BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 003872
(790 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8VZE4|PP299_ARATH Pentatricopeptide repeat-containing protein At4g01570
OS=Arabidopsis thaliana GN=At4g01570 PE=2 SV=1
Length = 805
Score = 1054 bits (2725), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 521/803 (64%), Positives = 634/803 (78%), Gaps = 35/803 (4%)
Query: 1 MRHGRKT--------LSPPVNSASLQLGSILLLAFVTKTLKESGTRNLDPRSIPISEPLV 52
MRHGR + LSP NS QL ++LL+A ++KTL +SGTR+LD SIPISEP+V
Sbjct: 1 MRHGRGSAVSAAISGLSPAKNSPFPQLCNVLLVASLSKTLSQSGTRSLDANSIPISEPVV 60
Query: 53 LQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQE 112
LQ+L +NS+D SKKLDFFRWC SLRP YKH+A YS IFRTVCR G L EVP LL SM+E
Sbjct: 61 LQILRRNSIDPSKKLDFFRWCYSLRPGYKHSATAYSQIFRTVCRTGLLGEVPDLLGSMKE 120
Query: 113 DDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGL 172
D V +D K+LL+ I+SGK + A+ +LDYMEELG L+P+VYDSVL++LV+K +L L
Sbjct: 121 DGVNLDQTMAKILLDSLIRSGKFESALGVLDYMEELGDCLNPSVYDSVLIALVKKHELRL 180
Query: 173 AMSILFKLLEACNDNTADNS----VVESLPGCVACNELLVALRKSDRRSEFKQVFERLKE 228
A+SILFKLLEA ++++ D++ +V LPG VA NELLV LR++D RSEFK+VFE+LK
Sbjct: 181 ALSILFKLLEASDNHSDDDTGRVIIVSYLPGTVAVNELLVGLRRADMRSEFKRVFEKLKG 240
Query: 229 QKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLV------PDLHTYNSLIQVLC 282
K F+FD + YNICIH FGCWGDL +L LFKEMKE+ V PD+ TYNSLI VLC
Sbjct: 241 MKRFKFDTWSYNICIHGFGCWGDLDAALSLFKEMKERSSVYGSSFGPDICTYNSLIHVLC 300
Query: 283 VVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTV 342
+ GK KDALIVW+ELK SGHEP+ T+RI+IQGCCKSYRMDDAM+I+ EMQYNG +PDT+
Sbjct: 301 LFGKAKDALIVWDELKVSGHEPDNSTYRILIQGCCKSYRMDDAMRIYGEMQYNGFVPDTI 360
Query: 343 VYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDL 402
VYN LL+G K+RKV EACQLFEKMVQ+GVR SCWT+NILIDGLFRNGRAEA +TLFCDL
Sbjct: 361 VYNCLLDGTLKARKVTEACQLFEKMVQEGVRASCWTYNILIDGLFRNGRAEAGFTLFCDL 420
Query: 403 KKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRW 462
KKKG+FVD ITFSIV LQLCREG++E A++LVEEME RGF VDLVTISSLLIGFHK GRW
Sbjct: 421 KKKGQFVDAITFSIVGLQLCREGKLEGAVKLVEEMETRGFSVDLVTISSLLIGFHKQGRW 480
Query: 463 DFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGST 522
D+ E+LMKHIR+GNLV +VL+W A VEA++K +SK KDYTPMFP KG +IMS++GS
Sbjct: 481 DWKEKLMKHIREGNLVPNVLRWNAGVEASLKRPQSKDKDYTPMFPSKGSFLDIMSMVGSE 540
Query: 523 NLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQ 582
+ +G + +E S + + D WSSSPYMD+LA Q LF LARG RV+
Sbjct: 541 D----------DGASAEEVSPMED-DPWSSSPYMDQLAHQRN---QPKPLFGLARGQRVE 586
Query: 583 GKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPV-NYTYNSMMSSFVKKGY 641
K +FD+DM+NTFLSI+L+KG L+LACKLFEIF MGV + +YTYNSMMSSFVKKGY
Sbjct: 587 AKP-DSFDVDMMNTFLSIYLSKGDLSLACKLFEIFNGMGVTDLTSYTYNSMMSSFVKKGY 645
Query: 642 FNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYN 701
F A GVL++M E FC DIATYNV+IQGLGKMGRADLAS +LD+L KQ GGYLD+VMYN
Sbjct: 646 FQTARGVLDQMFENFCAADIATYNVIIQGLGKMGRADLASAVLDRLTKQ-GGYLDIVMYN 704
Query: 702 TLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDS 761
TLIN LGKA R DEA LF+ M+++GINPDVV++NT+IEVN KAG+LKEA+ +LK MLD+
Sbjct: 705 TLINALGKATRLDEATQLFDHMKSNGINPDVVSYNTMIEVNSKAGKLKEAYKYLKAMLDA 764
Query: 762 GCTPNHVTDTTLDFLGREIDRLK 784
GC PNHVTDT LD+LG+E+++ +
Sbjct: 765 GCLPNHVTDTILDYLGKEMEKAR 787
>sp|Q9M907|PP217_ARATH Pentatricopeptide repeat-containing protein At3g06920
OS=Arabidopsis thaliana GN=At3g06920 PE=2 SV=1
Length = 871
Score = 207 bits (526), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 170/716 (23%), Positives = 326/716 (45%), Gaps = 28/716 (3%)
Query: 62 DSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSET 121
D ++ +++FRW R H +Y+ + + R + + +L M T
Sbjct: 77 DVNRAIEYFRWYER-RTELPHCPESYNSLLLVMARCRNFDALDQILGEMSVAGFGPSVNT 135
Query: 122 FKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL 181
++ C+K+ K+ +++ M + + + Y +++ + + +++ ++
Sbjct: 136 CIEMVLGCVKANKLREGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVNHSDMMLTLFQQMQ 195
Query: 182 EACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNI 241
E + P L+ K R + + +K + DI YN+
Sbjct: 196 ELGYE-----------PTVHLFTTLIRGFAKEGRVDSALSLLDEMKSS-SLDADIVLYNV 243
Query: 242 CIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSG 301
CI +FG G + + + F E++ GL PD TY S+I VLC ++ +A+ ++E L+ +
Sbjct: 244 CIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKNR 303
Query: 302 HEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEAC 361
P + + +I G + + D+A + + G IP + YN +L + K KV EA
Sbjct: 304 RVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEAL 363
Query: 362 QLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQL 421
++FE+M +D + T+NILID L R G+ + A+ L ++K G F + T +I+V +L
Sbjct: 364 KVFEEMKKDAA-PNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRL 422
Query: 422 CREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDV 481
C+ +++EA + EEM+ + D +T SL+ G K GR D ++ + + D + +
Sbjct: 423 CKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNS 482
Query: 482 LKWKADVEATMKS--RKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKD 539
+ + + ++ ++ K Y M + S + L+ N D +GE +
Sbjct: 483 IVYTSLIKNFFNHGRKEDGHKIYKDMI--NQNCSPDLQLL---NTYMDCMFKAGEPEKGR 537
Query: 540 EGSQLTNSDEW--SSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTF 597
+ + + + Y + +K+ +++ + L ++ QG D N
Sbjct: 538 AMFEEIKARRFVPDARSYSILIHGLIKAG-FANETYELFYSMKEQG---CVLDTRAYNIV 593
Query: 598 LSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFC 657
+ F GK+N A +L E G P TY S++ K ++A+ + E K
Sbjct: 594 IDGFCKCGKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRI 653
Query: 658 PTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEAN 717
++ Y+ +I G GK+GR D A IL++LM Q G ++ +N+L++ L KA +EA
Sbjct: 654 ELNVVIYSSLIDGFGKVGRIDEAYLILEELM-QKGLTPNLYTWNSLLDALVKAEEINEAL 712
Query: 718 MLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ F+ M+ P+ VT+ LI K + +A F + M G P+ ++ TT+
Sbjct: 713 VCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTM 768
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 165/654 (25%), Positives = 305/654 (46%), Gaps = 41/654 (6%)
Query: 135 IDFAIEILDYMEELGTSLS--PNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNS 192
++ AIE + E T L P Y+S+L+ + R + A+ + + + N+
Sbjct: 78 VNRAIEYFRWYERR-TELPHCPESYNSLLLVMARCRNFD-ALDQILGEMSVAGFGPSVNT 135
Query: 193 VVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEF--DIYGYNICIHAFGCWG 250
+E + GCV N+L ++ ++ ++ ++F+F Y I AF
Sbjct: 136 CIEMVLGCVKANKL-------------REGYDVVQMMRKFKFRPAFSAYTTLIGAFSAVN 182
Query: 251 DLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHR 310
L LF++M+E G P +H + +LI+ G+V AL + +E+K S + + +
Sbjct: 183 HSDMMLTLFQQMQELGYEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYN 242
Query: 311 IIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQD 370
+ I K ++D A K F E++ NGL PD V Y S++ + K+ ++ EA ++FE + ++
Sbjct: 243 VCIDSFGKVGKVDMAWKFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVEMFEHLEKN 302
Query: 371 GVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEA 430
+ +N +I G G+ + AY+L + KG I ++ ++ L + G+++EA
Sbjct: 303 RRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIPSVIAYNCILTCLRKMGKVDEA 362
Query: 431 LRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEA 490
L++ EEM+ + +L T + L+ + G+ D L ++ L +V V+
Sbjct: 363 LKVFEEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDR 421
Query: 491 TMKSRK-------SKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQ 543
KS+K + DY P + ++ +G D DA +
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVG-RVD--------DAYKVYEK 472
Query: 544 LTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLA 603
+ +SD ++S L + + + + Q + D+ ++NT++
Sbjct: 473 MLDSDCRTNSIVYTSLIKNFFNHGRKEDGHKIYKDMINQN---CSPDLQLLNTYMDCMFK 529
Query: 604 KGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIAT 663
G+ +FE P +Y+ ++ +K G+ N+ + + M E+ C D
Sbjct: 530 AGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRA 589
Query: 664 YNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQM 723
YN+VI G K G+ + A +L++ MK G VV Y ++I+ L K R DEA MLFE+
Sbjct: 590 YNIVIDGFCKCGKVNKAYQLLEE-MKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEA 648
Query: 724 RTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT-DTTLDFL 776
++ I +VV +++LI+ GK GR+ EA+ L+ ++ G TPN T ++ LD L
Sbjct: 649 KSKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDAL 702
Score = 195 bits (495), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 164/673 (24%), Positives = 301/673 (44%), Gaps = 56/673 (8%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y+ T ++ + R + G ++ SLL+ M+ + D + + ++ K GK+D A
Sbjct: 199 YEPTVHLFTTLIRGFAKEGRVDSALSLLDEMKSSSLDADIVLYNVCIDSFGKVGKVDMAW 258
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPG 199
+ +E G Y S++ L + +L A+ +F+ LE +P
Sbjct: 259 KFFHEIEANGLKPDEVTYTSMIGVLCKANRLDEAVE-MFEHLEK----------NRRVPC 307
Query: 200 CVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLF 259
A N +++ + + E + ER + + + YN + G + +L++F
Sbjct: 308 TYAYNTMIMGYGSAGKFDEAYSLLERQRAKGSIP-SVIAYNCILTCLRKMGKVDEALKVF 366
Query: 260 KEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS 319
+EMK K P+L TYN LI +LC GK+ A + + ++ +G PN T I++ CKS
Sbjct: 367 EEMK-KDAAPNLSTYNILIDMLCRAGKLDTAFELRDSMQKAGLFPNVRTVNIMVDRLCKS 425
Query: 320 YRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTH 379
++D+A +F EM Y PD + + SL++G+ K +V +A +++EKM+ RT+ +
Sbjct: 426 QKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTNSIVY 485
Query: 380 NILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEG 439
LI F +GR E + ++ D+ + D + + + + G+ E+ + EE++
Sbjct: 486 TSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFEEIKA 545
Query: 440 RGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKR 499
R FV D + S L+ G K G + T L +++ VLD + ++ K K +
Sbjct: 546 RRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNK 605
Query: 500 KDYTPMFPYKGDLSEIMSLIGSTNLE-TDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDK 558
+++ + + E T GS +D
Sbjct: 606 A------------YQLLEEMKTKGFEPTVVTYGS----------------------VIDG 631
Query: 559 LADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFT 618
LA + D + LF A+ R++ ++ + ++ + F G+++ A + E
Sbjct: 632 LAKIDRLD-EAYMLFEEAKSKRIE------LNVVIYSSLIDGFGKVGRIDEAYLILEELM 684
Query: 619 DMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRAD 678
G+ P YT+NS++ + VK N+A M E C + TY ++I GL K+ + +
Sbjct: 685 QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFN 744
Query: 679 LASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTL 738
A ++ KQG + Y T+I+ L KAG EA LF++ + +G PD +N +
Sbjct: 745 KAFVFWQEMQKQGMK-PSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAM 803
Query: 739 IEVNGKAGRLKEA 751
IE R +A
Sbjct: 804 IEGLSNGNRAMDA 816
Score = 135 bits (340), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/335 (26%), Positives = 168/335 (50%), Gaps = 12/335 (3%)
Query: 96 RAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPN 155
+AG E+ ++ ++ V D+ ++ +L+ IK+G + E+ M+E G L
Sbjct: 529 KAGEPEKGRAMFEEIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTR 588
Query: 156 VYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDR 215
Y+ V+ + ++ A ++LLE + P V ++ L K DR
Sbjct: 589 AYNIVIDGFCKCGKVNKA----YQLLEEMKTKGFE-------PTVVTYGSVIDGLAKIDR 637
Query: 216 RSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYN 275
E +FE K K E ++ Y+ I FG G + + + +E+ +KGL P+L+T+N
Sbjct: 638 LDEAYMLFEEAK-SKRIELNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWN 696
Query: 276 SLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYN 335
SL+ L ++ +AL+ ++ +K PN+ T+ I+I G CK + + A + EMQ
Sbjct: 697 SLLDALVKAEEINEALVCFQSMKELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQ 756
Query: 336 GLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAA 395
G+ P T+ Y ++++G+ K+ + EA LF++ +G +N +I+GL RA A
Sbjct: 757 GMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDA 816
Query: 396 YTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEA 430
++LF + +++G + T +++ L + +E+A
Sbjct: 817 FSLFEETRRRGLPIHNKTCVVLLDTLHKNDCLEQA 851
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 91/324 (28%), Positives = 160/324 (49%), Gaps = 12/324 (3%)
Query: 84 ACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILD 143
A +YS + + +AGF E L SM+E V+D+ + ++++ K GK++ A ++L+
Sbjct: 552 ARSYSILIHGLIKAGFANETYELFYSMKEQGCVLDTRAYNIVIDGFCKCGKVNKAYQLLE 611
Query: 144 YMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
M+ G + Y SV+ L + +L A +LF+ EA + N V+ S
Sbjct: 612 EMKTKGFEPTVVTYGSVIDGLAKIDRLDEAY-MLFE--EAKSKRIELNVVIYS------- 661
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
L+ K R E + E L QK ++Y +N + A +++ +L F+ MK
Sbjct: 662 -SLIDGFGKVGRIDEAYLILEELM-QKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMK 719
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
E P+ TY LI LC V K A + W+E++ G +P+ ++ +I G K+ +
Sbjct: 720 ELKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIA 779
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
+A +F + NG +PD+ YN+++ G+ + M+A LFE+ + G+ T +L+
Sbjct: 780 EAGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLL 839
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGK 407
D L +N E A + L++ GK
Sbjct: 840 DTLHKNDCLEQAAIVGAVLRETGK 863
Score = 103 bits (256), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 103/424 (24%), Positives = 173/424 (40%), Gaps = 60/424 (14%)
Query: 94 VCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLS 153
+C++ L+E ++ M D TF L++ K G++D A ++ + M + +
Sbjct: 422 LCKSQKLDEACAMFEEMDYKVCTPDEITFCSLIDGLGKVGRVDDAYKVYEKMLDSDCRTN 481
Query: 154 PNVYDSVLVSLV---RKKQ-------------------LGLAMSILFKLLEACNDNTADN 191
VY S++ + RK+ L M +FK E
Sbjct: 482 SIVYTSLIKNFFNHGRKEDGHKIYKDMINQNCSPDLQLLNTYMDCMFKAGEPEKGRAMFE 541
Query: 192 SVVES--LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCW 249
+ +P + + L+ L K+ +E ++F +KEQ D YNI I F
Sbjct: 542 EIKARRFVPDARSYSILIHGLIKAGFANETYELFYSMKEQGCV-LDTRAYNIVIDGFCKC 600
Query: 250 GDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTH 309
G ++ + +L +EMK KG P + TY S+I L + ++ +A +++EE K E N +
Sbjct: 601 GKVNKAYQLLEEMKTKGFEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIY 660
Query: 310 RIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLL--------------------- 348
+I G K R+D+A I E+ GL P+ +NSLL
Sbjct: 661 SSLIDGFGKVGRIDEAYLILEELMQKGLTPNLYTWNSLLDALVKAEEINEALVCFQSMKE 720
Query: 349 --------------NGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEA 394
NG+ K RK +A +++M + G++ S ++ +I GL + G
Sbjct: 721 LKCTPNQVTYGILINGLCKVRKFNKAFVFWQEMQKQGMKPSTISYTTMISGLAKAGNIAE 780
Query: 395 AYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLI 454
A LF K G D ++ ++ L + +A L EE RG + T LL
Sbjct: 781 AGALFDRFKANGGVPDSACYNAMIEGLSNGNRAMDAFSLFEETRRRGLPIHNKTCVVLLD 840
Query: 455 GFHK 458
HK
Sbjct: 841 TLHK 844
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 98/191 (51%), Gaps = 4/191 (2%)
Query: 596 TFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEK 655
+ + + +L+ A ++FE P Y YN+M+ + G F++A+ +L K
Sbjct: 278 SMIGVLCKANRLDEAVEMFEHLEKNRRVPCTYAYNTMIMGYGSAGKFDEAYSLLERQRAK 337
Query: 656 FCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDE 715
+ YN ++ L KMG+ D A + +++ K L YN LI++L +AG+ D
Sbjct: 338 GSIPSVIAYNCILTCLRKMGKVDEALKVFEEMKKDAAPNLST--YNILIDMLCRAGKLDT 395
Query: 716 ANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL-D 774
A L + M+ +G+ P+V T N +++ K+ +L EA + M CTP+ +T +L D
Sbjct: 396 AFELRDSMQKAGLFPNVRTVNIMVDRLCKSQKLDEACAMFEEMDYKVCTPDEITFCSLID 455
Query: 775 FLGREIDRLKD 785
LG+ + R+ D
Sbjct: 456 GLGK-VGRVDD 465
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/260 (21%), Positives = 108/260 (41%), Gaps = 51/260 (19%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
++ T TY + + + L+E L + + ++ + L++ K G+ID A
Sbjct: 618 FEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKRIELNVVIYSSLIDGFGKVGRIDEAY 677
Query: 140 EILDYMEELGTSLSPNVY--DSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESL 197
IL+ + + G L+PN+Y +S+L +LV+ +++
Sbjct: 678 LILEELMQKG--LTPNLYTWNSLLDALVKAEEI--------------------------- 708
Query: 198 PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLR 257
NE LV F+ +KE K + Y I I+ + +
Sbjct: 709 ------NEALVC-------------FQSMKELKCTPNQV-TYGILINGLCKVRKFNKAFV 748
Query: 258 LFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCC 317
++EM+++G+ P +Y ++I L G + +A +++ K +G P+ + +I+G
Sbjct: 749 FWQEMQKQGMKPSTISYTTMISGLAKAGNIAEAGALFDRFKANGGVPDSACYNAMIEGLS 808
Query: 318 KSYRMDDAMKIFSEMQYNGL 337
R DA +F E + GL
Sbjct: 809 NGNRAMDAFSLFEETRRRGL 828
>sp|Q9SZ52|PP344_ARATH Pentatricopeptide repeat-containing protein At4g31850, chloroplastic
OS=Arabidopsis thaliana GN=PGR3 PE=1 SV=1
Length = 1112
Score = 196 bits (498), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 193/759 (25%), Positives = 338/759 (44%), Gaps = 75/759 (9%)
Query: 61 LDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSE 120
LDS K+ W + + T++ + +C+AG E L+ M++ ++ +
Sbjct: 344 LDSVKQF----WSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLH 399
Query: 121 TFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL 180
T+ L+ ++ ++D A+E+ ME LG + P Y + +V + + G ++S L
Sbjct: 400 TYNTLICGLLRVHRLDDALELFGNMESLG--VKPTAY-TYIVFIDYYGKSGDSVSALETF 456
Query: 181 LEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYN 240
+ A P VACN L +L K+ R E KQ+F LK+ D YN
Sbjct: 457 EKMKTKGIA--------PNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVP-DSVTYN 507
Query: 241 ICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGS 300
+ + + G++ +++L EM E G PD+ NSLI L +V +A ++ +K
Sbjct: 508 MMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEM 567
Query: 301 GHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEA 360
+P T+ ++ G K+ ++ +A+++F M G P+T+ +N+L + + K+ +V A
Sbjct: 568 KLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLA 627
Query: 361 CQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQ 420
++ KM+ G +T+N +I GL +NG+ + A F +KK + D +T ++
Sbjct: 628 LKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKL-VYPDFVTLCTLLPG 686
Query: 421 LCREGQIEEALRLV-------EEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKH-- 471
+ + IE+A +++ + F DL I S+L F+ERL+ +
Sbjct: 687 VVKASLIEDAYKIITNFLYNCADQPANLFWEDL--IGSILAEAGIDNAVSFSERLVANGI 744
Query: 472 IRDGNLVL-DVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANL 530
RDG+ +L ++++ +R K +T + L LIG LE D
Sbjct: 745 CRDGDSILVPIIRYSCKHNNVSGARTLFEK-FTKDLGVQPKLPTYNLLIGGL-LEADM-- 800
Query: 531 GSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFD 590
A+D Q+ ++ + L D +LF L + + T
Sbjct: 801 ---IEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTIT 857
Query: 591 IDMVNTFLSIFLAKGKLNLACKLF-EIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVL 649
++V +S + G ++ A L+ ++ +D P TY ++ K G +A +
Sbjct: 858 HNIV---ISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLF 914
Query: 650 NEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQG------------------ 691
M + C + A YN++I G GK G AD A + +++K+G
Sbjct: 915 EGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMV 974
Query: 692 ----------------GGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTS-GINPDVVT 734
G DVV YN +IN LGK+ R +EA +LF +M+TS GI PD+ T
Sbjct: 975 GRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYT 1034
Query: 735 FNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+N+LI G AG ++EA + +G PN T L
Sbjct: 1035 YNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNAL 1073
Score = 186 bits (471), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 185/736 (25%), Positives = 323/736 (43%), Gaps = 60/736 (8%)
Query: 76 LRP-IYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGK 134
L+P +Y T C R + RAG + E +L M ++ D T+ +L++ + K
Sbjct: 254 LKPNVYTFTIC-----IRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARK 308
Query: 135 IDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLG------------------LAMSI 176
+D A E+ + M+ Y ++L + L + +I
Sbjct: 309 LDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTI 368
Query: 177 LF-KLLEACNDNTADNSV-----VESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQK 230
L L +A N A +++ LP N L+ L + R + ++F + E
Sbjct: 369 LVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNM-ESL 427
Query: 231 EFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDA 290
+ Y Y + I +G GD ++L F++MK KG+ P++ N+ + L G+ ++A
Sbjct: 428 GVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREA 487
Query: 291 LIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNG 350
++ LK G P+ T+ ++++ K +D+A+K+ SEM NG PD +V NSL+N
Sbjct: 488 KQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINT 547
Query: 351 MFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVD 410
++K+ +V EA ++F +M + ++ + T+N L+ GL +NG+ + A LF + +KG +
Sbjct: 548 LYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPN 607
Query: 411 GITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWD----FTE 466
ITF+ + LC+ ++ AL+++ +M G V D+ T ++++ G K G+ F
Sbjct: 608 TITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFH 667
Query: 467 RLMKHIRDGNLVLDVLKWKADVEATMKSRKSKR--------KDYTPMFPYKGDLSEIMSL 518
++ K + + L L V+A++ K D ++ + I++
Sbjct: 668 QMKKLVYPDFVTLCTL-LPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAE 726
Query: 519 IGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFS-LAR 577
G N + + G +D S L +S + + + LF +
Sbjct: 727 AGIDNAVSFSERLVANGICRDGDSILVPIIRYSC---------KHNNVSGARTLFEKFTK 777
Query: 578 GLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFV 637
L VQ K + N + L + +A +F G P TYN ++ ++
Sbjct: 778 DLGVQPK------LPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYG 831
Query: 638 KKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDV 697
K G ++ + + EM C + T+N+VI GL K G D A + LM
Sbjct: 832 KSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTA 891
Query: 698 VMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKM 757
Y LI+ L K+GR EA LFE M G P+ +N LI GKAG A K
Sbjct: 892 CTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKR 951
Query: 758 MLDSGCTPNHVTDTTL 773
M+ G P+ T + L
Sbjct: 952 MVKEGVRPDLKTYSVL 967
Score = 163 bits (413), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 172/736 (23%), Positives = 317/736 (43%), Gaps = 52/736 (7%)
Query: 71 RWCSSLRPIYKH--------TACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETF 122
R+C+ +Y+ + TYS + + + ++ V LL M+ + + TF
Sbjct: 202 RFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTF 261
Query: 123 KLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFK--- 179
+ + ++GKI+ A EIL M++ G Y ++ +L ++L A + K
Sbjct: 262 TICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKT 321
Query: 180 ------------LLEACNDNTADNSVVE---------SLPGCVACNELLVALRKSDRRSE 218
LL+ +DN +SV + +P V L+ AL K+ E
Sbjct: 322 GRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGE 381
Query: 219 FKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLI 278
+ +++Q +++ YN I L +L LF M+ G+ P +TY I
Sbjct: 382 AFDTLDVMRDQGILP-NLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFI 440
Query: 279 QVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLI 338
G AL +E++K G PN + K+ R +A +IF ++ GL+
Sbjct: 441 DYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLV 500
Query: 339 PDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTL 398
PD+V YN ++ K ++ EA +L +M+++G N LI+ L++ R + A+ +
Sbjct: 501 PDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKM 560
Query: 399 FCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHK 458
F +K+ +T++ ++ L + G+I+EA+ L E M +G + +T ++L K
Sbjct: 561 FMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCK 620
Query: 459 YGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSK------RKDYTPMFPYKGDL 512
+++ + D V DV + + +K+ + K + ++P L
Sbjct: 621 NDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYPDFVTL 680
Query: 513 SEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQL 572
++ + +L DA K + L N + ++ + + L + ++
Sbjct: 681 CTLLPGVVKASLIEDA--------YKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNA 732
Query: 573 FSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFT-DMGVHPVNYTYNS 631
S + R+ G+ ++ + ++ A LFE FT D+GV P TYN
Sbjct: 733 VSFSE--RLVANGICRDGDSILVPIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNL 790
Query: 632 MMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQG 691
++ ++ A V ++ C D+ATYN ++ GK G+ D L K M
Sbjct: 791 LIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFE-LYKEMSTH 849
Query: 692 GGYLDVVMYNTLINVLGKAGRFDEA-NMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKE 750
+ + +N +I+ L KAG D+A ++ ++ M +P T+ LI+ K+GRL E
Sbjct: 850 ECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYE 909
Query: 751 AHYFLKMMLDSGCTPN 766
A + MLD GC PN
Sbjct: 910 AKQLFEGMLDYGCRPN 925
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 145/573 (25%), Positives = 249/573 (43%), Gaps = 42/573 (7%)
Query: 203 CNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEM 262
CN +L ALR + E VF+ L +++ + D Y + G L + ++M
Sbjct: 121 CNYMLEALRVDGKLEEMAYVFD-LMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKM 179
Query: 263 KEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRM 322
+E G V + ++YN LI +L +A+ V+ + G P+ T+ ++ G K +
Sbjct: 180 REFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDI 239
Query: 323 DDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNIL 382
D M + EM+ GL P+ + + + ++ K+ EA ++ ++M +G T+ +L
Sbjct: 240 DSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVL 299
Query: 383 IDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGF 442
ID L + + A +F +K D +T+ ++ + ++ + EME G
Sbjct: 300 IDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGH 359
Query: 443 VVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDY 502
V D+VT + L+ K G + + +RD ++ ++ + + ++ +
Sbjct: 360 VPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHR------ 413
Query: 503 TPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQ 562
L + + L G N+E+ G + T Y K D
Sbjct: 414 ---------LDDALELFG--NMES-------------LGVKPTAYTYIVFIDYYGKSGDS 449
Query: 563 VKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGV 622
V + L +++ KG+ +I N L G+ A ++F D+G+
Sbjct: 450 VSA---------LETFEKMKTKGIAP-NIVACNASLYSLAKAGRDREAKQIFYGLKDIGL 499
Query: 623 HPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLAST 682
P + TYN MM + K G ++A +L+EM E C D+ N +I L K R D A
Sbjct: 500 VPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWK 559
Query: 683 ILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVN 742
+ + MK+ VV YNTL+ LGK G+ EA LFE M G P+ +TFNTL +
Sbjct: 560 MFMR-MKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCL 618
Query: 743 GKAGRLKEAHYFLKMMLDSGCTPNHVTDTTLDF 775
K + A L M+D GC P+ T T+ F
Sbjct: 619 CKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 151/667 (22%), Positives = 281/667 (42%), Gaps = 52/667 (7%)
Query: 82 HTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEI 141
HT T +++ + G LEE+ + + MQ+ + D+ T+ + + G + A
Sbjct: 116 HTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTNTYLTIFKSLSVKGGLKQAPYA 175
Query: 142 LDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESL-PGC 200
L M E G L+ Y+ ++ L++ + AM + ++ ++E P
Sbjct: 176 LRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM------------ILEGFRPSL 223
Query: 201 VACNELLVALRKSDRRSEFKQVFERLKEQKEFEF--DIYGYNICIHAFGCWGDLHTSLRL 258
+ L+V L K R + V LKE + ++Y + ICI G G ++ + +
Sbjct: 224 QTYSSLMVGLGK---RRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEI 280
Query: 259 FKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCK 318
K M ++G PD+ TY LI LC K+ A V+E++K H+P+ T+ ++
Sbjct: 281 LKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSD 340
Query: 319 SYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWT 378
+ +D + +SEM+ +G +PD V + L++ + K+ EA + M G+ + T
Sbjct: 341 NRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHT 400
Query: 379 HNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEME 438
+N LI GL R R + A LF +++ G T+ + + + G AL E+M+
Sbjct: 401 YNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMK 460
Query: 439 GRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSK 498
+G ++V ++ L K GR +++ ++D LV D + + ++ K
Sbjct: 461 TKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKV---- 516
Query: 499 RKDYTPMFPYKGDLSEIMSLIG---STNLETDANLGSG------EGDAKDEGSQL-TNSD 548
G++ E + L+ E D + + + D DE ++
Sbjct: 517 -----------GEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMK 565
Query: 549 EWSSSPYM---DKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKG 605
E P + + L + + + L G+ +G T NT
Sbjct: 566 EMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITF---NTLFDCLCKND 622
Query: 606 KLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYN 665
++ LA K+ DMG P +TYN+++ VK G +A ++M + P D T
Sbjct: 623 EVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMKKLVYP-DFVTLC 681
Query: 666 VVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLI-NVLGKAGRFDEANMLFEQMR 724
++ G+ K + A I+ + + + LI ++L +AG D A E++
Sbjct: 682 TLLPGVVKASLIEDAYKIITNFLYNCADQPANLFWEDLIGSILAEAG-IDNAVSFSERLV 740
Query: 725 TSGINPD 731
+GI D
Sbjct: 741 ANGICRD 747
Score = 133 bits (334), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 130/530 (24%), Positives = 236/530 (44%), Gaps = 15/530 (2%)
Query: 249 WGDLHTSLRLFKEMKEK-GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEF 307
+ D +S FK + LV T N +++ L V GK+++ V++ ++ + +
Sbjct: 95 FPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDTN 154
Query: 308 THRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKM 367
T+ I + + A +M+ G + + YN L++ + KSR EA +++ +M
Sbjct: 155 TYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRRM 214
Query: 368 VQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQI 427
+ +G R S T++ L+ GL + ++ L +++ G + TF+I + L R G+I
Sbjct: 215 ILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKI 274
Query: 428 EEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKAD 487
EA +++ M+ G D+VT + L+ + D + + + ++ G D + +
Sbjct: 275 NEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTY--- 331
Query: 488 VEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNS 547
T+ R S +D + K SE+ ++ T L A + G
Sbjct: 332 --ITLLDRFSDNRDLDSV---KQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTL 386
Query: 548 DEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVN----TFLSIFLA 603
D + L C ++ L L + G M + + F+ +
Sbjct: 387 DVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN-MESLGVKPTAYTYIVFIDYYGK 445
Query: 604 KGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIAT 663
G A + FE G+ P N+ + S K G +A + + + D T
Sbjct: 446 SGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVT 505
Query: 664 YNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQM 723
YN++++ K+G D A +L ++M + G DV++ N+LIN L KA R DEA +F +M
Sbjct: 506 YNMMMKCYSKVGEIDEAIKLLSEMM-ENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 724 RTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ + P VVT+NTL+ GK G+++EA + M+ GC PN +T TL
Sbjct: 565 KEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTL 614
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 107/432 (24%), Positives = 198/432 (45%), Gaps = 25/432 (5%)
Query: 77 RPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKID 136
+ I K TY IF+++ G L++ P L M+E V+++ ++ L+ +KS
Sbjct: 146 KRIIKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCT 205
Query: 137 FAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL---------------L 181
A+E+ M G S Y S++V L +++ + M +L ++ +
Sbjct: 206 EAMEVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICI 265
Query: 182 EACNDNTADNSVVESL---------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEF 232
N E L P V L+ AL + + K+VFE++K +
Sbjct: 266 RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRH- 324
Query: 233 EFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALI 292
+ D Y + F DL + + + EM++ G VPD+ T+ L+ LC G +A
Sbjct: 325 KPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFD 384
Query: 293 VWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMF 352
+ ++ G PN T+ +I G + +R+DDA+++F M+ G+ P Y ++
Sbjct: 385 TLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYG 444
Query: 353 KSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGI 412
KS + A + FEKM G+ + N + L + GR A +F LK G D +
Sbjct: 445 KSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSV 504
Query: 413 TFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHI 472
T+++++ + G+I+EA++L+ EM G D++ ++SL+ +K R D ++ +
Sbjct: 505 TYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRM 564
Query: 473 RDGNLVLDVLKW 484
++ L V+ +
Sbjct: 565 KEMKLKPTVVTY 576
Score = 110 bits (275), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 90/340 (26%), Positives = 149/340 (43%), Gaps = 61/340 (17%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + + A +E + ++ + D T+ LL+ KSGKID E+ M
Sbjct: 787 TYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFLLDAYGKSGKIDELFELYKEM 846
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
+ ++ V+ LV+ + A+ + + L+ S + P
Sbjct: 847 STHECEANTITHNIVISGLVKAGNVDDALDLYYDLM----------SDRDFSPTACTYGP 896
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYG-------YNICIHAFGCWGDLHTSLRL 258
L+ L KS R E KQ+FE + + YG YNI I+ FG G+ + L
Sbjct: 897 LIDGLSKSGRLYEAKQLFEGMLD--------YGCRPNCAIYNILINGFGKAGEADAACAL 948
Query: 259 FKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCK 318
FK M ++G+ PDL TY+ L+ LC+VG+V + L ++ELK SG P+ + +II G K
Sbjct: 949 FKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGK 1008
Query: 319 SYRMDDAM------------------------------------KIFSEMQYNGLIPDTV 342
S+R+++A+ KI++E+Q GL P+
Sbjct: 1009 SHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVF 1068
Query: 343 VYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNIL 382
+N+L+ G S K A +++ MV G + T+ L
Sbjct: 1069 TFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108
Score = 84.7 bits (208), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/271 (26%), Positives = 112/271 (41%), Gaps = 48/271 (17%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
+ TACTY + + ++G L E L M + + + +L+ K+G+ D A
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPG 199
+ M + G Y SVLV +
Sbjct: 947 ALFKRMVKEGVRPDLKTY-SVLVDCL---------------------------------- 971
Query: 200 CVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLF 259
C+ R E F+ LKE D+ YN+ I+ G L +L LF
Sbjct: 972 CMV-----------GRVDEGLHYFKELKESG-LNPDVVCYNLIINGLGKSHRLEEALVLF 1019
Query: 260 KEMK-EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCK 318
EMK +G+ PDL+TYNSLI L + G V++A ++ E++ +G EPN FT +I+G
Sbjct: 1020 NEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSL 1079
Query: 319 SYRMDDAMKIFSEMQYNGLIPDTVVYNSLLN 349
S + + A ++ M G P+T Y L N
Sbjct: 1080 SGKPEHAYAVYQTMVTGGFSPNTGTYEQLPN 1110
Score = 82.8 bits (203), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 89/195 (45%), Gaps = 4/195 (2%)
Query: 594 VNTFLSIFLAKGK---LNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLN 650
+ T+ S+ + GK ++ L + +G+ P YT+ + + G N+A+ +L
Sbjct: 223 LQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGKINEAYEILK 282
Query: 651 EMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKA 710
M ++ C D+ TY V+I L + D A + +K MK G D V Y TL++
Sbjct: 283 RMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEK-MKTGRHKPDRVTYITLLDRFSDN 341
Query: 711 GRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTD 770
D + +M G PDVVTF L++ KAG EA L +M D G PN T
Sbjct: 342 RDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTY 401
Query: 771 TTLDFLGREIDRLKD 785
TL + RL D
Sbjct: 402 NTLICGLLRVHRLDD 416
>sp|Q9C8T7|PP101_ARATH Pentatricopeptide repeat-containing protein At1g63330
OS=Arabidopsis thaliana GN=At1g63330 PE=2 SV=2
Length = 559
Score = 187 bits (476), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 139/542 (25%), Positives = 246/542 (45%), Gaps = 49/542 (9%)
Query: 236 IYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWE 295
I+ +N + A + L ++M+ G+ +L+TYN LI C ++ AL +
Sbjct: 10 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 69
Query: 296 ELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSR 355
++ G+EP+ T ++ G C R+ DA+ + +M G PDT+ + +L++G+F
Sbjct: 70 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 129
Query: 356 KVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFS 415
K EA L ++MVQ G + + T+ ++++GL + G + A+ L ++ D + F+
Sbjct: 130 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFN 189
Query: 416 IVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDG 475
++ LC+ +++AL L +EME +G ++VT SSL+ YGRW +L+ + +
Sbjct: 190 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 249
Query: 476 NLVLDVLKWKADVEATMKSRK----SKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLG 531
+ +++ + A ++A +K K K D D+ SLI G
Sbjct: 250 KINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLIN----------G 299
Query: 532 SGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDI 591
D D+ Q+ V DC D+
Sbjct: 300 FCMHDRLDKAKQM--------------FEFMVSKDCFP--------------------DL 325
Query: 592 DMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNE 651
D NT + F ++ +LF + G+ TY +++ G + A V +
Sbjct: 326 DTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQ 385
Query: 652 MGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAG 711
M P DI TY++++ GL G+ + A + D M++ LD+ +Y T+I + KAG
Sbjct: 386 MVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAG 444
Query: 712 RFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDT 771
+ D+ LF + G+ P+VVT+NT+I L+EA+ LK M + G P+ T
Sbjct: 445 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYN 504
Query: 772 TL 773
TL
Sbjct: 505 TL 506
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 104/403 (25%), Positives = 196/403 (48%), Gaps = 29/403 (7%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y+ + T S + C + + +L++ M E D+ TF L+ K A+
Sbjct: 76 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 135
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL----LEACNDNTADNSVVE 195
++D M + G + Y V+ L ++ + LA ++L K+ +EA D N++++
Sbjct: 136 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA--DVVIFNTIID 193
Query: 196 SL----------------------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFE 233
SL P V + L+ L R S+ Q+ + E+K
Sbjct: 194 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK-IN 252
Query: 234 FDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIV 293
++ +N I AF G + +L +M ++ + PD+ TYNSLI C+ ++ A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 294 WEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFK 353
+E + P+ T+ +I+G CKS R++D ++F EM + GL+ DTV Y +L+ G+F
Sbjct: 313 FEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 372
Query: 354 SRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGIT 413
A ++F++MV DGV T++IL+DGL NG+ E A +F ++K +D
Sbjct: 373 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 432
Query: 414 FSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGF 456
++ ++ +C+ G++++ L + +G ++VT ++++ G
Sbjct: 433 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 475
Score = 141 bits (355), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 100/398 (25%), Positives = 197/398 (49%), Gaps = 16/398 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY + +C+ G ++ +LLN M+ + D F +++ K +D A+ + M
Sbjct: 152 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 211
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
E G + PNV Y S++ L + A +L ++E + P V
Sbjct: 212 ETKG--IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-----------KINPNLVTF 258
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
N L+ A K + E +++ + + ++ + DI+ YN I+ F L + ++F+ M
Sbjct: 259 NALIDAFVKEGKFVEAEKLHDDMI-KRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMV 317
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
K PDL TYN+LI+ C +V+D ++ E+ G + T+ +IQG D
Sbjct: 318 SKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 377
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
+A K+F +M +G+ PD + Y+ LL+G+ + K+ +A ++F+ M + ++ + + +I
Sbjct: 378 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 437
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFV 443
+G+ + G+ + + LFC L KG + +T++ ++ LC + ++EA L+++M+ G +
Sbjct: 438 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 497
Query: 444 VDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDV 481
D T ++L+ + G + L++ +R V D
Sbjct: 498 PDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 535
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 133/556 (23%), Positives = 239/556 (42%), Gaps = 66/556 (11%)
Query: 122 FKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL 181
F LL K K D I + + M+ LG S + Y+ ++ R+ Q+ LA+++L K++
Sbjct: 13 FNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLGKMM 72
Query: 182 EACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNI 241
+ + P V + LL GY
Sbjct: 73 KLGYE-----------PSIVTLSSLL-----------------------------NGY-- 90
Query: 242 CIHAFGCWGD-LHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGS 300
C G + ++ L +M E G PD T+ +LI L + K +A+ + + +
Sbjct: 91 ------CHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 144
Query: 301 GHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEA 360
G +PN T+ +++ G CK +D A + ++M+ + D V++N++++ + K R V +A
Sbjct: 145 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 204
Query: 361 CQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQ 420
LF++M G+R + T++ LI L GR A L D+ +K + +TF+ ++
Sbjct: 205 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 264
