BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003869
(790 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LME6|MBD8_ARATH Methyl-CpG-binding domain-containing protein 8 OS=Arabidopsis
thaliana GN=MBD8 PE=2 SV=1
Length = 524
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/161 (45%), Positives = 96/161 (59%), Gaps = 20/161 (12%)
Query: 150 KRKRGRKPKTK--VKSLE--------------ENLV--MVNKNGSVVDIVDLGSL-EDPY 190
KRKRGR PK K + +LE E LV + N+ G++VD+ L S+ EDPY
Sbjct: 238 KRKRGRPPKNKEEIMNLEKRDSAIVNISAFDKEELVVNLENREGTIVDLSALASVSEDPY 297
Query: 191 GEELRRRTEGISANEEALLGFLRDLGGQWCSRRKKRKIVDADLLGDTLPVGWKLLLGLKR 250
EELRR T G+ EE +LGFL L G+W + KK+K+V+A G LP GW+L+L +KR
Sbjct: 298 EEELRRITVGLKTKEE-ILGFLEQLNGEWVNIGKKKKVVNACDYGGYLPRGWRLMLYIKR 356
Query: 251 REGRASVYCRRYISPGGQHFVSCKEVSGYLQSYFGLNDTNQ 291
+ + CRRYISP GQ F +CKEVS YL+S NQ
Sbjct: 357 KGSNLLLACRRYISPDGQQFETCKEVSTYLRSLLESPSKNQ 397
Score = 55.8 bits (133), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 44/67 (65%), Gaps = 7/67 (10%)
Query: 3 SIDSLPFIDMTTLTQSELRALSLCSASAFDLNRL-------DDVVIPAIDRSIFNESAGS 55
S +SLP ID L+QSELRALS CS+ + + DD + P IDRS+FNESAGS
Sbjct: 22 SAESLPLIDTRLLSQSELRALSQCSSLSPSSSASLAASAGGDDDLTPKIDRSVFNESAGS 81
Query: 56 RRQTFSR 62
R+QTF R
Sbjct: 82 RKQTFLR 88
>sp|P39413|AEF1_DROME Adult enhancer factor 1 OS=Drosophila melanogaster GN=Aef1 PE=2
SV=1
Length = 308
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 39/85 (45%), Gaps = 11/85 (12%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSFH--------QRTTRRYRLGSSVGDGVIIKDGK--FEC 397
++C+ C+ TF + T HL H + +R S++ + V I G+ FEC
Sbjct: 212 YKCNVCDKTFRQSSTLTNHL-KIHTGEKPYNCNFCPKHFRQLSTLANHVKIHTGEKPFEC 270
Query: 398 QFCHKVFHERRRYNGHVGIHVRNYV 422
C K F + N H+ IHV + V
Sbjct: 271 VICKKQFRQSSTLNNHIKIHVMDKV 295
>sp|C5BET0|SYH_EDWI9 Histidine--tRNA ligase OS=Edwardsiella ictaluri (strain 93-146)
GN=hisS PE=3 SV=1
Length = 424
Score = 38.5 bits (88), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD L +E LK+ L YG SE + ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTALWQPIEAALKQVLASYGYSEIRLPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + E R+
Sbjct: 65 KEMYTFEDRN 74
>sp|A6NDX5|ZN840_HUMAN Putative zinc finger protein 840 OS=Homo sapiens GN=ZNF840 PE=5
SV=5
Length = 716
Score = 38.5 bits (88), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 31/122 (25%), Positives = 44/122 (36%), Gaps = 29/122 (23%)
Query: 348 FECHKCEMTFDEKDTYLQHL-----------------------LSFHQRTTRRYRLGSSV 384
FEC++C TF+ +QH LS HQR R+ +
Sbjct: 207 FECNQCGETFNRPSKVIQHQSMHSGLKPYKCDVCQKAFRFLSSLSIHQRFHVGNRVNLTR 266
Query: 385 GDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVR------NYVRGIEEPHGRLTLQKRT 438
+ F C FC K FH H+ IH R NY + P+ + L +RT
Sbjct: 267 HQKTHTQRKPFSCNFCGKTFHRFSEKTQHLLIHTRKKYYTCNYCKKEFNPYSKFILHQRT 326
Query: 439 ES 440
+
Sbjct: 327 HT 328
>sp|P09272|VP22_VZVD Tegument protein VP22 OS=Varicella-zoster virus (strain Dumas)
GN=ORF9 PE=3 SV=1
