHHHHHGGGSCCC
T ss_pred HHHHHHHcCCC---CCcCCCC--ccchhCCHHHHHHHHHHhCCC
Confidence 34455554433 3699997 999999999999999876655
No 132
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=55.59 E-value=4.6 Score=28.58 Aligned_cols=24 Identities=25% Similarity=0.737 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.. |+|.|.....+..|+..-
T Consensus 10 ~~~C~~--C~k~f~~~~~L~~H~~~H 33 (44)
T 2emx_A 10 PFGCSC--CEKAFSSKSYLLVHQQTH 33 (44)
T ss_dssp CEECSS--SSCEESSHHHHHHHHHHH
T ss_pred CccCCC--CCcccCCHHHHHHHHHHh
Confidence 589986 999999999999998763
No 133
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.59 E-value=3.7 Score=28.58 Aligned_cols=25 Identities=24% Similarity=0.588 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 11 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 35 (42)
T 2ytb_A 11 PYRCDQ--CGKAFSQKGSLIVHIRVHT 35 (42)
T ss_dssp SBCCTT--TTCCBSSHHHHHTTGGGTS
T ss_pred CeeCCC--ccchhCCHHHHHHHHHHhC
Confidence 589986 9999999999999987633
No 134
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.58 E-value=3.7 Score=29.29 Aligned_cols=23 Identities=26% Similarity=0.668 Sum_probs=20.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eor_A 12 PYNCEE--CGKAFIHDSQLQEHQRI 34 (46)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH
T ss_pred CccCCC--CCCCcCCHHHHHHHHHh
Confidence 589986 99999999999999875
No 135
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.56 E-value=4.5 Score=28.79 Aligned_cols=23 Identities=26% Similarity=0.658 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2yts_A 12 PYICNE--CGKSFIQKSHLNRHRRI 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHGGG
T ss_pred CEECCC--CChhhCChHHHHHHHHh
Confidence 589986 99999999999999875
No 136
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=55.54 E-value=7 Score=32.86 Aligned_cols=40 Identities=25% Similarity=0.438 Sum_probs=30.1
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++....+ ..|.|.+ |+|.|....-+..|+...|.+
T Consensus 24 ~l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 63 (110)
T 2csh_A 24 QRDRHMSMHLGL---RPYGCGV--CGKKFKMKHHLVGHMKIHTGI 63 (110)
T ss_dssp HHHHHHHHHSCC---CSEECTT--TSCEESSSHHHHHHHTTTCCC
T ss_pred HHHHHHHHcCCC---cCccCCC--CCcccCCHHHHHHHHHHcCCC
Confidence 445566654443 3699986 999999999999999876654
No 137
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Probab=55.50 E-value=4.4 Score=28.86 Aligned_cols=24 Identities=29% Similarity=0.636 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|.....+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2el4_A 12 PYGCSQ--CAKTFSLKSQLIVHQRSH 35 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHGGGS
T ss_pred ceECCC--CCchhCCHHHHHHHHHHh
Confidence 589986 999999999999998763
No 138
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=55.25 E-value=4 Score=35.48 Aligned_cols=29 Identities=28% Similarity=0.393 Sum_probs=22.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChhHH
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPELV 584 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E~V 584 (790)
.|.|.. |+|.|....-+.+|+.+.|++.|
T Consensus 100 ~~~C~~--C~k~f~~~~~l~~H~~~h~~~~v 128 (129)
T 2wbt_A 100 TKVCPV--CKKEFTSTDSALDHVCKKHNICV 128 (129)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHTTCCCC
T ss_pred CCCCCC--CCcccCCHHHHHHHHHHHCCccC
Confidence 578875 88888888888888888777643
No 139
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.25 E-value=4.4 Score=28.58 Aligned_cols=24 Identities=29% Similarity=0.612 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (44)
T 2eoj_A 12 PYECCE--CGKVFSRKDQLVSHQKTH 35 (44)
T ss_dssp SCEETT--TTEECSSHHHHHHHHTTS
T ss_pred CeeCCC--CCCccCCHHHHHHHHHHc
Confidence 589986 999999999999998763
No 140
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}
Probab=55.24 E-value=5.1 Score=28.69 Aligned_cols=25 Identities=24% Similarity=0.529 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2el6_A 12 PYKCSQ--CEKSFSGKLRLLVHQRMHT 36 (46)
T ss_dssp SEECSS--SSCEESSHHHHHHHHGGGC
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 589986 9999999999999987643
No 141
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=55.17 E-value=7.2 Score=32.84 Aligned_cols=27 Identities=22% Similarity=0.428 Sum_probs=23.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |+|.|....-+.+|++..|..
T Consensus 69 ~~~C~~--C~~~f~~~~~L~~H~~~~H~~ 95 (107)
T 1wjp_A 69 KLTCLE--CMRTFKSSFSIWRHQVEVHNQ 95 (107)
T ss_dssp GGEEGG--GTEECSSHHHHHHHHHHTSCC
T ss_pred CccCcc--ccchhCCHHHHHHHHHHHcCC
Confidence 689986 999999999999999877754
No 142
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.16 E-value=4.6 Score=28.85 Aligned_cols=24 Identities=33% Similarity=0.602 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytj_A 12 PYICAE--CGKAFTIRSNLIKHQKIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHT
T ss_pred CeECCC--CChhhCCHHHHHHHHHHc
Confidence 589986 999999999999998763
No 143
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Probab=55.12 E-value=4.6 Score=28.86 Aligned_cols=24 Identities=29% Similarity=0.754 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ema_A 12 RYKCNE--CGKVFSRNSQLSQHQKIH 35 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHTGG
T ss_pred CcCCCC--CcchhCCHHHHHHHHHhc
Confidence 589986 999999999999998763
No 144
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=55.00 E-value=5.7 Score=28.32 Aligned_cols=24 Identities=21% Similarity=0.541 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2eoq_A 12 PFKCDI--CGKSFCGRSRLNRHSMVH 35 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHHT
T ss_pred CcCCCc--CCchhCCHHHHHHHHHHc
Confidence 589986 999999999999998763
No 145
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.84 E-value=4.5 Score=28.91 Aligned_cols=25 Identities=24% Similarity=0.634 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eq0_A 12 PYKCHE--CGKVFRRNSHLARHQLIHT 36 (46)
T ss_dssp CEECTT--TCCEESSHHHHHHHHTTTC
T ss_pred CeECCC--CCchhCCHHHHHHHHHHcC
Confidence 589986 9999999999999987633
No 146
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.71 E-value=4.9 Score=28.70 Aligned_cols=25 Identities=24% Similarity=0.708 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytk_A 12 PYKCNE--CGKVFTQNSHLTNHWRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHS
T ss_pred CEeCCc--CCCccCCHHHHHHHHHHHC
Confidence 589986 9999999999999987633
No 147
>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}
Probab=54.69 E-value=4.8 Score=29.81 Aligned_cols=25 Identities=24% Similarity=0.616 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|.....+..|+..-+
T Consensus 4 ~~~C~~--C~~~f~~~~~l~~H~~~h~ 28 (57)
T 3uk3_C 4 SRECSY--CGKFFRSNYYLNIHLRTHT 28 (57)
T ss_dssp -CBCTT--TCCBCSCHHHHHHHHHHHH
T ss_pred CccCCC--CcchhCChHHHHHHHHHcC
Confidence 689986 9999999999999998633
No 148
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A
Probab=54.44 E-value=6.1 Score=29.23 Aligned_cols=26 Identities=23% Similarity=0.530 Sum_probs=22.0
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 1 p~~C~~--C~~~f~~~~~l~~H~~~h~~ 26 (57)
T 1bbo_A 1 KYICEE--CGIRXKKPSMLKKHIRTHTD 26 (57)
T ss_dssp CCBCTT--TCCBCSSHHHHHHHHHHTSS
T ss_pred CCcCCC--CcCcCCCHHHHHHHHHhcCC
Confidence 378986 99999999999999987444
No 149
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.43 E-value=4 Score=29.20 Aligned_cols=23 Identities=35% Similarity=0.605 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2emh_A 12 PYICTV--CGKAFTDRSNLIKHQKI 34 (46)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH
T ss_pred CcCCCC--CCchhCCHHHHHHHHHh
Confidence 589986 99999999999999875
No 150
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=54.38 E-value=4.8 Score=28.72 Aligned_cols=26 Identities=19% Similarity=0.474 Sum_probs=22.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.. |.|.|....-+..|++.-+.