Query: 421 LCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLD 480
+EG+ EA +L ++M R D+ T +SL+ GF + R D +++ + + + D
Sbjct: 265 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 324
Query: 481 VLKWKADVEATMKSRKSKRKDYTPMFP------YKGDLSEIMSLIGSTNLETDANLGSGE 534
+ + ++ KS++ + D T +F GD +LI L D + + +
Sbjct: 325 LDTYNTLIKGFCKSKRVE--DGTELFREMSHRGLVGDTVTYTTLI--QGLFHDGDCDNAQ 380
Query: 535 GDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMV 594
K S D + S +D L C++ +L K DI +
Sbjct: 381 KVFKQMVSDGVPPDIMTYSILLDGL-------CNNGKLEKALEVFDYMQKSEIKLDIYIY 433
Query: 595 NTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGE 654
T + GK++ LF + GV P TYN+M+S K +A+ +L +M E
Sbjct: 434 TTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 493
Query: 655 KFCPTDIATYNVVIQG 670
D TYN +I+
Sbjct: 494 DGPLPDSGTYNTLIRA 509
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 185/418 (44%), Gaps = 18/418 (4%)
Query: 82 HTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEI 141
H TY+ + CR + +LL M + T LL +I A+ +
Sbjct: 43 HNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 102
Query: 142 LDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLE-ACNDNTADNSVVESLPGC 200
+D M E+G + +++ L + A++++ ++++ C N VV
Sbjct: 103 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV------ 156
Query: 201 VACNELLVALRKSDRRSEFKQVFERLK--EQKEFEFDIYGYNICIHAFGCWGDLHTSLRL 258
N L +R + F L E + E D+ +N I + + + +L L
Sbjct: 157 --VNGLC-------KRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNL 207
Query: 259 FKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCK 318
FKEM+ KG+ P++ TY+SLI LC G+ DA + ++ PN T +I K
Sbjct: 208 FKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVK 267
Query: 319 SYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWT 378
+ +A K+ +M + PD YNSL+NG ++ +A Q+FE MV T
Sbjct: 268 EGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDT 327
Query: 379 HNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEME 438
+N LI G ++ R E LF ++ +G D +T++ ++ L +G + A ++ ++M
Sbjct: 328 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 387
Query: 439 GRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRK 496
G D++T S LL G G+ + + +++ + LD+ + +E K+ K
Sbjct: 388 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 445
Score = 88.6 bits (218), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 105/450 (23%), Positives = 182/450 (40%), Gaps = 69/450 (15%)
Query: 338 IPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYT 397
+P +N LL+ + K +K L EKM + G+ + +T+NILI+
Sbjct: 7 LPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILIN------------- 53
Query: 398 LFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFH 457
C CR QI AL L+ +M G+ +VT+SSLL G+
Sbjct: 54 --C--------------------FCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYC 91
Query: 458 KYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMS 517
R L+ + + D + + + K+ SE ++
Sbjct: 92 HGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKA---------------SEAVA 136
Query: 518 LIG-------STNLETDANLGSG---EGDAKDEGSQLTNSDEWSSSP----YMDKLADQV 563
L+ NL T + +G GD D L N E + + + D +
Sbjct: 137 LVDRMVQRGCQPNLVTYGVVVNGLCKRGDI-DLAFNLLNKMEAAKIEADVVIFNTIIDSL 195
Query: 564 KSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVH 623
H +L + + +G ++ ++ +S + G+ + A +L + ++
Sbjct: 196 CKYRHVDDALNLFKEMETKGI---RPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKIN 252
Query: 624 PVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTI 683
P T+N+++ +FVK+G F +A + ++M ++ DI TYN +I G R D A +
Sbjct: 253 PNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQM 312
Query: 684 LDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNG 743
+ M + D+ YNTLI K+ R ++ LF +M G+ D VT+ TLI+
Sbjct: 313 FE-FMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLF 371
Query: 744 KAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
G A K M+ G P+ +T + L
Sbjct: 372 HDGDCDNAQKVFKQMVSDGVPPDIMTYSIL 401
Score = 33.9 bits (76), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 72 WCS-SLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCI 130
+CS SL+ + K TY+ + +C L+E +LL M+ED + DS T+ L+ +
Sbjct: 453 FCSLSLKGV-KPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSGTYNTLIRAHL 511
Query: 131 KSGKIDFAIEILDYME 146
+ G + E++ M
Sbjct: 512 RDGDKAASAELIREMR 527
>sp|Q9LYZ9|PP362_ARATH Pentatricopeptide repeat-containing protein At5g02860
OS=Arabidopsis thaliana GN=At5g02860 PE=2 SV=1
Length = 819
Score = 186 bits (472), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 173/690 (25%), Positives = 298/690 (43%), Gaps = 51/690 (7%)
Query: 120 ETFKLLLEPCIKSGKIDFAI-EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILF 178
+ + L+EP SG++D + E+ + ++ S S + + L L K+ LA+
Sbjct: 101 QVLRSLIEPNFDSGQLDSVLSELFEPFKDKPESTSSELL-AFLKGLGFHKKFDLALRAFD 159
Query: 179 KLLEACN-DNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIY 237
++ + + DNSVV + + L K R S +F L+E F D+Y
Sbjct: 160 WFMKQKDYQSMLDNSVVAII---------ISMLGKEGRVSSAANMFNGLQEDG-FSLDVY 209
Query: 238 GYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALI-VWEE 296
Y I AF G ++ +FK+M+E G P L TYN ++ V +G + + + E+
Sbjct: 210 SYTSLISAFANSGRYREAVNVFKKMEEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEK 269
Query: 297 LKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRK 356
+K G P+ +T+ +I C + +A ++F EM+ G D V YN+LL+ KS +
Sbjct: 270 MKSDGIAPDAYTYNTLITCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHR 329
Query: 357 VMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSI 416
EA ++ +MV +G S T+N LI R+G + A L + +KG D T++
Sbjct: 330 PKEAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTT 389
Query: 417 VVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGN 476
++ R G++E A+ + EEM G ++ T ++ + + G++ ++ I
Sbjct: 390 LLSGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCG 449
Query: 477 LVLDVLKWKA----------DVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLET 526
L D++ W D E + ++ KR + P L S GS
Sbjct: 450 LSPDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAM 509
Query: 527 -------DANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLF--SLAR 577
DA + + L W S + LA+ C ++L SL
Sbjct: 510 TVYRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV--LAEMEDGRCKPNELTYCSLLH 567
Query: 578 GLRVQGKGMGTFDIDMVNTFLSIFLAKG----KLNLAC----------KLFEIFTDMGVH 623
GK +G + + + L L C + F + G
Sbjct: 568 AY-ANGKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFS 626
Query: 624 PVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTI 683
P T NSM+S + ++ +A GVL+ M E+ +ATYN ++ + + I
Sbjct: 627 PDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEI 686
Query: 684 LDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNG 743
L +++ +G D++ YNT+I + R +A+ +F +MR SGI PDV+T+NT I
Sbjct: 687 LREILAKGIK-PDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYA 745
Query: 744 KAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+EA ++ M+ GC PN T ++
Sbjct: 746 ADSMFEEAIGVVRYMIKHGCRPNQNTYNSI 775
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 144/592 (24%), Positives = 266/592 (44%), Gaps = 53/592 (8%)
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSL-RLFKEMKE 264
L+ A S R E VF+++ E+ + + YN+ ++ FG G + L ++MK
Sbjct: 214 LISAFANSGRYREAVNVFKKM-EEDGCKPTLITYNVILNVFGKMGTPWNKITSLVEKMKS 272
Query: 265 KGLVPDLHTYNSLIQVLCVVGKV-KDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
G+ PD +TYN+LI C G + ++A V+EE+K +G ++ T+ ++ KS+R
Sbjct: 273 DGIAPDAYTYNTLI-TCCKRGSLHQEAAQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPK 331
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
+AMK+ +EM NG P V YNSL++ + + EA +L +M + G + +T+ L+
Sbjct: 332 EAMKVLNEMVLNGFSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLL 391
Query: 384 DGLFRNGRAEAAYTLFCDLKK-------------------KGKFV--------------- 409
G R G+ E+A ++F +++ +GKF
Sbjct: 392 SGFERAGKVESAMSIFEEMRNAGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS 451
Query: 410 -DGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERL 468
D +T++ ++ + G E + +EM+ GFV + T ++L+ + + G ++ +
Sbjct: 452 PDIVTWNTLLAVFGQNGMDSEVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 469 MKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDA 528
+ + D + D+ + + A + ++ + L+E+ N T
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKV--------LAEMEDGRCKPNELTYC 563
Query: 529 NLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKS---DCHSSQLFSLARGLRVQGKG 585
+L + K+ G + ++E S ++ A +K+ C L A + K
Sbjct: 564 SLLHAYANGKEIGLMHSLAEEVYSG-VIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKE 622
Query: 586 MG-TFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQ 644
G + DI +N+ +SI+ + + A + + + G P TYNS+M + F +
Sbjct: 623 RGFSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGK 682
Query: 645 AWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLI 704
+ +L E+ K DI +YN VI + R AS I + M+ G DV+ YNT I
Sbjct: 683 SEEILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSE-MRNSGIVPDVITYNTFI 741
Query: 705 NVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLK 756
F+EA + M G P+ T+N++++ K R EA F++
Sbjct: 742 GSYAADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVE 793
Score = 152 bits (385), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 162/634 (25%), Positives = 266/634 (41%), Gaps = 53/634 (8%)
Query: 90 IFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELG 149
I + + G + ++ N +QED +D ++ L+ SG+ A+ + MEE G
Sbjct: 179 IISMLGKEGRVSSAANMFNGLQEDGFSLDVYSYTSLISAFANSGRYREAVNVFKKMEEDG 238
Query: 150 TSLSPNVYDSVL-------------VSLVRK-KQLGLAMSILF--KLLEACNDNTADN-- 191
+ Y+ +L SLV K K G+A L+ C +
Sbjct: 239 CKPTLITYNVILNVFGKMGTPWNKITSLVEKMKSDGIAPDAYTYNTLITCCKRGSLHQEA 298
Query: 192 -SVVESLPGC------VACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIH 244
V E + V N LL KS R E +V + F I YN I
Sbjct: 299 AQVFEEMKAAGFSYDKVTYNALLDVYGKSHRPKEAMKVLNEMVLNG-FSPSIVTYNSLIS 357
Query: 245 AFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEP 304
A+ G L ++ L +M EKG PD+ TY +L+ GKV+ A+ ++EE++ +G +P
Sbjct: 358 AYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRNAGCKP 417
Query: 305 NEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLF 364
N T I+ + + MKIF E+ GL PD V +N+LL ++ E +F
Sbjct: 418 NICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLSPDIVTWNTLLAVFGQNGMDSEVSGVF 477
Query: 365 EKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCRE 424
++M + G T N LI R G E A T++ + G D T++ V+ L R
Sbjct: 478 KEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVLAALARG 537
Query: 425 GQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDG--------- 475
G E++ +++ EME + +T SLL + L + + G
Sbjct: 538 GMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIGLMHSLAEEVYSGVIEPRAVLL 597
Query: 476 -NLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGE 534
LVL K EA + K + ++P L+ ++S+ G + AN G
Sbjct: 598 KTLVLVCSKCDLLPEAERAFSELKERGFSPDI---TTLNSMVSIYGRRQMVAKAN---GV 651
Query: 535 GDAKDEGSQLTNSDEWSSSPYM-DKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDM 593
D E + ++S YM + AD KS+ ++ LA+G++ DI
Sbjct: 652 LDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREI--LAKGIKP--------DIIS 701
Query: 594 VNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMG 653
NT + + ++ A ++F + G+ P TYN+ + S+ F +A GV+ M
Sbjct: 702 YNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSYAADSMFEEAIGVVRYMI 761
Query: 654 EKFCPTDIATYNVVIQGLGKMGRADLASTILDKL 687
+ C + TYN ++ G K+ R D A ++ L
Sbjct: 762 KHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDL 795
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 87/352 (24%), Positives = 158/352 (44%), Gaps = 15/352 (4%)
Query: 52 VLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQ 111
+L V G+N +DS F R + T++ + R G E+ ++ M
Sbjct: 460 LLAVFGQNGMDSEVSGVFKEM---KRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRML 516
Query: 112 EDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLG 171
+ V D T+ +L + G + + ++L ME+ + Y S+L + K++G
Sbjct: 517 DAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYANGKEIG 576
Query: 172 LAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKE 231
L S+ ++ + V+E P V L++ K D E ++ F LKE +
Sbjct: 577 LMHSLAEEVY---------SGVIE--PRAVLLKTLVLVCSKCDLLPEAERAFSELKE-RG 624
Query: 232 FEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDAL 291
F DI N + +G + + + MKE+G P + TYNSL+ + +
Sbjct: 625 FSPDITTLNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSE 684
Query: 292 IVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGM 351
+ E+ G +P+ ++ +I C++ RM DA +IFSEM+ +G++PD + YN+ +
Sbjct: 685 EILREILAKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFIGSY 744
Query: 352 FKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLK 403
EA + M++ G R + T+N ++DG + R + A DL+
Sbjct: 745 AADSMFEEAIGVVRYMIKHGCRPNQNTYNSIVDGYCKLNRKDEAKLFVEDLR 796
Score = 110 bits (275), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 91/410 (22%), Positives = 172/410 (41%), Gaps = 49/410 (11%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
+ + TY+ + R G L+E L N M E D T+ LL ++GK++ A+
Sbjct: 345 FSPSIVTYNSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAM 404
Query: 140 EILDYMEELGTSLSPNVYD-SVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLP 198
I + M G PN+ + + + + M +F + C + P
Sbjct: 405 SIFEEMRNAGC--KPNICTFNAFIKMYGNRGKFTEMMKIFDEINVCGLS----------P 452
Query: 199 GCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRL 258
V N LL ++ SE VF+ +K + F + +N I A+ G ++ +
Sbjct: 453 DIVTWNTLLAVFGQNGMDSEVSGVFKEMK-RAGFVPERETFNTLISAYSRCGSFEQAMTV 511
Query: 259 FKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTH--------- 309
++ M + G+ PDL TYN+++ L G + + V E++ +PNE T+
Sbjct: 512 YRRMLDAGVTPDLSTYNTVLAALARGGMWEQSEKVLAEMEDGRCKPNELTYCSLLHAYAN 571
Query: 310 --------------------------RIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVV 343
+ ++ C K + +A + FSE++ G PD
Sbjct: 572 GKEIGLMHSLAEEVYSGVIEPRAVLLKTLVLVCSKCDLLPEAERAFSELKERGFSPDITT 631
Query: 344 YNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLK 403
NS+++ + + V +A + + M + G S T+N L+ R+ + + ++
Sbjct: 632 LNSMVSIYGRRQMVAKANGVLDYMKERGFTPSMATYNSLMYMHSRSADFGKSEEILREIL 691
Query: 404 KKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLL 453
KG D I+++ V+ CR ++ +A R+ EM G V D++T ++ +
Sbjct: 692 AKGIKPDIISYNTVIYAYCRNTRMRDASRIFSEMRNSGIVPDVITYNTFI 741
Score = 96.7 bits (239), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 94/185 (50%), Gaps = 2/185 (1%)
Query: 595 NTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGE 654
N+ +S + G L+ A +L + G P +TY +++S F + G A + EM
Sbjct: 353 NSLISAYARDGMLDEAMELKNQMAEKGTKPDVFTYTTLLSGFERAGKVESAMSIFEEMRN 412
Query: 655 KFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFD 714
C +I T+N I+ G G+ I D++ G D+V +NTL+ V G+ G
Sbjct: 413 AGCKPNICTFNAFIKMYGNRGKFTEMMKIFDEI-NVCGLSPDIVTWNTLLAVFGQNGMDS 471
Query: 715 EANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT-DTTL 773
E + +F++M+ +G P+ TFNTLI + G ++A + MLD+G TP+ T +T L
Sbjct: 472 EVSGVFKEMKRAGFVPERETFNTLISAYSRCGSFEQAMTVYRRMLDAGVTPDLSTYNTVL 531
Query: 774 DFLGR 778
L R
Sbjct: 532 AALAR 536
>sp|Q9SXD8|PPR90_ARATH Pentatricopeptide repeat-containing protein At1g62590
OS=Arabidopsis thaliana GN=At1g62590 PE=2 SV=1
Length = 634
Score = 182 bits (463), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 139/540 (25%), Positives = 243/540 (45%), Gaps = 45/540 (8%)
Query: 236 IYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWE 295
I +N + A + L ++M+ +V L+TYN LI C ++ AL +
Sbjct: 85 IVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLG 144
Query: 296 ELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSR 355
++ G+EP+ T ++ G C R+ DA+ + +M G PDT+ + +L++G+F
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 356 KVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFS 415
K EA L ++MVQ G + + T+ ++++GL + G + A L ++ D + F+
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFN 264
Query: 416 IVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDG 475
++ LC+ +++AL L +EME +G ++VT SSL+ YGRW +L+ + +
Sbjct: 265 TIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK 324
Query: 476 NLVLDVLKWKADVEATMKSRK--SKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSG 533
+ +++ + A ++A +K K K Y M D +I + N G
Sbjct: 325 KINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSID-PDIFTYNSLVN-------GFC 376
Query: 534 EGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDM 593
D D+ Q+ V DC D+
Sbjct: 377 MHDRLDKAKQM--------------FEFMVSKDCFP--------------------DVVT 402
Query: 594 VNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMG 653
NT + F ++ +LF + G+ TY +++ G + A V +M
Sbjct: 403 YNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462
Query: 654 EKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRF 713
P DI TY++++ GL G+ + A + D M++ LD+ +Y T+I + KAG+
Sbjct: 463 SDGVPPDIMTYSILLDGLCNNGKLEKALEVFD-YMQKSEIKLDIYIYTTMIEGMCKAGKV 521
Query: 714 DEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
D+ LF + G+ P+VVT+NT+I L+EA+ LK M + G PN T TL
Sbjct: 522 DDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTL 581
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 103/403 (25%), Positives = 197/403 (48%), Gaps = 29/403 (7%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y+ + T S + C + + +L++ M E D+ TF L+ K A+
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL----LEACNDNTADNSVVE 195
++D M + G + Y V+ L ++ LA+++L K+ +EA D N++++
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEA--DVVIFNTIID 268
Query: 196 SL----------------------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFE 233
SL P V + L+ L R S+ Q+ + E+K
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKK-IN 327
Query: 234 FDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIV 293
++ +N I AF G + +L+ +M ++ + PD+ TYNSL+ C+ ++ A +
Sbjct: 328 PNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQM 387
Query: 294 WEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFK 353
+E + P+ T+ +I+G CKS R++D ++F EM + GL+ DTV Y +L+ G+F
Sbjct: 388 FEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFH 447
Query: 354 SRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGIT 413
A ++F++MV DGV T++IL+DGL NG+ E A +F ++K +D
Sbjct: 448 DGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYI 507
Query: 414 FSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGF 456
++ ++ +C+ G++++ L + +G ++VT ++++ G
Sbjct: 508 YTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGL 550
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 97/398 (24%), Positives = 197/398 (49%), Gaps = 16/398 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY + +C+ G + +LLN M+ + D F +++ K +D A+ + M
Sbjct: 227 TYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEM 286
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
E G + PNV Y S++ L + A +L ++E + P V
Sbjct: 287 ETKG--IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEK-----------KINPNLVTF 333
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
N L+ A K + E +++++ + ++ + DI+ YN ++ F L + ++F+ M
Sbjct: 334 NALIDAFVKEGKFVEAEKLYDDMI-KRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMV 392
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
K PD+ TYN+LI+ C +V+D ++ E+ G + T+ +IQG D
Sbjct: 393 SKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCD 452
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
+A K+F +M +G+ PD + Y+ LL+G+ + K+ +A ++F+ M + ++ + + +I
Sbjct: 453 NAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMI 512
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFV 443
+G+ + G+ + + LFC L KG + +T++ ++ LC + ++EA L+++M+ G +
Sbjct: 513 EGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPL 572
Query: 444 VDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDV 481
+ T ++L+ + G + L++ +R V D
Sbjct: 573 PNSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDA 610
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 92/398 (23%), Positives = 192/398 (48%), Gaps = 12/398 (3%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
++ + + + + V SL MQ ++V T+ +L+ + +I A+ +L M
Sbjct: 88 FNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMM 147
Query: 147 ELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNEL 206
+LG S S+L K++ A++++ +++E + P + L
Sbjct: 148 KLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVE-----------MGYRPDTITFTTL 196
Query: 207 LVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKG 266
+ L ++ SE + +R+ Q+ + ++ Y + ++ GD +L L +M+
Sbjct: 197 IHGLFLHNKASEAVALVDRM-VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAK 255
Query: 267 LVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAM 326
+ D+ +N++I LC V DAL +++E++ G PN T+ +I C R DA
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315
Query: 327 KIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGL 386
++ S+M + P+ V +N+L++ K K +EA +L++ M++ + +T+N L++G
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375
Query: 387 FRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDL 446
+ R + A +F + K F D +T++ ++ C+ ++E+ L EM RG V D
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435
Query: 447 VTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKW 484
VT ++L+ G G D +++ K + + D++ +
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTY 473
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 135/590 (22%), Positives = 247/590 (41%), Gaps = 68/590 (11%)
Query: 91 FRTVCRAGF----LEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
+R + R G L++ L M + + F LL K K D I + + M+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 147 ELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNEL 206
L Y+ ++ R+ Q+ LA+++L K+++ + P V + L
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYE-----------PSIVTLSSL 161
Query: 207 LVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKG 266
L R S+ ++ L +M E G
Sbjct: 162 LNGYCHGKRISD------------------------------------AVALVDQMVEMG 185
Query: 267 LVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAM 326
PD T+ +LI L + K +A+ + + + G +PN T+ +++ G CK D A+
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLAL 245
Query: 327 KIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGL 386
+ ++M+ + D V++N++++ + K R V +A LF++M G+R + T++ LI L
Sbjct: 246 NLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCL 305
Query: 387 FRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDL 446
GR A L D+ +K + +TF+ ++ +EG+ EA +L ++M R D+
Sbjct: 306 CSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDI 365
Query: 447 VTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMF 506
T +SL+ GF + R D +++ + + + DV+ + ++ KS++ + D T +F
Sbjct: 366 FTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVE--DGTELF 423
Query: 507 ------PYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLA 560
GD +LI L D + + + K S D + S +D L
Sbjct: 424 REMSHRGLVGDTVTYTTLI--QGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGL- 480
Query: 561 DQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDM 620
C++ +L K DI + T + GK++ LF +
Sbjct: 481 ------CNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLK 534
Query: 621 GVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQG 670
GV P TYN+M+S K +A+ +L +M E + TYN +I+
Sbjct: 535 GVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSGTYNTLIRA 584
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 101/416 (24%), Positives = 187/416 (44%), Gaps = 14/416 (3%)
Query: 82 HTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEI 141
H TY+ + CR + +LL M + T LL +I A+ +
Sbjct: 118 HGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVAL 177
Query: 142 LDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLE-ACNDNTADNSVVESLPGC 200
+D M E+G + +++ L + A++++ ++++ C N VV + G
Sbjct: 178 VDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV--VNGL 235
Query: 201 VACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFK 260
+ +AL ++ E + E D+ +N I + + + +L LFK
Sbjct: 236 CKRGDTDLALNLLNKM-----------EAAKIEADVVIFNTIIDSLCKYRHVDDALNLFK 284
Query: 261 EMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSY 320
EM+ KG+ P++ TY+SLI LC G+ DA + ++ PN T +I K
Sbjct: 285 EMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEG 344
Query: 321 RMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHN 380
+ +A K++ +M + PD YNSL+NG ++ +A Q+FE MV T+N
Sbjct: 345 KFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYN 404
Query: 381 ILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGR 440
LI G ++ R E LF ++ +G D +T++ ++ L +G + A ++ ++M
Sbjct: 405 TLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSD 464
Query: 441 GFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRK 496
G D++T S LL G G+ + + +++ + LD+ + +E K+ K
Sbjct: 465 GVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGK 520
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 9/168 (5%)
Query: 606 KLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIA--- 662
KL+ A LF P +N ++S+ K F+ V+ +GEK +I
Sbjct: 65 KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFD----VVISLGEKMQRLEIVHGL 120
Query: 663 -TYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFE 721
TYN++I + + LA +L K+MK G +V ++L+N R +A L +
Sbjct: 121 YTYNILINCFCRRSQISLALALLGKMMKLGYEP-SIVTLSSLLNGYCHGKRISDAVALVD 179
Query: 722 QMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
QM G PD +TF TLI + EA + M+ GC PN VT
Sbjct: 180 QMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVT 227
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 68/149 (45%), Gaps = 9/149 (6%)
Query: 629 YNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLM 688
Y ++ + + + A G+ M + I +N ++ + KM + D+ ++ +K+
Sbjct: 53 YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112
Query: 689 KQGGGYLDVV----MYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGK 744
+ L++V YN LIN + + A L +M G P +VT ++L+
Sbjct: 113 R-----LEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCH 167
Query: 745 AGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
R+ +A + M++ G P+ +T TTL
Sbjct: 168 GKRISDAVALVDQMVEMGYRPDTITFTTL 196
>sp|Q9CAM8|PP100_ARATH Pentatricopeptide repeat-containing protein At1g63150
OS=Arabidopsis thaliana GN=At1g63150 PE=2 SV=1
Length = 629
Score = 179 bits (455), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 143/540 (26%), Positives = 242/540 (44%), Gaps = 48/540 (8%)
Query: 236 IYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWE 295
I +N + A + L ++M+ G+ DL+TY+ I C ++ AL V
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 296 ELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSR 355
++ G+EP+ T ++ G C S R+ DA+ + +M G PDT + +L++G+F
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 356 KVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFS 415
K EA L ++MVQ G + T+ +++GL + G + A L ++ + + F+
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFN 262
Query: 416 IVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDG 475
++ LC+ +E A+ L EME +G ++VT +SL+ YGRW RL+ ++ +
Sbjct: 263 TIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK 322
Query: 476 NLVLDVLKWKADVEATMKSRK--SKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSG 533
+ +V+ + A ++A K K K + M D I + NL + G
Sbjct: 323 KINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTI-----TYNLLIN---GFC 374
Query: 534 EGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDM 593
+ DE Q+ V DC +I
Sbjct: 375 MHNRLDEAKQM--------------FKFMVSKDCLP--------------------NIQT 400
Query: 594 VNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMG 653
NT ++ F ++ +LF + G+ TY +++ F + G + A V +M
Sbjct: 401 YNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMV 460
Query: 654 EKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRF 713
PTDI TY++++ GL G+ D A I K +++ L++ +YNT+I + KAG+
Sbjct: 461 SNRVPTDIMTYSILLHGLCSYGKLDTALVIF-KYLQKSEMELNIFIYNTMIEGMCKAGKV 519
Query: 714 DEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
EA LF + I PDVVT+NT+I L+EA + M + G PN T TL
Sbjct: 520 GEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTLPNSGTYNTL 576
Score = 127 bits (320), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 99/416 (23%), Positives = 187/416 (44%), Gaps = 14/416 (3%)
Query: 82 HTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEI 141
H TYS CR L ++L M + D T LL S +I A+ +
Sbjct: 116 HDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVAL 175
Query: 142 LDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLE-ACNDNTADNSVVESLPGC 200
+D M E+G + +++ L + A++++ ++++ C + V + G
Sbjct: 176 VDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV--VNGL 233
Query: 201 VACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFK 260
++ +AL ++ E + ++ +N I + + + ++ LF
Sbjct: 234 CKRGDIDLALNLLNKM-----------EAARIKANVVIFNTIIDSLCKYRHVEVAVDLFT 282
Query: 261 EMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSY 320
EM+ KG+ P++ TYNSLI LC G+ DA + + PN T +I K
Sbjct: 283 EMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEG 342
Query: 321 RMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHN 380
++ +A K+ EM + PDT+ YN L+NG ++ EA Q+F+ MV + T+N
Sbjct: 343 KLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYN 402
Query: 381 ILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGR 440
LI+G + R E LF ++ ++G + +T++ ++ + G + A + ++M
Sbjct: 403 TLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSN 462
Query: 441 GFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRK 496
D++T S LL G YG+ D + K+++ + L++ + +E K+ K
Sbjct: 463 RVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGK 518
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 99/402 (24%), Positives = 192/402 (47%), Gaps = 30/402 (7%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y+ T S + C + + + +L++ M E D+ TF L+ K A+
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACN---DNTADNSVVES 196
++D M + G Y +V+ L ++ + LA+++L K+ EA + N++++S
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM-EAARIKANVVIFNTIIDS 267
Query: 197 L----------------------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEF 234
L P V N L+ L R S+ ++ + E+K
Sbjct: 268 LCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKK-INP 326
Query: 235 DIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVW 294
++ +N I AF G L + +L +EM ++ + PD TYN LI C+ ++ +A ++
Sbjct: 327 NVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMF 386
Query: 295 EELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKS 354
+ + PN T+ +I G CK R++D +++F EM GL+ +TV Y +++ G F++
Sbjct: 387 KFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQA 446
Query: 355 RKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITF 414
A +F++MV + V T T++IL+ GL G+ + A +F L+K ++ +
Sbjct: 447 GDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIY 506
Query: 415 SIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGF 456
+ ++ +C+ G++ EA L + + D+VT ++++ G
Sbjct: 507 NTMIEGMCKAGKVGEAWDLFCSLSIKP---DVVTYNTMISGL 545
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 105/415 (25%), Positives = 189/415 (45%), Gaps = 55/415 (13%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY + +C+ G ++ +LLN M+ + + F +++ K ++ A+++ M
Sbjct: 225 TYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEM 284
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
E G + PNV Y+S++ L + A +L +LE + P V
Sbjct: 285 ETKG--IRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEK-----------KINPNVVTF 331
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
N L+ A K + E +++ E + Q+ + D YN+ I+ F L + ++FK M
Sbjct: 332 NALIDAFFKEGKLVEAEKLHEEMI-QRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMV 390
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
K +P++ TYN+LI C +V+D + ++ E+ G N T+ IIQG ++ D
Sbjct: 391 SKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
A +F +M N + D + Y+ LL+G+ K+ A +F+ + + + + + +N +I
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEA------------- 430
+G+ + G+ A+ LFC L K D +T++ ++ LC + ++EA
Sbjct: 511 EGMCKAGKVGEAWDLFCSLSIKP---DVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 431 -------------LR---------LVEEMEGRGFVVDLVTISSLLIGFHKYGRWD 463
LR L++EM GFV D TIS + H GR D
Sbjct: 568 PNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVTNMLHD-GRLD 621
Score = 112 bits (280), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 169/358 (47%), Gaps = 24/358 (6%)
Query: 76 LRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKI 135
+RP TY+ + +C G + LL++M E + + TF L++ K GK+
Sbjct: 289 IRP----NVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKL 344
Query: 136 DFAIEILDYMEELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSV 193
A ++ + E + S+ P+ Y+ ++ +L A +FK + +
Sbjct: 345 VEAEKL--HEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQ-MFKFMVS---------- 391
Query: 194 VESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLH 253
+ LP N L+ K R + ++F + Q+ + Y I F GD
Sbjct: 392 KDCLPNIQTYNTLINGFCKCKRVEDGVELFREM-SQRGLVGNTVTYTTIIQGFFQAGDCD 450
Query: 254 TSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIII 313
++ +FK+M + D+ TY+ L+ LC GK+ AL++++ L+ S E N F + +I
Sbjct: 451 SAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMI 510
Query: 314 QGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVR 373
+G CK+ ++ +A +F + + PD V YN++++G+ R + EA LF KM +DG
Sbjct: 511 EGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGTL 567
Query: 374 TSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEAL 431
+ T+N LI R+ A+ L +++ G D T S+V + +G+++++
Sbjct: 568 PNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTISLVT-NMLHDGRLDKSF 624
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Query: 606 KLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYN 665
K++ A LF P +N ++S+ K F + +M D+ TY+
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 666 VVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRT 725
+ I + + LA +L K+MK G D+V ++L+N + R +A L +QM
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEP-DIVTLSSLLNGYCHSKRISDAVALVDQMVE 181
Query: 726 SGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
G PD TF TLI + EA + M+ GC P+ VT T+
Sbjct: 182 MGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTV 229
>sp|Q9SUD8|PP340_ARATH Pentatricopeptide repeat-containing protein At4g28010
OS=Arabidopsis thaliana GN=At4g28010 PE=2 SV=1
Length = 704
Score = 177 bits (449), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 181/664 (27%), Positives = 309/664 (46%), Gaps = 64/664 (9%)
Query: 119 SETFKLLLEPCIKSG-KIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSIL 177
SET L C S ++ A+ + + G+SL+ ++++ LVR + LA S
Sbjct: 37 SETETKLRSLCEDSNPQLKNAVSVFQQAVDSGSSLAF-AGNNLMAKLVRSRNHELAFSFY 95
Query: 178 FKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIY 237
K+LE +T N V SL G + C V +RK+ F L ++ F F++Y
Sbjct: 96 RKMLET---DTFINFV--SLSGLLEC---YVQMRKTG----FAFGVLALMLKRGFAFNVY 143
Query: 238 GYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEEL 297
+NI + + ++ L +EM+ L+PD+ +YN++I+ C +++ AL + E+
Sbjct: 144 NHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEM 203
Query: 298 KGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKV 357
KGSG + T I+I CK+ +MD+AM EM++ GL D VVY SL+ G ++
Sbjct: 204 KGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGEL 263
Query: 358 MEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIV 417
LF+++++ G T+N LI G + G+ + A +F + ++G + T++ +
Sbjct: 264 DRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGL 323
Query: 418 VLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNL 477
+ LC G+ +EAL+L+ M + + VT + ++ K +DG L
Sbjct: 324 IDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIII---------------NKLCKDG-L 367
Query: 478 VLDVLKWKADVEATMKSRKSKRKDYT-----PMFPYKGDLSEIMSLIGSTNLETDANLGS 532
V D + ++ MK R+++ + T KGDL E L+
Sbjct: 368 VADAV----EIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLM---------- 413
Query: 533 GEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDID 592
KD S T+ D S + + L C ++L + + +G D
Sbjct: 414 ----LKD--SSYTDPDVISYNALIHGL-------CKENRLHQALDIYDLLVEKLGAGDRV 460
Query: 593 MVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEM 652
N L+ L G +N A +L++ +D + + TY +M+ F K G N A G+L +M
Sbjct: 461 TTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM 520
Query: 653 GEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGR 712
+ YN ++ L K G D A + ++ M++ + DVV +N +I+ KAG
Sbjct: 521 RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEE-MQRDNNFPDVVSFNIMIDGSLKAGD 579
Query: 713 FDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPN-HVTDT 771
A L M +G++PD+ T++ LI K G L EA F M+DSG P+ H+ D+
Sbjct: 580 IKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDS 639
Query: 772 TLDF 775
L +
Sbjct: 640 VLKY 643
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 145/595 (24%), Positives = 254/595 (42%), Gaps = 90/595 (15%)
Query: 86 TYSH--IFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILD 143
Y+H + + +CR + SLL M+ + ++ D ++ ++ + +++ A+E+ +
Sbjct: 142 VYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELAN 201
Query: 144 YMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSIL----FKLLEACNDNTADNSVVESL-P 198
M+ G S S + ++ + + ++ AM L F LE AD V SL
Sbjct: 202 EMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLE------ADLVVYTSLIR 255
Query: 199 GCVACNELLVALRKSDR-RSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLR 257
G C EL DR ++ F +V ER YN I F G L +
Sbjct: 256 GFCDCGEL-------DRGKALFDEVLERGDSPCAIT-----YNTLIRGFCKLGQLKEASE 303
Query: 258 LFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCC 317
+F+ M E+G+ P+++TY LI LC VGK K+AL + + EPN T+ III C
Sbjct: 304 IFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLC 363
Query: 318 KSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRT--S 375
K + DA++I M+ PD + YN LL G+ + EA +L M++D T
Sbjct: 364 KDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPD 423
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVE 435
++N LI GL + R A ++ L +K D +T +I++ + G + +A+ L +
Sbjct: 424 VISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWK 483
Query: 436 EMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIR---------DGNLVLDVLKWKA 486
++ V + T ++++ GF K G + + L+ +R D N +L L +
Sbjct: 484 QISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEG 543
Query: 487 DVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTN 546
++ + + ++D FP + S N+ D +L + GD K S L
Sbjct: 544 SLDQAWRLFEEMQRDNN--FPD----------VVSFNIMIDGSLKA--GDIKSAESLLVG 589
Query: 547 SDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGK 606
SP LF+ ++ ++N FL + G
Sbjct: 590 MSRAGLSP----------------DLFTYSK---------------LINRFLKL----GY 614
Query: 607 LNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDI 661
L+ A F+ D G P + +S++ + +G ++ L E+ +K DI
Sbjct: 615 LDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDK----LTELVKKLVDKDI 665
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 103/399 (25%), Positives = 179/399 (44%), Gaps = 14/399 (3%)
Query: 84 ACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILD 143
A TY+ + R C+ G L+E + M E V + T+ L++ GK A+++L+
Sbjct: 282 AITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLN 341
Query: 144 YMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSI--LFKLLEACNDNTADNSVVESLPGCV 201
M E + Y+ ++ L + + A+ I L K DN N ++ L
Sbjct: 342 LMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCA-- 399
Query: 202 ACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKE 261
K D K ++ LK+ + D+ YN IH LH +L ++
Sbjct: 400 ----------KGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDL 449
Query: 262 MKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYR 321
+ EK D T N L+ G V A+ +W+++ S N T+ +I G CK+
Sbjct: 450 LVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGM 509
Query: 322 MDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNI 381
++ A + +M+ + L P YN LL+ + K + +A +LFE+M +D + NI
Sbjct: 510 LNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNI 569
Query: 382 LIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRG 441
+IDG + G ++A +L + + G D T+S ++ + + G ++EA+ ++M G
Sbjct: 570 MIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSG 629
Query: 442 FVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLD 480
F D S+L G D L+K + D ++VLD
Sbjct: 630 FEPDAHICDSVLKYCISQGETDKLTELVKKLVDKDIVLD 668
Score = 68.9 bits (167), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/285 (20%), Positives = 124/285 (43%), Gaps = 12/285 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
+Y+ + +C+ L + + + + E D T +LL +K+G ++ A+E+ +
Sbjct: 426 SYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQI 485
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
+ + + Y +++ + L +A +L K+ V E P N
Sbjct: 486 SDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKM-----------RVSELQPSVFDYNC 534
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
LL +L K + ++FE ++ F D+ +NI I GD+ ++ L M
Sbjct: 535 LLSSLCKEGSLDQAWRLFEEMQRDNNFP-DVVSFNIMIDGSLKAGDIKSAESLLVGMSRA 593
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
GL PDL TY+ LI +G + +A+ ++++ SG EP+ +++ C D
Sbjct: 594 GLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKYCISQGETDKL 653
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQD 370
++ ++ ++ D + ++++ M S M+ + ++ D
Sbjct: 654 TELVKKLVDKDIVLDKELTCTVMDYMCNSSANMDLAKRLLRVTDD 698
>sp|Q9LSL9|PP445_ARATH Pentatricopeptide repeat-containing protein At5g65560
OS=Arabidopsis thaliana GN=At5g65560 PE=2 SV=1
Length = 915
Score = 176 bits (445), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 151/622 (24%), Positives = 281/622 (45%), Gaps = 74/622 (11%)
