BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003868
(790 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 1083 bits (2802), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 512/800 (64%), Positives = 642/800 (80%), Gaps = 21/800 (2%)
Query: 2 MMKNADYIRTLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYC 61
M N D +R +ANRYA+ L+LC P + LAR+VH ++I+ GF+PR HI+NRLID+YC
Sbjct: 1 MQPNPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYC 60
Query: 62 KSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMI 121
KS +L YAR LFDEI +PD +ARTT+++ Y AS ++ LAR +F K P+ MRDTV YNAMI
Sbjct: 61 KSSELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMI 120
Query: 122 TAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGT 181
T +SHN++G++AI LF M+ + KPDNFTF SVL+ LAL+ ++EKQC+Q H +KSG
Sbjct: 121 TGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGA 180
Query: 182 GLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYL 241
G TSV NAL+SVY KC SSP SL+ +AR+VFDE+ E+DE SWTTMMTGYVKN Y
Sbjct: 181 GYITSVSNALVSVYSKCASSP-----SLLHSARKVFDEILEKDERSWTTMMTGYVKNGYF 235
Query: 242 DAAREFLDGMSENVG-VAWNALISGYVHREL---------KMLMLRIQLDEFTYTSVISA 291
D E L+GM +N+ VA+NA+ISGYV+R +M+ I+LDEFTY SVI A
Sbjct: 236 DLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRA 295
Query: 292 CANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERD 351
CA +GL +LGKQVHAY+LR E +FS +N+LV+LY+KCGK +EAR IF +MP +D
Sbjct: 296 CATAGLLQLGKQVHAYVLRRE-----DFSFHFDNSLVSLYYKCGKFDEARAIFEKMPAKD 350
Query: 352 LVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRL 411
LVSWNA+LS YVS+G I EAK +F+ M+E+N+LSW +MISGLA+NG+GEEGLKLFS M+
Sbjct: 351 LVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKR 410
Query: 412 EGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEA 471
EGF+PCDYAF+GAI SCA LGA NG+Q HAQL+ G+DSSLSAGNALITMYA+CGVVE
Sbjct: 411 EGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEE 470
Query: 472 ANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNH 531
A VF TMP +DSVSWNA+IAALGQHG+GA A+++YE+MLK+GI PDRIT LTVL+AC+H
Sbjct: 471 ARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSH 530
Query: 532 AGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWE 591
AGLV +GR+YF++M Y IPPG DHYAR IDLLCR+GKFS+A+ VI+SLPFKP+A IWE
Sbjct: 531 AGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRSGKFSDAESVIESLPFKPTAEIWE 590
Query: 592 ALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRG 651
ALL+GCR+HGN++LGI AA++LF L+P H GTY+LLSNM+A G+W++ ARVRKLMRDRG
Sbjct: 591 ALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLSNMHAATGQWEEVARVRKLMRDRG 650
Query: 652 VKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDME 711
VKKE CSWIE++ +VH FLVDDT+HPEA+AVY YL+ L EMR+LGYVPDT FVLHD+E
Sbjct: 651 VKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQDLGKEMRRLGYVPDTSFVLHDVE 710
Query: 712 SD-QKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVV 770
SD KE L+THSEK+AVAFGLMKLP G T+R+ KNLR CGDCHN F+F+S VV R+I++
Sbjct: 711 SDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNLRTCGDCHNFFRFLSWVVQRDIIL 770
Query: 771 RDGKRFHHFRDGKCSCGDYW 790
RD KRFHHFR+G+CSCG++W
Sbjct: 771 RDRKRFHHFRNGECSCGNFW 790
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 602 bits (1551), Expect = e-171, Method: Compositional matrix adjust.
Identities = 322/774 (41%), Positives = 477/774 (61%), Gaps = 37/774 (4%)
Query: 34 ARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSA 93
A+ VH +I SG +++N L+++Y K+ ++AR LFDE+P + T+++AYS
Sbjct: 33 AQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPLRTAFSWNTVLSAYSK 92
Query: 94 SDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFT 153
++ E F++ P RD+V + MI Y + H AI + DM ++ ++P FT T
Sbjct: 93 RGDMDSTCEFFDQLP--QRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLT 150
Query: 154 SVLSALALIVEEEKQCMQ----MHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSL 209
+VL+++A +CM+ +H +VK G SV N+L+++Y KC P +
Sbjct: 151 NVLASVA-----ATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC-GDPMM----- 199
Query: 210 MGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHR 269
A+ VFD M RD SW M+ +++ +D A + M+E V WN++ISG+ R
Sbjct: 200 ---AKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQR 256
Query: 270 --ELKML-----MLRIQL---DEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEF 319
+L+ L MLR L D FT SV+SACAN +GKQ+H++++ T +
Sbjct: 257 GYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGF----DI 312
Query: 320 SLPVNNALVTLYWKCGKVNEARDIFNQMPERDLV--SWNAILSAYVSAGLIDEAKSLFEA 377
S V NAL+++Y +CG V AR + Q +DL + A+L Y+ G +++AK++F +
Sbjct: 313 SGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVS 372
Query: 378 MRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENG 437
+++R++++WT MI G Q+G E + LF M G +P Y A ++ + L +L +G
Sbjct: 373 LKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHG 432
Query: 438 RQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMP-NVDSVSWNAMIAALGQ 496
+Q+H V SG S+S NALITMYA+ G + +A+ F+ + D+VSW +MI AL Q
Sbjct: 433 KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQ 492
Query: 497 HGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGED 556
HG+ A+EL+E ML EG+ PD IT++ V SAC HAGLV +GR+YF+ M I P
Sbjct: 493 HGHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLS 552
Query: 557 HYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQL 616
HYA +DL RAG EA++ I+ +P +P W +LL+ CR+H NIDLG AAE+L L
Sbjct: 553 HYACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLL 612
Query: 617 MPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTA 676
P ++G Y L+N+Y+ G+W++AA++RK M+D VKKE G SWIEV +KVHVF V+D
Sbjct: 613 EPENSGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGT 672
Query: 677 HPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLP 736
HPE +Y ++++ E++K+GYVPDT VLHD+E + KE L HSEKLA+AFGL+ P
Sbjct: 673 HPEKNEIYMTMKKIWDEIKKMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTP 732
Query: 737 GGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
T+R++KNLR+C DCH A KF+SK+VGREI+VRD RFHHF+DG CSC DYW
Sbjct: 733 DKTTLRIMKNLRVCNDCHTAIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 104/385 (27%), Positives = 182/385 (47%), Gaps = 44/385 (11%)
Query: 33 LARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPD--IVARTTLIAA 90
+ + +H+H++++GF ++N LI +Y + + AR L ++ D I T L+
Sbjct: 297 IGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG 356
Query: 91 YSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNF 150
Y ++ A+ +F LK RD V + AMI Y + + AI LFR M +P+++
Sbjct: 357 YIKLGDMNQAKNIF--VSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSY 414
Query: 151 TFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLM 210
T + + ++A + Q+H + VKSG SV NALI++Y K + +
Sbjct: 415 TLAA-MLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKAGN---------I 464
Query: 211 GAARRVFDEMP-ERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHR 269
+A R FD + ERD +SWT+M+ ++ + + A E +
Sbjct: 465 TSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFE-------------------- 504
Query: 270 ELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVT 329
MLM ++ D TY V SAC ++GL G+Q + +++ K P +L +V
Sbjct: 505 --TMLMEGLRPDHITYVGVFSACTHAGLVNQGRQ-YFDMMKDVDKIIP--TLSHYACMVD 559
Query: 330 LYWKCGKVNEARDIFNQMP-ERDLVSWNAILSAYVSAGLIDEAKSLFE---AMRERNLLS 385
L+ + G + EA++ +MP E D+V+W ++LSA ID K E + N +
Sbjct: 560 LFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGA 619
Query: 386 WTVMISGLAQNGYGEEGLKLFSQMR 410
++ + + + G EE K+ M+
Sbjct: 620 YSALANLYSACGKWEEAAKIRKSMK 644
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 574 bits (1480), Expect = e-163, Method: Compositional matrix adjust.
Identities = 296/739 (40%), Positives = 437/739 (59%), Gaps = 58/739 (7%)
Query: 54 NRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRD 113
N +I Y ++ + AR LFDE+P+ D+V+ +I Y + N+ ARE+F P RD
Sbjct: 99 NGMISGYLRNGEFELARKLFDEMPERDLVSWNVMIKGYVRNRNLGKARELFEIMP--ERD 156
Query: 114 TVFYNAMITAYSHNSNGHAAIELFRDM-RRDDVKPDNFTFTSVLSALALIVEEEKQCMQM 172
+N M++ Y+ N A +F M ++DV ++ ++LSA + E+ CM
Sbjct: 157 VCSWNTMLSGYAQNGCVDDARSVFDRMPEKNDV-----SWNALLSAYVQNSKMEEACM-- 209
Query: 173 HCTVVKSGTGLFTSVLN-ALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTM 231
LF S N AL+S C+ FV + ++ AR+ FD M RD +SW T+
Sbjct: 210 ----------LFKSRENWALVSW--NCLLGGFVKKKKIV-EARQFFDSMNVRDVVSWNTI 256
Query: 232 MTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISA 291
+TGY ++ +D AR+ D W A++SGY+ + ++E
Sbjct: 257 ITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRM--------VEE--------- 299
Query: 292 CANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERD 351
R PE + NA++ Y + ++ A+++F+ MP R+
Sbjct: 300 -----------------ARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRN 342
Query: 352 LVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRL 411
+ +WN +++ Y G I EAK+LF+ M +R+ +SW MI+G +Q+G+ E L+LF QM
Sbjct: 343 VSTWNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMER 402
Query: 412 EGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEA 471
EG + +F+ A+++CA + ALE G+QLH +LV GY++ GNAL+ MY +CG +E
Sbjct: 403 EGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEE 462
Query: 472 ANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNH 531
AN +F M D VSWN MIA +HG G A+ +E M +EG+ PD T + VLSAC+H
Sbjct: 463 ANDLFKEMAGKDIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSH 522
Query: 532 AGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWE 591
GLV +GR+YF TM YG+ P HYA +DLL RAG +A +++ ++PF+P A IW
Sbjct: 523 TGLVDKGRQYFYTMTQDYGVMPNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWG 582
Query: 592 ALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRG 651
LL R+HGN +L AA+++F + P ++G YVLLSN+YA+ GRW D ++R MRD+G
Sbjct: 583 TLLGASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKG 642
Query: 652 VKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDME 711
VKK PG SWIE+ NK H F V D HPE ++ +LE+L L M+K GYV T VLHD+E
Sbjct: 643 VKKVPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVE 702
Query: 712 SDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVR 771
++KE + HSE+LAVA+G+M++ G +RV+KNLR+C DCHNA K+M+++ GR I++R
Sbjct: 703 EEEKERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILR 762
Query: 772 DGKRFHHFRDGKCSCGDYW 790
D RFHHF+DG CSCGDYW
Sbjct: 763 DNNRFHHFKDGSCSCGDYW 781
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 120/474 (25%), Positives = 205/474 (43%), Gaps = 83/474 (17%)
Query: 222 ERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLD 281
+ D W ++ Y++ + A M V++N +ISGY+ R + + R D
Sbjct: 61 DSDIKEWNVAISSYMRTGRCNEALRVFKRMPRWSSVSYNGMISGYL-RNGEFELARKLFD 119
Query: 282 EFTYTSVIS-ACANSGLFR---LGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKV 337
E ++S G R LGK + + PE + N +++ Y + G V
Sbjct: 120 EMPERDLVSWNVMIKGYVRNRNLGKARELFEI------MPERDVCSWNTMLSGYAQNGCV 173
Query: 338 NEARDIFNQMPERDLVSWNAILSAYVSAGLID---------------------------- 369
++AR +F++MPE++ VSWNA+LSAYV ++
Sbjct: 174 DDARSVFDRMPEKNDVSWNALLSAYVQNSKMEEACMLFKSRENWALVSWNCLLGGFVKKK 233
Query: 370 ---EAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAIT 426
EA+ F++M R+++SW +I+G AQ+G +E +LF + ++ +G I
Sbjct: 234 KIVEARQFFDSMNVRDVVSWNTIITGYAQSGKIDEARQLFDESPVQDVFTWTAMVSGYIQ 293
Query: 427 SCAGLGALENGRQLHAQLVH----------SGYDS-----------------SLSAGNAL 459
+ +E R+L ++ +GY ++S N +
Sbjct: 294 N----RMVEEARELFDKMPERNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVSTWNTM 349
Query: 460 ITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDR 519
IT YA+CG + A +F+ MP D VSW AMIA Q G+ A+ L+ QM +EG +R
Sbjct: 350 ITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNR 409
Query: 520 ITFLTVLSACNHAGLVKEGRRYFETMHGPY---GIPPGEDHYARFIDLLCRAGKFSEAKD 576
+F + LS C ++ G++ +HG G G + + C+ G EA D
Sbjct: 410 SSFSSALSTCADVVALELGKQ----LHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 465
Query: 577 VIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQ--LMPHHAGTYVLLS 628
+ + K W ++AG HG ++ ++ E + + L P A +LS
Sbjct: 466 LFKEMAGKDIVS-WNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 62/145 (42%), Gaps = 35/145 (24%)
Query: 16 YASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDE 75
++S L C + + L + +H ++ G++ + N L+ +YCK + A LF E
Sbjct: 412 FSSALSTCA--DVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKE 469
Query: 76 IPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIE 135
+ DIV+ T+IA YS R F G A+
Sbjct: 470 MAGKDIVSWNTMIAGYS--------RHGF-------------------------GEVALR 496
Query: 136 LFRDMRRDDVKPDNFTFTSVLSALA 160
F M+R+ +KPD+ T +VLSA +
Sbjct: 497 FFESMKREGLKPDDATMVAVLSACS 521
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 517 bits (1332), Expect = e-145, Method: Compositional matrix adjust.
Identities = 284/796 (35%), Positives = 438/796 (55%), Gaps = 73/796 (9%)
Query: 13 ANRYASQLQLC---DPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYA 69
+N Y+ Q++ C RN S + +H ++I + P + N ++ Y YA
Sbjct: 3 SNYYSVQIKQCIGLGARN--QSRYVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYA 60
Query: 70 RTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSN 129
R +FD IPQP++ + L+ AYS + + F K P RD V +N +I YS +
Sbjct: 61 RRVFDRIPQPNLFSWNNLLLAYSKAGLISEMESTFEKLP--DRDGVTWNVLIEGYSLSGL 118
Query: 130 GHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCM--QMHCTVVKSGTGLFTSV 187
AA++ + M RD N T ++++ L L + Q+H V+K G + V
Sbjct: 119 VGAAVKAYNTMMRD--FSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLV 176
Query: 188 LNALISVY--VKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAR 245
+ L+ +Y V C+S A++VF + +R+ + + ++M G + ++ A
Sbjct: 177 GSPLLYMYANVGCISD-----------AKKVFYGLDDRNTVMYNSLMGGLLACGMIEDAL 225
Query: 246 EFLDGMSENVGVAWNALISGYVH-----------RELKMLMLRIQLDEFTYTSVISACAN 294
+ GM ++ V+W A+I G RE+K+ L+ +D++ + SV+ AC
Sbjct: 226 QLFRGMEKD-SVSWAAMIKGLAQNGLAKEAIECFREMKVQGLK--MDQYPFGSVLPACGG 282
Query: 295 SGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVS 354
G GKQ+HA ++RT + + V +AL+ +Y KC
Sbjct: 283 LGAINEGKQIHACIIRTNFQD----HIYVGSALIDMYCKCK------------------- 319
Query: 355 WNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGF 414
+ AK++F+ M+++N++SWT M+ G Q G EE +K+F M+ G
Sbjct: 320 ------------CLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGI 367
Query: 415 KPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANC 474
P Y AI++CA + +LE G Q H + + SG ++ N+L+T+Y +CG ++ +
Sbjct: 368 DPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTR 427
Query: 475 VFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGL 534
+FN M D+VSW AM++A Q G I+L+++M++ G+ PD +T V+SAC+ AGL
Sbjct: 428 LFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGL 487
Query: 535 VKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALL 594
V++G+RYF+ M YGI P HY+ IDL R+G+ EA I+ +PF P A W LL
Sbjct: 488 VEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLL 547
Query: 595 AGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKK 654
+ CR GN+++G AAE L +L PHH Y LLS++YA+ G+WD A++R+ MR++ VKK
Sbjct: 548 SACRNKGNLEIGKWAAESLIELDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKK 607
Query: 655 EPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQ 714
EPG SWI+ K+H F DD + P +Y LE+L ++ GY PDT FV HD+E
Sbjct: 608 EPGQSWIKWKGKLHSFSADDESSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAV 667
Query: 715 KEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGK 774
K L+ HSE+LA+AFGL+ +P G +RV KNLR+C DCHNA K +S V GREI+VRD
Sbjct: 668 KVKMLNYHSERLAIAFGLIFVPSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAV 727
Query: 775 RFHHFRDGKCSCGDYW 790
RFH F+DG CSCGD+W
Sbjct: 728 RFHRFKDGTCSCGDFW 743
>sp|Q9M2Y7|PP274_ARATH Pentatricopeptide repeat-containing protein At3g49710
OS=Arabidopsis thaliana GN=PCMP-H79 PE=2 SV=1
Length = 721
Score = 496 bits (1276), Expect = e-139, Method: Compositional matrix adjust.
Identities = 282/763 (36%), Positives = 422/763 (55%), Gaps = 74/763 (9%)
Query: 34 ARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSA 93
+S+HA + S ++ N +++Y K +L YAR F +P++ + ++ AY+
Sbjct: 27 GKSLHALYVKSIVASSTYLSNHFVNLYSKCGRLSYARAAFYSTEEPNVFSYNVIVKAYAK 86
Query: 94 SDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFT 153
+ +AR++F++ P DTV YN +I+ Y+ AA+ LF+ MR+ + D FT +
Sbjct: 87 DSKIHIARQLFDEIP--QPDTVSYNTLISGYADARETFAAMVLFKRMRKLGFEVDGFTLS 144
Query: 154 SVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAA 213
+++A V+ KQ +HC V G ++SV NA ++ Y S L+ A
Sbjct: 145 GLIAACCDRVDLIKQ---LHCFSVSGGFDSYSSVNNAFVTYY---------SKGGLLREA 192
Query: 214 RRVFDEMPE-RDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELK 272
VF M E RDE+SW +M+ Y + + A+ +++E
Sbjct: 193 VSVFYGMDELRDEVSWNSMIVAY--GQHKEGAKALA------------------LYKE-- 230
Query: 273 MLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYW 332
M+ ++D FT SV++A + G+Q H L++ V + L+ Y
Sbjct: 231 MIFKGFKIDMFTLASVLNALTSLDHLIGGRQFHGKLIKAGFHQNSH----VGSGLIDFYS 286
Query: 333 KCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISG 392
KCG + G+ D K +F+ + +L+ W MISG
Sbjct: 287 KCGGCD---------------------------GMYDSEK-VFQEILSPDLVVWNTMISG 318
Query: 393 LAQNG-YGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDS 451
+ N EE +K F QM+ G +P D +F ++C+ L + +Q+H + S S
Sbjct: 319 YSMNEELSEEAVKSFRQMQRIGHRPDDCSFVCVTSACSNLSSPSQCKQIHGLAIKSHIPS 378
Query: 452 S-LSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQM 510
+ +S NALI++Y + G ++ A VF+ MP +++VS+N MI QHG+G A+ LY++M
Sbjct: 379 NRISVNNALISLYYKSGNLQDARWVFDRMPELNAVSFNCMIKGYAQHGHGTEALLLYQRM 438
Query: 511 LKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGK 570
L GI P++ITF+ VLSAC H G V EG+ YF TM + I P +HY+ IDLL RAGK
Sbjct: 439 LDSGIAPNKITFVAVLSACAHCGKVDEGQEYFNTMKETFKIEPEAEHYSCMIDLLGRAGK 498
Query: 571 FSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNM 630
EA+ ID++P+KP + W ALL CR H N+ L +AA +L + P A YV+L+NM
Sbjct: 499 LEEAERFIDAMPYKPGSVAWAALLGACRKHKNMALAERAANELMVMQPLAATPYVMLANM 558
Query: 631 YANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQL 690
YA+ +W++ A VRK MR + ++K+PGCSWIEV K HVF+ +D +HP + V +YLE++
Sbjct: 559 YADARKWEEMASVRKSMRGKRIRKKPGCSWIEVKKKKHVFVAEDWSHPMIREVNEYLEEM 618
Query: 691 VLEMRKLGYVPDTKFVL---HDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNL 747
+ +M+K+GYV D K+ + + +E L HSEKLAVAFGLM G + V+KNL
Sbjct: 619 MKKMKKVGYVMDKKWAMVKEDEAGEGDEEMRLGHHSEKLAVAFGLMSTRDGEELVVVKNL 678
Query: 748 RICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
RICGDCHNA KFMS V GREI+VRD RFH F+DGKCSCGDYW
Sbjct: 679 RICGDCHNAIKFMSAVAGREIIVRDNLRFHCFKDGKCSCGDYW 721
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 98/336 (29%), Positives = 164/336 (48%), Gaps = 21/336 (6%)
Query: 288 VISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQM 347
++ + A LF GK +HA +++ + S N V LY KCG+++ AR F
Sbjct: 15 LLKSVAERDLF-TGKSLHALYVKSIVASSTYLS----NHFVNLYSKCGRLSYARAAFYST 69
Query: 348 PERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFS 407
E ++ S+N I+ AY I A+ LF+ + + + +S+ +ISG A + LF
Sbjct: 70 EEPNVFSYNVIVKAYAKDSKIHIARQLFDEIPQPDTVSYNTLISGYADARETFAAMVLFK 129
Query: 408 QMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCG 467
+MR GF+ + +G I +C ++ +QLH V G+DS S NA +T Y++ G
Sbjct: 130 RMRKLGFEVDGFTLSGLIAACC--DRVDLIKQLHCFSVSGGFDSYSSVNNAFVTYYSKGG 187
Query: 468 VVEAANCVFNTMPNV-DSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVL 526
++ A VF M + D VSWN+MI A GQH GA+A+ LY++M+ +G D T +VL
Sbjct: 188 LLREAVSVFYGMDELRDEVSWNSMIVAYGQHKEGAKALALYKEMIFKGFKIDMFTLASVL 247
Query: 527 SACNHAGLVKEGRRYFETMHGPY---GIPPGEDHYARFIDLLCRAG---KFSEAKDVIDS 580
+A + GR++ HG G + ID + G +++ V
Sbjct: 248 NALTSLDHLIGGRQF----HGKLIKAGFHQNSHVGSGLIDFYSKCGGCDGMYDSEKVFQE 303
Query: 581 LPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQL 616
+ P +W +++G + N +L +A + Q+
Sbjct: 304 I-LSPDLVVWNTMISGYSM--NEELSEEAVKSFRQM 336
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 491 bits (1265), Expect = e-138, Method: Compositional matrix adjust.
Identities = 263/733 (35%), Positives = 406/733 (55%), Gaps = 65/733 (8%)
Query: 80 DIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRD 139
++ L+A YS ++ AR++F++ + + D V +N++I +Y+ A+E+F
Sbjct: 161 NVFVGNALVAMYSRCRSLSDARKVFDE--MSVWDVVSWNSIIESYAKLGKPKVALEMFSR 218
Query: 140 MRRD-DVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKC 198
M + +PDN T +VL A + Q+HC V S V N L+ +Y KC
Sbjct: 219 MTNEFGCRPDNITLVNVLPPCASLGTHSLG-KQLHCFAVTSEMIQNMFVGNCLVDMYAKC 277
Query: 199 VSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVK-NDYLDAAREFLDGMSENVG- 256
+M A VF M +D +SW M+ GY + + DA R F E +
Sbjct: 278 ---------GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQEEKIKM 328
Query: 257 --VAWNALISGYVHREL---------KMLMLRIQLDEFTYTSVISACANSGLFRLGKQVH 305
V W+A ISGY R L +ML I+ +E T SV+S CA+ G GK++H
Sbjct: 329 DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIH 388
Query: 306 AYLLRTEAKPTPEFSLPVN---NALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAY 362
Y ++ N N L+ +Y KC KV
Sbjct: 389 CYAIKYPIDLRKNGHGDENMVINQLIDMYAKCKKV------------------------- 423
Query: 363 VSAGLIDEAKSLFEAM--RERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGF--KPCD 418
D A+++F+++ +ER++++WTVMI G +Q+G + L+L S+M E +P
Sbjct: 424 ------DTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNA 477
Query: 419 YAFAGAITSCAGLGALENGRQLHAQLVHSGYDS-SLSAGNALITMYARCGVVEAANCVFN 477
+ + A+ +CA L AL G+Q+HA + + ++ L N LI MYA+CG + A VF+
Sbjct: 478 FTISCALVACASLAALRIGKQIHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFD 537
Query: 478 TMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKE 537
M + V+W +++ G HG G A+ ++++M + G D +T L VL AC+H+G++ +
Sbjct: 538 NMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQ 597
Query: 538 GRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGC 597
G YF M +G+ PG +HYA +DLL RAG+ + A +I+ +P +P +W A L+ C
Sbjct: 598 GMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCC 657
Query: 598 RIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPG 657
RIHG ++LG AAE++ +L +H G+Y LLSN+YAN GRW D R+R LMR +GVKK PG
Sbjct: 658 RIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVKKRPG 717
Query: 658 CSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEY 717
CSW+E F V D HP A+ +Y+ L + ++ +GYVP+T F LHD++ ++K+
Sbjct: 718 CSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRIKDIGYVPETGFALHDVDDEEKDD 777
Query: 718 ALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFH 777
L HSEKLA+A+G++ P GA +R+ KNLR+CGDCH AF +MS+++ +I++RD RFH
Sbjct: 778 LLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCHTAFTYMSRIIDHDIILRDSSRFH 837
Query: 778 HFRDGKCSCGDYW 790
HF++G CSC YW
Sbjct: 838 HFKNGSCSCKGYW 850
Score = 215 bits (547), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 159/566 (28%), Positives = 264/566 (46%), Gaps = 70/566 (12%)
Query: 61 CKSL---KLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFY 117
CK++ KL++ + L I ++ + LI+ Y + + A + + P +
Sbjct: 38 CKTISQVKLIHQKLLSFGILTLNLTSH--LISTYISVGCLSHAVSLLRRFPPSDAGVYHW 95
Query: 118 NAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVV 177
N++I +Y N + + LF M PDN+TF V A I +C + +
Sbjct: 96 NSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEI--SSVRCGE-SAHAL 152
Query: 178 KSGTGLFTSVL--NALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGY 235
TG ++V NAL+++Y +C S + AR+VFDEM D +SW +++ Y
Sbjct: 153 SLVTGFISNVFVGNALVAMYSRCRS---------LSDARKVFDEMSVWDVVSWNSIIESY 203
Query: 236 VKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANS 295
K A E M+ G + D T +V+ CA+
Sbjct: 204 AKLGKPKVALEMFSRMTNEFGC---------------------RPDNITLVNVLPPCASL 242
Query: 296 GLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSW 355
G LGKQ+H + + +E ++ V N LV +Y KCG ++EA +F+ M +D+VSW
Sbjct: 243 GTHSLGKQLHCFAVTSEMIQ----NMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSW 298
Query: 356 NAILSAYVSAGLIDEAKSLFEAMRER----NLLSWTVMISGLAQNGYGEEGLKLFSQMRL 411
NA+++ Y G ++A LFE M+E ++++W+ ISG AQ G G E L + QM
Sbjct: 299 NAMVAGYSQIGRFEDAVRLFEKMQEEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLS 358
Query: 412 EGFKPCDYAFAGAITSCAGLGALENGRQLHA-------QLVHSGYDSSLSAGNALITMYA 464
G KP + ++ CA +GAL +G+++H L +G+ N LI MYA
Sbjct: 359 SGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYA 418
Query: 465 RCGVVEAANCVFNTMP--NVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGIL--PDRI 520
+C V+ A +F+++ D V+W MI QHG+ +A+EL +M +E P+
Sbjct: 419 KCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEEDCQTRPNAF 478
Query: 521 TFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARF-----IDLLCRAGKFSEAK 575
T L AC ++ G++ +H Y + ++ F ID+ + G S+A+
Sbjct: 479 TISCALVACASLAALRIGKQ----IHA-YALRNQQNAVPLFVSNCLIDMYAKCGSISDAR 533
Query: 576 DVIDSLPFKPSAPIWEALLAGCRIHG 601
V D++ K W +L+ G +HG
Sbjct: 534 LVFDNMMAKNEV-TWTSLMTGYGMHG 558
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 111/397 (27%), Positives = 192/397 (48%), Gaps = 50/397 (12%)
Query: 30 TSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIA 89
T SL + +H ++S + N L+D+Y K + A T+F + D+V+ ++A
Sbjct: 244 THSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKCGMMDEANTVFSNMSVKDVVSWNAMVA 303
Query: 90 AYSASDNVKLAREMFNKT---PLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVK 146
YS + A +F K +KM D V ++A I+ Y+ G+ A+ + R M +K
Sbjct: 304 GYSQIGRFEDAVRLFEKMQEEKIKM-DVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIK 362
Query: 147 PDNFTFTSVLSALALIVEEEKQCMQMHCTVV-------KSGTGLFTSVLNALISVYVKCV 199
P+ T SVLS A V ++HC + K+G G V+N LI +Y KC
Sbjct: 363 PNEVTLISVLSGCA-SVGALMHGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK 421
Query: 200 SSPFVSSRSLMGAARRVFDEMP--ERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGV 257
+ AR +FD + ERD ++WT M+ GY ++ + A E L M E
Sbjct: 422 K---------VDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEMFEED-- 470
Query: 258 AWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTP 317
+ + + FT + + ACA+ R+GKQ+HAY LR + P
Sbjct: 471 ------------------CQTRPNAFTISCALVACASLAALRIGKQIHAYALRNQQNAVP 512
Query: 318 EFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEA 377
F V+N L+ +Y KCG +++AR +F+ M ++ V+W ++++ Y G +EA +F+
Sbjct: 513 LF---VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDE 569
Query: 378 MRERNL----LSWTVMISGLAQNGYGEEGLKLFSQMR 410
MR ++ V++ + +G ++G++ F++M+
Sbjct: 570 MRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMK 606
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/332 (24%), Positives = 143/332 (43%), Gaps = 48/332 (14%)
Query: 333 KCGKVNEARDIFNQMPERDLVSWNA---ILSAYVSAGLIDEAKSLFEAM--RERNLLSWT 387
KC +++ + I ++ +++ N ++S Y+S G + A SL + + W
Sbjct: 37 KCKTISQVKLIHQKLLSFGILTLNLTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWN 96
Query: 388 VMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHS 447
+I NG + L LF M + P +Y F +C + ++ G HA + +
Sbjct: 97 SLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVT 156
Query: 448 GYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELY 507
G+ S++ GNAL+ MY+RC + A VF+ M D VSWN++I + + G A+E++
Sbjct: 157 GFISNVFVGNALVAMYSRCRSLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMF 216
Query: 508 EQMLKE-GILPDRITFLTVLSACNHAGLVKEGRR---YFETMHGPYGIPPGEDHYARFID 563
+M E G PD IT + VL C G G++ + T + G +D
Sbjct: 217 SRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGN----CLVD 272
Query: 564 LLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGT 623
+ + G EA V ++ K W A++AG
Sbjct: 273 MYAKCGMMDEANTVFSNMSVKDVVS-WNAMVAG--------------------------- 304
Query: 624 YVLLSNMYANLGRWDDAARVRKLMRDRGVKKE 655
Y+ +GR++DA R+ + M++ +K +
Sbjct: 305 -------YSQIGRFEDAVRLFEKMQEEKIKMD 329
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 110/408 (26%), Positives = 176/408 (43%), Gaps = 69/408 (16%)
Query: 34 ARSVHAHMISSGFKPREHIINRLI-------------DIYCKSLKLVYARTLFDEIPQPD 80
A V M+SSG KP E + ++ +I+C ++K Y L +
Sbjct: 349 ALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIK--YPIDLRKNGHGDE 406
Query: 81 IVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDM 140
+ LI Y+ V AR MF+ K RD V + MI YS + + + A+EL +M
Sbjct: 407 NMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDANKALELLSEM 466
Query: 141 RRDD--VKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVK---SGTGLFTSVLNALISVY 195
+D +P+ FT + L A A + + Q+H ++ + LF S N LI +Y
Sbjct: 467 FEEDCQTRPNAFTISCALVACASLA-ALRIGKQIHAYALRNQQNAVPLFVS--NCLIDMY 523
Query: 196 VKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENV 255
KC S + AR VFD M ++E++WT++MTGY + Y + A D
Sbjct: 524 AKCGS---------ISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFD------ 568
Query: 256 GVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEA-- 313
+M + +LD T V+ AC++SG+ G + Y R +
Sbjct: 569 ----------------EMRRIGFKLDGVTLLVVLYACSHSGMIDQGME---YFNRMKTVF 609
Query: 314 --KPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMP-ERDLVSWNAILSAYVSAGLIDE 370
P PE LV L + G++N A + +MP E V W A LS G ++
Sbjct: 610 GVSPGPEHY----ACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHGKVEL 665
Query: 371 AKSLFEAMRE---RNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFK 415
+ E + E + S+T++ + A G ++ ++ S MR +G K
Sbjct: 666 GEYAAEKITELASNHDGSYTLLSNLYANAGRWKDVTRIRSLMRHKGVK 713
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 487 bits (1254), Expect = e-136, Method: Compositional matrix adjust.
Identities = 267/771 (34%), Positives = 414/771 (53%), Gaps = 66/771 (8%)
Query: 38 HAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNV 97
HA ++ SG + +I +LI Y A + IP P I + ++LI A + +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALTKAKLF 97
Query: 98 KLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLS 157
+ +F++ +F + +I SH V P+ F + LS
Sbjct: 98 TQSIGVFSR--------MFSHGLIPD-SH------------------VLPNLFKVCAELS 130
Query: 158 ALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVF 217
A K Q+HC SG + V ++ +Y++C MG AR+VF
Sbjct: 131 AF-------KVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRC---------GRMGDARKVF 174
Query: 218 DEMPERDELSWTTMMTGYVKNDYLDAAREFLD-----GMSENVGVAWNALISGY----VH 268
D M ++D ++ + ++ Y + L+ L G+ N+ V+WN ++SG+ H
Sbjct: 175 DRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESSGIEANI-VSWNGILSGFNRSGYH 233
Query: 269 RELKMLMLRIQ-----LDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPV 323
+E ++ +I D+ T +SV+ + +S + +G+ +H Y+++ V
Sbjct: 234 KEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDK----CV 289
Query: 324 NNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRER-- 381
+A++ +Y K G V +FNQ + NA ++ GL+D+A +FE +E+
Sbjct: 290 ISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTM 349
Query: 382 --NLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQ 439
N++SWT +I+G AQNG E L+LF +M++ G KP + +C + AL +GR
Sbjct: 350 ELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRS 409
Query: 440 LHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGN 499
H V ++ G+ALI MYA+CG + + VFN MP + V WN+++ HG
Sbjct: 410 THGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGK 469
Query: 500 GARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYA 559
+ ++E +++ + PD I+F ++LSAC GL EG +YF+ M YGI P +HY+
Sbjct: 470 AKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYS 529
Query: 560 RFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPH 619
++LL RAGK EA D+I +PF+P + +W ALL CR+ N+DL AAE+LF L P
Sbjct: 530 CMVNLLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPE 589
Query: 620 HAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPE 679
+ GTYVLLSN+YA G W + +R M G+KK PGCSWI+V N+V+ L D +HP+
Sbjct: 590 NPGTYVLLSNIYAAKGMWTEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQ 649
Query: 680 AQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGA 739
+ + ++++ EMRK G+ P+ F LHD+E ++E L HSEKLAV FGL+ P G
Sbjct: 650 IDQITEKMDEISKEMRKSGHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGT 709
Query: 740 TVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
++V+KNLRICGDCH KF+S GREI +RD RFHHF+DG CSCGD+W
Sbjct: 710 PLQVIKNLRICGDCHAVIKFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 192/411 (46%), Gaps = 48/411 (11%)
Query: 33 LARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYS 92
+ + +H SG + + +Y + ++ AR +FD + D+V + L+ AY+
Sbjct: 134 VGKQIHCVSCVSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYA 193
Query: 93 ----ASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPD 148
+ V++ EM ++ + V +N +++ ++ + A+ +F+ + PD
Sbjct: 194 RKGCLEEVVRILSEM--ESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPD 251
Query: 149 NFTFTSVLSALALIVEEEKQCMQM----HCTVVKSGTGLFTSVLNALISVYVKCVSSPFV 204
T +SVL ++ + + + M H V+K G V++A+I +Y K
Sbjct: 252 QVTVSSVLPSVG-----DSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGK------- 299
Query: 205 SSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSE-----NVGVAW 259
S + G +F++ + +TG +N +D A E + E NV V+W
Sbjct: 300 -SGHVYGII-SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNV-VSW 356
Query: 260 NALISGYVHR-------EL--KMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLR 310
++I+G EL +M + ++ + T S++ AC N G+ H + +R
Sbjct: 357 TSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVR 416
Query: 311 TEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDE 370
++ V +AL+ +Y KCG++N ++ +FN MP ++LV WN++++ + G E
Sbjct: 417 VHLLD----NVHVGSALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKE 472
Query: 371 AKSLFEA-MRER---NLLSWTVMISGLAQNGYGEEGLKLFSQMRLE-GFKP 416
S+FE+ MR R + +S+T ++S Q G +EG K F M E G KP
Sbjct: 473 VMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKP 523
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 148/333 (44%), Gaps = 38/333 (11%)
Query: 32 SLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAY 91
++ R +H ++I G + +I+ +ID+Y KS + +LF++ + I
Sbjct: 269 NMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGL 328
Query: 92 SASDNVKLAREMFN--KTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDN 149
S + V A EMF K + V + ++I + N A+ELFR+M+ VKP++
Sbjct: 329 SRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNH 388
Query: 150 FTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSL 209
T S+L A I H V+ V +ALI +Y KC
Sbjct: 389 VTIPSMLPACGNIA-ALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC---------GR 438
Query: 210 MGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHR 269
+ ++ VF+ MP ++ + W ++M G+ + G ++ V + +L
Sbjct: 439 INLSQIVFNMMPTKNLVCWNSLMNGFS-----------MHGKAKEVMSIFESL------- 480
Query: 270 ELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVT 329
+ R++ D ++TS++SAC GL G + + ++ E P L + +V
Sbjct: 481 ----MRTRLKPDFISFTSLLSACGQVGLTDEGWK-YFKMMSEEYGIKPR--LEHYSCMVN 533
Query: 330 LYWKCGKVNEARDIFNQMP-ERDLVSWNAILSA 361
L + GK+ EA D+ +MP E D W A+L++
Sbjct: 534 LLGRAGKLQEAYDLIKEMPFEPDSCVWGALLNS 566
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 485 bits (1249), Expect = e-136, Method: Compositional matrix adjust.