Length = 302
Score = 38.5 bits (88), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 578 GCPVESNVNLGCLNTVEPGEPDEV-------NNNKNIRVEACSGSS----NVEPADEKLS 626
G P +S+ +LG + TV P V + N RV + SS + E DE ++
Sbjct: 37 GPPDDSDDSLGYITTVGADSPSPVYADLYFEHKNTTPRVHQPNDSSGSEDDFEDIDEVVA 96
Query: 627 AAVEENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKVEDEAHR 672
A E L+ L++ V E +S+ +PS F AV K+ED R
Sbjct: 97 AFREARLRHELVEDAVYENPLSVEKPSRSFTKNAAVKPKLEDSPKR 142
>sp|Q4JQW6|VP22_VZVO Tegument protein VP22 OS=Varicella-zoster virus (strain Oka
vaccine) GN=ORF9 PE=1 SV=1
Length = 302
Score = 38.5 bits (88), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 49/106 (46%), Gaps = 11/106 (10%)
Query: 578 GCPVESNVNLGCLNTVEPGEPDEV-------NNNKNIRVEACSGSS----NVEPADEKLS 626
G P +S+ +LG + TV P V + N RV + SS + E DE ++
Sbjct: 37 GPPDDSDDSLGYITTVGADSPSPVYADLYFEHKNTTPRVHQPNDSSGSEDDFEDIDEVVA 96
Query: 627 AAVEENLKENLLQYGVSETSMSLLEPSHGFPTTNAVSNKVEDEAHR 672
A E L+ L++ V E +S+ +PS F AV K+ED R
Sbjct: 97 AFREARLRHELVEDAVYENPLSVEKPSRSFTKNAAVKPKLEDSPKR 142
>sp|C1D6F1|PUR9_LARHH Bifunctional purine biosynthesis protein PurH OS=Laribacter
hongkongensis (strain HLHK9) GN=purH PE=3 SV=1
Length = 526
Score = 38.1 bits (87), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 53/274 (19%), Positives = 104/274 (37%), Gaps = 59/274 (21%)
Query: 387 GVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGIEEPHGRLTLQKRTESPIRDEF 446
G + + +F+ K F Y+G + NY+ ++ G P+R F
Sbjct: 164 GALSRATRFD--LSRKAFTHTAAYDGAIS----NYLTAVQADQGL------AGEPVRTLF 211
Query: 447 PTRISKMDALIEIAQNSILETSTGGPNNEPVDDAKFDTNMD---------------ELSD 491
PTR++ +++ + ++ G N P A F ++D ELS
Sbjct: 212 PTRLN-----LQVVK---VQDMRYGEN--PHQSAAFYRDLDPAPGTLAHYRQLQGKELSY 261
Query: 492 QQIIENMVTTEKMKKIDDAGCLMDVKVEACVDTGTSIPADEQNGCK----SEASDGKDGL 547
I ++ E +K DD C++ C G ++ AD + + ++ + G+
Sbjct: 262 NNIADSDAAWEAVKTFDDPACVIVKHANPC---GVAVAADPLSAYRLAFATDTTSAFGGI 318
Query: 548 VFIAEEIDKSVIERESGA-ESCLLAPSINQNG--------------CPVESNVNLGCLNT 592
+ E+D + +E S L+AP+ + PVE+ N L
Sbjct: 319 IAFNREVDAATVEAVSAQFLEVLIAPAFTDDAKALIAAKKNVRVLEVPVEAGANRFELKR 378
Query: 593 VEPGEPDEVNNNKNIRVEACSGSSNVEPADEKLS 626
V G + + KN+ ++ + +P ++L+
Sbjct: 379 VGGGLLVQTPDIKNVTLDELKVVTKAQPTRQQLA 412
>sp|P57071|PRD15_HUMAN PR domain zinc finger protein 15 OS=Homo sapiens GN=PRDM15 PE=2 SV=4
Length = 1507
Score = 37.7 bits (86), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 31/73 (42%), Gaps = 19/73 (26%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHER 407
+ C +C++TF YL+H++ H K+ + C C++ F +
Sbjct: 992 YSCKRCQLTFGRGKEYLKHIMEVH-------------------KEKGYGCSICNRRFALK 1032
Query: 408 RRYNGHVGIHVRN 420
Y+ H+ IH N
Sbjct: 1033 ATYHAHMVIHREN 1045
>sp|B2VE90|SYH_ERWT9 Histidine--tRNA ligase OS=Erwinia tasmaniensis (strain DSM 17950 /
Et1/99) GN=hisS PE=3 SV=1
Length = 425