Query: 157 YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRR 216
Y S+L L+ +G+ I ++++C D+ D V L C ++ D R
Sbjct: 126 YASLLTLLINNGYVGVVFKIRLLMIKSC-DSVGDALYVLDL-----CRKM-----NKDER 174
Query: 217 SEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNS 276
E K ++ I YN +++ +G + +++ EM E + P+++TYN
Sbjct: 175 FELK-----------YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNK 223
Query: 277 LIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNG 336
++ C +G V++A ++ +G +P+ FT+ +I G C+ +D A K+F+EM G
Sbjct: 224 MVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKG 283
Query: 337 LIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAY 396
+ V Y L++G+ +R++ EA LF KM D + T+ +LI L + R A
Sbjct: 284 CRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEAL 343
Query: 397 TLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGF 456
L ++++ G + T+++++ LC + + E+A L+ +M +G + +++T ++L+ G+
Sbjct: 344 NLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGY 403
Query: 457 HKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIM 516
K G + +++ + L + + ++ KS K + L +++
Sbjct: 404 CKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMGVLNKMLERKVLPDVV 463
Query: 517 SLIGSTNLETDANLGSGEGDAKDEGSQLTN-----SDEWSSSPYMDKLADQVKSDCHSSQ 571
+ N D SG D+ L N D+W+ ++S
Sbjct: 464 TY----NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWT----------------YTSM 503
Query: 572 LFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNS 631
+ SL + RV+ AC LF+ GV+P Y +
Sbjct: 504 IDSLCKSKRVEE--------------------------ACDLFDSLEQKGVNPNVVMYTA 537
Query: 632 MMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQG 691
++ + K G ++A +L +M K C + T+N +I GL G+ A T+L++ M +
Sbjct: 538 LIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEA-TLLEEKMVKI 596
Query: 692 GGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEA 751
G V LI+ L K G FD A F+QM +SG PD T+ T I+ + GRL +A
Sbjct: 597 GLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDA 656
Query: 752 HYFLKMMLDSGCTPNHVTDTTL 773
+ M ++G +P+ T ++L
Sbjct: 657 EDMMAKMRENGVSPDLFTYSSL 678
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 169/708 (23%), Positives = 298/708 (42%), Gaps = 79/708 (11%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
YK Y+ + ++ R G ++E+ + M ED V + T+ ++ K G ++ A
Sbjct: 179 YKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEAN 238
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL-LEACNDNTADNSVVESLP 198
+ + + E G Y S+++ ++K L A + ++ L+ C N
Sbjct: 239 QYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNE---------- 288
Query: 199 GCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRL 258
VA L+ L + R E +F ++K+ + F + Y + I + +L L
Sbjct: 289 --VAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP-TVRTYTVLIKSLCGSERKSEALNL 345
Query: 259 FKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCK 318
KEM+E G+ P++HTY LI LC K + A + ++ G PN T+ +I G CK
Sbjct: 346 VKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCK 405
Query: 319 SYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWT 378
++DA+ + M+ L P+T YN L+ G KS V +A + KM++ V T
Sbjct: 406 RGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVT 464
Query: 379 HNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEME 438
+N LIDG R+G ++AY L + +G D T++ ++ LC+ ++EEA L + +E
Sbjct: 465 YNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLE 524
Query: 439 GRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSK 498
+G ++V ++L+ G+ K G+ D +++ + N + + L + A + K K
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK 584
Query: 499 RKDYTPMFPYKGDLSEIMSLIG-STNLETDANLGSGEGDAKDEGSQLTNSD-EWSSSPYM 556
L E M IG + TD L L + D + + S +
Sbjct: 585 EATL---------LEEKMVKIGLQPTVSTDTILIH---------RLLKDGDFDHAYSRFQ 626
Query: 557 DKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEI 616
L+ K D H+ TF+ + +G+L A +
Sbjct: 627 QMLSSGTKPDAHT------------------------YTTFIQTYCREGRLLDAEDMMAK 662
Query: 617 FTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQ------- 669
+ GV P +TY+S++ + G N A+ VL M + C T+ +I+
Sbjct: 663 MRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKY 722
Query: 670 -----------GLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANM 718
+ M D +L+K+++ + Y LI + + G A
Sbjct: 723 GKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVT-PNAKSYEKLILGICEVGNLRVAEK 781
Query: 719 LFEQM-RTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTP 765
+F+ M R GI+P + FN L+ K + EA + M+ G P
Sbjct: 782 VFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLP 829
Score = 159 bits (402), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 150/644 (23%), Positives = 279/644 (43%), Gaps = 50/644 (7%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
Y+H+ +C A ++E L M++D+ T+ +L++ S + A+ ++ M
Sbjct: 290 AYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEM 349
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEA----------------CNDNTA 189
EE G + + Y ++ SL + + A +L ++LE C
Sbjct: 350 EETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMI 409
Query: 190 DNSV--VESL------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNI 241
+++V VE + P NEL+ KS+ V ++ E+K D+ YN
Sbjct: 410 EDAVDVVELMESRKLSPNTRTYNELIKGYCKSNVHKAMG-VLNKMLERKVLP-DVVTYNS 467
Query: 242 CIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSG 301
I G+ ++ RL M ++GLVPD TY S+I LC +V++A +++ L+ G
Sbjct: 468 LIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKG 527
Query: 302 HEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEAC 361
PN + +I G CK+ ++D+A + +M +P+++ +N+L++G+ K+ EA
Sbjct: 528 VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEAT 587
Query: 362 QLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQL 421
L EKMV+ G++ + T ILI L ++G + AY+ F + G D T++ +
Sbjct: 588 LLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTY 647
Query: 422 CREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDV 481
CREG++ +A ++ +M G DL T SSL+ G+ G+ +F ++K +RD
Sbjct: 648 CREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQ 707
Query: 482 LKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEG 541
+ + ++ ++ + K+K P E+ ++ +T L
Sbjct: 708 HTFLSLIKHLLEMKYGKQKGSEP---------ELCAMSNMMEFDTVVEL----------- 747
Query: 542 SQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMV-NTFLSI 600
L E S +P + C L + + G ++V N LS
Sbjct: 748 --LEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSC 805
Query: 601 FLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTD 660
K N A K+ + +G P + ++ KKG + V + + D
Sbjct: 806 CCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYED 865
Query: 661 IATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLI 704
+ ++I G+GK G + + + +M++ G Y+ LI
Sbjct: 866 ELAWKIIIDGVGKQGLVEAFYELFN-VMEKNGCKFSSQTYSLLI 908
Score = 158 bits (399), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 172/752 (22%), Positives = 314/752 (41%), Gaps = 87/752 (11%)
Query: 61 LDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSL-LNSMQEDDVVVDS 119
LD L+F W S P YKH+ +Y+ + + G++ V + L ++ D V D+
Sbjct: 101 LDPKTALNFSHWISQ-NPRYKHSVYSYASLLTLLINNGYVGVVFKIRLLMIKSCDSVGDA 159
Query: 120 -------------ETFKL-----------LLEPCIKSGKIDFAIEILDYMEELGTSLSPN 155
E F+L LL + G +D ++ YME L + PN
Sbjct: 160 LYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQV--YMEMLEDKVCPN 217
Query: 156 V--YDSVLVSLVRKKQLGLAMSILFKLLEA----------------CNDNTADNS--VVE 195
+ Y+ ++ + + A + K++EA C D++ V
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277
Query: 196 SLP--GC----VACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCW 249
+P GC VA L+ L + R E +F ++K+ + F + Y + I +
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFP-TVRTYTVLIKSLCGS 336
Query: 250 GDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTH 309
+L L KEM+E G+ P++HTY LI LC K + A + ++ G PN T+
Sbjct: 337 ERKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITY 396
Query: 310 RIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQ 369
+I G CK ++DA+ + M+ L P+T YN L+ G KS V +A + KM++
Sbjct: 397 NALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLE 455
Query: 370 DGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEE 429
V T+N LIDG R+G ++AY L + +G D T++ ++ LC+ ++EE
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515
Query: 430 ALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVE 489
A L + +E +G ++V ++L+ G+ K G+ D +++ + N + + L + A +
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575
Query: 490 ATMKSRKSKRKDYTPMFPYKGDLSEIMSLIG-STNLETDANLGS---GEGDAKDEGSQLT 545
K K L E M IG + TD L +GD S+
Sbjct: 576 GLCADGKLKEATL---------LEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQ 626
Query: 546 NSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKG 605
+ P +++ C +L + + + D+ ++ + + G
Sbjct: 627 QMLSSGTKPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLG 686
Query: 606 KLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGY------------------FNQAWG 647
+ N A + + D G P +T+ S++ ++ Y F+
Sbjct: 687 QTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVE 746
Query: 648 VLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVL 707
+L +M E + +Y +I G+ ++G +A + D + + G +++N L++
Sbjct: 747 LLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCC 806
Query: 708 GKAGRFDEANMLFEQMRTSGINPDVVTFNTLI 739
K + +EA + + M G P + + LI
Sbjct: 807 CKLKKHNEAAKVVDDMICVGHLPQLESCKVLI 838
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 102/451 (22%), Positives = 193/451 (42%), Gaps = 85/451 (18%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + CR+G + LL+ M + +V D T+ +++ KS +++ A ++ D +
Sbjct: 464 TYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSL 523
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLL-EACNDNT-----------ADN 191
E+ G ++PNV Y +++ + ++ A +L K+L + C N+ AD
Sbjct: 524 EQKG--VNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADG 581
Query: 192 SVVES-----------LPGCVACNELLVALRKSDRRSEFKQVFERLKE--QKEFEFDIYG 238
+ E+ L V+ + +L+ D +F + R ++ + D +
Sbjct: 582 KLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKD--GDFDHAYSRFQQMLSSGTKPDAHT 639
Query: 239 YNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELK 298
Y I + G L + + +M+E G+ PDL TY+SLI+ +G+ A V + ++
Sbjct: 640 YTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMR 699
Query: 299 GSGHEPNEFT--------------------------------------------HRI--- 311
+G EP++ T H +
Sbjct: 700 DTGCEPSQHTFLSLIKHLLEMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPN 759
Query: 312 ------IIQGCCKSYRMDDAMKIFSEMQYN-GLIPDTVVYNSLLNGMFKSRKVMEACQLF 364
+I G C+ + A K+F MQ N G+ P +V+N+LL+ K +K EA ++
Sbjct: 760 AKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVV 819
Query: 365 EKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCRE 424
+ M+ G + +LI GL++ G E ++F +L + G + D + + I++ + ++
Sbjct: 820 DDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQ 879
Query: 425 GQIEEALRLVEEMEGRGFVVDLVTISSLLIG 455
G +E L ME G T S L+ G
Sbjct: 880 GLVEAFYELFNVMEKNGCKFSSQTYSLLIEG 910
Score = 69.7 bits (169), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 133/311 (42%), Gaps = 40/311 (12%)
Query: 81 KHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIE 140
K A TY+ +T CR G L + ++ M+E+ V D T+ L++ G+ +FA +
Sbjct: 634 KPDAHTYTTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFD 693
Query: 141 ILDYMEELGTSLSPNVYDSVLVSLVRK---KQLGLAMSILFKLLEACNDNTADNSVVESL 197
+L M + G S + + S++ L+ KQ G S
Sbjct: 694 VLKRMRDTGCEPSQHTFLSLIKHLLEMKYGKQKG------------------------SE 729
Query: 198 PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEF--DIYGYNICIHAFGCWGDLHTS 255
P A + ++ EF V E L++ E + Y I G+L +
Sbjct: 730 PELCAMSNMM----------EFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVA 779
Query: 256 LRLFKEM-KEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQ 314
++F M + +G+ P +N+L+ C + K +A V +++ GH P + +++I
Sbjct: 780 EKVFDHMQRNEGISPSELVFNALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLIC 839
Query: 315 GCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRT 374
G K + +F + G D + + +++G+ K V +LF M ++G +
Sbjct: 840 GLYKKGEKERGTSVFQNLLQCGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKF 899
Query: 375 SCWTHNILIDG 385
S T+++LI+G
Sbjct: 900 SSQTYSLLIEG 910
>sp|Q9SS81|PP221_ARATH Pentatricopeptide repeat-containing protein At3g09060
OS=Arabidopsis thaliana GN=At3g09060 PE=2 SV=1
Length = 687
Score = 175 bits (443), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 148/567 (26%), Positives = 261/567 (46%), Gaps = 36/567 (6%)
Query: 222 VFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVL 281
VF+R++E E I YN ++AF LF + G+ P+L TYN LI++
Sbjct: 100 VFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVAPNLQTYNVLIKMS 159
Query: 282 CVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDT 341
C + + A + + G +P+ F++ +I K+ ++DDA+++F EM G+ PD
Sbjct: 160 CKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAGKLDDALELFDEMSERGVAPDV 219
Query: 342 VVYNSLLNGMFKSRKVMEACQLFEKMVQD-GVRTSCWTHNILIDGLFRNGRAEAAYTLFC 400
YN L++G K + A +L++++++D V + THNI+I GL + GR + ++
Sbjct: 220 TCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTHNIMISGLSKCGRVDDCLKIWE 279
Query: 401 DLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYG 460
+K+ + D T+S ++ LC G +++A + E++ R +D+VT +++L GF + G
Sbjct: 280 RMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCG 339
Query: 461 R-------WDFTERLMKHIRDGNLV-LDVL------KWKADVEATMKSRKSKRKDYTPMF 506
+ W R+M+H N+V ++L K D EATM R K Y
Sbjct: 340 KIKESLELW----RIMEHKNSVNIVSYNILIKGLLENGKID-EATMIWRLMPAKGYAADK 394
Query: 507 PYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSD 566
G + + G N LG + + + G L D ++ + +D L
Sbjct: 395 TTYGIFIHGLCVNGYVN----KALGVMQ-EVESSGGHL---DVYAYASIIDCL------- 439
Query: 567 CHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVN 626
C +L + ++ K + + N + + +L A G P
Sbjct: 440 CKKKRLEEASNLVKEMSKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTV 499
Query: 627 YTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDK 686
+YN ++ K G F +A + EM E D+ TY++++ GL + + DLA + +
Sbjct: 500 VSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQ 559
Query: 687 LMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAG 746
+ Q G DV+M+N LI+ L G+ D+A + M ++VT+NTL+E K G
Sbjct: 560 FL-QSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVG 618
Query: 747 RLKEAHYFLKMMLDSGCTPNHVTDTTL 773
A M G P+ ++ T+
Sbjct: 619 DSNRATVIWGYMYKMGLQPDIISYNTI 645
Score = 166 bits (420), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 154/674 (22%), Positives = 295/674 (43%), Gaps = 33/674 (4%)
Query: 74 SSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSG 133
++ P Y H+A Y HI R + + V ++ ++ + D + +++ K+
Sbjct: 33 ATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIKTYGKNS 92
Query: 134 KIDFAIEILDYMEEL-GTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNS 192
D A+++ M E+ G + Y+++L + V KQ + + LF E
Sbjct: 93 MPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQW-VKVESLFAYFETAG------- 144
Query: 193 VVESLPGCVACNELLVALRKSDRRSEFKQV--FERLKEQKEFEFDIYGYNICIHAFGCWG 250
P N V ++ S ++ EF++ F ++ F+ D++ Y+ I+ G
Sbjct: 145 ---VAPNLQTYN---VLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTVINDLAKAG 198
Query: 251 DLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEE-LKGSGHEPNEFTH 309
L +L LF EM E+G+ PD+ YN LI K A+ +W+ L+ S PN TH
Sbjct: 199 KLDDALELFDEMSERGVAPDVTCYNILIDGFLKEKDHKTAMELWDRLLEDSSVYPNVKTH 258
Query: 310 RIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQ 369
I+I G K R+DD +KI+ M+ N D Y+SL++G+ + V +A +F ++ +
Sbjct: 259 NIMISGLSKCGRVDDCLKIWERMKQNEREKDLYTYSSLIHGLCDAGNVDKAESVFNELDE 318
Query: 370 DGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEE 429
T+N ++ G R G+ + + L+ ++ K V+ ++++I++ L G+I+E
Sbjct: 319 RKASIDVVTYNTMLGGFCRCGKIKESLELWRIMEHKNS-VNIVSYNILIKGLLENGKIDE 377
Query: 430 ALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVE 489
A + M +G+ D T + G G + +M+ + LDV + + ++
Sbjct: 378 ATMIWRLMPAKGYAADKTTYGIFIHGLCVNGYVNKALGVMQEVESSGGHLDVYAYASIID 437
Query: 490 ATMKSRKSKRKD--YTPMFPYKGDLSEIM--SLIGSTNLETDANLGSGEGDAKDEGSQLT 545
K ++ + M + +L+ + +LIG L D+ LG ++ G
Sbjct: 438 CLCKKKRLEEASNLVKEMSKHGVELNSHVCNALIGG--LIRDSRLGEASFFLREMGKN-- 493
Query: 546 NSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKG 605
P + + C + + + ++ + D+ + L
Sbjct: 494 -----GCRPTVVSYNILICGLCKAGKFGEASAFVKEMLENGWKPDLKTYSILLCGLCRDR 548
Query: 606 KLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYN 665
K++LA +L+ F G+ +N ++ G + A V+ M + C ++ TYN
Sbjct: 549 KIDLALELWHQFLQSGLETDVMMHNILIHGLCSVGKLDDAMTVMANMEHRNCTANLVTYN 608
Query: 666 VVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRT 725
+++G K+G ++ A+ I + K G D++ YNT++ L A F+ R
Sbjct: 609 TLMEGFFKVGDSNRATVIWGYMYKM-GLQPDIISYNTIMKGLCMCRGVSYAMEFFDDARN 667
Query: 726 SGINPDVVTFNTLI 739
GI P V T+N L+
Sbjct: 668 HGIFPTVYTWNILV 681
Score = 109 bits (272), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 94/410 (22%), Positives = 179/410 (43%), Gaps = 19/410 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TYS + +C AG +++ S+ N + E +D T+ +L + GKI ++E+ M
Sbjct: 292 TYSSLIHGLCDAGNVDKAESVFNELDERKASIDVVTYNTMLGGFCRCGKIKESLELWRIM 351
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEA---CNDNTADNSVVESLPGCVA 202
E S++ Y+ ++ L+ ++ A +++++L+ A D T + L
Sbjct: 352 EH-KNSVNIVSYNILIKGLLENGKIDEA-TMIWRLMPAKGYAADKTTYGIFIHGLCVNGY 409
Query: 203 CNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEM 262
N+ L +++ E D+Y Y I L + L KEM
Sbjct: 410 VNKALGVMQEV--------------ESSGGHLDVYAYASIIDCLCKKKRLEEASNLVKEM 455
Query: 263 KEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRM 322
+ G+ + H N+LI L ++ +A E+ +G P ++ I+I G CK+ +
Sbjct: 456 SKHGVELNSHVCNALIGGLIRDSRLGEASFFLREMGKNGCRPTVVSYNILICGLCKAGKF 515
Query: 323 DDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNIL 382
+A EM NG PD Y+ LL G+ + RK+ A +L+ + +Q G+ T HNIL
Sbjct: 516 GEASAFVKEMLENGWKPDLKTYSILLCGLCRDRKIDLALELWHQFLQSGLETDVMMHNIL 575
Query: 383 IDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGF 442
I GL G+ + A T+ +++ + + +T++ ++ + G A + M G
Sbjct: 576 IHGLCSVGKLDDAMTVMANMEHRNCTANLVTYNTLMEGFFKVGDSNRATVIWGYMYKMGL 635
Query: 443 VVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATM 492
D+++ ++++ G + R+ + V W V A +
Sbjct: 636 QPDIISYNTIMKGLCMCRGVSYAMEFFDDARNHGIFPTVYTWNILVRAVV 685
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 72/164 (43%), Gaps = 4/164 (2%)
Query: 614 FEIFTDMGVHP----VNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQ 669
F +F HP Y+ ++ + N ++ + + C D VI+
Sbjct: 27 FALFDSATRHPGYAHSAVVYHHILRRLSETRMVNHVSRIVELIRSQECKCDEDVALSVIK 86
Query: 670 GLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGIN 729
GK D A + ++ + G + YNTL+N +A ++ + LF T+G+
Sbjct: 87 TYGKNSMPDQALDVFKRMREIFGCEPAIRSYNTLLNAFVEAKQWVKVESLFAYFETAGVA 146
Query: 730 PDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
P++ T+N LI+++ K ++A FL M G P+ + +T+
Sbjct: 147 PNLQTYNVLIKMSCKKKEFEKARGFLDWMWKEGFKPDVFSYSTV 190
>sp|Q9LQ16|PPR94_ARATH Pentatricopeptide repeat-containing protein At1g62910
OS=Arabidopsis thaliana GN=At1g62910 PE=2 SV=1
Length = 632
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 137/534 (25%), Positives = 246/534 (46%), Gaps = 20/534 (3%)
Query: 236 IYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWE 295
I +N + A + L ++M+ G+ DL+TY+ I C ++ AL V
Sbjct: 83 IVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLA 142
Query: 296 ELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSR 355
++ G+EP+ T ++ G C S R+ DA+ + +M G PDT + +L++G+F
Sbjct: 143 KMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHN 202
Query: 356 KVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFS 415
K EA L ++MVQ G + T+ +++GL + G + A +L ++K D + ++
Sbjct: 203 KASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYN 262
Query: 416 IVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDG 475
++ LC+ +++AL L EM+ +G D+ T SSL+ YGRW RL+ + +
Sbjct: 263 TIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 476 NLVLDVLKWKADVEATMKSRK--SKRKDYTPMF--PYKGDLSEIMSLIGSTNLETDANLG 531
+ +V+ + A ++A +K K K Y M D+ SLI + +
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLD-- 380
Query: 532 SGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQL---FSLARGLRVQGKGMGT 588
+AK + + D + P + + +K C + ++ L R + +G T
Sbjct: 381 ----EAKHMFELMISKDCF---PNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433
Query: 589 FDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGV 648
T + F + A +F+ +GVHP TYN ++ K G +A V
Sbjct: 434 V---TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVV 490
Query: 649 LNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLG 708
+ DI TYN++I+G+ K G+ + + L +G +V+ YNT+I+
Sbjct: 491 FEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSP-NVIAYNTMISGFC 549
Query: 709 KAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSG 762
+ G +EA+ L ++M+ G P+ T+NTLI + G + + +K M G
Sbjct: 550 RKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCG 603
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 109/425 (25%), Positives = 213/425 (50%), Gaps = 30/425 (7%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y+ T S + C + + + +L++ M E D+ TF L+ K A+
Sbjct: 149 YEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAV 208
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL----LEACNDNTADNSVVE 195
++D M + G Y +V+ L ++ + LA+S+L K+ +EA D N++++
Sbjct: 209 ALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEA--DVVIYNTIID 266
Query: 196 SL----------------------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFE 233
L P + L+ L R S+ ++ + E+K
Sbjct: 267 GLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERK-IN 325
Query: 234 FDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIV 293
++ ++ I AF G L + +L+ EM ++ + PD+ TY+SLI C+ ++ +A +
Sbjct: 326 PNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 385
Query: 294 WEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFK 353
+E + PN T+ +I+G CK+ R+++ M++F EM GL+ +TV Y +L++G F+
Sbjct: 386 FELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQ 445
Query: 354 SRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGIT 413
+R A +F++MV GV + T+NIL+DGL +NG+ A +F L++ D T
Sbjct: 446 ARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYT 505
Query: 414 FSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIR 473
++I++ +C+ G++E+ L + +G +++ ++++ GF + G + + L+K ++
Sbjct: 506 YNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMK 565
Query: 474 -DGNL 477
DG L
Sbjct: 566 EDGPL 570
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 151/575 (26%), Positives = 258/575 (44%), Gaps = 36/575 (6%)
Query: 197 LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKE---FEFDIYGYNICIHAFGCWGDLH 253
P V N+LL A+ K ++ F+ V L EQ + D+Y Y+I I+ F L
Sbjct: 80 FPSIVEFNKLLSAVAKMNK---FELVIS-LGEQMQTLGISHDLYTYSIFINCFCRRSQLS 135
Query: 254 TSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIII 313
+L + +M + G PD+ T +SL+ C ++ DA+ + +++ G++P+ FT +I
Sbjct: 136 LALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLI 195
Query: 314 QGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVR 373
G + +A+ + +M G PD V Y +++NG+ K + A L +KM + +
Sbjct: 196 HGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIE 255
Query: 374 TSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRL 433
+N +IDGL + + A LF ++ KG D T+S ++ LC G+ +A RL
Sbjct: 256 ADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRL 315
Query: 434 VEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEA-TM 492
+ +M R ++VT S+L+ F K G+ E+L + ++ D+ + + + M
Sbjct: 316 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 375
Query: 493 KSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAK--DEGSQLTNSDEW 550
R + K MF ++S N+ T + L G AK +EG +L
Sbjct: 376 HDRLDEAKH---MFEL------MISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQ 426
Query: 551 -----SSSPYMDKLADQVKS-DCHSSQL-FSLARGLRVQGKGMGTFDIDMVNTFLSIFLA 603
++ Y + ++ DC ++Q+ F + V +I N L
Sbjct: 427 RGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHP------NILTYNILLDGLCK 480
Query: 604 KGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIAT 663
GKL A +FE + P YTYN M+ K G W + + K ++
Sbjct: 481 NGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIA 540
Query: 664 YNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQM 723
YN +I G + G + A ++L K MK+ G + YNTLI + G + + L ++M
Sbjct: 541 YNTMISGFCRKGSKEEADSLLKK-MKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEM 599
Query: 724 RTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMM 758
R+ G D T L+ GRL ++ FL M+
Sbjct: 600 RSCGFAGDASTIG-LVTNMLHDGRLDKS--FLDML 631
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 143/598 (23%), Positives = 260/598 (43%), Gaps = 60/598 (10%)
Query: 122 FKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL 181
F LL K K + I + + M+ LG S Y + R+ QL LA+++L K++
Sbjct: 86 FNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMM 145
Query: 182 EACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNI 241
+ + P V + LL S R S+
Sbjct: 146 KLGYE-----------PDIVTLSSLLNGYCHSKRISD----------------------- 171
Query: 242 CIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSG 301
++ L +M E G PD T+ +LI L + K +A+ + +++ G
Sbjct: 172 -------------AVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRG 218
Query: 302 HEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEAC 361
+P+ T+ ++ G CK +D A+ + +M+ + D V+YN++++G+ K + + +A
Sbjct: 219 CQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDAL 278
Query: 362 QLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQL 421
LF +M G+R +T++ LI L GR A L D+ ++ + +TFS ++
Sbjct: 279 NLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAF 338
Query: 422 CREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDV 481
+EG++ EA +L +EM R D+ T SSL+ GF + R D + + + + + +V
Sbjct: 339 VKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNV 398
Query: 482 LKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKD-E 540
+ + ++ K+++ + +F ++S+ L+G+T T L G A+D +
Sbjct: 399 VTYSTLIKGFCKAKRVEEG--MELFR---EMSQ-RGLVGNT--VTYTTLIHGFFQARDCD 450
Query: 541 GSQLTNSDEWSSSPYMDKLADQVKSD--CHSSQLFSLARGLRVQGKGMGTFDIDMVNTFL 598
+Q+ S + + L + D C + +L + DI N +
Sbjct: 451 NAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMI 510
Query: 599 SIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCP 658
GK+ +LF + GV P YN+M+S F +KG +A +L +M E
Sbjct: 511 EGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPL 570
Query: 659 TDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEA 716
+ TYN +I+ + G + AS L K M+ G D + N+L GR D++
Sbjct: 571 PNSGTYNTLIRARLRDGDRE-ASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDKS 626
Score = 133 bits (334), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 93/348 (26%), Positives = 174/348 (50%), Gaps = 17/348 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TYS + +C G + LL+ M E + + TF L++ +K GK+ A ++ D
Sbjct: 295 TYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYD-- 352
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
E + S+ P++ Y S++ +L A +F+L+ + + P V
Sbjct: 353 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH-MFELMIS----------KDCFPNVVTY 401
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
+ L+ K+ R E ++F + Q+ + Y IH F D + +FK+M
Sbjct: 402 STLIKGFCKAKRVEEGMELFREM-SQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 460
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
G+ P++ TYN L+ LC GK+ A++V+E L+ S EP+ +T+ I+I+G CK+ +++
Sbjct: 461 SVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVE 520
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
D ++F + G+ P+ + YN++++G + EA L +KM +DG + T+N LI
Sbjct: 521 DGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLI 580
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEAL 431
R+G EA+ L +++ G D T +V + +G+++++
Sbjct: 581 RARLRDGDREASAELIKEMRSCGFAGDASTIGLVT-NMLHDGRLDKSF 627
Score = 108 bits (270), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 194/449 (43%), Gaps = 41/449 (9%)
Query: 321 RMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHN 380
++DDA+ +F +M + P V +N LL+ + K K L E+M G+ +T++
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 381 ILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGR 440
I I+ R + A + + K G D +T S ++ C +I +A+ LV++M
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182
Query: 441 GFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRK 500
G+ D T ++L+ G + + L+ + D++ + V K
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCK------- 235
Query: 501 DYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLA 560
+GD+ +SL+ +E G E D + + D +MD
Sbjct: 236 --------RGDIDLALSLL--KKMEK----GKIEADVVIYNTII---DGLCKYKHMDD-- 276
Query: 561 DQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDM 620
+ LF+ + KG+ D+ ++ +S G+ + A +L +
Sbjct: 277 --------ALNLFT-----EMDNKGIRP-DVFTYSSLISCLCNYGRWSDASRLLSDMIER 322
Query: 621 GVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLA 680
++P T+++++ +FVK+G +A + +EM ++ DI TY+ +I G R D A
Sbjct: 323 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEA 382
Query: 681 STILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIE 740
+ + LM + +VV Y+TLI KA R +E LF +M G+ + VT+ TLI
Sbjct: 383 KHMFE-LMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIH 441
Query: 741 VNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
+A A K M+ G PN +T
Sbjct: 442 GFFQARDCDNAQMVFKQMVSVGVHPNILT 470
Score = 102 bits (254), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 111/208 (53%), Gaps = 3/208 (1%)
Query: 567 CHSSQLFSLARGLRVQGKGMG-TFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPV 625
C SQL SLA + + +G DI +++ L+ + +++ A L + +MG P
Sbjct: 129 CRRSQL-SLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPD 187
Query: 626 NYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILD 685
+T+ +++ ++A ++++M ++ C D+ TY V+ GL K G DLA ++L
Sbjct: 188 TFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLK 247
Query: 686 KLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKA 745
K M++G DVV+YNT+I+ L K D+A LF +M GI PDV T+++LI
Sbjct: 248 K-MEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306
Query: 746 GRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
GR +A L M++ PN VT + L
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSAL 334
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/419 (26%), Positives = 178/419 (42%), Gaps = 43/419 (10%)
Query: 356 KVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFS 415
KV +A LF MV+ S N L+ + + + E +L ++ G D T+S
Sbjct: 63 KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122
Query: 416 IVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGF-HKYGRWDFTERLMKHIRD 474
I + CR Q+ AL ++ +M G+ D+VT+SSLL G+ H K I D
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHS-----------KRISD 171
Query: 475 GNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGE 534
++D + VE YK D +LI L A+
Sbjct: 172 AVALVDQM-----VE----------------MGYKPDTFTFTTLIHGLFLHNKASEAVAL 210
Query: 535 GDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMV 594
D Q+ + P + V C + L+ KG D+ +
Sbjct: 211 VD------QMV---QRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIY 261
Query: 595 NTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGE 654
NT + ++ A LF + G+ P +TY+S++S G ++ A +L++M E
Sbjct: 262 NTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIE 321
Query: 655 KFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFD 714
+ ++ T++ +I K G+ A + D+++K+ D+ Y++LIN R D
Sbjct: 322 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP-DIFTYSSLINGFCMHDRLD 380
Query: 715 EANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
EA +FE M + P+VVT++TLI+ KA R++E + M G N VT TTL
Sbjct: 381 EAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTL 439
>sp|Q9SXD1|PPR91_ARATH Pentatricopeptide repeat-containing protein At1g62670,
mitochondrial OS=Arabidopsis thaliana GN=At1g62670 PE=2
SV=2
Length = 630
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 138/516 (26%), Positives = 242/516 (46%), Gaps = 24/516 (4%)
Query: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQG 315
+ L ++M+ G+ + +TY+ LI C ++ AL V ++ G+EPN T ++ G
Sbjct: 101 ISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNG 160
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTS 375
C S R+ +A+ + +M G P+TV +N+L++G+F K EA L ++MV G +
Sbjct: 161 YCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPD 220
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGI-TFSIVVLQLCREGQIEEALRLV 434
T+ ++++GL + G + A+ L +++ GK G+ ++ ++ LC+ +++AL L
Sbjct: 221 LVTYGVVVNGLCKRGDTDLAFNLLNKMEQ-GKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279
Query: 435 EEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKS 494
+EME +G ++VT SSL+ YGRW RL+ + + + DV + A ++A +K
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339
Query: 495 RK--SKRKDYTPMFPYKGDLSEIM--SLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEW 550
K K Y M D S + SLI G D DE Q+ E+
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLIN----------GFCMHDRLDEAKQMF---EF 386
Query: 551 SSS----PYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGK 606
S P + +K C ++ R + + N + G
Sbjct: 387 MVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGD 446
Query: 607 LNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNV 666
++A ++F+ GV P TYN+++ K G +A V + I TYN+
Sbjct: 447 CDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNI 506
Query: 667 VIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTS 726
+I+G+ K G+ + + L +G DVV YNT+I+ + G +EA+ LF++M+
Sbjct: 507 MIEGMCKAGKVEDGWDLFCNLSLKGVK-PDVVAYNTMISGFCRKGSKEEADALFKEMKED 565
Query: 727 GINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSG 762
G P+ +NTLI + G + + +K M G
Sbjct: 566 GTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCG 601
Score = 155 bits (392), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 152/640 (23%), Positives = 268/640 (41%), Gaps = 97/640 (15%)
Query: 122 FKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL 181
F LL K K D I + + M+ LG + Y ++ R+ QL LA+++L K++
Sbjct: 84 FSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLGKMM 143
Query: 182 EACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNI 241
+ + P V + LL S R SE
Sbjct: 144 KLGYE-----------PNIVTLSSLLNGYCHSKRISE----------------------- 169
Query: 242 CIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSG 301
++ L +M G P+ T+N+LI L + K +A+ + + + G
Sbjct: 170 -------------AVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKG 216
Query: 302 HEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEAC 361
+P+ T+ +++ G CK D A + ++M+ L P ++YN++++G+ K + + +A
Sbjct: 217 CQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDAL 276
Query: 362 QLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQL 421
LF++M G+R + T++ LI L GR A L D+ ++ D TFS ++
Sbjct: 277 NLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAF 336
Query: 422 CREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDV 481
+EG++ EA +L +EM R +VT SSL+ GF + R D +++ + + + DV
Sbjct: 337 VKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDV 396
Query: 482 LKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGST---NLETDANLGSGEGDAK 538
+ + ++ K ++ + M ++ ++S+ L+G+T N+ +G+ D
Sbjct: 397 VTYNTLIKGFCKYKRVEEG----MEVFR-EMSQ-RGLVGNTVTYNILIQGLFQAGDCDMA 450
Query: 539 DEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFL 598
E + + ++D V + I NT L
Sbjct: 451 QE-------------IFKEMVSDGVPPN------------------------IMTYNTLL 473
Query: 599 SIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCP 658
GKL A +FE + P YTYN M+ K G W + + K
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533
Query: 659 TDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANM 718
D+ YN +I G + G + A + K MK+ G + YNTLI + G + +
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALF-KEMKEDGTLPNSGCYNTLIRARLRDGDREASAE 592
Query: 719 LFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMM 758
L ++MR+ G D T L+ GRL ++ FL M+
Sbjct: 593 LIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKS--FLDML 629
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 127/523 (24%), Positives = 234/523 (44%), Gaps = 43/523 (8%)
Query: 252 LHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRI 311
L ++ LF EM + P + ++ L+ + + K + + E+++ G N +T+ I
Sbjct: 62 LDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSI 121
Query: 312 IIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDG 371
+I C+ ++ A+ + +M G P+ V +SLLNG S+++ EA L ++M G
Sbjct: 122 LINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTG 181
Query: 372 VRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEAL 431
+ + T N LI GLF + +A A L + KG D +T+ +VV LC+ G + A
Sbjct: 182 YQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAF 241
Query: 432 RLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEAT 491
L+ +ME ++ ++++ G KY D L K + + +V+ + + +
Sbjct: 242 NLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCL 301
Query: 492 MKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWS 551
+ D S ++S + + D S DA + +L ++
Sbjct: 302 CN------------YGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAE--- 346
Query: 552 SSPYMDKLADQ-VKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLA 610
KL D+ VK S I ++ ++ F +L+ A
Sbjct: 347 ------KLYDEMVKRSIDPS--------------------IVTYSSLINGFCMHDRLDEA 380
Query: 611 CKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQG 670
++FE P TYN+++ F K + V EM ++ + TYN++IQG
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440
Query: 671 LGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINP 730
L + G D+A I K M G +++ YNTL++ L K G+ ++A ++FE ++ S + P
Sbjct: 441 LFQAGDCDMAQEIF-KEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 499
Query: 731 DVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ T+N +IE KAG++++ + G P+ V T+
Sbjct: 500 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTM 542
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 109/394 (27%), Positives = 203/394 (51%), Gaps = 21/394 (5%)
Query: 91 FRTVCRAGFLE----EVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
F T+ FL E +L++ M D T+ +++ K G D A +L+ ME
Sbjct: 189 FNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKME 248
Query: 147 ELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACN 204
+ L P V Y++++ L + K + A++ LFK +E P V +
Sbjct: 249 Q--GKLEPGVLIYNTIIDGLCKYKHMDDALN-LFKEMETKGIR----------PNVVTYS 295
Query: 205 ELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKE 264
L+ L R S+ ++ + E+K D++ ++ I AF G L + +L+ EM +
Sbjct: 296 SLISCLCNYGRWSDASRLLSDMIERK-INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVK 354
Query: 265 KGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDD 324
+ + P + TY+SLI C+ ++ +A ++E + P+ T+ +I+G CK R+++
Sbjct: 355 RSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEE 414
Query: 325 AMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILID 384
M++F EM GL+ +TV YN L+ G+F++ A ++F++MV DGV + T+N L+D
Sbjct: 415 GMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLD 474
Query: 385 GLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVV 444
GL +NG+ E A +F L++ T++I++ +C+ G++E+ L + +G
Sbjct: 475 GLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKP 534
Query: 445 DLVTISSLLIGFHKYGRWDFTERLMKHIR-DGNL 477
D+V ++++ GF + G + + L K ++ DG L
Sbjct: 535 DVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Score = 140 bits (353), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 101/390 (25%), Positives = 198/390 (50%), Gaps = 16/390 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY + +C+ G + +LLN M++ + + +++ K +D A+ + M
Sbjct: 223 TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 282
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
E G + PNV Y S++ L + A +L ++E + P
Sbjct: 283 ETKG--IRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER-----------KINPDVFTF 329
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
+ L+ A K + E +++++ + ++ + I Y+ I+ F L + ++F+ M
Sbjct: 330 SALIDAFVKEGKLVEAEKLYDEMV-KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMV 388
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
K PD+ TYN+LI+ C +V++ + V+ E+ G N T+ I+IQG ++ D
Sbjct: 389 SKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCD 448
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
A +IF EM +G+ P+ + YN+LL+G+ K+ K+ +A +FE + + + + +T+NI+I
Sbjct: 449 MAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 508
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFV 443
+G+ + G+ E + LFC+L KG D + ++ ++ CR+G EEA L +EM+ G +
Sbjct: 509 EGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTL 568
Query: 444 VDLVTISSLLIGFHKYGRWDFTERLMKHIR 473
+ ++L+ + G + + L+K +R
Sbjct: 569 PNSGCYNTLIRARLRDGDREASAELIKEMR 598
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 105/379 (27%), Positives = 178/379 (46%), Gaps = 17/379 (4%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
Y+ I +C+ +++ +L M+ + + T+ L+ G+ A +L M
Sbjct: 259 YNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMI 318
Query: 147 ELGTSLSPNVYD-SVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESL-PGCVACN 204
E ++P+V+ S L+ K+ KL+EA + D V S+ P V +
Sbjct: 319 E--RKINPDVFTFSALIDAFVKEG---------KLVEA--EKLYDEMVKRSIDPSIVTYS 365
Query: 205 ELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKE 264
L+ DR E KQ+FE + + F D+ YN I F + + + +F+EM +
Sbjct: 366 SLINGFCMHDRLDEAKQMFEFMVSKHCFP-DVVTYNTLIKGFCKYKRVEEGMEVFREMSQ 424
Query: 265 KGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDD 324
+GLV + TYN LIQ L G A +++E+ G PN T+ ++ G CK+ +++