Identities = 273/783 (34%), Positives = 414/783 (52%), Gaps = 113/783 (14%)
Query: 80 DIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRD 139
D+ T+L+ Y N K R++F++ +K R+ V + +I+ Y+ NS + LF
Sbjct: 127 DVSVGTSLVDTYMKGSNFKDGRKVFDE--MKERNVVTWTTLISGYARNSMNDEVLTLFMR 184
Query: 140 MRRDDVKPDNFTFTSVLSALALIVEEEK---QCMQMHCTVVKSGTGLFTSVLNALISVYV 196
M+ + +P++FTF + L LA EE + +Q+H VVK+G V N+LI++Y+
Sbjct: 185 MQNEGTQPNSFTFAAALGVLA----EEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYL 240
Query: 197 KCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVG 256
KC + + AR +FD+ + ++W +M++GY N G
Sbjct: 241 KCGN---------VRKARILFDKTEVKSVVTWNSMISGYAAN-----------------G 274
Query: 257 VAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPT 316
+ AL Y M + ++L E ++ SVI CAN R +Q+H ++ K
Sbjct: 275 LDLEALGMFY-----SMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVV----KYG 325
Query: 317 PEFSLPVNNALVTLYWKC----------------GKV----------------NEARDIF 344
F + AL+ Y KC G V EA D+F
Sbjct: 326 FLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLF 385
Query: 345 NQMP-----------------------------------ERDLVSWNAILSAYVSAGLID 369
++M ER A+L AYV G ++
Sbjct: 386 SEMKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVGTALLDAYVKLGKVE 445
Query: 370 EAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCA 429
EA +F + ++++++W+ M++G AQ G E +K+F ++ G KP ++ F+ + CA
Sbjct: 446 EAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCA 505
Query: 430 GLGA-LENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWN 488
A + G+Q H + S DSSL +AL+TMYA+ G +E+A VF D VSWN
Sbjct: 506 ATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWN 565
Query: 489 AMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGP 548
+MI+ QHG +A++++++M K + D +TF+ V +AC HAGLV+EG +YF+ M
Sbjct: 566 SMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRD 625
Query: 549 YGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQ 608
I P ++H + +DL RAG+ +A VI+++P + IW +LA CR+H +LG
Sbjct: 626 CKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRL 685
Query: 609 AAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVH 668
AAE++ + P + YVLLSNMYA G W + A+VRKLM +R VKKEPG SWIEV NK +
Sbjct: 686 AAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTY 745
Query: 669 VFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAV 728
FL D +HP +Y LE L ++ LGY PDT +VL D++ + KE L+ HSE+LA+
Sbjct: 746 SFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAI 805
Query: 729 AFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHF-RDGKCSCG 787
AFGL+ P G+ + ++KNLR+CGDCH K ++K+ REIVVRD RFHHF DG CSCG
Sbjct: 806 AFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCG 865
Query: 788 DYW 790
D+W
Sbjct: 866 DFW 868
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 133/531 (25%), Positives = 224/531 (42%), Gaps = 108/531 (20%)
Query: 100 AREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSAL 159
A +F+K+P + R++ Y +++ +S + A LF ++ R ++ D F+SVL
Sbjct: 46 AHNLFDKSPGRDRES--YISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVS 103
Query: 160 ALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDE 219
A + +E Q+HC +K G F+ S+
Sbjct: 104 ATLCDELFG-RQLHCQCIKFG----------------------FLDDVSV---------- 130
Query: 220 MPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGY----VHRELKMLM 275
T+++ Y+K R+ D M E V W LISGY ++ E+ L
Sbjct: 131 --------GTSLVDTYMKGSNFKDGRKVFDEMKERNVVTWTTLISGYARNSMNDEVLTLF 182
Query: 276 LRIQ-----LDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTL 330
+R+Q + FT+ + + A G+ G QVH +++ T +PV+N+L+ L
Sbjct: 183 MRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNGLDKT----IPVSNSLINL 238
Query: 331 YWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMI 390
Y KCG V +AR +F++ + +V+WN+++S Y + GL EA
Sbjct: 239 YLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEA------------------- 279
Query: 391 SGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYD 450
L +F MRL + + +FA I CA L L QLH +V G+
Sbjct: 280 ------------LGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFL 327
Query: 451 SSLSAGNALITMYARCGVVEAANCVFNTMPNV-DSVSWNAMIAALGQHGNGARAIELYEQ 509
+ AL+ Y++C + A +F + V + VSW AMI+ Q+ A++L+ +
Sbjct: 328 FDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSE 387
Query: 510 MLKEGILPDRITFLTVLSACN-------HAGLVKEGRRYFETMHGPYGIPPGEDHYARFI 562
M ++G+ P+ T+ +L+A HA +VK T+ +
Sbjct: 388 MKRKGVRPNEFTYSVILTALPVISPSEVHAQVVKTNYERSSTVG------------TALL 435
Query: 563 DLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQL 613
D + GK EA V + K W A+LAG G + I+ +L
Sbjct: 436 DAYVKLGKVEEAAKVFSGIDDKDIVA-WSAMLAGYAQTGETEAAIKMFGEL 485
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 122/534 (22%), Positives = 220/534 (41%), Gaps = 145/534 (27%)
Query: 37 VHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSAS-- 94
VH ++ +G + N LI++Y K + AR LFD+ +V ++I+ Y+A+
Sbjct: 216 VHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGYAANGL 275
Query: 95 -------------DNVKLAREMF--------NKTPLK--------------MRDTVFYNA 119
+ V+L+ F N L+ + D A
Sbjct: 276 DLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQLHCSVVKYGFLFDQNIRTA 335
Query: 120 MITAYSHNSNGHAAIELFR--------------------------------DMRRDDVKP 147
++ AYS + A+ LF+ +M+R V+P
Sbjct: 336 LMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQNDGKEEAVDLFSEMKRKGVRP 395
Query: 148 DNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSR 207
+ FT++ +L+AL +I E +H VVK+ ++V AL+ YVK
Sbjct: 396 NEFTYSVILTALPVISPSE-----VHAQVVKTNYERSSTVGTALLDAYVKL--------- 441
Query: 208 SLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYV 267
+ A +VF + ++D ++W+ M+ GY + +AA + +++
Sbjct: 442 GKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKG------------- 488
Query: 268 HRELKMLMLRIQLDEFTYTSVISACA--NSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNN 325
I+ +EFT++S+++ CA N+ + + GKQ H + +++ + SL V++
Sbjct: 489 ---------GIKPNEFTFSSILNVCAATNASMGQ-GKQFHGFAIKSRL----DSSLCVSS 534
Query: 326 ALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLS 385
AL+T+Y K G + A ++F + E+DLVSWN+++S Y
Sbjct: 535 ALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGY----------------------- 571
Query: 386 WTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLV 445
AQ+G + L +F +M+ K F G +C G +E G + +V
Sbjct: 572 --------AQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMV 623
Query: 446 HSGYDSSLSAGNA-LITMYARCGVVEAANCVFNTMPN-VDSVSWNAMIAALGQH 497
+ N+ ++ +Y+R G +E A V MPN S W ++AA H
Sbjct: 624 RDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVH 677
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 107/243 (44%), Gaps = 3/243 (1%)
Query: 363 VSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFA 422
VS+ + A +LF+ R+ S+ ++ G +++G +E +LF + G + F+
Sbjct: 38 VSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIHRLGMEMDCSIFS 97
Query: 423 GAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNV 482
+ A L GRQLH Q + G+ +S G +L+ Y + + VF+ M
Sbjct: 98 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRKVFDEMKER 157
Query: 483 DSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYF 542
+ V+W +I+ ++ + L+ +M EG P+ TF L G+ G +
Sbjct: 158 NVVTWTTLISGYARNSMNDEVLTLFMRMQNEGTQPNSFTFAAALGVLAEEGVGGRGLQ-V 216
Query: 543 ETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGN 602
T+ G+ I+L + G +A+ + D K S W ++++G +G
Sbjct: 217 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVK-SVVTWNSMISGYAANG- 274
Query: 603 IDL 605
+DL
Sbjct: 275 LDL 277
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 279/779 (35%), Positives = 417/779 (53%), Gaps = 66/779 (8%)
Query: 60 YCKSL---KLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVF 116
YC +L K ++AR + + Q ++ L+ Y NV LAR F+ ++ RD
Sbjct: 63 YCTNLQSAKCLHARLVVSKQIQ-NVCISAKLVNLYCYLGNVALARHTFDH--IQNRDVYA 119
Query: 117 YNAMITAYSHNSNGHAAIELFR-DMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCT 175
+N MI+ Y N I F M + PD TF SVL A +++ K +HC
Sbjct: 120 WNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNK----IHCL 175
Query: 176 VVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGY 235
+K G V +LI +Y S +G AR +FDEMP RD SW M++GY
Sbjct: 176 ALKFGFMWDVYVAASLIHLY---------SRYKAVGNARILFDEMPVRDMGSWNAMISGY 226
Query: 236 VKNDYLDAAREFLDGMSENVGVAWNALIS-----GYVHRELKMLMLRI----QLDEFTYT 286
++ A +G+ V +L+S G +R + + I + + F
Sbjct: 227 CQSGNAKEALTLSNGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESELFVSN 286
Query: 287 SVISACANSGLFRLGKQV----------------HAYLLRTEAKPTPEFSLPVNNALVTL 330
+I A G R ++V AY L + P SL L +
Sbjct: 287 KLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYELNEQ--PLRAISLFQEMRLSRI 344
Query: 331 YWKCGKVNEARDIFNQMPE------------------RDLVSWNAILSAYVSAGLIDEAK 372
C + I +Q+ + D+ NA++ Y GL+D A+
Sbjct: 345 QPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSAR 404
Query: 373 SLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYA-FAGAITSCAGL 431
++F + +++SW +ISG AQNG+ E +++++ M EG + + + +C+
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQA 464
Query: 432 GALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMI 491
GAL G +LH +L+ +G + +L MY +CG +E A +F +P V+SV WN +I
Sbjct: 465 GALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLI 524
Query: 492 AALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGI 551
A G HG+G +A+ L+++ML EG+ PD ITF+T+LSAC+H+GLV EG+ FE M YGI
Sbjct: 525 ACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGI 584
Query: 552 PPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAE 611
P HY +D+ RAG+ A I S+ +P A IW ALL+ CR+HGN+DLG A+E
Sbjct: 585 TPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASE 644
Query: 612 QLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFL 671
LF++ P H G +VLLSNMYA+ G+W+ +R + +G++K PG S +EVDNKV VF
Sbjct: 645 HLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDNKVEVFY 704
Query: 672 VDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFG 731
+ HP + +Y+ L L +++ +GYVPD +FVL D+E D+KE+ L +HSE+LA+AF
Sbjct: 705 TGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSERLAIAFA 764
Query: 732 LMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
L+ P T+R+ KNLR+CGDCH+ KF+SK+ REI+VRD RFHHF++G CSCGDYW
Sbjct: 765 LIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSNRFHHFKNGVCSCGDYW 823
Score = 194 bits (493), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 173/667 (25%), Positives = 285/667 (42%), Gaps = 137/667 (20%)
Query: 4 KNADYIRTLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKS 63
K D + TL RY + LQ A+ +HA ++ S I +L+++YC
Sbjct: 52 KEIDDVHTLF-RYCTNLQS-----------AKCLHARLVVSKQIQNVCISAKLVNLYCYL 99
Query: 64 LKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITA 123
+ AR FD I D+ A +N MI+
Sbjct: 100 GNVALARHTFDHIQNRDVYA---------------------------------WNLMISG 126
Query: 124 YSHNSNGHAAIELFR-DMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTG 182
Y N I F M + PD TF SVL A +++ K +HC +K G
Sbjct: 127 YGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKACRTVIDGNK----IHCLALKFGFM 182
Query: 183 LFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLD 242
V +LI +Y S +G AR +FDEMP RD SW M++GY ++
Sbjct: 183 WDVYVAASLIHLY---------SRYKAVGNARILFDEMPVRDMGSWNAMISGYCQSGNAK 233
Query: 243 AAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGK 302
A +G+ +D T S++SAC +G F G
Sbjct: 234 EALTLSNGLR--------------------------AMDSVTVVSLLSACTEAGDFNRGV 267
Query: 303 QVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAY 362
+H+Y + K E L V+N L+ LY + G++ + + +F++M RDL+SWN+I+ AY
Sbjct: 268 TIHSYSI----KHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAY 323
Query: 363 VSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFA 422
+ E+ L + LF +MRL +P
Sbjct: 324 --------------ELNEQPL-----------------RAISLFQEMRLSRIQPDCLTLI 352
Query: 423 GAITSCAGLGALENGRQLHAQLVHSG-YDSSLSAGNALITMYARCGVVEAANCVFNTMPN 481
+ + LG + R + + G + ++ GNA++ MYA+ G+V++A VFN +PN
Sbjct: 353 SLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLPN 412
Query: 482 VDSVSWNAMIAALGQHGNGARAIELYEQMLKEG-ILPDRITFLTVLSACNHAGLVKEGRR 540
D +SWN +I+ Q+G + AIE+Y M +EG I ++ T+++VL AC+ AG +++G +
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMK 472
Query: 541 YFETMHG---PYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGC 597
+HG G+ D+ + G+ +A + +P S P W L+A
Sbjct: 473 ----LHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVP-WNTLIACH 527
Query: 598 RIHGNIDLGIQAAEQLFQ--LMPHHAGTYVLLSNMYANLGRWDDAARVRKLMR-DRGVK- 653
HG+ + + +++ + P H T+V L + ++ G D+ ++M+ D G+
Sbjct: 528 GFHGHGEKAVMLFKEMLDEGVKPDHI-TFVTLLSACSHSGLVDEGQWCFEMMQTDYGITP 586
Query: 654 --KEPGC 658
K GC
Sbjct: 587 SLKHYGC 593
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 112/467 (23%), Positives = 202/467 (43%), Gaps = 102/467 (21%)
Query: 36 SVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASD 95
++H++ I G + + N+LID+Y + +L + +FD + D+++ ++I AY
Sbjct: 268 TIHSYSIKHGLESELFVSNKLIDLYAEFGRLRDCQKVFDRMYVRDLISWNSIIKAYE--- 324
Query: 96 NVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSV 155
N+ PL+ AI LF++MR ++PD T S+
Sbjct: 325 --------LNEQPLR----------------------AISLFQEMRLSRIQPDCLTLISL 354
Query: 156 LSALALIVEEEKQCMQMHCTVVKSGTGLF-TSVLNALISVYVKCVSSPFVSSRSLMGAAR 214
S L+ + + + C + ++ G L ++ NA++ +Y K L+ +AR
Sbjct: 355 ASILSQL-GDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKL---------GLVDSAR 404
Query: 215 RVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKML 274
VF+ +P D +SW T+++GY +N + A E + M E +A N
Sbjct: 405 AVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAAN-------------- 450
Query: 275 MLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKC 334
+ T+ SV+ AC+ +G R G ++H LL K + V +L +Y KC
Sbjct: 451 -------QGTWVSVLPACSQAGALRQGMKLHGRLL----KNGLYLDVFVVTSLADMYGKC 499
Query: 335 GKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLA 394
G++ +A +F Q+P + V WN +++ +
Sbjct: 500 GRLEDALSLFYQIPRVNSVPWNTLIACH-------------------------------G 528
Query: 395 QNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQL-VHSGYDSSL 453
+G+GE+ + LF +M EG KP F +++C+ G ++ G+ + G SL
Sbjct: 529 FHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSL 588
Query: 454 SAGNALITMYARCGVVEAANCVFNTMP-NVDSVSWNAMIAALGQHGN 499
++ MY R G +E A +M D+ W A+++A HGN
Sbjct: 589 KHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGN 635
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/348 (22%), Positives = 148/348 (42%), Gaps = 51/348 (14%)
Query: 52 IINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKM 111
I+++L DI ++ + V TL DI ++ Y+ V AR +FN P
Sbjct: 357 ILSQLGDI--RACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLGLVDSARAVFNWLP--N 412
Query: 112 RDTVFYNAMITAYSHNSNGHAAIELFRDMRRD-DVKPDNFTFTSVLSALALIVEEEKQCM 170
D + +N +I+ Y+ N AIE++ M + ++ + T+ SVL A + +Q M
Sbjct: 413 TDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQ-AGALRQGM 471
Query: 171 QMHCTVVKSGTGLFTSVLNALISVYVKC----------------VSSPF---VSSRSLMG 211
++H ++K+G L V+ +L +Y KC S P+ ++ G
Sbjct: 472 KLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHG 531
Query: 212 AARR-------VFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVA-----W 259
+ + DE + D +++ T+++ + +D + + M + G+ +
Sbjct: 532 HGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHY 591
Query: 260 NALI-----SGYVHRELKMLM-LRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEA 313
++ +G + LK + + +Q D + +++SAC G LGK +L E
Sbjct: 592 GCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFEVE- 650
Query: 314 KPTPEFSLPVNNALVTLYWKCGK---VNEARDIFNQMPERDLVSWNAI 358
PE + + L +Y GK V+E R I + R W+++
Sbjct: 651 ---PE-HVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSM 694
>sp|Q9M4P3|PP316_ARATH Pentatricopeptide repeat-containing protein At4g16835,
mitochondrial OS=Arabidopsis thaliana GN=DYW10 PE=2 SV=3
Length = 656
Score = 480 bits (1235), Expect = e-134, Method: Compositional matrix adjust.
Identities = 249/584 (42%), Positives = 349/584 (59%), Gaps = 35/584 (5%)
Query: 208 SLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYV 267
S M A ++FDE+PE D S+ M++ YV+N + A+ F D M +WN +I+GY
Sbjct: 107 SRMMEAHQLFDEIPEPDTFSYNIMLSCYVRNVNFEKAQSFFDRMPFKDAASWNTMITGYA 166
Query: 268 HRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNAL 327
R G+ A L E S NA+
Sbjct: 167 RR-------------------------------GEMEKARELFYSMMEKNEVSW---NAM 192
Query: 328 VTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMR-ERNLLSW 386
++ Y +CG + +A F P R +V+W A+++ Y+ A ++ A+++F+ M +NL++W
Sbjct: 193 ISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLVTW 252
Query: 387 TVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVH 446
MISG +N E+GLKLF M EG +P + A+ C+ L AL+ GRQ+H +
Sbjct: 253 NAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIVSK 312
Query: 447 SGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIEL 506
S + ++A +LI+MY +CG + A +F M D V+WNAMI+ QHGN +A+ L
Sbjct: 313 STLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNADKALCL 372
Query: 507 YEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLC 566
+ +M+ I PD ITF+ VL ACNHAGLV G YFE+M Y + P DHY +DLL
Sbjct: 373 FREMIDNKIRPDWITFVAVLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHYTCMVDLLG 432
Query: 567 RAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVL 626
RAGK EA +I S+PF+P A ++ LL CR+H N++L AAE+L QL +A YV
Sbjct: 433 RAGKLEEALKLIRSMPFRPHAAVFGTLLGACRVHKNVELAEFAAEKLLQLNSQNAAGYVQ 492
Query: 627 LSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKY 686
L+N+YA+ RW+D ARVRK M++ V K PG SWIE+ NKVH F D HPE +++K
Sbjct: 493 LANIYASKNRWEDVARVRKRMKESNVVKVPGYSWIEIRNKVHHFRSSDRIHPELDSIHKK 552
Query: 687 LEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKN 746
L++L +M+ GY P+ +F LH++E +QKE L HSEKLAVAFG +KLP G+ ++V KN
Sbjct: 553 LKELEKKMKLAGYKPELEFALHNVEEEQKEKLLLWHSEKLAVAFGCIKLPQGSQIQVFKN 612
Query: 747 LRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
LRICGDCH A KF+S++ REI+VRD RFHHF+DG CSCGDYW
Sbjct: 613 LRICGDCHKAIKFISEIEKREIIVRDTTRFHHFKDGSCSCGDYW 656
Score = 125 bits (315), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 101/386 (26%), Positives = 168/386 (43%), Gaps = 76/386 (19%)
Query: 28 PITSSLARSVHAHMISS------GFKPREHII--NRLIDIYCKSLKLVYARTLFDEIPQP 79
P+ +AR V + I G + + I + LI I +++ A LFDEIP+P
Sbjct: 63 PLNKIIARCVRSGDIDGALRVFHGMRAKNTITWNSLLIGISKDPSRMMEAHQLFDEIPEP 122
Query: 80 DIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRD 139
D + +++ Y + N + A+ F++ P K D +N MIT Y+ A ELF
Sbjct: 123 DTFSYNIMLSCYVRNVNFEKAQSFFDRMPFK--DAASWNTMITGYARRGEMEKARELFYS 180
Query: 140 -MRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKC 198
M +++V NA+IS Y++C
Sbjct: 181 MMEKNEVS-----------------------------------------WNAMISGYIEC 199
Query: 199 VSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVG-V 257
+ A F P R ++WT M+TGY+K ++ A M+ N V
Sbjct: 200 GD---------LEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVNKNLV 250
Query: 258 AWNALISGYVHR---ELKMLMLRIQLDEFT------YTSVISACANSGLFRLGKQVHAYL 308
WNA+ISGYV E + + R L+E +S + C+ +LG+Q+H +
Sbjct: 251 TWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQLGRQIHQIV 310
Query: 309 LRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLI 368
+K T + +L+++Y KCG++ +A +F M ++D+V+WNA++S Y G
Sbjct: 311 ----SKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVAWNAMISGYAQHGNA 366
Query: 369 DEAKSLFEAMRERNLL-SWTVMISGL 393
D+A LF M + + W ++ L
Sbjct: 367 DKALCLFREMIDNKIRPDWITFVAVL 392
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 82/304 (26%), Positives = 135/304 (44%), Gaps = 50/304 (16%)
Query: 54 NRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRD 113
N +I Y + L A F P +VA T +I Y + V+LA MF + ++
Sbjct: 190 NAMISGYIECGDLEKASHFFKVAPVRGVVAWTAMITGYMKAKKVELAEAMFKDMTVN-KN 248
Query: 114 TVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSV------LSALALIVEEEK 167
V +NAMI+ Y NS ++LFR M + ++P++ +S LSAL L
Sbjct: 249 LVTWNAMISGYVENSRPEDGLKLFRAMLEEGIRPNSSGLSSALLGCSELSALQL------ 302
Query: 168 QCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELS 227
Q+H V KS + L +LIS+Y KC +G A ++F+ M ++D ++
Sbjct: 303 -GRQIHQIVSKSTLCNDVTALTSLISMYCKC---------GELGDAWKLFEVMKKKDVVA 352
Query: 228 WTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTS 287
W M++GY ++ D A M +N +I+ D T+ +
Sbjct: 353 WNAMISGYAQHGNADKALCLFREMIDN----------------------KIRPDWITFVA 390
Query: 288 VISACANSGLFRLGKQVHAYLLRT-EAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQ 346
V+ AC ++GL +G ++R + +P P+ +V L + GK+ EA +
Sbjct: 391 VLLACNHAGLVNIGMAYFESMVRDYKVEPQPDHY----TCMVDLLGRAGKLEEALKLIRS 446
Query: 347 MPER 350
MP R
Sbjct: 447 MPFR 450
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 53/126 (42%), Gaps = 33/126 (26%)
Query: 33 LARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYS 92
L R +H + S + LI +YCK +L A LF+ + + D+VA
Sbjct: 302 LGRQIHQIVSKSTLCNDVTALTSLISMYCKCGELGDAWKLFEVMKKKDVVA--------- 352
Query: 93 ASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTF 152
+NAMI+ Y+ + N A+ LFR+M + ++PD TF
Sbjct: 353 ------------------------WNAMISGYAQHGNADKALCLFREMIDNKIRPDWITF 388
Query: 153 TSVLSA 158
+VL A
Sbjct: 389 VAVLLA 394
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 480 bits (1235), Expect = e-134, Method: Compositional matrix adjust.
Identities = 266/768 (34%), Positives = 404/768 (52%), Gaps = 118/768 (15%)
Query: 32 SLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAY 91
+L + VH + G + N LI++YCK K +ART+FD + +
Sbjct: 332 ALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRKFGFARTVFDNMSE------------- 378
Query: 92 SASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFT 151
RD + +N++I + N A+ LF + R +KPD +T
Sbjct: 379 --------------------RDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 152 FTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMG 211
TSVL A + + E Q+H +K + VS FVS
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIK-----------------INNVSDSFVS------ 455
Query: 212 AARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYV---- 267
T ++ Y +N + A + + ++ VAWNA+++GY
Sbjct: 456 -----------------TALIDAYSRNRCMKEAEILFERHNFDL-VAWNAMMAGYTQSHD 497
Query: 268 -HRELKMLMLRIQL----DEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLP 322
H+ LK+ L + D+FT +V C GKQVHAY +++
Sbjct: 498 GHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKS----------- 546
Query: 323 VNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERN 382
D+ DL + IL YV G + A+ F+++ +
Sbjct: 547 -----------------GYDL-------DLWVSSGILDMYVKCGDMSAAQFAFDSIPVPD 582
Query: 383 LLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHA 442
++WT MISG +NG E +FSQMRL G P ++ A + + L ALE GRQ+HA
Sbjct: 583 DVAWTTMISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHA 642
Query: 443 QLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGAR 502
+ + G +L+ MYA+CG ++ A C+F + ++ +WNAM+ L QHG G
Sbjct: 643 NALKLNCTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKE 702
Query: 503 AIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFI 562
++L++QM GI PD++TF+ VLSAC+H+GLV E ++ +MHG YGI P +HY+
Sbjct: 703 TLQLFKQMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLA 762
Query: 563 DLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAG 622
D L RAG +A+++I+S+ + SA ++ LLA CR+ G+ + G + A +L +L P +
Sbjct: 763 DALGRAGLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSS 822
Query: 623 TYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQA 682
YVLLSNMYA +WD+ R +M+ VKK+PG SWIEV NK+H+F+VDD ++ + +
Sbjct: 823 AYVLLSNMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTEL 882
Query: 683 VYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVR 742
+Y+ ++ ++ ++++ GYVP+T F L D+E ++KE AL HSEKLAVAFGL+ P +R
Sbjct: 883 IYRKVKDMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIR 942
Query: 743 VLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
V+KNLR+CGDCHNA K+++KV REIV+RD RFH F+DG CSCGDYW
Sbjct: 943 VIKNLRVCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 188 bits (478), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 173/692 (25%), Positives = 297/692 (42%), Gaps = 119/692 (17%)
Query: 7 DYIRTLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKL 66
D + T + L+LC + +S S H + G E + L++IY K K+
Sbjct: 139 DVVYTSRMTLSPMLKLCLHSGYVWAS--ESFHGYACKIGLDGDEFVAGALVNIYLKFGKV 196
Query: 67 VYARTLFDEIPQPDIVARTTLIAAY----SASDNVKLAREM----FNKTPLKMR------ 112
+ LF+E+P D+V ++ AY + + L+ N + +R
Sbjct: 197 KEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARIS 256
Query: 113 ----------------------DTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNF 150
+ +F N ++ Y H+ A ++ F DM DV+ D
Sbjct: 257 GDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVESDVECDQV 316
Query: 151 TFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLM 210
TF +L A A+ V+ Q+HC +K G L +V N+LI++Y K
Sbjct: 317 TFILML-ATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLINMYCKLRK---------F 366
Query: 211 GAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRE 270
G AR VFD M ERD +SW +++ G+A N L V
Sbjct: 367 GFARTVFDNMSERDLISWNSVIA----------------------GIAQNGLEVEAVCLF 404
Query: 271 LKMLMLRIQLDEFTYTSVISACAN--SGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALV 328
+++L ++ D++T TSV+ A ++ GL L KQVH + ++ + F V+ AL+
Sbjct: 405 MQLLRCGLKPDQYTMTSVLKAASSLPEGL-SLSKQVHVHAIKIN-NVSDSF---VSTALI 459
Query: 329 TLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTV 388
Y + + EA +F + DLV+WNA
Sbjct: 460 DAYSRNRCMKEAEILFER-HNFDLVAWNA------------------------------- 487
Query: 389 MISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSG 448
M++G Q+ G + LKLF+ M +G + D+ A +C L A+ G+Q+HA + SG
Sbjct: 488 MMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQGKQVHAYAIKSG 547
Query: 449 YDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYE 508
YD L + ++ MY +CG + AA F+++P D V+W MI+ ++G RA ++
Sbjct: 548 YDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTTMISGCIENGEEERAFHVFS 607
Query: 509 QMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHG-PYGIPPGEDHY--ARFIDLL 565
QM G+LPD T T+ A + +++GR+ +H + D + +D+
Sbjct: 608 QMRLMGVLPDEFTIATLAKASSCLTALEQGRQ----IHANALKLNCTNDPFVGTSLVDMY 663
Query: 566 CRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQL-MPHHAGTY 624
+ G +A + + + W A+L G HG +Q +Q+ L + T+
Sbjct: 664 AKCGSIDDAYCLFKRIEMM-NITAWNAMLVGLAQHGEGKETLQLFKQMKSLGIKPDKVTF 722
Query: 625 VLLSNMYANLGRWDDAAR-VRKLMRDRGVKKE 655
+ + + ++ G +A + +R + D G+K E
Sbjct: 723 IGVLSACSHSGLVSEAYKHMRSMHGDYGIKPE 754
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 159/643 (24%), Positives = 257/643 (39%), Gaps = 135/643 (20%)
Query: 26 RNPITSS---LARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIV 82
RN ITSS L + HA +++ P +IN LI +Y K L YAR +FD++P D+V
Sbjct: 47 RNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPDRDLV 106
Query: 83 ARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRR 142
+ +++AAY+ S + N A LFR +R+
Sbjct: 107 SWNSILAAYAQSSECVV----------------------------ENIQQAFLLFRILRQ 138
Query: 143 DDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSP 202
D V T + +L L L H K G V AL+++Y+K
Sbjct: 139 DVVYTSRMTLSPMLK-LCLHSGYVWASESFHGYACKIGLDGDEFVAGALVNIYLKF---- 193
Query: 203 FVSSRSLMGAARRVFDEMPERDELSWTTMMTGYV----KNDYLDAAREF----------- 247
+ + +F+EMP RD + W M+ Y+ K + +D + F
Sbjct: 194 -----GKVKEGKVLFEEMPYRDVVLWNLMLKAYLEMGFKEEAIDLSSAFHSSGLNPNEIT 248
Query: 248 ------LDGMSENVG-----------------VAWNALISGYVHRELKMLMLR------- 277
+ G + G + N +S Y+H +L+
Sbjct: 249 LRLLARISGDDSDAGQVKSFANGNDASSVSEIIFRNKGLSEYLHSGQYSALLKCFADMVE 308
Query: 278 --IQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCG 335
++ D+ T+ +++ LG+QVH L K + L V+N+L+ +Y K
Sbjct: 309 SDVECDQVTFILMLATAVKVDSLALGQQVHCMAL----KLGLDLMLTVSNSLINMYCKLR 364
Query: 336 KVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQ 395
K AR +F+ M ERDL+SWN++ I+G+AQ
Sbjct: 365 KFGFARTVFDNMSERDLISWNSV-------------------------------IAGIAQ 393
Query: 396 NGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGL-GALENGRQLHAQLVHSGYDSSLS 454
NG E + LF Q+ G KP Y + + + L L +Q+H + S
Sbjct: 394 NGLEVEAVCLFMQLLRCGLKPDQYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSF 453
Query: 455 AGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEG 514
ALI Y+R ++ A +F N D V+WNAM+A Q +G + ++L+ M K+G
Sbjct: 454 VSTALIDAYSRNRCMKEAEILFER-HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQG 512
Query: 515 ILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDH----YARFIDLLCRAGK 570
D T TV C + +G++ +H Y I G D + +D+ + G
Sbjct: 513 ERSDDFTLATVFKTCGFLFAINQGKQ----VHA-YAIKSGYDLDLWVSSGILDMYVKCGD 567
Query: 571 FSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQL 613
S A+ DS+P P W +++GC +G + Q+
Sbjct: 568 MSAAQFAFDSIPV-PDDVAWTTMISGCIENGEEERAFHVFSQM 609
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 477 bits (1227), Expect = e-133, Method: Compositional matrix adjust.
Identities = 245/639 (38%), Positives = 369/639 (57%), Gaps = 61/639 (9%)
Query: 213 ARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHR--- 269
AR++FDEMP+R+ +SW +++GY+KN +D AR+ D M E V+W AL+ GYVH
Sbjct: 67 ARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKV 126
Query: 270 -----------ELKMLMLRIQLDEFTYTSVIS-ACA-------------NSGLFRLGKQV 304
E + + L F I AC S + L K+
Sbjct: 127 DVAESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEG 186
Query: 305 HAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVS 364
R E S+ +VT Y + +V++AR IF+ MPE+ VSW ++L YV
Sbjct: 187 RVDEAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIFDVMPEKTEVSWTSMLMGYVQ 246
Query: 365 AGLIDEAKSLFE-------------------------------AMRERNLLSWTVMISGL 393
G I++A+ LFE +M+ERN SW +I
Sbjct: 247 NGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIH 306
Query: 394 AQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSL 453
+NG+ E L LF M+ +G +P ++ CA L +L +G+Q+HAQLV +D +
Sbjct: 307 ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDV 366
Query: 454 SAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQM-LK 512
+ L+TMY +CG + + +F+ P+ D + WN++I+ HG G A++++ +M L
Sbjct: 367 YVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLS 426
Query: 513 EGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFS 572
P+ +TF+ LSAC++AG+V+EG + +E+M +G+ P HYA +D+L RAG+F+
Sbjct: 427 GSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFN 486
Query: 573 EAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYA 632
EA ++IDS+ +P A +W +LL CR H +D+ A++L ++ P ++GTY+LLSNMYA
Sbjct: 487 EAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYA 546
Query: 633 NLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDD-TAHPEAQAVYKYLEQLV 691
+ GRW D A +RKLM+ R V+K PGCSW EV+NKVH F +HPE +++ K L++L
Sbjct: 547 SQGRWADVAELRKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELD 606
Query: 692 LEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICG 751
+R+ GY PD + LHD++ ++K +L HSE+LAVA+ L+KL G +RV+KNLR+C
Sbjct: 607 GLLREAGYNPDCSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCS 666
Query: 752 DCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
DCH A K +SKV REI++RD RFHHFR+G+CSC DYW
Sbjct: 667 DCHTAIKIISKVKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 147 bits (370), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 127/497 (25%), Positives = 222/497 (44%), Gaps = 100/497 (20%)
Query: 48 PREHII--NRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFN 105
P +II N L+ Y K+ ++ AR +FD +P+ ++V+ T L+ Y + V +A +F
Sbjct: 75 PDRNIISWNGLVSGYMKNGEIDEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFW 134
Query: 106 KTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEE 165
K P K + V + M+ + + A +L+ +M D DN TS++ L
Sbjct: 135 KMPEK--NKVSWTVMLIGFLQDGRIDDACKLY-EMIPD---KDNIARTSMIHGL------ 182
Query: 166 EKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDE 225
C + V +F + + + V+ ++R + AR++FD MPE+ E
Sbjct: 183 ---CKEGR---VDEAREIFDEMSERSVITWTTMVTGYGQNNR--VDDARKIFDVMPEKTE 234
Query: 226 LSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHR---------------- 269
+SWT+M+ GYV+N ++ A E + M +A NA+ISG +
Sbjct: 235 VSWTSMLMGYVQNGRIEDAEELFEVMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKER 294
Query: 270 -----------------ELKMLMLRIQLDEF-------TYTSVISACANSGLFRLGKQVH 305
EL+ L L I + + T S++S CA+ GKQVH
Sbjct: 295 NDASWQTVIKIHERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVH 354
Query: 306 AYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSA 365
A L+R + + + V + L+T+Y KCG++ +++ IF++ P +D++ WN+I+S Y S
Sbjct: 355 AQLVRCQF----DVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASH 410
Query: 366 GLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEG-FKPCDYAFAGA 424
GL GEE LK+F +M L G KP + F
Sbjct: 411 GL-------------------------------GEEALKVFCEMPLSGSTKPNEVTFVAT 439
Query: 425 ITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNA-LITMYARCGVVEAANCVFNTMP-NV 482
+++C+ G +E G +++ + ++A A ++ M R G A + ++M
Sbjct: 440 LSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTVEP 499
Query: 483 DSVSWNAMIAALGQHGN 499
D+ W +++ A H
Sbjct: 500 DAAVWGSLLGACRTHSQ 516
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 204/420 (48%), Gaps = 35/420 (8%)
Query: 213 ARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGY-----V 267
AR++FD + SW +M+ GY N AR+ D M + ++WN L+SGY +
Sbjct: 36 ARKLFDSCDSKSISSWNSMVAGYFANLMPRDARKLFDEMPDRNIISWNGLVSGYMKNGEI 95
Query: 268 HRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNAL 327
K+ L + + ++T+++ ++G + + + + PE + +
Sbjct: 96 DEARKVFDLMPERNVVSWTALVKGYVHNGKVDVAESLFWKM--------PEKNKVSWTVM 147
Query: 328 VTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWT 387
+ + + G++++A ++ +P++D ++ +++ G +DEA+ +F+ M ER++++WT
Sbjct: 148 LIGFLQDGRIDDACKLYEMIPDKDNIARTSMIHGLCKEGRVDEAREIFDEMSERSVITWT 207
Query: 388 VMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHA-QLVH 446
M++G QN ++ K+F M + + ++ + +G ++NGR A +L
Sbjct: 208 TMVTGYGQNNRVDDARKIFDVMP----EKTEVSWTSML-----MGYVQNGRIEDAEELFE 258
Query: 447 SGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIEL 506
+ A NA+I+ + G + A VF++M + SW +I ++G A++L
Sbjct: 259 VMPVKPVIACNAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALDL 318
Query: 507 YEQMLKEGILPDRITFLTVLSACNHAGLVKEGRR-YFETMHGPYGIPPGEDHY--ARFID 563
+ M K+G+ P T +++LS C + G++ + + + + + D Y + +
Sbjct: 319 FILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDV----DVYVASVLMT 374
Query: 564 LLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGT 623
+ + G+ ++K + D P K +W ++++G HG LG + A ++F MP T
Sbjct: 375 MYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASHG---LG-EEALKVFCEMPLSGST 429
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 157/363 (43%), Gaps = 65/363 (17%)
Query: 308 LLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGL 367
L RT + P P N +T + GK++EAR +F+ + + SWN++++ Y + +
Sbjct: 7 LRRTYSTTIPP---PTANVRITHLSRIGKIHEARKLFDSCDSKSISSWNSMVAGYFANLM 63
Query: 368 IDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITS 427
+A+ LF+ M +RN++SW ++SG +NG +E K+F M
Sbjct: 64 PRDARKLFDEMPDRNIISWNGLVSGYMKNGEIDEARKVFDLMP----------------- 106
Query: 428 CAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSW 487
+ ++ + AL+ Y G V+ A +F MP + VSW
Sbjct: 107 ----------------------ERNVVSWTALVKGYVHNGKVDVAESLFWKMPEKNKVSW 144
Query: 488 NAMIAALGQHGNGARAIELYEQMLKEGILPDR--ITFLTVLSACNHAGLVKEGRRYFETM 545
M+ Q G A +LYE ++PD+ I +++ G V E R F+ M
Sbjct: 145 TVMLIGFLQDGRIDDACKLYE------MIPDKDNIARTSMIHGLCKEGRVDEAREIFDEM 198
Query: 546 HGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDL 605
I + + + + +A+ + D +P K W ++L G +G
Sbjct: 199 SERSVIT-----WTTMVTGYGQNNRVDDARKIFDVMPEKTEVS-WTSMLMGYVQNGR--- 249
Query: 606 GIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDN 665
I+ AE+LF++MP + + M + LG+ + A+ R++ +K+ SW V
Sbjct: 250 -IEDAEELFEVMP--VKPVIACNAMISGLGQKGEIAKARRVF--DSMKERNDASWQTV-I 303
Query: 666 KVH 668
K+H
Sbjct: 304 KIH 306
Score = 43.5 bits (101), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/110 (22%), Positives = 56/110 (50%), Gaps = 3/110 (2%)
Query: 34 ARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSA 93
+ VHA ++ F ++ + L+ +Y K +LV ++ +FD P DI+ ++I+ Y++
Sbjct: 350 GKQVHAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYAS 409
Query: 94 SDNVKLAREMFNKTPLK---MRDTVFYNAMITAYSHNSNGHAAIELFRDM 140
+ A ++F + PL + V + A ++A S+ ++++ M
Sbjct: 410 HGLGEEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESM 459
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 476 bits (1225), Expect = e-133, Method: Compositional matrix adjust.