Score = 37.7 bits (86), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD + VE+ LK+ L YG SE M ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTAVWQRVEQILKQVLSSYGFSEIRMPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + + R+
Sbjct: 65 KEMYTFDDRN 74
>sp|P08155|KRUH_DROME Krueppel homologous protein 1 OS=Drosophila melanogaster GN=Kr-h1
PE=2 SV=2
Length = 845
Score = 37.0 bits (84), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 20/85 (23%)
Query: 336 IDNLAEVQV-RDLFECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGK 394
I LA V D ++C+ C+ TF + R R YR + +
Sbjct: 258 IKPLANVAAGADPYQCNVCQKTF-----------AVPARLIRHYRTHTG--------ERP 298
Query: 395 FECQFCHKVFHERRRYNGHVGIHVR 419
FEC+FCHK+F + H IH +
Sbjct: 299 FECEFCHKLFSVKENLQVHRRIHTK 323
>sp|A4SP01|SYH_AERS4 Histidine--tRNA ligase OS=Aeromonas salmonicida (strain A449)
GN=hisS PE=3 SV=1
Length = 425
Score = 36.2 bits (82), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 608 RVEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKV 666
+++A G ++ P + VE+ L++ + YG SE M ++E +H F V++ V
Sbjct: 4 QIQAIRGMNDCLPEQSPVWQKVEQILRQVVASYGYSEVRMPIVEQTHLFKRAIGEVTDVV 63
Query: 667 EDEAHRIEQRH 677
E E + E R+
Sbjct: 64 EKEMYTFEDRN 74
>sp|Q9HC78|ZBT20_HUMAN Zinc finger and BTB domain-containing protein 20 OS=Homo sapiens
GN=ZBTB20 PE=1 SV=3
Length = 741
Score = 36.2 bits (82), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSF-----HQRTT--RRYRLGSSVGDGVIIKDG--KFECQ 398
+EC C TF K Y++H+ HQ + R + L + ++ G ++C
Sbjct: 578 YECTLCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCS 637
Query: 399 FCHKVFHERRRYNGHVGIH 417
C+K F ++ N H+ +H
Sbjct: 638 ICNKRFTQKSSLNVHMRLH 656
>sp|Q8K0L9|ZBT20_MOUSE Zinc finger and BTB domain-containing protein 20 OS=Mus musculus
GN=Zbtb20 PE=1 SV=1
Length = 741
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSF-----HQRTT--RRYRLGSSVGDGVIIKDG--KFECQ 398
+EC C TF K Y++H+ HQ + R + L + ++ G ++C
Sbjct: 578 YECTLCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCS 637
Query: 399 FCHKVFHERRRYNGHVGIH 417
C+K F ++ N H+ +H
Sbjct: 638 ICNKRFTQKSSLNVHMRLH 656
>sp|A0KJ45|SYH_AERHH Histidine--tRNA ligase OS=Aeromonas hydrophila subsp. hydrophila
(strain ATCC 7966 / NCIB 9240) GN=hisS PE=3 SV=1
Length = 425
Score = 36.2 bits (82), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 1/71 (1%)
Query: 608 RVEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKV 666
+++A G ++ P + VE+ L++ + YG SE M ++E +H F V++ V
Sbjct: 4 QIQAIRGMNDCLPEQSPVWQKVEQILRQVVASYGYSEVRMPIVEQTHLFKRAIGEVTDVV 63
Query: 667 EDEAHRIEQRH 677
E E + E R+
Sbjct: 64 EKEMYTFEDRN 74
>sp|A1JKS3|SYH_YERE8 Histidine--tRNA ligase OS=Yersinia enterocolitica serotype O:8 /
biotype 1B (strain 8081) GN=hisS PE=3 SV=1
Length = 424
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD + +E LK+ L YG SE M ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTAIWQRIEGILKQVLAGYGYSEIRMPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + + R+
Sbjct: 65 KEMYTFDDRN 74
>sp|A7FFZ0|SYH_YERP3 Histidine--tRNA ligase OS=Yersinia pseudotuberculosis serotype O:1b