Sbjct: 425 RGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEK 484
Query: 325 AMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILID 384
AM +F +Q + + P YN ++ GM K+ KV + LF + GV+ +N +I
Sbjct: 485 AMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMIS 544
Query: 385 GLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVV 444
G R G E A LF ++K+ G + ++ ++ R+G E + L++EM GF
Sbjct: 545 GFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAG 604
Query: 445 DLVTISSLLIGFHKYGRWD 463
D TI + H GR D
Sbjct: 605 DASTIGLVTNMLHD-GRLD 622
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 103/418 (24%), Positives = 190/418 (45%), Gaps = 18/418 (4%)
Query: 82 HTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEI 141
H TYS + CR L ++L M + + T LL S +I A+ +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173
Query: 142 LDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL-EACNDNTADNSVVESLPGC 200
+D M G + +++++ L + AM+++ +++ + C + VV
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVV------ 227
Query: 201 VACNELLVALRKSDRRSEFKQVFERLK--EQKEFEFDIYGYNICIHAFGCWGDLHTSLRL 258
N L +R + F L EQ + E + YN I + + +L L
Sbjct: 228 --VNGLC-------KRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNL 278
Query: 259 FKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCK 318
FKEM+ KG+ P++ TY+SLI LC G+ DA + ++ P+ FT +I K
Sbjct: 279 FKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVK 338
Query: 319 SYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWT 378
++ +A K++ EM + P V Y+SL+NG ++ EA Q+FE MV T
Sbjct: 339 EGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVT 398
Query: 379 HNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEME 438
+N LI G + R E +F ++ ++G + +T++I++ L + G + A + +EM
Sbjct: 399 YNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMV 458
Query: 439 GRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRK 496
G +++T ++LL G K G+ + + ++++ + + + +E K+ K
Sbjct: 459 SDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGK 516
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 80/168 (47%), Gaps = 1/168 (0%)
Query: 602 LAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDI 661
L++ KL+ A LF P ++ ++S+ K F+ + +M P +
Sbjct: 57 LSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNH 116
Query: 662 ATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFE 721
TY+++I + + LA +L K+MK G ++V ++L+N + R EA L +
Sbjct: 117 YTYSILINCFCRRSQLPLALAVLGKMMKLGYE-PNIVTLSSLLNGYCHSKRISEAVALVD 175
Query: 722 QMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
QM +G P+ VTFNTLI + EA + M+ GC P+ VT
Sbjct: 176 QMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVT 223
>sp|Q9FIX3|PP407_ARATH Pentatricopeptide repeat-containing protein At5g39710
OS=Arabidopsis thaliana GN=EMB2745 PE=2 SV=1
Length = 747
Score = 173 bits (439), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 134/535 (25%), Positives = 240/535 (44%), Gaps = 64/535 (11%)
Query: 258 LFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCC 317
+FKEM E + P++ TYN LI+ C G + AL ++++++ G PN T+ +I G C
Sbjct: 192 VFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYC 251
Query: 318 KSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCW 377
K ++DD K+ M GL P+ + YN ++NG+ + ++ E + +M + G
Sbjct: 252 KLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEV 311
Query: 378 THNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEM 437
T+N LI G + G A + ++ + G IT++ ++ +C+ G + A+ +++M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 438 EGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKS 497
RG + T ++L+ GF + G + R+++ + D V+ + A +
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALI--------- 422
Query: 498 KRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMD 557
N G +D + L + E SP +
Sbjct: 423 -------------------------------NGHCVTGKMEDAIAVLEDMKEKGLSPDVV 451
Query: 558 KLADQVKSDCHSSQLFSLARGLRVQ----GKGMGTFDIDMVNTFLSIFLAKGKLNLACKL 613
+ + C S + + LRV+ KG+ D ++ + F + + AC L
Sbjct: 452 SYSTVLSGFCRS---YDVDEALRVKREMVEKGIKP-DTITYSSLIQGFCEQRRTKEACDL 507
Query: 614 FEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGK 673
+E +G+ P +TY ++++++ +G +A + NEM EK D+ TY+V+I GL K
Sbjct: 508 YEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNK 567
Query: 674 MGRADLASTILDKLMKQGGGYLDVVMYNTLI----NVLGKA-----------GRFDEANM 718
R A +L KL + DV Y+TLI N+ K+ G EA+
Sbjct: 568 QSRTREAKRLLLKLFYEESVPSDVT-YHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626
Query: 719 LFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+FE M PD +N +I + +AG +++A+ K M+ SG + VT L
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIAL 681
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 116/438 (26%), Positives = 198/438 (45%), Gaps = 49/438 (11%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + + C+ G + + M + T+ L+ K+G ++ A+E LD M
Sbjct: 312 TYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQM 371
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
G + Y +++ +K + A +++L NDN P V N
Sbjct: 372 RVRGLCPNERTYTTLVDGFSQKGYMNEA----YRVLREMNDNGFS-------PSVVTYNA 420
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
L+ + + + V E +KE K D+ Y+ + F D+ +LR+ +EM EK
Sbjct: 421 LINGHCVTGKMEDAIAVLEDMKE-KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
G+ PD TY+SLIQ C + K+A ++EE+ G P+EFT+ +I C ++ A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMV-QDGVRTSCWTHNI--- 381
+++ +EM G++PD V Y+ L+NG+ K + EA +L K+ ++ V + H +
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIEN 599
Query: 382 -----------LIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEA 430
LI G G A +F + K DG ++I++ CR G I +A
Sbjct: 600 CSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKA 659
Query: 431 LRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHI------------------ 472
L +EM GF++ VT+ +L+ HK G+ + ++ H+
Sbjct: 660 YTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEI 719
Query: 473 --RDGNL--VLDVLKWKA 486
R+GN+ VLDVL A
Sbjct: 720 NHREGNMDVVLDVLAEMA 737
Score = 140 bits (352), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 146/624 (23%), Positives = 263/624 (42%), Gaps = 93/624 (14%)
Query: 197 LPGCVACNELLVALRKSDRRSEFKQ-VFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTS 255
+PG ++ N +L A +S R F + VF+ + E + +++ YNI I F G++ +
Sbjct: 166 MPGVLSYNAVLDATIRSKRNISFAENVFKEMLES-QVSPNVFTYNILIRGFCFAGNIDVA 224
Query: 256 LRLFKEMKEKG-----------------------------------LVPDLHTYNSLIQV 280
L LF +M+ KG L P+L +YN +I
Sbjct: 225 LTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVING 284
Query: 281 LCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPD 340
LC G++K+ V E+ G+ +E T+ +I+G CK A+ + +EM +GL P
Sbjct: 285 LCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPS 344
Query: 341 TVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFC 400
+ Y SL++ M K+ + A + ++M G+ + T+ L+DG + G AY +
Sbjct: 345 VITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLR 404
Query: 401 DLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYG 460
++ G +T++ ++ C G++E+A+ ++E+M+ +G D+V+ S++L GF +
Sbjct: 405 EMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSY 464
Query: 461 RWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIG 520
D R+ + + + + D + + + ++ + R++K DL E M +G
Sbjct: 465 DVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE---------ACDLYEEMLRVG 515
Query: 521 STNLETD----ANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLA 576
E N EGD ++ QL N + + V D + + L
Sbjct: 516 LPPDEFTYTALINAYCMEGDL-EKALQLHN----------EMVEKGVLPDVVTYSV--LI 562
Query: 577 RGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLF---EIFTDMGVHPV-----NYT 628
GL Q + + L KLF + +D+ H + N
Sbjct: 563 NGLNKQSR------------------TREAKRLLLKLFYEESVPSDVTYHTLIENCSNIE 604
Query: 629 YNSMMS---SFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILD 685
+ S++S F KG +A V M K D YN++I G + G A T+
Sbjct: 605 FKSVVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYK 664
Query: 686 KLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKA 745
+++K G L V L+ L K G+ +E N + + S + L+E+N +
Sbjct: 665 EMVK-SGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHRE 723
Query: 746 GRLKEAHYFLKMMLDSGCTPNHVT 769
G + L M G PN ++
Sbjct: 724 GNMDVVLDVLAEMAKDGFLPNGIS 747
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 99/375 (26%), Positives = 188/375 (50%), Gaps = 29/375 (7%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + R C AG ++ +L + M+ + + T+ L++ K KID ++L M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSIL-------FKLLEA---------CNDN 187
G L PN+ Y+ V+ L R+ ++ +L + L E C +
Sbjct: 267 ALKG--LEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG 324
Query: 188 TADNSVV---ESL-----PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGY 239
++V E L P + L+ ++ K+ + + ++++ + + Y
Sbjct: 325 NFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNE-RTY 383
Query: 240 NICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKG 299
+ F G ++ + R+ +EM + G P + TYN+LI CV GK++DA+ V E++K
Sbjct: 384 TTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKE 443
Query: 300 SGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVME 359
G P+ ++ ++ G C+SY +D+A+++ EM G+ PDT+ Y+SL+ G + R+ E
Sbjct: 444 KGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKE 503
Query: 360 ACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVL 419
AC L+E+M++ G+ +T+ LI+ G E A L ++ +KG D +T+S+++
Sbjct: 504 ACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLIN 563
Query: 420 QLCREGQIEEALRLV 434
L ++ + EA RL+
Sbjct: 564 GLNKQSRTREAKRLL 578
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 121/491 (24%), Positives = 216/491 (43%), Gaps = 48/491 (9%)
Query: 287 VKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYR-MDDAMKIFSEMQYNGLIPDTVVYN 345
+ AL + + G P ++ ++ +S R + A +F EM + + P+ YN
Sbjct: 150 IDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLESQVSPNVFTYN 209
Query: 346 SLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKK 405
L+ G + + A LF+KM G + T+N LIDG + + + + L + K
Sbjct: 210 ILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSMALK 269
Query: 406 GKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFT 465
G + I++++V+ LCREG+++E ++ EM RG+ +D VT ++L+ G+ K G +F
Sbjct: 270 GLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEG--NFH 327
Query: 466 ERLMKH---IRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGST 522
+ L+ H +R G L V+ + + + + K+ G+++ M +
Sbjct: 328 QALVMHAEMLRHG-LTPSVITYTSLIHSMCKA---------------GNMNRAMEFLDQM 371
Query: 523 NLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQ 582
+ G +E + T D +S YM++ R LR
Sbjct: 372 RVR---------GLCPNERTYTTLVDGFSQKGYMNEAY----------------RVLREM 406
Query: 583 GKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYF 642
+ + N ++ GK+ A + E + G+ P +Y++++S F +
Sbjct: 407 NDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDV 466
Query: 643 NQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNT 702
++A V EM EK D TY+ +IQG + R A + +++++ G D Y
Sbjct: 467 DEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLP-PDEFTYTA 525
Query: 703 LINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSG 762
LIN G ++A L +M G+ PDVVT++ LI K R +EA L +
Sbjct: 526 LINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEE 585
Query: 763 CTPNHVTDTTL 773
P+ VT TL
Sbjct: 586 SVPSDVTYHTL 596
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 103/402 (25%), Positives = 181/402 (45%), Gaps = 51/402 (12%)
Query: 105 SLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNV--YDSVLV 162
++ M E V + T+ +L+ +G ID A+ + D ME G PNV Y++++
Sbjct: 191 NVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCL--PNVVTYNTLID 248
Query: 163 SLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQV 222
+ +++ FKLL + + P ++ N ++ L + R E V
Sbjct: 249 GYCKLRKIDDG----FKLLRSMALKGLE-------PNLISYNVVINGLCREGRMKEVSFV 297
Query: 223 FERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLC 282
+ ++ + D YN I + G+ H +L + EM GL P + TY SLI +C
Sbjct: 298 LTEMN-RRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMC 356
Query: 283 VVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTV 342
G + A+ ++++ G PNE T+ ++ G + M++A ++ EM NG P V
Sbjct: 357 KAGNMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVV 416
Query: 343 VYNSLLN-----------------------------------GMFKSRKVMEACQLFEKM 367
YN+L+N G +S V EA ++ +M
Sbjct: 417 TYNALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREM 476
Query: 368 VQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQI 427
V+ G++ T++ LI G R + A L+ ++ + G D T++ ++ C EG +
Sbjct: 477 VEKGIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDL 536
Query: 428 EEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLM 469
E+AL+L EM +G + D+VT S L+ G +K R +RL+
Sbjct: 537 EKALQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLL 578
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/375 (22%), Positives = 167/375 (44%), Gaps = 31/375 (8%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + + G++ E +L M ++ T+ L+ +GK++ AI +L+ M
Sbjct: 382 TYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDM 441
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
+E G LSP+V Y +VL R + A+ + +++E P +
Sbjct: 442 KEKG--LSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIK-----------PDTITY 488
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
+ L+ + R E ++E + + D + Y I+A+ GDL +L+L EM
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEML-RVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMV 547
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGC------- 316
EKG++PD+ TY+ LI L + ++A + +L P++ T+ +I+ C
Sbjct: 548 EKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKS 607
Query: 317 --------CKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMV 368
C M +A ++F M PD YN +++G ++ + +A L+++MV
Sbjct: 608 VVSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMV 667
Query: 369 QDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIE 428
+ G T L+ L + G+ ++ + + + + ++V REG ++
Sbjct: 668 KSGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMD 727
Query: 429 EALRLVEEMEGRGFV 443
L ++ EM GF+
Sbjct: 728 VVLDVLAEMAKDGFL 742
>sp|Q6NQ83|PP247_ARATH Pentatricopeptide repeat-containing protein At3g22470,
mitochondrial OS=Arabidopsis thaliana GN=At3g22470 PE=2
SV=1
Length = 619
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 146/596 (24%), Positives = 260/596 (43%), Gaps = 48/596 (8%)
Query: 192 SVVES--LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCW 249
S+++S LP + N L A+ ++ ++ + F + E E D+Y I I+ +
Sbjct: 60 SMIQSRPLPTPIDFNRLCSAVART-KQYDLVLGFCKGMELNGIEHDMYTMTIMINCYCRK 118
Query: 250 GDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTH 309
L + + + G PD T+++L+ C+ G+V +A+ + + + P+ T
Sbjct: 119 KKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTV 178
Query: 310 RIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQ 369
+I G C R+ +A+ + M G PD V Y +LN + KS A LF KM +
Sbjct: 179 STLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEE 238
Query: 370 DGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEE 429
++ S ++I+ID L ++G + A +LF +++ KG D +T+S ++ LC +G+ ++
Sbjct: 239 RNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDD 298
Query: 430 ALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVE 489
+++ EM GR + D+VT S+L+ F K G+ + L + + D + + + ++
Sbjct: 299 GAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLID 358
Query: 490 ATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDE 549
K + + N D + G
Sbjct: 359 GFCKE----------------------NCLHEANQMFDLMVSKG---------------- 380
Query: 550 WSSSPYMDKLADQVKSDCHSSQLFSLARGLR-VQGKGMGTFDIDMVNTFLSIFLAKGKLN 608
P + + + S C + ++ R R + KG+ I NT + F GKLN
Sbjct: 381 --CEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTI-TYNTLVLGFCQSGKLN 437
Query: 609 LACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVI 668
A +LF+ GV P TY ++ G N+A + +M + I YN++I
Sbjct: 438 AAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIII 497
Query: 669 QGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGI 728
G+ + D A ++ L +G DVV YN +I L K G EA+MLF +M+ G
Sbjct: 498 HGMCNASKVDDAWSLFCSLSDKGVKP-DVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556
Query: 729 NPDVVTFNTLIEVN-GKAGRLKEAHYFLKMMLDSGCTPNHVTDTTLDFLG-REIDR 782
PD T+N LI + G +G + +M + + +D L R +D+
Sbjct: 557 TPDDFTYNILIRAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDMLSDRRLDK 612
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 135/555 (24%), Positives = 242/555 (43%), Gaps = 80/555 (14%)
Query: 252 LHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRI 311
++ ++ LF+ M + +P +N L + + L + ++ +G E + +T I
Sbjct: 51 VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110
Query: 312 IIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDG 371
+I C+ ++ A + G PDT+ +++L+NG +V EA L ++MV+
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170
Query: 372 VRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGIT------------------ 413
R T + LI+GL GR A L + + G D +T
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALAL 230
Query: 414 -----------------FSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGF 456
+SIV+ LC++G ++AL L EME +G D+VT SSL+ G
Sbjct: 231 DLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGL 290
Query: 457 HKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIM 516
G+WD ++++ + N++ DV+ + A ++ +K K + K +E++
Sbjct: 291 CNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGK--------LLEAKELYNEMI 342
Query: 517 SLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDC--HSSQLFS 574
+ G A D + Y + K +C ++Q+F
Sbjct: 343 T----------------RGIAPD------------TITYNSLIDGFCKENCLHEANQMFD 374
Query: 575 LARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMS 634
L + KG DI + ++ + +++ +LF + G+ P TYN+++
Sbjct: 375 L-----MVSKGCEP-DIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVL 428
Query: 635 SFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGY 694
F + G N A + EM + P + TY +++ GL G + A I +K M++
Sbjct: 429 GFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEK-MQKSRMT 487
Query: 695 LDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYF 754
L + +YN +I+ + A + D+A LF + G+ PDVVT+N +I K G L EA
Sbjct: 488 LGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADML 547
Query: 755 LKMMLDSGCTPNHVT 769
+ M + GCTP+ T
Sbjct: 548 FRKMKEDGCTPDDFT 562
Score = 147 bits (371), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 114/405 (28%), Positives = 192/405 (47%), Gaps = 12/405 (2%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
T S + +C G + E L++ M E D T+ +L KSG A+++ M
Sbjct: 177 TVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM 236
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
EE S Y V+ SL + A+S LF +E AD SL G + CN+
Sbjct: 237 EERNIKASVVQYSIVIDSLCKDGSFDDALS-LFNEMEM-KGIKADVVTYSSLIGGL-CND 293
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
+ D +++ R D+ ++ I F G L + L+ EM +
Sbjct: 294 G----KWDDGAKMLREMIGR-----NIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITR 344
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
G+ PD TYNSLI C + +A +++ + G EP+ T+ I+I CK+ R+DD
Sbjct: 345 GIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDG 404
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDG 385
M++F E+ GLIP+T+ YN+L+ G +S K+ A +LF++MV GV S T+ IL+DG
Sbjct: 405 MRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDG 464
Query: 386 LFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVD 445
L NG A +F ++K + ++I++ +C ++++A L + +G D
Sbjct: 465 LCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKGVKPD 524
Query: 446 LVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEA 490
+VT + ++ G K G + L + +++ D + + A
Sbjct: 525 VVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRA 569
Score = 143 bits (361), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 112/394 (28%), Positives = 196/394 (49%), Gaps = 18/394 (4%)
Query: 62 DSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSET 121
+S+ LD FR R I K + YS + ++C+ G ++ SL N M+ + D T
Sbjct: 225 NSALALDLFRKMEE-RNI-KASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVT 282
Query: 122 FKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYD-SVLVSLVRKKQLGLAMSILFKL 180
+ L+ GK D ++L M +G ++ P+V S L+ + K+ KL
Sbjct: 283 YSSLIGGLCNDGKWDDGAKMLREM--IGRNIIPDVVTFSALIDVFVKEG---------KL 331
Query: 181 LEACNDNTADNSVVESL-PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGY 239
LEA + + + P + N L+ K + E Q+F+ L K E DI Y
Sbjct: 332 LEA--KELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFD-LMVSKGCEPDIVTY 388
Query: 240 NICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKG 299
+I I+++ + +RLF+E+ KGL+P+ TYN+L+ C GK+ A +++E+
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 300 SGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVME 359
G P+ T+ I++ G C + ++ A++IF +MQ + + +YN +++GM + KV +
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDD 508
Query: 360 ACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVL 419
A LF + GV+ T+N++I GL + G A LF +K+ G D T++I++
Sbjct: 509 AWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIR 568
Query: 420 QLCREGQIEEALRLVEEMEGRGFVVDLVTISSLL 453
+ ++ L+EEM+ GF D TI ++
Sbjct: 569 AHLGGSGLISSVELIEEMKVCGFSADSSTIKMVI 602
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 171/402 (42%), Gaps = 47/402 (11%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y+ T+S + C G + E +L++ M E D T L+ G++ A+
Sbjct: 136 YEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEAL 195
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPG 199
++D M E G Y VL L + LA+ + K+
Sbjct: 196 VLIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKM------------------- 236
Query: 200 CVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLF 259
E++ + + Y+I I + G +L LF
Sbjct: 237 ----------------------------EERNIKASVVQYSIVIDSLCKDGSFDDALSLF 268
Query: 260 KEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS 319
EM+ KG+ D+ TY+SLI LC GK D + E+ G P+ T +I K
Sbjct: 269 NEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKE 328
Query: 320 YRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTH 379
++ +A ++++EM G+ PDT+ YNSL++G K + EA Q+F+ MV G T+
Sbjct: 329 GKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTY 388
Query: 380 NILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEG 439
+ILI+ + R + LF ++ KG + IT++ +VL C+ G++ A L +EM
Sbjct: 389 SILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVS 448
Query: 440 RGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDV 481
RG +VT LL G G + + + ++ + L +
Sbjct: 449 RGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGI 490
Score = 90.5 bits (223), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/331 (22%), Positives = 148/331 (44%), Gaps = 27/331 (8%)
Query: 81 KHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIE 140
K TYS + +C G ++ +L M +++ D TF L++ +K GK+ A E
Sbjct: 277 KADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKE 336
Query: 141 ILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL--EACNDNTADNSVVES-- 196
+ + M G + Y+S++ ++ L A + +F L+ + C + S++ +
Sbjct: 337 LYNEMITRGIAPDTITYNSLIDGFCKENCLHEA-NQMFDLMVSKGCEPDIVTYSILINSY 395
Query: 197 ---------------------LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFD 235
+P + N L++ +S + + K++F+ + +
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV-SRGVPPS 454
Query: 236 IYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWE 295
+ Y I + G+L+ +L +F++M++ + + YN +I +C KV DA ++
Sbjct: 455 VVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFC 514
Query: 296 ELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSR 355
L G +P+ T+ ++I G CK + +A +F +M+ +G PD YN L+
Sbjct: 515 SLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGS 574
Query: 356 KVMEACQLFEKMVQDGVRTSCWTHNILIDGL 386
++ + +L E+M G T ++ID L
Sbjct: 575 GLISSVELIEEMKVCGFSADSSTIKMVIDML 605
>sp|Q0WKV3|PPR36_ARATH Pentatricopeptide repeat-containing protein At1g12300,
mitochondrial OS=Arabidopsis thaliana GN=At1g12300 PE=2
SV=1
Length = 637
Score = 171 bits (434), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 131/518 (25%), Positives = 244/518 (47%), Gaps = 41/518 (7%)
Query: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQG 315
L L K+M+ KG+ +L+T + +I C K+ A ++ G+EPN T +I G
Sbjct: 108 LALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLING 167
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTS 375
C R+ +A+++ M G PD + N+L+NG+ S K EA L +KMV+ G + +
Sbjct: 168 LCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPN 227
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVE 435
T+ +++ + ++G+ A L ++++ +D + +SI++ LC+ G ++ A L
Sbjct: 228 AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFN 287
Query: 436 EMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSR 495
EME +G +++T + L+ GF GRWD +L++ + + +V+ + +++ +K
Sbjct: 288 EMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEG 347
Query: 496 KSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPY 555
K + + +L + M G A D + + D + +
Sbjct: 348 KLREAE---------ELHKEM---------------IHRGIAPDTITYTSLIDGFCKENH 383
Query: 556 MDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFE 615
+DK ++Q+ L + KG +I N ++ + +++ +LF
Sbjct: 384 LDK----------ANQMVDL-----MVSKGCDP-NIRTFNILINGYCKANRIDDGLELFR 427
Query: 616 IFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMG 675
+ GV TYN+++ F + G N A + EM + P +I TY +++ GL G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487
Query: 676 RADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTF 735
++ A I +K+ K LD+ +YN +I+ + A + D+A LF + G+ P V T+
Sbjct: 488 ESEKALEIFEKIEKS-KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546
Query: 736 NTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
N +I K G L EA + M + G P+ T L
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNIL 584
Score = 154 bits (390), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 131/549 (23%), Positives = 237/549 (43%), Gaps = 48/549 (8%)
Query: 197 LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSL 256
LP + + L A+ K+ ++ + + E K ++Y +I I+ F L +
Sbjct: 85 LPTVIDFSRLFSAIAKT-KQYDLVLALCKQMELKGIAHNLYTLSIMINCFCRCRKLCLAF 143
Query: 257 RLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGC 316
++ + G P+ T+++LI LC+ G+V +AL + + + GH+P+ T ++ G
Sbjct: 144 SAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGL 203
Query: 317 CKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSC 376
C S + +AM + +M G P+ V Y +LN M KS + A +L KM + ++
Sbjct: 204 CLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 377 WTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEE 436
++I+IDGL ++G + A+ LF +++ KG + IT++I++ C G+ ++ +L+ +
Sbjct: 264 VKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRD 323
Query: 437 MEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRK 496
M R ++VT S L+ F K G+ E L K + + D + + + ++ K
Sbjct: 324 MIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENH 383
Query: 497 SKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYM 556
+ N D + G P +
Sbjct: 384 ----------------------LDKANQMVDLMVSKG------------------CDPNI 403
Query: 557 DKLADQVKSDCHSSQL---FSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKL 613
+ C ++++ L R + ++G D NT + F GKLN+A +L
Sbjct: 404 RTFNILINGYCKANRIDDGLELFRKMSLRGV---VADTVTYNTLIQGFCELGKLNVAKEL 460
Query: 614 FEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGK 673
F+ V P TY ++ G +A + ++ + DI YN++I G+
Sbjct: 461 FQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCN 520
Query: 674 MGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVV 733
+ D A + L +G V YN +I L K G EA +LF +M G PD
Sbjct: 521 ASKVDDAWDLFCSLPLKGVKP-GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 579
Query: 734 TFNTLIEVN 742
T+N LI +
Sbjct: 580 TYNILIRAH 588
Score = 135 bits (339), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 108/419 (25%), Positives = 192/419 (45%), Gaps = 25/419 (5%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y+ T+S + +C G + E L++ M E D T L+ SGK A+
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEA---------------- 183
++D M E G + Y VL + + Q LAM +L K+ E
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 184 CNDNTADNS--------VVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFD 235
C + DN+ + + N L+ + R + ++ + ++K +
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRK-INPN 332
Query: 236 IYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWE 295
+ +++ I +F G L + L KEM +G+ PD TY SLI C + A + +
Sbjct: 333 VVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD 392
Query: 296 ELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSR 355
+ G +PN T I+I G CK+ R+DD +++F +M G++ DTV YN+L+ G +
Sbjct: 393 LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELG 452
Query: 356 KVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFS 415
K+ A +LF++MV V + T+ IL+DGL NG +E A +F ++K +D ++
Sbjct: 453 KLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYN 512
Query: 416 IVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRD 474
I++ +C ++++A L + +G + T + ++ G K G E L + + +
Sbjct: 513 IIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEE 571
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 191/394 (48%), Gaps = 25/394 (6%)
Query: 84 ACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILD 143
A TY + +C++G LL M+E ++ +D+ + ++++ K G +D A + +
Sbjct: 228 AVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFN 287
Query: 144 YMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLE-ACNDNTADNSVV-------- 194
ME G + + Y+ ++ + +L +++ N N SV+
Sbjct: 288 EMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEG 347
Query: 195 -----ESL----------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGY 239
E L P + L+ K + + Q+ + L K + +I +
Sbjct: 348 KLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVD-LMVSKGCDPNIRTF 406
Query: 240 NICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKG 299
NI I+ + + L LF++M +G+V D TYN+LIQ C +GK+ A +++E+
Sbjct: 407 NILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVS 466
Query: 300 SGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVME 359
PN T++I++ G C + + A++IF +++ + + D +YN +++GM + KV +
Sbjct: 467 RKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDD 526
Query: 360 ACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVL 419
A LF + GV+ T+NI+I GL + G A LF +++ G DG T++I++
Sbjct: 527 AWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIR 586
Query: 420 QLCREGQIEEALRLVEEMEGRGFVVDLVTISSLL 453
+G ++++L+EE++ GF VD TI ++
Sbjct: 587 AHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI 620
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 122/491 (24%), Positives = 227/491 (46%), Gaps = 19/491 (3%)
Query: 232 FEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDAL 291
+E + ++ I+ G + +L L M E G PDL T N+L+ LC+ GK +A+
Sbjct: 154 YEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAM 213
Query: 292 IVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGM 351
++ +++ G +PN T+ ++ CKS + AM++ +M+ + D V Y+ +++G+
Sbjct: 214 LLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 352 FKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDG 411
K + A LF +M G+ T+ T+NILI G GR + L D+ K+ +
Sbjct: 274 CKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNV 333
Query: 412 ITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKH 471
+TFS+++ +EG++ EA L +EM RG D +T +SL+ GF K D +++
Sbjct: 334 VTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDL 393
Query: 472 IRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLG 531
+ ++ + + K+ ++ D +F K L +++ + N
Sbjct: 394 MVSKGCDPNIRTFNILINGYCKA--NRIDDGLELF-RKMSLRGVVADTVTYNTLIQGFCE 450
Query: 532 SGEGDAKDEGSQLTNSDEWSSSPY-----MDKLADQVKSDCHSSQLFSLARGLRVQGKGM 586
G+ + E Q S + + +D L D +S+ + ++F +++ M
Sbjct: 451 LGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESE-KALEIFE-----KIEKSKM 504
Query: 587 GTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAW 646
DI + N + K++ A LF GV P TYN M+ KKG ++A
Sbjct: 505 -ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563
Query: 647 GVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTI-LDKLMKQGGGYLDVVMYNTLIN 705
+ +M E D TYN++I+ +G D ++ L + +K+ G +D +I+
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIR--AHLGDGDATKSVKLIEELKRCGFSVDASTIKMVID 621
Query: 706 VLGKAGRFDEA 716
+L GR ++
Sbjct: 622 MLSD-GRLKKS 631
Score = 122 bits (307), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 116/449 (25%), Positives = 197/449 (43%), Gaps = 41/449 (9%)
Query: 321 RMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHN 380
+ DDA+ +F +M ++ +P + ++ L + + K+++ L ++M G+ + +T +
Sbjct: 68 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127
Query: 381 ILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGR 440
I+I+ R + A++ + K G + ITFS ++ LC EG++ EAL LV+ M
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187
Query: 441 GFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRK 500
G DL+TI++L+ G G+ + EA + K
Sbjct: 188 GHKPDLITINTLVNGLCLSGK-------------------------EAEAMLLIDKMVEY 222
Query: 501 DYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLA 560
P G + +M G T L + E + K D S +D L
Sbjct: 223 GCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIK--------LDAVKYSIIIDGLC 274
Query: 561 DQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDM 620
D ++ LF+ ++ KG+ T +I N + F G+ + KL
Sbjct: 275 KHGSLD-NAFNLFN-----EMEMKGITT-NIITYNILIGGFCNAGRWDDGAKLLRDMIKR 327
Query: 621 GVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLA 680
++P T++ ++ SFVK+G +A + EM + D TY +I G K D A
Sbjct: 328 KINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKA 387
Query: 681 STILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIE 740
+ ++D LM G ++ +N LIN KA R D+ LF +M G+ D VT+NTLI+
Sbjct: 388 NQMVD-LMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQ 446
Query: 741 VNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
+ G+L A + M+ PN VT
Sbjct: 447 GFCELGKLNVAKELFQEMVSRKVPPNIVT 475
Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 128/632 (20%), Positives = 272/632 (43%), Gaps = 59/632 (9%)
Query: 57 GKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVV 116
G + + +D FR RP+ T +S +F + + + V +L M+ +
Sbjct: 63 GLVDIKADDAIDLFRDMIHSRPL--PTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIA 120
Query: 117 VDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSI 176
+ T +++ + K+ A + + +LG + + +++ L + ++ A+ +
Sbjct: 121 HNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALEL 180
Query: 177 LFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDI 236
+ +++E + P + N L+ L S + +E + +++ E + +
Sbjct: 181 VDRMVEMGHK-----------PDLITINTLVNGLCLSGKEAEAMLLIDKMVEYG-CQPNA 228
Query: 237 YGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEE 296
Y ++ G ++ L ++M+E+ + D Y+ +I LC G + +A ++ E
Sbjct: 229 VTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNE 288
Query: 297 LKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRK 356
++ G N T+ I+I G C + R DD K+ +M + P+ V ++ L++ K K
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348
Query: 357 VMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSI 416
+ EA +L ++M+ G+ T+ LIDG + + A + + KG + TF+I
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408
Query: 417 VVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGN 476
++ C+ +I++ L L +M RG V D VT ++L+ GF + G+ + + L + +
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468
Query: 477 LVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGD 536
+ +++ +K ++ + +S++ EI I + +E D + +
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKA------------LEIFEKIEKSKMELDIGIYNIIIH 516
Query: 537 AKDEGSQLTNS-DEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVN 595
S++ ++ D + S P +G++ G+ T+ N
Sbjct: 517 GMCNASKVDDAWDLFCSLPL---------------------KGVK---PGVKTY-----N 547
Query: 596 TFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEK 655
+ KG L+ A LF + G P +TYN ++ + + G ++ ++ E+
Sbjct: 548 IMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRC 607
Query: 656 FCPTDIATYNVVIQGLGKMGRADLASTILDKL 687
D +T +VI L GR L + LD L
Sbjct: 608 GFSVDASTIKMVIDMLSD-GR--LKKSFLDML 636
Score = 34.7 bits (78), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 38/188 (20%), Positives = 78/188 (41%), Gaps = 14/188 (7%)
Query: 587 GTFDIDMVNTFLSIFLAKGKLNLACKL-FEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQA 645
GT I ++N +L+ C+ F F+D N +Y + S + + A
Sbjct: 25 GTLRIALIN-------CPNELSFCCERGFSAFSDR-----NLSYRERLRSGLVDIKADDA 72
Query: 646 WGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLIN 705
+ +M + ++ + + K + DL + ++ +G + ++ + +IN
Sbjct: 73 IDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH-NLYTLSIMIN 131
Query: 706 VLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTP 765
+ + A ++ G P+ +TF+TLI GR+ EA + M++ G P
Sbjct: 132 CFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKP 191
Query: 766 NHVTDTTL 773
+ +T TL
Sbjct: 192 DLITINTL 199
>sp|Q9ASZ8|PPR37_ARATH Pentatricopeptide repeat-containing protein At1g12620
OS=Arabidopsis thaliana GN=At1g12620 PE=2 SV=1
Length = 621
Score = 169 bits (429), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 133/518 (25%), Positives = 243/518 (46%), Gaps = 49/518 (9%)
Query: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQG 315
L L K+M+ KG+ +L+T + +I C K+ A ++ G+EP+ T +I G
Sbjct: 92 LDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLING 151
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTS 375
C R+ +A+++ M G P + N+L+NG+ + KV +A L ++MV+ G + +
Sbjct: 152 LCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN 211
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVE 435
T+ ++ + ++G+ A L ++++ +D + +SI++ LC++G ++ A L
Sbjct: 212 EVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 271
Query: 436 EMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSR 495
EME +GF D++ ++L+ GF GRWD +L++ + + DV+ + A ++
Sbjct: 272 EMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDC----- 326
Query: 496 KSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPY 555
F +G L E L K+ + + D + +
Sbjct: 327 ----------FVKEGKLREAEEL------------------HKEMIQRGISPDTVTYTSL 358
Query: 556 MDKLADQVKSDCHSSQL-FSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLF 614
+D + + D + L +++G G + TF+I ++N + K NL
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGC---GPNIRTFNI-LINGYC-------KANLIDDGL 407
Query: 615 EIFTDM---GVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGL 671
E+F M GV TYN+++ F + G A + EM + DI +Y +++ GL
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467
Query: 672 GKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPD 731
G + A I +K+ K LD+ +YN +I+ + A + D+A LF + G+ PD
Sbjct: 468 CDNGEPEKALEIFEKIEKS-KMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPD 526
Query: 732 VVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
V T+N +I K G L EA + M + G +PN T
Sbjct: 527 VKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCT 564
Score = 149 bits (377), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 128/531 (24%), Positives = 230/531 (43%), Gaps = 45/531 (8%)
Query: 215 RRSEFKQVFERLK--EQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLH 272
R ++ V + K E K ++Y +I I+ L + ++ + G PD
Sbjct: 84 RTKQYDLVLDLCKQMELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTV 143
Query: 273 TYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEM 332
T+++LI LC+ G+V +AL + + + GH+P T ++ G C + ++ DA+ + M
Sbjct: 144 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRM 203
Query: 333 QYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRA 392
G P+ V Y +L M KS + A +L KM + ++ ++I+IDGL ++G
Sbjct: 204 VETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSL 263
Query: 393 EAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSL 452
+ A+ LF +++ KG D I ++ ++ C G+ ++ +L+ +M R D+V S+L
Sbjct: 264 DNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSAL 323
Query: 453 LIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYT-PMFPYKGD 511
+ F K G+ E L K + + D + + + ++ K + + ++ + KG
Sbjct: 324 IDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGC 383
Query: 512 LSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQ 571
I + N ANL D+G
Sbjct: 384 GPNIRTFNILINGYCKANL-------IDDG------------------------------ 406
Query: 572 LFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNS 631
L R + ++G D NT + F GKL +A +LF+ V P +Y
Sbjct: 407 -LELFRKMSLRGV---VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKI 462
Query: 632 MMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQG 691
++ G +A + ++ + DI YN++I G+ + D A + L +G
Sbjct: 463 LLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKG 522
Query: 692 GGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVN 742
DV YN +I L K G EA++LF +M G +P+ T+N LI +
Sbjct: 523 VKP-DVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAH 572
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 108/423 (25%), Positives = 190/423 (44%), Gaps = 33/423 (7%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y+ T+S + +C G + E L++ M E T L+ +GK+ A+
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEA---------------- 183
++D M E G + Y VL + + Q LAM +L K+ E
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 184 CNDNTADNSV-------VESLPGCVACNELLV-----ALRKSDRRSEFKQVFERLKEQKE 231
C D + DN+ ++ + L+ A R D + + +R +
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKR-----K 312
Query: 232 FEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDAL 291