Identities = 265/723 (36%), Positives = 390/723 (53%), Gaps = 94/723 (13%)
Query: 80 DIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRD 139
D+ A T L Y+ V AR++F++ P RD V +N ++ YS N A+E+ +
Sbjct: 169 DLFAMTGLENMYAKCRQVNEARKVFDRMP--ERDLVSWNTIVAGYSQNGMARMALEMVKS 226
Query: 140 MRRDDVKPDNFTFTSVL---SALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYV 196
M +++KP T SVL SAL LI + ++H ++SG ++ AL+ +Y
Sbjct: 227 MCEENLKPSFITIVSVLPAVSALRLISVGK----EIHGYAMRSGFDSLVNISTALVDMYA 282
Query: 197 KCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVG 256
KC S L+ AR+ DGM E
Sbjct: 283 KCGS----------------------------------------LETARQLFDGMLERNV 302
Query: 257 VAWNALISGYVHRE---LKMLMLRIQLDEFTYTSVIS------ACANSGLFRLGKQVHAY 307
V+WN++I YV E ML+ + LDE + +S ACA+ G G+ +H
Sbjct: 303 VSWNSMIDAYVQNENPKEAMLIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIH-- 360
Query: 308 LLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGL 367
+ + + ++ V N+L+++Y KC +V
Sbjct: 361 --KLSVELGLDRNVSVVNSLISMYCKCKEV------------------------------ 388
Query: 368 IDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITS 427
D A S+F ++ R L+SW MI G AQNG + L FSQMR KP + + IT+
Sbjct: 389 -DTAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITA 447
Query: 428 CAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSW 487
A L + + +H ++ S D ++ AL+ MYA+CG + A +F+ M +W
Sbjct: 448 IAELSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTW 507
Query: 488 NAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHG 547
NAMI G HG G A+EL+E+M K I P+ +TFL+V+SAC+H+GLV+ G + F M
Sbjct: 508 NAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKE 567
Query: 548 PYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGI 607
Y I DHY +DLL RAG+ +EA D I +P KP+ ++ A+L C+IH N++
Sbjct: 568 NYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAE 627
Query: 608 QAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKV 667
+AAE+LF+L P G +VLL+N+Y W+ +VR M +G++K PGCS +E+ N+V
Sbjct: 628 KAAERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEV 687
Query: 668 HVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLA 727
H F TAHP+++ +Y +LE+L+ +++ GYVPDT VL +E+D KE LSTHSEKLA
Sbjct: 688 HSFFSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLA 746
Query: 728 VAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCG 787
++FGL+ G T+ V KNLR+C DCHNA K++S V GREIVVRD +RFHHF++G CSCG
Sbjct: 747 ISFGLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCG 806
Query: 788 DYW 790
DYW
Sbjct: 807 DYW 809
Score = 208 bits (529), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 158/567 (27%), Positives = 256/567 (45%), Gaps = 93/567 (16%)
Query: 61 CKSLK-------LVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRD 113
C SLK LV+ L+ E +T L++ + +V A +F P+ +
Sbjct: 47 CSSLKELRQILPLVFKNGLYQEH-----FFQTKLVSLFCRYGSVDEAARVFE--PIDSKL 99
Query: 114 TVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMH 173
V Y+ M+ ++ S+ A++ F MR DDV+P + FT +L E + ++H
Sbjct: 100 NVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCG-DEAELRVGKEIH 158
Query: 174 CTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMT 233
+VKSG L + L ++Y KC + AR+VFD MPERD +SW T++
Sbjct: 159 GLLVKSGFSLDLFAMTGLENMYAKCRQ---------VNEARKVFDRMPERDLVSWNTIVA 209
Query: 234 GYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACA 293
GY +N A E + M E ++ T SV+ A +
Sbjct: 210 GYSQNGMARMALEMVKSMCEE----------------------NLKPSFITIVSVLPAVS 247
Query: 294 NSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLV 353
L +GK++H Y +R+ + ++ ALV +Y KCG + AR +F+ M ER++V
Sbjct: 248 ALRLISVGKEIHGYAMRSGFDSL----VNISTALVDMYAKCGSLETARQLFDGMLERNVV 303
Query: 354 SWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEG 413
SWN+++ AYV QN +E + +F +M EG
Sbjct: 304 SWNSMIDAYV-------------------------------QNENPKEAMLIFQKMLDEG 332
Query: 414 FKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAAN 473
KP D + GA+ +CA LG LE GR +H V G D ++S N+LI+MY +C V+ A
Sbjct: 333 VKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDTAA 392
Query: 474 CVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAG 533
+F + + VSWNAMI Q+G A+ + QM + PD T+++V++A
Sbjct: 393 SMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAELS 452
Query: 534 LVKEGRRYFETMHGPYGIPPGEDHY---ARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIW 590
+ + +HG + + +D+ + G A+ + D + + W
Sbjct: 453 ITHHAK----WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMS-ERHVTTW 507
Query: 591 EALLAGCRIHGNIDLGIQAAEQLFQLM 617
A++ G HG G +AA +LF+ M
Sbjct: 508 NAMIDGYGTHG---FG-KAALELFEEM 530
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 104/384 (27%), Positives = 171/384 (44%), Gaps = 75/384 (19%)
Query: 32 SLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAY 91
S+ + +H + + SGF +I L+D+Y K L AR LFD + + ++V+ ++I AY
Sbjct: 253 SVGKEIHGYAMRSGFDSLVNISTALVDMYAKCGSLETARQLFDGMLERNVVSWNSMIDAY 312
Query: 92 SASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFT 151
++N K A+ +F+ M + VKP + +
Sbjct: 313 VQNENPK---------------------------------EAMLIFQKMLDEGVKPTDVS 339
Query: 152 FTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMG 211
L A A + + E+ +H V+ G SV+N+LIS+Y KC +
Sbjct: 340 VMGALHACADLGDLERGRF-IHKLSVELGLDRNVSVVNSLISMYCKCKE---------VD 389
Query: 212 AARRVFDEMPERDELSWTTMMTGYVKNDY-LDAAREFLDGMSENVGVAWNALISGYVHRE 270
A +F ++ R +SW M+ G+ +N +DA F S V
Sbjct: 390 TAASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTV--------------- 434
Query: 271 LKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTL 330
+ D FTY SVI+A A + K +H ++R+ + ++ V ALV +
Sbjct: 435 --------KPDTFTYVSVITAIAELSITHHAKWIHGVVMRS----CLDKNVFVTTALVDM 482
Query: 331 YWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMR----ERNLLSW 386
Y KCG + AR IF+ M ER + +WNA++ Y + G A LFE M+ + N +++
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTF 542
Query: 387 TVMISGLAQNGYGEEGLKLFSQMR 410
+IS + +G E GLK F M+
Sbjct: 543 LSVISACSHSGLVEAGLKCFYMMK 566
Score = 115 bits (287), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 122/260 (46%), Gaps = 13/260 (5%)
Query: 330 LYWKCGKVNEARDIFNQMPERDLVS----WNAILSAYVSAGLIDEAKSLFEAMRERNLLS 385
L +C + E R I + + L ++S + G +DEA +FE + + +
Sbjct: 43 LLERCSSLKELRQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDSKLNVL 102
Query: 386 WTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLV 445
+ M+ G A+ ++ L+ F +MR + +P Y F + C L G+++H LV
Sbjct: 103 YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKEIHGLLV 162
Query: 446 HSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIE 505
SG+ L A L MYA+C V A VF+ MP D VSWN ++A Q+G A+E
Sbjct: 163 KSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMPERDLVSWNTIVAGYSQNGMARMALE 222
Query: 506 LYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYAR----F 561
+ + M +E + P IT ++VL A + L+ G+ +HG Y + G D
Sbjct: 223 MVKSMCEENLKPSFITIVSVLPAVSALRLISVGKE----IHG-YAMRSGFDSLVNISTAL 277
Query: 562 IDLLCRAGKFSEAKDVIDSL 581
+D+ + G A+ + D +
Sbjct: 278 VDMYAKCGSLETARQLFDGM 297
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 476 bits (1224), Expect = e-133, Method: Compositional matrix adjust.
Identities = 257/718 (35%), Positives = 399/718 (55%), Gaps = 71/718 (9%)
Query: 78 QPDIVARTTLIAAYSASDN-VKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIEL 136
+ D+ +LI + +N + A ++F+K + + V + MIT AI
Sbjct: 199 ESDVCVGCSLIDMFVKGENSFENAYKVFDK--MSELNVVTWTLMITRCMQMGFPREAIRF 256
Query: 137 FRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYV 196
F DM + D FT +SV SA A + E Q+H ++SG L V +L+ +Y
Sbjct: 257 FLDMVLSGFESDKFTLSSVFSACAEL-ENLSLGKQLHSWAIRSG--LVDDVECSLVDMYA 313
Query: 197 KCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVG 256
KC S+ + R+VFD M + +SWT ++TGY+KN + A E ++ SE
Sbjct: 314 KC------SADGSVDDCRKVFDRMEDHSVMSWTALITGYMKN--CNLATEAINLFSE--- 362
Query: 257 VAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPT 316
+ G+V + + FT++S AC N R+GKQV +
Sbjct: 363 ----MITQGHV-----------EPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKR----- 402
Query: 317 PEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFE 376
L N+++ N+++S +V + +++A+ FE
Sbjct: 403 ---GLASNSSVA---------------------------NSVISMFVKSDRMEDAQRAFE 432
Query: 377 AMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALEN 436
++ E+NL+S+ + G +N E+ KL S++ + FA ++ A +G++
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRK 492
Query: 437 GRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQ 496
G Q+H+Q+V G + NALI+MY++CG ++ A+ VFN M N + +SW +MI +
Sbjct: 493 GEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENRNVISWTSMITGFAK 552
Query: 497 HGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGED 556
HG R +E + QM++EG+ P+ +T++ +LSAC+H GLV EG R+F +M+ + I P +
Sbjct: 553 HGFAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVGLVSEGWRHFNSMYEDHKIKPKME 612
Query: 557 HYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQL 616
HYA +DLLCRAG ++A + I+++PF+ +W L CR+H N +LG AA ++ +L
Sbjct: 613 HYACMVDLLCRAGLLTDAFEFINTMPFQADVLVWRTFLGACRVHSNTELGKLAARKILEL 672
Query: 617 MPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTA 676
P+ Y+ LSN+YA G+W+++ +R+ M++R + KE GCSWIEV +K+H F V DTA
Sbjct: 673 DPNEPAAYIQLSNIYACAGKWEESTEMRRKMKERNLVKEGGCSWIEVGDKIHKFYVGDTA 732
Query: 677 HPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYA----LSTHSEKLAVAFGL 732
HP A +Y L++L+ E+++ GYVPDT VLH +E + E L HSEK+AVAFGL
Sbjct: 733 HPNAHQIYDELDRLITEIKRCGYVPDTDLVLHKLEEENDEAEKERLLYQHSEKIAVAFGL 792
Query: 733 MKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
+ VRV KNLR+CGDCHNA K++S V GREIV+RD RFHHF+DGKCSC DYW
Sbjct: 793 ISTSKSRPVRVFKNLRVCGDCHNAMKYISTVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 141/585 (24%), Positives = 260/585 (44%), Gaps = 91/585 (15%)
Query: 65 KLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTP-LKMRDTVFYNAMITA 123
KLV+AR + +I +PD V +LI+ YS S + A ++F RD V ++AM+
Sbjct: 82 KLVHARLIEFDI-EPDSVLYNSLISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMAC 140
Query: 124 YSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGL 183
Y +N AI++F + + P+++ +T+V+ A + V + G
Sbjct: 141 YGNNGRELDAIKVFVEFLELGLVPNDYCYTAVIRACS---------NSDFVGVGRVTLGF 191
Query: 184 FTSVLNALISVYVKC-VSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDY-L 241
+ V V C + FV + A +VFD+M E + ++WT M+T ++ +
Sbjct: 192 LMKTGHFESDVCVGCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPR 251
Query: 242 DAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLG 301
+A R FLD ++SG+ + D+FT +SV SACA LG
Sbjct: 252 EAIRFFLD-----------MVLSGF------------ESDKFTLSSVFSACAELENLSLG 288
Query: 302 KQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKC---GKVNEARDIFNQMPERDLVSWNAI 358
KQ+H++ +R+ E S LV +Y KC G V++ R +F++M + ++SW A+
Sbjct: 289 KQLHSWAIRSGLVDDVECS------LVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTAL 342
Query: 359 LSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEG-FKPC 417
++ Y M+ NL + E + LFS+M +G +P
Sbjct: 343 ITGY---------------MKNCNLAT---------------EAINLFSEMITQGHVEPN 372
Query: 418 DYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFN 477
+ F+ A +C L G+Q+ Q G S+ S N++I+M+ + +E A F
Sbjct: 373 HFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDRMEDAQRAFE 432
Query: 478 TMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKE 537
++ + VS+N + ++ N +A +L ++ + + TF ++LS + G +++
Sbjct: 433 SLSEKNLVSYNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFASLLSGVANVGSIRK 492
Query: 538 GRRYFETMHG---PYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALL 594
G E +H G+ + I + + G A V + + + + W +++
Sbjct: 493 G----EQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR-NVISWTSMI 547
Query: 595 AGCRIHGNIDLGIQAAEQLFQLMPH----HAGTYVLLSNMYANLG 635
G HG I+ E Q++ + TYV + + +++G
Sbjct: 548 TGFAKHG---FAIRVLETFNQMIEEGVKPNEVTYVAILSACSHVG 589
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 143/602 (23%), Positives = 255/602 (42%), Gaps = 129/602 (21%)
Query: 106 KTPLKMRDTV-----FYNAMITAYSHNSNGHAAIELFRDMRRDDVKP-DNFTFTSVLSAL 159
K P+K + +V + +I + + + A+ M RD ++P D+ TF+S+L +
Sbjct: 13 KLPIKSQPSVSNRINVADRLILRHLNAGDLRGAVSALDLMARDGIRPMDSVTFSSLLKS- 71
Query: 160 ALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDE 219
+ + + +H +++ + + N+LIS+Y K S A VF+
Sbjct: 72 CIRARDFRLGKLVHARLIEFDIEPDSVLYNSLISLYSKSGDS---------AKAEDVFET 122
Query: 220 M---PERDELSWTTMMTGYVKNDY-LDAAREFLDGMSENVGVAWNALISGYVHRELKMLM 275
M +RD +SW+ MM Y N LDA + F++ L
Sbjct: 123 MRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVE-----------------------FLE 159
Query: 276 LRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKC- 334
L + +++ YT+VI AC+NS +G+ +L++T E + V +L+ ++ K
Sbjct: 160 LGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKT---GHFESDVCVGCSLIDMFVKGE 216
Query: 335 GKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLA 394
A +F++M E ++V+W T+MI+
Sbjct: 217 NSFENAYKVFDKMSELNVVTW-------------------------------TLMITRCM 245
Query: 395 QNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLS 454
Q G+ E ++ F M L GF+ + + ++CA L L G+QLH+ + SG +
Sbjct: 246 QMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAELENLSLGKQLHSWAIRSGLVDDVE 305
Query: 455 AGNALITMYARC---GVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGA-RAIELYEQM 510
+L+ MYA+C G V+ VF+ M + +SW A+I ++ N A AI L+ +M
Sbjct: 306 C--SLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWTALITGYMKNCNLATEAINLFSEM 363
Query: 511 LKEG-ILPDRITFLTVLSACNHA----------------GL------------------- 534
+ +G + P+ TF + AC + GL
Sbjct: 364 ITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAFKRGLASNSSVANSVISMFVKSDR 423
Query: 535 VKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKP---SAPIWE 591
+++ +R FE++ + Y F+D CR F +A ++ + + SA +
Sbjct: 424 MEDAQRAFESLSEKNLVS-----YNTFLDGTCRNLNFEQAFKLLSEITERELGVSAFTFA 478
Query: 592 ALLAGCRIHGNIDLGIQAAEQLFQL-MPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDR 650
+LL+G G+I G Q Q+ +L + + L +MY+ G D A+RV M +R
Sbjct: 479 SLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYSKCGSIDTASRVFNFMENR 538
Query: 651 GV 652
V
Sbjct: 539 NV 540
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 106/422 (25%), Positives = 179/422 (42%), Gaps = 57/422 (13%)
Query: 280 LDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNE 339
+D T++S++ +C + FRLGK VHA L+ + +P + N+L++LY K G +
Sbjct: 60 MDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDS----VLYNSLISLYSKSGDSAK 115
Query: 340 ARDIFNQM---PERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQN 396
A D+F M +RD+VSW+A+++ Y N
Sbjct: 116 AEDVFETMRRFGKRDVVSWSAMMACY-------------------------------GNN 144
Query: 397 GYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSG-YDSSLSA 455
G + +K+F + G P DY + I +C+ + GR L+ +G ++S +
Sbjct: 145 GRELDAIKVFVEFLELGLVPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCV 204
Query: 456 GNALITMYARC-GVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEG 514
G +LI M+ + E A VF+ M ++ V+W MI Q G AI + M+ G
Sbjct: 205 GCSLIDMFVKGENSFENAYKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSG 264
Query: 515 ILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPG--EDHYARFIDLL--CRA-G 569
D+ T +V SAC + G++ +H + I G +D +D+ C A G
Sbjct: 265 FESDKFTLSSVFSACAELENLSLGKQ----LHS-WAIRSGLVDDVECSLVDMYAKCSADG 319
Query: 570 KFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMP--HHAGTYVLL 627
+ + V D + S W AL+ G N +L +A +++ H +
Sbjct: 320 SVDDCRKVFDRME-DHSVMSWTALITG--YMKNCNLATEAINLFSEMITQGHVEPNHFTF 376
Query: 628 SNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYL 687
S+ + G D RV K + + K+ S V N V V +AQ ++ L
Sbjct: 377 SSAFKACGNLSD-PRVGKQVLGQAFKRGLA-SNSSVANSVISMFVKSDRMEDAQRAFESL 434
Query: 688 EQ 689
+
Sbjct: 435 SE 436
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 471 bits (1213), Expect = e-132, Method: Compositional matrix adjust.
Identities = 264/719 (36%), Positives = 393/719 (54%), Gaps = 81/719 (11%)
Query: 85 TTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDD 144
TL+A Y KLA RD V +N ++++ N A+E R+M +
Sbjct: 240 NTLVAMYGKLG--KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEG 297
Query: 145 VKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTS-VLNALISVYVKCVSSPF 203
V+PD FT +SVL A + + E + ++H +K+G+ S V +AL+ +Y C
Sbjct: 298 VEPDEFTISSVLPACSHL-EMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNC----- 351
Query: 204 VSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALI 263
+ L G RRVFD M +R W M+ GY +N++ A GM E+ G+ N+
Sbjct: 352 --KQVLSG--RRVFDGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANST- 406
Query: 264 SGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPV 323
T V+ AC SG F + +H +++
Sbjct: 407 --------------------TMAGVVPACVRSGAFSRKEAIHGFVV-------------- 432
Query: 324 NNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNL 383
K RD F Q N ++ Y G ID A +F M +R+L
Sbjct: 433 ------------KRGLDRDRFVQ---------NTLMDMYSRLGKIDIAMRIFGKMEDRDL 471
Query: 384 LSWTVMISGLAQNGYGEEGLKLFSQMR-LE----------GFKPCDYAFAGAITSCAGLG 432
++W MI+G + + E+ L L +M+ LE KP + SCA L
Sbjct: 472 VTWNTMITGYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALS 531
Query: 433 ALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIA 492
AL G+++HA + + + ++ G+AL+ MYA+CG ++ + VF+ +P + ++WN +I
Sbjct: 532 ALAKGKEIHAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIM 591
Query: 493 ALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIP 552
A G HGNG AI+L M+ +G+ P+ +TF++V +AC+H+G+V EG R F M YG+
Sbjct: 592 AYGMHGNGQEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Query: 553 PGEDHYARFIDLLCRAGKFSEAKDVIDSLPFK-PSAPIWEALLAGCRIHGNIDLGIQAAE 611
P DHYA +DLL RAG+ EA +++ +P A W +LL RIH N+++G AA+
Sbjct: 652 PSSDHYACVVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQ 711
Query: 612 QLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFL 671
L QL P+ A YVLL+N+Y++ G WD A VR+ M+++GV+KEPGCSWIE ++VH F+
Sbjct: 712 NLIQLEPNVASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFV 771
Query: 672 VDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFG 731
D++HP+++ + YLE L MRK GYVPDT VLH++E D+KE L HSEKLA+AFG
Sbjct: 772 AGDSSHPQSEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFG 831
Query: 732 LMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
++ G +RV KNLR+C DCH A KF+SK+V REI++RD +RFH F++G CSCGDYW
Sbjct: 832 ILNTSPGTIIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 158/659 (23%), Positives = 288/659 (43%), Gaps = 108/659 (16%)
Query: 26 RNPITSSLARS---VHAHMISSGFKPREH----IINRLIDIYCKSL-KLVYARTLFDEIP 77
R+ + S+L R + MI G KP + ++ + D+ L K ++A
Sbjct: 70 RSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYG 129
Query: 78 QPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELF 137
+ TL+ Y + ++F++ + R+ V +N++I++ A+E F
Sbjct: 130 VDSVTVANTLVNLYRKCGDFGAVYKVFDR--ISERNQVSWNSLISSLCSFEKWEMALEAF 187
Query: 138 RDMRRDDVKPDNFTFTSVLSALALIVEEEKQCM--QMHCTVVKSGTGLFTSVLNALISVY 195
R M ++V+P +FT SV++A + + E M Q+H ++ G L + ++N L+++Y
Sbjct: 188 RCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGE-LNSFIINTLVAMY 246
Query: 196 VKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENV 255
K SS+ L+G+ RD ++W T+++ +N+ L A E+L
Sbjct: 247 GKL--GKLASSKVLLGS-------FGGRDLVTWNTVLSSLCQNEQLLEALEYL------- 290
Query: 256 GVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKP 315
RE M++ ++ DEFT +SV+ AC++ + R GK++HAY L+ +
Sbjct: 291 -------------RE--MVLEGVEPDEFTISSVLPACSHLEMLRTGKELHAYALKNGSLD 335
Query: 316 TPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLF 375
F V +ALV +Y C +V R +F
Sbjct: 336 ENSF---VGSALVDMYCNCKQVLSGRRVF------------------------------- 361
Query: 376 EAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLE-GFKPCDYAFAGAITSCAGLGAL 434
+ M +R + W MI+G +QN + +E L LF M G AG + +C GA
Sbjct: 362 DGMFDRKIGLWNAMIAGYSQNEHDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAF 421
Query: 435 ENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAA- 493
+H +V G D N L+ MY+R G ++ A +F M + D V+WN MI
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Query: 494 -LGQHGNGA----RAIELYEQMLKEG-----ILPDRITFLTVLSACNHAGLVKEGRR--- 540
+H A ++ E+ + +G + P+ IT +T+L +C + +G+
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 541
Query: 541 YFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIH 600
Y + + G + +D+ + G ++ V D +P K + W ++ +H
Sbjct: 542 YAIKNNLATDVAVG----SALVDMYAKCGCLQMSRKVFDQIPQK-NVITWNVIIMAYGMH 596
Query: 601 GNIDLGIQAAEQLFQLM-----PHHAGTYVLLSNMYANLGRWDDAARVRKLMR-DRGVK 653
GN G +A + L +M P+ T++ + ++ G D+ R+ +M+ D GV+
Sbjct: 597 GN---GQEAIDLLRMMMVQGVKPNEV-TFISVFAACSHSGMVDEGLRIFYVMKPDYGVE 651
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 111/221 (50%), Gaps = 7/221 (3%)
Query: 365 AGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGA 424
A + A S+F + + R+ W ++ ++ E + + M + G KP +YAF
Sbjct: 45 ASAVSGAPSIFIS-QSRSPEWWIDLLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPAL 103
Query: 425 ITSCAGLGALENGRQLHAQLVHSGYD-SSLSAGNALITMYARCGVVEAANCVFNTMPNVD 483
+ + A L +E G+Q+HA + GY S++ N L+ +Y +CG A VF+ + +
Sbjct: 104 LKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCGDFGAVYKVFDRISERN 163
Query: 484 SVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFE 543
VSWN++I++L A+E + ML E + P T ++V++AC++ + EG +
Sbjct: 164 QVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVVTACSNLPM-PEGLMMGK 222
Query: 544 TMHGPYGIPPGEDH---YARFIDLLCRAGKFSEAKDVIDSL 581
+H YG+ GE + + + + GK + +K ++ S
Sbjct: 223 QVHA-YGLRKGELNSFIINTLVAMYGKLGKLASSKVLLGSF 262
Score = 79.3 bits (194), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/334 (22%), Positives = 150/334 (44%), Gaps = 63/334 (18%)
Query: 32 SLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAY 91
S ++H ++ G + N L+D+Y + K+ A +F ++ D+V T+I Y
Sbjct: 422 SRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGY 481
Query: 92 SASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFT 151
S++ + A + +K R S G + + L KP++ T
Sbjct: 482 VFSEHHEDALLLLHKMQNLERKV-------------SKGASRVSL---------KPNSIT 519
Query: 152 FTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMG 211
++L + A + K ++H +K+ +V +AL+ +Y KC +
Sbjct: 520 LMTILPSCAALSALAKG-KEIHAYAIKNNLATDVAVGSALVDMYAKC---------GCLQ 569
Query: 212 AARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHREL 271
+R+VFD++P+++ ++W ++ Y GM N A + L
Sbjct: 570 MSRKVFDQIPQKNVITWNVIIMAY--------------GMHGNGQEAIDL---------L 606
Query: 272 KMLMLR-IQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTL 330
+M+M++ ++ +E T+ SV +AC++SG+ G ++ Y+++ + P S +V L
Sbjct: 607 RMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIF-YVMKPDYGVEP--SSDHYACVVDL 663
Query: 331 YWKCGKVNEARDIFNQMPERDLV---SWNAILSA 361
+ G++ EA + N MP RD +W+++L A
Sbjct: 664 LGRAGRIKEAYQLMNMMP-RDFNKAGAWSSLLGA 696
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 470 bits (1209), Expect = e-131, Method: Compositional matrix adjust.
Identities = 258/762 (33%), Positives = 402/762 (52%), Gaps = 76/762 (9%)
Query: 35 RSVHAHMISSGFKPREHIINRLIDIYCKS--LKLVYARTLFDEIPQPDIVARTTLIAAYS 92
+ H HMI +G + ++L + S L YAR +FDEIP+P+ A
Sbjct: 47 KQTHGHMIRTGTFSDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFA--------- 97
Query: 93 ASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDM-RRDDVKPDNFT 151
+N +I AY+ + +I F DM P+ +T
Sbjct: 98 ------------------------WNTLIRAYASGPDPVLSIWAFLDMVSESQCYPNKYT 133
Query: 152 FTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMG 211
F ++ A A V +H VKS G V N+LI Y C +
Sbjct: 134 FPFLIKAAAE-VSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFSCGD---------LD 183
Query: 212 AARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGM-SENVGVAWNALISGYVHRE 270
+A +VF + E+D +SW +M+ G+V+ D A E M SE+V +
Sbjct: 184 SACKVFTTIKEKDVVSWNSMINGFVQKGSPDKALELFKKMESEDVKAS------------ 231
Query: 271 LKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTL 330
T V+SACA G+QV +Y+ +L + NA++ +
Sbjct: 232 -----------HVTMVGVLSACAKIRNLEFGRQVCSYIEENRVN----VNLTLANAMLDM 276
Query: 331 YWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMI 390
Y KCG + +A+ +F+ M E+D V+W +L Y + + A+ + +M ++++++W +I
Sbjct: 277 YTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALI 336
Query: 391 SGLAQNGYGEEGLKLFSQMRLE-GFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGY 449
S QNG E L +F +++L+ K +++CA +GALE GR +H+ + G
Sbjct: 337 SAYEQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGI 396
Query: 450 DSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQ 509
+ +ALI MY++CG +E + VFN++ D W+AMI L HG G A++++ +
Sbjct: 397 RMNFHVTSALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYK 456
Query: 510 MLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAG 569
M + + P+ +TF V AC+H GLV E F M YGI P E HYA +D+L R+G
Sbjct: 457 MQEANVKPNGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSG 516
Query: 570 KFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSN 629
+A I+++P PS +W ALL C+IH N++L A +L +L P + G +VLLSN
Sbjct: 517 YLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSN 576
Query: 630 MYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQ 689
+YA LG+W++ + +RK MR G+KKEPGCS IE+D +H FL D AHP ++ VY L +
Sbjct: 577 IYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHE 636
Query: 690 LVLEMRKLGYVPDTKFVLHDMESDQ-KEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLR 748
++ +++ GY P+ VL +E ++ KE +L+ HSEKLA+ +GL+ +RV+KNLR
Sbjct: 637 VMEKLKSNGYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLR 696
Query: 749 ICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
+CGDCH+ K +S++ REI+VRD RFHHFR+G+CSC D+W
Sbjct: 697 VCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 115/483 (23%), Positives = 217/483 (44%), Gaps = 102/483 (21%)
Query: 167 KQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDEL 226
+Q Q H ++++GT F+ +A K + +SS + + AR+VFDE+P+ +
Sbjct: 44 RQLKQTHGHMIRTGT--FSDPYSA-----SKLFAMAALSSFASLEYARKVFDEIPKPNSF 96
Query: 227 SWTTMMTGYVKN-DYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTY 285
+W T++ Y D + + FLD +SE+ + +++T+
Sbjct: 97 AWNTLIRAYASGPDPVLSIWAFLDMVSES----------------------QCYPNKYTF 134
Query: 286 TSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFN 345
+I A A LG+ +H +++ + V N+L+ Y+ CG ++ A +F
Sbjct: 135 PFLIKAAAEVSSLSLGQSLHGMAVKSAVGS----DVFVANSLIHCYFSCGDLDSACKVFT 190
Query: 346 QMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKL 405
+ E+D+VSWN++++ +V G D+A L+L
Sbjct: 191 TIKEKDVVSWNSMINGFVQKGSPDKA-------------------------------LEL 219
Query: 406 FSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYAR 465
F +M E K G +++CA + LE GRQ+ + + + + +L+ NA++ MY +
Sbjct: 220 FKKMESEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTK 279
Query: 466 CGVV-------------------------------EAANCVFNTMPNVDSVSWNAMIAAL 494
CG + EAA V N+MP D V+WNA+I+A
Sbjct: 280 CGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAY 339
Query: 495 GQHGNGARA-IELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPP 553
Q+G A I +E L++ + ++IT ++ LSAC G ++ G R+ + +GI
Sbjct: 340 EQNGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELG-RWIHSYIKKHGIRM 398
Query: 554 GEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQL 613
+ I + + G ++++V +S+ K +W A++ G +HG G +A +
Sbjct: 399 NFHVTSALIHMYSKCGDLEKSREVFNSVE-KRDVFVWSAMIGGLAMHG---CGNEAVDMF 454
Query: 614 FQL 616
+++
Sbjct: 455 YKM 457
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 61/143 (42%), Gaps = 36/143 (25%)
Query: 33 LARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYS 92
L R +H+++ G + H+ + LI +Y K L +R +F+ + +
Sbjct: 383 LGRWIHSYIKKHGIRMNFHVTSALIHMYSKCGDLEKSREVFNSVEK-------------- 428
Query: 93 ASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTF 152
RD ++AMI + + G+ A+++F M+ +VKP+ TF
Sbjct: 429 -------------------RDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTF 469
Query: 153 TSVLSALA---LIVEEEKQCMQM 172
T+V A + L+ E E QM
Sbjct: 470 TNVFCACSHTGLVDEAESLFHQM 492
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 469 bits (1208), Expect = e-131, Method: Compositional matrix adjust.
Identities = 275/770 (35%), Positives = 418/770 (54%), Gaps = 92/770 (11%)
Query: 35 RSVHAHMISSGFKPREHIINRLIDIYCKSLK---LVYARTLFDEIPQPDIVARTTLIAAY 91
R +HA MI G + +++LI+ S L YA ++F I +P+++
Sbjct: 50 RIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTIQEPNLL--------- 100
Query: 92 SASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFT 151
+N M ++ +S+ +A++L+ M + P+++T
Sbjct: 101 ------------------------IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYT 136
Query: 152 FTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMG 211
F VL + A + K+ Q+H V+K G L V +LIS+YV+ +
Sbjct: 137 FPFVLKSCAK-SKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ---------NGRLE 186
Query: 212 AARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHR-- 269
A +VFD+ P RD +S+T ++ GY Y++ A++ D + V+WNA+ISGY
Sbjct: 187 DAHKVFDKSPHRDVVSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGN 246
Query: 270 -----EL--KMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLP 322
EL M+ ++ DE T +V+SACA SG LG+QVH ++ +L
Sbjct: 247 YKEALELFKDMMKTNVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGS----NLK 302
Query: 323 VNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERN 382
+ NAL+ LY KCG+ ++ A LFE + ++
Sbjct: 303 IVNALIDLYSKCGE-------------------------------LETACGLFERLPYKD 331
Query: 383 LLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHA 442
++SW +I G +E L LF +M G P D + +CA LGA++ GR +H
Sbjct: 332 VISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 391
Query: 443 QLVH--SGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNG 500
+ G ++ S +LI MYA+CG +EAA+ VFN++ + SWNAMI HG
Sbjct: 392 YIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRA 451
Query: 501 ARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYAR 560
+ +L+ +M K GI PD ITF+ +LSAC+H+G++ GR F TM Y + P +HY
Sbjct: 452 DASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGC 511
Query: 561 FIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHH 620
IDLL +G F EA+++I+ + +P IW +LL C++HGN++LG AE L ++ P +
Sbjct: 512 MIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 571
Query: 621 AGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEA 680
G+YVLLSN+YA+ GRW++ A+ R L+ D+G+KK PGCS IE+D+ VH F++ D HP
Sbjct: 572 PGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRN 631
Query: 681 QAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGAT 740
+ +Y LE++ + + K G+VPDT VL +ME + KE AL HSEKLA+AFGL+ G
Sbjct: 632 REIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTK 691
Query: 741 VRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
+ ++KNLR+C +CH A K +SK+ REI+ RD RFHHFRDG CSC DYW
Sbjct: 692 LTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/454 (26%), Positives = 184/454 (40%), Gaps = 78/454 (17%)
Query: 317 PEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDE------ 370
P + N+ ++L C + R I QM + L + N LS + ++
Sbjct: 26 PPYDSIRNHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLP 85
Query: 371 -AKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCA 429
A S+F+ ++E NLL W M G A + LKL+ M G P Y F + SCA
Sbjct: 86 YAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA 145
Query: 430 GLGALENGRQLHAQLVHSGYDSSLSAGNALITM--------------------------- 462
A + G+Q+H ++ G D L +LI+M
Sbjct: 146 KSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTA 205
Query: 463 ----YARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPD 518
YA G +E A +F+ +P D VSWNAMI+ + GN A+EL++ M+K + PD
Sbjct: 206 LIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPD 265
Query: 519 RITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVI 578
T +TV+SAC +G ++ GR+ + +G IDL + G+ A +
Sbjct: 266 ESTMVTVVSACAQSGSIELGRQVHLWI-DDHGFGSNLKIVNALIDLYSKCGELETACGLF 324
Query: 579 DSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGT---YVLLSNMYA--- 632
+ LP+K W L+ G H N+ + A LFQ M T +LS + A
Sbjct: 325 ERLPYKDVIS-WNTLIGG-YTHMNL---YKEALLLFQEMLRSGETPNDVTMLSILPACAH 379
Query: 633 ----NLGRWDDAARVRKL--------MRDRGVKKEPGCSWIEVDNKV------------H 668
++GRW ++L +R + C IE ++V +
Sbjct: 380 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWN 439
Query: 669 VFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPD 702
+ H A A + L MRK+G PD
Sbjct: 440 AMIFGFAMHGRADASF----DLFSRMRKIGIQPD 469
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/288 (23%), Positives = 122/288 (42%), Gaps = 66/288 (22%)
Query: 33 LARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYS 92
L R VH + GF I+N LID+Y K +L A LF+ +P D+++ TLI Y+
Sbjct: 284 LGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVISWNTLIGGYT 343
Query: 93 ASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTF 152
++ L +E A+ LF++M R P++ T
Sbjct: 344 ---HMNLYKE------------------------------ALLLFQEMLRSGETPNDVTM 370
Query: 153 TSVLSALA-LIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMG 211
S+L A A L + + + ++ G +S+ +LI +Y KC +
Sbjct: 371 LSILPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGD---------IE 421
Query: 212 AARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHREL 271
AA +VF+ + + SW M+ G+ + DA+ +
Sbjct: 422 AAHQVFNSILHKSLSSWNAMIFGFAMHGRADASFDLFS---------------------- 459
Query: 272 KMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEF 319
+M + IQ D+ T+ ++SAC++SG+ LG+ + + + + K TP+
Sbjct: 460 RMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQ-DYKMTPKL 506
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 468 bits (1205), Expect = e-131, Method: Compositional matrix adjust.