T Consensus 10 ~~~C~~--C~k~f~~~~~l~~H~~~H~~ 35 (45)
T 2epq_A 10 PYSCPV--CGLRFKRKDRMSYHVRSHDG 35 (45)
T ss_dssp SSEETT--TTEECSCHHHHHHHHHHHSC
T ss_pred CCcCCC--CCcccCCHHHHHHHHHHccC
Confidence 689986 99999999999999977443
No 151
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.37 E-value=4.3 Score=29.01 Aligned_cols=25 Identities=28% Similarity=0.703 Sum_probs=21.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2en6_A 12 PYGCNE--CGKTFSQKSILSAHQRTHT 36 (46)
T ss_dssp CEEETT--TTEEESSHHHHHHHHHHHS
T ss_pred CeECCC--CCcccCchHHHHHHHHHcC
Confidence 589986 9999999999999998643
No 152
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.31 E-value=5 Score=28.84 Aligned_cols=23 Identities=30% Similarity=0.598 Sum_probs=21.0
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2ytm_A 12 PYKCME--CGKAFGDNSSCTQHQRL 34 (46)
T ss_dssp SSSBTT--TTBCCSSHHHHHHHHHH
T ss_pred CcCCCC--CCchhCCHHHHHHHHHH
Confidence 589986 99999999999999876
No 153
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=54.21 E-value=7.6 Score=31.58 Aligned_cols=39 Identities=18% Similarity=0.312 Sum_probs=28.8
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
|..+++....+ ..|.|.+ |.|.|....-+.+|+...|.+
T Consensus 23 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 61 (95)
T 2yt9_A 23 LNRHKLSHSGE---KPYSCPV--CGLRFKRKDRMSYHVRSHDGS 61 (95)
T ss_dssp HHHHHHHSCSS---CSEECSS--SCCEESCHHHHHHHHHHHCCC
T ss_pred HHHHHHhcCCC---CCCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 44455543333 3689986 999999999999999877654
No 154
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.16 E-value=4.3 Score=29.00 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=20.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2en3_A 12 PFQCKE--CGMNFSWSCSLFKHLRS 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHHHH
T ss_pred CeeCcc--cChhhCCHHHHHHHHHH
Confidence 589986 99999999999999865
No 155
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Probab=54.08 E-value=5.6 Score=32.44 Aligned_cols=39 Identities=23% Similarity=0.392 Sum_probs=27.5
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
|..+++....+ ..|.|.+ |+|.|....-+.+|+...+.+
T Consensus 24 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 62 (96)
T 2dmd_A 24 LKTHMRCHTGV---KPYKCKT--CDYAAADSSSLNKHLRIHSDE 62 (96)
T ss_dssp HHHHGGGCCCC---CSEECSS--SCCEESSHHHHHHHHHHSCCC
T ss_pred HHHHHHhcCCC---CCEeCCC--CCCccCCHHHHHHHHHHhCCC
Confidence 34455543333 3689986 999999999999999875544
No 156
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.05 E-value=5.4 Score=28.36 Aligned_cols=25 Identities=24% Similarity=0.534 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2eme_A 12 PYVCDY--CGKAFGLSAELVRHQRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHGGGC
T ss_pred CeECCC--CChhhCCHHHHHHHHHhcC
Confidence 589986 9999999999999997533
No 157
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=54.02 E-value=4 Score=29.14 Aligned_cols=23 Identities=26% Similarity=0.540 Sum_probs=21.0
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+.+|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2emp_A 12 PYMCNE--CGKAFSVYSSLTTHQVI 34 (46)
T ss_dssp SEECSS--SCCEESCHHHHHHHHHH
T ss_pred CeECCC--CCchhCCHHHHHHHHHH
Confidence 589986 99999999999999875
No 158
>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*
Probab=54.02 E-value=5 Score=30.01 Aligned_cols=27 Identities=22% Similarity=0.509 Sum_probs=22.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |+|.|....-+..|+..-+.|
T Consensus 24 ~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 50 (54)
T 1yui_A 24 PATCPI--CYAVIRQSRNLRRHLELRHFA 50 (54)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHHTTT
T ss_pred CccCCC--CCcccCCHHHHHHHHHHhccC
Confidence 589986 999999999999999764433
No 159
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A
Probab=53.89 E-value=6.2 Score=28.25 Aligned_cols=25 Identities=28% Similarity=0.497 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ely_A 12 PFKCVE--CGKGFSRRSALNVHHKLHT 36 (46)
T ss_dssp SBCCSS--SCCCBSSTTHHHHHHHHHS
T ss_pred CcccCc--cCcccCCHHHHHHHHHHcC
Confidence 589986 9999999999999987633
No 160
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Probab=53.82 E-value=5.1 Score=28.48 Aligned_cols=24 Identities=33% Similarity=0.665 Sum_probs=21.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.. |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2em9_A 12 PYNCKE--CGKSFRWASCLLKHQRVH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHGGGG
T ss_pred CeECCc--cccccCChHHHHHHHHHh
Confidence 689986 999999999999998763
No 161
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.64 E-value=5.5 Score=28.34 Aligned_cols=25 Identities=24% Similarity=0.689 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (46)
T 2eoe_A 12 PYKCNE--CGKVFTQNSHLANHQRIHT 36 (46)
T ss_dssp SSEETT--TTEECSSHHHHHHHHGGGS
T ss_pred CeECCC--cChhhCCHHHHHHHHHHcC
Confidence 689986 9999999999999987633
No 162
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=53.62 E-value=6.6 Score=28.10 Aligned_cols=23 Identities=30% Similarity=0.661 Sum_probs=20.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.. |.|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2emz_A 12 PFKCNE--CGKGFGRRSHLAGHLRL 34 (46)
T ss_dssp SCCCSS--SCCCCSSHHHHHHHHHH
T ss_pred CeECCC--CCcccCCHHHHHHHHHH
Confidence 589986 99999999999999875
No 163
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.50 E-value=7 Score=33.13 Aligned_cols=27 Identities=15% Similarity=0.221 Sum_probs=24.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |+|.|....-+.+|++..|..
T Consensus 80 ~~~C~~--C~k~f~~~~~L~~H~~~hh~~ 106 (115)
T 2dmi_A 80 VLKCMY--CGHSFESLQDLSVHMIKTKHY 106 (115)
T ss_dssp SCBCSS--SCCBCSSHHHHHHHHHHTTTT
T ss_pred ceECCC--CCCccCCHHHHHHHHHHhCCc
Confidence 689986 999999999999999988865
No 164
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=53.27 E-value=11 Score=29.69 Aligned_cols=25 Identities=32% Similarity=0.693 Sum_probs=16.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|...+|+|.|....-+..|+..
T Consensus 31 ~~~C~~~~C~~~f~~~~~l~~H~~~ 55 (85)
T 2j7j_A 31 PYECPHEGCDKRFSLPSRLKRHEKV 55 (85)
T ss_dssp CEECCSTTCCCEESSHHHHHHHHHH
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHH
Confidence 4667655577777777777777654
No 165
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=53.22 E-value=4.8 Score=28.48 Aligned_cols=25 Identities=16% Similarity=0.647 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (44)
T 2yu5_A 12 PFKCSK--CDRVFTQRNYLVQHERTHA 36 (44)
T ss_dssp SEECSS--SSCEESSSHHHHHHHHHCC
T ss_pred CeECCC--CCchhCCHHHHHHHhHhcC
Confidence 589986 9999999999999987643
No 166
>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A
Probab=52.80 E-value=12 Score=29.43 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=27.6
Q ss_pred hhhHHHHhhhhcccCcccccCCCC-CcccccchhhHHHHHhhhC
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKG-CTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~g-CtKLFKgpEFVrKHI~nKH 580 (790)
.|..+++..+. |.|.... |+|.|+...-+.+|++..|
T Consensus 48 ~l~~H~~~h~~------~~C~~~~~C~~~f~~~~~l~~H~~~hh 85 (85)
T 2j7j_A 48 RLKRHEKVHAG------YPCKKDDSCSFVGKTWTLYLKHVAECH 85 (85)
T ss_dssp HHHHHHHHHHS------EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred HHHHHHHHhCC------CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence 34456555331 8898655 9999999999999998765
No 167
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.38 E-value=5.5 Score=28.42 Aligned_cols=25 Identities=28% Similarity=0.635 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ep2_A 12 PYECSI--CGKSFTKKSQLHVHQQIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHTTS
T ss_pred CcCCCC--CCcccCCHHHHHHHHHHhC
Confidence 589986 9999999999999997533
No 168
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=52.36 E-value=5.4 Score=28.57 Aligned_cols=25 Identities=24% Similarity=0.632 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2em2_A 12 PFKCKE--CGKAFRQNIHLASHLRIHT 36 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHHC
T ss_pred CEECCc--CCchhCCHHHHHHHHHHhC
Confidence 589986 9999999999999987633
No 169
>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=52.27 E-value=5.6 Score=28.12 Aligned_cols=24 Identities=25% Similarity=0.646 Sum_probs=21.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.. |+|.|.....+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (44)
T 2emb_A 12 RYECSK--CQATFNLRKHLIQHQKTH 35 (44)
T ss_dssp SEECTT--TCCEESCHHHHHHHGGGG
T ss_pred CeECCC--CCCccCCHHHHHHHHHHc
Confidence 589986 999999999999999763
No 170
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}
Probab=57.56 E-value=3 Score=26.06 Aligned_cols=23 Identities=26% Similarity=0.585 Sum_probs=19.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.. |+|.|....-+..|+..