D+ ++ I F G L + L KEM ++G+ PD TY SLI C ++ A
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372
Query: 292 IVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGM 351
+ + + G PN T I+I G CK+ +DD +++F +M G++ DTV YN+L+ G
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432
Query: 352 FKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDG 411
+ K+ A +LF++MV VR ++ IL+DGL NG E A +F ++K +D
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Query: 412 ITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKH 471
++I++ +C ++++A L + +G D+ T + ++ G K G + L +
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552
Query: 472 IRD 474
+ +
Sbjct: 553 MEE 555
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 96/394 (24%), Positives = 186/394 (47%), Gaps = 25/394 (6%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
++ TY + + +C++G LL M+E + +D+ + ++++ K G +D A
Sbjct: 208 FQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAF 267
Query: 140 EILDYMEELGTSLSPNVYDSVL------------VSLVRK--KQLGLAMSILFKLLEACN 185
+ + ME G +Y +++ L+R K+ + F L C
Sbjct: 268 NLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCF 327
Query: 186 DNTADNSVVESL----------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFD 235
E L P V L+ K ++ + + + L K +
Sbjct: 328 VKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLD-LMVSKGCGPN 386
Query: 236 IYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWE 295
I +NI I+ + + L LF++M +G+V D TYN+LIQ C +GK++ A +++
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446
Query: 296 ELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSR 355
E+ P+ +++I++ G C + + A++IF +++ + + D +YN +++GM +
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506
Query: 356 KVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFS 415
KV +A LF + GV+ T+NI+I GL + G A LF +++ G +G T++
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566
Query: 416 IVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTI 449
I++ EG ++ +L+EE++ GF VD T+
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTV 600
Score = 121 bits (303), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 117/482 (24%), Positives = 222/482 (46%), Gaps = 18/482 (3%)
Query: 232 FEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDAL 291
+E D ++ I+ G + +L L M E G P L T N+L+ LC+ GKV DA+
Sbjct: 138 YEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAV 197
Query: 292 IVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGM 351
++ + + +G +PNE T+ +++ CKS + AM++ +M+ + D V Y+ +++G+
Sbjct: 198 LLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGL 257
Query: 352 FKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDG 411
K + A LF +M G + + LI G GR + L D+ K+ D
Sbjct: 258 CKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDV 317
Query: 412 ITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKH 471
+ FS ++ +EG++ EA L +EM RG D VT +SL+ GF K + D ++
Sbjct: 318 VAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDL 377
Query: 472 IRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMF---PYKGDLSEIMSLIGSTNLETDA 528
+ ++ + + K+ + D +F +G +++ ++ +T ++
Sbjct: 378 MVSKGCGPNIRTFNILINGYCKA--NLIDDGLELFRKMSLRGVVADTVTY--NTLIQGFC 433
Query: 529 NLGSGEGDA---KDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKG 585
LG E ++ S+ D S +D L D + + + ++F +++
Sbjct: 434 ELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPE-KALEIFE-----KIEKSK 487
Query: 586 MGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQA 645
M DI + N + K++ A LF GV P TYN M+ KKG ++A
Sbjct: 488 M-ELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEA 546
Query: 646 WGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLIN 705
+ +M E + TYN++I+ G A ++ +++++ K+ G +D +++
Sbjct: 547 DLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEI-KRCGFSVDASTVKMVVD 605
Query: 706 VL 707
+L
Sbjct: 606 ML 607
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 91/419 (21%), Positives = 196/419 (46%), Gaps = 14/419 (3%)
Query: 67 LDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLL 126
+D F+ + RP + +S +F V R + V L M+ + + T +++
Sbjct: 57 VDLFQEMTRSRP--RPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMI 114
Query: 127 EPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACND 186
C + K+ A + + +LG + +++ L + ++ A+ ++ +++E +
Sbjct: 115 NCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 187 NTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAF 246
P + N L+ L + + S+ + +R+ E F+ + Y +
Sbjct: 175 -----------PTLITLNALVNGLCLNGKVSDAVLLIDRMVETG-FQPNEVTYGPVLKVM 222
Query: 247 GCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNE 306
G ++ L ++M+E+ + D Y+ +I LC G + +A ++ E++ G + +
Sbjct: 223 CKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 282
Query: 307 FTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEK 366
+ +I+G C + R DD K+ +M + PD V +++L++ K K+ EA +L ++
Sbjct: 283 IIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKE 342
Query: 367 MVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQ 426
M+Q G+ T+ LIDG + + + A + + KG + TF+I++ C+
Sbjct: 343 MIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANL 402
Query: 427 IEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWK 485
I++ L L +M RG V D VT ++L+ GF + G+ + + L + + + D++ +K
Sbjct: 403 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYK 461
Score = 117 bits (293), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 95/400 (23%), Positives = 177/400 (44%), Gaps = 12/400 (3%)
Query: 82 HTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEI 141
H T S + CR L S + + + D+ TF L+ G++ A+E+
Sbjct: 105 HNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALEL 164
Query: 142 LDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCV 201
+D M E+G + ++++ L ++ A+ ++ +++E P V
Sbjct: 165 VDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQ-----------PNEV 213
Query: 202 ACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKE 261
+L + KS + + ++ +++E+K + D Y+I I G L + LF E
Sbjct: 214 TYGPVLKVMCKSGQTALAMELLRKMEERK-IKLDAVKYSIIIDGLCKDGSLDNAFNLFNE 272
Query: 262 MKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYR 321
M+ KG D+ Y +LI+ C G+ D + ++ P+ +I K +
Sbjct: 273 MEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGK 332
Query: 322 MDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNI 381
+ +A ++ EM G+ PDTV Y SL++G K ++ +A + + MV G + T NI
Sbjct: 333 LREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNI 392
Query: 382 LIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRG 441
LI+G + + LF + +G D +T++ ++ C G++E A L +EM R
Sbjct: 393 LINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRR 452
Query: 442 FVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDV 481
D+V+ LL G G + + + I + LD+
Sbjct: 453 VRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492
Score = 93.2 bits (230), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 90/180 (50%), Gaps = 1/180 (0%)
Query: 594 VNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMG 653
+N ++ GK++ A L + + G P TY ++ K G A +L +M
Sbjct: 180 LNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKME 239
Query: 654 EKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRF 713
E+ D Y+++I GL K G D A + ++ M+ G D+++Y TLI AGR+
Sbjct: 240 ERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE-MEIKGFKADIIIYTTLIRGFCYAGRW 298
Query: 714 DEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
D+ L M I PDVV F+ LI+ K G+L+EA K M+ G +P+ VT T+L
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358
Score = 60.1 bits (144), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 1/169 (0%)
Query: 605 GKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATY 664
G L+ A LF G Y +++ F G ++ +L +M ++ D+ +
Sbjct: 261 GSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAF 320
Query: 665 NVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMR 724
+ +I K G+ A L K M Q G D V Y +LI+ K + D+AN + + M
Sbjct: 321 SALIDCFVKEGKLREAEE-LHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMV 379
Query: 725 TSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ G P++ TFN LI KA + + + M G + VT TL
Sbjct: 380 SKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTL 428
Score = 56.2 bits (134), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 75/160 (46%), Gaps = 1/160 (0%)
Query: 610 ACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQ 669
A LF+ T P ++ + S + ++ + +M K ++ T +++I
Sbjct: 56 AVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIMIN 115
Query: 670 GLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGIN 729
+ + LA + + K++K G D V ++TLIN L GR EA L ++M G
Sbjct: 116 CCCRCRKLSLAFSAMGKIIKLGYEP-DTVTFSTLINGLCLEGRVSEALELVDRMVEMGHK 174
Query: 730 PDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
P ++T N L+ G++ +A + M+++G PN VT
Sbjct: 175 PTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVT 214
>sp|Q9CAN5|PPR98_ARATH Pentatricopeptide repeat-containing protein At1g63080,
mitochondrial OS=Arabidopsis thaliana GN=At1g63080 PE=2
SV=1
Length = 614
Score = 169 bits (428), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 140/549 (25%), Positives = 249/549 (45%), Gaps = 42/549 (7%)
Query: 218 EFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSL 277
EF ++ + + K+F+ I +FG ++M+ G+ +L+TYN +
Sbjct: 67 EFSKLLSAIAKMKKFDLVI--------SFG------------EKMEILGVSHNLYTYNIM 106
Query: 278 IQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGL 337
I LC ++ AL + ++ G+ P+ T ++ G C R+ +A+ + +M G
Sbjct: 107 INCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGY 166
Query: 338 IPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYT 397
PDTV + +L++G+F+ K EA L E+MV G + T+ +I+GL + G + A
Sbjct: 167 QPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALN 226
Query: 398 LFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFH 457
L ++K D + +S V+ LC+ +++AL L EM+ +G D+ T SSL+
Sbjct: 227 LLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLC 286
Query: 458 KYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMS 517
YGRW RL+ + + + +V+ + + ++A K K + + E++
Sbjct: 287 NYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGK--------LIEAEKLFDEMIQ 338
Query: 518 LIGSTNLETDANLGSG--EGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSD------CHS 569
N+ T +L +G D DE Q+ ++ D L D V + C +
Sbjct: 339 RSIDPNIVTYNSLINGFCMHDRLDEAQQI-----FTLMVSKDCLPDVVTYNTLINGFCKA 393
Query: 570 SQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTY 629
++ R + + T + F + A +F+ GVHP TY
Sbjct: 394 KKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTY 453
Query: 630 NSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMK 689
N+++ K G +A V + + DI TYN++ +G+ K G+ + + L
Sbjct: 454 NTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSL 513
Query: 690 QGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLK 749
+G DV+ YNT+I+ K G +EA LF +M+ G PD T+NTLI + + G
Sbjct: 514 KGVKP-DVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKA 572
Query: 750 EAHYFLKMM 758
+ +K M
Sbjct: 573 ASAELIKEM 581
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 157/645 (24%), Positives = 264/645 (40%), Gaps = 94/645 (14%)
Query: 100 LEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDS 159
L+E L M + F LL K K D I + ME LG S + Y+
Sbjct: 46 LDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYNI 105
Query: 160 VLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEF 219
++ L R+ QL A++IL K+++ + P V N LL +R SE
Sbjct: 106 MINCLCRRSQLSFALAILGKMMK-----------LGYGPSIVTLNSLLNGFCHGNRISE- 153
Query: 220 KQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQ 279
++ L +M E G PD T+ +L+
Sbjct: 154 -----------------------------------AVALVDQMVEMGYQPDTVTFTTLVH 178
Query: 280 VLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIP 339
L K +A+ + E + G +P+ T+ +I G CK D A+ + ++M+ +
Sbjct: 179 GLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA 238
Query: 340 DTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLF 399
D V+Y+++++ + K R V +A LF +M G+R +T++ LI L GR A L
Sbjct: 239 DVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLL 298
Query: 400 CDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKY 459
D+ ++ + +TF+ ++ +EG++ EA +L +EM R ++VT +SL+ GF +
Sbjct: 299 SDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMH 358
Query: 460 GRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLI 519
R D +++ + + + DV+ + + K++K D +F D+S L+
Sbjct: 359 DRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVV--DGMELFR---DMSR-RGLV 412
Query: 520 GSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLF---SLA 576
G+T T G + SDC ++Q+ ++
Sbjct: 413 GNTVTYTTLIHGFFQA-----------------------------SDCDNAQMVFKQMVS 443
Query: 577 RGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSF 636
G+ +I NT L GKL A +FE + P YTYN M
Sbjct: 444 DGVHP--------NIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGM 495
Query: 637 VKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLD 696
K G W + + K D+ YN +I G K G + A T+ K MK+ G D
Sbjct: 496 CKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIK-MKEDGPLPD 554
Query: 697 VVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEV 741
YNTLI + G + L ++MR+ D T+ + ++
Sbjct: 555 SGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDM 599
Score = 147 bits (371), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 105/407 (25%), Positives = 199/407 (48%), Gaps = 29/407 (7%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y + T + + C + E +L++ M E D+ TF L+ + K A+
Sbjct: 131 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 190
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL----LEACNDNTADNSVVE 195
+++ M G Y +V+ L ++ + LA+++L K+ +EA D ++V++
Sbjct: 191 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEA--DVVIYSTVID 248
Query: 196 SL----------------------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFE 233
SL P + L+ L R S+ ++ + E+K
Sbjct: 249 SLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERK-IN 307
Query: 234 FDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIV 293
++ +N I AF G L + +LF EM ++ + P++ TYNSLI C+ ++ +A +
Sbjct: 308 PNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQI 367
Query: 294 WEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFK 353
+ + P+ T+ +I G CK+ ++ D M++F +M GL+ +TV Y +L++G F+
Sbjct: 368 FTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQ 427
Query: 354 SRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGIT 413
+ A +F++MV DGV + T+N L+DGL +NG+ E A +F L+K D T
Sbjct: 428 ASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYT 487
Query: 414 FSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYG 460
++I+ +C+ G++E+ L + +G D++ ++++ GF K G
Sbjct: 488 YNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKG 534
Score = 143 bits (361), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 100/388 (25%), Positives = 189/388 (48%), Gaps = 12/388 (3%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY + +C+ G + +LLN M++ + D + +++ K +D A+ + M
Sbjct: 207 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEM 266
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
+ G Y S++ L + A +L +LE + P V N
Sbjct: 267 DNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLER-----------KINPNVVTFNS 315
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
L+ A K + E +++F+ + Q+ + +I YN I+ F L + ++F M K
Sbjct: 316 LIDAFAKEGKLIEAEKLFDEMI-QRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSK 374
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
+PD+ TYN+LI C KV D + ++ ++ G N T+ +I G ++ D+A
Sbjct: 375 DCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNA 434
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDG 385
+F +M +G+ P+ + YN+LL+G+ K+ K+ +A +FE + + + +T+NI+ +G
Sbjct: 435 QMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEG 494
Query: 386 LFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVD 445
+ + G+ E + LFC L KG D I ++ ++ C++G EEA L +M+ G + D
Sbjct: 495 MCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPD 554
Query: 446 LVTISSLLIGFHKYGRWDFTERLMKHIR 473
T ++L+ + G + L+K +R
Sbjct: 555 SGTYNTLIRAHLRDGDKAASAELIKEMR 582
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 119/489 (24%), Positives = 214/489 (43%), Gaps = 51/489 (10%)
Query: 286 KVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYN 345
K+ +A+ ++ E+ S P+ ++ K + D + +M+ G+ + YN
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 346 SLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKK 405
++N + + ++ A + KM++ G S T N L++G R A L + +
Sbjct: 105 IMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEM 164
Query: 406 GKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFT 465
G D +TF+ +V L + + EA+ LVE M +G DLVT +++ G K G D
Sbjct: 165 GYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLA 224
Query: 466 ERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLE 525
L+ + G + DV+ + +++ K R + D + + + + +
Sbjct: 225 LNLLNKMEKGKIEADVVIYSTVIDSLCKYR------------HVDDALNLFTEMDNKGIR 272
Query: 526 TDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKG 585
D S S L N WS + + L+D ++ R
Sbjct: 273 PDVFTYSSLI------SCLCNYGRWSDASRL--LSDMLE---------------RKINPN 309
Query: 586 MGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQA 645
+ TF N+ + F +GKL A KLF+ + P TYNS+++ F ++A
Sbjct: 310 VVTF-----NSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEA 364
Query: 646 WGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKL-----MKQGGGYLDVVMY 700
+ M K C D+ TYN +I G K A ++D + M + G + V Y
Sbjct: 365 QQIFTLMVSKDCLPDVVTYNTLINGFCK------AKKVVDGMELFRDMSRRGLVGNTVTY 418
Query: 701 NTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLD 760
TLI+ +A D A M+F+QM + G++P+++T+NTL++ K G+L++A + +
Sbjct: 419 TTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQK 478
Query: 761 SGCTPNHVT 769
S P+ T
Sbjct: 479 SKMEPDIYT 487
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 105/453 (23%), Positives = 191/453 (42%), Gaps = 76/453 (16%)
Query: 321 RMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHN 380
++D+A+ +F EM + P V ++ LL+ + K +K EKM GV + +T+N
Sbjct: 45 KLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEILGVSHNLYTYN 104
Query: 381 ILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGR 440
I+I+ C LCR Q+ AL ++ +M
Sbjct: 105 IMIN---------------C--------------------LCRRSQLSFALAILGKMMKL 129
Query: 441 GFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRK 500
G+ +VT++SLL GF R L+ + + D + + V + K+
Sbjct: 130 GYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKA--- 186
Query: 501 DYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLA 560
SE ++L+ ++ G Q D + ++ L
Sbjct: 187 ------------SEAVALVERMVVK---------------GCQ---PDLVTYGAVINGLC 216
Query: 561 DQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDM 620
+ + D + L + +G +++ D+ + +T + ++ A LF +
Sbjct: 217 KRGEPDLALNLLNKMEKG-KIEA------DVVIYSTVIDSLCKYRHVDDALNLFTEMDNK 269
Query: 621 GVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLA 680
G+ P +TY+S++S G ++ A +L++M E+ ++ T+N +I K G+ A
Sbjct: 270 GIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEA 329
Query: 681 STILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIE 740
+ D+++++ ++V YN+LIN R DEA +F M + PDVVT+NTLI
Sbjct: 330 EKLFDEMIQRSIDP-NIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIN 388
Query: 741 VNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
KA ++ + + M G N VT TTL
Sbjct: 389 GFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTL 421
>sp|Q76C99|RF1_ORYSI Protein Rf1, mitochondrial OS=Oryza sativa subsp. indica GN=Rf1
PE=2 SV=1
Length = 791
Score = 169 bits (428), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 169/702 (24%), Positives = 309/702 (44%), Gaps = 64/702 (9%)
Query: 85 CTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEI-LD 143
CTY + CRAG L+ + L ++ + VD+ F LL+ + A++I L
Sbjct: 88 CTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLR 147
Query: 144 YMEELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCV 201
M ELG PNV Y+ +L L + + A+ +L + AD+ S P V
Sbjct: 148 RMTELGCI--PNVFSYNILLKGLCDENRSQEALELLHMM--------ADDRGGGSPPDVV 197
Query: 202 ACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKE 261
+ ++ K + + + ++ D+ YN I A + ++ +
Sbjct: 198 SYTTVINGFFKEGDSDKAYSTYHEMLDRGILP-DVVTYNSIIAALCKAQAMDKAMEVLNT 256
Query: 262 MKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYR 321
M + G++PD TYNS++ C G+ K+A+ ++++ G EP+ T+ +++ CK+ R
Sbjct: 257 MVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGR 316
Query: 322 MDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNI 381
+A KIF M GL P+ Y +LL G ++E L + MV++G+ + +I
Sbjct: 317 CMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSI 376
Query: 382 LIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRG 441
LI + G+ + A +F ++++G + +T+ V+ LC+ G++E+A+ E+M G
Sbjct: 377 LICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEG 436
Query: 442 FVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKD 501
+ +SL+ G +W+ E L+ + D + L+ + + + +++ K + +
Sbjct: 437 LSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESE 496
Query: 502 YTPMFPYKGDLSEIMSLIG-STNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLA 560
L E+M IG N+ T L +G + + MD+
Sbjct: 497 ---------KLFELMVRIGVKPNVITYNTLING----------------YCLAGKMDE-- 529
Query: 561 DQVKSDCHSSQLFS--LARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFT 618
+ +L S ++ GL+ T ++N + I ++ A LF+
Sbjct: 530 --------AMKLLSGMVSVGLKPNTVTYST----LINGYCKI----SRMEDALVLFKEME 573
Query: 619 DMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRAD 678
GV P TYN ++ + A + + E +++TYN+++ GL K D
Sbjct: 574 SSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTD 633
Query: 679 LASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTL 738
A + L L+ +N +I+ L K GR DEA LF ++G+ P+ T+ +
Sbjct: 634 DALQMFQNLCLMDLK-LEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLM 692
Query: 739 IEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTLDFLGREI 780
E G L+E M D+GCT V L+F+ RE+
Sbjct: 693 AENIIGQGLLEELDQLFLSMEDNGCT---VDSGMLNFIVREL 731
Score = 149 bits (375), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 132/511 (25%), Positives = 224/511 (43%), Gaps = 18/511 (3%)
Query: 267 LVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAM 326
+ PDL TY LI C G++ + G + +++G C R DAM
Sbjct: 83 VTPDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAM 142
Query: 327 KI-FSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQD---GVRTSCWTHNIL 382
I M G IP+ YN LL G+ + EA +L M D G ++ +
Sbjct: 143 DIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTV 202
Query: 383 IDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGF 442
I+G F+ G ++ AY+ + ++ +G D +T++ ++ LC+ +++A+ ++ M G
Sbjct: 203 INGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGV 262
Query: 443 VVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRK--SKRK 500
+ D +T +S+L G+ G+ +K +R + DV+ + ++ K+ + RK
Sbjct: 263 MPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARK 322
Query: 501 DYTPMFPYKGDLSEIMSLIGS--TNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDK 558
+ M K L ++ G+ T L G + D + S +
Sbjct: 323 IFDSM--TKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICA 380
Query: 559 LADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFT 618
A Q K D Q + +R QG V + I G++ A FE
Sbjct: 381 YAKQGKVD----QAMLVFSKMRQQGLNPNAVTYGAV---IGILCKSGRVEDAMLYFEQMI 433
Query: 619 DMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRAD 678
D G+ P N YNS++ + +A ++ EM ++ + +N +I K GR
Sbjct: 434 DEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV- 492
Query: 679 LASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTL 738
+ S L +LM + G +V+ YNTLIN AG+ DEA L M + G+ P+ VT++TL
Sbjct: 493 IESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTL 552
Query: 739 IEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
I K R+++A K M SG +P+ +T
Sbjct: 553 INGYCKISRMEDALVLFKEMESSGVSPDIIT 583
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 119/522 (22%), Positives = 215/522 (41%), Gaps = 82/522 (15%)
Query: 304 PNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQL 363
P+ T+ I+I CC++ R+D + G D + + LL G+ ++ +A +
Sbjct: 85 PDLCTYGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDI 144
Query: 364 -FEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLF---CDLKKKGKFVDGITFSIVVL 419
+M + G + +++NIL+ GL R++ A L D + G D ++++ V+
Sbjct: 145 VLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVIN 204
Query: 420 QLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVL 479
+EG ++A EM RG + D+VT +S++ K D ++ + ++
Sbjct: 205 GFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMP 264
Query: 480 DVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKD 539
D + + + + S + K G K
Sbjct: 265 DCMTYNSILHGYCSSGQPKE---------------------------------AIGFLKK 291
Query: 540 EGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFS--LARGLRVQGKGMGTFDIDMVNTF 597
S D + S MD L + + ++F RGL+ + I T
Sbjct: 292 MRSDGVEPDVVTYSLLMDYLCKNGRC-MEARKIFDSMTKRGLKPE--------ITTYGTL 342
Query: 598 LSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFC 657
L + KG L L ++ G+HP +Y ++ ++ ++ K+G +QA V ++M ++
Sbjct: 343 LQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 402
Query: 658 PTDIATYNVVIQGLGKMGRADLASTILDKLMKQG-------------------------- 691
+ TY VI L K GR + A ++++ +G
Sbjct: 403 NPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEE 462
Query: 692 --------GGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNG 743
G L+ + +N++I+ K GR E+ LFE M G+ P+V+T+NTLI
Sbjct: 463 LILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYC 522
Query: 744 KAGRLKEAHYFLKMMLDSGCTPNHVTDTTLDFLGREIDRLKD 785
AG++ EA L M+ G PN VT +TL +I R++D
Sbjct: 523 LAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMED 564
Score = 94.7 bits (234), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 94/443 (21%), Positives = 185/443 (41%), Gaps = 61/443 (13%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY + + G L E+ LL+ M + + D F +L+ K GK+D A+ + M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEA--CNDNTADNSVVESLPGC--- 200
+ G + + Y +V+ L + ++ AM ++++ N NS++ L C
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457
Query: 201 -------------------VACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNI 241
+ N ++ + K R E +++FE L + + ++ YN
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFE-LMVRIGVKPNVITYNT 516
Query: 242 CIHAFGCWGDLHTSLRL-----------------------------------FKEMKEKG 266
I+ + G + +++L FKEM+ G
Sbjct: 517 LINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSG 576
Query: 267 LVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAM 326
+ PD+ TYN ++Q L + A ++ + SG + T+ II+ G CK+ DDA+
Sbjct: 577 VSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDAL 636
Query: 327 KIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGL 386
++F + L + +N +++ + K + EA LF +G+ + WT+ ++ + +
Sbjct: 637 QMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENI 696
Query: 387 FRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDL 446
G E LF ++ G VD + +V +L + G+I A + ++ + F ++
Sbjct: 697 IGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEA 756
Query: 447 VTISSLLIGFHKYGRWDFTERLM 469
T +SL I G++ R +
Sbjct: 757 ST-ASLFIDLLSGGKYQEYYRFL 778
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/317 (18%), Positives = 125/317 (39%), Gaps = 50/317 (15%)
Query: 81 KHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIE 140
K TY+ + C AG ++E LL+ M + ++ T+ L+ K +++ A+
Sbjct: 508 KPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALV 567
Query: 141 ILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGC 200
+ ME G S Y+ +L L + ++ A
Sbjct: 568 LFKEMESSGVSPDIITYNIILQGLFQTRRTAAA--------------------------- 600
Query: 201 VACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDL-HTSLRLF 259
K+++ R+ E + ++ YNI +H C L +L++F
Sbjct: 601 -------------------KELYVRITESGT-QIELSTYNIILHGL-CKNKLTDDALQMF 639
Query: 260 KEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS 319
+ + L + T+N +I L VG+ +A ++ +G PN +T+R++ +
Sbjct: 640 QNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQ 699
Query: 320 YRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTH 379
+++ ++F M+ NG D+ + N ++ + + ++ A + + T
Sbjct: 700 GLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTA 759
Query: 380 NILIDGLFRNGRAEAAY 396
++ ID L G+ + Y
Sbjct: 760 SLFID-LLSGGKYQEYY 775
>sp|Q9LFF1|PP281_ARATH Pentatricopeptide repeat-containing protein At3g53700,
chloroplastic OS=Arabidopsis thaliana GN=MEE40 PE=2 SV=1
Length = 754
Score = 167 bits (423), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 116/420 (27%), Positives = 204/420 (48%), Gaps = 53/420 (12%)
Query: 84 ACTYSHIFRTVCRAGFLEE--VPSLLNSMQE----DDVVVDSETFKLLLEPCIKSGKIDF 137
C++S++ V GF +E V LN +QE D D TF L+ K+G +
Sbjct: 254 GCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKH 313
Query: 138 AIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESL 197
AIEI+D M + G Y+SV+ L + ++ A+ +L +++ T D S
Sbjct: 314 AIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI------TRDCS----- 362
Query: 198 PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLR 257
P V N L+ L K ++ E +
Sbjct: 363 PNTVTYNTLISTLCKENQVEE------------------------------------ATE 386
Query: 258 LFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCC 317
L + + KG++PD+ T+NSLIQ LC+ + A+ ++EE++ G EP+EFT+ ++I C
Sbjct: 387 LARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLC 446
Query: 318 KSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCW 377
++D+A+ + +M+ +G + YN+L++G K+ K EA ++F++M GV +
Sbjct: 447 SKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSV 506
Query: 378 THNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEM 437
T+N LIDGL ++ R E A L + +G+ D T++ ++ CR G I++A +V+ M
Sbjct: 507 TYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566
Query: 438 EGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKS 497
G D+VT +L+ G K GR + +L++ I+ + L + ++ + RK+
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Score = 145 bits (365), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 147/602 (24%), Positives = 261/602 (43%), Gaps = 50/602 (8%)
Query: 205 ELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEM-K 263
E+L+ L +S + K++ E +K + E + I I ++ + L + M
Sbjct: 88 EILLRLGRSGSFDDMKKILEDMKSSR-CEMGTSTFLILIESYAQFELQDEILSVVDWMID 146
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
E GL PD H YN ++ +L +K I ++ G +P+ T ++I+ C+++++
Sbjct: 147 EFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLR 206
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
A+ + +M GL+PD + +++ G + + A ++ E+MV+ G S + N+++
Sbjct: 207 PAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIV 266
Query: 384 DGLFRNGRAEAAYTLFCDLKKK-GKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGF 442
G + GR E A ++ + G F D TF+ +V LC+ G ++ A+ +++ M G+
Sbjct: 267 HGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGY 326
Query: 443 VVDLVTISSLLIGFHKYGRWDFTERLMKHI--RD--------GNLVLDVLKWKADVEATM 492
D+ T +S++ G K G ++ + RD L+ + K EAT
Sbjct: 327 DPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATE 386
Query: 493 KSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLG-------SGEGDAKDEGSQLT 545
+R K P D+ SLI L + + +G DE +
Sbjct: 387 LARVLTSKGILP------DVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440
Query: 546 NSDEWSSSPYMDKLADQVK----SDCHSSQL--------FSLARGLRVQGKGMGTFDIDM 593
D S +D+ + +K S C S + F A R + ++
Sbjct: 441 LIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHG 500
Query: 594 V-------NTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAW 646
V NT + ++ A +L + G P YTYNS+++ F + G +A
Sbjct: 501 VSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAA 560
Query: 647 GVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINV 706
++ M C DI TY +I GL K GR ++AS +L + +G L YN +I
Sbjct: 561 DIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGIN-LTPHAYNPVIQG 619
Query: 707 LGKAGRFDEANMLFEQM-RTSGINPDVVTFNTLIE--VNGKAGRLKEAHYFLKMMLDSGC 763
L + + EA LF +M + PD V++ + NG G ++EA FL +L+ G
Sbjct: 620 LFRKRKTTEAINLFREMLEQNEAPPDAVSYRIVFRGLCNG-GGPIREAVDFLVELLEKGF 678
Query: 764 TP 765
P
Sbjct: 679 VP 680
Score = 134 bits (337), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 156/690 (22%), Positives = 285/690 (41%), Gaps = 63/690 (9%)
Query: 58 KNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVV 117
++ D S L F S +P + Y I + R+G +++ +L M+ +
Sbjct: 58 RSQPDDSAALRLFNLASK-KPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEM 116
Query: 118 DSETFKLLLEPCIKSGKIDFAIEILDYM-EELGTSLSPNVYDSVLVSLVRKKQLGLAMSI 176
+ TF +L+E + D + ++D+M +E G + Y+ +L LV L
Sbjct: 117 GTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSL------ 170
Query: 177 LFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEF-- 234
KL+E + A SV P N L+ AL R + + L++ +
Sbjct: 171 --KLVEISH---AKMSVWGIKPDVSTFNVLIKALC---RAHQLRPAILMLEDMPSYGLVP 222
Query: 235 DIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVW 294
D + + + GDL +LR+ ++M E G + N ++ C G+V+DAL
Sbjct: 223 DEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFI 282
Query: 295 EELKGS-GHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFK 353
+E+ G P+++T ++ G CK+ + A++I M G PD YNS+++G+ K
Sbjct: 283 QEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342
Query: 354 SRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGIT 413
+V EA ++ ++M+ + T+N LI L + + E A L L KG D T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402
Query: 414 FSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIR 473
F+ ++ LC A+ L EEM +G D T + L+ G+ D ++K +
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462
Query: 474 DGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIG-STNLETDANLGS 532
V+ + ++ K+ K++ + ++ + M + G S N T L
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAE---------EIFDEMEVHGVSRNSVTYNTLID 513
Query: 533 GEGDAK--DEGSQLTNS--------DEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQ 582
G ++ ++ +QL + D+++ + + C + A ++
Sbjct: 514 GLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHF-------CRGGDIKKAADIVQAM 566
Query: 583 GKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYF 642
DI T +S G++ +A KL G++ + YN ++ +K
Sbjct: 567 TSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKT 626
Query: 643 NQAWGVLNEMGEKF-CPTDIATYNVVIQGLGKMG-----RADLASTILDK--------LM 688
+A + EM E+ P D +Y +V +GL G D +L+K L
Sbjct: 627 TEAINLFREMLEQNEAPPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLY 686
Query: 689 KQGGGYLDVVMYNT---LINVLGKAGRFDE 715
G L + M T L+N++ + RF E
Sbjct: 687 MLAEGLLTLSMEETLVKLVNMVMQKARFSE 716
Score = 60.5 bits (145), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 68/150 (45%)
Query: 624 PVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTI 683
P Y ++ + G F+ +L +M C +T+ ++I+ + D ++
Sbjct: 81 PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140
Query: 684 LDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNG 743
+D ++ + G D YN ++N+L + +M GI PDV TFN LI+
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200
Query: 744 KAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+A +L+ A L+ M G P+ T TT+
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTV 230
>sp|Q9LQ14|PPR96_ARATH Pentatricopeptide repeat-containing protein At1g62930,
chloroplastic OS=Arabidopsis thaliana GN=At1g62930 PE=2
SV=2
Length = 629
Score = 166 bits (421), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 129/540 (23%), Positives = 240/540 (44%), Gaps = 45/540 (8%)
Query: 236 IYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWE 295
I +N + A + L + M+ + DL++YN LI C ++ AL V
Sbjct: 80 IVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLG 139
Query: 296 ELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSR 355
++ G+EP+ T ++ G C R+ +A+ + +M P+TV +N+L++G+F
Sbjct: 140 KMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHN 199
Query: 356 KVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFS 415
K EA L ++MV G + +T+ +++GL + G + A +L ++K D + ++
Sbjct: 200 KASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYT 259
Query: 416 IVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDG 475
++ LC + +AL L EM+ +G ++VT +SL+ YGRW RL+ + +
Sbjct: 260 TIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER 319
Query: 476 NLVLDVLKWKADVEATMKSRK--SKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSG 533
+ +V+ + A ++A +K K K Y M D ++ T ++L +G
Sbjct: 320 KINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSID----------PDIFTYSSLING 369
Query: 534 EGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDM 593
D + +M +L + DC ++
Sbjct: 370 ----------FCMHDRLDEAKHMFEL--MISKDCFP--------------------NVVT 397
Query: 594 VNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMG 653
NT + F ++ +LF + G+ TYN+++ + G + A + +M
Sbjct: 398 YNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV 457
Query: 654 EKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRF 713
P DI TY++++ GL K G+ + A + + L K D+ YN +I + KAG+
Sbjct: 458 SDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEP-DIYTYNIMIEGMCKAGKV 516
Query: 714 DEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
++ LF + G+ P+V+ + T+I + G +EA + M + G PN T TL
Sbjct: 517 EDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTL 576
Score = 154 bits (388), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 121/453 (26%), Positives = 220/453 (48%), Gaps = 42/453 (9%)
Query: 50 PLVLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNS 109
PL L VLGK ++ Y+ T S + C + E +L++
Sbjct: 132 PLALAVLGK----------------MMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQ 175
Query: 110 MQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQ 169
M + ++ TF L+ K A+ ++D M G Y +V+ L ++
Sbjct: 176 MFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGD 235
Query: 170 LGLAMSILFKL----LEA------------CND---NTADNSVVES-----LPGCVACNE 205
+ LA+S+L K+ +EA CN N A N E P V N
Sbjct: 236 IDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNS 295
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
L+ L R S+ ++ + E+K ++ ++ I AF G L + +L+ EM ++
Sbjct: 296 LIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKR 354
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
+ PD+ TY+SLI C+ ++ +A ++E + PN T+ +I+G CK+ R+++
Sbjct: 355 SIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEG 414
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDG 385
M++F EM GL+ +TV YN+L+ G+F++ A ++F+KMV DGV T++IL+DG
Sbjct: 415 MELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDG 474
Query: 386 LFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVD 445
L + G+ E A +F L+K D T++I++ +C+ G++E+ L + +G +
Sbjct: 475 LCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPN 534
Query: 446 LVTISSLLIGFHKYGRWDFTERLMKHIR-DGNL 477
++ ++++ GF + G + + L + ++ DG L
Sbjct: 535 VIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Score = 145 bits (365), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 118/522 (22%), Positives = 232/522 (44%), Gaps = 41/522 (7%)
Query: 252 LHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRI 311
L ++ LF EM + +P + +N L+ + + K + + E ++ + +++ I
Sbjct: 61 LDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYNI 120
Query: 312 IIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDG 371
+I C+ ++ A+ + +M G PD V +SLLNG +++ EA L ++M
Sbjct: 121 LINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVME 180
Query: 372 VRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEAL 431
+ + T N LI GLF + +A A L + +G D T+ VV LC+ G I+ AL
Sbjct: 181 YQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLAL 240
Query: 432 RLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEAT 491
L+++ME D+V ++++ Y + L + + + +V+ + + +
Sbjct: 241 SLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCL 300
Query: 492 MKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWS 551
+ D S ++S + + + S DA + +L ++
Sbjct: 301 CN------------YGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE--- 345
Query: 552 SSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLAC 611
KL D++ +F+ + + ++ F +L+ A
Sbjct: 346 ------KLYDEMIKRSIDPDIFTYS-------------------SLINGFCMHDRLDEAK 380
Query: 612 KLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGL 671
+FE+ P TYN+++ F K + + EM ++ + TYN +IQGL
Sbjct: 381 HMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGL 440
Query: 672 GKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPD 731
+ G D+A I K++ G D++ Y+ L++ L K G+ ++A ++FE ++ S + PD
Sbjct: 441 FQAGDCDMAQKIFKKMVSDGVPP-DIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPD 499
Query: 732 VVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ T+N +IE KAG++++ + G PN + TT+
Sbjct: 500 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTM 541
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/437 (24%), Positives = 207/437 (47%), Gaps = 29/437 (6%)
Query: 75 SLRPIYKHTACTYSH---IFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIK 131
SLR +Y +A +Y + + R V L++ L M + + F LL K
Sbjct: 34 SLRGVY-FSAASYDYREKLSRNVLLDLKLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAK 92
Query: 132 SGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEA-------- 183
K D I + + M+ L S Y+ ++ R+ QL LA+++L K+++
Sbjct: 93 MNKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVT 152
Query: 184 --------CNDNTADNSV--------VESLPGCVACNELLVALRKSDRRSEFKQVFERLK 227
C+ +V +E P V N L+ L ++ SE + +R+
Sbjct: 153 LSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMV 212