Identities = 264/757 (34%), Positives = 398/757 (52%), Gaps = 103/757 (13%)
Query: 37 VHAHMISSGF--KPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSAS 94
VHA + GF P + N L+ YC+ +L A LF+EIP+
Sbjct: 169 VHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPE---------------- 212
Query: 95 DNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTS 154
+D+V +N +IT Y + +I LF MR+ +P +FTF+
Sbjct: 213 -----------------KDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSG 255
Query: 155 VLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAAR 214
VL A+ + + + Q+H V +G SV N ++ Y K R L R
Sbjct: 256 VLKAV-VGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK-------HDRVL--ETR 305
Query: 215 RVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKML 274
+FDEMPE D +S+ +++ Y + D +A+ F M G+ R
Sbjct: 306 MLFDEMPELDFVSYNVVISSYSQADQYEASLHFFREMQ----------CMGFDRRN---- 351
Query: 275 MLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKC 334
F + +++S AN ++G+Q+H L A L V N+LV +Y KC
Sbjct: 352 --------FPFATMLSIAANLSSLQMGRQLHCQALLATADSI----LHVGNSLVDMYAKC 399
Query: 335 GKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLA 394
+ +EA+ +F+++ +R +SWT +ISG
Sbjct: 400 E-------------------------------MFEEAELIFKSLPQRTTVSWTALISGYV 428
Query: 395 QNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLS 454
Q G GLKLF++MR + FA + + A +L G+QLHA ++ SG ++
Sbjct: 429 QKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF 488
Query: 455 AGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEG 514
+G+ L+ MYA+CG ++ A VF MP+ ++VSWNA+I+A +G+G AI + +M++ G
Sbjct: 489 SGSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESG 548
Query: 515 ILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEA 574
+ PD ++ L VL+AC+H G V++G YF+ M YGI P + HYA +DLL R G+F+EA
Sbjct: 549 LQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEA 608
Query: 575 KDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMP-HHAGTYVLLSNMYAN 633
+ ++D +PF+P +W ++L CRIH N L +AAE+LF + A YV +SN+YA
Sbjct: 609 EKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAA 668
Query: 634 LGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLE 693
G W+ V+K MR+RG+KK P SW+EV++K+HVF +D HP + + + +L E
Sbjct: 669 AGEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAE 728
Query: 694 MRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDC 753
+ + GY PDT V+ D++ K +L HSE+LAVAF L+ P G + V+KNLR C DC
Sbjct: 729 IEREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDC 788
Query: 754 HNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
H A K +SK+V REI VRD RFHHF +G CSCGDYW
Sbjct: 789 HAAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 209 bits (531), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 169/628 (26%), Positives = 288/628 (45%), Gaps = 104/628 (16%)
Query: 5 NADYIRTLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSL 64
N++ +R+ A+ QL P +P T R V A +I +GF N +++ +
Sbjct: 6 NSNEVRS--RTLATLRQLRQP-SPATFLDTRRVDARIIKTGFDTDTCRSNFIVEDLLRRG 62
Query: 65 KLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAY 124
++ AR ++DE+P + V+ T+I+ + + +V AR++F+ P R V + ++ Y
Sbjct: 63 QVSAARKVYDEMPHKNTVSTNTMISGHVKTGDVSSARDLFDAMP--DRTVVTWTILMGWY 120
Query: 125 SHNSNGHAAIELFRDMRRDD--VKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSG-- 180
+ NS+ A +LFR M R PD+ TFT++L V + Q+H VK G
Sbjct: 121 ARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLPGCNDAV-PQNAVGQVHAFAVKLGFD 179
Query: 181 TGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDY 240
T F +V N L+ Y + + A +F+E+PE+D +++ T++TGY K
Sbjct: 180 TNPFLTVSNVLLKSYCEV---------RRLDLACVLFEEIPEKDSVTFNTLITGYEK--- 227
Query: 241 LDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRL 300
+ L + +H LKM Q +FT++ V+ A F L
Sbjct: 228 -------------------DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFAL 268
Query: 301 GKQVHAYLLRTEAKPTPEFS--LPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAI 358
G+Q+HA + T FS V N ++ Y K +V E R +F++MPE D VS+N +
Sbjct: 269 GQQLHALSV------TTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVV 322
Query: 359 LSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCD 418
+S+Y +Q E L F +M+ GF +
Sbjct: 323 ISSY-------------------------------SQADQYEASLHFFREMQCMGFDRRN 351
Query: 419 YAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNT 478
+ FA ++ A L +L+ GRQLH Q + + DS L GN+L+ MYA+C + E A +F +
Sbjct: 352 FPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKS 411
Query: 479 MPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACN-------- 530
+P +VSW A+I+ Q G ++L+ +M + D+ TF TVL A
Sbjct: 412 LPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLG 471
Query: 531 ---HAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSA 587
HA +++ G E + G+ +D+ + G +A V + +P + +A
Sbjct: 472 KQLHAFIIRSGN--LENVFSGSGL----------VDMYAKCGSIKDAVQVFEEMPDR-NA 518
Query: 588 PIWEALLAGCRIHGNIDLGIQAAEQLFQ 615
W AL++ +G+ + I A ++ +
Sbjct: 519 VSWNALISAHADNGDGEAAIGAFAKMIE 546
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 87/210 (41%), Gaps = 57/210 (27%)
Query: 33 LARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYS 92
L + +HA +I SG + L+D+Y K + A +F+E+P
Sbjct: 470 LGKQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD-------------- 515
Query: 93 ASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTF 152
R+ V +NA+I+A++ N +G AAI F M ++PD+ +
Sbjct: 516 -------------------RNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSI 556
Query: 153 TSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVY-VKCVSSPFVSSRSLMG 211
VL+A + HC V+ GT F A+ +Y + + L+G
Sbjct: 557 LGVLTACS------------HCGFVEQGTEYF----QAMSPIYGITPKKKHYACMLDLLG 600
Query: 212 ------AARRVFDEMP-ERDELSWTTMMTG 234
A ++ DEMP E DE+ W++++
Sbjct: 601 RNGRFAEAEKLMDEMPFEPDEIMWSSVLNA 630
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 238/623 (38%), Positives = 351/623 (56%), Gaps = 68/623 (10%)
Query: 210 MGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHR 269
+ +AR+VFDE+PER+ + M+ YV N + E V V
Sbjct: 90 VASARKVFDEIPERNVIIINVMIRSYVNNGFY----------GEGVKVFGT--------- 130
Query: 270 ELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVT 329
M ++ D +T+ V+ AC+ SG +G+++H + T L V N LV+
Sbjct: 131 ---MCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST----LFVGNGLVS 183
Query: 330 LYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEA------------------ 371
+Y KCG ++EAR + ++M RD+VSWN+++ Y D+A
Sbjct: 184 MYGKCGFLSEARLVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGT 243
Query: 372 -------------------KSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLE 412
K +F M +++L+SW VMI +N E ++L+S+M +
Sbjct: 244 MASLLPAVSNTTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEAD 303
Query: 413 GFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAA 472
GF+P + + +C AL G+++H + +L NALI MYA+CG +E A
Sbjct: 304 GFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKCGCLEKA 363
Query: 473 NCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHA 532
VF M + D VSW AMI+A G G G A+ L+ ++ G++PD I F+T L+AC+HA
Sbjct: 364 RDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHA 423
Query: 533 GLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEA 592
GL++EGR F+ M Y I P +H A +DLL RAGK EA I + +P+ +W A
Sbjct: 424 GLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGA 483
Query: 593 LLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGV 652
LL CR+H + D+G+ AA++LFQL P +G YVLLSN+YA GRW++ +R +M+ +G+
Sbjct: 484 LLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGL 543
Query: 653 KKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMES 712
KK PG S +EV+ +H FLV D +HP++ +Y+ L+ LV +M++LGYVPD++ LHD+E
Sbjct: 544 KKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYVPDSESALHDVEE 603
Query: 713 DQKEYALSTHSEKLAVAFGLMKLP-----GGATVRVLKNLRICGDCHNAFKFMSKVVGRE 767
+ KE L+ HSEKLA+ F LM T+R+ KNLRICGDCH A K +S++ RE
Sbjct: 604 EDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHVAAKLISQITSRE 663
Query: 768 IVVRDGKRFHHFRDGKCSCGDYW 790
I++RD RFH FR G CSCGDYW
Sbjct: 664 IIIRDTNRFHVFRFGVCSCGDYW 686
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 138/537 (25%), Positives = 237/537 (44%), Gaps = 112/537 (20%)
Query: 48 PREHI--INRLIDIY--CKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREM 103
P+E + + +++D Y ++L+ V++R + +++ + L+ AY++ +V AR++
Sbjct: 38 PQETVFLLGQVLDTYPDIRTLRTVHSRIILEDLRCNSSLG-VKLMRAYASLKDVASARKV 96
Query: 104 FNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALAL-- 161
F++ P R+ + N MI +Y +N +++F M +V+PD++TF VL A +
Sbjct: 97 FDEIP--ERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSG 154
Query: 162 -IVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEM 220
IV K +H + K G V N L+S+Y KC + AR V DEM
Sbjct: 155 TIVIGRK----IHGSATKVGLSSTLFVGNGLVSMYGKC---------GFLSEARLVLDEM 201
Query: 221 PERDELSWTTMMTGYVKNDYLDAAREFLDGM-----------------------SENVG- 256
RD +SW +++ GY +N D A E M +ENV
Sbjct: 202 SRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMY 261
Query: 257 -------------VAWNALISGYVHRELKM----LMLRIQLDEF-----TYTSVISACAN 294
V+WN +I Y+ + + L R++ D F + TSV+ AC +
Sbjct: 262 VKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGD 321
Query: 295 SGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVS 354
+ LGK++H Y+ R + P +L + NAL+ +Y KCG + +ARD+F M RD+VS
Sbjct: 322 TSALSLGKKIHGYIERKKLIP----NLLLENALIDMYAKCGCLEKARDVFENMKSRDVVS 377
Query: 355 WNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGF 414
W A++SAY +G G + + LFS+++ G
Sbjct: 378 WTAMISAY-------------------------------GFSGRGCDAVALFSKLQDSGL 406
Query: 415 KPCDYAFAGAITSCAGLGALENGRQLHAQLV-HSGYDSSLSAGNALITMYARCGVVEAAN 473
P AF + +C+ G LE GR + H L ++ + R G V+ A
Sbjct: 407 VPDSIAFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAY 466
Query: 474 CVFNTM---PNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLS 527
M PN W A++ A H + + +++ + + P++ + +LS
Sbjct: 467 RFIQDMSMEPN--ERVWGALLGACRVHSDTDIGLLAADKLFQ--LAPEQSGYYVLLS 519
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/305 (25%), Positives = 134/305 (43%), Gaps = 19/305 (6%)
Query: 358 ILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPC 417
++ AY S + A+ +F+ + ERN++ VMI NG+ EG+K+F M +P
Sbjct: 80 LMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPD 139
Query: 418 DYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFN 477
Y F + +C+ G + GR++H G S+L GN L++MY +CG + A V +
Sbjct: 140 HYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLD 199
Query: 478 TMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAG---- 533
M D VSWN+++ Q+ A+E+ +M I D T ++L A ++
Sbjct: 200 EMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV 259
Query: 534 ------LVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSA 587
K G++ + + G+ ++L R D + P+
Sbjct: 260 MYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPAC 319
Query: 588 PIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLM 647
AL G +IHG I+ +L+P+ L+ +MYA G + A V + M
Sbjct: 320 GDTSALSLGKKIHGYIERK--------KLIPNLLLENALI-DMYAKCGCLEKARDVFENM 370
Query: 648 RDRGV 652
+ R V
Sbjct: 371 KSRDV 375
Score = 85.1 bits (209), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 109/436 (25%), Positives = 174/436 (39%), Gaps = 96/436 (22%)
Query: 30 TSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIA 89
T + R +H G + N L+ +Y K L AR + DE+ + D+V+ +L+
Sbjct: 155 TIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVV 214
Query: 90 AY-------------------------------------SASDNVKLAREMFNKTPLKMR 112
Y + ++NV ++MF K + +
Sbjct: 215 GYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENVMYVKDMFFK--MGKK 272
Query: 113 DTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVL------SALALIVEEE 166
V +N MI Y N+ A+EL+ M D +PD + TSVL SAL+L
Sbjct: 273 SLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVLPACGDTSALSL----- 327
Query: 167 KQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDEL 226
++H + + + NALI +Y KC + AR VF+ M RD +
Sbjct: 328 --GKKIHGYIERKKLIPNLLLENALIDMYAKC---------GCLEKARDVFENMKSRDVV 376
Query: 227 SWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYT 286
SWT M++ Y G S G AL S K+ + D +
Sbjct: 377 SWTAMISAY--------------GFSGR-GCDAVALFS-------KLQDSGLVPDSIAFV 414
Query: 287 SVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQ 346
+ ++AC+++GL G+ L+ K TP L +V L + GKV EA
Sbjct: 415 TTLAACSHAGLLEEGRSCFK-LMTDHYKITPR--LEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 347 MP-ERDLVSWNAILSAY-----VSAGLIDEAKSLFEAMRERNLLSWTVMISGL-AQNGYG 399
M E + W A+L A GL+ A LF+ E++ + V++S + A+ G
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLL-AADKLFQLAPEQS--GYYVLLSNIYAKAGRW 528
Query: 400 EEGLKLFSQMRLEGFK 415
EE + + M+ +G K
Sbjct: 529 EEVTNIRNIMKSKGLK 544
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 86/190 (45%), Gaps = 9/190 (4%)
Query: 438 RQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQH 497
R +H++++ + S G L+ YA V +A VF+ +P + + N MI + +
Sbjct: 59 RTVHSRIILEDLRCNSSLGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNN 118
Query: 498 GNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGP---YGIPPG 554
G ++++ M + PD TF VL AC+ +G + GR+ +HG G+
Sbjct: 119 GFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRK----IHGSATKVGLSST 174
Query: 555 EDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLF 614
+ + + G SEA+ V+D + + W +L+ G + D ++ ++
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVS-WNSLVVGYAQNQRFDDALEVCREME 233
Query: 615 QL-MPHHAGT 623
+ + H AGT
Sbjct: 234 SVKISHDAGT 243
>sp|Q9SIT7|PP151_ARATH Pentatricopeptide repeat-containing protein At2g13600
OS=Arabidopsis thaliana GN=PCMP-E76 PE=3 SV=1
Length = 697
Score = 465 bits (1197), Expect = e-130, Method: Compositional matrix adjust.
Identities = 255/691 (36%), Positives = 386/691 (55%), Gaps = 44/691 (6%)
Query: 11 TLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYAR 70
T ++ +A L C ++ +++ R VHA +I SGF I NRLID Y K L R
Sbjct: 17 TDSSPFAKLLDSC-IKSKLSAIYVRYVHASVIKSGFSNEIFIQNRLIDAYSKCGSLEDGR 75
Query: 71 TLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNG 130
+FD++PQ +I +++ + + A +F P RD +N+M++ ++ +
Sbjct: 76 QVFDKMPQRNIYTWNSVVTGLTKLGFLDEADSLFRSMP--ERDQCTWNSMVSGFAQHDRC 133
Query: 131 HAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNA 190
A+ F M ++ + ++F SVLSA + + + K +Q+H + KS + +A
Sbjct: 134 EEALCYFAMMHKEGFVLNEYSFASVLSACSGLNDMNKG-VQVHSLIAKSPFLSDVYIGSA 192
Query: 191 LISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDG 250
L+ +Y KC + + A+RVFDEM +R+ +SW +++T + +N A E LD
Sbjct: 193 LVDMYSKCGN---------VNDAQRVFDEMGDRNVVSWNSLITCFEQNG---PAVEALDV 240
Query: 251 MSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLR 310
ML R++ DE T SVISACA+ ++G++VH +++
Sbjct: 241 FQ-------------------MMLESRVEPDEVTLASVISACASLSAIKVGQEVHGRVVK 281
Query: 311 TEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDE 370
+ + ++NA V +Y KC ++ EAR IF+ MP R++++ +++S Y A
Sbjct: 282 NDKLRN---DIILSNAFVDMYAKCSRIKEARFIFDSMPIRNVIAETSMISGYAMAASTKA 338
Query: 371 AKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAG 430
A+ +F M ERN++SW +I+G QNG EE L LF ++ E P Y+FA + +CA
Sbjct: 339 ARLMFTKMAERNVVSWNALIAGYTQNGENEEALSLFCLLKRESVCPTHYSFANILKACAD 398
Query: 431 LGALENGRQLHAQLV------HSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDS 484
L L G Q H ++ SG + + GN+LI MY +CG VE VF M D
Sbjct: 399 LAELHLGMQAHVHVLKHGFKFQSGEEDDIFVGNSLIDMYVKCGCVEEGYLVFRKMMERDC 458
Query: 485 VSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFET 544
VSWNAMI Q+G G A+EL+ +ML+ G PD IT + VLSAC HAG V+EGR YF +
Sbjct: 459 VSWNAMIIGFAQNGYGNEALELFREMLESGEKPDHITMIGVLSACGHAGFVEEGRHYFSS 518
Query: 545 MHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNID 604
M +G+ P DHY +DLL RAG EAK +I+ +P +P + IW +LLA C++H NI
Sbjct: 519 MTRDFGVAPLRDHYTCMVDLLGRAGFLEEAKSMIEEMPMQPDSVIWGSLLAACKVHRNIT 578
Query: 605 LGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVD 664
LG AE+L ++ P ++G YVLLSNMYA LG+W+D VRK MR GV K+PGCSWI++
Sbjct: 579 LGKYVAEKLLEVEPSNSGPYVLLSNMYAELGKWEDVMNVRKSMRKEGVTKQPGCSWIKIQ 638
Query: 665 NKVHVFLVDDTAHPEAQAVYKYLEQLVLEMR 695
HVF+V D +HP + ++ L+ L+ EMR
Sbjct: 639 GHDHVFMVKDKSHPRKKQIHSLLDILIAEMR 669
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 276/763 (36%), Positives = 421/763 (55%), Gaps = 105/763 (13%)
Query: 34 ARSVHAHMISSGFKP-REHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYS 92
R VH H+I++G I N L+++Y K + AR +F Y
Sbjct: 332 GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVF-----------------YF 374
Query: 93 ASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTF 152
+D +D+V +N+MIT N A+E ++ MRR D+ P +FT
Sbjct: 375 MTD----------------KDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTL 418
Query: 153 TSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGA 212
S LS+ A + + K Q+H +K G L SV NAL+++Y + +
Sbjct: 419 ISSLSSCASL-KWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE---------TGYLNE 468
Query: 213 ARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELK 272
R++F MPE D++SW +++ +++ + E V NA +G
Sbjct: 469 CRKIFSSMPEHDQVSWNSIIGALARSE---------RSLPEAVVCFLNAQRAGQ------ 513
Query: 273 MLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYW 332
+L+ T++SV+SA ++ LGKQ+H L+ NAL+ Y
Sbjct: 514 ------KLNRITFSSVLSAVSSLSFGELGKQIHGLALKNNIADEA----TTENALIACYG 563
Query: 333 KCGKVNEARDIFNQMPE-RDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMIS 391
KCG+++ IF++M E RD V+WN+++S Y+ L+ +A L W ++ +
Sbjct: 564 KCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNELLAKALDLV----------WFMLQT 613
Query: 392 GLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDS 451
G RL+ F +A +++ A + LE G ++HA V + +S
Sbjct: 614 G----------------QRLDSF-----MYATVLSAFASVATLERGMEVHACSVRACLES 652
Query: 452 SLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQML 511
+ G+AL+ MY++CG ++ A FNTMP +S SWN+MI+ +HG G A++L+E M
Sbjct: 653 DVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 512 KEG-ILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGK 570
+G PD +TF+ VLSAC+HAGL++EG ++FE+M YG+ P +H++ D+L RAG+
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGE 772
Query: 571 FSEAKDVIDSLPFKPSAPIWEALL-AGCRIHG-NIDLGIQAAEQLFQLMPHHAGTYVLLS 628
+ +D I+ +P KP+ IW +L A CR +G +LG +AAE LFQL P +A YVLL
Sbjct: 773 LDKLEDFIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLG 832
Query: 629 NMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLE 688
NMYA GRW+D + RK M+D VKKE G SW+ + + VH+F+ D +HP+A +YK L+
Sbjct: 833 NMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLK 892
Query: 689 QLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGL-MKLPGGATVRVLKNL 747
+L +MR GYVP T F L+D+E + KE LS HSEKLAVAF L + +R++KNL
Sbjct: 893 ELNRKMRDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNL 952
Query: 748 RICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
R+CGDCH+AFK++SK+ GR+I++RD RFHHF+DG CSC D+W
Sbjct: 953 RVCGDCHSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 127/518 (24%), Positives = 228/518 (44%), Gaps = 103/518 (19%)
Query: 12 LANRYA--SQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLV-Y 68
+N+YA S L+ C + R +H M + + N LI +Y K + V Y
Sbjct: 99 FSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGY 158
Query: 69 ARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNS 128
A F +I +++++V +N++I+ YS
Sbjct: 159 ALCAFGDI---------------------------------EVKNSVSWNSIISVYSQAG 185
Query: 129 NGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCM-QMHCTVVKSG--TGLFT 185
+ +A +F M+ D +P +TF S+++ + E + + + Q+ CT+ KSG T LF
Sbjct: 186 DQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF- 244
Query: 186 SVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAR 245
V + L+S + K S + AR+VF++M R+ ++ +M G V+ + + A
Sbjct: 245 -VGSGLVSAFAKSGSLSY---------ARKVFNQMETRNAVTLNGLMVGLVRQKWGEEAT 294
Query: 246 EFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVH 305
+ M+ + V+ + + I L F S+ + G++VH
Sbjct: 295 KLFMDMNSMIDVSPESYV--------------ILLSSFPEYSLAEEVG----LKKGREVH 336
Query: 306 AYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSA 365
+++ T +F + + N LV +Y KCG + +AR +F M ++D VSWN++++
Sbjct: 337 GHVITT---GLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMIT----- 388
Query: 366 GLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAI 425
GL QNG E ++ + MR P + ++
Sbjct: 389 --------------------------GLDQNGCFIEAVERYKSMRRHDILPGSFTLISSL 422
Query: 426 TSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSV 485
+SCA L + G+Q+H + + G D ++S NAL+T+YA G + +F++MP D V
Sbjct: 423 SSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMPEHDQV 482
Query: 486 SWNAMIAALGQHGNG-ARAIELYEQMLKEGILPDRITF 522
SWN++I AL + A+ + + G +RITF
Sbjct: 483 SWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 134/522 (25%), Positives = 226/522 (43%), Gaps = 82/522 (15%)
Query: 72 LFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGH 131
L+ D+ LI AY + + AR++F++ PL R+ V + +++ YS N
Sbjct: 27 LYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPL--RNCVSWACIVSGYSRNGEHK 84
Query: 132 AAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQ-CMQMHCTVVKSGTGLFTSVLNA 190
A+ RDM ++ + + + F SVL A I Q+H + K + V N
Sbjct: 85 EALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNV 144
Query: 191 LISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDG 250
LIS+Y KC+ S +G A F ++ ++ +SW ++++ Y + +A
Sbjct: 145 LISMYWKCIGS--------VGYALCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSS 196
Query: 251 MSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVI-SACA-NSGLFRLGKQVHAYL 308
M + + E+T+ S++ +AC+ RL +Q+
Sbjct: 197 MQYDGS----------------------RPTEYTFGSLVTTACSLTEPDVRLLEQI---- 230
Query: 309 LRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLI 368
+ T K L V + LV+ + K G ++ AR +FNQM R+ V+ N ++ V
Sbjct: 231 MCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWG 290
Query: 369 DEAKSLF---EAMRERNLLSWTVMISGLAQNGYGEE-GLKLFSQMRLEGFKPCDYAFAGA 424
+EA LF +M + + S+ +++S + EE GLK
Sbjct: 291 EEATKLFMDMNSMIDVSPESYVILLSSFPEYSLAEEVGLK-------------------- 330
Query: 425 ITSCAGLGALENGRQLHAQLVHSGY-DSSLSAGNALITMYARCGVVEAANCVFNTMPNVD 483
GR++H ++ +G D + GN L+ MYA+CG + A VF M + D
Sbjct: 331 -----------KGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFYFMTDKD 379
Query: 484 SVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFE 543
SVSWN+MI L Q+G A+E Y+ M + ILP T ++ LS+C K G++
Sbjct: 380 SVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISSLSSCASLKWAKLGQQ--- 436
Query: 544 TMHG---PYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLP 582
+HG GI + L G +E + + S+P
Sbjct: 437 -IHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSMP 477
Score = 112 bits (279), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 192/438 (43%), Gaps = 88/438 (20%)
Query: 212 AARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHREL 271
+AR+VFDEMP R+ +SW +++GY +N A FL M + G+ N
Sbjct: 54 SARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKE-GIFSN----------- 101
Query: 272 KMLMLRIQLDEFTYTSVISACANSGLFRL--GKQVHAYLLRTEAKPTPEFSLPVNNALVT 329
++ + SV+ AC G + G+Q+H + K + V+N L++
Sbjct: 102 ----------QYAFVSVLRACQEIGSVGILFGRQIHGLMF----KLSYAVDAVVSNVLIS 147
Query: 330 LYWKC-GKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTV 388
+YWKC G V A F + ++ VSWN+I+S Y AG + +S F
Sbjct: 148 MYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQAG---DQRSAF------------- 191
Query: 389 MISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGA--LENGRQLHAQLVH 446
++FS M+ +G +P +Y F +T+ L + Q+ +
Sbjct: 192 ---------------RIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQK 236
Query: 447 SGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIEL 506
SG + L G+ L++ +A+ G + A VFN M ++V+ N ++ L + G A +L
Sbjct: 237 SGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWGEEATKL 296
Query: 507 YEQMLKE-GILPDRITFLTVLSACNHAGLVKE-GRRYFETMHGP----------YGIPPG 554
+ M + P+ +++ +LS+ L +E G + +HG GI G
Sbjct: 297 FMDMNSMIDVSPE--SYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNG 354
Query: 555 EDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLF 614
+++ + G ++A+ V + K S W +++ G +G I+A E+
Sbjct: 355 ------LVNMYAKCGSIADARRVFYFMTDKDSVS-WNSMITGLDQNGCF---IEAVERYK 404
Query: 615 QLMPHH--AGTYVLLSNM 630
+ H G++ L+S++
Sbjct: 405 SMRRHDILPGSFTLISSL 422
Score = 59.7 bits (143), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 60/124 (48%), Gaps = 6/124 (4%)
Query: 425 ITSCAG-LGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVD 483
+ SC G GA R H++L + D + N LI Y G +A VF+ MP +
Sbjct: 10 VQSCVGHRGA---ARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRN 66
Query: 484 SVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFE 543
VSW +++ ++G A+ M+KEGI ++ F++VL AC G V G +
Sbjct: 67 CVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV--GILFGR 124
Query: 544 TMHG 547
+HG
Sbjct: 125 QIHG 128
>sp|O23169|PP353_ARATH Pentatricopeptide repeat-containing protein At4g37170
OS=Arabidopsis thaliana GN=PCMP-H5 PE=3 SV=1
Length = 691
Score = 465 bits (1196), Expect = e-130, Method: Compositional matrix adjust.
Identities = 240/657 (36%), Positives = 372/657 (56%), Gaps = 59/657 (8%)
Query: 146 KPDNFTFTSVLSALALI--VEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPF 203
KP T+ +++ + +EE K+ +H + SG + N L+ +Y KC S
Sbjct: 82 KPPASTYCNLIQVCSQTRALEEGKK---VHEHIRTSGFVPGIVIWNRLLRMYAKCGS--- 135
Query: 204 VSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALI 263
+ AR+VFDEMP RD SW M+ GY + L+ AR+ D M+E +W A++
Sbjct: 136 ------LVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYSWTAMV 189
Query: 264 SGYVHRE-------LKMLMLRI---QLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEA 313
+GYV ++ L LM R+ + + FT + ++A A R GK++H +++R
Sbjct: 190 TGYVKKDQPEEALVLYSLMQRVPNSRPNIFTVSIAVAAAAAVKCIRRGKEIHGHIVRAGL 249
Query: 314 KPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKS 373
+ D V W++++ Y G IDEA++
Sbjct: 250 -----------------------------------DSDEVLWSSLMDMYGKCGCIDEARN 274
Query: 374 LFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGA 433
+F+ + E++++SWT MI ++ EG LFS++ +P +Y FAG + +CA L
Sbjct: 275 IFDKIVEKDVVSWTSMIDRYFKSSRWREGFSLFSELVGSCERPNEYTFAGVLNACADLTT 334
Query: 434 LENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAA 493
E G+Q+H + G+D A ++L+ MY +CG +E+A V + P D VSW ++I
Sbjct: 335 EELGKQVHGYMTRVGFDPYSFASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSWTSLIGG 394
Query: 494 LGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPP 553
Q+G A++ ++ +LK G PD +TF+ VLSAC HAGLV++G +F ++ + +
Sbjct: 395 CAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHAGLVEKGLEFFYSITEKHRLSH 454
Query: 554 GEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQL 613
DHY +DLL R+G+F + K VI +P KPS +W ++L GC +GNIDL +AA++L
Sbjct: 455 TSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWASVLGGCSTYGNIDLAEEAAQEL 514
Query: 614 FQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVD 673
F++ P + TYV ++N+YA G+W++ ++RK M++ GV K PG SW E+ K HVF+
Sbjct: 515 FKIEPENPVTYVTMANIYAAAGKWEEEGKMRKRMQEIGVTKRPGSSWTEIKRKRHVFIAA 574
Query: 674 DTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLM 733
DT+HP + ++L +L +M++ GYVP T VLHD+E +QKE L HSEKLAVAF ++
Sbjct: 575 DTSHPMYNQIVEFLRELRKKMKEEGYVPATSLVLHDVEDEQKEENLVYHSEKLAVAFAIL 634
Query: 734 KLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
G ++V KNLR C DCH A KF+S + R+I VRD RFH F +G+CSCGDYW
Sbjct: 635 STEEGTAIKVFKNLRSCVDCHGAIKFISNITKRKITVRDSTRFHCFENGQCSCGDYW 691
Score = 174 bits (442), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 143/529 (27%), Positives = 243/529 (45%), Gaps = 77/529 (14%)
Query: 13 ANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTL 72
A+ Y + +Q+C + + VH H+ +SGF P I NRL+ +Y K LV AR +
Sbjct: 85 ASTYCNLIQVCSQTRALEE--GKKVHEHIRTSGFVPGIVIWNRLLRMYAKCGSLVDARKV 142
Query: 73 FDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHA 132
FDE+P D+ + ++ Y+ ++ AR++F++ + +D+ + AM+T Y
Sbjct: 143 FDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDE--MTEKDSYSWTAMVTGYVKKDQPEE 200
Query: 133 AIELFRDMRR-DDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNAL 191
A+ L+ M+R + +P+ FT S+ A A V+ ++ ++H +V++G + ++L
Sbjct: 201 ALVLYSLMQRVPNSRPNIFT-VSIAVAAAAAVKCIRRGKEIHGHIVRAGLDSDEVLWSSL 259
Query: 192 ISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGM 251
+ +Y KC + AR +FD++ E+D +SWT+M+ Y K+ RE
Sbjct: 260 MDMYGKC---------GCIDEARNIFDKIVEKDVVSWTSMIDRYFKSSRW---REGFSLF 307
Query: 252 SENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRT 311
SE VG +E+T+ V++ACA+ LGKQVH Y+ R
Sbjct: 308 SELVGSCERP-------------------NEYTFAGVLNACADLTTEELGKQVHGYMTRV 348
Query: 312 EAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEA 371
P +S +++LV +Y KCG + A+ + + P+ DLVSW
Sbjct: 349 GFDP---YSF-ASSSLVDMYTKCGNIESAKHVVDGCPKPDLVSW---------------- 388
Query: 372 KSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGL 431
T +I G AQNG +E LK F + G KP F +++C
Sbjct: 389 ---------------TSLIGGCAQNGQPDEALKYFDLLLKSGTKPDHVTFVNVLSACTHA 433
Query: 432 GALENGRQLHAQLVHSGYDSSLSAG-NALITMYARCGVVEAANCVFNTMPNVDS-VSWNA 489
G +E G + + S S L+ + AR G E V + MP S W +
Sbjct: 434 GLVEKGLEFFYSITEKHRLSHTSDHYTCLVDLLARSGRFEQLKSVISEMPMKPSKFLWAS 493
Query: 490 MIAALGQHGNGARAIELYEQMLKEGILPDR-ITFLTVLSACNHAGLVKE 537
++ +GN A E +++ K I P+ +T++T+ + AG +E
Sbjct: 494 VLGGCSTYGNIDLAEEAAQELFK--IEPENPVTYVTMANIYAAAGKWEE 540
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 60/115 (52%)
Query: 399 GEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNA 458
G++ L+ Q+ KP + I C+ ALE G+++H + SG+ + N
Sbjct: 66 GQKLLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNR 125
Query: 459 LITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKE 513
L+ MYA+CG + A VF+ MPN D SWN M+ + G A +L+++M ++
Sbjct: 126 LLRMYAKCGSLVDARKVFDEMPNRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEK 180
Score = 59.7 bits (143), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 10/218 (4%)
Query: 367 LIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAIT 426
L+ EA L ++ ++ +I +Q EEG K+ +R GF P + +
Sbjct: 69 LLREAVQLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTSGFVPGIVIWNRLLR 128
Query: 427 SCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVS 486
A G+L + R++ ++ + L + N ++ YA G++E A +F+ M DS S
Sbjct: 129 MYAKCGSLVDARKVFDEMP----NRDLCSWNVMVNGYAEVGLLEEARKLFDEMTEKDSYS 184
Query: 487 WNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMH 546
W AM+ + A+ LY M + + R TV A A VK RR E +H
Sbjct: 185 WTAMVTGYVKKDQPEEALVLYSLMQR--VPNSRPNIFTVSIAVAAAAAVKCIRRGKE-IH 241
Query: 547 GPY---GIPPGEDHYARFIDLLCRAGKFSEAKDVIDSL 581
G G+ E ++ +D+ + G EA+++ D +
Sbjct: 242 GHIVRAGLDSDEVLWSSLMDMYGKCGCIDEARNIFDKI 279
Score = 35.8 bits (81), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 6/109 (5%)
Query: 509 QMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRA 568
Q+L P T+ ++ C+ ++EG++ E + G PG + R + + +
Sbjct: 75 QLLGRAKKPPASTYCNLIQVCSQTRALEEGKKVHEHIRTS-GFVPGIVIWNRLLRMYAKC 133
Query: 569 GKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLM 617
G +A+ V D +P + W ++ G + + L ++ A +LF M
Sbjct: 134 GSLVDARKVFDEMPNRDLCS-WNVMVNG---YAEVGL-LEEARKLFDEM 177
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 464 bits (1194), Expect = e-129, Method: Compositional matrix adjust.
Identities = 245/704 (34%), Positives = 379/704 (53%), Gaps = 69/704 (9%)
Query: 87 LIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVK 146
L+ Y+ +++ A + F +T ++ + V +N M+ AY + + +FR M+ +++
Sbjct: 430 LLNLYAKCADIETALDYFLET--EVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIV 487
Query: 147 PDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSS 206
P+ +T+ S+L + + E Q+H ++K+ L V + LI +Y K
Sbjct: 488 PNQYTYPSILKTCIRLGDLELG-EQIHSQIIKTNFQLNAYVCSVLIDMYAKL-------- 538
Query: 207 RSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGY 266
+ A + +D +SWTTM+ GY + ++ D A
Sbjct: 539 -GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFR----------------- 580
Query: 267 VHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNA 326
+ML I+ DE T+ +SACA + G+Q+HA + LP NA
Sbjct: 581 -----QMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS----DLPFQNA 631
Query: 327 LVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSW 386
LVTLY +CGK I+E+ FE + ++W
Sbjct: 632 LVTLYSRCGK-------------------------------IEESYLAFEQTEAGDNIAW 660
Query: 387 TVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVH 446
++SG Q+G EE L++F +M EG ++ F A+ + + ++ G+Q+HA +
Sbjct: 661 NALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVITK 720
Query: 447 SGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIEL 506
+GYDS NALI+MYA+CG + A F + + VSWNA+I A +HG G+ A++
Sbjct: 721 TGYDSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVSWNAIINAYSKHGFGSEALDS 780
Query: 507 YEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLC 566
++QM+ + P+ +T + VLSAC+H GLV +G YFE+M+ YG+ P +HY +D+L
Sbjct: 781 FDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAYFESMNSEYGLSPKPEHYVCVVDMLT 840
Query: 567 RAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVL 626
RAG S AK+ I +P KP A +W LL+ C +H N+++G AA L +L P + TYVL
Sbjct: 841 RAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHKNMEIGEFAAHHLLELEPEDSATYVL 900
Query: 627 LSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKY 686
LSN+YA +WD R+ M+++GVKKEPG SWIEV N +H F V D HP A +++Y
Sbjct: 901 LSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWIEVKNSIHSFYVGDQNHPLADEIHEY 960
Query: 687 LEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKN 746
+ L ++GYV D +L++++ +QK+ + HSEKLA++FGL+ LP + V+KN
Sbjct: 961 FQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFIHSEKLAISFGLLSLPATVPINVMKN 1020
Query: 747 LRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
LR+C DCH KF+SKV REI+VRD RFHHF G CSC DYW
Sbjct: 1021 LRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEGGACSCKDYW 1064
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 153/577 (26%), Positives = 249/577 (43%), Gaps = 96/577 (16%)
Query: 41 MISSGFKPREHIINRLIDIYCKS-------LKLVYARTLFDEIPQPDIVARTTLIAAYSA 93
M+S P E + +++ C+ ++ ++AR L+ + +V LI YS
Sbjct: 177 MVSENVTPNEGTFSGVLEA-CRGGSVAFDVVEQIHARILYQGLRDSTVVC-NPLIDLYSR 234
Query: 94 SDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFT 153
+ V LAR +F+ L+++D + AMI+ S N AI LF DM + P + F+
Sbjct: 235 NGFVDLARRVFD--GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFS 292
Query: 154 SVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAA 213
SVLSA I E + Q+H V+K G T V NAL+S+Y + + +A
Sbjct: 293 SVLSACKKI-ESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGN---------LISA 342
Query: 214 RRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKM 273
+F M +RD +++ T++ G + Y + A E +M
Sbjct: 343 EHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFK----------------------RM 380
Query: 274 LMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNN----ALVT 329
+ ++ D T S++ AC+ G G+Q+HAY T + NN AL+
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQLHAY--------TTKLGFASNNKIEGALLN 432
Query: 330 LYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVM 389
LY KC + A D F + ++V WN +L AY GL+D+ ++ F
Sbjct: 433 LYAKCADIETALDYFLETEVENVVLWNVMLVAY---GLLDDLRNSF-------------- 475
Query: 390 ISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGY 449
++F QM++E P Y + + +C LG LE G Q+H+Q++ + +
Sbjct: 476 --------------RIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNF 521
Query: 450 DSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQ 509
+ + LI MYA+ G ++ A + D VSW MIA Q+ +A+ + Q
Sbjct: 522 QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQ 581
Query: 510 MLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAG 569
ML GI D + +SAC +KEG++ G + L R G
Sbjct: 582 MLDRGIRSDEVGLTNAVSACAGLQALKEGQQ-IHAQACVSGFSSDLPFQNALVTLYSRCG 640
Query: 570 KFSEAKDVIDSLPFKPSAP----IWEALLAGCRIHGN 602
K E+ L F+ + W AL++G + GN
Sbjct: 641 KIEESY-----LAFEQTEAGDNIAWNALVSGFQQSGN 672
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 143/622 (22%), Positives = 257/622 (41%), Gaps = 120/622 (19%)
Query: 16 YASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDE 75
++S L C + + +H ++ GF ++ N L+ +Y L+ A +F
Sbjct: 291 FSSVLSACKKIESL--EIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISAEHIFSN 348
Query: 76 IPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIE 135
+ Q RD V YN +I S G A+E
Sbjct: 349 MSQ---------------------------------RDAVTYNTLINGLSQCGYGEKAME 375
Query: 136 LFRDMRRDDVKPDNFTFTSVL---SALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALI 192
LF+ M D ++PD+ T S++ SA + + Q+H K G + AL+
Sbjct: 376 LFKRMHLDGLEPDSNTLASLVVACSADGTLFRGQ----QLHAYTTKLGFASNNKIEGALL 431
Query: 193 SVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGY-VKNDYLDAAREFLDGM 251
++Y KC + A F E + + W M+ Y + +D ++ R F
Sbjct: 432 NLYAKCAD---------IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIF---- 478
Query: 252 SENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRT 311
+M + I +++TY S++ C G LG+Q+H+ +++T
Sbjct: 479 -------------------RQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 312 EAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEA 371
+ + V + L+ +Y K GK++ A DI + +D+VSW +++ Y
Sbjct: 520 NF----QLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIAGY--------- 566
Query: 372 KSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGL 431
Q + ++ L F QM G + + A+++CAGL
Sbjct: 567 ----------------------TQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGL 604
Query: 432 GALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMI 491
AL+ G+Q+HAQ SG+ S L NAL+T+Y+RCG +E + F D+++WNA++
Sbjct: 605 QALKEGQQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALV 664
Query: 492 AALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGI 551
+ Q GN A+ ++ +M +EGI + TF + + A + +K+G++ + G
Sbjct: 665 SGFQQSGNNEEALRVFVRMNREGIDNNNFTFGSAVKAASETANMKQGKQVHAVI-TKTGY 723
Query: 552 PPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAE 611
+ I + + G S+A+ + K W A++ HG G +A +
Sbjct: 724 DSETEVCNALISMYAKCGSISDAEKQFLEVSTKNEVS-WNAIINAYSKHG---FGSEALD 779
Query: 612 QLFQLM-----PHHAGTYVLLS 628
Q++ P+H +LS
Sbjct: 780 SFDQMIHSNVRPNHVTLVGVLS 801
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 120/468 (25%), Positives = 201/468 (42%), Gaps = 100/468 (21%)
Query: 212 AARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHREL 271
A +VFDEMPER +W M+ +A LI +
Sbjct: 138 GAFKVFDEMPERTIFTWNKMIK----------------------ELASRNLIGEVFGLFV 175
Query: 272 KMLMLRIQLDEFTYTSVISAC-ANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTL 330
+M+ + +E T++ V+ AC S F + +Q+HA +L + S V N L+ L
Sbjct: 176 RMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQGLRD----STVVCNPLIDL 231
Query: 331 YWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMI 390
Y + G V+ AR +F+ + +D SW A MI
Sbjct: 232 YSRNGFVDLARRVFDGLRLKDHSSWVA-------------------------------MI 260
Query: 391 SGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYD 450
SGL++N E ++LF M + G P YAF+ +++C + +LE G QLH ++ G+
Sbjct: 261 SGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFS 320
Query: 451 SSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQM 510
S NAL+++Y G + +A +F+ M D+V++N +I L Q G G +A+EL+++M
Sbjct: 321 SDTYVCNALVSLYFHLGNLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRM 380
Query: 511 LKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGK 570
+G+ PD T +++ AC+ G + G++ G ++L +
Sbjct: 381 HLDGLEPDSNTLASLVVACSADGTLFRGQQ-LHAYTTKLGFASNNKIEGALLNLYAKCAD 439
Query: 571 FSEAKD---------------------VIDSL--PFK-----------PSAPIWEALLAG 596
A D ++D L F+ P+ + ++L
Sbjct: 440 IETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKT 499
Query: 597 CRIHGNIDLGIQAAEQL----FQLMPHHAGTYVLLSNMYANLGRWDDA 640
C G+++LG Q Q+ FQL +A +L +MYA LG+ D A
Sbjct: 500 CIRLGDLELGEQIHSQIIKTNFQL---NAYVCSVLIDMYAKLGKLDTA 544
Score = 99.8 bits (247), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 109/219 (49%), Gaps = 11/219 (5%)
Query: 335 GKVNEARDIFNQMPERDLVSWNAILSA-----YVSAGLIDEAKSLFEAMRERNLLSWTVM 389
G ++E R + +Q+ + L S N LS Y+ G + A +F+ M ER + +W M
Sbjct: 99 GSLDEGRKLHSQILKLGLDS-NGCLSEKLFDFYLFKGDLYGAFKVFDEMPERTIFTWNKM 157
Query: 390 ISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSC-AGLGALENGRQLHAQLVHSG 448
I LA E LF +M E P + F+G + +C G A + Q+HA++++ G
Sbjct: 158 IKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARILYQG 217
Query: 449 YDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYE 508
S N LI +Y+R G V+ A VF+ + D SW AMI+ L ++ A AI L+
Sbjct: 218 LRDSTVVCNPLIDLYSRNGFVDLARRVFDGLRLKDHSSWVAMISGLSKNECEAEAIRLFC 277
Query: 509 QMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHG 547
M GI+P F +VLSAC ++ G E +HG
Sbjct: 278 DMYVLGIMPTPYAFSSVLSACKKIESLEIG----EQLHG 312
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 256/756 (33%), Positives = 417/756 (55%), Gaps = 71/756 (9%)
Query: 37 VHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDN 96
+H ++ G+ + N L+ Y + +L AR +FDE+ + ++V+ T++I Y+ D
Sbjct: 156 IHGLIVKMGYAKDLFVQNSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDF 215
Query: 97 VKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVL 156
K A ++F FR +R ++V P++ T V+
Sbjct: 216 AKDAVDLF--------------------------------FRMVRDEEVTPNSVTMVCVI 243
Query: 157 SALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRV 216
SA A + E+ + +++ + SG + +++AL+ +Y+KC + + A+R+
Sbjct: 244 SACAKL-EDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKC---------NAIDVAKRL 293
Query: 217 FDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMS-ENVGVAWNALISGYVHRELKMLM 275
FDE + M + YV+ G++ E +GV + SG
Sbjct: 294 FDEYGASNLDLCNAMASNYVRQ-----------GLTREALGVFNLMMDSG---------- 332
Query: 276 LRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCG 335
++ D + S IS+C+ GK H Y+LR + + NAL+ +Y KC
Sbjct: 333 --VRPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDN----ICNALIDMYMKCH 386
Query: 336 KVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQ 395
+ + A IF++M + +V+WN+I++ YV G +D A FE M E+N++SW +ISGL Q
Sbjct: 387 RQDTAFRIFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQ 446
Query: 396 NGYGEEGLKLFSQMR-LEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLS 454
EE +++F M+ EG ++C LGAL+ + ++ + +G +
Sbjct: 447 GSLFEEAIEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVR 506
Query: 455 AGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEG 514
G L+ M++RCG E+A +FN++ N D +W A I A+ GN RAIEL++ M+++G
Sbjct: 507 LGTTLVDMFSRCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQG 566
Query: 515 ILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEA 574
+ PD + F+ L+AC+H GLV++G+ F +M +G+ P + HY +DLL RAG EA
Sbjct: 567 LKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEA 626
Query: 575 KDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANL 634
+I+ +P +P+ IW +LLA CR+ GN+++ AAE++ L P G+YVLLSN+YA+
Sbjct: 627 VQLIEDMPMEPNDVIWNSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASA 686
Query: 635 GRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEM 694
GRW+D A+VR M+++G++K PG S I++ K H F D +HPE + L+++
Sbjct: 687 GRWNDMAKVRLSMKEKGLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRA 746
Query: 695 RKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCH 754
LG+VPD VL D++ +K + LS HSEKLA+A+GL+ G T+R++KNLR+C DCH
Sbjct: 747 SHLGHVPDLSNVLMDVDEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCH 806
Query: 755 NAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
+ KF SKV REI++RD RFH+ R GKCSCGD+W
Sbjct: 807 SFAKFASKVYNREIILRDNNRFHYIRQGKCSCGDFW 842
Score = 159 bits (402), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 146/559 (26%), Positives = 241/559 (43%), Gaps = 107/559 (19%)
Query: 61 CKSLK--LVYARTLFDEIPQPDIVARTTLIA---AYSASDNVKLAREMFNKTPLKMRDTV 115
CK++ ++ R+L + D+ T L+A +++ A+E+F + + T
Sbjct: 42 CKTIDELKMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENS--ESYGTC 99
Query: 116 F-YNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHC 174
F YN++I Y+ + + AI LF M + PD +TF LSA A + +Q+H
Sbjct: 100 FMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAK-SRAKGNGIQIHG 158
Query: 175 TVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTG 234
+VK G V N+L+ Y +C + +AR+VFDEM ER+ +SWT+M+ G
Sbjct: 159 LIVKMGYAKDLFVQNSLVHFYAEC---------GELDSARKVFDEMSERNVVSWTSMICG 209
Query: 235 YVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACAN 294
Y + D+ A + M + V N++ T VISACA
Sbjct: 210 YARRDFAKDAVDLFFRMVRDEEVTPNSV---------------------TMVCVISACAK 248
Query: 295 SGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVS 354
G++V+A++ + E + + +ALV +Y KC ++ A+ +F++ +L
Sbjct: 249 LEDLETGEKVYAFIRNSGI----EVNDLMVSALVDMYMKCNAIDVAKRLFDEYGASNLDL 304
Query: 355 WNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGF 414
NA+ S YV GL EA L +F+ M G
Sbjct: 305 CNAMASNYVRQGLTREA-------------------------------LGVFNLMMDSGV 333
Query: 415 KPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARC-------- 466
+P + AI+SC+ L + G+ H ++ +G++S + NALI MY +C
Sbjct: 334 RPDRISMLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFR 393
Query: 467 -----------------------GVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARA 503
G V+AA F TMP + VSWN +I+ L Q A
Sbjct: 394 IFDRMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEA 453
Query: 504 IELYEQML-KEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFI 562
IE++ M +EG+ D +T +++ SAC H G + + + + GI +
Sbjct: 454 IEVFCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIE-KNGIQLDVRLGTTLV 512
Query: 563 DLLCRAGKFSEAKDVIDSL 581
D+ R G A + +SL
Sbjct: 513 DMFSRCGDPESAMSIFNSL 531
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 104/394 (26%), Positives = 182/394 (46%), Gaps = 60/394 (15%)
Query: 241 LDAAREFLDGMSENVGVA--WNALISGYVH----RELKMLMLR-----IQLDEFTYTSVI 289
L A+E + SE+ G +N+LI GY E +L LR I D++T+ +
Sbjct: 83 LSFAKEVFEN-SESYGTCFMYNSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGL 141
Query: 290 SACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPE 349
SACA S G Q+H ++ K+ A+D+F Q
Sbjct: 142 SACAKSRAKGNGIQIHGLIV--------------------------KMGYAKDLFVQ--- 172
Query: 350 RDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQM 409
N+++ Y G +D A+ +F+ M ERN++SWT MI G A+ + ++ + LF +M
Sbjct: 173 ------NSLVHFYAECGELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 410 -RLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGV 468
R E P I++CA L LE G +++A + +SG + + +AL+ MY +C
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCNA 286
Query: 469 VEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSA 528
++ A +F+ + NAM + + G A+ ++ M+ G+ PDRI+ L+ +S+
Sbjct: 287 IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAISS 346
Query: 529 CNHAGLVKEGRRYFETMHGPY---GIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKP 585
C+ + G+ + HG G ++ ID+ + + A + D + K
Sbjct: 347 CSQLRNILWGK----SCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNK- 401
Query: 586 SAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPH 619
+ W +++AG +G +D AA + F+ MP
Sbjct: 402 TVVTWNSIVAGYVENGEVD----AAWETFETMPE 431
Score = 86.3 bits (212), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 144/340 (42%), Gaps = 39/340 (11%)
Query: 34 ARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSA 93
+S H +++ +GF+ ++I N LID+Y K + A +FD + +V +++A Y
Sbjct: 356 GKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKTVVTWNSIVAGYVE 415
Query: 94 SDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMR-RDDVKPDNFTF 152
+ V A E F P K + V +N +I+ S AIE+F M+ ++ V D T
Sbjct: 416 NGEVDAAWETFETMPEK--NIVSWNTIISGLVQGSLFEEAIEVFCSMQSQEGVNADGVTM 473
Query: 153 TSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGA 212
S+ SA + + ++ + K+G L + L+ ++ +C +
Sbjct: 474 MSIASACGHLGALD-LAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE---------S 523
Query: 213 ARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELK 272
A +F+ + RD +WT + + A E D M E
Sbjct: 524 AMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQ------------------ 565
Query: 273 MLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYW 332
++ D + ++AC++ GL + GK++ +L+ + +V L
Sbjct: 566 ----GLKPDGVAFVGALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHY---GCMVDLLG 618
Query: 333 KCGKVNEARDIFNQMP-ERDLVSWNAILSAYVSAGLIDEA 371
+ G + EA + MP E + V WN++L+A G ++ A
Sbjct: 619 RAGLLEEAVQLIEDMPMEPNDVIWNSLLAACRVQGNVEMA 658
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust.