(strain IP 31758) GN=hisS PE=3 SV=1
Length = 424
Score = 35.4 bits (80), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD + +E LK+ L YG SE M ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + + R+
Sbjct: 65 KEMYTFDDRN 74
>sp|B1JS06|SYH_YERPY Histidine--tRNA ligase OS=Yersinia pseudotuberculosis serotype O:3
(strain YPIII) GN=hisS PE=3 SV=1
Length = 424
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD + +E LK+ L YG SE M ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + + R+
Sbjct: 65 KEMYTFDDRN 74
>sp|Q668A0|SYH_YERPS Histidine--tRNA ligase OS=Yersinia pseudotuberculosis serotype I
(strain IP32953) GN=hisS PE=3 SV=1
Length = 424
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD + +E LK+ L YG SE M ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + + R+
Sbjct: 65 KEMYTFDDRN 74
>sp|A4TMT6|SYH_YERPP Histidine--tRNA ligase OS=Yersinia pestis (strain Pestoides F)
GN=hisS PE=3 SV=1
Length = 424
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD + +E LK+ L YG SE M ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + + R+
Sbjct: 65 KEMYTFDDRN 74
>sp|Q1CK90|SYH_YERPN Histidine--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Nepal516) GN=hisS PE=3 SV=1
Length = 424
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD + +E LK+ L YG SE M ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + + R+
Sbjct: 65 KEMYTFDDRN 74
>sp|A9R801|SYH_YERPG Histidine--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Angola) GN=hisS PE=3 SV=1
Length = 424
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD + +E LK+ L YG SE M ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + + R+
Sbjct: 65 KEMYTFDDRN 74
>sp|Q8ZCT6|SYH_YERPE Histidine--tRNA ligase OS=Yersinia pestis GN=hisS PE=3 SV=1
Length = 424
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD + +E LK+ L YG SE M ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + + R+
Sbjct: 65 KEMYTFDDRN 74
>sp|B2K9P9|SYH_YERPB Histidine--tRNA ligase OS=Yersinia pseudotuberculosis serotype IB
(strain PB1/+) GN=hisS PE=3 SV=1
Length = 424
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD + +E LK+ L YG SE M ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + + R+
Sbjct: 65 KEMYTFDDRN 74
>sp|Q1C5I9|SYH_YERPA Histidine--tRNA ligase OS=Yersinia pestis bv. Antiqua (strain
Antiqua) GN=hisS PE=3 SV=1
Length = 424
Score = 35.4 bits (80), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Query: 609 VEACSGSSNVEPADEKLSAAVEENLKENLLQYGVSETSMSLLEPSHGFP-TTNAVSNKVE 667
++A G ++ PAD + +E LK+ L YG SE M ++E + F V++ VE
Sbjct: 5 IQAIRGMNDYLPADTAIWQRIESILKQVLSGYGYSEIRMPIVEQTPLFKRAIGEVTDVVE 64
Query: 668 DEAHRIEQRH 677
E + + R+
Sbjct: 65 KEMYTFDDRN 74
>sp|Q9C0G0|ZN407_HUMAN Zinc finger protein 407 OS=Homo sapiens GN=ZNF407 PE=1 SV=2
Length = 2248
Score = 35.0 bits (79), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 14/71 (19%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHER 407