T Consensus 2 p~~C~~--C~k~f~~~~~l~~H~~~ 24 (26)
T 2lvu_A 2 PYVCER--CGKRFVQSSQLANHIRH 24 (26)
Confidence 367985 99999999999999865
No 171
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Probab=52.24 E-value=8.2 Score=30.93 Aligned_cols=39 Identities=15% Similarity=0.428 Sum_probs=28.5
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|..+++....+ ..|.|.+ |+|.|....-+..|+...+.
T Consensus 21 ~l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~h~~ 59 (90)
T 1a1h_A 21 SLTRHIRIHTGQ---KPFQCRI--CMRNFSRSDHLTTHIRTHTG 59 (90)
T ss_dssp HHHHHHHHHHCC---CCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCC---CCccCCC--CCcccCCHHHHHHHHHHcCC
Confidence 344555554443 3689986 99999999999999986544
No 172
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=52.16 E-value=5.6 Score=35.51 Aligned_cols=42 Identities=21% Similarity=0.423 Sum_probs=30.5
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++....+ ..|.|.+.+|+|.|....-+.+|++.-|.|
T Consensus 107 ~L~~H~~~h~~~---~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~ 148 (155)
T 2rpc_A 107 NLKIHKRTHTGE---KPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148 (155)
T ss_dssp HHHHHHTTTCSS---CSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred HHHHHHHhhCCC---CCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence 344555554433 258998777999999999999999875554
No 173
>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=51.93 E-value=8.7 Score=33.37 Aligned_cols=28 Identities=25% Similarity=0.491 Sum_probs=24.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
-|.|...+|+|-|.-..-+..|++..|.
T Consensus 27 PYkC~~~~CgKaFsr~s~L~~H~rriHT 54 (73)
T 1x3c_A 27 PYRCVHQGCFAAFTIQQNLILHYQAVHK 54 (73)
T ss_dssp SCBCCSTTCCCBCSSHHHHHHHHHHHSS
T ss_pred CeECCCCCcChhHcCHHHHHHHhhhhCC
Confidence 4999878899999999999999976675
No 174
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Probab=51.81 E-value=6.8 Score=29.94 Aligned_cols=25 Identities=20% Similarity=0.611 Sum_probs=23.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|....-+..|+...|
T Consensus 10 ~~~C~~--C~k~f~~~~~l~~H~~~~H 34 (66)
T 2drp_A 10 TYRCKV--CSRVYTHISNFCRHYVTSH 34 (66)
T ss_dssp EEECTT--TCCEESSHHHHHHHHHHHS
T ss_pred ceECCC--CcchhCCHHHHHHHHHHHc
Confidence 689986 9999999999999999888
No 175
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=51.78 E-value=12 Score=29.87 Aligned_cols=35 Identities=23% Similarity=0.491 Sum_probs=24.2
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhh
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
|..+++....+ ..|.|.+ |+|.|....-+.+|++.
T Consensus 53 l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~ 87 (89)
T 2wbs_A 53 LTRHYRKHTGH---RPFQCQK--CDRAFSRSDHLALHMKR 87 (89)
T ss_dssp HHHHHHHHHCC---CCEECSS--SSCEESSHHHHHHHGGG
T ss_pred HHHHHHHcCCC---CCccCCC--CCcccCCHHHHHHHHHh
Confidence 34455444444 2588885 88999988888888764
No 176
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1
Probab=51.75 E-value=7 Score=29.29 Aligned_cols=26 Identities=23% Similarity=0.618 Sum_probs=22.0
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.. |+|.|....-+..|+..-+.
T Consensus 2 ~~~C~~--C~~~f~~~~~l~~H~~~h~~ 27 (60)
T 2adr_A 2 SFVCEV--CTRAFARQEHLKRHYRSHTN 27 (60)
T ss_dssp CBCCTT--TCCCBSCHHHHHHHHHTTTS
T ss_pred cCcCCC--CccccCCHHHHHHHHHHhCC
Confidence 478986 99999999999999987443
No 177
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1
Probab=51.45 E-value=4.9 Score=31.41 Aligned_cols=26 Identities=19% Similarity=0.724 Sum_probs=22.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+..|+|.|....-+..|+..-
T Consensus 19 ~~~C~~~~C~k~f~~~~~l~~H~~~h 44 (73)
T 1f2i_G 19 PYACPVESCDRRFSRSDELTRHIRIH 44 (73)
T ss_dssp CEECSSTTBCCEESSHHHHHHHHHHH
T ss_pred ccCCcCCCCCCccCCHHHHHHHHHhh
Confidence 69998777999999999999998753
No 178
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=51.39 E-value=5.5 Score=28.51 Aligned_cols=23 Identities=39% Similarity=0.759 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.. |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2eoo_A 12 PYGCNE--CGKNFGRHSHLIEHLKR 34 (46)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHH
T ss_pred CEEccc--cCcccCCHHHHHHHHHH
Confidence 589986 99999999999999876
No 179
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.87 E-value=5.8 Score=28.39 Aligned_cols=23 Identities=22% Similarity=0.759 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|.....+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2eoy_A 12 CFKCNK--CEKTFSCSKYLTQHERI 34 (46)
T ss_dssp CEECSS--SCCEESSSHHHHHHHTT
T ss_pred CEECcC--CCCcCCCHHHHHHHHHH
Confidence 589986 99999999999999875
No 180
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.61 E-value=3.3 Score=29.35 Aligned_cols=25 Identities=28% Similarity=0.651 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|.....+..|+..-+
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~H~ 36 (44)
T 2eox_A 12 SYNCNE--CGKAFTRIFHLTRHQKIHT 36 (44)
T ss_dssp CEEETT--TTEEESSSHHHHTTHHHHC
T ss_pred CeECcc--cCcccCCHHHHHHHHHHhC
Confidence 589986 9999999999999987643
No 181
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=50.56 E-value=5.8 Score=28.18 Aligned_cols=25 Identities=20% Similarity=0.376 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2en8_A 12 SHTCDE--CGKNFCYISALRIHQRVHM 36 (46)
T ss_dssp SEECTT--TCCEESSHHHHHHHHTTTC
T ss_pred CeECCC--cCcccCCHHHHHHHHHHhC
Confidence 589986 9999999999999987533
No 182
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=50.06 E-value=5.1 Score=28.58 Aligned_cols=24 Identities=25% Similarity=0.506 Sum_probs=21.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ysp_A 12 PYKCEK--CGKGYNSKFNLDMHQKVH 35 (46)
T ss_dssp SEEETT--TTEEESCHHHHHHHHTTS
T ss_pred CeECCC--CCCccCCHHHHHHHHHhh
Confidence 689986 999999999999999763
No 183
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.59 E-value=6.4 Score=28.08 Aligned_cols=25 Identities=20% Similarity=0.380 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2yso_A 12 SHQCRE--CGEIFFQYVSLIEHQVLHM 36 (46)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHHHS
T ss_pred CEEccc--cChhhCCHHHHHHHHHHhC
Confidence 589986 9999999999999987633
No 184
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=49.49 E-value=5.8 Score=28.29 Aligned_cols=25 Identities=24% Similarity=0.619 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|....-+.+|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2en1_A 12 PFKCEE--CGKRFTQNSQLHSHQRVHT 36 (46)
T ss_dssp SEEETT--TTEEESSHHHHHHHGGGGS
T ss_pred CeeCCC--CCcccCCHHHHHHHHHHcC
Confidence 589986 9999999999999997633
No 185
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=49.32 E-value=10 Score=31.85 Aligned_cols=36 Identities=17% Similarity=0.433 Sum_probs=21.8
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|..+++....+ ..|.|.+ |+|.|....-+..|+..