Identities = 234/602 (38%), Positives = 358/602 (59%), Gaps = 67/602 (11%)
Query: 189 NALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFL 248
N L+++Y KC S + AR+VF++MP+RD ++WTT+++GY ++D A F
Sbjct: 99 NTLLNMYAKCGS---------LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFF 149
Query: 249 DGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYL 308
+ +ML +EFT +SVI A A G Q+H +
Sbjct: 150 N----------------------QMLRFGYSPNEFTLSSVIKAAAAERRGCCGHQLHGFC 187
Query: 309 LRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLI 368
+ K + ++ V +AL+ LY + G +++A+ +F+ + R+ VSWNA
Sbjct: 188 V----KCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNA----------- 232
Query: 369 DEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSC 428
+I+G A+ E+ L+LF M +GF+P +++A +C
Sbjct: 233 --------------------LIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGAC 272
Query: 429 AGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWN 488
+ G LE G+ +HA ++ SG AGN L+ MYA+ G + A +F+ + D VSWN
Sbjct: 273 SSTGFLEQGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWN 332
Query: 489 AMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGP 548
+++ A QHG G A+ +E+M + GI P+ I+FL+VL+AC+H+GL+ EG Y+E M
Sbjct: 333 SLLTAYAQHGFGKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKD 392
Query: 549 YGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQ 608
GI P HY +DLL RAG + A I+ +P +P+A IW+ALL CR+H N +LG
Sbjct: 393 -GIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAY 451
Query: 609 AAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVH 668
AAE +F+L P G +V+L N+YA+ GRW+DAARVRK M++ GVKKEP CSW+E++N +H
Sbjct: 452 AAEHVFELDPDDPGPHVILYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIH 511
Query: 669 VFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAV 728
+F+ +D HP+ + + + E+++ ++++LGYVPDT V+ ++ ++E L HSEK+A+
Sbjct: 512 MFVANDERHPQREEIARKWEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIAL 571
Query: 729 AFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGD 788
AF L+ P G+T+ + KN+R+CGDCH A K SKVVGREI+VRD RFHHF+DG CSC D
Sbjct: 572 AFALLNTPPGSTIHIKKNIRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKD 631
Query: 789 YW 790
YW
Sbjct: 632 YW 633
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 119/447 (26%), Positives = 199/447 (44%), Gaps = 78/447 (17%)
Query: 65 KLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAY 124
++V+A L I + DIV TL+ Y+ +++ AR++F K P RD V + +I+ Y
Sbjct: 80 RIVHAHIL-QSIFRHDIVMGNTLLNMYAKCGSLEEARKVFEKMP--QRDFVTWTTLISGY 136
Query: 125 SHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCM--QMHCTVVKSGTG 182
S + A+ F M R P+ FT +SV+ A A E + C Q+H VK G
Sbjct: 137 SQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAA---AERRGCCGHQLHGFCVKCGFD 193
Query: 183 LFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLD 242
V +AL+ +Y + LM A+ VFD + R+++SW ++ G+ + +
Sbjct: 194 SNVHVGSALLDLYTR---------YGLMDDAQLVFDALESRNDVSWNALIAGHARRSGTE 244
Query: 243 AAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGK 302
A E GM L G+ + F+Y S+ AC+++G GK
Sbjct: 245 KALELFQGM----------LRDGF------------RPSHFSYASLFGACSSTGFLEQGK 282
Query: 303 QVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAY 362
VHAY++++ K N L+ +Y K G +++AR IF+++ +RD+VSWN++L+AY
Sbjct: 283 WVHAYMIKSGEK----LVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAY 338
Query: 363 VSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFA 422
G +G+E + F +MR G +P + +F
Sbjct: 339 AQHG-------------------------------FGKEAVWWFEEMRRVGIRPNEISFL 367
Query: 423 GAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNV 482
+T+C+ G L+ G + + G ++ + R G + A MP
Sbjct: 368 SVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVTVVDLLGRAGDLNRALRFIEEMPIE 427
Query: 483 DSVS-WNAMIAALGQHGN---GARAIE 505
+ + W A++ A H N GA A E
Sbjct: 428 PTAAIWKALLNACRMHKNTELGAYAAE 454
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 90/307 (29%), Positives = 156/307 (50%), Gaps = 20/307 (6%)
Query: 308 LLRTEAKPTPEFSLPVNNALV-TLYWKC--------GKVNEARDIFNQMPERDLVSWNAI 358
LLRT + +P + TL KC G++ A I + D+V N +
Sbjct: 43 LLRTSSNDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAH-ILQSIFRHDIVMGNTL 101
Query: 359 LSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCD 418
L+ Y G ++EA+ +FE M +R+ ++WT +ISG +Q+ + L F+QM G+ P +
Sbjct: 102 LNMYAKCGSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNE 161
Query: 419 YAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNT 478
+ + I + A G QLH V G+DS++ G+AL+ +Y R G+++ A VF+
Sbjct: 162 FTLSSVIKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDA 221
Query: 479 MPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEG 538
+ + + VSWNA+IA + +A+EL++ ML++G P ++ ++ AC+ G +++G
Sbjct: 222 LESRNDVSWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQG 281
Query: 539 RRYFETMHGPYGIPPGEDHYA----RFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALL 594
+ +H Y I GE A +D+ ++G +A+ + D L K W +LL
Sbjct: 282 K----WVHA-YMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLL 335
Query: 595 AGCRIHG 601
HG
Sbjct: 336 TAYAQHG 342
Score = 86.3 bits (212), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 138/326 (42%), Gaps = 70/326 (21%)
Query: 37 VHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDN 96
+H + GF H+ + L+D+Y + + A+ +FD + + V+ LIA
Sbjct: 183 LHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSWNALIA------- 235
Query: 97 VKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVL 156
++ S A+ELF+ M RD +P +F++ S+
Sbjct: 236 --------------------------GHARRSGTEKALELFQGMLRDGFRPSHFSYASLF 269
Query: 157 SALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRV 216
A + E Q +H ++KSG L N L+ +Y K S + AR++
Sbjct: 270 GACSSTGFLE-QGKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGS---------IHDARKI 319
Query: 217 FDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLML 276
FD + +RD +SW +++T Y ++ + A + + M VG
Sbjct: 320 FDRLAKRDVVSWNSLLTAYAQHGFGKEAVWWFEEM-RRVG-------------------- 358
Query: 277 RIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGK 336
I+ +E ++ SV++AC++SGL L + H Y L + PE V +V L + G
Sbjct: 359 -IRPNEISFLSVLTACSHSGL--LDEGWHYYELMKKDGIVPEAWHYVT--VVDLLGRAGD 413
Query: 337 VNEARDIFNQMP-ERDLVSWNAILSA 361
+N A +MP E W A+L+A
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNA 439
Score = 57.8 bits (138), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 64/143 (44%), Gaps = 35/143 (24%)
Query: 16 YASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDE 75
YAS C + + VHA+MI SG K N L+D+Y KS + AR +FD
Sbjct: 265 YASLFGACSSTGFLEQ--GKWVHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDR 322
Query: 76 IPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIE 135
+ + D+V+ +N+++TAY+ + G A+
Sbjct: 323 LAKRDVVS---------------------------------WNSLLTAYAQHGFGKEAVW 349
Query: 136 LFRDMRRDDVKPDNFTFTSVLSA 158
F +MRR ++P+ +F SVL+A
Sbjct: 350 WFEEMRRVGIRPNEISFLSVLTA 372
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 281/799 (35%), Positives = 421/799 (52%), Gaps = 117/799 (14%)
Query: 66 LVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYS 125
LVY + L D + D+ L+ YS + AR++F++ P+ RD V +N++I+ YS
Sbjct: 127 LVYEQIL-DMGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPV--RDLVSWNSLISGYS 183
Query: 126 HNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALA--LIVEEEKQCMQMHCTVVKSGTGL 183
+ A+E++ +++ + PD+FT +SVL A L+V KQ +H +KSG
Sbjct: 184 SHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLVV---KQGQGLHGFALKSGVNS 240
Query: 184 FTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYL-D 242
V N L+++Y+K P ARRVFDEM RD +S+ TM+ GY+K + + +
Sbjct: 241 VVVVNNGLVAMYLK-FRRP--------TDARRVFDEMDVRDSVSYNTMICGYLKLEMVEE 291
Query: 243 AAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGK 302
+ R FL+ + + + D T +SV+ AC + L K
Sbjct: 292 SVRMFLENLDQ------------------------FKPDLLTVSSVLRACGHLRDLSLAK 327
Query: 303 QVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAY 362
++ Y+L K V N L+ +Y KCG + ARD+FN M +D VSWN+I+S Y
Sbjct: 328 YIYNYML----KAGFVLESTVRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGY 383
Query: 363 VSAGLIDEAKSLFEAM----RERNLLSWTVMIS------------GLAQNGY-------- 398
+ +G + EA LF+ M + + +++ ++IS GL NG
Sbjct: 384 IQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDL 443
Query: 399 -------------GEEG--LKLFS-------------------------------QMRLE 412
GE G LK+FS QMR
Sbjct: 444 SVSNALIDMYAKCGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKS 503
Query: 413 GFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAA 472
P F + CA L A G+++H L+ GY+S L GNALI MY++CG +E +
Sbjct: 504 EVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENS 563
Query: 473 NCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHA 532
+ VF M D V+W MI A G +G G +A+E + M K GI+PD + F+ ++ AC+H+
Sbjct: 564 SRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHS 623
Query: 533 GLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEA 592
GLV EG FE M Y I P +HYA +DLL R+ K S+A++ I ++P KP A IW +
Sbjct: 624 GLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWAS 683
Query: 593 LLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGV 652
+L CR G+++ + + ++ +L P G +L SN YA L +WD + +RK ++D+ +
Sbjct: 684 VLRACRTSGDMETAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHI 743
Query: 653 KKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDM-E 711
K PG SWIEV VHVF D + P+++A+YK LE L M K GY+PD + V ++ E
Sbjct: 744 TKNPGYSWIEVGKNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEE 803
Query: 712 SDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVR 771
++K + HSE+LA+AFGL+ G ++V+KNLR+CGDCH K +SK+VGREI+VR
Sbjct: 804 EEEKRRLICGHSERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVR 863
Query: 772 DGKRFHHFRDGKCSCGDYW 790
D RFH F+DG CSC D W
Sbjct: 864 DANRFHLFKDGTCSCKDRW 882
Score = 158 bits (400), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 149/603 (24%), Positives = 265/603 (43%), Gaps = 105/603 (17%)
Query: 35 RSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSAS 94
R +HA +IS G + +LID Y + + ++F + S +
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRV---------------SPA 68
Query: 95 DNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTS 154
NV L +N++I A+S N A+E + +R V PD +TF S
Sbjct: 69 KNVYL-----------------WNSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPS 111
Query: 155 VLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAAR 214
V+ A A + + E + ++ ++ G V NAL+ +Y S L+ AR
Sbjct: 112 VIKACAGLFDAEMGDL-VYEQILDMGFESDLFVGNALVDMY---------SRMGLLTRAR 161
Query: 215 RVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKML 274
+VFDEMP RD +SW ++++GY + Y + A E ++ ELK
Sbjct: 162 QVFDEMPVRDLVSWNSLISGYSSHGYYEEALE--------------------IYHELKNS 201
Query: 275 MLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKC 334
I D FT +SV+ A N + + G+ +H + L K + VNN LV +Y K
Sbjct: 202 W--IVPDSFTVSSVLPAFGNLLVVKQGQGLHGFAL----KSGVNSVVVVNNGLVAMYLKF 255
Query: 335 GKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLA 394
+ +AR +F++M RD VS+N ++ Y+ ++
Sbjct: 256 RRPTDARRVFDEMDVRDSVSYNTMICGYLKLEMV-------------------------- 289
Query: 395 QNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLS 454
EE +++F + L+ FKP + + +C L L + ++ ++ +G+ +
Sbjct: 290 -----EESVRMFLE-NLDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFVLEST 343
Query: 455 AGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEG 514
N LI +YA+CG + A VFN+M D+VSWN++I+ Q G+ A++L++ M+
Sbjct: 344 VRNILIDVYAKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDLMEAMKLFKMMMIME 403
Query: 515 ILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEA 574
D IT+L ++S +K G+ + GI ID+ + G+ ++
Sbjct: 404 EQADHITYLMLISVSTRLADLKFGKG-LHSNGIKSGICIDLSVSNALIDMYAKCGEVGDS 462
Query: 575 KDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQL--FQLMPHHAGTYVLLSNMYA 632
+ S+ + W +++ C G+ G+Q Q+ +++P A T+++ M A
Sbjct: 463 LKIFSSMGTGDTVT-WNTVISACVRFGDFATGLQVTTQMRKSEVVPDMA-TFLVTLPMCA 520
Query: 633 NLG 635
+L
Sbjct: 521 SLA 523
Score = 114 bits (286), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 116/538 (21%), Positives = 220/538 (40%), Gaps = 107/538 (19%)
Query: 1 MMMKNADYIRTLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIY 60
M ++N D + +S L+ C + SLA+ ++ +M+ +GF + N LID+Y
Sbjct: 295 MFLENLDQFKPDLLTVSSVLRACGHLRDL--SLAKYIYNYMLKAGFVLESTVRNILIDVY 352
Query: 61 CKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAM 120
K ++ AR +F+ + D V+ ++I+ Y S ++
Sbjct: 353 AKCGDMITARDVFNSMECKDTVSWNSIISGYIQSGDL----------------------- 389
Query: 121 ITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSG 180
A++LF+ M + + D+ T+ ++S ++ + + K +H +KSG
Sbjct: 390 ----------MEAMKLFKMMMIMEEQADHITYLMLIS-VSTRLADLKFGKGLHSNGIKSG 438
Query: 181 TGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDY 240
+ SV NALI +Y KC +G + ++F M D ++W T+++ V+
Sbjct: 439 ICIDLSVSNALIDMYAKC---------GEVGDSLKIFSSMGTGDTVTWNTVISACVRFG- 488
Query: 241 LDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRL 300
+F G+ +M + D T+ + CA+ RL
Sbjct: 489 -----DFATGLQVTT----------------QMRKSEVVPDMATFLVTLPMCASLAAKRL 527
Query: 301 GKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILS 360
GK++H LLR E L + NAL+ +Y KCG + + +F +M RD+V+W ++
Sbjct: 528 GKEIHCCLLRFGY----ESELQIGNALIEMYSKCGCLENSSRVFERMSRRDVVTWTGMIY 583
Query: 361 AYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYA 420
AY G GE+ L+ F+ M G P
Sbjct: 584 AY-------------------------------GMYGEGEKALETFADMEKSGIVPDSVV 612
Query: 421 FAGAITSCAGLGALENGRQLHAQL-VHSGYDSSLSAGNALITMYARCGVVEAANCVFNTM 479
F I +C+ G ++ G ++ H D + ++ + +R + A M
Sbjct: 613 FIAIIYACSHSGLVDEGLACFEKMKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAM 672
Query: 480 P-NVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVK 536
P D+ W +++ A G+ A + ++++ + PD + ++L++ +A L K
Sbjct: 673 PIKPDASIWASVLRACRTSGDMETAERVSRRIIE--LNPDDPGY-SILASNAYAALRK 727
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 254/730 (34%), Positives = 404/730 (55%), Gaps = 28/730 (3%)
Query: 62 KSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMI 121
K LKL+ RT V + I+ S + AR+ F+ L+ + +N+++
Sbjct: 2 KRLKLILRRTYLTSTG----VNCSFEISRLSRIGKINEARKFFDS--LQFKAIGSWNSIV 55
Query: 122 TAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGT 181
+ Y N A +LF +M +V N + + +IVE M V S T
Sbjct: 56 SGYFSNGLPKEARQLFDEMSERNVVSWNGLVSGYIKN-RMIVEARNVFELMPERNVVSWT 114
Query: 182 GLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYL 241
A++ Y++ ++G A +F MPER+E+SWT M G + + +
Sbjct: 115 --------AMVKGYMQ---------EGMVGEAESLFWRMPERNEVSWTVMFGGLIDDGRI 157
Query: 242 DAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLG 301
D AR+ D M VA +I G RE ++ R+ DE +V++ +R
Sbjct: 158 DKARKLYDMMPVKDVVASTNMIGGLC-REGRVDEARLIFDEMRERNVVTWTTMITGYRQN 216
Query: 302 KQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSA 361
+V + R + PE + +++ Y G++ +A + F MP + +++ NA++
Sbjct: 217 NRVD--VARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNAMIVG 274
Query: 362 YVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAF 421
+ G I +A+ +F+ M +R+ +W MI + G+ E L LF+QM+ +G +P +
Sbjct: 275 FGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSL 334
Query: 422 AGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPN 481
++ CA L +L+ GRQ+HA LV +D + + L+TMY +CG + A VF+ +
Sbjct: 335 ISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSS 394
Query: 482 VDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRY 541
D + WN++I+ HG G A++++ +M G +P+++T + +L+AC++AG ++EG
Sbjct: 395 KDIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEI 454
Query: 542 FETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHG 601
FE+M + + P +HY+ +D+L RAG+ +A ++I+S+ KP A +W ALL C+ H
Sbjct: 455 FESMESKFCVTPTVEHYSCTVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHS 514
Query: 602 NIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWI 661
+DL AA++LF+ P +AGTYVLLS++ A+ +W D A VRK MR V K PGCSWI
Sbjct: 515 RLDLAEVAAKKLFENEPDNAGTYVLLSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWI 574
Query: 662 EVDNKVHVFLVDDTA-HPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALS 720
EV KVH+F HPE + LE+ +R+ GY PD VLHD++ ++K +LS
Sbjct: 575 EVGKKVHMFTRGGIKNHPEQAMILMMLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLS 634
Query: 721 THSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFR 780
HSE+LAVA+GL+KLP G +RV+KNLR+CGDCH A K +SKV REI++RD RFHHF
Sbjct: 635 RHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKVTEREIILRDANRFHHFN 694
Query: 781 DGKCSCGDYW 790
+G+CSC DYW
Sbjct: 695 NGECSCRDYW 704
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 107/446 (23%), Positives = 184/446 (41%), Gaps = 114/446 (25%)
Query: 56 LIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTV 115
+I C+ ++ AR +FDE+ + ++V TT+I Y ++ V +AR++F P K V
Sbjct: 178 MIGGLCREGRVDEARLIFDEMRERNVVTWTTMITGYRQNNRVDVARKLFEVMPEKTE--V 235
Query: 116 FYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCT 175
+ +M+ Y+ + A E F M +KP V++ A+IV
Sbjct: 236 SWTSMLLGYTLSGRIEDAEEFFEVM---PMKP-------VIACNAMIV------------ 273
Query: 176 VVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGY 235
G G + ARRVFD M +RD +W M+ Y
Sbjct: 274 ----GFGEVGEI-----------------------SKARRVFDLMEDRDNATWRGMIKAY 306
Query: 236 VKNDY-LDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACAN 294
+ + L+A F + V ++ +LI S++S CA
Sbjct: 307 ERKGFELEALDLFAQMQKQGVRPSFPSLI-----------------------SILSVCAT 343
Query: 295 SGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVS 354
+ G+QVHA+L+R + + V + L+T+Y KCG++ +A+ +F++ +D++
Sbjct: 344 LASLQYGRQVHAHLVRCQFDD----DVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIM 399
Query: 355 WNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGF 414
WN+I+S Y S GL GEE LK+F +M G
Sbjct: 400 WNSIISGYASHGL-------------------------------GEEALKIFHEMPSSGT 428
Query: 415 KPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGY--DSSLSAGNALITMYARCGVVEAA 472
P +T+C+ G LE G ++ + S + ++ + + M R G V+ A
Sbjct: 429 MPNKVTLIAILTACSYAGKLEEGLEIFESM-ESKFCVTPTVEHYSCTVDMLGRAGQVDKA 487
Query: 473 NCVFNTMP-NVDSVSWNAMIAALGQH 497
+ +M D+ W A++ A H
Sbjct: 488 MELIESMTIKPDATVWGALLGACKTH 513
Score = 72.8 bits (177), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/355 (21%), Positives = 147/355 (41%), Gaps = 69/355 (19%)
Query: 56 LIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKM---- 111
+I Y ++ ++ AR LF+ +P+ V+ T+++ Y+ S ++ A E F P+K
Sbjct: 209 MITGYRQNNRVDVARKLFEVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIAC 268
Query: 112 -------------------------RDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVK 146
RD + MI AY A++LF M++ V+
Sbjct: 269 NAMIVGFGEVGEISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVR 328
Query: 147 PDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSS 206
P + S+LS A + + Q+H +V+ V + L+++YVKC
Sbjct: 329 PSFPSLISILSVCATLASLQ-YGRQVHAHLVRCQFDDDVYVASVLMTMYVKC-------- 379
Query: 207 RSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGY 266
+ A+ VFD +D + W ++++GY + + A + M SG
Sbjct: 380 -GELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKIFHEMPS----------SGT 428
Query: 267 VHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNA 326
+ ++ T ++++AC+ +G G ++ + E+K ++ +
Sbjct: 429 MP------------NKVTLIAILTACSYAGKLEEGLEIFESM---ESKFCVTPTVEHYSC 473
Query: 327 LVTLYWKCGKVNEARDIFNQMPER-DLVSWNAILSAYVSAGLID----EAKSLFE 376
V + + G+V++A ++ M + D W A+L A + +D AK LFE
Sbjct: 474 TVDMLGRAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFE 528
Score = 52.0 bits (123), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 57/109 (52%), Gaps = 2/109 (1%)
Query: 34 ARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSA 93
R VHAH++ F ++ + L+ +Y K +LV A+ +FD DI+ ++I+ Y++
Sbjct: 350 GRQVHAHLVRCQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYAS 409
Query: 94 SDNVKLAREMFNKTPLK--MRDTVFYNAMITAYSHNSNGHAAIELFRDM 140
+ A ++F++ P M + V A++TA S+ +E+F M
Sbjct: 410 HGLGEEALKIFHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESM 458
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 454 bits (1167), Expect = e-126, Method: Compositional matrix adjust.