++CH C + F K HLL H T + R KF C C + F E+
Sbjct: 1595 YKCHVCGVAFVMKKHLNTHLLGKHGVGTPKER--------------KFTCHLCDRSFTEK 1640
Query: 408 RRYNGHVGIHV 418
N H+ +H
Sbjct: 1641 WALNNHMKLHT 1651
>sp|D2HQI1|ZSCA4_AILME Zinc finger and SCAN domain-containing protein 4 OS=Ailuropoda
melanoleuca GN=ZSCAN4 PE=3 SV=1
Length = 430
Score = 35.0 bits (79), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 17/78 (21%), Positives = 30/78 (38%), Gaps = 19/78 (24%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHER 407
F C CE +F K L H + + + +EC CH+ + +
Sbjct: 365 FTCSTCEKSFSHKTNLLAH-------------------ERIHTGEKPYECSLCHRSYRQS 405
Query: 408 RRYNGHVGIHVRNYVRGI 425
Y+ H+ H ++ RG+
Sbjct: 406 STYHRHLRNHQKSAFRGV 423
>sp|Q5RAU9|ZN131_PONAB Zinc finger protein 131 OS=Pongo abelii GN=ZNF131 PE=2 SV=1
Length = 589
Score = 34.7 bits (78), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 17/85 (20%)
Query: 350 CHKCEMTFDEKDTYLQHLLSF-----------HQRTTRRYRLG---SSVGDGVIIKDGK- 394
C CE FD + +HL H+R R L ++ GV K G+
Sbjct: 296 CQYCEKQFDHFGHFKEHLRKHTGEKPFECPNCHERFARNSTLKCHLTACQTGVGAKKGRK 355
Query: 395 --FECQFCHKVFHERRRYNGHVGIH 417
+ECQ C+ VF+ ++ H+ IH
Sbjct: 356 KLYECQVCNSVFNSWDQFKDHLVIH 380
>sp|P0C149|SNF7_MAGO7 Vacuolar-sorting protein SNF7 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=SNF7 PE=3 SV=1
Length = 226
Score = 34.7 bits (78), Expect = 3.1, Method: Composition-based stats.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 9/79 (11%)
Query: 423 RGIEEPHGRLTLQKRTESPIRDEFPTRISKMDALIEIAQNSILETSTGGPNNEPVDDAKF 482
+ +E+ HG+LT++K DE ++ + +AL E N+I G NE +DDA
Sbjct: 112 KAMEDIHGKLTVEKV------DETMDKLREQNALSEEIVNAITNNQLG---NEAIDDADL 162
Query: 483 DTNMDELSDQQIIENMVTT 501
+ ++ + +Q+ E ++ T
Sbjct: 163 EDELEAMEQEQLDEKILKT 181
>sp|Q8R2V3|ZN445_MOUSE Zinc finger protein 445 OS=Mus musculus GN=Znf445 PE=2 SV=2
Length = 986
Score = 34.3 bits (77), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 30/73 (41%), Gaps = 3/73 (4%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLG---SSVGDGVIIKDGKFECQFCHKVF 404
++C +CE F +H +YR S++ ++I F CQ C K F
Sbjct: 746 YQCRECEKAFRWSSNLYRHQRKHFLHKRYKYRESKETSNLQSKILIDQKPFWCQECGKTF 805
Query: 405 HERRRYNGHVGIH 417
+R H GIH
Sbjct: 806 TRKRSLLDHKGIH 818
>sp|Q90W33|HIC2_DANRE Hypermethylated in cancer 2 protein OS=Danio rerio GN=hic2 PE=2
SV=1
Length = 560
Score = 34.3 bits (77), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSF-----------HQRTTRRYRLGSSVGDGVIIKDGKFE 396
F C+ C F ++ T +H+ S R TR+YRL + V + +E
Sbjct: 478 FPCNICGKMFTQRGTMTRHMRSHLGLKPFACEECGMRFTRQYRLTEHMR--VHSGEKPYE 535
Query: 397 CQFCHKVFHERRRYNGHVGIHV 418
CQ C F ++R H+ +H
Sbjct: 536 CQLCGGKFTQQRNLISHLRMHT 557
>sp|Q921B4|NRIF2_MOUSE Neurotrophin receptor-interacting factor 2 OS=Mus musculus GN=Nrif2
PE=1 SV=1
Length = 824
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 21/77 (27%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHER 407
FEC +C TF ++ QHL R G+ ++CQ C K F +