T Consensus 53 ~l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~l~~H~~~ 88 (119)
T 2jp9_A 53 QLKRHQRRHTGV---KPFQCKT--CQRKFSRSDHLKTHTRT 88 (119)
T ss_dssp HHHHHHHHHHCC---CCEECTT--TCCEESCHHHHHHHHHH
T ss_pred HHHHHHHHcCCC---CCccCCc--cCchhCCHHHHHHHHHH
Confidence 344455544333 2467765 77777777777777764
No 186
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A
Probab=48.96 E-value=7.2 Score=31.21 Aligned_cols=25 Identities=24% Similarity=0.583 Sum_probs=12.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+.+|+|.|....-+..|+..
T Consensus 5 ~~~C~~~~C~~~f~~~~~l~~H~~~ 29 (89)
T 2wbs_A 5 THTCDYAGCGKTYTKSSHLKAHLRT 29 (89)
T ss_dssp CEECCSTTTCCEESSHHHHHHHHTT
T ss_pred CeeCCCCCCCCcCCCHHHHHHHHHh
Confidence 3445444455555555555555443
No 187
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.82 E-value=6.6 Score=28.06 Aligned_cols=25 Identities=20% Similarity=0.498 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+..|+|.|....-+..|+..
T Consensus 12 ~~~C~~~~C~k~f~~~~~L~~H~~~ 36 (48)
T 2ent_A 12 PFACTWPGCGWRFSRSDELSRHRRS 36 (48)
T ss_dssp CEECCSSSCCCEESSHHHHHHHHTT
T ss_pred CeECCCCCCCCccCCHHHHHHHHHH
Confidence 5899744599999999999999876
No 188
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=48.66 E-value=8 Score=30.40 Aligned_cols=28 Identities=21% Similarity=0.393 Sum_probs=23.4
Q ss_pred cccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 553 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 553 ~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
..|.|.. |+|.|....-+..|+..-+.+
T Consensus 16 ~~~~C~~--C~k~f~~~~~l~~H~~~H~~~ 43 (74)
T 2lce_A 16 KPYKCDR--CQASFRYKGNLASHKTVHTGE 43 (74)
T ss_dssp CSBCCTT--SSCCBSCHHHHHHHHHHHCCC
T ss_pred CCeECCC--CCceeCCHHHHHHHHHHcCCC
Confidence 3699986 999999999999999765443
No 189
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=48.40 E-value=6.7 Score=27.94 Aligned_cols=24 Identities=29% Similarity=0.776 Sum_probs=21.2
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK 579 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK 579 (790)
.|.|.+ |+|.|....-+..|+..-
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H 35 (46)
T 2ytd_A 12 PYKCSE--CGKAFHRHTHLNEHRRIH 35 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHHH
T ss_pred CeECCC--CCCeeCChHHHHHHHHHc
Confidence 589986 999999999999998753
No 190
>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*
Probab=48.01 E-value=12 Score=33.99 Aligned_cols=40 Identities=28% Similarity=0.405 Sum_probs=30.7
Q ss_pred hhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChhH
Q 003865 539 LDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPEL 583 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E~ 583 (790)
|..+++..+.| -.|.|.+ |+|.|.....+.+|++.-|.+.
T Consensus 66 L~~H~~~H~~~---k~~~C~~--C~k~F~~~~~L~~H~~~hh~~~ 105 (133)
T 2lt7_A 66 RTKHEIHHTGE---RRYQCLA--CGKSFINYQFMSSHIKSVHSQD 105 (133)
T ss_dssp HHHHHHHHHTC---CCEEESS--SCCEESSHHHHHHHHHHHTCCC
T ss_pred hhhhccccCCC---ccccCCC--CCCCcCCHHHHHHHhHHhcCCC
Confidence 34455554444 2589986 9999999999999999998763
No 191
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.70 E-value=4.6 Score=28.83 Aligned_cols=25 Identities=20% Similarity=0.650 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (46)
T 2ytg_A 12 PFKCGE--CGKSYNQRVHLTQHQRVHT 36 (46)
T ss_dssp SEECTT--TCCEESSSHHHHTTGGGGS
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcC
Confidence 689986 9999999999999987633
No 192
>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}
Probab=47.57 E-value=17 Score=29.61 Aligned_cols=28 Identities=18% Similarity=0.334 Sum_probs=25.6
Q ss_pred cccccCCCCCcccccchhhHHHHHhhhC
Q 003865 553 WKYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 553 ~KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
..|.|.-.+|+..|+...=+..||+.||
T Consensus 37 ~~~~C~W~~C~~~~~~~~~L~~Hir~~H 64 (64)
T 1zw8_A 37 EPLACNWEDCDFLGDDTASIVNHINAQH 64 (64)
T ss_dssp CCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred CCCEeeCCCCcCCCCChHHHHhhccccC
Confidence 4799999999999999988999999988
No 193
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=47.01 E-value=6.9 Score=27.80 Aligned_cols=23 Identities=22% Similarity=0.348 Sum_probs=21.0
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~F~~~~~L~~H~~~ 34 (46)
T 2epw_A 12 PCKCTE--CGKAFCWKSQLIMHQRT 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHHHH
T ss_pred CeeCCC--CCCccCCHHHHHHHHHH
Confidence 589986 99999999999999976
No 194
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=46.80 E-value=6.1 Score=28.28 Aligned_cols=23 Identities=22% Similarity=0.414 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2em8_A 12 PYKCVE--CGKGYKRRLDLDFHQRV 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CeECcc--cCchhCCHHHHHHHHHH
Confidence 589986 99999999999999876
No 195
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=46.80 E-value=7.3 Score=27.75 Aligned_cols=23 Identities=22% Similarity=0.420 Sum_probs=20.9
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2enc_A 12 PFKCEE--CGKGFYTNSQCYSHQRS 34 (46)
T ss_dssp SEECSS--SCCEESSHHHHHHHHHH
T ss_pred CcCCCC--CCCcCCChHHHHHHHHH
Confidence 589986 99999999999999875
No 196
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=46.74 E-value=6.3 Score=28.64 Aligned_cols=25 Identities=20% Similarity=0.502 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+ |+|.|....-+..|+..-+
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 36 (48)
T 2epr_A 12 QVACEI--CGKIFRDVYHLNRHKLSHS 36 (48)
T ss_dssp SEEETT--TTEEESSHHHHHHHGGGSC
T ss_pred CeeCCC--CCcccCCHHHHHHHHHhcC
Confidence 689986 9999999999999987643
No 197
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=46.52 E-value=8 Score=30.75 Aligned_cols=27 Identities=30% Similarity=0.684 Sum_probs=24.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |.|.|....-+..|+...|.+
T Consensus 15 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~ 41 (86)
T 1x6h_A 15 PYACSH--CDKTFRQKQLLDMHFKRYHDP 41 (86)
T ss_dssp CEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred CCcCCC--CCCccCCHHHHHHHHHHhcCC
Confidence 589996 999999999999999988865
No 198
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=46.46 E-value=12 Score=31.53 Aligned_cols=28 Identities=18% Similarity=0.371 Sum_probs=23.3
Q ss_pred cccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 553 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 553 ~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
..|.|.+ |+|.|....-+..|+..-|.+
T Consensus 65 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~ 92 (124)
T 2dlq_A 65 QVFTCSV--CQETFRRRMELRLHMVSHTGE 92 (124)
T ss_dssp CCEECSS--SCCEESSHHHHHHHHHHHSSS
T ss_pred CCeECCC--CCCccCCHHHHHHHHHHcCCC
Confidence 4689986 999999999999999876554
No 199
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=46.42 E-value=8 Score=30.06 Aligned_cols=27 Identities=11% Similarity=0.308 Sum_probs=23.0
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|.|.+ |+|.|....-+..|+..-+.+
T Consensus 9 ~~~C~~--C~k~f~~~~~L~~H~~~H~~~ 35 (70)
T 1x5w_A 9 PEKCSE--CSYSCSSKAALRIHERIHCTD 35 (70)
T ss_dssp SEECSS--SSCEESSHHHHHHHHGGGCCS
T ss_pred CeECCC--CCcccCCHHHHHHHHHHcCCC
Confidence 689986 999999999999999874433
No 200
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=45.81 E-value=5.7 Score=27.69 Aligned_cols=23 Identities=22% Similarity=0.587 Sum_probs=20.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.. |+|.|....-+..|+..