Identities = 252/693 (36%), Positives = 390/693 (56%), Gaps = 69/693 (9%)
Query: 103 MFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALI 162
+FN+ K D +N++I + + + A+ F MR+ + P +F + A + +
Sbjct: 31 LFNRYVDKT-DVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSL 89
Query: 163 VE--EEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEM 220
+ KQ Q V + +F S +ALI +Y C + AR+VFDE+
Sbjct: 90 FDIFSGKQTHQ-QAFVFGYQSDIFVS--SALIVMYSTC---------GKLEDARKVFDEI 137
Query: 221 PERDELSWTTMMTGY-VKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQ 279
P+R+ +SWT+M+ GY + + LDA F D L+ + M
Sbjct: 138 PKRNIVSWTSMIRGYDLNGNALDAVSLFKD------------LLVDENDDDDAMF----- 180
Query: 280 LDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGK--V 337
LD SVISAC+ L + +H++++ K + + V N L+ Y K G+ V
Sbjct: 181 LDSMGLVSVISACSRVPAKGLTESIHSFVI----KRGFDRGVSVGNTLLDAYAKGGEGGV 236
Query: 338 NEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNG 397
AR IF+Q+ ++D VS+N+I+S Y +G+ +EA +F + + ++++ +
Sbjct: 237 AVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAI-------- 288
Query: 398 YGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGN 457
+ + + + GAL G+ +H Q++ G + + G
Sbjct: 289 ----------------------TLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 458 ALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILP 517
++I MY +CG VE A F+ M N + SW AMIA G HG+ A+A+EL+ M+ G+ P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 518 DRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDV 577
+ ITF++VL+AC+HAGL EG R+F M G +G+ PG +HY +DLL RAG +A D+
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 578 IDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRW 637
I + KP + IW +LLA CRIH N++L + +LF+L + G Y+LLS++YA+ GRW
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRW 506
Query: 638 DDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKL 697
D RVR +M++RG+ K PG S +E++ +VHVFL+ D HP+ + +Y++L +L ++ +
Sbjct: 507 KDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEA 566
Query: 698 GYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAF 757
GYV +T V HD++ ++KE L HSEKLA+AFG+M G+TV V+KNLR+C DCHN
Sbjct: 567 GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVI 626
Query: 758 KFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
K +SK+V RE VVRD KRFHHF+DG CSCGDYW
Sbjct: 627 KLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 106/438 (24%), Positives = 193/438 (44%), Gaps = 76/438 (17%)
Query: 78 QPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELF 137
Q DI + LI YS ++ AR++F++ P R+ V + +MI Y N N A+ LF
Sbjct: 108 QSDIFVSSALIVMYSTCGKLEDARKVFDEIP--KRNIVSWTSMIRGYDLNGNALDAVSLF 165
Query: 138 RDMRRDDVKPDNFTFTSVLSALALI-----VEEEKQCMQMHCTVVKSGTGLFTSVLNALI 192
+D+ D+ D+ F + +++I V + +H V+K G SV N L+
Sbjct: 166 KDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRGFDRGVSVGNTLL 225
Query: 193 SVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMS 252
Y K + AR++FD++ ++D +S+ ++M+ Y ++ + A E +
Sbjct: 226 DAYAK-------GGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLV 278
Query: 253 ENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTE 312
+N V +NA+ T ++V+ A ++SG R+GK +H ++R
Sbjct: 279 KNKVVTFNAI---------------------TLSTVLLAVSHSGALRIGKCIHDQVIRM- 316
Query: 313 AKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAK 372
E + V +++ +Y KCG+V AR F++M +++ SW A+
Sbjct: 317 ---GLEDDVIVGTSIIDMYCKCGRVETARKAFDRMKNKNVRSWTAM-------------- 359
Query: 373 SLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLG 432
I+G +G+ + L+LF M G +P F + +C+ G
Sbjct: 360 -----------------IAGYGMHGHAAKALELFPAMIDSGVRPNYITFVSVLAACSHAG 402
Query: 433 A-LENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMP-NVDSVSWNAM 490
+E R +A G + L ++ + R G ++ A + M DS+ W+++
Sbjct: 403 LHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSL 462
Query: 491 IAALGQHGNGARAIELYE 508
+AA H N +EL E
Sbjct: 463 LAACRIHKN----VELAE 476
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 196/424 (46%), Gaps = 61/424 (14%)
Query: 205 SSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALIS 264
S ++L + R+ + + TT+ YV + + + ++ + G + AL++
Sbjct: 5 SKKALFCSVSRLLHTERHTERQNLTTLFNRYVDKTDVFSWNSVIADLARS-GDSAEALLA 63
Query: 265 GYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRL--GKQVH--AYLLRTEAKPTPEFS 320
R+L + R ++ I AC S LF + GKQ H A++ ++
Sbjct: 64 FSSMRKLSLYPTRS-----SFPCAIKAC--SSLFDIFSGKQTHQQAFVFGYQS------D 110
Query: 321 LPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRE 380
+ V++AL+ +Y CGK+ +AR +F+++P+R++VSW +++ Y G +A SLF+ +
Sbjct: 111 IFVSSALIVMYSTCGKLEDARKVFDEIPKRNIVSWTSMIRGYDLNGNALDAVSLFKDL-- 168
Query: 381 RNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQL 440
L ++ + L S I++C+ + A +
Sbjct: 169 ------------LVDENDDDDAMFLDSM-----------GLVSVISACSRVPAKGLTESI 205
Query: 441 HAQLVHSGYDSSLSAGNALITMYARCGV--VEAANCVFNTMPNVDSVSWNAMIAALGQHG 498
H+ ++ G+D +S GN L+ YA+ G V A +F+ + + D VS+N++++ Q G
Sbjct: 206 HSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSG 265
Query: 499 NGARAIELYEQMLKEGILP-DRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDH 557
A E++ +++K ++ + IT TVL A +H+G ++ G+ +H ED
Sbjct: 266 MSNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGK----CIHDQVIRMGLEDD 321
Query: 558 Y---ARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLF 614
ID+ C+ G+ A+ D + K + W A++AG +HG+ A +
Sbjct: 322 VIVGTSIIDMYCKCGRVETARKAFDRMKNK-NVRSWTAMIAGYGMHGH-------AAKAL 373
Query: 615 QLMP 618
+L P
Sbjct: 374 ELFP 377
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/337 (22%), Positives = 139/337 (41%), Gaps = 80/337 (23%)
Query: 33 LARSVHAHMISSGFKPREHIINRLIDIYCKSLK--LVYARTLFDEIPQPDIVARTTLIAA 90
L S+H+ +I GF + N L+D Y K + + AR +FD+I D V+
Sbjct: 201 LTESIHSFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVS------- 253
Query: 91 YSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNF 150
YN++++ Y+ + + A E+FR + VK
Sbjct: 254 --------------------------YNSIMSVYAQSGMSNEAFEVFRRL----VKNKVV 283
Query: 151 TFTSVLSALALIVEEEKQCMQ----MHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSS 206
TF ++ + L+ ++ +H V++ G V ++I +Y KC
Sbjct: 284 TFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC-------- 335
Query: 207 RSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGY 266
+ AR+ FD M ++ SWT M+ GY + + A E M ++ GV N +
Sbjct: 336 -GRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDS-GVRPNYI---- 389
Query: 267 VHRELKMLMLRIQLDEFTYTSVISACANSGLFRLG-KQVHAYLLRTEAKPTPEFSLPVNN 325
T+ SV++AC+++GL G + +A R +P E
Sbjct: 390 -----------------TFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHY----G 428
Query: 326 ALVTLYWKCGKVNEARDIFNQMPER-DLVSWNAILSA 361
+V L + G + +A D+ +M + D + W+++L+A
Sbjct: 429 CMVDLLGRAGFLQKAYDLIQRMKMKPDSIIWSSLLAA 465
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 253/786 (32%), Positives = 412/786 (52%), Gaps = 79/786 (10%)
Query: 11 TLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYAR 70
T AN +L C N I + +HAH++ + + + + + S+ L YA
Sbjct: 10 TAANTILEKLSFCKSLNHI-----KQLHAHILRTVINHKLNSFLFNLSVSSSSINLSYAL 64
Query: 71 TLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNG 130
+F IP P +++ +N + S +S
Sbjct: 65 NVFSSIPSPP--------------------------------ESIVFNPFLRDLSRSSEP 92
Query: 131 HAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNA 190
A I ++ +R + D F+F +L A++ V + M++H K T V
Sbjct: 93 RATILFYQRIRHVGGRLDQFSFLPILKAVSK-VSALFEGMELHGVAFKIATLCDPFVETG 151
Query: 191 LISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDG 250
+ +Y C + AR VFDEM RD ++W TM+ Y + +D A + +
Sbjct: 152 FMDMYASC---------GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVDEAFKLFEE 202
Query: 251 MSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLR 310
M ++ + DE +++SAC +G R + ++ +L+
Sbjct: 203 MKDS----------------------NVMPDEMILCNIVSACGRTGNMRYNRAIYEFLIE 240
Query: 311 TEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDE 370
+ + + ALVT+Y G ++ AR+ F +M R+L A++S Y G +D+
Sbjct: 241 NDVR----MDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 371 AKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAG 430
A+ +F+ +++L+ WT MIS ++ Y +E L++F +M G KP + I++CA
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 431 LGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAM 490
LG L+ + +H+ + +G +S LS NALI MYA+CG ++A VF MP + VSW++M
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKCGGLDATRDVFEKMPRRNVVSWSSM 416
Query: 491 IAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYG 550
I AL HG + A+ L+ +M +E + P+ +TF+ VL C+H+GLV+EG++ F +M Y
Sbjct: 417 INALSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGCSHSGLVEEGKKIFASMTDEYN 476
Query: 551 IPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAA 610
I P +HY +DL RA EA +VI+S+P + IW +L++ CRIHG ++LG AA
Sbjct: 477 ITPKLEHYGCMVDLFGRANLLREALEVIESMPVASNVVIWGSLMSACRIHGELELGKFAA 536
Query: 611 EQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVF 670
+++ +L P H G VL+SN+YA RW+D +R++M ++ V KE G S I+ + K H F
Sbjct: 537 KRILELEPDHDGALVLMSNIYAREQRWEDVRNIRRVMEEKNVFKEKGLSRIDQNGKSHEF 596
Query: 671 LVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAF 730
L+ D H ++ +Y L+++V +++ GYVPD VL D+E ++K+ + HSEKLA+ F
Sbjct: 597 LIGDKRHKQSNEIYAKLDEVVSKLKLAGYVPDCGSVLVDVEEEEKKDLVLWHSEKLALCF 656
Query: 731 GLM------KLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKC 784
GLM + +R++KNLR+C DCH FK +SKV REI+VRD RFH +++G C
Sbjct: 657 GLMNEEKEEEKDSCGVIRIVKNLRVCEDCHLFFKLVSKVYEREIIVRDRTRFHCYKNGLC 716
Query: 785 SCGDYW 790
SC DYW
Sbjct: 717 SCRDYW 722
>sp|O23266|PP308_ARATH Pentatricopeptide repeat-containing protein At4g14050,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H13 PE=2
SV=3
Length = 612
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 230/624 (36%), Positives = 361/624 (57%), Gaps = 41/624 (6%)
Query: 172 MHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTM 231
+H +VK G + N L++VY KC ++ A +VFDEMP RD ++W ++
Sbjct: 25 LHAHIVKLGIVQCCPLANTLVNVYGKCGAASH---------ALQVFDEMPHRDHIAWASV 75
Query: 232 MTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISA 291
+T + + L G + ++ D+F +++++ A
Sbjct: 76 LTALNQAN--------LSGKT-------------LSVFSSVGSSSGLRPDDFVFSALVKA 114
Query: 292 CANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERD 351
CAN G G+QVH + + +E V ++LV +Y KCG +N A+ +F+ + ++
Sbjct: 115 CANLGSIDHGRQVHCHFIVSEYANDE----VVKSSLVDMYAKCGLLNSAKAVFDSIRVKN 170
Query: 352 LVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRL 411
+SW A++S Y +G +EA LF + +NL SWT +ISG Q+G G E +F++MR
Sbjct: 171 TISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRR 230
Query: 412 EGFKPCD-YAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVE 470
E D + + +CA L A GRQ+H ++ G+DS + NALI MYA+C V
Sbjct: 231 ERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVI 290
Query: 471 AANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACN 530
AA +F+ M + D VSW ++I + QHG +A+ LY+ M+ G+ P+ +TF+ ++ AC+
Sbjct: 291 AAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACS 350
Query: 531 HAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIW 590
H G V++GR F++M YGI P HY +DLL R+G EA+++I ++PF P P W
Sbjct: 351 HVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTW 410
Query: 591 EALLAGCRIHGNIDLGIQAAEQL---FQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLM 647
ALL+ C+ G +GI+ A+ L F+L TY+LLSN+YA+ W + R+ +
Sbjct: 411 AALLSACKRQGRGQMGIRIADHLVSSFKLKD--PSTYILLSNIYASASLWGKVSEARRKL 468
Query: 648 RDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMR-KLGYVPDTKFV 706
+ V+K+PG S +EV + VF +T+HP + +++ L++L EMR + GYVPDT ++
Sbjct: 469 GEMEVRKDPGHSSVEVRKETEVFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWI 528
Query: 707 LHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGR 766
LHDM+ +KE L HSE+ AVA+GL+K G +R++KNLR+CGDCH K +S++ R
Sbjct: 529 LHDMDEQEKEKLLFWHSERSAVAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITER 588
Query: 767 EIVVRDGKRFHHFRDGKCSCGDYW 790
EI+VRD R+HHF+ GKCSC D+W
Sbjct: 589 EIIVRDATRYHHFKGGKCSCNDFW 612
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 141/550 (25%), Positives = 244/550 (44%), Gaps = 96/550 (17%)
Query: 12 LANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYART 71
L Y QLQLC +T+ A+++HAH++ G + N L+++Y K +A
Sbjct: 2 LIPHYLHQLQLCARNRTLTT--AKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQ 59
Query: 72 LFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGH 131
+FDE+P D +A +++ A + + N +G
Sbjct: 60 VFDEMPHRDHIAWASVLTALNQA--------------------------------NLSGK 87
Query: 132 AAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNAL 191
++PD+F F++++ A A + + Q+HC + S V ++L
Sbjct: 88 TLSVFSSVGSSSGLRPDDFVFSALVKACANLGSID-HGRQVHCHFIVSEYANDEVVKSSL 146
Query: 192 ISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGM 251
+ +Y KC L+ +A+ VFD + ++ +SWT M++GY K+ + A E +
Sbjct: 147 VDMYAKC---------GLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEEALELFRIL 197
Query: 252 SENVGVAWNALISGYVHR-----------ELKMLMLRIQLDEFTYTSVISACANSGLFRL 300
+W ALISG+V E++ + I LD +S++ ACAN
Sbjct: 198 PVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDI-LDPLVLSSIVGACANLAASIA 256
Query: 301 GKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILS 360
G+QVH ++ + + ++NAL+ +Y KC V A+DIF++M RD+VSW
Sbjct: 257 GRQVHGLVIALGF----DSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSW----- 307
Query: 361 AYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYA 420
T +I G+AQ+G E+ L L+ M G KP +
Sbjct: 308 --------------------------TSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVT 341
Query: 421 FAGAITSCAGLGALENGRQLHAQLVHS-GYDSSLSAGNALITMYARCGVVEAANCVFNTM 479
F G I +C+ +G +E GR+L + G SL L+ + R G+++ A + +TM
Sbjct: 342 FVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTM 401
Query: 480 P-NVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFL---TVLSACNHAGLV 535
P D +W A+++A + G G I + + ++ L D T++ + ++ + G V
Sbjct: 402 PFPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKV 461
Query: 536 KEGRRYFETM 545
E RR M
Sbjct: 462 SEARRKLGEM 471
Score = 71.2 bits (173), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 90/195 (46%), Gaps = 13/195 (6%)
Query: 428 CAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSW 487
CA L + LHA +V G N L+ +Y +CG A VF+ MP+ D ++W
Sbjct: 13 CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAW 72
Query: 488 NAMIAALGQHGNGARAIELYEQMLKEGIL-PDRITFLTVLSACNHAGLVKEGRRYFETMH 546
+++ AL Q + + ++ + L PD F ++ AC + G + GR+ +H
Sbjct: 73 ASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ----VH 128
Query: 547 GPYGIPP---GEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNI 603
+ + E + +D+ + G + AK V DS+ K + W A+++G G
Sbjct: 129 CHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTIS-WTAMVSGYAKSGR- 186
Query: 604 DLGIQAAEQLFQLMP 618
+ A +LF+++P
Sbjct: 187 ---KEEALELFRILP 198
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 255/784 (32%), Positives = 398/784 (50%), Gaps = 135/784 (17%)
Query: 91 YSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNF 150
Y+ ++K A +F++ +K+ +F+N ++ + + + +I LF+ M V+ D++
Sbjct: 139 YTNCGDLKEASRVFDE--VKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSY 196
Query: 151 TFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLM 210
TF+ CVS F S RS+
Sbjct: 197 TFS--------------------------------------------CVSKSFSSLRSVH 212
Query: 211 GAARR----VFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGY 266
G + + ER+ + +++ Y+KN +D+AR+ D M+E ++WN++I+GY
Sbjct: 213 GGEQLHGFILKSGFGERNSVG-NSLVAFYLKNQRVDSARKVFDEMTERDVISWNSIINGY 271
Query: 267 VHREL---------KMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTP 317
V L +ML+ I++D T SV + CA+S L LG+ VH+ ++
Sbjct: 272 VSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRED 331
Query: 318 EFSLPVNNALVTLYWKC-------------------------------GKVNEARDIFNQ 346
F N L+ +Y KC G EA +F +
Sbjct: 332 RFC----NTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 387
Query: 347 MPER---------------------------------------DLVSWNAILSAYVSAGL 367
M E D+ NA++ Y G
Sbjct: 388 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 447
Query: 368 IDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEG-FKPCDYAFAGAIT 426
+ EA+ +F MR ++++SW +I G ++N Y E L LF+ + E F P + A +
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 507
Query: 427 SCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVS 486
+CA L A + GR++H ++ +GY S N+L+ MYA+CG + A+ +F+ + + D VS
Sbjct: 508 ACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVS 567
Query: 487 WNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMH 546
W MIA G HG G AI L+ QM + GI D I+F+++L AC+H+GLV EG R+F M
Sbjct: 568 WTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMR 627
Query: 547 GPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLG 606
I P +HYA +D+L R G +A I+++P P A IW ALL GCRIH ++ L
Sbjct: 628 HECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLA 687
Query: 607 IQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNK 666
+ AE++F+L P + G YVL++N+YA +W+ R+RK + RG++K PGCSWIE+ +
Sbjct: 688 EKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGR 747
Query: 667 VHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKL 726
V++F+ D+++PE + + +L ++ M + GY P TK+ L D E +KE AL HSEKL
Sbjct: 748 VNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKL 807
Query: 727 AVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSC 786
A+A G++ G +RV KNLR+CGDCH KFMSK+ REIV+RD RFH F+DG CSC
Sbjct: 808 AMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSC 867
Query: 787 GDYW 790
+W
Sbjct: 868 RGFW 871
Score = 137 bits (346), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 108/388 (27%), Positives = 173/388 (44%), Gaps = 78/388 (20%)
Query: 32 SLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAY 91
SL R+VH+ + + F + N L+D+Y K L A+ +F E+
Sbjct: 313 SLGRAVHSIGVKACFSREDRFCNTLLDMYSKCGDLDSAKAVFREMSD------------- 359
Query: 92 SASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFT 151
R V Y +MI Y+ A++LF +M + + PD +T
Sbjct: 360 --------------------RSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYT 399
Query: 152 FTSVLSALA--LIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSL 209
T+VL+ A +++E K ++H + ++ G V NAL+ +Y KC S
Sbjct: 400 VTAVLNCCARYRLLDEGK---RVHEWIKENDLGFDIFVSNALMDMYAKCGS--------- 447
Query: 210 MGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHR 269
M A VF EM +D +SW T++ GY KN Y + A + + E
Sbjct: 448 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEK-------------- 493
Query: 270 ELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFS-LPVNNALV 328
R DE T V+ ACA+ F G+++H Y++R FS V N+LV
Sbjct: 494 -------RFSPDERTVACVLPACASLSAFDKGREIHGYIMR-----NGYFSDRHVANSLV 541
Query: 329 TLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMR----ERNLL 384
+Y KCG + A +F+ + +DLVSW +++ Y G EA +LF MR E + +
Sbjct: 542 DMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEI 601
Query: 385 SWTVMISGLAQNGYGEEGLKLFSQMRLE 412
S+ ++ + +G +EG + F+ MR E
Sbjct: 602 SFVSLLYACSHSGLVDEGWRFFNIMRHE 629
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 70/145 (48%), Gaps = 16/145 (11%)
Query: 28 PITSSLA-----RSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIV 82
P +SL+ R +H +++ +G+ H+ N L+D+Y K L+ A LFD+I D+V
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLV 566
Query: 83 ARTTLIAAYSASDNVKLAREMFNKTPLKMR------DTVFYNAMITAYSHNSNGHAAIEL 136
+ T +IA Y K A +FN +MR D + + +++ A SH+
Sbjct: 567 SWTVMIAGYGMHGFGKEAIALFN----QMRQAGIEADEISFVSLLYACSHSGLVDEGWRF 622
Query: 137 FRDMRRD-DVKPDNFTFTSVLSALA 160
F MR + ++P + ++ LA
Sbjct: 623 FNIMRHECKIEPTVEHYACIVDMLA 647
Score = 50.8 bits (120), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 63/120 (52%), Gaps = 4/120 (3%)
Query: 428 CAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSW 487
CA +L++G+++ + +G+ + G+ L MY CG ++ A+ VF+ + ++ W
Sbjct: 104 CADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASRVFDEVKIEKALFW 163
Query: 488 NAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHG 547
N ++ L + G+ + +I L+++M+ G+ D TF V + + V G E +HG
Sbjct: 164 NILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGG----EQLHG 219
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 446 bits (1147), Expect = e-124, Method: Compositional matrix adjust.
Identities = 242/697 (34%), Positives = 389/697 (55%), Gaps = 61/697 (8%)
Query: 109 LKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQ 168
LK + + ++I ++ S A+ F +MR PD+ F SVL + +++ + +
Sbjct: 65 LKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMM-DLRF 123
Query: 169 CMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPER----- 223
+H +V+ G NAL+++Y K + + S+ +G VFDEMP+R
Sbjct: 124 GESVHGFIVRLGMDCDLYTGNALMNMYAKLLG---MGSKISVG---NVFDEMPQRTSNSG 177
Query: 224 -DELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHR---ELKMLMLR-- 277
+++ T + + +D+ R + M V++N +I+GY E + M+R
Sbjct: 178 DEDVKAETCIMPF----GIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM 233
Query: 278 ----IQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWK 333
++ D FT +SV+ + GK++H Y++R + + + ++LV +Y K
Sbjct: 234 GTTDLKPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGI----DSDVYIGSSLVDMYAK 289
Query: 334 CGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGL 393
++ ++ +F+++ RD +SWN++++ YV
Sbjct: 290 SARIEDSERVFSRLYCRDGISWNSLVAGYV------------------------------ 319
Query: 394 AQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSL 453
QNG E L+LF QM KP AF+ I +CA L L G+QLH ++ G+ S++
Sbjct: 320 -QNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSNI 378
Query: 454 SAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKE 513
+AL+ MY++CG ++AA +F+ M +D VSW A+I HG+G A+ L+E+M ++
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQ 438
Query: 514 GILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSE 573
G+ P+++ F+ VL+AC+H GLV E YF +M YG+ +HYA DLL RAGK E
Sbjct: 439 GVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEE 498
Query: 574 AKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYAN 633
A + I + +P+ +W LL+ C +H N++L + AE++F + + G YVL+ NMYA+
Sbjct: 499 AYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTVDSENMGAYVLMCNMYAS 558
Query: 634 LGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLE 693
GRW + A++R MR +G++K+P CSWIE+ NK H F+ D +HP + ++L+ ++ +
Sbjct: 559 NGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDKINEFLKAVMEQ 618
Query: 694 MRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDC 753
M K GYV DT VLHD++ + K L HSE+LAVAFG++ G T+RV KN+RIC DC
Sbjct: 619 MEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDC 678
Query: 754 HNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
H A KF+SK+ REI+VRD RFHHF G CSCGDYW
Sbjct: 679 HVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 131/511 (25%), Positives = 223/511 (43%), Gaps = 92/511 (18%)
Query: 33 LARSVHAHMISSGFKPREHIINRLIDIYCKSLKL---VYARTLFDEIPQ-------PDIV 82
SVH ++ G + N L+++Y K L + + +FDE+PQ D+
Sbjct: 123 FGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVK 182
Query: 83 ARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRR 142
A T ++ + R +F P K D V YN +I Y+ + A+ + R+M
Sbjct: 183 AETCIMPF-----GIDSVRRVFEVMPRK--DVVSYNTIIAGYAQSGMYEDALRMVREMGT 235
Query: 143 DDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSP 202
D+KPD+FT +SVL + V+ K ++H V++ G + ++L+ +Y K
Sbjct: 236 TDLKPDSFTLSSVLPIFSEYVDVIKG-KEIHGYVIRKGIDSDVYIGSSLVDMYAK----- 289
Query: 203 FVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKND-YLDAAREFLDGMSENVGVAWNA 261
S+R + + RVF + RD +SW +++ GYV+N Y +A R F
Sbjct: 290 --SAR--IEDSERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLF-------------- 331
Query: 262 LISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSL 321
+M+ +++ ++SVI ACA+ LGKQ+H Y+LR ++
Sbjct: 332 ---------RQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGS----NI 378
Query: 322 PVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRER 381
+ +ALV +Y KCG + AR IF++M D VSW AI+ + G EA SLFE
Sbjct: 379 FIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALHGHGHEAVSLFE----- 433
Query: 382 NLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLH 441
+M+ +G KP AF +T+C+ +G ++
Sbjct: 434 --------------------------EMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYF 467
Query: 442 AQLVHS-GYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVS-WNAMIAALGQHGN 499
+ G + L A+ + R G +E A + M + S W+ ++++ H N
Sbjct: 468 NSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKN 527
Query: 500 GARAIELYEQMLKEGILPDRITFLTVLSACN 530
+EL E++ ++ D + CN
Sbjct: 528 ----LELAEKVAEKIFTVDSENMGAYVLMCN 554
Score = 74.3 bits (181), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 123/300 (41%), Gaps = 46/300 (15%)
Query: 354 SWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEG 413
S + ++S Y + L+ EA LF+ ++ +L+W +I + L F +MR G
Sbjct: 41 SASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASG 100
Query: 414 FKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYAR-CGV---- 468
P F + SC + L G +H +V G D L GNAL+ MYA+ G+
Sbjct: 101 RCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKI 160
Query: 469 --------------------VEAANC-----------VFNTMPNVDSVSWNAMIAALGQH 497
V+A C VF MP D VS+N +IA Q
Sbjct: 161 SVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQS 220
Query: 498 GNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDH 557
G A+ + +M + PD T +VL + V +G+ +HG Y I G D
Sbjct: 221 GMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKGKE----IHG-YVIRKGIDS 275
Query: 558 ----YARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQL 613
+ +D+ ++ + +++ V L + W +L+AG +G + ++ Q+
Sbjct: 276 DVYIGSSLVDMYAKSARIEDSERVFSRLYCRDGIS-WNSLVAGYVQNGRYNEALRLFRQM 334
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/220 (24%), Positives = 98/220 (44%), Gaps = 17/220 (7%)
Query: 436 NGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALG 495
+QLHAQ + + S SA + +I++Y ++ A +F T+ + ++W ++I
Sbjct: 23 QAKQLHAQFIRTQSLSHTSA-SIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFT 81
Query: 496 QHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHG-------P 548
++A+ + +M G PD F +VL +C + R+ E++HG
Sbjct: 82 DQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT----MMMDLRFGESVHGFIVRLGMD 137
Query: 549 YGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQ 608
+ G + LL K S +V D +P + S E + A I + GI
Sbjct: 138 CDLYTGNALMNMYAKLLGMGSKIS-VGNVFDEMPQRTSNSGDEDVKAETCI---MPFGID 193
Query: 609 AAEQLFQLMPHH-AGTYVLLSNMYANLGRWDDAARVRKLM 647
+ ++F++MP +Y + YA G ++DA R+ + M
Sbjct: 194 SVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREM 233
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 444 bits (1142), Expect = e-123, Method: Compositional matrix adjust.
Identities = 256/735 (34%), Positives = 396/735 (53%), Gaps = 85/735 (11%)
Query: 64 LKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVF-YNAMIT 122
LK ++AR L + + T LI A S+ ++ AR++F+ P R +F +NA+I
Sbjct: 37 LKQIHARLLVLGLQFSGFLI-TKLIHASSSFGDITFARQVFDDLP---RPQIFPWNAIIR 92
Query: 123 AYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQM----HCTVVK 178
YS N++ A+ ++ +M+ V PD+FTF +L A + + +QM H V +
Sbjct: 93 GYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSH-----LQMGRFVHAQVFR 147
Query: 179 SGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFD--EMPERDELSWTTMMTGYV 236
G V N LI++Y KC +G+AR VF+ +PER +SWT +++ Y
Sbjct: 148 LGFDADVFVQNGLIALYAKC---------RRLGSARTVFEGLPLPERTIVSWTAIVSAYA 198
Query: 237 KNDYLDAAREFLDGMSE-NVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANS 295
+N A E M + +V W AL+S L+ FT C
Sbjct: 199 QNGEPMEALEIFSQMRKMDVKPDWVALVS--------------VLNAFT-------CLQD 237
Query: 296 GLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSW 355
+ G+ +HA +++ + P+ + +N T+Y KCG+V A+ +F++M +L+ W
Sbjct: 238 --LKQGRSIHASVVKMGLEIEPDLLISLN----TMYAKCGQVATAKILFDKMKSPNLILW 291
Query: 356 NAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFK 415
NA++S Y G Y E + +F +M + +
Sbjct: 292 NAMISGYAKNG-------------------------------YAREAIDMFHEMINKDVR 320
Query: 416 PCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCV 475
P + AI++CA +G+LE R ++ + S Y + +ALI M+A+CG VE A V
Sbjct: 321 PDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLV 380
Query: 476 FNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLV 535
F+ + D V W+AMI G HG AI LY M + G+ P+ +TFL +L ACNH+G+V
Sbjct: 381 FDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNHSGMV 440
Query: 536 KEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLA 595
+EG +F M + I P + HYA IDLL RAG +A +VI +P +P +W ALL+
Sbjct: 441 REGWWFFNRM-ADHKINPQQQHYACVIDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLS 499
Query: 596 GCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKE 655
C+ H +++LG AA+QLF + P + G YV LSN+YA WD A VR M+++G+ K+
Sbjct: 500 ACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWDRVAEVRVRMKEKGLNKD 559
Query: 656 PGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQK 715
GCSW+EV ++ F V D +HP + + + +E + +++ G+V + LHD+ ++
Sbjct: 560 VGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGGFVANKDASLHDLNDEEA 619
Query: 716 EYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKR 775
E L +HSE++A+A+GL+ P G +R+ KNLR C +CH A K +SK+V REIVVRD R
Sbjct: 620 EETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATKLISKLVDREIVVRDTNR 679
Query: 776 FHHFRDGKCSCGDYW 790
FHHF+DG CSCGDYW
Sbjct: 680 FHHFKDGVCSCGDYW 694
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 139/331 (41%), Gaps = 74/331 (22%)
Query: 34 ARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSA 93
RS+HA ++ G + ++ L +Y K ++ A+ LFD++ P+++ +I+ Y+
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYA- 299
Query: 94 SDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHA--AIELFRDMRRDDVKPDNFT 151
NG+A AI++F +M DV+PD +
Sbjct: 300 ----------------------------------KNGYAREAIDMFHEMINKDVRPDTIS 325
Query: 152 FTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMG 211
TS +SA A + E Q M+ V +S + +ALI ++ KC S +
Sbjct: 326 ITSAISACAQVGSLE-QARSMYEYVGRSDYRDDVFISSALIDMFAKCGS---------VE 375
Query: 212 AARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHREL 271
AR VFD +RD + W+ M+ GY L G + + A+ G VH
Sbjct: 376 GARLVFDRTLDRDVVVWSAMIVGY-----------GLHGRAREAISLYRAMERGGVHP-- 422
Query: 272 KMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLY 331
++ T+ ++ AC +SG+ R G + + P + V + L
Sbjct: 423 ---------NDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACV----IDLL 469
Query: 332 WKCGKVNEARDIFNQMPERDLVS-WNAILSA 361
+ G +++A ++ MP + V+ W A+LSA
Sbjct: 470 GRAGHLDQAYEVIKCMPVQPGVTVWGALLSA 500
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 441 bits (1134), Expect = e-123, Method: Compositional matrix adjust.
Identities = 214/522 (40%), Positives = 325/522 (62%), Gaps = 10/522 (1%)
Query: 271 LKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTL 330
+++L I +EFT++S++ +C+ + GK +H ++L+ P V LV +
Sbjct: 119 VQLLSSEINPNEFTFSSLLKSCST----KSGKLIHTHVLKFGLGIDPY----VATGLVDV 170
Query: 331 YWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMI 390
Y K G V A+ +F++MPER LVS A+++ Y G ++ A++LF++M ER+++SW VMI
Sbjct: 171 YAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMI 230
Query: 391 SGLAQNGYGEEGLKLFSQMRLEGF-KPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGY 449
G AQ+G+ + L LF ++ EG KP + A+++C+ +GALE GR +H + S
Sbjct: 231 DGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRI 290
Query: 450 DSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQ 509
++ LI MY++CG +E A VFN P D V+WNAMIA HG A+ L+ +
Sbjct: 291 RLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNE 350
Query: 510 MLK-EGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRA 568
M G+ P ITF+ L AC HAGLV EG R FE+M YGI P +HY + LL RA
Sbjct: 351 MQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRA 410
Query: 569 GKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLS 628
G+ A + I ++ + +W ++L C++HG+ LG + AE L L ++G YVLLS
Sbjct: 411 GQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIKNSGIYVLLS 470
Query: 629 NMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLE 688
N+YA++G ++ A+VR LM+++G+ KEPG S IE++NKVH F D H +++ +Y L
Sbjct: 471 NIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSKSKEIYTMLR 530
Query: 689 QLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLR 748
++ ++ GYVP+T VL D+E +KE +L HSE+LA+A+GL+ G+ +++ KNLR
Sbjct: 531 KISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGSPLKIFKNLR 590
Query: 749 ICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
+C DCH K +SK+ GR+IV+RD RFHHF DG CSCGD+W
Sbjct: 591 VCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 166 bits (419), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 117/437 (26%), Positives = 201/437 (45%), Gaps = 68/437 (15%)
Query: 90 AYSASDNVKLAREMFNKT--PLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKP 147
AY++ ++ + +F++T P D + A I S N A L+ + ++ P
Sbjct: 73 AYASHGKIRHSLALFHQTIDP----DLFLFTAAINTASINGLKDQAFLLYVQLLSSEINP 128
Query: 148 DNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSR 207
+ FTF+S+L + + K +H V+K G G+ V L+ VY K VS
Sbjct: 129 NEFTFSSLLKSCS-----TKSGKLIHTHVLKFGLGIDPYVATGLVDVYAK--GGDVVS-- 179
Query: 208 SLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYV 267
A++VFD MPER +S T M+T Y K ++AAR D M E V+WN +I GY
Sbjct: 180 -----AQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYA 234
Query: 268 HREL--KMLMLRIQL--------DEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTP 317
LML +L DE T + +SAC+ G G+ +H ++ + +
Sbjct: 235 QHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIR--- 291
Query: 318 EFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEA 377
++ V L+ +Y KCG + EA +FN P +D+V+WNA+++ Y
Sbjct: 292 -LNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGY--------------- 335
Query: 378 MRERNLLSWTVMISGLAQNGYGEEGLKLFSQMR-LEGFKPCDYAFAGAITSCAGLGALEN 436
A +GY ++ L+LF++M+ + G +P D F G + +CA G +
Sbjct: 336 ----------------AMHGYSQDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNE 379
Query: 437 GRQLHAQLVHS-GYDSSLSAGNALITMYARCGVVEAA-NCVFNTMPNVDSVSWNAMIAAL 494
G ++ + G + L+++ R G ++ A + N + DSV W++++ +
Sbjct: 380 GIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSC 439
Query: 495 GQHGNGARAIELYEQML 511
HG+ E+ E ++
Sbjct: 440 KLHGDFVLGKEIAEYLI 456
Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 155/349 (44%), Gaps = 46/349 (13%)
Query: 16 YASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDE 75
++S L+ C ++ + +H H++ G ++ L+D+Y K +V A+ +FD
Sbjct: 133 FSSLLKSCSTKS------GKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDR 186
Query: 76 IPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIE 135
+P+ +V+ T +I Y+ NV+ AR +F+ + RD V +N MI Y+ + + A+
Sbjct: 187 MPERSLVSSTAMITCYAKQGNVEAARALFDS--MCERDIVSWNVMIDGYAQHGFPNDALM 244
Query: 136 LFRDMRRD-DVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISV 194
LF+ + + KPD T + LSA + I E +H V S L V LI +
Sbjct: 245 LFQKLLAEGKPKPDEITVVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGLIDM 303
Query: 195 YVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSEN 254
Y KC S + A VF++ P +D ++W M+ GY + Y A + M
Sbjct: 304 YSKCGS---------LEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGI 354
Query: 255 VGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEA- 313
G +Q + T+ + ACA++GL G ++ + +
Sbjct: 355 TG---------------------LQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGI 393
Query: 314 KPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMP-ERDLVSWNAILSA 361
KP E LV+L + G++ A + M + D V W+++L +
Sbjct: 394 KPKIEHY----GCLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGS 438
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 102/384 (26%), Positives = 162/384 (42%), Gaps = 56/384 (14%)
Query: 316 TPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLV------SWNAIL-SAYVSAGLI 368
T F LP L L K V+E I + +L+ N L AY S G I
Sbjct: 21 TARFRLPPPEKLAVLIDKSQSVDEVLQIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKI 80
Query: 369 DEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSC 428
+ +LF + +L +T I+ + NG ++ L+ Q+ P ++ F+ + SC
Sbjct: 81 RHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSC 140
Query: 429 AGLGALENGRQLHAQLVHSGY-------------------------------DSSLSAGN 457
+ ++G+ +H ++ G + SL +
Sbjct: 141 ----STKSGKLIHTHVLKFGLGIDPYVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSST 196
Query: 458 ALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGI-L 516
A+IT YA+ G VEAA +F++M D VSWN MI QHG A+ L++++L EG
Sbjct: 197 AMITCYAKQGNVEAARALFDSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPK 256
Query: 517 PDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKD 576
PD IT + LSAC+ G ++ G R+ I ID+ + G EA
Sbjct: 257 PDEITVVAALSACSQIGALETG-RWIHVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVL 315
Query: 577 VIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAG------TYVLLSNM 630
V + P K W A++AG +HG Q A +LF M G T++
Sbjct: 316 VFNDTPRKDIVA-WNAMIAGYAMHGY----SQDALRLFNEMQGITGLQPTDITFIGTLQA 370
Query: 631 YANLGRWDDAARVRKLM-RDRGVK 653
A+ G ++ R+ + M ++ G+K
Sbjct: 371 CAHAGLVNEGIRIFESMGQEYGIK 394
Score = 39.7 bits (91), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 29/225 (12%)
Query: 463 YARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITF 522
YA G + + +F+ + D + A I +G +A LY Q+L I P+ TF
Sbjct: 74 YASHGKIRHSLALFHQTIDPDLFLFTAAINTASINGLKDQAFLLYVQLLSSEINPNEFTF 133
Query: 523 LTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYAR--FIDLLCRAGKFSEAKDVIDS 580
++L +C+ K G + T +G+ G D Y +D+ + G A+ V D
Sbjct: 134 SSLLKSCS----TKSG-KLIHTHVLKFGL--GIDPYVATGLVDVYAKGGDVVSAQKVFDR 186
Query: 581 LPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLM-PHHAGTYVLLSNMYANLGRWDD 639
+P + S A++ GN ++AA LF M ++ ++ + YA G +D
Sbjct: 187 MPER-SLVSSTAMITCYAKQGN----VEAARALFDSMCERDIVSWNVMIDGYAQHGFPND 241
Query: 640 AARVRKLMRDRGVKKEP----------GCSWI---EVDNKVHVFL 671
A + + + G K +P CS I E +HVF+
Sbjct: 242 ALMLFQKLLAEG-KPKPDEITVVAALSACSQIGALETGRWIHVFV 285
>sp|Q9FJY7|PP449_ARATH Pentatricopeptide repeat-containing protein At5g66520
OS=Arabidopsis thaliana GN=PCMP-H61 PE=2 SV=1
Length = 620
Score = 440 bits (1132), Expect = e-122, Method: Compositional matrix adjust.
Identities = 236/627 (37%), Positives = 353/627 (56%), Gaps = 33/627 (5%)
Query: 165 EEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERD 224
++++ Q+H ++K+G + + +S C+SS +S + A+ VFD D
Sbjct: 26 KQEELKQIHARMLKTGLMQDSYAITKFLSF---CISS---TSSDFLPYAQIVFDGFDRPD 79
Query: 225 ELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFT 284
W M+ G+ +D + R L + L S H + +T
Sbjct: 80 TFLWNLMIRGFSCSD--EPERSLL--------LYQRMLCSSAPH------------NAYT 117
Query: 285 YTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIF 344
+ S++ AC+N F Q+HA + K E + N+L+ Y G A +F
Sbjct: 118 FPSLLKACSNLSAFEETTQIHAQI----TKLGYENDVYAVNSLINSYAVTGNFKLAHLLF 173
Query: 345 NQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLK 404
+++PE D VSWN+++ YV AG +D A +LF M E+N +SWT MISG Q +E L+
Sbjct: 174 DRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEKNAISWTTMISGYVQADMNKEALQ 233
Query: 405 LFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYA 464
LF +M+ +P + + A A+++CA LGALE G+ +H+ L + G LI MYA
Sbjct: 234 LFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYA 293
Query: 465 RCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLT 524
+CG +E A VF + +W A+I+ HG+G AI + +M K GI P+ ITF
Sbjct: 294 KCGEMEEALEVFKNIKKKSVQAWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTA 353
Query: 525 VLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFK 584
VL+AC++ GLV+EG+ F +M Y + P +HY +DLL RAG EAK I +P K
Sbjct: 354 VLTACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLK 413
Query: 585 PSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVR 644
P+A IW ALL CRIH NI+LG + E L + P+H G YV +N++A +WD AA R
Sbjct: 414 PNAVIWGALLKACRIHKNIELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAAETR 473
Query: 645 KLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTK 704
+LM+++GV K PGCS I ++ H FL D +HPE + + + ++ + GYVP+ +
Sbjct: 474 RLMKEQGVAKVPGCSTISLEGTTHEFLAGDRSHPEIEKIQSKWRIMRRKLEENGYVPELE 533
Query: 705 FVLHDM-ESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKV 763
+L D+ + D++E + HSEKLA+ +GL+K G +R++KNLR+C DCH K +SK+
Sbjct: 534 EMLLDLVDDDEREAIVHQHSEKLAITYGLIKTKPGTIIRIMKNLRVCKDCHKVTKLISKI 593
Query: 764 VGREIVVRDGKRFHHFRDGKCSCGDYW 790
R+IV+RD RFHHFRDGKCSCGDYW
Sbjct: 594 YKRDIVMRDRTRFHHFRDGKCSCGDYW 620
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 117/507 (23%), Positives = 212/507 (41%), Gaps = 101/507 (19%)
Query: 18 SQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLK---LVYARTLFD 74
S LQ C + + + +HA M+ +G + I + + S L YA+ +FD
Sbjct: 19 SCLQRCSKQEEL-----KQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFD 73
Query: 75 EIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAI 134
+PD T +N MI +S + ++
Sbjct: 74 GFDRPD---------------------------------TFLWNLMIRGFSCSDEPERSL 100
Query: 135 ELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISV 194
L++ M + +TF S+L A + + E + Q+H + K G +N+LI+
Sbjct: 101 LLYQRMLCSSAPHNAYTFPSLLKACSNLSAFE-ETTQIHAQITKLGYENDVYAVNSLINS 159
Query: 195 YVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSEN 254
Y V+ F A +FD +PE D++SW +++ GYVK +D A M+E
Sbjct: 160 YA--VTGNF-------KLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALTLFRKMAEK 210
Query: 255 VGVAWNALISGYVHRELKMLMLR---------IQLDEFTYTSVISACANSGLFRLGKQVH 305
++W +ISGYV ++ L+ ++ D + + +SACA G GK +H
Sbjct: 211 NAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGALEQGKWIH 270
Query: 306 AYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSA 365
+YL +T + + L+ +Y KCG++ EA ++F + ++ + +W A++S Y
Sbjct: 271 SYLNKTRIR----MDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQAWTALISGY--- 323
Query: 366 GLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAI 425
A +G+G E + F +M+ G KP F +
Sbjct: 324 ----------------------------AYHGHGREAISKFMEMQKMGIKPNVITFTAVL 355
Query: 426 TSCAGLGALENGRQLHAQLVHS-GYDSSLSAGNALITMYARCGVVEAANCVFNTMP-NVD 483
T+C+ G +E G+ + + ++ ++ + R G+++ A MP +
Sbjct: 356 TACSYTGLVEEGKLIFYSMERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMPLKPN 415
Query: 484 SVSWNAMIAALGQHGNGARAIELYEQM 510
+V W A++ A H N IEL E++
Sbjct: 416 AVIWGALLKACRIHKN----IELGEEI 438
Score = 103 bits (257), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/308 (23%), Positives = 132/308 (42%), Gaps = 40/308 (12%)
Query: 333 KCGKVNEARDIFNQMPERDLVSWNAILSAYVS-------AGLIDEAKSLFEAMRERNLLS 385
+C K E + I +M + L+ + ++ ++S + + A+ +F+ +
Sbjct: 23 RCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSDFLPYAQIVFDGFDRPDTFL 82
Query: 386 WTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLV 445
W +MI G + + E L L+ +M Y F + +C+ L A E Q+HAQ+
Sbjct: 83 WNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQIHAQIT 142
Query: 446 HSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNA---------------- 489
GY++ + A N+LI YA G + A+ +F+ +P D VSWN+
Sbjct: 143 KLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPDDVSWNSVIKGYVKAGKMDIALT 202
Query: 490 ---------------MIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGL 534
MI+ Q A++L+ +M + PD ++ LSAC G
Sbjct: 203 LFRKMAEKNAISWTTMISGYVQADMNKEALQLFHEMQNSDVEPDNVSLANALSACAQLGA 262
Query: 535 VKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALL 594
+++G ++ + I ID+ + G+ EA +V ++ K S W AL+
Sbjct: 263 LEQG-KWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIK-KKSVQAWTALI 320
Query: 595 AGCRIHGN 602
+G HG+
Sbjct: 321 SGYAYHGH 328
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 231/637 (36%), Positives = 365/637 (57%), Gaps = 48/637 (7%)
Query: 171 QMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTT 230
Q+H +KSG T ++ C +S + R L A ++F++MP+R+ SW T
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRF---CATSD-LHHRDL-DYAHKIFNQMPQRNCFSWNT 95
Query: 231 MMTGYVKNDY---LDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTS 287
++ G+ ++D L A F + MS+ ++ + FT+ S
Sbjct: 96 IIRGFSESDEDKALIAITLFYEMMSDEF----------------------VEPNRFTFPS 133
Query: 288 VISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIF-NQ 346
V+ ACA +G + GKQ+H L+ EF V + LV +Y CG + +AR +F
Sbjct: 134 VLKACAKTGKIQEGKQIHGLALKY-GFGGDEF---VMSNLVRMYVMCGFMKDARVLFYKN 189
Query: 347 MPERDLVS-------------WNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGL 393
+ E+D+V WN ++ Y+ G A+ LF+ MR+R+++SW MISG
Sbjct: 190 IIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGY 249
Query: 394 AQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSL 453
+ NG+ ++ +++F +M+ +P + + + LG+LE G LH SG
Sbjct: 250 SLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDD 309
Query: 454 SAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKE 513
G+ALI MY++CG++E A VF +P + ++W+AMI HG AI+ + +M +
Sbjct: 310 VLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQA 369
Query: 514 GILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSE 573
G+ P + ++ +L+AC+H GLV+EGRRYF M G+ P +HY +DLL R+G E
Sbjct: 370 GVRPSDVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDE 429
Query: 574 AKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYAN 633
A++ I ++P KP IW+ALL CR+ GN+++G + A L ++PH +G YV LSNMYA+
Sbjct: 430 AEEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYAS 489
Query: 634 LGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLE 693
G W + + +R M+++ ++K+PGCS I++D +H F+V+D +HP+A+ + L ++ +
Sbjct: 490 QGNWSEVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEISDK 549
Query: 694 MRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDC 753
+R GY P T VL ++E + KE L HSEK+A AFGL+ G +R++KNLRIC DC
Sbjct: 550 LRLAGYRPITTQVLLNLEEEDKENVLHYHSEKIATAFGLISTSPGKPIRIVKNLRICEDC 609
Query: 754 HNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
H++ K +SKV R+I VRD KRFHHF+DG CSC DYW
Sbjct: 610 HSSIKLISKVYKRKITVRDRKRFHHFQDGSCSCMDYW 646
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 127/490 (25%), Positives = 215/490 (43%), Gaps = 98/490 (20%)
Query: 36 SVHAHMISSGFKPREHIINRLIDIYCKS-----LKLVYARTLFDEIPQPDIVARTTLIAA 90
+HA I SG + R+ + I +C + L YA +F+++PQ + + T+I
Sbjct: 41 QIHAVFIKSG-QMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRG 99
Query: 91 YSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDD-VKPDN 149
+S SD K A+I AI LF +M D+ V+P+
Sbjct: 100 FSESDEDK--------------------ALI-----------AITLFYEMMSDEFVEPNR 128
Query: 150 FTFTSVLSALALI--VEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKC---VSSPFV 204
FTF SVL A A ++E K Q+H +K G G V++ L+ +YV C + +
Sbjct: 129 FTFPSVLKACAKTGKIQEGK---QIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVL 185
Query: 205 SSRSLMGAARRVFDEMPERDE--LSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNAL 262
++++ V + +RD + W M+ GY++ AAR D M + V+WN +
Sbjct: 186 FYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTM 245
Query: 263 ISGY-----------VHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRT 311
ISGY V RE+K +R T SV+ A + G LG+ +H Y +
Sbjct: 246 ISGYSLNGFFKDAVEVFREMKKGDIRPNY--VTLVSVLPAISRLGSLELGEWLHLYAEDS 303
Query: 312 EAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEA 371
+ + +AL+ +Y KCG + +A +F ++P ++++W+A
Sbjct: 304 GIR----IDDVLGSALIDMYSKCGIIEKAIHVFERLPRENVITWSA-------------- 345
Query: 372 KSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGL 431
MI+G A +G + + F +MR G +P D A+ +T+C+
Sbjct: 346 -----------------MINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHG 388
Query: 432 GALENGRQLHAQLVH-SGYDSSLSAGNALITMYARCGVVEAANCVFNTMP-NVDSVSWNA 489
G +E GR+ +Q+V G + + ++ + R G+++ A MP D V W A
Sbjct: 389 GLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKA 448
Query: 490 MIAALGQHGN 499
++ A GN
Sbjct: 449 LLGACRMQGN 458
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/375 (23%), Positives = 164/375 (43%), Gaps = 56/375 (14%)
Query: 16 YASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLF-D 74
+ S L+ C I + +H + GF E +++ L+ +Y + AR LF
Sbjct: 131 FPSVLKACAKTGKIQE--GKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYK 188
Query: 75 EIPQPDIVART-------------TLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMI 121
I + D+V T +I Y + K AR +F+K ++ R V +N MI
Sbjct: 189 NIIEKDMVVMTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDK--MRQRSVVSWNTMI 246
Query: 122 TAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGT 181
+ YS N A+E+FR+M++ D++P+ T SVL A++ + E +H SG
Sbjct: 247 SGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELG-EWLHLYAEDSGI 305
Query: 182 GLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYL 241
+ + +ALI +Y KC ++ A VF+ +P + ++W+ M+ G+
Sbjct: 306 RIDDVLGSALIDMYSKC---------GIIEKAIHVFERLPRENVITWSAMINGF------ 350
Query: 242 DAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLG 301
+ G A + KM ++ + Y ++++AC++ GL G
Sbjct: 351 --------AIHGQAGDAIDCF--------CKMRQAGVRPSDVAYINLLTACSHGGLVEEG 394
Query: 302 KQVHAYLLRTEA-KPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPER-DLVSWNAIL 359
++ + ++ + +P E +V L + G ++EA + MP + D V W A+L
Sbjct: 395 RRYFSQMVSVDGLEPRIEHY----GCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALL 450
Query: 360 SAYVSAGLIDEAKSL 374
A G ++ K +
Sbjct: 451 GACRMQGNVEMGKRV 465
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 439 bits (1128), Expect = e-122, Method: Compositional matrix adjust.