Sbjct: 736 FECSECGRTFSDRSAASQHL---------RTHTGAK----------PYQCQHCGKAFRQS 776
Query: 408 RRYNGHVGIHV--RNYV 422
HV IH R YV
Sbjct: 777 SHLTRHVRIHTGERPYV 793
>sp|Q9JLZ6|HIC2_MOUSE Hypermethylated in cancer 2 protein OS=Mus musculus GN=Hic2 PE=2
SV=4
Length = 619
Score = 34.3 bits (77), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSF-----------HQRTTRRYRLGSSVGDGVIIKDGKFE 396
F C+ C F ++ T +H+ S R TR+YRL + V + +E
Sbjct: 537 FPCNICGKMFTQRGTMTRHMRSHLGLKPFACDECGMRFTRQYRLTEHMR--VHSGEKPYE 594
Query: 397 CQFCHKVFHERRRYNGHVGIHV 418
CQ C F ++R H+ +H
Sbjct: 595 CQLCGGKFTQQRNLISHLRMHT 616
>sp|Q96JB3|HIC2_HUMAN Hypermethylated in cancer 2 protein OS=Homo sapiens GN=HIC2 PE=1
SV=2
Length = 615
Score = 34.3 bits (77), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 35/82 (42%), Gaps = 13/82 (15%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSF-----------HQRTTRRYRLGSSVGDGVIIKDGKFE 396
F C+ C F ++ T +H+ S R TR+YRL + V + +E
Sbjct: 533 FPCNICGKMFTQRGTMTRHMRSHLGLKPFACDECGMRFTRQYRLTEHMR--VHSGEKPYE 590
Query: 397 CQFCHKVFHERRRYNGHVGIHV 418
CQ C F ++R H+ +H
Sbjct: 591 CQLCGGKFTQQRNLISHLRMHT 612
>sp|P52739|ZN131_HUMAN Zinc finger protein 131 OS=Homo sapiens GN=ZNF131 PE=1 SV=2
Length = 623
Score = 34.3 bits (77), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 36/85 (42%), Gaps = 17/85 (20%)
Query: 350 CHKCEMTFDEKDTYLQHLLSF-----------HQRTTRRYRLG---SSVGDGVIIKDGK- 394
C CE FD + +HL H+R R L ++ GV K G+
Sbjct: 330 CQYCEKQFDHFGHFKEHLRKHTGEKPFECPNCHERFARNSTLKCHLTACQTGVGAKKGRK 389
Query: 395 --FECQFCHKVFHERRRYNGHVGIH 417
+ECQ C+ VF+ ++ H+ IH
Sbjct: 390 KLYECQVCNSVFNSWDQFKDHLVIH 414
>sp|A2BID7|PRD10_DANRE PR domain zinc finger protein 10 OS=Danio rerio GN=prdm10 PE=3 SV=2
Length = 1121
Score = 33.9 bits (76), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 38/84 (45%), Gaps = 12/84 (14%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSFHQRTTRR---------YRLGSSVGDGVIIKDGK--FE 396
F+C +C F +K+ QH+ FH R R + +S+ D +++ + +
Sbjct: 500 FKCPQCGKAFRDKEKLEQHM-RFHGRDGCRHVCHQCGKGFLSSTSLEDHLVLHSDQRNYS 558
Query: 397 CQFCHKVFHERRRYNGHVGIHVRN 420
C FC + + HVGIH+ N
Sbjct: 559 CLFCAESYDRLELLKVHVGIHMVN 582
>sp|Q9Y4E5|ZN451_HUMAN Zinc finger protein 451 OS=Homo sapiens GN=ZNF451 PE=1 SV=2
Length = 1061
Score = 33.9 bits (76), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 42/112 (37%), Gaps = 23/112 (20%)
Query: 328 DKEVTLLGIDNLAEVQVRDLFECHKCEMTFDEKDTYLQHLLS---FHQRTTRRYRLGSSV 384
DKE T G +N Q+ F C C + F K+ +H+ FHQ ++LG +
Sbjct: 233 DKEATDDGHNNNLLPQIIQCFACPNCFLLFSRKEECSKHMSGKNHFHQ----SFKLGDNK 288
Query: 385 GDG--------------VIIKDGKFE--CQFCHKVFHERRRYNGHVGIHVRN 420
G + KD F+ C CHK H +H RN
Sbjct: 289 GIAHPISFPSFAKKLLISLCKDVPFQVKCVACHKTLRSHMELTAHFRVHCRN 340
>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis
thaliana GN=RBE PE=2 SV=2
Length = 226
Score = 33.9 bits (76), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/89 (20%), Positives = 34/89 (38%), Gaps = 8/89 (8%)