T Consensus 11 ~~~C~~--C~k~f~~~~~L~~H~~~ 33 (42)
T 2en2_A 11 PYKCET--CGARFVQVAHLRAHVLI 33 (42)
T ss_dssp SEECTT--TCCEESSHHHHHHHTHH
T ss_pred CEeCCC--cChhhCCHHHHHHHHHH
Confidence 589986 99999999999999875
No 201
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=45.66 E-value=7.8 Score=30.40 Aligned_cols=26 Identities=27% Similarity=0.664 Sum_probs=22.5
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 14 ~~~C~~--C~k~f~~~~~L~~H~~~h~~ 39 (72)
T 1x6e_A 14 PYGCVE--CGKAFSRSSILVQHQRVHTG 39 (72)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHGGGC
T ss_pred CccCCC--CCCccCCHHHHHHHHHhcCC
Confidence 689986 99999999999999986443
No 202
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Probab=44.50 E-value=13 Score=32.93 Aligned_cols=42 Identities=31% Similarity=0.480 Sum_probs=30.6
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++....+ ..|.|.+.+|+|.|....-+.+|+...|..
T Consensus 84 ~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~ 125 (155)
T 2gli_A 84 NLKTHLRSHTGE---KPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125 (155)
T ss_dssp HHHHHHHHTTTC---CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred HHHHHHHHcCCC---CCeeCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence 344555554443 368998777999999999999999777753
No 203
>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}
Probab=44.15 E-value=8.2 Score=33.01 Aligned_cols=28 Identities=25% Similarity=0.383 Sum_probs=24.3
Q ss_pred cccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 553 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 553 ~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
..|.|.+ |+|.|....-+.+|++.-|.|
T Consensus 27 ~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~ 54 (85)
T 2lv2_A 27 ECHLCPV--CGESFASKGAQERHLRLLHAA 54 (85)
T ss_dssp TTEECTT--SCCEESSHHHHHHHHHTTSCS
T ss_pred CCEECCC--CCCCcCcHHHHhhhhhhccCC
Confidence 3689996 999999999999999886665
No 204
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=43.44 E-value=25 Score=37.51 Aligned_cols=47 Identities=19% Similarity=0.237 Sum_probs=41.7
Q ss_pred CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 003865 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEW 272 (790)
Q Consensus 225 lmsFKQFl~~~~DdIspeEA~~rYqEYK~ef~~~Qi~~FFe~HKdEeW 272 (790)
-+=||||+..++-.++-+||+..-..=-..|.++|+. +|....+-.|
T Consensus 248 aIGYkE~~~yL~G~~s~~eai~~~~~~TR~yAKRQ~T-WfR~~~~~~w 294 (316)
T 3foz_A 248 CVGYRQMWSYLEGEISYDEMVYRGVCATRQLAKRQIT-WLRGWEGVHW 294 (316)
T ss_dssp STTHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHH-HHHSCSSCEE
T ss_pred eeehhhHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHH-HhCCCCCCeE
Confidence 5779999999999999999999888888889999974 8888888889
No 205
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Probab=42.88 E-value=15 Score=32.65 Aligned_cols=39 Identities=26% Similarity=0.436 Sum_probs=28.8
Q ss_pred HHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 541 PFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 541 ~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.+++....+ ..|.|.+..|+|.|....-+..|+..-+.+
T Consensus 80 ~H~~~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~ 118 (155)
T 2rpc_A 80 NHIRVHTGE---KPFPCPFPGCGKIFARSENLKIHKRTHTGE 118 (155)
T ss_dssp HHTHHHHCC---CSEECSCTTTCCEESCHHHHHHHHTTTCSS
T ss_pred HHHHhcCCC---CcccCCcCCCCCccCCHHHHHHHHHhhCCC
Confidence 344444333 368998778999999999999999865543
No 206
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Probab=42.73 E-value=14 Score=30.98 Aligned_cols=39 Identities=23% Similarity=0.436 Sum_probs=28.3
Q ss_pred HhhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhh
Q 003865 537 DALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 537 e~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
..|..+++....+ ..|.|....|+|.|....-+.+|++.
T Consensus 80 ~~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~L~~H~~~ 118 (119)
T 2jp9_A 80 DHLKTHTRTHTGE---KPFSCRWPSCQKKFARSDELVRHHNM 118 (119)
T ss_dssp HHHHHHHHHHHTC---CCEECCSTTCCCEESSHHHHHHHHHT
T ss_pred HHHHHHHHHhcCC---CCeeCCCCCCccccCCHHHHHHHHhc
Confidence 3556677665544 25899444599999999999999864
No 207
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=42.40 E-value=13 Score=32.86 Aligned_cols=26 Identities=27% Similarity=0.445 Sum_probs=16.2
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.. |+|.|+...-+..|+...|.
T Consensus 50 pf~C~~--Cgk~F~~~~~L~~H~~r~Ht 75 (102)
T 2ghf_A 50 SYVCVE--CNFLTKRYDALSEHNLKYHP 75 (102)
T ss_dssp CEEETT--TTEEESSTHHHHTHHHHTST
T ss_pred CcCCCC--CCcccCCHHHHHHHHHHhcC
Confidence 366764 77777777777777444443
No 208
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Probab=42.20 E-value=11 Score=32.14 Aligned_cols=27 Identities=22% Similarity=0.559 Sum_probs=21.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.+..|+|.|....-+..|+..-+
T Consensus 62 ~~~C~~~~C~~~f~~~~~l~~H~~~h~ 88 (124)
T 1ubd_C 62 PFQCTFEGCGKRFSLDFNLRTHVRIHT 88 (124)
T ss_dssp CEECCSTTCCCEESCHHHHHHHHHHHH
T ss_pred CeeCCCCCCcCccCCHHHHHHHHHHhC
Confidence 588876679999999888888887543
No 209
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=41.95 E-value=14 Score=30.49 Aligned_cols=26 Identities=27% Similarity=0.483 Sum_probs=22.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
-|.|.. |.|.|.....+.+|++.-+.
T Consensus 13 py~C~~--CgK~F~~~s~L~~H~r~Htg 38 (66)
T 2epp_A 13 ILPCGL--CGKVFTDANRLRQHEAQHGV 38 (66)
T ss_dssp CCCCTT--TCCCCSCHHHHHHHHHHHTT
T ss_pred CcCCCC--CCCccCCHHHHHhhhhhhCC
Confidence 589985 99999999999999987444
No 210
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=41.56 E-value=15 Score=29.95 Aligned_cols=27 Identities=15% Similarity=0.313 Sum_probs=21.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
++.|.. |+|.|....-+..|+...|..
T Consensus 25 ~~~C~~--C~k~f~~~~~L~~H~~~~H~~ 51 (95)
T 2ej4_A 25 SRPKKS--CDRTFSTMHELVTHVTMEHVG 51 (95)
T ss_dssp SSSCCC--CCCCCSSHHHHHHHHHHTTTC
T ss_pred CCcccc--cccccCCHHHHHHHHHHhccC
Confidence 455764 999999999999999887754
No 211
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=41.15 E-value=7.2 Score=27.77 Aligned_cols=23 Identities=26% Similarity=0.749 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+..|+..
T Consensus 12 ~~~C~~--C~k~f~~~~~L~~H~~~ 34 (46)
T 2yu8_A 12 PYKCNE--CGKVFTQNSHLARHRRV 34 (46)
T ss_dssp SEECSS--SCCEESSSHHHHHHTHH
T ss_pred CeECCc--CCchhCCHHHHHHHHHh
Confidence 589986 99999999999999865
No 212
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=40.42 E-value=19 Score=33.24 Aligned_cols=40 Identities=23% Similarity=0.382 Sum_probs=27.5
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhChh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHPE 582 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E 582 (790)
.|..+++....+ -.|.|.+ |+|.|....-+.+|++.-|.|
T Consensus 148 ~L~~H~~~H~~~---~~~~C~~--C~~~f~~~~~L~~H~~~H~~~ 187 (190)
T 2i13_A 148 NLHTHQRTHTGE---KPYKCPE--CGKSFSRRDALNVHQRTHTGK 187 (190)
T ss_dssp HHHHHHHHHHCC---CCEECTT--TCCEESSHHHHHHHHTTC---
T ss_pred HHHHHHHhcCCC---CCeECCC--CCCccCCHHHHHHHHHhcCCC
Confidence 445566665544 2688986 999999999999998875554
No 213
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=39.85 E-value=19 Score=29.26 Aligned_cols=22 Identities=23% Similarity=0.309 Sum_probs=20.2
Q ss_pred cccCCCCCcccccchhhHHHHHhh
Q 003865 555 YGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 555 wrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
|.|.. |+|.|....-+..|++.