Identities = 259/816 (31%), Positives = 414/816 (50%), Gaps = 103/816 (12%)
Query: 26 RNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVART 85
R+ S LA++ HA +I GF+ ++ +L + YAR +F + +PD+
Sbjct: 29 RSTSISHLAQT-HAQIILHGFRNDISLLTKLTQRLSDLGAIYYARDIFLSVQRPDVF--- 84
Query: 86 TLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRD-D 144
+N ++ +S N + H+++ +F +R+ D
Sbjct: 85 ------------------------------LFNVLMRGFSVNESPHSSLSVFAHLRKSTD 114
Query: 145 VKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFV 204
+KP++ T+ +SA A +++ +H V G + + ++ +Y K
Sbjct: 115 LKPNSSTYAFAISA-ASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWR---- 169
Query: 205 SSRSLMGAARRVFDEMPERDELSWTTMMTGYVKND-YLDAAREFLDGMSENVGVAWNALI 263
+ AR+VFD MPE+D + W TM++GY KN+ Y+++ + F D ++E+ +
Sbjct: 170 -----VEDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTL 224
Query: 264 SGYVHR--ELKMLMLRIQLD-----------EFTYTSVISACANSGLFRLGKQVHAYLLR 310
+ EL+ L L +Q+ ++ T IS + G ++G + L R
Sbjct: 225 LDILPAVAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMG----SALFR 280
Query: 311 TEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQM-------PERDLVSW-------- 355
KP + NA++ Y G+ + +F ++ LVS
Sbjct: 281 EFRKP----DIVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM 336
Query: 356 ---------------------NAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLA 394
A+ + Y I+ A+ LF+ E++L SW MISG
Sbjct: 337 LIYAIHGYCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYT 396
Query: 395 QNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLS 454
QNG E+ + LF +M+ F P +++CA LGAL G+ +H + + ++SS+
Sbjct: 397 QNGLTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIY 456
Query: 455 AGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEG 514
ALI MYA+CG + A +F+ M + V+WN MI+ G HG G A+ ++ +ML G
Sbjct: 457 VSTALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSG 516
Query: 515 ILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEA 574
I P +TFL VL AC+HAGLVKEG F +M YG P HYA +D+L RAG A
Sbjct: 517 ITPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRA 576
Query: 575 KDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANL 634
I+++ +P + +WE LL CRIH + +L +E+LF+L P + G +VLLSN+++
Sbjct: 577 LQFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSAD 636
Query: 635 GRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEM 694
+ AA VR+ + R + K PG + IE+ HVF D +HP+ + +Y+ LE+L +M
Sbjct: 637 RNYPQAATVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKM 696
Query: 695 RKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCH 754
R+ GY P+T+ LHD+E +++E + HSE+LA+AFGL+ G +R++KNLR+C DCH
Sbjct: 697 REAGYQPETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCH 756
Query: 755 NAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
K +SK+ R IVVRD RFHHF+DG CSCGDYW
Sbjct: 757 TVTKLISKITERVIVVRDANRFHHFKDGVCSCGDYW 792
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 436 bits (1122), Expect = e-121, Method: Compositional matrix adjust.
Identities = 235/630 (37%), Positives = 350/630 (55%), Gaps = 54/630 (8%)
Query: 171 QMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTT 230
Q+HC +V SG + N L+S+Y K P +A V+ M +++ +S
Sbjct: 65 QLHCLLVVSGFSSDKFICNHLMSMYSKLGDFP---------SAVAVYGRMRKKNYMSSNI 115
Query: 231 MMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHREL---------KMLMLRIQLD 281
++ GYV+ L AR+ D M + WNA+I+G + E +M L D
Sbjct: 116 LINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPD 175
Query: 282 EFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEAR 341
E+T SV S A +G+Q+H Y + K E L VN++L +Y + GK+ +
Sbjct: 176 EYTLGSVFSGSAGLRSVSIGQQIHGYTI----KYGLELDLVVNSSLAHMYMRNGKLQDGE 231
Query: 342 DIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEE 401
+ +M RNL++W +I G AQNG E
Sbjct: 232 IVI-------------------------------RSMPVRNLVAWNTLIMGNAQNGCPET 260
Query: 402 GLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALIT 461
L L+ M++ G +P F ++SC+ L G+Q+HA+ + G S ++ ++LI+
Sbjct: 261 VLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLIS 320
Query: 462 MYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILP-DRI 520
MY++CG + A F+ + D V W++MI+A G HG G AIEL+ M ++ + + +
Sbjct: 321 MYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEV 380
Query: 521 TFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDS 580
FL +L AC+H+GL +G F+ M YG PG HY +DLL RAG +A+ +I S
Sbjct: 381 AFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRS 440
Query: 581 LPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDA 640
+P K IW+ LL+ C IH N ++ + +++ Q+ P+ + YVLL+N++A+ RW D
Sbjct: 441 MPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRDV 500
Query: 641 ARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYV 700
+ VRK MRD+ VKKE G SW E +VH F + D + +++ +Y YL++L LEM+ GY
Sbjct: 501 SEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGYK 560
Query: 701 PDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFM 760
PDT VLHDM+ ++KE L HSEKLAVAF LM LP GA +R++KNLR+C DCH AFK++
Sbjct: 561 PDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKYI 620
Query: 761 SKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
S + REI +RDG RFHHF +GKCSCGDYW
Sbjct: 621 SVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 99/361 (27%), Positives = 174/361 (48%), Gaps = 12/361 (3%)
Query: 277 RIQLDEFTYTSV----ISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYW 332
R +L+ FT TS+ I +C GKQ+H LL + +F + N L+++Y
Sbjct: 35 RFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHC-LLVVSGFSSDKF---ICNHLMSMYS 90
Query: 333 KCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISG 392
K G A ++ +M +++ +S N +++ YV AG + A+ +F+ M +R L +W MI+G
Sbjct: 91 KLGDFPSAVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAG 150
Query: 393 LAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSS 452
L Q + EEGL LF +M GF P +Y + AGL ++ G+Q+H + G +
Sbjct: 151 LIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELD 210
Query: 453 LSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLK 512
L ++L MY R G ++ V +MP + V+WN +I Q+G + LY+ M
Sbjct: 211 LVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKI 270
Query: 513 EGILPDRITFLTVLSACNHAGLVKEGRR-YFETMHGPYGIPPGEDHYARFIDLLCRAGKF 571
G P++ITF+TVLS+C+ + +G++ + E + G + I + + G
Sbjct: 271 SGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAI--KIGASSVVAVVSSLISMYSKCGCL 328
Query: 572 SEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMY 631
+A + +W ++++ HG D I+ + + L+ +Y
Sbjct: 329 GDAAKAFSEREDEDEV-MWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLY 387
Query: 632 A 632
A
Sbjct: 388 A 388
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 117/511 (22%), Positives = 221/511 (43%), Gaps = 82/511 (16%)
Query: 9 IRTLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVY 68
I T + + +Q C R + S + +H ++ SGF + I N L+ +Y K
Sbjct: 40 IFTNTSLFTPFIQSCTTRQSLPS--GKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPS 97
Query: 69 ARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNS 128
A ++ + + + ++ LI Y + ++ AR++F++ P R +NAMI
Sbjct: 98 AVAVYGRMRKKNYMSSNILINGYVRAGDLVNARKVFDEMP--DRKLTTWNAMIAGLIQFE 155
Query: 129 NGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVL 188
+ LFR+M PD +T SV S A + Q+H +K G L V
Sbjct: 156 FNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGL-RSVSIGQQIHGYTIKYGLELDLVVN 214
Query: 189 NALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFL 248
++L +Y++ + V MP R+ ++W T++ G +N
Sbjct: 215 SSLAHMYMR---------NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQN---------- 255
Query: 249 DGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYL 308
G E V Y+++ +K+ R ++ T+ +V+S+C++ + G+Q+HA
Sbjct: 256 -GCPETV---------LYLYKMMKISGCRP--NKITFVTVLSSCSDLAIRGQGQQIHAEA 303
Query: 309 LRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLI 368
+ K + V ++L+++Y KCG + +A F++ + D V W++++SAY G
Sbjct: 304 I----KIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQG 359
Query: 369 DEAKSLFEAMRER-----NLLSWTVMISGLAQNGYGEEGLKLFSQMRLE-GFKPCDYAFA 422
DEA LF M E+ N +++ ++ + +G ++GL+LF M + GFKP
Sbjct: 360 DEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP------ 413
Query: 423 GAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMP-N 481
L ++ + R G ++ A + +MP
Sbjct: 414 -----------------------------GLKHYTCVVDLLGRAGCLDQAEAIIRSMPIK 444
Query: 482 VDSVSWNAMIAALGQHGNGARAIELYEQMLK 512
D V W +++A H N A +++++L+
Sbjct: 445 TDIVIWKTLLSACNIHKNAEMAQRVFKEILQ 475
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 252/719 (35%), Positives = 386/719 (53%), Gaps = 82/719 (11%)
Query: 80 DIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRD 139
++V L+ YS + A+ +F K + V +N M+ +S + H ++ R
Sbjct: 326 ELVLNNALMDMYSKCGCITNAQMIFKMNNNK--NVVSWNTMVGGFSAEGDTHGTFDVLRQ 383
Query: 140 MRR--DDVKPDNFTFTSVLSALALIVEEE--KQCMQMHCTVVKSGTGLFTSVLNALISVY 195
M +DVK D T +L+A+ + E ++HC +K V NA ++ Y
Sbjct: 384 MLAGGEDVKADEVT---ILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFVASY 440
Query: 196 VKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENV 255
KC S + A+RVF + + SW ++ G+ +++ R LD
Sbjct: 441 AKCGSLSY---------AQRVFHGIRSKTVNSWNALIGGHAQSN---DPRLSLDA----- 483
Query: 256 GVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKP 315
L+M + + D FT S++SAC+ RLGK+VH +++R
Sbjct: 484 --------------HLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRN---- 525
Query: 316 TPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLF 375
W ERDL + ++LS Y+ G + ++LF
Sbjct: 526 ----------------W---------------LERDLFVYLSVLSLYIHCGELCTVQALF 554
Query: 376 EAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALE 435
+AM +++L+SW +I+G QNG+ + L +F QM L G + C + +C+ L +L
Sbjct: 555 DAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLR 614
Query: 436 NGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALG 495
GR+ HA + + +LI MYA+ G + ++ VFN + + SWNAMI G
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMIMGYG 674
Query: 496 QHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGE 555
HG AI+L+E+M + G PD +TFL VL+ACNH+GL+ EG RY + M +G+ P
Sbjct: 675 IHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNL 734
Query: 556 DHYARFIDLLCRAGKFSEAKDVI-DSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLF 614
HYA ID+L RAG+ +A V+ + + + IW++LL+ CRIH N+++G + A +LF
Sbjct: 735 KHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLEMGEKVAAKLF 794
Query: 615 QLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDD 674
+L P YVLLSN+YA LG+W+D +VR+ M + ++K+ GCSWIE++ KV F+V +
Sbjct: 795 ELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELNRKVFSFVVGE 854
Query: 675 ---TAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFG 731
E ++++ LE +++ K+GY PDT V HD+ ++K L HSEKLA+ +G
Sbjct: 855 RFLDGFEEIKSLWSILE---MKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSEKLALTYG 911
Query: 732 LMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
L+K G T+RV KNLRIC DCHNA K +SKV+ REIVVRD KRFHHF++G CSCGDYW
Sbjct: 912 LIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 154/662 (23%), Positives = 271/662 (40%), Gaps = 122/662 (18%)
Query: 80 DIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRD 139
D V T +I Y+ + +R +F+ L+ ++ +NA+I++YS N +E F +
Sbjct: 119 DDVLCTRIITMYAMCGSPDDSRFVFD--ALRSKNLFQWNAVISSYSRNELYDEVLETFIE 176
Query: 140 M-RRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKC 198
M D+ PD+FT+ V+ A A + + + +H VVK+G V NAL+S Y
Sbjct: 177 MISTTDLLPDHFTYPCVIKACAGM-SDVGIGLAVHGLVVKTGLVEDVFVGNALVSFY--- 232
Query: 199 VSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVA 258
+ + A ++FD MPER+ +SW +M+ + N + + + L M E G
Sbjct: 233 ------GTHGFVTDALQLFDIMPERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDG 286
Query: 259 WNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPE 318
D T +V+ CA LGK VH + ++
Sbjct: 287 ------------------AFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKLRLDK--- 325
Query: 319 FSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAM 378
L +NNAL+ +Y KCG + A+ IF +++VSWN ++ + + G + F+ +
Sbjct: 326 -ELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEG---DTHGTFDVL 381
Query: 379 RERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGR 438
R+ M++G GE+ K + A+ C L + +
Sbjct: 382 RQ--------MLAG------GED------------VKADEVTILNAVPVCFHESFLPSLK 415
Query: 439 QLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHG 498
+LH + + + NA + YA+CG + A VF+ + + SWNA+I Q
Sbjct: 416 ELHCYSLKQEFVYNELVANAFVASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSN 475
Query: 499 NGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDH- 557
+ +++ + QM G+LPD T ++LSAC+ ++ G+ +HG + I +
Sbjct: 476 DPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKE----VHG-FIIRNWLERD 530
Query: 558 ---YARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQL- 613
Y + L G+ + + D++ K S W ++ G +G D + Q+
Sbjct: 531 LFVYLSVLSLYIHCGELCTVQALFDAMEDK-SLVSWNTVITGYLQNGFPDRALGVFRQMV 589
Query: 614 --------FQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRD---------------- 649
+MP +L S LGR A ++ L+ D
Sbjct: 590 LYGIQLCGISMMPVFGACSLLPS---LRLGREAHAYALKHLLEDDAFIACSLIDMYAKNG 646
Query: 650 ---------RGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYV 700
G+K++ SW + ++ H A+ K E EM++ G+
Sbjct: 647 SITQSSKVFNGLKEKSTASW-------NAMIMGYGIHGLAKEAIKLFE----EMQRTGHN 695
Query: 701 PD 702
PD
Sbjct: 696 PD 697
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 103/443 (23%), Positives = 196/443 (44%), Gaps = 73/443 (16%)
Query: 60 YCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNA 119
+ SLK ++ +L E ++VA +A+Y+ ++ A+ +F+ K ++ +NA
Sbjct: 410 FLPSLKELHCYSLKQEFVYNELVA-NAFVASYAKCGSLSYAQRVFHGIRSKTVNS--WNA 466
Query: 120 MITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKS 179
+I ++ +++ +++ M+ + PD+FT S+LSA + + + + ++H ++++
Sbjct: 467 LIGGHAQSNDPRLSLDAHLQMKISGLLPDSFTVCSLLSACSKL-KSLRLGKEVHGFIIRN 525
Query: 180 GTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKND 239
V +++S+Y+ C + + +FD M ++ +SW T++TGY++N
Sbjct: 526 WLERDLFVYLSVLSLYIHCGE---------LCTVQALFDAMEDKSLVSWNTVITGYLQNG 576
Query: 240 YLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFR 299
+ D A +GV +M++ IQL + V AC+ R
Sbjct: 577 FPDRA----------LGVF------------RQMVLYGIQLCGISMMPVFGACSLLPSLR 614
Query: 300 LGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAIL 359
LG++ HAY L K E + +L+ +Y K G + ++ +FN + E+ SWNA++
Sbjct: 615 LGREAHAYAL----KHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNAMI 670
Query: 360 SAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDY 419
Y GL EA +KLF +M+ G P D
Sbjct: 671 MGYGIHGLAKEA-------------------------------IKLFEEMQRTGHNPDDL 699
Query: 420 AFAGAITSCAGLGALENGRQLHAQLVHS-GYDSSLSAGNALITMYARCGVVEAA-NCVFN 477
F G +T+C G + G + Q+ S G +L +I M R G ++ A V
Sbjct: 700 TFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAE 759
Query: 478 TMPNVDSVS-WNAMIAALGQHGN 499
M V W +++++ H N
Sbjct: 760 EMSEEADVGIWKSLLSSCRIHQN 782
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 80/205 (39%), Gaps = 48/205 (23%)
Query: 33 LARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYS 92
L R HA+ + + I LID+Y K+ + + +F+
Sbjct: 615 LGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFN------------------ 656
Query: 93 ASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTF 152
LK + T +NAMI Y + AI+LF +M+R PD+ TF
Sbjct: 657 ---------------GLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTF 701
Query: 153 TSVLSAL---ALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSL 209
VL+A LI E + QM KS GL ++ + CV + L
Sbjct: 702 LGVLTACNHSGLIHEGLRYLDQM-----KSSFGLKPNL------KHYACVIDMLGRAGQL 750
Query: 210 MGAARRVFDEMPERDELS-WTTMMT 233
A R V +EM E ++ W ++++
Sbjct: 751 DKALRVVAEEMSEEADVGIWKSLLS 775
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 436 bits (1121), Expect = e-121, Method: Compositional matrix adjust.
Identities = 248/687 (36%), Positives = 360/687 (52%), Gaps = 85/687 (12%)
Query: 113 DTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQM 172
+ YN++I + +N H ++LF +R+ + FTF VL A K + +
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTR-ASSRKLGIDL 133
Query: 173 HCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMM 232
H VVK G + + +L+S+Y S + A ++FDE+P+R
Sbjct: 134 HSLVVKCGFNHDVAAMTSLLSIY---------SGSGRLNDAHKLFDEIPDRSV------- 177
Query: 233 TGYVKNDYLDAAREFLDGMSENVGVAWNALISGYV----HREL-----KMLMLRIQLDEF 283
V W AL SGY HRE KM+ + ++ D +
Sbjct: 178 ------------------------VTWTALFSGYTTSGRHREAIDLFKKMVEMGVKPDSY 213
Query: 284 TYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDI 343
V+SAC + G G+ + Y+ E + V LV LY KCGK+ +AR
Sbjct: 214 FIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNS----FVRTTLVNLYAKCGKMEKAR-- 267
Query: 344 FNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGL 403
S+F++M E+++++W+ MI G A N + +EG+
Sbjct: 268 -----------------------------SVFDSMVEKDIVTWSTMIQGYASNSFPKEGI 298
Query: 404 KLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMY 463
+LF QM E KP ++ G ++SCA LGAL+ G + + + ++L NALI MY
Sbjct: 299 ELFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMY 358
Query: 464 ARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFL 523
A+CG + VF M D V NA I+ L ++G+ + ++ Q K GI PD TFL
Sbjct: 359 AKCGAMARGFEVFKEMKEKDIVIMNAAISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFL 418
Query: 524 TVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPF 583
+L C HAGL+++G R+F + Y + +HY +DL RAG +A +I +P
Sbjct: 419 GLLCGCVHAGLIQDGLRFFNAISCVYALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPM 478
Query: 584 KPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARV 643
+P+A +W ALL+GCR+ + L ++L L P +AG YV LSN+Y+ GRWD+AA V
Sbjct: 479 RPNAIVWGALLSGCRLVKDTQLAETVLKELIALEPWNAGNYVQLSNIYSVGGRWDEAAEV 538
Query: 644 RKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDT 703
R +M +G+KK PG SWIE++ KVH FL DD +HP + +Y LE L EMR +G+VP T
Sbjct: 539 RDMMNKKGMKKIPGYSWIELEGKVHEFLADDKSHPLSDKIYAKLEDLGNEMRLMGFVPTT 598
Query: 704 KFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKV 763
+FV D+E ++KE L HSEKLAVA GL+ G +RV+KNLR+CGDCH K +SK+
Sbjct: 599 EFVFFDVEEEEKERVLGYHSEKLAVALGLISTDHGQVIRVVKNLRVCGDCHEVMKLISKI 658
Query: 764 VGREIVVRDGKRFHHFRDGKCSCGDYW 790
REIVVRD RFH F +G CSC DYW
Sbjct: 659 TRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 119/492 (24%), Positives = 200/492 (40%), Gaps = 114/492 (23%)
Query: 30 TSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIA 89
+ L +H+ ++ GF + L+ IY S +L A LFDEIP +V T L +
Sbjct: 126 SRKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFS 185
Query: 90 AYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDN 149
Y+ S RE AI+LF+ M VKPD+
Sbjct: 186 GYTTSGR---HRE------------------------------AIDLFKKMVEMGVKPDS 212
Query: 150 FTFTSVLSALALIVE-EEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRS 208
+ VLSA + + + + + + ++ F V L+++Y KC
Sbjct: 213 YFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSF--VRTTLVNLYAKC---------G 261
Query: 209 LMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVH 268
M AR VFD M E+D ++W+TM+ GY N + E
Sbjct: 262 KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELF-------------------- 301
Query: 269 RELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALV 328
L+ML ++ D+F+ +S+CA+ G LG+ + + R E +L + NAL+
Sbjct: 302 --LQMLQENLKPDQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLT----NLFMANALI 355
Query: 329 TLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTV 388
+Y KCG + ++F +M E+D+V NA
Sbjct: 356 DMYAKCGAMARGFEVFKEMKEKDIVIMNA------------------------------- 384
Query: 389 MISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENG-RQLHAQLVHS 447
ISGLA+NG+ + +F Q G P F G + C G +++G R +A
Sbjct: 385 AISGLAKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVY 444
Query: 448 GYDSSLSAGNALITMYARCGVVEAANCVFNTMP-NVDSVSWNAMIAALGQHGNGARAI-- 504
++ ++ ++ R G+++ A + MP +++ W A+++ G R +
Sbjct: 445 ALKRTVEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLS-------GCRLVKD 497
Query: 505 -ELYEQMLKEGI 515
+L E +LKE I
Sbjct: 498 TQLAETVLKELI 509
Score = 99.0 bits (245), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 128/275 (46%), Gaps = 18/275 (6%)
Query: 374 LFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGA 433
LF + N+ + +I+G N E L LF +R G + F + +C +
Sbjct: 67 LFSHTQFPNIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASS 126
Query: 434 LENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAA 493
+ G LH+ +V G++ ++A +L+++Y+ G + A+ +F+ +P+ V+W A+ +
Sbjct: 127 RKLGIDLHSLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSG 186
Query: 494 LGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGR---RYFETMHGPYG 550
G AI+L+++M++ G+ PD + VLSAC H G + G +Y E M
Sbjct: 187 YTTSGRHREAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQ-- 244
Query: 551 IPPGEDHYAR--FIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQ 608
++ + R ++L + GK +A+ V DS+ K W ++ G + GI+
Sbjct: 245 ----KNSFVRTTLVNLYAKCGKMEKARSVFDSMVEKDIVT-WSTMIQGYASNSFPKEGIE 299
Query: 609 AAEQLFQ--LMPHHAGTYVLLSNMYA----NLGRW 637
Q+ Q L P LS+ + +LG W
Sbjct: 300 LFLQMLQENLKPDQFSIVGFLSSCASLGALDLGEW 334
>sp|Q9SV26|PP297_ARATH Pentatricopeptide repeat-containing protein At4g01030,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H65 PE=3
SV=2
Length = 768
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 253/812 (31%), Positives = 412/812 (50%), Gaps = 102/812 (12%)
Query: 33 LARSVHAHMISSGFKPRE-HIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAY 91
L ++H +I G + +++ + Y + + L +A LFDE+P+
Sbjct: 5 LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEMPK------------- 51
Query: 92 SASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFT 151
RD + +N ++ + N A+ELFR+M+ K + T
Sbjct: 52 --------------------RDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDST 91
Query: 152 FTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMG 211
+L + E + Q+H V++ G S+ N+LI +Y S +
Sbjct: 92 MVKLLQVCS-NKEGFAEGRQIHGYVLRLGLESNVSMCNSLIVMY---------SRNGKLE 141
Query: 212 AARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLD-----GMSENVGVAWNALISGY 266
+R+VF+ M +R+ SW ++++ Y K Y+D A LD G+ ++ V WN+L+SGY
Sbjct: 142 LSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEMEICGLKPDI-VTWNSLLSGY 200
Query: 267 VHREL---------KMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTP 317
+ L +M + ++ + +S++ A A G +LGK +H Y+LR +
Sbjct: 201 ASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHLKLGKAIHGYILRNQL---- 256
Query: 318 EFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSL--- 374
+ + V L+ +Y K G + AR +F+ M +++V+WN+++S A L+ +A++L
Sbjct: 257 WYDVYVETTLIDMYIKTGYLPYARMVFDMMDAKNIVAWNSLVSGLSYACLLKDAEALMIR 316
Query: 375 --------------------------------FEAMRER----NLLSWTVMISGLAQNGY 398
M+E+ N++SWT + SG ++NG
Sbjct: 317 MEKEGIKPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGN 376
Query: 399 GEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNA 458
LK+F +M+ EG P + + L L +G+++H + A
Sbjct: 377 FRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATA 436
Query: 459 LITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPD 518
L+ MY + G +++A +F + N SWN M+ G G I + ML+ G+ PD
Sbjct: 437 LVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPD 496
Query: 519 RITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVI 578
ITF +VLS C ++GLV+EG +YF+ M YGI P +H + +DLL R+G EA D I
Sbjct: 497 AITFTSVLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFI 556
Query: 579 DSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWD 638
++ KP A IW A L+ C+IH +++L A ++L L PH++ Y+++ N+Y+NL RW+
Sbjct: 557 QTMSLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWE 616
Query: 639 DAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLG 698
D R+R LMR+ V+ + SWI++D VH+F + HP+ +Y L +LV EM+K G
Sbjct: 617 DVERIRNLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSG 676
Query: 699 YVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFK 758
YVPDT + D+ +KE L H+EKLA+ +GL+K G A +RV+KN IC D H K
Sbjct: 677 YVPDTSCIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAK 736
Query: 759 FMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
+MS + REIV+++G R HHFRDGKCSC D W
Sbjct: 737 YMSVLRNREIVLQEGARVHHFRDGKCSCNDSW 768
>sp|Q9FG16|PP367_ARATH Pentatricopeptide repeat-containing protein At5g06540
OS=Arabidopsis thaliana GN=PCMP-H88 PE=2 SV=1
Length = 622
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 210/520 (40%), Positives = 323/520 (62%), Gaps = 5/520 (0%)
Query: 272 KMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLY 331
+ML RI D T+ +I A + +G+Q H+ ++R + + V N+LV +Y
Sbjct: 107 QMLKSRIWPDNITFPFLIKASSEMECVLVGEQTHSQIVRFGFQN----DVYVENSLVHMY 162
Query: 332 WKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMIS 391
CG + A IF QM RD+VSW ++++ Y G+++ A+ +F+ M RNL +W++MI+
Sbjct: 163 ANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMIN 222
Query: 392 GLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDS 451
G A+N E+ + LF M+ EG + I+SCA LGALE G + + +V S
Sbjct: 223 GYAKNNCFEKAIDLFEFMKREGVVANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTV 282
Query: 452 SLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQML 511
+L G AL+ M+ RCG +E A VF +P DS+SW+++I L HG+ +A+ + QM+
Sbjct: 283 NLILGTALVDMFWRCGDIEKAIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMI 342
Query: 512 KEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKF 571
G +P +TF VLSAC+H GLV++G +E M +GI P +HY +D+L RAGK
Sbjct: 343 SLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKL 402
Query: 572 SEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMY 631
+EA++ I + KP+API ALL C+I+ N ++ + L ++ P H+G YVLLSN+Y
Sbjct: 403 AEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIY 462
Query: 632 ANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLV-DDTAHPEAQAVYKYLEQL 690
A G+WD +R +M+++ VKK PG S IE+D K++ F + DD HPE + + E++
Sbjct: 463 ACAGQWDKIESLRDMMKEKLVKKPPGWSLIEIDGKINKFTMGDDQKHPEMGKIRRKWEEI 522
Query: 691 VLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRIC 750
+ ++R +GY +T D++ ++KE ++ HSEKLA+A+G+MK G T+R++KNLR+C
Sbjct: 523 LGKIRLIGYKGNTGDAFFDVDEEEKESSIHMHSEKLAIAYGMMKTKPGTTIRIVKNLRVC 582
Query: 751 GDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
DCH K +S+V GRE++VRD RFHHFR+G CSC DYW
Sbjct: 583 EDCHTVTKLISEVYGRELIVRDRNRFHHFRNGVCSCRDYW 622
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 107/426 (25%), Positives = 188/426 (44%), Gaps = 66/426 (15%)
Query: 117 YNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCM----QM 172
+N +I +S + A + M + + PDN TF ++ A E +C+ Q
Sbjct: 85 FNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKA-----SSEMECVLVGEQT 139
Query: 173 HCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMM 232
H +V+ G V N+L+ +Y C + AA R+F +M RD +SWT+M+
Sbjct: 140 HSQIVRFGFQNDVYVENSLVHMYANC---------GFIAAAGRIFGQMGFRDVVSWTSMV 190
Query: 233 TGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHR-------ELKMLMLR--IQLDEF 283
GY K ++ ARE D M W+ +I+GY +L M R + +E
Sbjct: 191 AGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANET 250
Query: 284 TYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDI 343
SVIS+CA+ G G++ + Y++++ +L + ALV ++W+CG + +A +
Sbjct: 251 VMVSVISSCAHLGALEFGERAYEYVVKSHMT----VNLILGTALVDMFWRCGDIEKAIHV 306
Query: 344 FNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGL 403
F +PE D +SW++I I GLA +G+ + +
Sbjct: 307 FEGLPETDSLSWSSI-------------------------------IKGLAVHGHAHKAM 335
Query: 404 KLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHS-GYDSSLSAGNALITM 462
FSQM GF P D F +++C+ G +E G +++ + G + L ++ M
Sbjct: 336 HYFSQMISLGFIPRDVTFTAVLSACSHGGLVEKGLEIYENMKKDHGIEPRLEHYGCIVDM 395
Query: 463 YARCG-VVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRIT 521
R G + EA N + ++ A++ A + N A + ++K + P+
Sbjct: 396 LGRAGKLAEAENFILKMHVKPNAPILGALLGACKIYKNTEVAERVGNMLIK--VKPEHSG 453
Query: 522 FLTVLS 527
+ +LS
Sbjct: 454 YYVLLS 459
Score = 98.6 bits (244), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/284 (23%), Positives = 123/284 (43%), Gaps = 39/284 (13%)
Query: 367 LIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAIT 426
L+ A +F ++ NL + ++I + + ++QM P + F I
Sbjct: 66 LLGYAYGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIK 125
Query: 427 SCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVS 486
+ + + + G Q H+Q+V G+ + + N+L+ MYA CG + AA +F M D VS
Sbjct: 126 ASSEMECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS 185
Query: 487 WNAMIAALGQHG------------------------NG-------ARAIELYEQMLKEGI 515
W +M+A + G NG +AI+L+E M +EG+
Sbjct: 186 WTSMVAGYCKCGMVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 516 LPDRITFLTVLSACNHAGLVKEGRRYFETM---HGPYGIPPGEDHYARFIDLLCRAGKFS 572
+ + ++V+S+C H G ++ G R +E + H + G +D+ R G
Sbjct: 246 VANETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILG----TALVDMFWRCGDIE 301
Query: 573 EAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQL 616
+A V + LP S W +++ G +HG+ + Q+ L
Sbjct: 302 KAIHVFEGLPETDSLS-WSSIIKGLAVHGHAHKAMHYFSQMISL 344
Score = 93.6 bits (231), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 147/315 (46%), Gaps = 37/315 (11%)
Query: 33 LARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYS 92
+ H+ ++ GF+ ++ N L+ +Y + A +F ++ D+V+ T+++A Y
Sbjct: 135 VGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVSWTSMVAGYC 194
Query: 93 ASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTF 152
V+ AREMF++ P R+ ++ MI Y+ N+ AI+LF M+R+ V +
Sbjct: 195 KCGMVENAREMFDEMP--HRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGVVANETVM 252
Query: 153 TSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGA 212
SV+S+ A + E + + VVKS + + AL+ ++ +C +
Sbjct: 253 VSVISSCAHLGALEFG-ERAYEYVVKSHMTVNLILGTALVDMFWRCGD---------IEK 302
Query: 213 ARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELK 272
A VF+ +PE D LSW++++ G + + A + M + G++ R++
Sbjct: 303 AIHVFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQM----------ISLGFIPRDV- 351
Query: 273 MLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYW 332
T+T+V+SAC++ GL G +++ + + E L +V +
Sbjct: 352 -----------TFTAVLSACSHGGLVEKGLEIYENMKKDHG---IEPRLEHYGCIVDMLG 397
Query: 333 KCGKVNEARDIFNQM 347
+ GK+ EA + +M
Sbjct: 398 RAGKLAEAENFILKM 412
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 64/304 (21%), Positives = 121/304 (39%), Gaps = 32/304 (10%)
Query: 475 VFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGL 534
+F+ + N + +N +I ++A Y QMLK I PD ITF ++ A +
Sbjct: 73 IFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEMEC 132
Query: 535 VKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALL 594
V G + + +G + + G + A + + F+ W +++
Sbjct: 133 VLVGEQTHSQI-VRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRDVVS-WTSMV 190
Query: 595 AG-CRIHGNIDLGIQAAEQLFQLMPH-HAGTYVLLSNMYANLGRWDDAARVRKLMRDRGV 652
AG C+ ++ A ++F MPH + T+ ++ N YA ++ A + + M+ GV
Sbjct: 191 AGYCKCG-----MVENAREMFDEMPHRNLFTWSIMINGYAKNNCFEKAIDLFEFMKREGV 245
Query: 653 KKEPGCSWIEVDNKVHVFLVDDTAHPEA----QAVYKYLEQLVLEMRKLGYVPDTKFVLH 708
+ V V ++ AH A + Y+Y +V + + T V
Sbjct: 246 V---------ANETVMVSVISSCAHLGALEFGERAYEY---VVKSHMTVNLILGTALV-- 291
Query: 709 DMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREI 768
DM + + H V GL + + ++K L + G H A + S+++
Sbjct: 292 DMFWRCGDIEKAIH-----VFEGLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGF 346
Query: 769 VVRD 772
+ RD
Sbjct: 347 IPRD 350
>sp|Q9LTF4|PP429_ARATH Putative pentatricopeptide repeat-containing protein At5g52630
OS=Arabidopsis thaliana GN=PCMP-H52 PE=3 SV=1
Length = 588
Score = 433 bits (1113), Expect = e-120, Method: Compositional matrix adjust.