Query: 228 EQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKV 287
+ + D++ Y ++ GD+ +L L K+M++ + D+ Y ++I LC V
Sbjct: 213 -ARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNV 271
Query: 288 KDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSL 347
DAL ++ E+ G PN T+ +I+ C R DA ++ S+M + P+ V +++L
Sbjct: 272 NDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSAL 331
Query: 348 LNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGK 407
++ K K++EA +L+++M++ + +T++ LI+G + R + A +F + K
Sbjct: 332 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 391
Query: 408 FVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTER 467
F + +T++ ++ C+ ++EE + L EM RG V + VT ++L+ G + G D ++
Sbjct: 392 FPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQK 451
Query: 468 LMKHIRDGNLVLDVLKW 484
+ K + + D++ +
Sbjct: 452 IFKKMVSDGVPPDIITY 468
Score = 139 bits (350), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 101/397 (25%), Positives = 197/397 (49%), Gaps = 16/397 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY + +C+ G ++ SLL M++ + D + +++ ++ A+ + M
Sbjct: 222 TYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEM 281
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
+ G + PNV Y+S++ L + A +L ++E + P V
Sbjct: 282 DNKG--IRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIER-----------KINPNVVTF 328
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
+ L+ A K + E +++++ + ++ + DI+ Y+ I+ F L + +F+ M
Sbjct: 329 SALIDAFVKEGKLVEAEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 387
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
K P++ TYN+LI+ C +V++ + ++ E+ G N T+ +IQG ++ D
Sbjct: 388 SKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCD 447
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
A KIF +M +G+ PD + Y+ LL+G+ K K+ +A +FE + + + +T+NI+I
Sbjct: 448 MAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMI 507
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFV 443
+G+ + G+ E + LFC L KG + I ++ ++ CR+G EEA L EM+ G +
Sbjct: 508 EGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTL 567
Query: 444 VDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLD 480
+ T ++L+ + G + L+K +R V D
Sbjct: 568 PNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGD 604
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 137/566 (24%), Positives = 248/566 (43%), Gaps = 28/566 (4%)
Query: 197 LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSL 256
LP V N+LL A+ K ++ + ER++ + +D+Y YNI I+ F L +L
Sbjct: 77 LPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLR-ISYDLYSYNILINCFCRRSQLPLAL 135
Query: 257 RLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGC 316
+ +M + G PD+ T +SL+ C ++ +A+ + +++ ++PN T +I G
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195
Query: 317 CKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSC 376
+ +A+ + M G PD Y +++NG+ K + A L +KM + +
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255
Query: 377 WTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEE 436
+ +ID L A LF ++ KG + +T++ ++ LC G+ +A RL+ +
Sbjct: 256 VIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSD 315
Query: 437 MEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEA-TMKSR 495
M R ++VT S+L+ F K G+ E+L + ++ D+ + + + M R
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375
Query: 496 KSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAK--DEGSQL----TNSDE 549
+ K MF ++S N+ T L G AK +EG +L +
Sbjct: 376 LDEAKH---MFEL------MISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGL 426
Query: 550 WSSSPYMDKLADQV--KSDCHSSQ-LFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGK 606
++ + L + DC +Q +F ++ G+ DI + L GK
Sbjct: 427 VGNTVTYNTLIQGLFQAGDCDMAQKIFK-----KMVSDGVPP-DIITYSILLDGLCKYGK 480
Query: 607 LNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNV 666
L A +FE + P YTYN M+ K G W + + K ++ Y
Sbjct: 481 LEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTT 540
Query: 667 VIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTS 726
+I G + G + A + + MK+ G + YNTLI + G + L ++MR+
Sbjct: 541 MISGFCRKGLKEEADALFRE-MKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSC 599
Query: 727 GINPDVVTFNTLIEVNGKAGRLKEAH 752
G D T + +I + GRL++++
Sbjct: 600 GFVGDASTISMVINM-LHDGRLEKSY 624
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/270 (22%), Positives = 118/270 (43%), Gaps = 12/270 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TYS + C L+E + M D + T+ L++ K+ +++ +E+ M
Sbjct: 362 TYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
+ G + Y++++ L + +A I K++ +D + + S+
Sbjct: 422 SQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMV---SDGVPPDIITYSI-------- 470
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
LL L K + + VFE L++ K E DIY YNI I G + LF + K
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSK-MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLK 529
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
G+ P++ Y ++I C G ++A ++ E+K G PN T+ +I+ + +
Sbjct: 530 GVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAAS 589
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSR 355
++ EM+ G + D + ++N + R
Sbjct: 590 AELIKEMRSCGFVGDASTISMVINMLHDGR 619
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 1/168 (0%)
Query: 606 KLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYN 665
KL+ A LF P +N ++S+ K F+ + M D+ +YN
Sbjct: 60 KLDDAVDLFGEMVQSRPLPSIVEFNKLLSAIAKMNKFDLVISLGERMQNLRISYDLYSYN 119
Query: 666 VVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRT 725
++I + + LA +L K+MK G D+V ++L+N R EA L +QM
Sbjct: 120 ILINCFCRRSQLPLALAVLGKMMKLGYEP-DIVTLSSLLNGYCHGKRISEAVALVDQMFV 178
Query: 726 SGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
P+ VTFNTLI + EA + M+ GC P+ T T+
Sbjct: 179 MEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTV 226
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 72 WCS-SLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCI 130
+CS SL+ + K Y+ + CR G EE +L M+ED + +S T+ L+ +
Sbjct: 523 FCSLSLKGV-KPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPNSGTYNTLIRARL 581
Query: 131 KSGKIDFAIEILDYMEELG 149
+ G + E++ M G
Sbjct: 582 RDGDKAASAELIKEMRSCG 600
>sp|Q9FIT7|PP442_ARATH Pentatricopeptide repeat-containing protein At5g61990,
mitochondrial OS=Arabidopsis thaliana GN=At5g61990 PE=2
SV=1
Length = 974
Score = 166 bits (420), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 180/752 (23%), Positives = 326/752 (43%), Gaps = 92/752 (12%)
Query: 44 SIPISEPLVLQVL-GKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEE 102
SI I+ +VL VL K D SK L FF W S + + + ++S + +C G E+
Sbjct: 57 SIEINPEVVLSVLRSKRVDDPSKLLSFFNWVDS-QKVTEQKLDSFSFLALDLCNFGSFEK 115
Query: 103 VPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLV 162
S++ M E + V +E + ++ C + E +G S ++ +
Sbjct: 116 ALSVVERMIERNWPV-AEVWSSIVR-CSQ--------------EFVGKSDDGVLFGILFD 159
Query: 163 SLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQV 222
+ K + A+ + + + +E +P C LL AL + +R F V
Sbjct: 160 GYIAKGYIEEAVFVF-----------SSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDV 208
Query: 223 FERLKEQKEFEFDIYGYNICIHAFGCWGDLHT---------------------SLRLFKE 261
++ + E + FD+ Y++ I A G++ +L+L +
Sbjct: 209 YKGMVE-RNVVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKES 267
Query: 262 MKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYR 321
M KGLVP +TY+ LI LC + +++DA + E+ G + T+ ++I G K
Sbjct: 268 MICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRN 327
Query: 322 MDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNI 381
D A + EM +G+ +Y+ + M K + +A LF+ M+ G+ +
Sbjct: 328 ADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYAS 387
Query: 382 LIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRG 441
LI+G R Y L ++KK+ + T+ VV +C G ++ A +V+EM G
Sbjct: 388 LIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASG 447
Query: 442 FVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKD 501
++V ++L+ F + R+ R++K +++ + D+ + + + + K+KR D
Sbjct: 448 CRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLI---IGLSKAKRMD 504
Query: 502 YTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLAD 561
F L E++ N T SG +A E++S+ DK
Sbjct: 505 EARSF-----LVEMVENGLKPNAFTYGAFISGYIEA----------SEFASA---DKYVK 546
Query: 562 QVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMG 621
+++ +C L GL ++ + KGK+ AC + D G
Sbjct: 547 EMR-ECGVLPNKVLCTGL------------------INEYCKKGKVIEACSAYRSMVDQG 587
Query: 622 VHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLAS 681
+ TY +M+ K + A + EM K D+ +Y V+I G K+G AS
Sbjct: 588 ILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKAS 647
Query: 682 TILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEV 741
+I D+++++G +V++YN L+ ++G ++A L ++M G++P+ VT+ T+I+
Sbjct: 648 SIFDEMVEEGLTP-NVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDG 706
Query: 742 NGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
K+G L EA M G P+ TTL
Sbjct: 707 YCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTL 738
Score = 153 bits (387), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 169/747 (22%), Positives = 305/747 (40%), Gaps = 88/747 (11%)
Query: 60 SLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDS 119
++D + KL C L P+ TY + +C+ LE+ SLL M V +D+
Sbjct: 257 NVDGALKLKESMICKGLVPL----KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDN 312
Query: 120 ETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFK 179
T+ LL++ +K D A ++ M G ++ P +YD + + ++ + A ++
Sbjct: 313 HTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDG 372
Query: 180 LLEA--CNDNTADNSVVESLPGCVACN-----ELLVALRKSD----------------RR 216
++ + A S++E C N ELLV ++K +
Sbjct: 373 MIASGLIPQAQAYASLIEGY--CREKNVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSS 430
Query: 217 SEFKQVFERLKE--QKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTY 274
+ + +KE ++ Y I F ++R+ KEMKE+G+ PD+ Y
Sbjct: 431 GDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCY 490
Query: 275 NSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQY 334
NSLI L ++ +A E+ +G +PN FT+ I G ++ A K EM+
Sbjct: 491 NSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRE 550
Query: 335 NGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEA 394
G++P+ V+ L+N K KV+EAC + MV G+ T+ +L++GLF+N + +
Sbjct: 551 CGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDD 610
Query: 395 AYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLI 454
A +F +++ KG D ++ +++ + G +++A + +EM G +++ + LL
Sbjct: 611 AEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLG 670
Query: 455 GFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSE 514
GF + G + + L+ + L + + + ++ KS GDL+E
Sbjct: 671 GFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS---------------GDLAE 715
Query: 515 IMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFS 574
L L +G D T D +L
Sbjct: 716 AFRLFDEMKL---------KGLVPDSFVYTTLVD-------------------GCCRLND 747
Query: 575 LARGLRVQG---KGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGV----HPVNY 627
+ R + + G KG + N ++ GK L ++ D P +
Sbjct: 748 VERAITIFGTNKKGCAS-STAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDV 806
Query: 628 TYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKL 687
TYN M+ K+G A + ++M + TY ++ G KMGR + D+
Sbjct: 807 TYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEA 866
Query: 688 MKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTS-----GINPDVVTFNTLIEVN 742
+ G D +MY+ +IN K G +A +L +QM G + T L+
Sbjct: 867 I-AAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGF 925
Query: 743 GKAGRLKEAHYFLKMMLDSGCTPNHVT 769
K G ++ A ++ M+ P+ T
Sbjct: 926 AKVGEMEVAEKVMENMVRLQYIPDSAT 952
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 105/404 (25%), Positives = 175/404 (43%), Gaps = 59/404 (14%)
Query: 95 CRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSP 154
C+ G + E S SM + ++ D++T+ +L+ K+ K+D A EI + E G ++P
Sbjct: 568 CKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEI--FREMRGKGIAP 625
Query: 155 NVYD-SVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESL-PGCVACNELLVALRK 212
+V+ VL++ K S +F D V E L P + N LL +
Sbjct: 626 DVFSYGVLINGFSKLGNMQKASSIF-----------DEMVEEGLTPNVIIYNMLLGGFCR 674
Query: 213 SDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLH 272
S + K++ + + K + Y I + GDL + RLF EMK KGLVPD
Sbjct: 675 SGEIEKAKELLDEM-SVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSF 733
Query: 273 TYNSLIQVLCVVGKVK--------------------DALIVW------EELK-------- 298
Y +L+ C + V+ +ALI W ELK
Sbjct: 734 VYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLM 793
Query: 299 -GSGH---EPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKS 354
GS +PN+ T+ I+I CK ++ A ++F +MQ L+P + Y SLLNG K
Sbjct: 794 DGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKM 853
Query: 355 RKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITF 414
+ E +F++ + G+ ++++I+ + G A L + K DG
Sbjct: 854 GRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKL 913
Query: 415 SIVVLQ-----LCREGQIEEALRLVEEMEGRGFVVDLVTISSLL 453
SI + + G++E A +++E M ++ D T+ L+
Sbjct: 914 SISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELI 957
Score = 57.4 bits (137), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/309 (22%), Positives = 120/309 (38%), Gaps = 61/309 (19%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
Y+ + CR+G +E+ LL+ M + ++ T+ +++ KSG + A + D M+
Sbjct: 665 YNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRLFDEMK 724
Query: 147 ELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNEL 206
G VY +++ R + A++I + C +TA N L
Sbjct: 725 LKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTA------------PFNAL 772
Query: 207 LVALRKSDRRSEFKQVFERLKEQKEFEFDIYG------YNICIHAFGCWGDLHTSLRLFK 260
+ + K + +V RL + FD +G YNI I G+L + LF
Sbjct: 773 INWVFKFGKTELKTEVLNRLMDG---SFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829
Query: 261 EMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQ------ 314
+M+ L+P + TY SL+ +G+ + V++E +G EP+ + +II
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889
Query: 315 --------------------GC------CKSY--------RMDDAMKIFSEMQYNGLIPD 340
GC C++ M+ A K+ M IPD
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949
Query: 341 TVVYNSLLN 349
+ L+N
Sbjct: 950 SATVIELIN 958
Score = 37.0 bits (84), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 75/187 (40%), Gaps = 18/187 (9%)
Query: 601 FLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTD 660
++AKG + A +F + + P ++ + ++ + W V M E+ D
Sbjct: 161 YIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFD 220
Query: 661 IATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLF 720
+ TY+++I + G L +L K K+ +NV D A L
Sbjct: 221 VKTYHMLIIAHCRAGNVQLGKDVLFKTEKE--------FRTATLNV-------DGALKLK 265
Query: 721 EQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCT-PNHVTDTTLDFL--G 777
E M G+ P T++ LI+ K RL++A L M G + NH +D L G
Sbjct: 266 ESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKG 325
Query: 778 REIDRLK 784
R D K
Sbjct: 326 RNADAAK 332
>sp|Q9LVQ5|PP432_ARATH Pentatricopeptide repeat-containing protein At5g55840
OS=Arabidopsis thaliana GN=At5g55840 PE=2 SV=2
Length = 1096
Score = 165 bits (417), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 159/675 (23%), Positives = 292/675 (43%), Gaps = 55/675 (8%)
Query: 118 DSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVY--DSVLVSLVRKKQLGLAMS 175
+ + +L+ ++ G I ++EI M G +P+VY +++L S+V+ + S
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYG--FNPSVYTCNAILGSVVKSGEDVSVWS 179
Query: 176 ILFKLLE--ACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFE 233
L ++L+ C D VA +L+ + ++ E + E+ +
Sbjct: 180 FLKEMLKRKICPD--------------VATFNILINVLCAEGSFEKSSYLMQKMEKSGYA 225
Query: 234 FDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIV 293
I YN +H + G ++ L MK KG+ D+ TYN LI LC ++ ++
Sbjct: 226 PTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLL 285
Query: 294 WEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFK 353
+++ PNE T+ +I G ++ A ++ +EM GL P+ V +N+L++G
Sbjct: 286 LRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHIS 345
Query: 354 SRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGIT 413
EA ++F M G+ S ++ +L+DGL +N + A + +K+ G V IT
Sbjct: 346 EGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRIT 405
Query: 414 FSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIR 473
++ ++ LC+ G ++EA+ L+ EM G D+VT S+L+ GF K GR+ + ++ I
Sbjct: 406 YTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465
Query: 474 DGNLVLDVLKWKADVE--ATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLG 531
L + + + + M K + Y M +G + + N+ +
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMI-LEGHTRDHFTF----NVLVTSLCK 520
Query: 532 SGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDI 591
+G+ +E + SD L + V DC L G G+G+ F +
Sbjct: 521 AGKVAEAEEFMRCMTSDGI--------LPNTVSFDC-------LINGYGNSGEGLKAFSV 565
Query: 592 --DMV-----------NTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVK 638
+M + L G L A K + + YN+++++ K
Sbjct: 566 FDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCK 625
Query: 639 KGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVV 698
G +A + EM ++ D TY +I GL + G+ +A + +G + V
Sbjct: 626 SGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKV 685
Query: 699 MYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMM 758
MY ++ + KAG++ EQM G PD+VT N +I+ + G++++ + L M
Sbjct: 686 MYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEM 745
Query: 759 LDSGCTPNHVTDTTL 773
+ PN T L
Sbjct: 746 GNQNGGPNLTTYNIL 760
Score = 156 bits (394), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 157/714 (21%), Positives = 293/714 (41%), Gaps = 68/714 (9%)
Query: 67 LDFFRWCSSLRPIYKHTACTYS--HIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKL 124
L+ FR L +Y Y+ I +V ++G V S L M + + D TF +
Sbjct: 143 LEIFR----LMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNI 198
Query: 125 LLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEAC 184
L+ G + + ++ ME+ G + + Y++VL +K + A+ +LL+
Sbjct: 199 LINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI----ELLDHM 254
Query: 185 NDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIH 244
D V N L+ L +S+R ++ + ++++ ++ YN I+
Sbjct: 255 KSKGVDADVCTY-------NMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV-TYNTLIN 306
Query: 245 AFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEP 304
F G + + +L EM GL P+ T+N+LI G K+AL ++ ++ G P
Sbjct: 307 GFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTP 366
Query: 305 NEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLF 364
+E ++ +++ G CK+ D A + M+ NG+ + Y +++G+ K+ + EA L
Sbjct: 367 SEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLL 426
Query: 365 EKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCRE 424
+M +DG+ T++ LI+G + GR + A + C + + G +GI +S ++ CR
Sbjct: 427 NEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRM 486
Query: 425 GQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKW 484
G ++EA+R+ E M G D T + L+ K G+ E M+ + ++ + + +
Sbjct: 487 GCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSF 546
Query: 485 KADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQL 544
L +G G++ +
Sbjct: 547 DC-------------------------------------------LINGYGNSGEGLKAF 563
Query: 545 TNSDEWSS---SPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIF 601
+ DE + P +K C L + L+ D M NT L+
Sbjct: 564 SVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAM 623
Query: 602 LAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEK--FCPT 659
G L A LF + P +YTY S++S +KG A E + P
Sbjct: 624 CKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPN 683
Query: 660 DIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANML 719
+ Y + G+ K G+ A + M G D+V N +I+ + G+ ++ N L
Sbjct: 684 KV-MYTCFVDGMFKAGQWK-AGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDL 741
Query: 720 FEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+M P++ T+N L+ K + + + ++ +G P+ +T +L
Sbjct: 742 LPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSL 795
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 153/696 (21%), Positives = 289/696 (41%), Gaps = 99/696 (14%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + +C+ GFL+E LLN M +D + D T+ L+ K G+ A EI+ +
Sbjct: 405 TYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRI 464
Query: 146 EELGTSLSPN--VYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
+G LSPN +Y +++ + R GC+
Sbjct: 465 YRVG--LSPNGIIYSTLIYNCCRM-------------------------------GCL-- 489
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
E +++E + + D + +N+ + + G + + + M
Sbjct: 490 -------------KEAIRIYEAMILEGHTR-DHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
G++P+ +++ LI G+ A V++E+ GH P FT+ +++G CK +
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLR 595
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
+A K + DTV+YN+LL M KS + +A LF +MVQ + +T+ LI
Sbjct: 596 EAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLI 655
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFV-DGITFSIVVLQLCREGQIEEALRLVEEMEGRGF 442
GL R G+ A + + +G + + + ++ V + + GQ + + E+M+ G
Sbjct: 656 SGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGH 715
Query: 443 VVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDY 502
D+VT ++++ G+ + G+ + T L+ + + N ++ + + SKRKD
Sbjct: 716 TPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGY-----SKRKDV 770
Query: 503 TPMFP-YKGDLSEIMSLIGSTNLETDA-NLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLA 560
+ F Y+ S I++ I L + LG E + + G ++ +
Sbjct: 771 STSFLLYR---SIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTF 827
Query: 561 DQVKSDCHSSQLFSLARGLRVQGKGMG-TFDIDMVNTFLSIFLAKGKLNLACKLFEIFTD 619
+ + S C ++ + A L +G + D D + +S+ + + + +
Sbjct: 828 NMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSK 887
Query: 620 MGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEM-GEKFCPTDIATYNVVIQGLGKMGRAD 678
G+ P + Y +++ + G A+ V EM K CP ++A + +++ L K G+AD
Sbjct: 888 QGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAE-SAMVRALAKCGKAD 946
Query: 679 LASTILDKLMKQG----------------------------------GGYLDVVMYNTLI 704
A+ +L ++K G LD+V YN LI
Sbjct: 947 EATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLI 1006
Query: 705 NVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIE 740
L G A L+E+M+ G + T+ LI
Sbjct: 1007 TGLCAKGDMALAFELYEEMKGDGFLANATTYKALIR 1042
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 154/692 (22%), Positives = 286/692 (41%), Gaps = 25/692 (3%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + G + LLN M + + TF L++ I G A+++ M
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMM 359
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLE--ACNDNTADNSVVESLPGCVAC 203
E G + S Y +L L + + LA ++ C +++ L
Sbjct: 360 EAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFL 419
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
+E +V L + + + DI Y+ I+ F G T+ + +
Sbjct: 420 DEAVVLLNEMSKDG--------------IDPDIVTYSALINGFCKVGRFKTAKEIVCRIY 465
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
GL P+ Y++LI C +G +K+A+ ++E + GH + FT +++ CK+ ++
Sbjct: 466 RVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVA 525
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
+A + M +G++P+TV ++ L+NG S + ++A +F++M + G + +T+ L+
Sbjct: 526 EAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLL 585
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFV 443
GL + G A L VD + ++ ++ +C+ G + +A+ L EM R +
Sbjct: 586 KGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSIL 645
Query: 444 VDLVTISSLLIGFHKYGRWDFTERLMKHIRD-GNLVLDVLKWKADVEATMKSRKSKRKDY 502
D T +SL+ G + G+ K GN++ + + + V+ K+ + K Y
Sbjct: 646 PDSYTYTSLISGLCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIY 705
Query: 503 TPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGD-AKDEGSQLTNSDEWSSSPYMDKLAD 561
F + D I +TN D G+ + D ++ N + + + L
Sbjct: 706 ---FREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLH 762
Query: 562 QVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMG 621
S F L R + + G D ++ + L + K+ + F G
Sbjct: 763 GYSKRKDVSTSFLLYRSIILNGI---LPDKLTCHSLVLGICESNMLEIGLKILKAFICRG 819
Query: 622 VHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLAS 681
V YT+N ++S G N A+ ++ M D T + ++ L + R +
Sbjct: 820 VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879
Query: 682 TILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEV 741
+L ++ KQG + Y LIN L + G A ++ E+M I P V + ++
Sbjct: 880 MVLHEMSKQGISP-ESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRA 938
Query: 742 NGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
K G+ EA L+ ML P + TTL
Sbjct: 939 LAKCGKADEATLLLRFMLKMKLVPTIASFTTL 970
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 108/446 (24%), Positives = 198/446 (44%), Gaps = 13/446 (2%)
Query: 343 VYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDL 402
VY+ L+ + + ++ ++F M G S +T N ++ + ++G + ++ ++
Sbjct: 125 VYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEM 184
Query: 403 KKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRW 462
K+ D TF+I++ LC EG E++ L+++ME G+ +VT +++L + K GR+
Sbjct: 185 LKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRF 244
Query: 463 DFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGST 522
L+ H++ + DV + + +S + + + D+ + M
Sbjct: 245 KAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKG-----YLLLRDMRKRMIHPNEV 299
Query: 523 NLETDANLGSGEGDAKDEGSQLTNSDEWSSSP---YMDKLADQVKSDCHSSQLFSLARGL 579
T N S EG L + SP + L D S+ + + +L
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKE--ALKMFY 357
Query: 580 RVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKK 639
++ KG+ ++ L + +LA + GV TY M+ K
Sbjct: 358 MMEAKGLTPSEVS-YGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKN 416
Query: 640 GYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVM 699
G+ ++A +LNEM + DI TY+ +I G K+GR A I+ ++ + G + ++
Sbjct: 417 GFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSP-NGII 475
Query: 700 YNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMML 759
Y+TLI + G EA ++E M G D TFN L+ KAG++ EA F++ M
Sbjct: 476 YSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMT 535
Query: 760 DSGCTPNHVT-DTTLDFLGREIDRLK 784
G PN V+ D ++ G + LK
Sbjct: 536 SDGILPNTVSFDCLINGYGNSGEGLK 561
Score = 97.1 bits (240), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 95/470 (20%), Positives = 181/470 (38%), Gaps = 67/470 (14%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY + + +C+ G L E L S+ VD+ + LL KSG + A+ + M
Sbjct: 580 TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEM 639
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESL-------- 197
+ Y S++ L RK + +A ILF N N V+ +
Sbjct: 640 VQRSILPDSYTYTSLISGLCRKGKTVIA--ILFAKEAEARGNVLPNKVMYTCFVDGMFKA 697
Query: 198 -------------------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYG 238
P V N ++ + + + + + Q ++
Sbjct: 698 GQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGP-NLTT 756
Query: 239 YNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELK 298
YNI +H + D+ TS L++ + G++PD T +SL+ +C ++ L + +
Sbjct: 757 YNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFI 816
Query: 299 GSGHEPNEFTHRIIIQGCC-----------------------------------KSYRMD 323
G E + +T ++I CC +++R
Sbjct: 817 CRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQ 876
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
++ + EM G+ P++ Y L+NG+ + + A + E+M+ + + ++
Sbjct: 877 ESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMV 936
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGI-TFSIVVLQLCREGQIEEALRLVEEMEGRGF 442
L + G+A+ A TL K K V I +F+ ++ C+ G + EAL L M G
Sbjct: 937 RALAKCGKADEA-TLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGL 995
Query: 443 VVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATM 492
+DLV+ + L+ G G L + ++ + + +KA + +
Sbjct: 996 KLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLL 1045
Score = 68.6 bits (166), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 69/323 (21%), Positives = 129/323 (39%), Gaps = 49/323 (15%)
Query: 94 VCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLS 153
+C + LE +L + V VD TF +L+ C +G+I++A +++ M LG SL
Sbjct: 799 ICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLD 858
Query: 154 PNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKS 213
+ C+ ++ L ++
Sbjct: 859 KD----------------------------------------------TCDAMVSVLNRN 872
Query: 214 DRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHT 273
R E + V + +Q + Y I+ GD+ T+ + +EM + P
Sbjct: 873 HRFQESRMVLHEMSKQG-ISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVA 931
Query: 274 YNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQ 333
+++++ L GK +A ++ + P + ++ CCK+ + +A+++ M
Sbjct: 932 ESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMS 991
Query: 334 YNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLF-RNGRA 392
GL D V YN L+ G+ + A +L+E+M DG + T+ LI GL R
Sbjct: 992 NCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAF 1051
Query: 393 EAAYTLFCDLKKKGKFVDGITFS 415
A + DL +G F+ ++ S
Sbjct: 1052 SGADIILKDLLARG-FITSMSLS 1073
>sp|Q9SH60|PP103_ARATH Pentatricopeptide repeat-containing protein At1g64100
OS=Arabidopsis thaliana GN=At1g64100 PE=2 SV=2
Length = 666
Score = 164 bits (416), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 132/564 (23%), Positives = 252/564 (44%), Gaps = 35/564 (6%)
Query: 201 VACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFK 260
V CN+++ + +R ++ ++ E + +IY +NI I F L SL F
Sbjct: 107 VDCNKVIGVFVRMNRPDVAISLYRKM-EIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFG 165
Query: 261 EMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSY 320
++ + G PD+ T+N+L+ LC+ ++ +AL ++ + +G
Sbjct: 166 KLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG------------------- 206
Query: 321 RMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHN 380
+A+ +F +M GL P + +N+L+NG+ +V+EA L KMV G+ T+
Sbjct: 207 -FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYG 265
Query: 381 ILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGR 440
+++G+ + G ++A L +++ D + +S ++ +LC++G +A L EM +
Sbjct: 266 TIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEK 325
Query: 441 GFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRK 500
G ++ T + ++ GF +GRW +RL++ + + + DVL + A + A++K K
Sbjct: 326 GIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGK---- 381
Query: 501 DYTPMFPYKGDLSEIM--SLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDK 558
+F + E++ + T G + + D+ + + +SP +
Sbjct: 382 ----LFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF---DLMASPDVVT 434
Query: 559 LADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFT 618
+ C + ++ + LR + + NT + F LN A LF+
Sbjct: 435 FNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMI 494
Query: 619 DMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRAD 678
GV P T N ++ F + +A + + D YN++I G+ K + D
Sbjct: 495 SHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVD 554
Query: 679 LASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTL 738
A + L G DV YN +I+ +AN+LF +M+ +G PD T+NTL
Sbjct: 555 EAWDLFCSLPIHGVEP-DVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Query: 739 IEVNGKAGRLKEAHYFLKMMLDSG 762
I KAG + ++ + M +G
Sbjct: 614 IRGCLKAGEIDKSIELISEMRSNG 637
Score = 139 bits (351), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 159/622 (25%), Positives = 269/622 (43%), Gaps = 88/622 (14%)
Query: 135 IDFAIEILDYM-------------EELGTSLSPNVYDSVLVSLVRKKQLG------LAMS 175
+D AI+ DYM + +G + N D V +SL RK ++ + +
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPD-VAISLYRKMEIRRIPLNIYSFN 145
Query: 176 ILFKLLEACNDNTADNSVVESL------PGCVACNELLVALRKSDRRSEFKQVFERLKEQ 229
IL K C+ + S L P V N LL L DR SE +F + E
Sbjct: 146 ILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVET 205
Query: 230 KEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKD 289
E ++ LF +M E GL P + T+N+LI LC+ G+V +
Sbjct: 206 GFLE---------------------AVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLE 244
Query: 290 ALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLN 349
A + ++ G G + T+ I+ G CK A+ + S+M+ + PD V+Y+++++
Sbjct: 245 AAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIID 304
Query: 350 GMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFV 409
+ K +A LF +M++ G+ + +T+N +IDG GR A L D+ ++
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 410 DGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLM 469
D +TF+ ++ +EG++ EA +L +EM R D VT +S++ GF K+ R+D
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDA---- 420
Query: 470 KHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEI--MSLIGSTN---- 523
KH+ D DV+ + ++ ++KR D L EI L+ +T
Sbjct: 421 KHMFDLMASPDVVTFNTIIDVYC---RAKRVDEGMQL-----LREISRRGLVANTTTYNT 472
Query: 524 -----LETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARG 578
E D NL + + ++ S D + + + + K + + +LF + +
Sbjct: 473 LIHGFCEVD-NLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLE-EALELFEVIQ- 529
Query: 579 LRVQGKGMGTFDIDMV--NTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSF 636
M D+D V N + K++ A LF GV P TYN M+S F
Sbjct: 530 -------MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGF 582
Query: 637 VKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQG--GGY 694
K + A + ++M + D +TYN +I+G K G D + ++ ++ G G
Sbjct: 583 CGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDA 642
Query: 695 LDVVMYNTLINVLGKAGRFDEA 716
+ M LI GR D++
Sbjct: 643 FTIKMVADLIT----DGRLDKS 660
Score = 128 bits (322), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 91/365 (24%), Positives = 175/365 (47%), Gaps = 20/365 (5%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
YS I +C+ G + L + M E + + T+ +++ G+ A +L M
Sbjct: 299 YSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMI 358
Query: 147 ELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACN 204
E ++P+V +++++ + V++ +L A + ++L C P V N
Sbjct: 359 E--REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC-----------IFPDTVTYN 405
Query: 205 ELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKE 264
++ K +R + K +F+ + D+ +N I + + ++L +E+
Sbjct: 406 SMIYGFCKHNRFDDAKHMFDLMASP-----DVVTFNTIIDVYCRAKRVDEGMQLLREISR 460
Query: 265 KGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDD 324
+GLV + TYN+LI C V + A +++E+ G P+ T I++ G C++ ++++
Sbjct: 461 RGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEE 520
Query: 325 AMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILID 384
A+++F +Q + + DTV YN +++GM K KV EA LF + GV T+N++I
Sbjct: 521 ALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMIS 580
Query: 385 GLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVV 444
G A LF +K G D T++ ++ + G+I++++ L+ EM GF
Sbjct: 581 GFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSG 640
Query: 445 DLVTI 449
D TI
Sbjct: 641 DAFTI 645
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 117/533 (21%), Positives = 228/533 (42%), Gaps = 56/533 (10%)
Query: 254 TSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIII 313
++ L+++M+ + + +++++N LI+ C K+ +L + +L G +P+ T ++
Sbjct: 124 VAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLL 183
Query: 314 QGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVR 373
G C R+ +A+ +F M G +EA LF++MV+ G+
Sbjct: 184 HGLCLEDRISEALALFGYMVETGF--------------------LEAVALFDQMVEIGLT 223
Query: 374 TSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRL 433
T N LI+GL GR A L + KG +D +T+ +V +C+ G + AL L
Sbjct: 224 PVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNL 283
Query: 434 VEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMK 493
+ +ME D+V S+++ K G + L + + + +V + ++
Sbjct: 284 LSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDG--- 340
Query: 494 SRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSS 553
F G S+ L+ +E + N D + ++ S +
Sbjct: 341 ------------FCSFGRWSDAQRLLRDM-IEREIN-----PDVLTFNALISASVKEGKL 382
Query: 554 PYMDKLADQVKSDC-------HSSQLFSLARGLRVQGKG-----MGTFDIDMVNTFLSIF 601
+KL D++ C ++S ++ + R M + D+ NT + ++
Sbjct: 383 FEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMASPDVVTFNTIIDVY 442
Query: 602 LAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEM-GEKFCPTD 660
+++ +L + G+ TYN+++ F + N A + EM CP D
Sbjct: 443 CRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP-D 501
Query: 661 IATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLF 720
T N+++ G + + + A + + +++ LD V YN +I+ + K + DEA LF
Sbjct: 502 TITCNILLYGFCENEKLEEALELFE-VIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560
Query: 721 EQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ G+ PDV T+N +I + +A+ M D+G P++ T TL
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTL 613
Score = 120 bits (301), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 102/415 (24%), Positives = 182/415 (43%), Gaps = 20/415 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY I +C+ G + +LL+ M+E + D + +++ K G A + M
Sbjct: 263 TYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEM 322
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
E G ++PNV Y+ ++ + A +L ++E E P +
Sbjct: 323 LEKG--IAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIER-----------EINPDVLTF 369
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
N L+ A K + E +++ + + + F D YN I+ F + +F M
Sbjct: 370 NALISASVKEGKLFEAEKLCDEMLHRCIFP-DTVTYNSMIYGFCKHNRFDDAKHMFDLMA 428
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
PD+ T+N++I V C +V + + + E+ G N T+ +I G C+ ++
Sbjct: 429 S----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLN 484
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
A +F EM +G+ PDT+ N LL G ++ K+ EA +LFE + + +NI+I
Sbjct: 485 AAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIII 544
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFV 443
G+ + + + A+ LFC L G D T+++++ C + I +A L +M+ G
Sbjct: 545 HGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHE 604
Query: 444 VDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSK 498
D T ++L+ G K G D + L+ +R D K + R K
Sbjct: 605 PDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMVADLITDGRLDK 659
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 95/374 (25%), Positives = 173/374 (46%), Gaps = 17/374 (4%)
Query: 90 IFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELG 149
+F + GFLE V +L + M E + TF L+ G++ A +++ M G
Sbjct: 198 LFGYMVETGFLEAV-ALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKG 256
Query: 150 TSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVA 209
+ Y +++ + + A+++L K+ E P V + ++
Sbjct: 257 LHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEET-----------HIKPDVVIYSAIIDR 305
Query: 210 LRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVP 269
L K S+ + +F + E K +++ YN I F +G + RL ++M E+ + P
Sbjct: 306 LCKDGHHSDAQYLFSEMLE-KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 270 DLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIF 329
D+ T+N+LI GK+ +A + +E+ P+ T+ +I G CK R DDA +F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 330 SEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRN 389
M PD V +N++++ ++++V E QL ++ + G+ + T+N LI G
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 390 GRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTI 449
AA LF ++ G D IT +I++ C ++EEAL L E ++ +D V
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540
Query: 450 SSLLIGFHKYGRWD 463
+ ++ G K + D
Sbjct: 541 NIIIHGMCKGSKVD 554
Score = 95.5 bits (236), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 106/463 (22%), Positives = 185/463 (39%), Gaps = 60/463 (12%)
Query: 322 MDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNI 381
+DDA+ F M + V N ++ + + A L+ KM + + ++ NI
Sbjct: 87 LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146
Query: 382 LIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRG 441
LI + + + F L K G D +TF+ ++ LC E +I EAL L M G
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206
Query: 442 FVVDL---------------VTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKA 486
F+ + +T ++L+ G GR L+ + L +DV+ +
Sbjct: 207 FLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGT 266
Query: 487 DVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTN 546
V K +K ++S + T+++ D + S
Sbjct: 267 IVNGMCKMGDTKSA------------LNLLSKMEETHIKPDVVIYSA------------- 301
Query: 547 SDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGK 606
+ D++ D H S L + +G F N + F + G+
Sbjct: 302 ------------IIDRLCKDGHHSDAQYLFSEMLEKGIAPNVF---TYNCMIDGFCSFGR 346
Query: 607 LNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNV 666
+ A +L + ++P T+N+++S+ VK+G +A + +EM + D TYN
Sbjct: 347 WSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNS 406
Query: 667 VIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTS 726
+I G K R D A + D + DVV +NT+I+V +A R DE L ++
Sbjct: 407 MIYGFCKHNRFDDAKHMFDLMASP-----DVVTFNTIIDVYCRAKRVDEGMQLLREISRR 461
Query: 727 GINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
G+ + T+NTLI + L A + M+ G P+ +T
Sbjct: 462 GLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTIT 504
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 102/243 (41%), Gaps = 46/243 (18%)
Query: 575 LARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMS 634
+ +GL + GT +VN + K LNL K+ E + P Y++++
Sbjct: 253 VGKGLHIDVVTYGT----IVNGMCKMGDTKSALNLLSKMEETH----IKPDVVIYSAIID 304
Query: 635 SFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLM------ 688
K G+ + A + +EM EK ++ TYN +I G GR A +L ++