T Consensus 63 ~~C~~--C~k~f~~~~~L~~H~~~ 84 (95)
T 2ej4_A 63 EECPR--EGKSFKAKYKLVNHIRV 84 (95)
T ss_dssp TTCSS--TTCCCSSHHHHHHHHHH
T ss_pred cCCCC--CCcccCCHHHHHHHHHh
Confidence 78986 99999999999999976
No 214
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=38.15 E-value=23 Score=28.31 Aligned_cols=38 Identities=29% Similarity=0.470 Sum_probs=29.5
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|..+++..+.|+ .|.|.. |+|.|....-+.+|++. |.
T Consensus 19 ~L~~H~~~Ht~ek---p~~C~~--C~k~F~~~~~L~~H~~~-Ht 56 (60)
T 4gzn_C 19 GLSRHRRAHLGYR---PRSCPE--CGKCFRDQSEVNRHLKV-HQ 56 (60)
T ss_dssp HHHHHHHHHHTCC---CEECTT--TCCEESSHHHHHHHGGG-GS
T ss_pred HHHHHHHHhCCCc---CeECCC--CCCCcCCHHHHHHHhCc-cC
Confidence 4455666666662 699986 99999999999999875 54
No 215
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=37.91 E-value=15 Score=29.11 Aligned_cols=27 Identities=26% Similarity=0.524 Sum_probs=22.8
Q ss_pred cccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 553 WKYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 553 ~KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
-.|.|.+ |+|.|....-+..|+..-+.
T Consensus 17 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~ 43 (77)
T 2cot_A 17 RRYKCDE--CGKSFSHSSDLSKHRRTHTG 43 (77)
T ss_dssp CSSBCSS--SCCBCSCHHHHHHHHTTTCC
T ss_pred CCEECCC--CCcccCCHHHHHHHHHHcCC
Confidence 3689986 99999999999999986443
No 216
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}
Probab=37.28 E-value=15 Score=32.73 Aligned_cols=32 Identities=22% Similarity=0.317 Sum_probs=25.7
Q ss_pred cccccCCCCCcccccchhhHHHHHhhhChhHHHHHHH
Q 003865 553 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTS 589 (790)
Q Consensus 553 ~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E~Veev~~ 589 (790)
+...|. .|+|.||. +.+||.+.|.---++-++
T Consensus 20 d~iiCl--ecGK~fK~---LkRHL~~~hgltpeeYR~ 51 (87)
T 2jsp_A 20 DHIVCL--ECGGSFKS---LKRHLTTHHSMTPEEYRE 51 (87)
T ss_dssp SCEECT--BTCCEESB---HHHHHHHTTCSCHHHHHH
T ss_pred CceEec--ccchhhHH---HHHHHHHccCCCHHHHHH
Confidence 578997 49999996 889999999877665443
No 217
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=36.38 E-value=15 Score=29.07 Aligned_cols=26 Identities=12% Similarity=0.179 Sum_probs=22.6
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+ |+|.|....-+..|+..-+.
T Consensus 7 ~~~C~~--C~k~f~~~~~L~~H~~~h~~ 32 (78)
T 2d9h_A 7 GLQCEI--CGFTCRQKASLNWHQRKHAE 32 (78)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHHHHH
T ss_pred CeECCC--CCCeeCCHHHHHHHHHHhhc
Confidence 689996 99999999999999976443
No 218
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Probab=35.26 E-value=26 Score=29.82 Aligned_cols=23 Identities=22% Similarity=0.421 Sum_probs=20.9
Q ss_pred ccccCCCCCcccc-cchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLF-HAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLF-KgpEFVrKHI~n 578 (790)
.|.|.. |+|.| ....-+.+|+.+
T Consensus 34 ~~~C~~--C~k~F~~~~~~L~~H~~~ 57 (96)
T 2ctd_A 34 SVSCPT--CQAVGRKTIEGLKKHMEN 57 (96)
T ss_dssp CEECTT--TCSCEESSHHHHHHHHHH
T ss_pred CcCCCC--CCCCcccCHHHHHHHHHH
Confidence 689986 99999 999999999876
No 219
>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}
Probab=34.70 E-value=2.9 Score=27.92 Aligned_cols=22 Identities=36% Similarity=0.797 Sum_probs=18.7
Q ss_pred cccCCCCCcccccchhhHHHHHhh
Q 003865 555 YGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 555 wrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
|.|.. |+|.|.....+..|+..
T Consensus 3 ~~C~~--C~k~f~~~~~L~~H~~~ 24 (32)
T 2kfq_A 3 FACPA--CPKRFMRSDALSKHIKT 24 (32)
T ss_dssp SSSSS--SCTTHHHHHTTSSSTTS
T ss_pred CCCCC--CCcccCCHHHHHHHHHH
Confidence 68985 99999998888888765
No 220
>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5
Probab=33.19 E-value=30 Score=32.33 Aligned_cols=48 Identities=25% Similarity=0.357 Sum_probs=38.2
Q ss_pred cccccCCCCCcccccchhhHHHHHhhhChhHHHHHHHH----HHHHHHHhhhcc
Q 003865 553 WKYGCGAKGCTKLFHAAEFVHKHLKLKHPELVIELTSK----VREELYFQNYMN 602 (790)
Q Consensus 553 ~KwrC~l~gCtKLFKgpEFVrKHI~nKH~E~Veev~~K----v~E~~yFnNYl~ 602 (790)
.-..|-+ |.+.|...+-+.+|++.+|.==+.+++++ ....+-+.||+.
T Consensus 14 ~~~~CLF--Cd~~~~s~~~~l~H~k~~H~FD~~~i~~~~~LDfY~~IKLINyIR 65 (121)
T 1wir_A 14 QHTPCLF--CDRLFASAEETFSHCKLEHQFNIDSMVHKHGLEFYGYIKLINFIR 65 (121)
T ss_dssp CCEECSS--SCCEESSHHHHHHHHHHSSCCCHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CceeEec--CCCcccCHHHHHHHHHHhcCCCHHHHHHhcCCCceEEEEEEEeee
Confidence 4678975 99999999999999999998544455433 346688999998
No 221
>4i1l_A Scurfin, forkhead box protein P3; FOXP3, dimerization, complex ensemble, stability, regulatory activity, acetyation, DNA-binding, metal-binding; 2.10A {Mus musculus}
Probab=32.79 E-value=15 Score=33.28 Aligned_cols=26 Identities=35% Similarity=0.561 Sum_probs=20.6
Q ss_pred ccCCCCCcccccchhhHHHHHhhhCh
Q 003865 556 GCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 556 rC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|..+||.+.|....-..||+.+-|.
T Consensus 14 ~CkWPGCe~~~ed~~~FlkHL~~eH~ 39 (93)
T 4i1l_A 14 VCKWPGCEKVFEEPEEFLKHCQADHL 39 (93)
T ss_dssp ----CCSTTTTHHHHHHHHHHHHHHH
T ss_pred cccCCCCCCcccCHHHHHHHhhcccC
Confidence 69999999999999999999998885
No 222
>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4
Probab=32.47 E-value=17 Score=30.04 Aligned_cols=30 Identities=27% Similarity=0.329 Sum_probs=24.3
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh-ChhHHH
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK-HPELVI 585 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK-H~E~Ve 585 (790)
+-.|.+ |+++|-..-=|+-|||.| |-++|.