Query: 385 GDGVIIKDGKFECQFCHKVFHERRRYNGHVGIHVRNYVRGIEEPHGRLTLQKRTESPIRD 444
G G + + C FC + F + GH+ +H R+ RL Q + S
Sbjct: 45 GGGCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRD--------RARLKQQSLSPSSTDQ 96
Query: 445 EFPTRISKMDALIEIAQNSILETSTGGPN 473
P + ++++ +++ T PN
Sbjct: 97 ATPPECDRQQQVLDVGSKVLVQEETRKPN 125
>sp|B0X0K1|KEN2_CULQU Transcription factor Ken 2 OS=Culex quinquefasciatus GN=ken2 PE=3
SV=1
Length = 670
Score = 33.9 bits (76), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 11/75 (14%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHER 407
F C C F +K L+HL S H+ G G++ C FC VF
Sbjct: 600 FACRLCVAMFKQKAHLLKHLCSVHRNIINAPEAG-----------GRYTCCFCSLVFETL 648
Query: 408 RRYNGHVGIHVRNYV 422
+ H+ H N +
Sbjct: 649 QELVRHLSGHHNNLL 663
>sp|B0X9H6|KEN1_CULQU Transcription factor Ken 1 OS=Culex quinquefasciatus GN=ken1 PE=3
SV=1
Length = 653
Score = 33.5 bits (75), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 28/75 (37%), Gaps = 11/75 (14%)
Query: 348 FECHKCEMTFDEKDTYLQHLLSFHQRTTRRYRLGSSVGDGVIIKDGKFECQFCHKVFHER 407
F C C F +K L+HL S H+ G G++ C FC VF
Sbjct: 583 FACRLCVAMFKQKAHLLKHLCSVHRNIINAPEAG-----------GRYTCCFCSLVFETL 631
Query: 408 RRYNGHVGIHVRNYV 422
+ H+ H N +
Sbjct: 632 QELVRHLSGHHNNLL 646
>sp|O89292|ENV_HV193 Envelope glycoprotein gp160 OS=Human immunodeficiency virus type 1
group M subtype F1 (isolate 93BR020) GN=env PE=3 SV=1
Length = 846
Score = 33.5 bits (75), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 237 TLPVGWKLLLGLKRREGRASVYCRRYISPGGQHFVSCKEVSGYLQSY-FGLNDTNQSINP 295
TLP K ++ + + GRA Y +P + ++G L + GLN TN++ P
Sbjct: 406 TLPCRIKQIVNMWQEVGRAM-----YANPIAGNITCNSNITGLLLTRDGGLNSTNETFRP 460
Query: 296 GGDEMQQDYR 305
GG M+ ++R
Sbjct: 461 GGGNMKDNWR 470
>sp|Q9GZU2|PEG3_HUMAN Paternally-expressed gene 3 protein OS=Homo sapiens GN=PEG3 PE=1 SV=1
Length = 1588
Score = 33.1 bits (74), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 40/92 (43%), Gaps = 17/92 (18%)
Query: 341 EVQVRD-LFECHKCEMTFDEKDTYLQHLLS------------FHQRTTRRYRLGSSVGDG 387
E+QV + ++CH+C TF + +HL + F + + R +S G
Sbjct: 1497 EIQVEEPYYDCHECTETFTSSTAFSEHLKTHASMIIFEPANAFGECSGYIERASTSTGGA 1556
Query: 388 VIIKDGKFECQFCHKVFHER----RRYNGHVG 415
+ F+C C ++F++R R N H G
Sbjct: 1557 NQADEKYFKCDVCGQLFNDRLSLARHQNTHTG 1588
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.385
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 307,412,841
Number of Sequences: 539616
Number of extensions: 13930672
Number of successful extensions: 37735
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 140
Number of HSP's that attempted gapping in prelim test: 37103
Number of HSP's gapped (non-prelim): 635
length of query: 790
length of database: 191,569,459
effective HSP length: 126
effective length of query: 664
effective length of database: 123,577,843
effective search space: 82055687752
effective search space used: 82055687752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 65 (29.6 bits)