Sbjct: 305 RLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINP 364
Query: 689 -------------KQGG---------------GYLDVVMYNTLINVLGKAGRFDEANMLF 720
K+G + D V YN++I K RFD+A +F
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424
Query: 721 EQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTLDFLGREI 780
+ M + PDVVTFNT+I+V +A R+ E L+ + G N T TL E+
Sbjct: 425 DLMAS----PDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480
Query: 781 DRL 783
D L
Sbjct: 481 DNL 483
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 73/159 (45%), Gaps = 16/159 (10%)
Query: 630 NSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMK 689
N ++ FV+ + A + +M + P +I ++N++I+ + + + KL K
Sbjct: 110 NKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTK 169
Query: 690 QGGGYLDVVMYNTLINVLGKAGR---------------FDEANMLFEQMRTSGINPDVVT 734
G DVV +NTL++ L R F EA LF+QM G+ P V+T
Sbjct: 170 LGF-QPDVVTFNTLLHGLCLEDRISEALALFGYMVETGFLEAVALFDQMVEIGLTPVVIT 228
Query: 735 FNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
FNTLI GR+ EA + M+ G + VT T+
Sbjct: 229 FNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTI 267
>sp|Q9SH26|PP102_ARATH Pentatricopeptide repeat-containing protein At1g63400
OS=Arabidopsis thaliana GN=At1g63400 PE=2 SV=1
Length = 577
Score = 164 bits (415), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 127/536 (23%), Positives = 242/536 (45%), Gaps = 45/536 (8%)
Query: 236 IYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWE 295
I+ +N + A + L ++M+ G+ +L+TYN LI C ++ AL +
Sbjct: 85 IFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALALLG 144
Query: 296 ELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSR 355
++ G+EP+ T ++ G C R+ DA+ + +M G PDT+ + +L++G+F
Sbjct: 145 KMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHN 204
Query: 356 KVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFS 415
K EA L ++MVQ G + + T+ ++++GL + G + A+ L ++ + + +S
Sbjct: 205 KASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYS 264
Query: 416 IVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDG 475
V+ LC+ ++AL L EME +G +++T SSL+ Y RW RL+ + +
Sbjct: 265 TVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIER 324
Query: 476 NLVLDVLKWKADVEATMKSRK--SKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSG 533
+ +V+ + A ++A +K K K Y M D ++ T ++L +G
Sbjct: 325 KINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSID----------PDIFTYSSLING 374
Query: 534 EGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDM 593
D + +M +L + DC ++
Sbjct: 375 ----------FCMHDRLDEAKHMFEL--MISKDCFP--------------------NVVT 402
Query: 594 VNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMG 653
NT ++ F +++ +LF + G+ TY +++ F + + A V +M
Sbjct: 403 YNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMV 462
Query: 654 EKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRF 713
+I TYN ++ GL K G+ + A + + L ++ + YN +I + KAG+
Sbjct: 463 SDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYL-QRSKMEPTIYTYNIMIEGMCKAGKV 521
Query: 714 DEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
++ LF + G+ PDV+ +NT+I + G +EA + M + G P+ T
Sbjct: 522 EDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 110/425 (25%), Positives = 213/425 (50%), Gaps = 30/425 (7%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y+ + T S + C + + +L++ M E D+ TF L+ K A+
Sbjct: 151 YEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAV 210
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL----LEACNDNTADNSVVE 195
++D M + G + Y V+ L ++ + LA ++L K+ +EA + ++V++
Sbjct: 211 ALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEA--NVVIYSTVID 268
Query: 196 SL----------------------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFE 233
SL P + + L+ L +R S+ ++ + E+K
Sbjct: 269 SLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERK-IN 327
Query: 234 FDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIV 293
++ +N I AF G L + +L+ EM ++ + PD+ TY+SLI C+ ++ +A +
Sbjct: 328 PNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHM 387
Query: 294 WEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFK 353
+E + PN T+ +I G CK+ R+D+ +++F EM GL+ +TV Y +L++G F+
Sbjct: 388 FELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQ 447
Query: 354 SRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGIT 413
+R A +F++MV DGV + T+N L+DGL +NG+ E A +F L++ T
Sbjct: 448 ARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYT 507
Query: 414 FSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIR 473
++I++ +C+ G++E+ L + +G D++ ++++ GF + G + + L + +R
Sbjct: 508 YNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMR 567
Query: 474 -DGNL 477
DG L
Sbjct: 568 EDGPL 572
Score = 138 bits (347), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 113/522 (21%), Positives = 231/522 (44%), Gaps = 41/522 (7%)
Query: 252 LHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRI 311
L ++ LF M + +P + +N L+ + + K + + E+++ G N +T+ I
Sbjct: 66 LDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNI 125
Query: 312 IIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDG 371
+I C+ ++ A+ + +M G P V +SLLNG +++ +A L ++MV+ G
Sbjct: 126 LINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMG 185
Query: 372 VRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEAL 431
R T LI GLF + +A A L + ++G + +T+ +VV LC+ G I+ A
Sbjct: 186 YRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAF 245
Query: 432 RLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEAT 491
L+ +ME ++V S+++ KY D L + + + +V+ + + +
Sbjct: 246 NLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCL 305
Query: 492 MKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWS 551
+ D S ++S + + + + DA + +L ++
Sbjct: 306 CNYERWS------------DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE--- 350
Query: 552 SSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLAC 611
KL D++ +F+ + + ++ F +L+ A
Sbjct: 351 ------KLYDEMIKRSIDPDIFTYS-------------------SLINGFCMHDRLDEAK 385
Query: 612 KLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGL 671
+FE+ P TYN++++ F K ++ + EM ++ + TY +I G
Sbjct: 386 HMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGF 445
Query: 672 GKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPD 731
+ D A + K M G + +++ YNTL++ L K G+ ++A ++FE ++ S + P
Sbjct: 446 FQARDCDNAQMVF-KQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 504
Query: 732 VVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ T+N +IE KAG++++ + G P+ + T+
Sbjct: 505 IYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTM 546
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 93/362 (25%), Positives = 181/362 (50%), Gaps = 16/362 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY + +C+ G ++ +LLN M+ + + + +++ K D A+ + M
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
E G + PNV Y S++ L ++ A +L ++E + P V
Sbjct: 287 ENKG--VRPNVITYSSLISCLCNYERWSDASRLLSDMIER-----------KINPNVVTF 333
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
N L+ A K + E +++++ + ++ + DI+ Y+ I+ F L + +F+ M
Sbjct: 334 NALIDAFVKEGKLVEAEKLYDEMI-KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMI 392
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
K P++ TYN+LI C ++ + + ++ E+ G N T+ +I G ++ D
Sbjct: 393 SKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCD 452
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
+A +F +M +G+ P+ + YN+LL+G+ K+ K+ +A +FE + + + + +T+NI+I
Sbjct: 453 NAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMI 512
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFV 443
+G+ + G+ E + LFC L KG D I ++ ++ CR+G EEA L +M G +
Sbjct: 513 EGMCKAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPL 572
Query: 444 VD 445
D
Sbjct: 573 PD 574
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 96/437 (21%), Positives = 205/437 (46%), Gaps = 25/437 (5%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
Y I R + L++ L M + + F LL K K D I + + M+
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 147 ELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEA----------------CNDNTAD 190
LG S + Y+ ++ R+ Q+ LA+++L K+++ C+
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 191 NSV--VESL------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNIC 242
++V V+ + P + L+ L ++ SE + +R+ Q+ + ++ Y +
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV-QRGCQPNLVTYGVV 231
Query: 243 IHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGH 302
++ GD+ + L +M+ + ++ Y+++I LC DAL ++ E++ G
Sbjct: 232 VNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGV 291
Query: 303 EPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQ 362
PN T+ +I C R DA ++ S+M + P+ V +N+L++ K K++EA +
Sbjct: 292 RPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEK 351
Query: 363 LFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLC 422
L+++M++ + +T++ LI+G + R + A +F + K F + +T++ ++ C
Sbjct: 352 LYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFC 411
Query: 423 REGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVL 482
+ +I+E + L EM RG V + VT ++L+ GF + D + + K + + +++
Sbjct: 412 KAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIM 471
Query: 483 KWKADVEATMKSRKSKR 499
+ ++ K+ K ++
Sbjct: 472 TYNTLLDGLCKNGKLEK 488
Score = 119 bits (297), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/465 (24%), Positives = 204/465 (43%), Gaps = 41/465 (8%)
Query: 309 HRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMV 368
+R I++ S ++DDA+ +F M + +P +N LL+ + K +K L EKM
Sbjct: 53 YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112
Query: 369 QDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIE 428
+ G+ + +T+NILI+ R + A L + K G +T S ++ C +I
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRIS 172
Query: 429 EALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADV 488
+A+ LV++M G+ D +T ++L+ G + + L+ + +++ + V
Sbjct: 173 DAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVV 232
Query: 489 EATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSD 548
K +GD+ +L+ AK E + +
Sbjct: 233 NGLCK---------------RGDIDLAFNLLNKMEA------------AKIEANVVI--- 262
Query: 549 EWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLN 608
S +D L D + LF+ ++ KG+ ++ ++ +S + +
Sbjct: 263 ---YSTVIDSLCKYRHED-DALNLFT-----EMENKGVRP-NVITYSSLISCLCNYERWS 312
Query: 609 LACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVI 668
A +L + ++P T+N+++ +FVK+G +A + +EM ++ DI TY+ +I
Sbjct: 313 DASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLI 372
Query: 669 QGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGI 728
G R D A + + LM + +VV YNTLIN KA R DE LF +M G+
Sbjct: 373 NGFCMHDRLDEAKHMFE-LMISKDCFPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGL 431
Query: 729 NPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ VT+ TLI +A A K M+ G PN +T TL
Sbjct: 432 VGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTL 476
>sp|Q9CAN0|PPR99_ARATH Pentatricopeptide repeat-containing protein At1g63130,
mitochondrial OS=Arabidopsis thaliana GN=At1g63130 PE=2
SV=1
Length = 630
Score = 162 bits (411), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 106/414 (25%), Positives = 215/414 (51%), Gaps = 12/414 (2%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y+ + T++ + + R E +L++ M D T+ +++ K G ID A+
Sbjct: 182 YQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLAL 241
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPG 199
+L ME+ +Y++++ +L K + A+++ ++ DN + P
Sbjct: 242 SLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM---------DNKGIR--PN 290
Query: 200 CVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLF 259
V N L+ L R S+ ++ + E+K ++ ++ I AF G L + +L+
Sbjct: 291 VVTYNSLIRCLCNYGRWSDASRLLSDMIERK-INPNVVTFSALIDAFVKEGKLVEAEKLY 349
Query: 260 KEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS 319
EM ++ + PD+ TY+SLI C+ ++ +A ++E + PN T+ +I+G CK+
Sbjct: 350 DEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKA 409
Query: 320 YRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTH 379
R+D+ M++F EM GL+ +TV Y +L++G F++R+ A +F++MV DGV T+
Sbjct: 410 KRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTY 469
Query: 380 NILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEG 439
+IL+DGL NG+ E A +F L++ D T++I++ +C+ G++E+ L +
Sbjct: 470 SILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSL 529
Query: 440 RGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMK 493
+G ++VT ++++ GF + G + + L + +++ + D + + A ++
Sbjct: 530 KGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHLR 583
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 128/523 (24%), Positives = 241/523 (46%), Gaps = 51/523 (9%)
Query: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQG 315
+ L ++M+ G+ +L+TY+ LI C ++ AL V ++ G+EP+ T ++ G
Sbjct: 101 ISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNG 160
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTS 375
C R+ DA+ + +M G PD+ +N+L++G+F+ + EA L ++MV G +
Sbjct: 161 FCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPD 220
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKK--KGKFVDGIT-FSIVVLQLCREGQIEEALR 432
T+ I+++GL + G + A +L LKK +GK G+ ++ ++ LC + +AL
Sbjct: 221 LVTYGIVVNGLCKRGDIDLALSL---LKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALN 277
Query: 433 LVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATM 492
L EM+ +G ++VT +SL+ YGRW RL+ + + + +V+ + A ++A +
Sbjct: 278 LFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFV 337
Query: 493 KSRK--SKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEW 550
K K K Y M D ++ T ++L +G D
Sbjct: 338 KEGKLVEAEKLYDEMIKRSID----------PDIFTYSSLING----------FCMHDRL 377
Query: 551 SSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLA 610
+ +M +L + DC ++ NT + F +++
Sbjct: 378 DEAKHMFEL--MISKDCFP--------------------NVVTYNTLIKGFCKAKRVDEG 415
Query: 611 CKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQG 670
+LF + G+ TY +++ F + + A V +M DI TY++++ G
Sbjct: 416 MELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDG 475
Query: 671 LGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINP 730
L G+ + A + + L ++ D+ YN +I + KAG+ ++ LF + G+ P
Sbjct: 476 LCNNGKVETALVVFEYL-QRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKP 534
Query: 731 DVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+VVT+ T++ + G +EA + M + G P+ T TL
Sbjct: 535 NVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTL 577
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/387 (25%), Positives = 190/387 (49%), Gaps = 25/387 (6%)
Query: 122 FKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL 181
F LL K K D I + + M+ LG S + Y ++ R+ QL LA+++L K++
Sbjct: 84 FSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSILINCFCRRSQLSLALAVLAKMM 143
Query: 182 EA----------------CNDNTADNSV--------VESLPGCVACNELLVALRKSDRRS 217
+ C+ N ++V + P N L+ L + +R S
Sbjct: 144 KLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRAS 203
Query: 218 EFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSL 277
E + +R+ K + D+ Y I ++ GD+ +L L K+M++ + P + YN++
Sbjct: 204 EAVALVDRMV-VKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTI 262
Query: 278 IQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGL 337
I LC V DAL ++ E+ G PN T+ +I+ C R DA ++ S+M +
Sbjct: 263 IDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKI 322
Query: 338 IPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYT 397
P+ V +++L++ K K++EA +L+++M++ + +T++ LI+G + R + A
Sbjct: 323 NPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKH 382
Query: 398 LFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFH 457
+F + K F + +T++ ++ C+ +++E + L EM RG V + VT ++L+ GF
Sbjct: 383 MFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFF 442
Query: 458 KYGRWDFTERLMKHIRDGNLVLDVLKW 484
+ D + + K + ++ D++ +
Sbjct: 443 QARECDNAQIVFKQMVSDGVLPDIMTY 469
Score = 139 bits (350), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 146/575 (25%), Positives = 248/575 (43%), Gaps = 36/575 (6%)
Query: 197 LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKE---FEFDIYGYNICIHAFGCWGDLH 253
P V ++LL A+ K ++ F V L EQ + ++Y Y+I I+ F L
Sbjct: 78 FPSIVEFSKLLSAIAKMNK---FDLVIS-LGEQMQNLGISHNLYTYSILINCFCRRSQLS 133
Query: 254 TSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIII 313
+L + +M + G PD+ T NSL+ C ++ DA+ + ++ G++P+ FT +I
Sbjct: 134 LALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLI 193
Query: 314 QGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVR 373
G + R +A+ + M G PD V Y ++NG+ K + A L +KM Q +
Sbjct: 194 HGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIE 253
Query: 374 TSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRL 433
+N +ID L A LF ++ KG + +T++ ++ LC G+ +A RL
Sbjct: 254 PGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 313
Query: 434 VEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEA-TM 492
+ +M R ++VT S+L+ F K G+ E+L + ++ D+ + + + M
Sbjct: 314 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 373
Query: 493 KSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAK--DEGSQLTNSDEW 550
R + K MF ++S N+ T L G AK DEG +L
Sbjct: 374 HDRLDEAKH---MFEL------MISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424
Query: 551 -----SSSPYMDKLADQVKS-DCHSSQLFSLARGLRVQGKGMGTF-DIDMVNTFLSIFLA 603
++ Y + ++ +C ++Q+ + Q G DI + L
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQI------VFKQMVSDGVLPDIMTYSILLDGLCN 478
Query: 604 KGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIAT 663
GK+ A +FE + P YTYN M+ K G W + + K ++ T
Sbjct: 479 NGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVT 538
Query: 664 YNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQM 723
Y ++ G + G + A + + MK+ G D YNTLI + G + L +M
Sbjct: 539 YTTMMSGFCRKGLKEEADALF-REMKEEGPLPDSGTYNTLIRAHLRDGDKAASAELIREM 597
Query: 724 RTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMM 758
R+ D T L+ GRL ++ FLKM+
Sbjct: 598 RSCRFVGDASTIG-LVTNMLHDGRLDKS--FLKML 629
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 111/490 (22%), Positives = 213/490 (43%), Gaps = 10/490 (2%)
Query: 286 KVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYN 345
K+ DA+ ++ ++ S P+ ++ K + D + + +MQ G+ + Y+
Sbjct: 61 KLDDAVNLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYS 120
Query: 346 SLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKK 405
L+N + ++ A + KM++ G T N L++G R A +L + +
Sbjct: 121 ILINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEM 180
Query: 406 GKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFT 465
G D TF+ ++ L R + EA+ LV+ M +G DLVT ++ G K G D
Sbjct: 181 GYQPDSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLA 240
Query: 466 ERLMKHIRDGNLVLDVLKWKADVEA--TMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTN 523
L+K + G + V+ + ++A K+ +T M KG +++ ++
Sbjct: 241 LSLLKKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEM-DNKGIRPNVVTY--NSL 297
Query: 524 LETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQG 583
+ N G D L++ E +P + + + + +L +
Sbjct: 298 IRCLCNYGRWS----DASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMI 353
Query: 584 KGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFN 643
K DI ++ ++ F +L+ A +FE+ P TYN+++ F K +
Sbjct: 354 KRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVD 413
Query: 644 QAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTL 703
+ + EM ++ + TY +I G + D A + K M G D++ Y+ L
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIHGFFQARECDNAQIVF-KQMVSDGVLPDIMTYSIL 472
Query: 704 INVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGC 763
++ L G+ + A ++FE ++ S + PD+ T+N +IE KAG++++ + G
Sbjct: 473 LDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGV 532
Query: 764 TPNHVTDTTL 773
PN VT TT+
Sbjct: 533 KPNVVTYTTM 542
Score = 84.0 bits (206), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 93/190 (48%), Gaps = 4/190 (2%)
Query: 595 NTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGE 654
NT + +N A LF + G+ P TYNS++ G ++ A +L++M E
Sbjct: 260 NTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIE 319
Query: 655 KFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFD 714
+ ++ T++ +I K G+ A + D+++K+ D+ Y++LIN R D
Sbjct: 320 RKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDP-DIFTYSSLINGFCMHDRLD 378
Query: 715 EANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTLD 774
EA +FE M + P+VVT+NTLI+ KA R+ E + M G N VT TTL
Sbjct: 379 EAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLI 438
Query: 775 ---FLGREID 781
F RE D
Sbjct: 439 HGFFQARECD 448
Score = 35.8 bits (81), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 2/76 (2%)
Query: 72 WCS-SLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCI 130
+CS SL+ + K TY+ + CR G EE +L M+E+ + DS T+ L+ +
Sbjct: 524 FCSLSLKGV-KPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGPLPDSGTYNTLIRAHL 582
Query: 131 KSGKIDFAIEILDYME 146
+ G + E++ M
Sbjct: 583 RDGDKAASAELIREMR 598
>sp|O64624|PP163_ARATH Pentatricopeptide repeat-containing protein At2g18940
OS=Arabidopsis thaliana GN=At2g18940 PE=2 SV=1
Length = 822
Score = 162 bits (409), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 140/576 (24%), Positives = 248/576 (43%), Gaps = 42/576 (7%)
Query: 230 KEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKV-K 288
+E+ D+ Y +HA+ G ++ LF+ MKE G P L TYN ++ V +G+ +
Sbjct: 204 QEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVILDVFGKMGRSWR 263
Query: 289 DALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLL 348
L V +E++ G + +EFT ++ C + + +A + F+E++ G P TV YN+LL
Sbjct: 264 KILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALL 323
Query: 349 NGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKF 408
K+ EA + ++M ++ T+N L+ R G ++ A + + KKG
Sbjct: 324 QVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVM 383
Query: 409 VDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERL 468
+ IT++ V+ + G+ +EAL+L M+ G V + T +++L K R + ++
Sbjct: 384 PNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKM 443
Query: 469 MKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMF---------PYKGDLSEIMSLI 519
+ ++ + W + + K K +F P + + ++S
Sbjct: 444 LCDMKSNGCSPNRATW--NTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY 501
Query: 520 GSTNLETDANLGSGEGDAKDEGSQLTNSD----------EWSSSPYMDKLADQVKSDCHS 569
G E DA+ GE + +T + +W S + + +KS
Sbjct: 502 GRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG---ENVISDMKSKGFK 558
Query: 570 SQLFSLARGLRVQGKGMGTFDIDMVNT-------FLSIFLAKGKL--NLACKL------- 613
S + L+ KG I+ + F S L + L N C+
Sbjct: 559 PTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERA 618
Query: 614 FEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGK 673
F +F G P +NSM+S F + ++QA G+L + E D+ TYN ++ +
Sbjct: 619 FTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVR 678
Query: 674 MGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVV 733
G A IL K +++ D+V YNT+I + G EA + +M GI P +
Sbjct: 679 RGECWKAEEIL-KTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIF 737
Query: 734 TFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
T+NT + G E ++ M + C PN +T
Sbjct: 738 TYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNELT 773
Score = 136 bits (342), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 135/589 (22%), Positives = 256/589 (43%), Gaps = 41/589 (6%)
Query: 202 ACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWG-DLHTSLRLFK 260
A +L A ++ + + +FER+KE + YN+ + FG G L +
Sbjct: 212 AYTTILHAYSRTGKYEKAIDLFERMKEMGPSP-TLVTYNVILDVFGKMGRSWRKILGVLD 270
Query: 261 EMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSY 320
EM+ KGL D T ++++ G +++A + ELK G+EP T+ ++Q K+
Sbjct: 271 EMRSKGLKFDEFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNALLQVFGKAG 330
Query: 321 RMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHN 380
+A+ + EM+ N D+V YN L+ ++ EA + E M + GV + T+
Sbjct: 331 VYTEALSVLKEMEENSCPADSVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYT 390
Query: 381 ILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGR 440
+ID + G+ + A LF +K+ G + T++ V+ L ++ + E ++++ +M+
Sbjct: 391 TVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSN 450
Query: 441 GFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRK 500
G + T +++L G F R+ + ++ D + + A R
Sbjct: 451 GCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSCGFEPDRDTFNTLISAY--GRCGSEV 508
Query: 501 DYTPMFP------YKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSP 554
D + M+ + ++ +L+ + L + SGE D S+ E S S
Sbjct: 509 DASKMYGEMTRAGFNACVTTYNALLNA--LARKGDWRSGENVISDMKSKGFKPTETSYSL 566
Query: 555 YMDKLA--------DQVKSDCHSSQLFS---------LA----RGLRVQGKGMGTF---- 589
+ A +++++ Q+F LA R L + F
Sbjct: 567 MLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHG 626
Query: 590 ---DIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAW 646
D+ + N+ LSIF + A + E + G+ P TYNS+M +V++G +A
Sbjct: 627 YKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAE 686
Query: 647 GVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINV 706
+L + + D+ +YN VI+G + G A +L ++ ++G + YNT ++
Sbjct: 687 EILKTLEKSQLKPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPC-IFTYNTFVSG 745
Query: 707 LGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFL 755
G F E + E M + P+ +TF +++ +AG+ EA F+
Sbjct: 746 YTAMGMFAEIEDVIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFV 794
Score = 125 bits (314), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 134/625 (21%), Positives = 255/625 (40%), Gaps = 67/625 (10%)
Query: 106 LLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLV 165
LL+ + + ++D + +L ++GK + AI++ + M+E+G S + Y+ +L
Sbjct: 197 LLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEMGPSPTLVTYNVIL---- 252
Query: 166 RKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFER 225
G K+L ++ + + C+ +L A + E K+ F
Sbjct: 253 --DVFGKMGRSWRKILGVLDEMRSKGLKFDEF----TCSTVLSACAREGLLREAKEFFAE 306
Query: 226 LKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVG 285
LK +E YN + FG G +L + KEM+E D TYN L+ G
Sbjct: 307 LKSCG-YEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVAAYVRAG 365
Query: 286 KVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYN 345
K+A V E + G PN T+ +I K+ + D+A+K+F M+ G +P+T YN
Sbjct: 366 FSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVPNTCTYN 425
Query: 346 SLLNGMFKSRKVMEACQLFEKMVQDGVRT--SCW-------------------------- 377
++L+ + K + E ++ M +G + W
Sbjct: 426 AVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKGMDKFVNRVFREMKSC 485
Query: 378 -------THNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEA 430
T N LI R G A ++ ++ + G T++ ++ L R+G
Sbjct: 486 GFEPDRDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSG 545
Query: 431 LRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEA 490
++ +M+ +GF + S +L + K G + ER+ I++G + + + + A
Sbjct: 546 ENVISDMKSKGFKPTETSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLA 605
Query: 491 TMKSRK--SKRKDYTPMFP---YKGDL---SEIMSLIGSTNLETDANLGSGEGDAKDEGS 542
K R + +T +F YK D+ + ++S+ N+ A EG +
Sbjct: 606 NFKCRALAGSERAFT-LFKKHGYKPDMVIFNSMLSIFTRNNMYDQA-----EGILESIRE 659
Query: 543 QLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFL 602
+ D + + MD + +C ++ L+ K D+ NT + F
Sbjct: 660 DGLSPDLVTYNSLMDMYVR--RGECWKAEEI-----LKTLEKSQLKPDLVSYNTVIKGFC 712
Query: 603 AKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIA 662
+G + A ++ T+ G+ P +TYN+ +S + G F + V+ M + C +
Sbjct: 713 RRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIEDVIECMAKNDCRPNEL 772
Query: 663 TYNVVIQGLGKMGRADLASTILDKL 687
T+ +V+ G + G+ A + K+
Sbjct: 773 TFKMVVDGYCRAGKYSEAMDFVSKI 797
Score = 112 bits (281), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 104/467 (22%), Positives = 207/467 (44%), Gaps = 57/467 (12%)
Query: 84 ACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILD 143
+ TY+ + RAGF +E ++ M + V+ ++ T+ +++ K+GK D A+++
Sbjct: 351 SVTYNELVAAYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFY 410
Query: 144 YMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLE-ACNDNTADNSVVESLPGCVA 202
M+E G + Y++VL L +K + + +L + C+ N A + + +L G
Sbjct: 411 SMKEAGCVPNTCTYNAVLSLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKG 470
Query: 203 CNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEM 262
++ + +VF +K FE D +N I A+G G + +++ EM
Sbjct: 471 MDKFV------------NRVFREMKSCG-FEPDRDTFNTLISAYGRCGSEVDASKMYGEM 517
Query: 263 KEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS--- 319
G + TYN+L+ L G + V ++K G +P E ++ +++Q K
Sbjct: 518 TRAGFNACVTTYNALLNALARKGDWRSGENVISDMKSKGFKPTETSYSLMLQCYAKGGNY 577
Query: 320 ---YRMDDAMK-----------------------------IFSEMQYNGLIPDTVVYNSL 347
R+++ +K F+ + +G PD V++NS+
Sbjct: 578 LGIERIENRIKEGQIFPSWMLLRTLLLANFKCRALAGSERAFTLFKKHGYKPDMVIFNSM 637
Query: 348 LNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGK 407
L+ ++ +A + E + +DG+ T+N L+D R G A + L+K
Sbjct: 638 LSIFTRNNMYDQAEGILESIREDGLSPDLVTYNSLMDMYVRRGECWKAEEILKTLEKSQL 697
Query: 408 FVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTER 467
D ++++ V+ CR G ++EA+R++ EM RG + T ++ + G+ G + E
Sbjct: 698 KPDLVSYNTVIKGFCRRGLMQEAVRMLSEMTERGIRPCIFTYNTFVSGYTAMGMFAEIED 757
Query: 468 LMKHIRDGNLVLDVLKWKADVEATMKSRK--------SKRKDYTPMF 506
+++ + + + L +K V+ ++ K SK K + P F
Sbjct: 758 VIECMAKNDCRPNELTFKMVVDGYCRAGKYSEAMDFVSKIKTFDPCF 804
Score = 111 bits (278), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 112/578 (19%), Positives = 239/578 (41%), Gaps = 95/578 (16%)
Query: 241 ICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGS 300
I + G + +L ++ + + D+ Y +++ GK + A+ ++E +K
Sbjct: 180 IFVRILGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYSRTGKYEKAIDLFERMKEM 239
Query: 301 GHEPNEFTHRIIIQGCCKSYR-MDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVME 359
G P T+ +I+ K R + + EM+ GL D +++L+ + + E
Sbjct: 240 GPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFDEFTCSTVLSACAREGLLRE 299
Query: 360 ACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVL 419
A + F ++ G T+N L+ + G A ++ ++++ D +T++ +V
Sbjct: 300 AKEFFAELKSCGYEPGTVTYNALLQVFGKAGVYTEALSVLKEMEENSCPADSVTYNELVA 359
Query: 420 QLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVL 479
R G +EA ++E M +G + + +T ++++ + K G+ D +L +++ V
Sbjct: 360 AYVRAGFSKEAAGVIEMMTKKGVMPNAITYTTVIDAYGKAGKEDEALKLFYSMKEAGCVP 419
Query: 480 DVLKWKADVEATMKSRKSKRKDYTPMF---------PYKGDLSEIMSLIGSTNLETDANL 530
+ + A + ++ +KS+ + M P + + +++L G+
Sbjct: 420 NTCTYNAVL--SLLGKKSRSNEMIKMLCDMKSNGCSPNRATWNTMLALCGNKG------- 470
Query: 531 GSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFD 590
MDK ++V + S D
Sbjct: 471 -------------------------MDKFVNRVFREMKSCGFEP---------------D 490
Query: 591 IDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLN 650
D NT +S + G A K++ T G + TYN+++++ +KG + V++
Sbjct: 491 RDTFNTLISAYGRCGSEVDASKMYGEMTRAGFNACVTTYNALLNALARKGDWRSGENVIS 550
Query: 651 EMGEK-FCPTDIATYNVVIQGLGKMG---------------------------------- 675
+M K F PT+ +Y++++Q K G
Sbjct: 551 DMKSKGFKPTE-TSYSLMLQCYAKGGNYLGIERIENRIKEGQIFPSWMLLRTLLLANFKC 609
Query: 676 RADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTF 735
RA S L K+ G D+V++N+++++ + +D+A + E +R G++PD+VT+
Sbjct: 610 RALAGSERAFTLFKKHGYKPDMVIFNSMLSIFTRNNMYDQAEGILESIREDGLSPDLVTY 669
Query: 736 NTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
N+L+++ + G +A LK + S P+ V+ T+
Sbjct: 670 NSLMDMYVRRGECWKAEEILKTLEKSQLKPDLVSYNTV 707
Score = 57.4 bits (137), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Query: 660 DIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANML 719
D + ++ LG+ + +A+ +LDK+ Q LDV Y T+++ + G++++A L
Sbjct: 174 DHQVIEIFVRILGRESQYSVAAKLLDKIPLQEY-LLDVRAYTTILHAYSRTGKYEKAIDL 232
Query: 720 FEQMRTSGINPDVVTFNTLIEVNGKAGR 747
FE+M+ G +P +VT+N +++V GK GR
Sbjct: 233 FERMKEMGPSPTLVTYNVILDVFGKMGR 260
Score = 57.0 bits (136), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 51/222 (22%), Positives = 100/222 (45%), Gaps = 26/222 (11%)
Query: 556 MDKLADQVKSDCHSSQLFSLARGLRVQG---KGMGTFDIDMVNTFLSIFLAKGKLNLACK 612
+ + D VKS+ + L SL +GL G + + F+ +L + G L L +
Sbjct: 123 LSRFFDSVKSELLRTDLVSLVKGLDDSGHWERAVFLFE------WLVLSSNSGALKLDHQ 176
Query: 613 LFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLG 672
+ EIF + ++ ++ A +L+++ + D+ Y ++
Sbjct: 177 VIEIFVRI---------------LGRESQYSVAAKLLDKIPLQEYLLDVRAYTTILHAYS 221
Query: 673 KMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGR-FDEANMLFEQMRTSGINPD 731
+ G+ + A + ++ MK+ G +V YN +++V GK GR + + + ++MR+ G+ D
Sbjct: 222 RTGKYEKAIDLFER-MKEMGPSPTLVTYNVILDVFGKMGRSWRKILGVLDEMRSKGLKFD 280
Query: 732 VVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
T +T++ + G L+EA F + G P VT L
Sbjct: 281 EFTCSTVLSACAREGLLREAKEFFAELKSCGYEPGTVTYNAL 322
>sp|Q0WPZ6|PP158_ARATH Pentatricopeptide repeat-containing protein At2g17140
OS=Arabidopsis thaliana GN=At2g17140 PE=2 SV=1
Length = 874
Score = 161 bits (408), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 163/661 (24%), Positives = 298/661 (45%), Gaps = 67/661 (10%)
Query: 122 FKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL 181
+ LLLE CIK +++F + Y + + ++P Y ++L + L
Sbjct: 115 YNLLLESCIKERRVEFVSWL--YKDMVLCGIAPQTY---------------TFNLLIRAL 157
Query: 182 EACNDNTADNS--VVESLP--GCVACNELL--VALRKSDRRSEFKQVFERLKEQKEFEF- 234
C+ + D + + + +P GC NE + +R + + E L + F
Sbjct: 158 --CDSSCVDAARELFDEMPEKGCKP-NEFTFGILVRGYCKAGLTDKGLELLNAMESFGVL 214
Query: 235 -DIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIV 293
+ YN + +F G S ++ ++M+E+GLVPD+ T+NS I LC GKV DA +
Sbjct: 215 PNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRI 274
Query: 294 WEELKGSGH----EPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLN 349
+ +++ + PN T+ ++++G CK ++DA +F ++ N + YN L
Sbjct: 275 FSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQ 334
Query: 350 GMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFV 409
G+ + K +EA + ++M G+ S +++NIL+DGL + G A T+ +K+ G
Sbjct: 335 GLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCP 394
Query: 410 DGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLM 469
D +T+ ++ C G+++ A L++EM + + T + LL K GR E L+
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454
Query: 470 KHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDA- 528
+ + + LD + V+ S G+L + + ++ + A
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGS---------------GELDKAIEIVKGMRVHGSAA 499
Query: 529 --NLGSGEGDAKDEGSQLTN--SDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGK 584
NLG+ D+ N D + S ++ L + + LF+ G ++Q
Sbjct: 500 LGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLC-KAGRFAEAKNLFAEMMGEKLQPD 558
Query: 585 GMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQ 644
+ N F+ F +GK++ A ++ + G H TYNS++ K +
Sbjct: 559 SVA------YNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFE 612
Query: 645 AWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLI 704
G+++EM EK +I TYN IQ L + + + A+ +LD++M++ +V + LI
Sbjct: 613 IHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAP-NVFSFKYLI 671
Query: 705 NVLGKAGRFDEANMLFE-QMRTSGINPDVVT--FNTLIEVNGKAGRLKEAHYFLKMMLDS 761
K FD A +FE + G + + FN L+ AG+L +A L+ +LD
Sbjct: 672 EAFCKVPDFDMAQEVFETAVSICGQKEGLYSLMFNELL----AAGQLLKATELLEAVLDR 727
Query: 762 G 762
G
Sbjct: 728 G 728
Score = 155 bits (391), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 169/673 (25%), Positives = 287/673 (42%), Gaps = 94/673 (13%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
T++ + R +C + ++ L + M E + TF +L+ K+G D +E+L+ M
Sbjct: 149 TFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAM 208
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESL-PGCVACN 204
E G + +Y++++ S R+ + + ++ K+ E E L P V N
Sbjct: 209 ESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMRE------------EGLVPDIVTFN 256
Query: 205 ELLVALRKSDRRSEFKQVFERLKEQKEFEFDIY---------GYNICIHAFGCWGDLHTS 255
+ AL K + + ++F + E D Y YN+ + F G L +
Sbjct: 257 SRISALCKEGKVLDASRIFS------DMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDA 310
Query: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQG 315
LF+ ++E + L +YN +Q L GK +A V +++ G P+ +++ I++ G
Sbjct: 311 KTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDG 370
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTS 375
CK + DA I M+ NG+ PD V Y LL+G KV A L ++M+++ +
Sbjct: 371 LCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPN 430
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVE 435
+T NIL+ L++ GR A L + +KG +D +T +I+V LC G++++A+ +V+
Sbjct: 431 AYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVK 490
Query: 436 EMEGRGFVV-----------------------DLVTISSLLIGFHKYGRWDFTERLMKHI 472
M G DL+T S+LL G K GR+ + L +
Sbjct: 491 GMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEM 550
Query: 473 RDGNLVLDVLKWKADVEATMKSRK-----------SKRKDYTPMFPY---------KGDL 512
L D + + + K K K+ + + Y K +
Sbjct: 551 MGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQI 610
Query: 513 SEIMSLIG-------STNLETDAN----LGSGEG--DAK---DEGSQLTNSDEWSSSPYM 556
EI L+ S N+ T L GE DA DE Q + S Y+
Sbjct: 611 FEIHGLMDEMKEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYL 670
Query: 557 DKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEI 616
+ +V + ++F A + Q +G+ + M N LA G+L A +L E
Sbjct: 671 IEAFCKVPDFDMAQEVFETAVSICGQKEGLYSL---MFNE----LLAAGQLLKATELLEA 723
Query: 617 FTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGR 676
D G + Y ++ S KK A G+L++M ++ D A VI GLGKMG
Sbjct: 724 VLDRGFELGTFLYKDLVESLCKKDELEVASGILHKMIDRGYGFDPAALMPVIDGLGKMGN 783
Query: 677 ADLASTILDKLMK 689
A++ DK+M+
Sbjct: 784 KKEANSFADKMME 796
Score = 144 bits (363), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 136/583 (23%), Positives = 264/583 (45%), Gaps = 50/583 (8%)
Query: 218 EFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLR--LFKEMKEKGLVPDLHTYN 275
+F+ V R E K +Y YN+ + + C + L+K+M G+ P +T+N
Sbjct: 97 QFQLVRSRFPENKP---SVYLYNLLLES--CIKERRVEFVSWLYKDMVLCGIAPQTYTFN 151
Query: 276 SLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYN 335
LI+ LC V A +++E+ G +PNEFT I+++G CK+ D +++ + M+
Sbjct: 152 LLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESF 211
Query: 336 GLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAA 395
G++P+ V+YN++++ + + ++ ++ EKM ++G+ T N I L + G+ A
Sbjct: 212 GVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDA 271
Query: 396 YTLFCDLKKKGKF----VDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISS 451
+F D++ + IT+++++ C+ G +E+A L E + + L + +
Sbjct: 272 SRIFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNI 331
Query: 452 LLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMK-SRKSKRKDYTPMFPYKG 510
L G ++G++ E ++K + D + + + ++ K S K + G
Sbjct: 332 WLQGLVRHGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNG 391
Query: 511 DLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSS 570
+ ++ L ++G + AK ++ ++ ++ + L + S
Sbjct: 392 VCPDAVTY--GCLLHGYCSVGKVDA-AKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRIS 448
Query: 571 QLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVH------- 623
+ L R + +G G+ T N + G+L+ K EI M VH
Sbjct: 449 EAEELLRKMNEKGYGLDTV---TCNIIVDGLCGSGELD---KAIEIVKGMRVHGSAALGN 502
Query: 624 -------------------PVNYTYNSMMSSFVKKGYFNQAWGVLNE-MGEKFCPTDIAT 663
P TY+++++ K G F +A + E MGEK P +A
Sbjct: 503 LGNSYIGLVDDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVA- 561
Query: 664 YNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQM 723
YN+ I K G+ A +L K M++ G + + YN+LI LG + E + L ++M
Sbjct: 562 YNIFIHHFCKQGKISSAFRVL-KDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEM 620
Query: 724 RTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPN 766
+ GI+P++ T+NT I+ + ++++A L M+ PN
Sbjct: 621 KEKGISPNICTYNTAIQYLCEGEKVEDATNLLDEMMQKNIAPN 663
Score = 118 bits (295), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 185/404 (45%), Gaps = 20/404 (4%)
Query: 84 ACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILD 143
A TY + C G ++ SLL M ++ + ++ T +LL K G+I A E+L
Sbjct: 396 AVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLR 455
Query: 144 YMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL----------LEACNDNTADNSV 193
M E G L + ++ L +L A+ I+ + L D+S+
Sbjct: 456 KMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSL 515
Query: 194 VES--LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGD 251
+E+ LP + + LL L K+ R +E K +F + +K + D YNI IH F G
Sbjct: 516 IENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEK-LQPDSVAYNIFIHHFCKQGK 574
Query: 252 LHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRI 311
+ ++ R+ K+M++KG L TYNSLI L + ++ + + +E+K G PN T+
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634
Query: 312 IIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQD- 370
IQ C+ +++DA + EM + P+ + L+ K A ++FE V
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSIC 694
Query: 371 GVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEA 430
G + ++ ++ + L G+ A L + +G + + +V LC++ ++E A
Sbjct: 695 GQKEGLYS--LMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVA 752
Query: 431 LRLVEEMEGRGFVVDLVTISSLLIGFHKYGRW----DFTERLMK 470
++ +M RG+ D + ++ G K G F +++M+
Sbjct: 753 SGILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMME 796
Score = 78.6 bits (192), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 85/161 (52%), Gaps = 8/161 (4%)
Query: 616 IFTDM---GVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLG 672
++ DM G+ P YT+N ++ + + A + +EM EK C + T+ ++++G
Sbjct: 134 LYKDMVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYC 193
Query: 673 KMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDV 732