T Consensus 13 ~~eC~l--C~vkYs~r~slqDHIFs~qHI~~vk 43 (55)
T 2yrk_A 13 KPECTL--CGVKYSARLSIRDHIFSKQHISKVR 43 (55)
T ss_dssp CSCCTT--TTCCCCSSSCHHHHHTSHHHHHHHH
T ss_pred Cccccc--cCcccccccchhhhhccHHHHHHHH
Confidence 458997 999999999999999986 444443
No 223
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=30.79 E-value=44 Score=35.86 Aligned_cols=47 Identities=19% Similarity=0.133 Sum_probs=31.9
Q ss_pred CCCHHHHHHhccC-----------------CCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 003865 225 LMSYKQFIQELED-----------------DILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEW 272 (790)
Q Consensus 225 lmsFKQFl~~~~D-----------------dIspeEA~~rYqEYK~ef~~~Qi~~FFe~HKdEeW 272 (790)
-+=||||+..+.- .++-+||+..-..==..|.++|+. +|....+-.|
T Consensus 231 aIGykE~~~yl~g~~~~~~~~~~~~~~~~~~~~l~eaie~ik~~TR~yAKRQ~t-Wfr~~~~~~w 294 (339)
T 3a8t_A 231 AIGVPEFDRYFEKFRPGDVEGEDPGRDRVRRGAFEEAVRAIKENTCHLAKRQIG-KILRLKGAGW 294 (339)
T ss_dssp STTHHHHHHHHHHSCTTCCCCSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHTTSCC
T ss_pred HhhHHHHHHHHcCcccccccccccccchhhhcCHHHHHHHHHHHHHHHHHHHHH-HHccCCCCCC
Confidence 5779999877763 345566666655556678888876 5665555667
No 224
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A
Probab=29.49 E-value=16 Score=29.63 Aligned_cols=25 Identities=16% Similarity=0.611 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|....-+..|+..-+
T Consensus 3 ~~~C~~--C~k~f~~~~~L~~H~~~H~ 27 (88)
T 1llm_C 3 PFQCRI--CMRNFSRSDHLTTHIRTHT 27 (88)
T ss_dssp CEECTT--TCCEESCHHHHHHHHHHHH
T ss_pred CCcCCC--CCCccCCHHHHHHHHHHcC
Confidence 588986 9999999999999998633
No 225
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=28.47 E-value=19 Score=33.76 Aligned_cols=32 Identities=25% Similarity=0.475 Sum_probs=25.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhhh-ChhHHHHH
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLK-HPELVIEL 587 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nK-H~E~Veev 587 (790)
.|.|.. |+|.|....-+..|++.| |-..|..+
T Consensus 50 pfyC~~--C~K~F~~~~~L~~H~rsK~HKrrvk~l 82 (124)
T 1zr9_A 50 LHRCLA--CARYFIDSTNLKTHFRSKDHKKRLKQL 82 (124)
T ss_dssp CSEETT--TTEECSSHHHHHHHTTCHHHHHHHHHH
T ss_pred ceEccc--CcchhCCHHHHHHHHhhhhhhHHHHHh
Confidence 699986 999999999999999764 55555443
No 226
>2kw6_A Cyclin-dependent kinase 2-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=28.06 E-value=30 Score=29.54 Aligned_cols=25 Identities=32% Similarity=0.389 Sum_probs=20.0
Q ss_pred CCCchhHHHHHHHHHHHHHH--HHhhh
Q 003865 388 ISSEPRRIQVDIEQAQALVR--KLDSE 412 (790)
Q Consensus 388 i~S~peRI~kDLeQAr~LV~--kLDaE 412 (790)
..+..+||++||.+|+.||+ .++.|
T Consensus 34 sk~~~ERLkR~I~hAr~LVrECl~E~e 60 (65)
T 2kw6_A 34 SKSAMERLKRGIIHARGLVRECLAETE 60 (65)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34568999999999999998 44444
No 227
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=27.72 E-value=37 Score=31.24 Aligned_cols=28 Identities=21% Similarity=0.348 Sum_probs=19.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|.|.+..|+|.|....-+.+|+..-+.
T Consensus 104 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~ 131 (190)
T 1tf6_A 104 VYVCHFENCGKAFKKHNQLKVHQFSHTQ 131 (190)
T ss_dssp CCEECSSSSCEECSSHHHHHHHHGGGSS
T ss_pred eeeCCCCCCccccCCHHHHHHHHHHhCC
Confidence 5778434588888888888888776443
No 228
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=27.66 E-value=1.4e+02 Score=31.94 Aligned_cols=47 Identities=19% Similarity=0.409 Sum_probs=41.6
Q ss_pred CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 003865 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEW 272 (790)
Q Consensus 225 lmsFKQFl~~~~DdIspeEA~~rYqEYK~ef~~~Qi~~FFe~HKdEeW 272 (790)
-+=||||+..+.-.+|-+||+..-..=-..|.++|+. +|....+-.|
T Consensus 240 aIGYkE~~~yL~G~~sl~eaie~i~~~TR~yAKRQ~T-WfR~~~~~~w 286 (322)
T 3exa_A 240 AIGYKEMYDYLDGNVTLEEAIDTLKRNSRRYAKRQLT-WFRNKANVTW 286 (322)
T ss_dssp STTTHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHH-HHHTSTTEEE
T ss_pred eeeHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH-HhcCCCCCeE
Confidence 5779999999999999999998888778889999974 8888888889
No 229
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Probab=27.16 E-value=32 Score=31.63 Aligned_cols=39 Identities=26% Similarity=0.428 Sum_probs=27.1
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|..+++....+ ..|.|.+ |+|.|....-+.+|+..-+.
T Consensus 120 ~l~~H~~~h~~~---~~~~C~~--C~~~f~~~~~L~~H~~~H~~ 158 (190)
T 2i13_A 120 HLRAHQRTHTGE---KPYKCPE--CGKSFSREDNLHTHQRTHTG 158 (190)
T ss_dssp HHHHHHHHHHCC---CCEECTT--TCCEESCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCCC---CCeECCC--CCcccCCHHHHHHHHHhcCC
Confidence 344555554444 2688986 99999999999999876443
No 230
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=27.15 E-value=36 Score=25.71 Aligned_cols=26 Identities=27% Similarity=0.487 Sum_probs=22.2
Q ss_pred cccccCCCCCcccccchhhHHHHHhhhC
Q 003865 553 WKYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 553 ~KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
-|--|.+ |-|++..-.-+.|||+--|
T Consensus 8 ikqhcrf--ckkkysdvknlikhire~h 33 (37)
T 2elu_A 8 IKQHCRF--CKKKYSDVKNLIKHIRDAH 33 (37)
T ss_dssp CCCEETT--TTEECSSHHHHHHHHHHTT
T ss_pred HHHHHHH--HHHHHHHHHHHHHHHHHhc
Confidence 3557985 9999999999999998776
No 231
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=26.58 E-value=1.4e+02 Score=31.62 Aligned_cols=47 Identities=17% Similarity=0.234 Sum_probs=40.2
Q ss_pred CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 003865 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEW 272 (790)
Q Consensus 225 lmsFKQFl~~~~DdIspeEA~~rYqEYK~ef~~~Qi~~FFe~HKdEeW 272 (790)
-+=||||+..+.-.++-+||+..-..=-..|.++|+. +|....+-.|
T Consensus 254 aIGyke~~~yl~g~~~~~eai~~~~~~Tr~yAKRQ~T-Wfr~~~~~~w 300 (323)
T 3crm_A 254 AVGYRQVWDYLDGKLSYAEMTERGIIATRQLAKRQFT-WLRSWSHLHW 300 (323)
T ss_dssp STTHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHH-HHHTCSSCEE
T ss_pred eecHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH-HhCCCCCCeE
Confidence 5789999999999999999998877777788888875 6777777788
No 232
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=25.75 E-value=23 Score=27.37 Aligned_cols=22 Identities=27% Similarity=0.421 Sum_probs=14.4
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.. |+|.|. ..-+.+|+..