Identities = 240/621 (38%), Positives = 354/621 (57%), Gaps = 67/621 (10%)
Query: 170 MQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWT 229
+Q+H VVKSG L V N LI+ Y K PF S RR F++ P++ +W+
Sbjct: 35 LQLHGYVVKSGLSLIPLVANNLINFYSKS-QLPFDS--------RRAFEDSPQKSSTTWS 85
Query: 230 TMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVI 289
++++ + +N+ + EFL KM+ ++ D+ S
Sbjct: 86 SIISCFAQNELPWMSLEFLK----------------------KMMAGNLRPDDHVLPSAT 123
Query: 290 SACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPE 349
+CA +G+ VH ++T + + V ++LV +Y KCG++ AR +F++MP+
Sbjct: 124 KSCAILSRCDIGRSVHCLSMKT----GYDADVFVGSSLVDMYAKCGEIVYARKMFDEMPQ 179
Query: 350 RDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQM 409
R++V+W+ ++ Y AQ G EE L LF +
Sbjct: 180 RNVVTWSGMMYGY-------------------------------AQMGENEEALWLFKEA 208
Query: 410 RLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVV 469
E DY+F+ I+ CA LE GRQ+H + S +DSS G++L+++Y++CGV
Sbjct: 209 LFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKSSFDSSSFVGSSLVSLYSKCGVP 268
Query: 470 EAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSAC 529
E A VFN +P + WNAM+ A QH + + IEL+++M G+ P+ ITFL VL+AC
Sbjct: 269 EGAYQVFNEVPVKNLGIWNAMLKAYAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNAC 328
Query: 530 NHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPI 589
+HAGLV EGR YF+ M I P + HYA +D+L RAG+ EA +VI ++P P+ +
Sbjct: 329 SHAGLVDEGRYYFDQMKESR-IEPTDKHYASLVDMLGRAGRLQEALEVITNMPIDPTESV 387
Query: 590 WEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRD 649
W ALL C +H N +L AA+++F+L P +G ++ LSN YA GR++DAA+ RKL+RD
Sbjct: 388 WGALLTSCTVHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRD 447
Query: 650 RGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHD 709
RG KKE G SW+E NKVH F + H +++ +Y+ L +L EM K GY+ DT +VL +
Sbjct: 448 RGEKKETGLSWVEERNKVHTFAAGERRHEKSKEIYEKLAELGEEMEKAGYIADTSYVLRE 507
Query: 710 MESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIV 769
++ D+K + HSE+LA+AFGL+ P +RV+KNLR+CGDCHNA KFMS R I+
Sbjct: 508 VDGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSVCTRRVII 567
Query: 770 VRDGKRFHHFRDGKCSCGDYW 790
VRD RFH F DGKCSC DYW
Sbjct: 568 VRDNNRFHRFEDGKCSCNDYW 588
Score = 135 bits (341), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 118/490 (24%), Positives = 214/490 (43%), Gaps = 117/490 (23%)
Query: 21 QLCDPRNPITSSLARS------VHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFD 74
Q+CD ++S+ RS +H +++ SG + N LI+ Y KS +R F+
Sbjct: 17 QICDLL--LSSARTRSTIKGLQLHGYVVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFE 74
Query: 75 EIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAI 134
+ PQ +++I+ ++ N+ P ++
Sbjct: 75 DSPQKSSTTWSSIISCFAQ-----------NELPW----------------------MSL 101
Query: 135 ELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQC---MQMHCTVVKSGTGLFTSVLNAL 191
E + M +++PD+ S + A++ +C +HC +K+G V ++L
Sbjct: 102 EFLKKMMAGNLRPDDHVLPSATKSCAIL----SRCDIGRSVHCLSMKTGYDADVFVGSSL 157
Query: 192 ISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGM 251
+ +Y KC + AR++FDEMP+R+ ++W+ MM GY + M
Sbjct: 158 VDMYAKCGEIVY---------ARKMFDEMPQRNVVTWSGMMYGYAQ-------------M 195
Query: 252 SENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRT 311
EN W + +E L + +++++++SVIS CANS L LG+Q+H +++
Sbjct: 196 GENEEALW-------LFKE--ALFENLAVNDYSFSSVISVCANSTLLELGRQIHGLSIKS 246
Query: 312 EAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEA 371
+ V ++LV+LY KCG A +FN++P ++L WNA+L AY
Sbjct: 247 SFDSS----SFVGSSLVSLYSKCGVPEGAYQVFNEVPVKNLGIWNAMLKAY--------- 293
Query: 372 KSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGL 431
AQ+ + ++ ++LF +M+L G KP F + +C+
Sbjct: 294 ----------------------AQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHA 331
Query: 432 GALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVS--WNA 489
G ++ GR Q+ S + + +L+ M R G ++ A V MP +D W A
Sbjct: 332 GLVDEGRYYFDQMKESRIEPTDKHYASLVDMLGRAGRLQEALEVITNMP-IDPTESVWGA 390
Query: 490 MIAALGQHGN 499
++ + H N
Sbjct: 391 LLTSCTVHKN 400
Score = 82.0 bits (201), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/362 (21%), Positives = 159/362 (43%), Gaps = 82/362 (22%)
Query: 3 MKNADYIRTLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCK 62
++ D++ A + + L CD + RSVH + +G+ + + L+D+Y K
Sbjct: 112 LRPDDHVLPSATKSCAILSRCD--------IGRSVHCLSMKTGYDADVFVGSSLVDMYAK 163
Query: 63 SLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMIT 122
++VYAR +FDE+PQ R+ V ++ M+
Sbjct: 164 CGEIVYARKMFDEMPQ---------------------------------RNVVTWSGMMY 190
Query: 123 AYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALA--LIVEEEKQCMQMHCTVVKSG 180
Y+ A+ LF++ +++ ++++F+SV+S A ++E + Q+H +KS
Sbjct: 191 GYAQMGENEEALWLFKEALFENLAVNDYSFSSVISVCANSTLLELGR---QIHGLSIKSS 247
Query: 181 TGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDY 240
+ V ++L+S+Y KC + A +VF+E+P ++ W M+ Y ++ +
Sbjct: 248 FDSSSFVGSSLVSLYSKC---------GVPEGAYQVFNEVPVKNLGIWNAMLKAYAQHSH 298
Query: 241 LDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRL 300
E M +SG ++ + T+ +V++AC+++GL
Sbjct: 299 TQKVIELFKRMK----------LSG------------MKPNFITFLNVLNACSHAGLVDE 336
Query: 301 GKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVS-WNAIL 359
G+ + + +PT + +LV + + G++ EA ++ MP S W A+L
Sbjct: 337 GRYYFDQMKESRIEPTDKHYA----SLVDMLGRAGRLQEALEVITNMPIDPTESVWGALL 392
Query: 360 SA 361
++
Sbjct: 393 TS 394
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 432 bits (1111), Expect = e-120, Method: Compositional matrix adjust.
Identities = 226/571 (39%), Positives = 324/571 (56%), Gaps = 49/571 (8%)
Query: 229 TTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGY----VHR---ELKMLMLR--IQ 279
++ YVK + L+ A + D M + ++W +IS Y +H+ EL +LMLR ++
Sbjct: 100 NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDNVR 159
Query: 280 LDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNE 339
+ +TY+SV+ +C R+ +H CG + E
Sbjct: 160 PNVYTYSSVLRSCNGMSDVRM---LH----------------------------CGIIKE 188
Query: 340 ARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYG 399
E D+ +A++ + G ++A S+F+ M + + W +I G AQN
Sbjct: 189 G-------LESDVFVRSALIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRS 241
Query: 400 EEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNAL 459
+ L+LF +M+ GF + +C GL LE G Q H +V YD L NAL
Sbjct: 242 DVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNAL 299
Query: 460 ITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDR 519
+ MY +CG +E A VFN M D ++W+ MI+ L Q+G A++L+E+M G P+
Sbjct: 300 VDMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNY 359
Query: 520 ITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVID 579
IT + VL AC+HAGL+++G YF +M YGI P +HY IDLL +AGK +A +++
Sbjct: 360 ITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLN 419
Query: 580 SLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDD 639
+ +P A W LL CR+ N+ L AA+++ L P AGTY LLSN+YAN +WD
Sbjct: 420 EMECEPDAVTWRTLLGACRVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDS 479
Query: 640 AARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGY 699
+R MRDRG+KKEPGCSWIEV+ ++H F++ D +HP+ V K L QL+ + +GY
Sbjct: 480 VEEIRTRMRDRGIKKEPGCSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGY 539
Query: 700 VPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKF 759
VP+T FVL D+E +Q E +L HSEKLA+AFGLM LP +R+ KNLRICGDCH K
Sbjct: 540 VPETNFVLQDLEGEQMEDSLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKL 599
Query: 760 MSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
SK+ R IV+RD R+HHF+DGKCSCGDYW
Sbjct: 600 ASKLEIRSIVIRDPIRYHHFQDGKCSCGDYW 630
Score = 149 bits (376), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 122/467 (26%), Positives = 201/467 (43%), Gaps = 113/467 (24%)
Query: 35 RSVHA------HMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLI 88
R+VH H+ +G +P ++N LI++Y K L A LFD++PQ ++++ TT+I
Sbjct: 75 RAVHEGNLICRHLYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMI 134
Query: 89 AAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPD 148
+AYS K + + A+EL M RD+V+P+
Sbjct: 135 SAYS-------------KCKIHQK--------------------ALELLVLMLRDNVRPN 161
Query: 149 NFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRS 208
+T++SVL + + + +HC ++K G V +ALI V+ K + P
Sbjct: 162 VYTYSSVLRSCNGMSDVR----MLHCGIIKEGLESDVFVRSALIDVFAK-LGEP------ 210
Query: 209 LMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVH 268
A VFDEM D + W +++ G+ +N D A E M +G++
Sbjct: 211 --EDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKR----------AGFI- 257
Query: 269 RELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALV 328
++ T TSV+ AC L LG Q H ++++ + L +NNALV
Sbjct: 258 -----------AEQATLTSVLRACTGLALLELGMQAHVHIVKYDQ------DLILNNALV 300
Query: 329 TLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTV 388
+Y KCG + +A +FNQM ERD+++W+ ++S G EA
Sbjct: 301 DMYCKCGSLEDALRVFNQMKERDVITWSTMISGLAQNGYSQEA----------------- 343
Query: 389 MISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVH-S 447
LKLF +M+ G KP G + +C+ G LE+G +
Sbjct: 344 --------------LKLFERMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLY 389
Query: 448 GYDSSLSAGNALITMYARCGVVEAANCVFNTMP-NVDSVSWNAMIAA 493
G D +I + + G ++ A + N M D+V+W ++ A
Sbjct: 390 GIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 436
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/364 (25%), Positives = 152/364 (41%), Gaps = 92/364 (25%)
Query: 7 DYIRTLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKL 66
D +R Y+S L+ C+ + + R +H +I G + + + LID++ K +
Sbjct: 156 DNVRPNVYTYSSVLRSCNGMSDV-----RMLHCGIIKEGLESDVFVRSALIDVFAKLGEP 210
Query: 67 VYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSH 126
A ++FDE+ D + ++I ++
Sbjct: 211 EDALSVFDEMVTGDAIVWNSIIG---------------------------------GFAQ 237
Query: 127 NSNGHAAIELFRDMRRDDVKPDNFTFTSVLSA---LALIVEEEKQCMQMHCTVVKSGTGL 183
NS A+ELF+ M+R + T TSVL A LAL+ + MQ H +VK L
Sbjct: 238 NSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL----ELGMQAHVHIVKYDQDL 293
Query: 184 FTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDA 243
+ NAL+ +Y KC S + A RVF++M ERD ++W+TM++G +N Y
Sbjct: 294 ILN--NALVDMYCKCGS---------LEDALRVFNQMKERDVITWSTMISGLAQNGYSQE 342
Query: 244 AREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQ 303
A + + M + G N + T V+ AC+++GL G
Sbjct: 343 ALKLFERMKSS-GTKPNYI---------------------TIVGVLFACSHAGLLEDG-- 378
Query: 304 VHAYLLRTEAK-----PTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMP-ERDLVSWNA 357
Y R+ K P E ++ L K GK+++A + N+M E D V+W
Sbjct: 379 --WYYFRSMKKLYGIDPVREHY----GCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRT 432
Query: 358 ILSA 361
+L A
Sbjct: 433 LLGA 436
Score = 73.2 bits (178), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 127/313 (40%), Gaps = 62/313 (19%)
Query: 387 TVMISGLAQNGYGEE---GLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQ 443
T+++S + Y + +K ++ G ++ I C A+ G +
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 444 LVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARA 503
L +G+ + N LI MY + ++ A+ +F+ MP + +SW MI+A + +A
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKA 146
Query: 504 IELYEQMLKEGILPDRITFLTVLSACN--------HAGLVKEGRRYFETMHGPYGIPPGE 555
+EL ML++ + P+ T+ +VL +CN H G++KEG
Sbjct: 147 LELLVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLHCGIIKEGLE--------------S 192
Query: 556 DHYAR--FIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQ----- 608
D + R ID+ + G+ +A V D + A +W +++ G + D+ ++
Sbjct: 193 DVFVRSALIDVFAKLGEPEDALSVFDEM-VTGDAIVWNSIIGGFAQNSRSDVALELFKRM 251
Query: 609 -----AAEQ--LFQLMPHHAGTYVL----------------------LSNMYANLGRWDD 639
AEQ L ++ G +L L +MY G +D
Sbjct: 252 KRAGFIAEQATLTSVLRACTGLALLELGMQAHVHIVKYDQDLILNNALVDMYCKCGSLED 311
Query: 640 AARVRKLMRDRGV 652
A RV M++R V
Sbjct: 312 ALRVFNQMKERDV 324
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 244/736 (33%), Positives = 383/736 (52%), Gaps = 87/736 (11%)
Query: 65 KLVYARTL--FDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMIT 122
++V+AR + D P P + LI YS D+ + AR + TP R+ V + ++I+
Sbjct: 26 RVVHARIVKTLDSPPPPFLA--NYLINMYSKLDHPESARLVLRLTP--ARNVVSWTSLIS 81
Query: 123 AYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTG 182
+ N + A+ F +MRR+ V P++FTF A+A + Q+H VK G
Sbjct: 82 GLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASL-RLPVTGKQIHALAVKCGR- 139
Query: 183 LFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKN---- 238
++ V+V C + L AR++FDE+PER+ +W ++ V +
Sbjct: 140 --------ILDVFVGCSAFDMYCKTRLRDDARKLFDEIPERNLETWNAFISNSVTDGRPR 191
Query: 239 DYLDAAREF--LDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSG 296
+ ++A EF +DG ++ T+ + ++AC++
Sbjct: 192 EAIEAFIEFRRIDGHPNSI----------------------------TFCAFLNACSDWL 223
Query: 297 LFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWN 356
LG Q+H +LR+ + + V N L+ Y KC ++ + IF +M +
Sbjct: 224 HLNLGMQLHGLVLRSGF----DTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTK------ 273
Query: 357 AILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKP 416
N +SW +++ QN E+ L+ + R + +
Sbjct: 274 -------------------------NAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVET 308
Query: 417 CDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVF 476
D+ + +++CAG+ LE GR +HA V + + ++ G+AL+ MY +CG +E + F
Sbjct: 309 SDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCGCIEDSEQAF 368
Query: 477 NTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGI--LPDRITFLTVLSACNHAGL 534
+ MP + V+ N++I G A+ L+E+M G P+ +TF+++LSAC+ AG
Sbjct: 369 DEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGA 428
Query: 535 VKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALL 594
V+ G + F++M YGI PG +HY+ +D+L RAG A + I +P +P+ +W AL
Sbjct: 429 VENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQPTISVWGALQ 488
Query: 595 AGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKK 654
CR+HG LG+ AAE LF+L P +G +VLLSN +A GRW +A VR+ ++ G+KK
Sbjct: 489 NACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREELKGVGIKK 548
Query: 655 EPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQ 714
G SWI V N+VH F D +H + + L +L EM GY PD K L+D+E ++
Sbjct: 549 GAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYKPDLKLSLYDLEEEE 608
Query: 715 KEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGK 774
K +S HSEKLA+AFGL+ LP +R+ KNLRICGDCH+ FKF+S V REI+VRD
Sbjct: 609 KAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRDNN 668
Query: 775 RFHHFRDGKCSCGDYW 790
RFH F+DG CSC DYW
Sbjct: 669 RFHRFKDGICSCKDYW 684
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 103/232 (44%), Gaps = 34/232 (14%)
Query: 299 RLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAI 358
RLG+ VHA +++T P P F + N L+ +Y K AR + P R++VSW
Sbjct: 23 RLGRVVHARIVKTLDSPPPPF---LANYLINMYSKLDHPESARLVLRLTPARNVVSW--- 76
Query: 359 LSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCD 418
T +ISGLAQNG+ L F +MR EG P D
Sbjct: 77 ----------------------------TSLISGLAQNGHFSTALVEFFEMRREGVVPND 108
Query: 419 YAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNT 478
+ F A + A L G+Q+HA V G + G + MY + + + A +F+
Sbjct: 109 FTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDE 168
Query: 479 MPNVDSVSWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACN 530
+P + +WNA I+ G AIE + + + P+ ITF L+AC+
Sbjct: 169 IPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACS 220
Score = 67.4 bits (163), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 74/333 (22%), Positives = 132/333 (39%), Gaps = 71/333 (21%)
Query: 32 SLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAY 91
+L +H ++ SGF + N LID Y K ++ + +F E+ + V+ +L+A
Sbjct: 226 NLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVA-- 283
Query: 92 SASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFT 151
AY N A L+ R+D V+ +F
Sbjct: 284 -------------------------------AYVQNHEDEKASVLYLRSRKDIVETSDFM 312
Query: 152 FTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMG 211
+SVLSA A + E +H VK+ V +AL+ +Y KC +
Sbjct: 313 ISSVLSACAGMAGLELG-RSIHAHAVKACVERTIFVGSALVDMYGKC---------GCIE 362
Query: 212 AARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMS-ENVGVAWNALISGYVHRE 270
+ + FDEMPE++ ++ +++ GY +D A + M+ G N +
Sbjct: 363 DSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM-------- 414
Query: 271 LKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEA-KPTPEFSLPVNNALVT 329
T+ S++SAC+ +G G ++ + T +P E + +V
Sbjct: 415 -------------TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHY----SCIVD 457
Query: 330 LYWKCGKVNEARDIFNQMPERDLVS-WNAILSA 361
+ + G V A + +MP + +S W A+ +A
Sbjct: 458 MLGRAGMVERAYEFIKKMPIQPTISVWGALQNA 490
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 426 bits (1095), Expect = e-118, Method: Compositional matrix adjust.
Identities = 231/622 (37%), Positives = 351/622 (56%), Gaps = 63/622 (10%)
Query: 171 QMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPER-DELSWT 229
Q+H ++ G + + L + Y+ + SP M A +VF ++ + + W
Sbjct: 35 QIHAFSIRHGVSISDAELGKHLIFYLVSLPSP-----PPMSYAHKVFSKIEKPINVFIWN 89
Query: 230 TMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVI 289
T++ GY + +G N++ + ++RE+++ L ++ D TY +I
Sbjct: 90 TLIRGYAE-----------------IG---NSISAFSLYREMRVSGL-VEPDTHTYPFLI 128
Query: 290 SACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPE 349
A RLG+ +H+ ++R+ + V N+L+ LY CG V
Sbjct: 129 KAVTTMADVRLGETIHSVVIRSGFGSL----IYVQNSLLHLYANCGDVA----------- 173
Query: 350 RDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQM 409
SAY +F+ M E++L++W +I+G A+NG EE L L+++M
Sbjct: 174 ----------SAY----------KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEM 213
Query: 410 RLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVV 469
+G KP + +++CA +GAL G+++H ++ G +L + N L+ +YARCG V
Sbjct: 214 NSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRV 273
Query: 470 EAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLK-EGILPDRITFLTVLSA 528
E A +F+ M + +SVSW ++I L +G G AIEL++ M EG+LP ITF+ +L A
Sbjct: 274 EEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYA 333
Query: 529 CNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAP 588
C+H G+VKEG YF M Y I P +H+ +DLL RAG+ +A + I S+P +P+
Sbjct: 334 CSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPMQPNVV 393
Query: 589 IWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMR 648
IW LL C +HG+ DL A Q+ QL P+H+G YVLLSNMYA+ RW D ++RK M
Sbjct: 394 IWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKIRKQML 453
Query: 649 DRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLH 708
GVKK PG S +EV N+VH FL+ D +HP++ A+Y L+++ +R GYVP V
Sbjct: 454 RDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQISNVYV 513
Query: 709 DMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREI 768
D+E ++KE A+ HSEK+A+AF L+ P + + V+KNLR+C DCH A K +SKV REI
Sbjct: 514 DVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKVYNREI 573
Query: 769 VVRDGKRFHHFRDGKCSCGDYW 790
VVRD RFHHF++G CSC DYW
Sbjct: 574 VVRDRSRFHHFKNGSCSCQDYW 595
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 187/404 (46%), Gaps = 72/404 (17%)
Query: 100 AREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDD-VKPDNFTFTSVLSA 158
A ++F+K K + +N +I Y+ N +A L+R+MR V+PD T+ ++ A
Sbjct: 72 AHKVFSKIE-KPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKA 130
Query: 159 LALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRVFD 218
+ + + + +H V++SG G V N+L+ +Y C + +A +VFD
Sbjct: 131 VTTMADV-RLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGD---------VASAYKVFD 180
Query: 219 EMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRI 278
+MPE+D ++W +++ G+ +N + A M+ I
Sbjct: 181 KMPEKDLVAWNSVINGFAENGKPEEALALYTEMNSK----------------------GI 218
Query: 279 QLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVN 338
+ D FT S++SACA G LGK+VH Y+++ +L +N L+ LY +CG+V
Sbjct: 219 KPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR----NLHSSNVLLDLYARCGRVE 274
Query: 339 EARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISGLAQNGY 398
EA+ +F++M +++ VSW T +I GLA NG+
Sbjct: 275 EAKTLFDEMVDKNSVSW-------------------------------TSLIVGLAVNGF 303
Query: 399 GEEGLKLFSQMR-LEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHS-GYDSSLSAG 456
G+E ++LF M EG PC+ F G + +C+ G ++ G + ++ + +
Sbjct: 304 GKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHF 363
Query: 457 NALITMYARCGVVEAANCVFNTMP-NVDSVSWNAMIAALGQHGN 499
++ + AR G V+ A +MP + V W ++ A HG+
Sbjct: 364 GCMVDLLARAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGD 407
Score = 90.9 bits (224), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/341 (22%), Positives = 140/341 (41%), Gaps = 68/341 (19%)
Query: 33 LARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYS 92
L ++H+ +I SGF ++ N L+ +Y + A +FD++P+ D+VA
Sbjct: 139 LGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVA--------- 189
Query: 93 ASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTF 152
+N++I ++ N A+ L+ +M +KPD FT
Sbjct: 190 ------------------------WNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTI 225
Query: 153 TSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGA 212
S+LSA A I ++H ++K G N L+ +Y +C +
Sbjct: 226 VSLLSACAKI-GALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYARC---------GRVEE 275
Query: 213 ARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELK 272
A+ +FDEM +++ +SWT+++ G N + A E M G+
Sbjct: 276 AKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPC------------ 323
Query: 273 MLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYW 332
E T+ ++ AC++ G+ + G + Y R + E + +V L
Sbjct: 324 ---------EITFVGILYACSHCGMVKEGFE---YFRRMREEYKIEPRIEHFGCMVDLLA 371
Query: 333 KCGKVNEARDIFNQMP-ERDLVSWNAILSAYVSAGLIDEAK 372
+ G+V +A + MP + ++V W +L A G D A+
Sbjct: 372 RAGQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSDLAE 412
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 64/133 (48%), Gaps = 4/133 (3%)
Query: 32 SLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAY 91
+L + VH +MI G H N L+D+Y + ++ A+TLFDE+ + V+ T+LI
Sbjct: 239 TLGKRVHVYMIKVGLTRNLHSSNVLLDLYARCGRVEEAKTLFDEMVDKNSVSWTSLIVGL 298
Query: 92 SASDNVKLAREMFN---KTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRD-DVKP 147
+ + K A E+F T + + + ++ A SH E FR MR + ++P
Sbjct: 299 AVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEP 358
Query: 148 DNFTFTSVLSALA 160
F ++ LA
Sbjct: 359 RIEHFGCMVDLLA 371
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 426 bits (1094), Expect = e-118, Method: Compositional matrix adjust.
Identities = 217/578 (37%), Positives = 333/578 (57%), Gaps = 44/578 (7%)
Query: 222 ERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLD 281
E D ++ Y K +++ AR+ DGM E V+WN +I Y ++ L I L+
Sbjct: 93 EGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSWNTMIGLYTRNRMESEALDIFLE 152
Query: 282 ---------EFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYW 332
EFT +SV+SAC + K++H ++T + +L V AL+ LY
Sbjct: 153 MRNEGFKFSEFTISSVLSACGVNCDALECKKLHCLSVKT----CIDLNLYVGTALLDLYA 208
Query: 333 KCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWTVMISG 392
KCG +I +A +FE+M++++ ++W+ M++G
Sbjct: 209 KCG-------------------------------MIKDAVQVFESMQDKSSVTWSSMVAG 237
Query: 393 LAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHSGYDSS 452
QN EE L L+ + + + + + I +C+ L AL G+Q+HA + SG+ S+
Sbjct: 238 YVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSN 297
Query: 453 LSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELYEQMLK 512
+ ++ + MYA+CG + + +F+ + + WN +I+ +H + L+E+M +
Sbjct: 298 VFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMILFEKMQQ 357
Query: 513 EGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGEDHYARFIDLLCRAGKFS 572
+G+ P+ +TF ++LS C H GLV+EGRR+F+ M YG+ P HY+ +D+L RAG S
Sbjct: 358 DGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLS 417
Query: 573 EAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVLLSNMYA 632
EA ++I S+PF P+A IW +LLA CR++ N++L AAE+LF+L P +AG +VLLSN+YA
Sbjct: 418 EAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHVLLSNIYA 477
Query: 633 NLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKYLEQLVL 692
+W++ A+ RKL+RD VKK G SWI++ +KVH F V ++ HP + + L+ LV+
Sbjct: 478 ANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICSTLDNLVI 537
Query: 693 EMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKNLRICGD 752
+ RK GY P + LHD+E +KE L HSEKLA+ FGLM LP + VR++KNLRIC D
Sbjct: 538 KFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMKNLRICVD 597
Query: 753 CHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
CH K S R I+VRD RFHHF DG CSCGD+W
Sbjct: 598 CHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 119/491 (24%), Positives = 229/491 (46%), Gaps = 85/491 (17%)
Query: 25 PRNPITSSLARSVHA------HMISSGFKPRE----HIINRLIDIYCKSLKLVYARTLFD 74
PR TSSL+R++ +S G E ++++ ++ + ++ ++ A+
Sbjct: 26 PRRSNTSSLSRNISVLASYDQEEVSPGRYSNEFSNRNLVHEILQLCARNGAVMEAKACHG 85
Query: 75 EIPQPDIVARTTL----IAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNG 130
+I + D+ TL I AYS V+LAR++F+ + R V +N MI Y+ N
Sbjct: 86 KIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFD--GMLERSLVSWNTMIGLYTRNRME 143
Query: 131 HAAIELFRDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNA 190
A+++F +MR + K FT +SVLSA + + +C ++HC VK+ L V A
Sbjct: 144 SEALDIFLEMRNEGFKFSEFTISSVLSACGVNC-DALECKKLHCLSVKTCIDLNLYVGTA 202
Query: 191 LISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDG 250
L+ +Y KC ++ A +VF+ M ++ ++W++M+ GYV+N + A
Sbjct: 203 LLDLYAKC---------GMIKDAVQVFESMQDKSSVTWSSMVAGYVQNKNYEEA------ 247
Query: 251 MSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLR 310
L+ R + ++ ++FT +SVI AC+N GKQ+HA + +
Sbjct: 248 ----------LLLYRRAQR------MSLEQNQFTLSSVICACSNLAALIEGKQMHAVICK 291
Query: 311 TEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDE 370
+ ++ V ++ V +Y KCG + E+ IF+++ E++L WN I+S
Sbjct: 292 SGFGS----NVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIIS---------- 337
Query: 371 AKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAG 430
G A++ +E + LF +M+ +G P + F+ ++ C
Sbjct: 338 ---------------------GFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGH 376
Query: 431 LGALENGRQLHAQLVHS-GYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVS-WN 488
G +E GR+ + + G ++ + ++ + R G++ A + ++P + S W
Sbjct: 377 TGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSIPFDPTASIWG 436
Query: 489 AMIAALGQHGN 499
+++A+ + N
Sbjct: 437 SLLASCRVYKN 447
Score = 67.4 bits (163), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 77/169 (45%), Gaps = 2/169 (1%)
Query: 428 CAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSW 487
CA GA+ + H +++ + ++ N LI Y++CG VE A VF+ M VSW
Sbjct: 71 CARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGMLERSLVSW 130
Query: 488 NAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHG 547
N MI ++ + A++++ +M EG T +VLSAC E ++ +
Sbjct: 131 NTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKK-LHCLSV 189
Query: 548 PYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAG 596
I +DL + G +A V +S+ K S W +++AG
Sbjct: 190 KTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT-WSSMVAG 237
Score = 37.0 bits (84), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/158 (17%), Positives = 61/158 (38%), Gaps = 33/158 (20%)
Query: 1 MMMKNADYIRTLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIY 60
++ + A + N++ +C N + +HA + SGF + + +D+Y
Sbjct: 249 LLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASSAVDMY 308
Query: 61 CKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAM 120
K L + +F E+ + ++ +N +
Sbjct: 309 AKCGSLRESYIIFSEVQEKNL---------------------------------ELWNTI 335
Query: 121 ITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVLSA 158
I+ ++ ++ + LF M++D + P+ TF+S+LS
Sbjct: 336 ISGFAKHARPKEVMILFEKMQQDGMHPNEVTFSSLLSV 373
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 424 bits (1090), Expect = e-117, Method: Compositional matrix adjust.
Identities = 248/779 (31%), Positives = 396/779 (50%), Gaps = 106/779 (13%)
Query: 18 SQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIP 77
S L++C + S VH +++ SG N LID+YCK + + A +FD +P
Sbjct: 11 SILRVCTRKG--LSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSMP 68
Query: 78 QPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELF 137
+ R+ V ++A+++ + N + ++ LF
Sbjct: 69 E---------------------------------RNVVSWSALMSGHVLNGDLKGSLSLF 95
Query: 138 RDMRRDDVKPDNFTFTSVLSALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVK 197
+M R + P+ FTF++ L A L+ EK +Q+H +K G + V N+L+ +Y K
Sbjct: 96 SEMGRQGIYPNEFTFSTNLKACGLLNALEKG-LQIHGFCLKIGFEMMVEVGNSLVDMYSK 154
Query: 198 CVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGV 257
C + A +VF + +R +SW M+ G+V Y A + M E
Sbjct: 155 C---------GRINEAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEA--- 202
Query: 258 AWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTP 317
++ + DEFT TS++ AC+++G+ GKQ+H +L+R+ P
Sbjct: 203 -----------------NIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRS-GFHCP 244
Query: 318 EFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEA 377
S + +LV LY KCG + AR F+
Sbjct: 245 S-SATITGSLVDLYVKCGYLFSARKA-------------------------------FDQ 272
Query: 378 MRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENG 437
++E+ ++SW+ +I G AQ G E + LF +++ + +A + I A L G
Sbjct: 273 IKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQG 332
Query: 438 RQLHAQLVH--SGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALG 495
+Q+ A V SG ++S+ N+++ MY +CG+V+ A F M D +SW +I G
Sbjct: 333 KQMQALAVKLPSGLETSVL--NSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYG 390
Query: 496 QHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMHGPYGIPPGE 555
+HG G +++ ++ +ML+ I PD + +L VLSAC+H+G++KEG F + +GI P
Sbjct: 391 KHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRV 450
Query: 556 DHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQ 615
+HYA +DLL RAG+ EAK +ID++P KP+ IW+ LL+ CR+HG+I+LG + + L +
Sbjct: 451 EHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLR 510
Query: 616 LMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDT 675
+ + YV++SN+Y G W++ R+L +G+KKE G SW+E++ +VH F +
Sbjct: 511 IDAKNPANYVMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGED 570
Query: 676 AHPEAQAVYKYLEQLVLEMR-KLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMK 734
+HP + + L++ +R +LGYV K LHD++ + KE L HSEKLA+ L
Sbjct: 571 SHPLTPVIQETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALAT 630
Query: 735 L---PGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
G T+RV KNLR+C DCH K +SK+ VVRD RFH F DG CSCGDYW
Sbjct: 631 GGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDYW 689
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 423 bits (1088), Expect = e-117, Method: Compositional matrix adjust.
Identities = 251/786 (31%), Positives = 407/786 (51%), Gaps = 116/786 (14%)
Query: 11 TLANRYASQLQLCDPRNPITSSLARSVHAHMISSGFKPREHIINRLIDIYCKSLKLVYAR 70
T + ++ L+ C I+ +++ AHM+ SGF P E ++L+D K + YAR
Sbjct: 63 TTTHNFSQLLRQCIDERSISG--IKTIQAHMLKSGF-PAEISGSKLVDASLKCGDIDYAR 119
Query: 71 TLFDEIPQPDIVARTTLIAAYSASDNVKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNG 130
+FD + + IV +N++I +
Sbjct: 120 QVFDGMSERHIVT---------------------------------WNSLIAYLIKHRRS 146
Query: 131 HAAIELFRDMRRDDVKPDNFTFTSVLSALA-LIVEEEKQCMQMHCTVVKSG---TGLFTS 186
A+E++R M ++V PD +T +SV A + L +E+E Q + H V G + +F
Sbjct: 147 KEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQ--RSHGLAVILGLEVSNVF-- 202
Query: 187 VLNALISVYVKCVSSPFVSSRSLMGAARRVFDEMPERDELSWTTMMTGYV-KNDYLDAAR 245
V +AL+ +YVK F +R A+ V D + E+D + T ++ GY K + +A +
Sbjct: 203 VGSALVDMYVK-----FGKTRE----AKLVLDRVEEKDVVLITALIVGYSQKGEDTEAVK 253
Query: 246 EFLDGMSENVGVAWNALISGYVHRELKMLMLRIQLDEFTYTSVISACANSGLFRLGKQVH 305
F ML+ ++Q +E+TY SV+ +C N GK +H
Sbjct: 254 AFQ-----------------------SMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIH 290
Query: 306 AYLLRTEAKPTPEFSLPVNNALVTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSA 365
++ K E +L +L+T+Y +C
Sbjct: 291 GLMV----KSGFESALASQTSLLTMYLRCS------------------------------ 316
Query: 366 GLIDEAKSLFEAMRERNLLSWTVMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAI 425
L+D++ +F+ + N +SWT +ISGL QNG E L F +M + KP + + A+
Sbjct: 317 -LVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFTLSSAL 375
Query: 426 TSCAGLGALENGRQLHAQLVHSGYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSV 485
C+ L E GRQ+H + G+D AG+ LI +Y +CG + A VF+T+ VD +
Sbjct: 376 RGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSDMARLVFDTLSEVDVI 435
Query: 486 SWNAMIAALGQHGNGARAIELYEQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETM 545
S N MI + Q+G G A++L+E+M+ G+ P+ +T L+VL ACN++ LV+EG F++
Sbjct: 436 SLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSF 495
Query: 546 HGPYGIPPGEDHYARFIDLLCRAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDL 605
I DHYA +DLL RAG+ EA +++ + P +W LL+ C++H +++
Sbjct: 496 RKD-KIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLWRTLLSACKVHRKVEM 553
Query: 606 GIQAAEQLFQLMPHHAGTYVLLSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDN 665
+ ++ ++ P GT +L+SN+YA+ G+W+ ++ M+D +KK P SW+E++
Sbjct: 554 AERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDMKLKKNPAMSWVEINK 613
Query: 666 KVHVFLVDDT-AHPEAQAVYKYLEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSE 724
+ H F+ D +HP ++ + + LE+L+ + + LGYV D V DME KE +L HSE
Sbjct: 614 ETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQDMEETAKERSLHQHSE 673
Query: 725 KLAVAFGLMKLPGGATVRVLKNLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKC 784
KLA+AF + + GG ++R+LKNLR+C DCH+ K +S+V+ REI+ RD KRFHHFRDG C
Sbjct: 674 KLAIAFAVWRNVGG-SIRILKNLRVCVDCHSWIKIVSRVMKREIICRDSKRFHHFRDGSC 732
Query: 785 SCGDYW 790
SCGDYW
Sbjct: 733 SCGDYW 738
>sp|Q9FHF9|PP419_ARATH Pentatricopeptide repeat-containing protein At5g46460,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H49 PE=2
SV=1
Length = 697
Score = 423 bits (1087), Expect = e-117, Method: Compositional matrix adjust.
Identities = 250/764 (32%), Positives = 390/764 (51%), Gaps = 112/764 (14%)
Query: 42 ISSGFKPRE-----HIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDN 96
++ F+ RE H+++R ID AR +F+++P P + T +I Y+ S+
Sbjct: 31 VTVEFQNREVLICNHLLSRRID---------EAREVFNQVPSPHVSLYTKMITGYTRSNR 81
Query: 97 VKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVL 156
+ A +F++ P+ RD V +N+MI+ + + A++LF +M P+ SV+
Sbjct: 82 LVDALNLFDEMPV--RDVVSWNSMISGCVECGDMNTAVKLFDEM------PER----SVV 129
Query: 157 SALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRV 216
S A++ G F S + A R+
Sbjct: 130 SWTAMV------------------NGCFRS---------------------GKVDQAERL 150
Query: 217 FDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHREL----- 271
F +MP +D +W +M+ GY++ +D A + M ++W +I G E
Sbjct: 151 FYQMPVKDTAAWNSMVHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEAL 210
Query: 272 ----KMLMLRIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNAL 327
ML I+ +T VI+ACAN+ F +G QVH ++ K + V+ +L
Sbjct: 211 DLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQVHGLII----KLGFLYEEYVSASL 266
Query: 328 VTLYWKCGKVNEARDIFNQMPERDLVSWNAILSAYVSAGLIDEAKSLFEAMRERNLLSWT 387
+T Y C ++ ++R +F+ E + E+ + WT
Sbjct: 267 ITFYANCKRIGDSRKVFD------------------------------EKVHEQ-VAVWT 295
Query: 388 VMISGLAQNGYGEEGLKLFSQMRLEGFKPCDYAFAGAITSCAGLGALENGRQLHAQLVHS 447
++SG + N E+ L +FS M P FA + SC+ LG L+ G+++H V
Sbjct: 296 ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKL 355
Query: 448 GYDSSLSAGNALITMYARCGVVEAANCVFNTMPNVDSVSWNAMIAALGQHGNGARAIELY 507
G ++ GN+L+ MY+ G V A VF + VSWN++I QHG G A ++
Sbjct: 356 GLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIF 415
Query: 508 EQMLKEGILPDRITFLTVLSACNHAGLVKEGRRYFETMH-GPYGIPPGEDHYARFIDLLC 566
QM++ PD ITF +LSAC+H G +++GR+ F M G I HY +D+L
Sbjct: 416 GQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILG 475
Query: 567 RAGKFSEAKDVIDSLPFKPSAPIWEALLAGCRIHGNIDLGIQAAEQLFQLMPHHAGTYVL 626
R GK EA+++I+ + KP+ +W ALL+ CR+H ++D G +AA +F L + YVL
Sbjct: 476 RCGKLKEAEELIERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVL 535
Query: 627 LSNMYANLGRWDDAARVRKLMRDRGVKKEPGCSWIEVDNKVHVFLVDDTAHPEAQAVYKY 686
LSN+YA+ GRW + +++R M+ G+ K+PG SW+ + K H F D P +Y+
Sbjct: 536 LSNIYASAGRWSNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEK 593
Query: 687 LEQLVLEMRKLGYVPDTKFVLHDMESDQKEYALSTHSEKLAVAFGLMKLPGGATVRVLKN 746
LE L ++++LGY PD + LHD+E +QKE L HSE+LA+AFGL+ G+ V V+KN
Sbjct: 594 LEFLREKLKELGYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKN 653
Query: 747 LRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 790
LR+C DCH K +S VVGREIV+RD RFHHF++G CSCGDYW
Sbjct: 654 LRVCEDCHTVIKLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/326 (21%), Positives = 135/326 (41%), Gaps = 68/326 (20%)
Query: 37 VHAHMISSGFKPREHIINRLIDIYCKSLKLVYARTLFDEIPQPDIVARTTLIAAYSASDN 96
VH +I GF E++ LI Y ++ +R +FDE + T
Sbjct: 247 VHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWT----------- 295
Query: 97 VKLAREMFNKTPLKMRDTVFYNAMITAYSHNSNGHAAIELFRDMRRDDVKPDNFTFTSVL 156
A+++ YS N A+ +F M R+ + P+ TF S L
Sbjct: 296 ----------------------ALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGL 333
Query: 157 SALALIVEEEKQCMQMHCTVVKSGTGLFTSVLNALISVYVKCVSSPFVSSRSLMGAARRV 216
++ + + + +MH VK G V N+L+ +Y S + A V
Sbjct: 334 NSCSALGTLDWG-KEMHGVAVKLGLETDAFVGNSLVVMY---------SDSGNVNDAVSV 383
Query: 217 FDEMPERDELSWTTMMTGYVKNDYLDAAREFLDGMSENVGVAWNALISGYVHRELKMLML 276
F ++ ++ +SW +++ G ++ G + W +I G +M+ L
Sbjct: 384 FIKIFKKSIVSWNSIIVGCAQH-----------GRGK-----WAFVIFG------QMIRL 421
Query: 277 RIQLDEFTYTSVISACANSGLFRLGKQVHAYLLRTEAKPTPEFSLPVNNALVTLYWKCGK 336
+ DE T+T ++SAC++ G G+++ Y+ + + + +V + +CGK
Sbjct: 422 NKEPDEITFTGLLSACSHCGFLEKGRKLFYYM--SSGINHIDRKIQHYTCMVDILGRCGK 479
Query: 337 VNEARDIFNQMPER-DLVSWNAILSA 361
+ EA ++ +M + + + W A+LSA
Sbjct: 480 LKEAEELIERMVVKPNEMVWLALLSA 505
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 288,596,141
Number of Sequences: 539616
Number of extensions: 12036140
Number of successful extensions: 39198
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 368
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 28207
Number of HSP's gapped (non-prelim): 3345
length of query: 790
length of database: 191,569,459
effective HSP length: 126
effective length of query: 664
effective length of database: 123,577,843
effective search space: 82055687752
effective search space used: 82055687752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 65 (29.6 bits)