T Consensus 10 ~~~C~~--C~k~f~-~~~L~~H~~~ 31 (66)
T 2eod_A 10 TQPCTY--CTKEFV-FDTIQSHQYQ 31 (66)
T ss_dssp EEECSS--SCCEEE-HHHHHHHHHH
T ss_pred Ceeccc--cCCccC-HHHHHHHHHH
Confidence 366664 777777 6666777655
No 233
>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B
Probab=25.48 E-value=30 Score=25.23 Aligned_cols=21 Identities=19% Similarity=0.496 Sum_probs=19.1
Q ss_pred ccccCCCCCcccccchhhHHHHH
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHL 576 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI 576 (790)
-|.|.. |+|-|....-+.+|+
T Consensus 8 p~~C~~--CgK~F~~~s~L~~H~ 28 (36)
T 1fv5_A 8 RFMCLP--CGIAFSSPSTLEAHQ 28 (36)
T ss_dssp CCEETT--TTEECSCHHHHHHHH
T ss_pred CeECCC--CCCccCCHhHccCcC
Confidence 589985 999999999999997
No 234
>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Probab=25.33 E-value=63 Score=29.67 Aligned_cols=41 Identities=22% Similarity=0.378 Sum_probs=23.1
Q ss_pred hhhHHHHhhhhcccCcccccCCCCCcccccchhhHHHHHhhhCh
Q 003865 538 ALDPFVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVHKHLKLKHP 581 (790)
Q Consensus 538 ~ve~fVkk~~DEk~g~KwrC~l~gCtKLFKgpEFVrKHI~nKH~ 581 (790)
.|..+++....+ ..|.|....|+|.|....-+.+|+...|.
T Consensus 59 ~l~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~~h~ 99 (190)
T 1tf6_A 59 HLTRHSLTHTGE---KNFTCDSDGCDLRFTTKANMKKHFNRFHN 99 (190)
T ss_dssp HHHHHHTTTTTC---CCEECCSSSCCCEESCHHHHHHHHHTTSS
T ss_pred HHHHHHHHccCC---CceeCCCCCCCCccCCHHHHHHHHHHhcC
Confidence 344455443332 24666633477777777777777766663
No 235
>3iax_B Colicin-A; TOLB, TOLB BOX, complex, protein transport, trans antibiotic, antimicrobial, bacteriocin, cell membrane, MEMB transmembrane; 2.60A {Citrobacter freundii}
Probab=24.58 E-value=69 Score=29.32 Aligned_cols=30 Identities=37% Similarity=0.709 Sum_probs=18.6
Q ss_pred cccCCCCcccccCCCCCCCCCCCCCCCCCCCCCCC
Q 003865 163 GYDYTGGYEREMGGRPGYGDERPHGRFAGRSSGGY 197 (790)
Q Consensus 163 G~d~~gg~~~~~gg~~~y~~~~~~G~~~~r~~~g~ 197 (790)
||+||| .|-+.+|..++.-|..++-+++|+
T Consensus 3 gfnygg-----~gdgt~wsserg~gp~pggg~hGn 32 (115)
T 3iax_B 3 GFNYGG-----KGDGTGWSSERGSGPEPGGGSHGN 32 (115)
T ss_pred ccccCc-----ccCCCcccccCCCCCCCCCCCcCC
Confidence 555554 255667777777776666665444
No 236
>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}
Probab=24.30 E-value=32 Score=27.40 Aligned_cols=23 Identities=22% Similarity=0.488 Sum_probs=20.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
-|.|.. |+|.|....-+..|+..
T Consensus 4 py~C~~--C~k~F~~~~~L~~H~~~ 26 (60)
T 4gzn_C 4 PFFCNF--CGKTYRDASGLSRHRRA 26 (60)
T ss_dssp CEECTT--TCCEESSHHHHHHHHHH
T ss_pred CccCCC--CCCEeCCHHHHHHHHHH
Confidence 489986 99999999999999875
No 237
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=22.78 E-value=1.2e+02 Score=32.38 Aligned_cols=47 Identities=17% Similarity=0.444 Sum_probs=41.1
Q ss_pred CCCHHHHHHhccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc
Q 003865 225 LMSYKQFIQELEDDILPAEAERRYQEYKSEYISTQKRVFFDAHKDEEW 272 (790)
Q Consensus 225 lmsFKQFl~~~~DdIspeEA~~rYqEYK~ef~~~Qi~~FFe~HKdEeW 272 (790)
-+=||||+..+.-.++-+||+..-..==..|.++|+. +|....+-.|
T Consensus 246 aIGyke~~~yl~g~~~~~ea~~~~~~~Tr~yAKRQ~T-Wfr~~~~~~w 292 (340)
T 3d3q_A 246 AIGYKELVPVIKGNISMENAVEKLKQHSRQYAKRQLT-WFKNKMNVHW 292 (340)
T ss_dssp STTTTTHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHH-HHHHTCCCEE
T ss_pred hccHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH-HhCCCCCCee
Confidence 6779999999999999999999888888889999875 6777778889
No 238
>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.45 E-value=56 Score=25.07 Aligned_cols=34 Identities=21% Similarity=0.172 Sum_probs=25.3
Q ss_pred hhHHHHhhhhcccCcccccC-CCCCcccccchhhHHHHHhh
Q 003865 539 LDPFVRKIRDEKYGWKYGCG-AKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 539 ve~fVkk~~DEk~g~KwrC~-l~gCtKLFKgpEFVrKHI~n 578 (790)
|..+++. +.| -.|.|. . |+|.|....-+..|+.+
T Consensus 25 L~~H~~~-~~~---~p~~C~~~--C~k~f~~~~~L~~H~~~ 59 (66)
T 2eod_A 25 IQSHQYQ-CPR---LPVACPNQ--CGVGTVAREDLPGHLKD 59 (66)
T ss_dssp HHHHHHH-CSS---SEEECTTC--CSCCEEETTTHHHHHHT
T ss_pred HHHHHHH-cCC---cCccCCcc--cCcccccHHHHHHHHHh
Confidence 4445543 333 368998 6 99999999999999875
No 239
>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=22.20 E-value=37 Score=28.82 Aligned_cols=23 Identities=22% Similarity=0.612 Sum_probs=20.8
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|.....+..|+..
T Consensus 25 py~C~~--C~k~F~~~~~L~~H~~~ 47 (88)
T 1x6f_A 25 TYQCKH--CDSKLQSTAELTSHLNI 47 (88)
T ss_dssp CEECSS--SCCEESSHHHHHHHHHH
T ss_pred CCcCCC--CCCEeCCHHHHHHHHHH
Confidence 589986 99999999999999875
No 240
>2m1l_A Cyclin-dependent kinase 2-associated protein 2; structural genomics, northeast structural genomics consortiu PSI-biology; NMR {Homo sapiens}
Probab=21.19 E-value=47 Score=28.62 Aligned_cols=25 Identities=36% Similarity=0.414 Sum_probs=19.8
Q ss_pred CCCchhHHHHHHHHHHHHHH--HHhhh
Q 003865 388 ISSEPRRIQVDIEQAQALVR--KLDSE 412 (790)
Q Consensus 388 i~S~peRI~kDLeQAr~LV~--kLDaE 412 (790)
..+..+||++||-+|+.||+ .++.|
T Consensus 38 sks~~ERLkRgI~hAr~LVRECl~e~e 64 (69)
T 2m1l_A 38 SKSAMERLKRGIIHARALVRECLAETE 64 (69)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999999999998 44443
No 241
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Probab=21.08 E-value=40 Score=29.04 Aligned_cols=24 Identities=17% Similarity=0.527 Sum_probs=21.7
Q ss_pred ccccCCCCCcccccchhhHHHHHhhhC
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKLKH 580 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~nKH 580 (790)
.|.|.. |+|.|....-+..|+.. |
T Consensus 74 ~~~C~~--C~k~f~~~~~l~~H~~~-H 97 (129)
T 2wbt_A 74 QFVCPL--CLMPFSSSVSLKQHIRY-T 97 (129)
T ss_dssp SEECTT--TCCEESSHHHHHHHHHH-T
T ss_pred CeECCC--CCcccCCHhHHHHHHHH-C
Confidence 689996 99999999999999976 5
No 242
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.60 E-value=43 Score=28.15 Aligned_cols=23 Identities=17% Similarity=0.501 Sum_probs=21.1
Q ss_pred ccccCCCCCcccccchhhHHHHHhh
Q 003865 554 KYGCGAKGCTKLFHAAEFVHKHLKL 578 (790)
Q Consensus 554 KwrC~l~gCtKLFKgpEFVrKHI~n 578 (790)
.|.|.+ |+|.|....-+..|+..
T Consensus 19 ~~~C~~--C~k~f~~~~~L~~H~~~ 41 (115)
T 2dmi_A 19 KFRCKD--CSAAYDTLVELTVHMNE 41 (115)
T ss_dssp SEEBSS--SSCEESSHHHHHHHHHH
T ss_pred CEECCc--cCchhcCHHHHHHHHHH
Confidence 589986 99999999999999986
Done!