K G D +L+ M+ G + V+YNT+++ + GR D++ + E+MR G+ PD+
Sbjct: 194 KAGLTDKGLELLNA-MESFGVLPNKVIYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDI 252
Query: 733 VTFNTLIEVNGKAGRLKEA-HYFLKMMLDSGC---TPNHVT 769
VTFN+ I K G++ +A F M LD PN +T
Sbjct: 253 VTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSIT 293
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 91/191 (47%), Gaps = 11/191 (5%)
Query: 590 DIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGV-------HPVNYTYNSMMSSFVKKGYF 642
DI N+ +S +GK+ A + IF+DM + P + TYN M+ F K G
Sbjct: 251 DIVTFNSRISALCKEGKVLDASR---IFSDMELDEYLGLPRPNSITYNLMLKGFCKVGLL 307
Query: 643 NQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNT 702
A + + E + +YN+ +QGL + G+ A T+L ++ +G G + YN
Sbjct: 308 EDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQMTDKGIGP-SIYSYNI 366
Query: 703 LINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSG 762
L++ L K G +A + M+ +G+ PD VT+ L+ G++ A L+ M+ +
Sbjct: 367 LMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNN 426
Query: 763 CTPNHVTDTTL 773
C PN T L
Sbjct: 427 CLPNAYTCNIL 437
Score = 66.2 bits (160), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 92/234 (39%), Gaps = 58/234 (24%)
Query: 601 FLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTD 660
+ + GK++ A L + P YT N ++ S K G ++A +L +M EK D
Sbjct: 406 YCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLD 465
Query: 661 IATYNVVIQGLGKMGRADLASTILDKLMKQGGGYL----------------------DVV 698
T N+++ GL G D A I+ + G L D++
Sbjct: 466 TVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNCLPDLI 525
Query: 699 MYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVV------------------------- 733
Y+TL+N L KAGRF EA LF +M + PD V
Sbjct: 526 TYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDM 585
Query: 734 ----------TFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT-DTTLDFL 776
T+N+LI G ++ E H + M + G +PN T +T + +L
Sbjct: 586 EKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYL 639
Score = 45.1 bits (105), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 63/146 (43%), Gaps = 5/146 (3%)
Query: 631 SMMSSFVKKGYFNQAWGVLNEMGEKFCPTD---IATYNVVIQGLGKMGRADLASTILDKL 687
S++S F K + ++A+ + +F P + + YN++++ K R + S L K
Sbjct: 80 SVVSIFAKSNHIDKAFPQFQLVRSRF-PENKPSVYLYNLLLESCIKERRVEFVSW-LYKD 137
Query: 688 MKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGR 747
M G +N LI L + D A LF++M G P+ TF L+ KAG
Sbjct: 138 MVLCGIAPQTYTFNLLIRALCDSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGL 197
Query: 748 LKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ L M G PN V T+
Sbjct: 198 TDKGLELLNAMESFGVLPNKVIYNTI 223
>sp|Q9CAN6|PPR97_ARATH Pentatricopeptide repeat-containing protein At1g63070,
mitochondrial OS=Arabidopsis thaliana GN=At1g63070 PE=1
SV=1
Length = 590
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 110/403 (27%), Positives = 205/403 (50%), Gaps = 20/403 (4%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y + T + + C + E +L++ M E D+ TF L+ + K A+
Sbjct: 141 YGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAV 200
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPG 199
+++ M G Y +V+ L ++ + LA+++L N + +E+
Sbjct: 201 ALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLL---------NKMEKGKIEA--D 249
Query: 200 CVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNI---CIHAFGCWGDLHTSL 256
V N ++ L K + +F ++ E K + D++ YN C+ +G W D +
Sbjct: 250 VVIYNTIIDGLCKYKHMDDAFDLFNKM-ETKGIKPDVFTYNPLISCLCNYGRWSD---AS 305
Query: 257 RLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGH-EPNEFTHRIIIQG 315
RL +M EK + PDL +N+LI GK+ +A +++E+ S H P+ + +I+G
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTS 375
CK R+++ M++F EM GL+ +TV Y +L++G F++R A +F++MV DGV
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVE 435
T+NIL+DGL NG E A +F ++K+ +D +T++ ++ LC+ G++E+ L
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485
Query: 436 EMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIR-DGNL 477
+ +G ++VT ++++ GF + G + + L ++ DG L
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPL 528
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/522 (23%), Positives = 222/522 (42%), Gaps = 40/522 (7%)
Query: 252 LHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRI 311
L ++ LF +M + P + ++ L+ + + K + + E+++ G N +T+ I
Sbjct: 56 LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115
Query: 312 IIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDG 371
I C+ ++ A+ I +M G P V NSLLNG ++ EA L ++MV+ G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175
Query: 372 VRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEAL 431
+ T L+ GLF++ +A A L + KG D +T+ V+ LC+ G+ + AL
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235
Query: 432 RLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEAT 491
L+ +ME D+V ++++ G KY D L + + DV + +
Sbjct: 236 NLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCL 295
Query: 492 MKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWS 551
+ D S ++S + N+ D + DA + +L ++
Sbjct: 296 CN------------YGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAE--- 340
Query: 552 SSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLAC 611
KL D++ H D+ NT + F ++
Sbjct: 341 ------KLYDEMVKSKHCFP------------------DVVAYNTLIKGFCKYKRVEEGM 376
Query: 612 KLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGL 671
++F + G+ TY +++ F + + A V +M DI TYN+++ GL
Sbjct: 377 EVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGL 436
Query: 672 GKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPD 731
G + A + + + K+ LD+V Y T+I L KAG+ ++ LF + G+ P+
Sbjct: 437 CNNGNVETALVVFEYMQKRDMK-LDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPN 495
Query: 732 VVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
VVT+ T++ + G +EA M + G PN T TL
Sbjct: 496 VVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTL 537
Score = 136 bits (343), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 121/511 (23%), Positives = 226/511 (44%), Gaps = 24/511 (4%)
Query: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQG 315
+ L ++M+ G+ +L+TY+ I C ++ AL + ++ G+ P+ T ++ G
Sbjct: 95 ISLGEQMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNG 154
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTS 375
C R+ +A+ + +M G PDTV + +L++G+F+ K EA L E+MV G +
Sbjct: 155 FCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPD 214
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVE 435
T+ +I+GL + G + A L ++K D + ++ ++ LC+ +++A L
Sbjct: 215 LVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFN 274
Query: 436 EMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSR 495
+ME +G D+ T + L+ YGRW RL+ + + N+ D++ + A ++A +K
Sbjct: 275 KMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEG 334
Query: 496 K--SKRKDYTPMFPYKGDLSEIM---SLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEW 550
K K Y M K +++ +LI G + + N+ +
Sbjct: 335 KLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTY 394
Query: 551 SSSPYMDKLADQVKSDCHSSQLF---SLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKL 607
++ + A DC ++Q+ ++ G+ DI N L G +
Sbjct: 395 TTLIHGFFQA----RDCDNAQMVFKQMVSDGVHP--------DIMTYNILLDGLCNNGNV 442
Query: 608 NLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVV 667
A +FE + TY +M+ + K G W + + K ++ TY +
Sbjct: 443 ETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTM 502
Query: 668 IQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSG 727
+ G + G + A + + MK+ G + YNTLI + G + L ++MR+ G
Sbjct: 503 MSGFCRKGLKEEADALFVE-MKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCG 561
Query: 728 INPDVVTFNTLIEVNGKAGRLKEAHYFLKMM 758
D TF L+ GRL ++ FL M+
Sbjct: 562 FAGDASTFG-LVTNMLHDGRLDKS--FLDML 589
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 92/378 (24%), Positives = 174/378 (46%), Gaps = 12/378 (3%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY + +C+ G + +LLN M++ + D + +++ K +D A ++ + M
Sbjct: 217 TYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKM 276
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
E G Y+ ++ L + A +L +LE N N P V N
Sbjct: 277 ETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEK-NIN----------PDLVFFNA 325
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
L+ A K + E +++++ + + K D+ YN I F + + + +F+EM ++
Sbjct: 326 LIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQR 385
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
GLV + TY +LI +A +V++++ G P+ T+ I++ G C + ++ A
Sbjct: 386 GLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETA 445
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDG 385
+ +F MQ + D V Y +++ + K+ KV + LF + GV+ + T+ ++ G
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505
Query: 386 LFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVD 445
R G E A LF ++K+ G + T++ ++ R+G + L++EM GF D
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565
Query: 446 LVTISSLLIGFHKYGRWD 463
T + H GR D
Sbjct: 566 ASTFGLVTNMLHD-GRLD 582
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 127/524 (24%), Positives = 239/524 (45%), Gaps = 15/524 (2%)
Query: 197 LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSL 256
P V ++LL A+ K ++ + E++ + ++Y Y+I I+ F L +L
Sbjct: 72 FPSIVEFSKLLSAIAKMNKFDLVISLGEQM-QNLGISHNLYTYSIFINYFCRRSQLSLAL 130
Query: 257 RLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGC 316
+ +M + G P + T NSL+ C ++ +A+ + +++ G++P+ T ++ G
Sbjct: 131 AILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGL 190
Query: 317 CKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSC 376
+ + +A+ + M G PD V Y +++NG+ K + A L KM + +
Sbjct: 191 FQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADV 250
Query: 377 WTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEE 436
+N +IDGL + + A+ LF ++ KG D T++ ++ LC G+ +A RL+ +
Sbjct: 251 VIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSD 310
Query: 437 MEGRGFVVDLVTISSLLIGFHKYGRWDFTERLM-KHIRDGNLVLDVLKWKADVEATMKSR 495
M + DLV ++L+ F K G+ E+L + ++ + DV+ + ++ K +
Sbjct: 311 MLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYK 370
Query: 496 KSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKD-EGSQLTNSDEWSSSP 554
+ + M ++ ++S+ L+G+T T L G A+D + +Q+ S
Sbjct: 371 RVEEG----MEVFR-EMSQ-RGLVGNT--VTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 422
Query: 555 YMDKLADQVKSD--CHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACK 612
+ D + + D C++ + + K DI T + GK+
Sbjct: 423 HPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWD 482
Query: 613 LFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLG 672
LF + GV P TY +MMS F +KG +A + EM E + TYN +I+
Sbjct: 483 LFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542
Query: 673 KMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEA 716
+ G + AS L K M+ G D + + N+L GR D++
Sbjct: 543 RDGD-EAASAELIKEMRSCGFAGDASTFGLVTNML-HDGRLDKS 584
Score = 95.1 bits (235), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 113/489 (23%), Positives = 205/489 (41%), Gaps = 56/489 (11%)
Query: 292 IVWEE--LKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLN 349
+ WE S + E R ++Q ++DDA+ +F +M + P V ++ LL+
Sbjct: 28 LCWERSFAGASSDDCRENLSRKVLQ----DLKLDDAIGLFGDMVKSRPFPSIVEFSKLLS 83
Query: 350 GMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFV 409
+ K K L E+M G+ +HN+
Sbjct: 84 AIAKMNKFDLVISLGEQMQNLGI-----SHNLY--------------------------- 111
Query: 410 DGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLM 469
T+SI + CR Q+ AL ++ +M G+ +VT++SLL GF R L+
Sbjct: 112 ---TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALV 168
Query: 470 KHIRDGNLVLDVLKWKADVEATMKSRK-SKRKDYTPMFPYKG---DLSEIMSLIGSTNLE 525
+ + D + + V + K S+ KG DL ++I
Sbjct: 169 DQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKR 228
Query: 526 TDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKG 585
+ +L + ++G +D + +D L D + LF+ +++ KG
Sbjct: 229 GEPDLALNLLNKMEKGK--IEADVVIYNTIIDGLCKYKHMD-DAFDLFN-----KMETKG 280
Query: 586 MGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQA 645
+ D+ N +S G+ + A +L + ++P +N+++ +FVK+G +A
Sbjct: 281 IKP-DVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339
Query: 646 WGVLNEM-GEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLI 704
+ +EM K C D+ YN +I+G K R + + + M Q G + V Y TLI
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVF-REMSQRGLVGNTVTYTTLI 398
Query: 705 NVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCT 764
+ +A D A M+F+QM + G++PD++T+N L++ G ++ A + M
Sbjct: 399 HGFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMK 458
Query: 765 PNHVTDTTL 773
+ VT TT+
Sbjct: 459 LDIVTYTTM 467
Score = 36.2 bits (82), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 72 WCS-SLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCI 130
+CS SL+ + K TY+ + CR G EE +L M+ED + +S T+ L+ +
Sbjct: 484 FCSLSLKGV-KPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARL 542
Query: 131 KSGKIDFAIEILDYMEELG 149
+ G + E++ M G
Sbjct: 543 RDGDEAASAELIKEMRSCG 561
>sp|Q940A6|PP325_ARATH Pentatricopeptide repeat-containing protein At4g19440,
chloroplastic OS=Arabidopsis thaliana GN=At4g19440 PE=2
SV=2
Length = 838
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 146/598 (24%), Positives = 258/598 (43%), Gaps = 59/598 (9%)
Query: 197 LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSL 256
P CN LL +L +++ + + F+ + K D+Y + I+AF G + ++
Sbjct: 236 FPSKTTCNILLTSLVRANEFQKCCEAFDVV--CKGVSPDVYLFTTAINAFCKGGKVEEAV 293
Query: 257 RLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGC 316
+LF +M+E G+ P++ T+N++I L + G+ +A + E++ G EP T+ I+++G
Sbjct: 294 KLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGL 353
Query: 317 CKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSC 376
++ R+ DA + EM G P+ +VYN+L++ ++ + +A ++ + MV G+ +
Sbjct: 354 TRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTS 413
Query: 377 WTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEE 436
T+N LI G +NG+A+ A L ++ G V+ +F+ V+ LC + ALR V E
Sbjct: 414 STYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGE 473
Query: 437 MEGR-----------------------------------GFVVDLVTISSLLIGFHKYGR 461
M R GFVVD T ++LL G + G+
Sbjct: 474 MLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGK 533
Query: 462 WDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMF-------PYKGDLSE 514
D R+ K I V+D + + + +K D MF K D
Sbjct: 534 LDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL---DEAFMFLDEMVKRGLKPDNYT 590
Query: 515 IMSLI-GSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLF 573
LI G N+ D K G D ++ S +D +++ + F
Sbjct: 591 YSILICGLFNMNKVEEAIQFWDDCKRNGML---PDVYTYSVMIDGCCKAERTE-EGQEFF 646
Query: 574 SLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMM 633
VQ + + N + + G+L++A +L E G+ P + TY S++
Sbjct: 647 DEMMSKNVQPNTV------VYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLI 700
Query: 634 SSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGG 693
+A + EM + ++ Y +I G GK+G+ +L + M
Sbjct: 701 KGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLRE-MHSKNV 759
Query: 694 YLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEA 751
+ + + Y +I + G EA+ L +MR GI PD +T+ I K G + EA
Sbjct: 760 HPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817
Score = 142 bits (358), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 129/528 (24%), Positives = 235/528 (44%), Gaps = 48/528 (9%)
Query: 247 GCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNE 306
GC+ +L +F + KG+ P T N L+ L + + ++ + G P+
Sbjct: 219 GCY----LALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQKCCEAFD-VVCKGVSPDV 273
Query: 307 FTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEK 366
+ I CK ++++A+K+FS+M+ G+ P+ V +N++++G+ + EA EK
Sbjct: 274 YLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEK 333
Query: 367 MVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQ 426
MV+ G+ + T++IL+ GL R R AY + ++ KKG + I ++ ++ G
Sbjct: 334 MVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGS 393
Query: 427 IEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKA 486
+ +A+ + + M +G + T ++L+ G+ K G+ D ERL+K ++L
Sbjct: 394 LNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLK---------EMLSIGF 444
Query: 487 DVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTN 546
+V +G + ++ L+ S + A GE ++
Sbjct: 445 NVN-------------------QGSFTSVICLLCSHLMFDSALRFVGEMLLRN------- 478
Query: 547 SDEWSSSPYMDKLADQVKSDC-HSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKG 605
SP L + C H +L + KG D N L G
Sbjct: 479 -----MSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGF-VVDTRTSNALLHGLCEAG 532
Query: 606 KLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYN 665
KL+ A ++ + G +YN+++S K ++A+ L+EM ++ D TY+
Sbjct: 533 KLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYS 592
Query: 666 VVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRT 725
++I GL M + + A D K+ G DV Y+ +I+ KA R +E F++M +
Sbjct: 593 ILICGLFNMNKVEEAIQFWDDC-KRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMS 651
Query: 726 SGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ P+ V +N LI ++GRL A + M G +PN T T+L
Sbjct: 652 KNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSL 699
Score = 132 bits (332), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/408 (24%), Positives = 191/408 (46%), Gaps = 12/408 (2%)
Query: 83 TACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEIL 142
T TYS + + + RA + + +L M + + + L++ I++G ++ AIEI
Sbjct: 342 TLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIK 401
Query: 143 DYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVA 202
D M G SL+ + Y++++ + Q A +L ++L + N S + C+
Sbjct: 402 DLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLLKEML-SIGFNVNQGSFTSVI--CLL 458
Query: 203 CNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEM 262
C+ L+ S R + + + + +C H G +L L+ +
Sbjct: 459 CSHLMF---DSALRFVGEMLLRNMSPGGGLLTTLIS-GLCKH-----GKHSKALELWFQF 509
Query: 263 KEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRM 322
KG V D T N+L+ LC GK+ +A + +E+ G G + ++ +I GCC ++
Sbjct: 510 LNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKL 569
Query: 323 DDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNIL 382
D+A EM GL PD Y+ L+ G+F KV EA Q ++ ++G+ +T++++
Sbjct: 570 DEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVM 629
Query: 383 IDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGF 442
IDG + R E F ++ K + + ++ ++ CR G++ AL L E+M+ +G
Sbjct: 630 IDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGI 689
Query: 443 VVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEA 490
+ T +SL+ G R + + L + +R L +V + A ++
Sbjct: 690 SPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDG 737
Score = 122 bits (305), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 106/424 (25%), Positives = 185/424 (43%), Gaps = 69/424 (16%)
Query: 83 TACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEIL 142
T+ TY+ + + C+ G + LL M V+ +F ++ C+ + F +
Sbjct: 412 TSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVI--CLLCSHLMFDSALR 469
Query: 143 DYMEELGTSLSPN--VYDSVLVSLVRKKQLGLAMSILFKLLEA--CNDNTADNSVVESLP 198
E L ++SP + +++ L + + A+ + F+ L D N+++ L
Sbjct: 470 FVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL- 528
Query: 199 GCVACNELLVALRKSDRRSEFKQVFERLKEQKEF-----EFDIYGYNICIHAFGCWGD-- 251
E ++ E + QKE D YN I GC G
Sbjct: 529 ------------------CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLIS--GCCGKKK 568
Query: 252 LHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRI 311
L + EM ++GL PD +TY+ LI L + KV++A+ W++ K +G P+ +T+ +
Sbjct: 569 LDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSV 628
Query: 312 IIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDG 371
+I GCCK+ R ++ + F EM + P+TVVYN L+ +S ++ A +L E M G
Sbjct: 629 MIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKG 688
Query: 372 VRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKG---------KFVDG----------- 411
+ + T+ LI G+ R E A LF +++ +G +DG
Sbjct: 689 ISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVE 748
Query: 412 ---------------ITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGF 456
IT+++++ R+G + EA RL+ EM +G V D +T + G+
Sbjct: 749 CLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGY 808
Query: 457 HKYG 460
K G
Sbjct: 809 LKQG 812
Score = 107 bits (268), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 123/598 (20%), Positives = 238/598 (39%), Gaps = 70/598 (11%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
++ C+ G +EE L + M+E V + TF +++ G+ D A + M
Sbjct: 276 FTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVIDGLGMCGRYDEAFMFKEKMV 335
Query: 147 ELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNEL 206
E G + Y ++ L R K++G A +L ++
Sbjct: 336 ERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEM-------------------------- 369
Query: 207 LVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKG 266
+K F ++ YN I +F G L+ ++ + M KG
Sbjct: 370 ---------------------TKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKG 408
Query: 267 LVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAM 326
L TYN+LI+ C G+ +A + +E+ G N+ + +I C D A+
Sbjct: 409 LSLTSSTYNTLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSAL 468
Query: 327 KIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGL 386
+ EM + P + +L++G+ K K +A +L+ + + G T N L+ GL
Sbjct: 469 RFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGL 528
Query: 387 FRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDL 446
G+ + A+ + ++ +G +D ++++ ++ C + +++EA ++EM RG D
Sbjct: 529 CEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDN 588
Query: 447 VTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMF 506
T S L+ G + + + + ++ DV + ++ K+ +++
Sbjct: 589 YTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQ----- 643
Query: 507 PYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSD 566
E + S N++ + + + A +L+ + E M S
Sbjct: 644 -------EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELRED--MKHKGISPNSA 694
Query: 567 CHSSQLFSLARGLRVQGKGMGTFDIDM------VNTFLSIFLAKGKLNLACKLFEIFTDM 620
++S + ++ RV+ + ++ M V + ++ GKL K+ + +M
Sbjct: 695 TYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREM 754
Query: 621 ---GVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMG 675
VHP TY M+ + + G +A +LNEM EK D TY I G K G
Sbjct: 755 HSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQG 812
Score = 100 bits (249), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 153/346 (44%), Gaps = 18/346 (5%)
Query: 94 VCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLS 153
+C+ G + L VVD+ T LL ++GK+D A I + G +
Sbjct: 493 LCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMD 552
Query: 154 PNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESL-PGCVACNELLVALRK 212
Y++++ KK+L A L D V L P + L+ L
Sbjct: 553 RVSYNTLISGCCGKKKLDEAFMFL------------DEMVKRGLKPDNYTYSILICGLFN 600
Query: 213 SDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTS--LRLFKEMKEKGLVPD 270
++ E Q ++ K D+Y Y++ I GC T F EM K + P+
Sbjct: 601 MNKVEEAIQFWDDCKRNGMLP-DVYTYSVMID--GCCKAERTEEGQEFFDEMMSKNVQPN 657
Query: 271 LHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFS 330
YN LI+ C G++ AL + E++K G PN T+ +I+G R+++A +F
Sbjct: 658 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 717
Query: 331 EMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNG 390
EM+ GL P+ Y +L++G K ++++ L +M V + T+ ++I G R+G
Sbjct: 718 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 777
Query: 391 RAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEE 436
A L ++++KG D IT+ + ++G + EA + +E
Sbjct: 778 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 823
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 76/158 (48%), Gaps = 4/158 (2%)
Query: 615 EIFTDM---GVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGL 671
E F +M V P YN ++ ++ + G + A + +M K + ATY +I+G+
Sbjct: 644 EFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGM 703
Query: 672 GKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPD 731
+ R + A + ++ M+ G +V Y LI+ GK G+ + L +M + ++P+
Sbjct: 704 SIISRVEEAKLLFEE-MRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPN 762
Query: 732 VVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
+T+ +I + G + EA L M + G P+ +T
Sbjct: 763 KITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSIT 800
Score = 56.6 bits (135), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/255 (21%), Positives = 109/255 (42%), Gaps = 16/255 (6%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TYS + + +EE + + + ++ D T+ ++++ C K+ + + E D M
Sbjct: 590 TYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEM 649
Query: 146 EELGTSLSPN--VYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
+ ++ PN VY+ ++ + R +L +A+ + ++ + P
Sbjct: 650 --MSKNVQPNTVVYNHLIRAYCRSGRLSMALEL--------REDMKHKGIS---PNSATY 696
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
L+ + R E K +FE ++ + E +++ Y I +G G + L +EM
Sbjct: 697 TSLIKGMSIISRVEEAKLLFEEMRMEG-LEPNVFHYTALIDGYGKLGQMVKVECLLREMH 755
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
K + P+ TY +I G V +A + E++ G P+ T++ I G K +
Sbjct: 756 SKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVL 815
Query: 324 DAMKIFSEMQYNGLI 338
+A K E Y +I
Sbjct: 816 EAFKGSDEENYAAII 830
>sp|P0C7Q7|PPR38_ARATH Putative pentatricopeptide repeat-containing protein At1g12700,
mitochondrial OS=Arabidopsis thaliana GN=At1g12700 PE=3
SV=1
Length = 602
Score = 160 bits (404), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 128/519 (24%), Positives = 235/519 (45%), Gaps = 41/519 (7%)
Query: 255 SLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQ 314
++ LF+EM +P L ++ + + L ++L+ +G N +T I+I
Sbjct: 72 AIALFQEMIRSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMIN 131
Query: 315 GCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRT 374
C+ + A + ++ G PDT +N+L+ G+F KV EA L ++MV++G +
Sbjct: 132 CFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQP 191
Query: 375 SCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLV 434
T+N +++G+ R+G A L ++++ D T+S ++ LCR+G I+ A+ L
Sbjct: 192 DVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLF 251
Query: 435 EEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKS 494
+EME +G +VT +SL+ G K G+W+ L+K + +V +V+ + ++ +K
Sbjct: 252 KEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKE 311
Query: 495 RKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSP 554
K + + YK E+++ S N+ T L G
Sbjct: 312 GKLQEANEL----YK----EMITRGISPNIITYNTLMDGY-------------------- 343
Query: 555 YMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLF 614
C ++L L + + + DI + + + +++ K+F
Sbjct: 344 ------------CMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVF 391
Query: 615 EIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKM 674
+ G+ TY+ ++ F + G A + EM D+ TY +++ GL
Sbjct: 392 RNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDN 451
Query: 675 GRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVT 734
G+ + A I + L K L +VMY T+I + K G+ ++A LF + G+ P+V+T
Sbjct: 452 GKLEKALEIFEDLQKSKMD-LGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMT 510
Query: 735 FNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ +I K G L EA+ L+ M + G PN T TL
Sbjct: 511 YTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTL 549
Score = 146 bits (368), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 97/388 (25%), Positives = 190/388 (48%), Gaps = 12/388 (3%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ I +CR+G LL M+E +V D T+ +++ + G ID AI + M
Sbjct: 195 TYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 254
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
E G S Y+S++ L + + +L ++ E +P + N
Sbjct: 255 ETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSR-----------EIVPNVITFNV 303
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
LL K + E ++++ + + +I YN + + L + + M
Sbjct: 304 LLDVFVKEGKLQEANELYKEMI-TRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRN 362
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
PD+ T+ SLI+ C+V +V D + V+ + G N T+ I++QG C+S ++ A
Sbjct: 363 KCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLA 422
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDG 385
++F EM +G++PD + Y LL+G+ + K+ +A ++FE + + + + +I+G
Sbjct: 423 EELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEG 482
Query: 386 LFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVD 445
+ + G+ E A+ LFC L KG + +T+++++ LC++G + EA L+ +ME G +
Sbjct: 483 MCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPN 542
Query: 446 LVTISSLLIGFHKYGRWDFTERLMKHIR 473
T ++L+ + G + +L++ ++
Sbjct: 543 DCTYNTLIRAHLRDGDLTASAKLIEEMK 570
Score = 144 bits (362), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 104/398 (26%), Positives = 200/398 (50%), Gaps = 13/398 (3%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y+ T++ + + + G + E L++ M E+ D T+ ++ +SG A+
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPG 199
++L MEE Y +++ SL R + A+S LFK +E +SVV
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAIS-LFKEMET---KGIKSSVVTY--- 266
Query: 200 CVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLF 259
N L+ L K+ + ++ + + + +E ++ +N+ + F G L + L+
Sbjct: 267 ----NSLVRGLCKAGKWNDGALLLKDMV-SREIVPNVITFNVLLDVFVKEGKLQEANELY 321
Query: 260 KEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS 319
KEM +G+ P++ TYN+L+ C+ ++ +A + + + + P+ T +I+G C
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381
Query: 320 YRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTH 379
R+DD MK+F + GL+ + V Y+ L+ G +S K+ A +LF++MV GV T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441
Query: 380 NILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEG 439
IL+DGL NG+ E A +F DL+K + + ++ ++ +C+ G++E+A L +
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501
Query: 440 RGFVVDLVTISSLLIGFHKYGRWDFTERLMKHI-RDGN 476
+G +++T + ++ G K G L++ + DGN
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGN 539
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 95/435 (21%), Positives = 202/435 (46%), Gaps = 19/435 (4%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
+S F + R V ++ + + + T +++ + K FA +L +
Sbjct: 91 FSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVM 150
Query: 147 ELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLE-ACNDNTADNSVVESLPGCVACNE 205
+LG +++++ L + ++ A+ ++ +++E C P V N
Sbjct: 151 KLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQ------------PDVVTYNS 198
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
++ + +S S + ++ E++ + D++ Y+ I + G + ++ LFKEM+ K
Sbjct: 199 IVNGICRSGDTSLALDLLRKM-EERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETK 257
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
G+ + TYNSL++ LC GK D ++ +++ PN T +++ K ++ +A
Sbjct: 258 GIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEA 317
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDG 385
+++ EM G+ P+ + YN+L++G ++ EA + + MV++ T LI G
Sbjct: 318 NELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKG 377
Query: 386 LFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVD 445
R + +F ++ K+G + +T+SI+V C+ G+I+ A L +EM G + D
Sbjct: 378 YCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPD 437
Query: 446 LVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPM 505
++T LL G G+ + + + ++ + L ++ + +E K K +D +
Sbjct: 438 VMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKG--GKVEDAWNL 495
Query: 506 F---PYKGDLSEIMS 517
F P KG +M+
Sbjct: 496 FCSLPCKGVKPNVMT 510
Score = 118 bits (296), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/487 (23%), Positives = 212/487 (43%), Gaps = 46/487 (9%)
Query: 232 FEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDAL 291
+E D +N I G + ++ L M E G PD+ TYNS++ +C G AL
Sbjct: 154 YEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLAL 213
Query: 292 IVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGM 351
+ +++ + + FT+ II C+ +D A+ +F EM+ G+ V YNSL+ G+
Sbjct: 214 DLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGL 273
Query: 352 FKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDG 411
K+ K + L + MV + + T N+L+D + G+ + A L+ ++ +G +
Sbjct: 274 CKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNI 333
Query: 412 ITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKH 471
IT++ ++ C + ++ EA +++ M D+VT +SL+ G+ R D ++ ++
Sbjct: 334 ITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRN 393
Query: 472 IRDGNLVLDVLKWKADVEATMKSRKSKRKD--YTPMFPYKGDLSEIMSLIGSTNLETDAN 529
I LV + + + V+ +S K K + + M + G L ++M+
Sbjct: 394 ISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSH-GVLPDVMTY----------- 441
Query: 530 LGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTF 589
+D L D K + + + L+ +G
Sbjct: 442 -----------------------GILLDGLCDNGKLE----KALEIFEDLQKSKMDLG-- 472
Query: 590 DIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVL 649
I M T + GK+ A LF GV P TY M+S KKG ++A +L
Sbjct: 473 -IVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILL 531
Query: 650 NEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGK 709
+M E + TYN +I+ + G ++ ++++ MK G D +I++L
Sbjct: 532 RKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEE-MKSCGFSADASSIKMVIDML-L 589
Query: 710 AGRFDEA 716
+G D++
Sbjct: 590 SGELDKS 596
Score = 33.5 bits (75), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Query: 73 CSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKS 132
C ++P TY+ + +C+ G L E LL M+ED + T+ L+ ++
Sbjct: 501 CKGVKP----NVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRD 556
Query: 133 GKIDFAIEILDYMEELGTS 151
G + + ++++ M+ G S
Sbjct: 557 GDLTASAKLIEEMKSCGFS 575
>sp|Q0WVK7|PPR12_ARATH Pentatricopeptide repeat-containing protein At1g05670,
mitochondrial OS=Arabidopsis thaliana GN=At1g05670 PE=2
SV=1
Length = 741
Score = 160 bits (404), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 169/710 (23%), Positives = 290/710 (40%), Gaps = 69/710 (9%)
Query: 38 RNLDPRSIPISEPLVLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRA 97
R+L P ++ VL K D LDFF W S R + C H+ +
Sbjct: 76 RSLKPYECKFKTDHLIWVLMKIKCDYRLVLDFFDWARSRRDSNLESLCIVIHL---AVAS 132
Query: 98 GFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVY 157
L+ SL++S E + +++F + + + K + G+ P V+
Sbjct: 133 KDLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYK------------DWGSD--PRVF 178
Query: 158 DSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRS 217
D LV L A + K+L + +V S+ +CN L L K ++
Sbjct: 179 DVFFQVLVDFGLLREARRVFEKML--------NYGLVLSVD---SCNVYLTRLSKDCYKT 227
Query: 218 EFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSL 277
+ R + +++ YNI IH G + + L M+ KG PD+ +Y+++
Sbjct: 228 ATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTV 287
Query: 278 IQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGL 337
+ C G++ + E +K G +PN + + II C+ ++ +A + FSEM G+
Sbjct: 288 VNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGI 347
Query: 338 IPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYT 397
+PDTVVY +L++G K + A + F +M + T+ +I G + G A
Sbjct: 348 LPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGK 407
Query: 398 LFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFH 457
LF ++ KG D +TF+ ++ C+ G +++A R+ M G ++VT ++L+ G
Sbjct: 408 LFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLC 467
Query: 458 KYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMS 517
K G D L+ + L ++ + + V KS G++ E +
Sbjct: 468 KEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS---------------GNIEEAVK 512
Query: 518 LIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLAR 577
L+G G D + T D + S MDK + +K
Sbjct: 513 LVGEF---------EAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKE------------ 551
Query: 578 GLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFV 637
+ GKG+ I N ++ F G L KL G+ P T+NS++ +
Sbjct: 552 ---MLGKGLQP-TIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYC 607
Query: 638 KKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDV 697
+ A + +M + D TY +++G K R + L + MK G + V
Sbjct: 608 IRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCK-ARNMKEAWFLFQEMKGKGFSVSV 666
Query: 698 VMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGR 747
Y+ LI K +F EA +F+QMR G+ D F+ + K R
Sbjct: 667 STYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTKYKGKR 716
Score = 114 bits (286), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 100/416 (24%), Positives = 187/416 (44%), Gaps = 42/416 (10%)
Query: 359 EACQLFEKMVQDGVRTSCWTHNILIDGLFRNG-RAEAAYTLFCDLKKKGKFVDGITFSIV 417
EA ++FEKM+ G+ S + N+ + L ++ + A +F + + G + +++IV
Sbjct: 193 EARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNIV 252
Query: 418 VLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNL 477
+ +C+ G+I+EA L+ ME +G+ D+++ S+++ G+ ++G D +L++ +
Sbjct: 253 IHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVM----- 307
Query: 478 VLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDA 537
KRK P G + ++ I +A
Sbjct: 308 --------------------KRKGLKPNSYIYGSIIGLLCRICKL------------AEA 335
Query: 538 KDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTF 597
++ S++ + L D C + + ++ T D+
Sbjct: 336 EEAFSEMIRQGILPDTVVYTTLIDGF---CKRGDIRAASKFFYEMHSRDITPDVLTYTAI 392
Query: 598 LSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFC 657
+S F G + A KLF G+ P + T+ +++ + K G+ A+ V N M + C
Sbjct: 393 ISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGC 452
Query: 658 PTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEAN 717
++ TY +I GL K G D A+ +L ++ K G ++ YN+++N L K+G +EA
Sbjct: 453 SPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQ-PNIFTYNSIVNGLCKSGNIEEAV 511
Query: 718 MLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
L + +G+N D VT+ TL++ K+G + +A LK ML G P VT L
Sbjct: 512 KLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVL 567
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 133/593 (22%), Positives = 234/593 (39%), Gaps = 75/593 (12%)
Query: 219 FKQVFERL-KEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSL 277
F Q F+ L K++ D +++ +G L + R+F++M GLV + + N
Sbjct: 157 FVQFFDLLVYTYKDWGSDPRVFDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVY 216
Query: 278 IQVL---CVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQY 334
+ L C K A+IV+ E G N ++ I+I C+ R+ +A + M+
Sbjct: 217 LTRLSKDCY--KTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMEL 274
Query: 335 NGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEA 394
G PD + Y++++N G R G +
Sbjct: 275 KGYTPDVISYSTVVN-----------------------------------GYCRFGELDK 299
Query: 395 AYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLI 454
+ L +K+KG + + ++ LCR ++ EA EM +G + D V ++L+
Sbjct: 300 VWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLID 359
Query: 455 GFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSE 514
GF K G + + ++ DVL + A + F GD+ E
Sbjct: 360 GFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISG---------------FCQIGDMVE 404
Query: 515 IMSLIGS---TNLETDA-------NLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVK 564
L LE D+ N G KD + + SP + +
Sbjct: 405 AGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLID 464
Query: 565 SDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHP 624
C L S L K +I N+ ++ G + A KL F G++
Sbjct: 465 GLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNA 524
Query: 625 VNYTYNSMMSSFVKKGYFNQAWGVLNEM-GEKFCPTDIATYNVVIQGLGKMGRADLASTI 683
TY ++M ++ K G ++A +L EM G+ PT I T+NV++ G G + +
Sbjct: 525 DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPT-IVTFNVLMNGFCLHGMLEDGEKL 583
Query: 684 LDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNG 743
L+ ++ +G + +N+L+ A +++ M + G+ PD T+ L++ +
Sbjct: 584 LNWMLAKGIA-PNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHC 642
Query: 744 KAGRLKEAHYFLKMMLDSGCTPNHVTDTTL--DFLGR----EIDRLKDQNRNQ 790
KA +KEA + + M G + + T + L FL R E + DQ R +
Sbjct: 643 KARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRRE 695
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 160/346 (46%), Gaps = 41/346 (11%)
Query: 72 WCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIK 131
+C L P + T++ + C+AG +++ + N M + + T+ L++ K
Sbjct: 413 FCKGLEP----DSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCK 468
Query: 132 SGKIDFAIEILDYMEELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTA 189
G +D A E+L M ++G L PN+ Y+S++ L + + A+ ++ + EA N A
Sbjct: 469 EGDLDSANELLHEMWKIG--LQPNIFTYNSIVNGLCKSGNIEEAVKLVGEF-EAAGLN-A 524
Query: 190 DNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQ--KEFEFDIYGYNICIHAFG 247
D V L+ A KS E + E LKE K + I +N+ ++ F
Sbjct: 525 DT---------VTYTTLMDAYCKS---GEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFC 572
Query: 248 CWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEF 307
G L +L M KG+ P+ T+NSL++ C+ +K A +++++ G P+
Sbjct: 573 LHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGK 632
Query: 308 THRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKM 367
T+ +++G CK+ M +A +F EM+ G Y+ L+ G K +K +EA ++F++M
Sbjct: 633 TYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQM 692
Query: 368 VQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGIT 413
++G+ + + F D K KGK D I
Sbjct: 693 RREGLAAD-----------------KEIFDFFSDTKYKGKRPDTIV 721
Score = 53.9 bits (128), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 77/184 (41%), Gaps = 9/184 (4%)
Query: 590 DIDMVNTFLSIFLAKGKLNLACKLFEIF-------TDMGVHPVNYTYNSMMSSFVKKGYF 642
D+ + + +S F + KLN+ + F D G P ++ V G
Sbjct: 134 DLKVAQSLISSFWERPKLNVTDSFVQFFDLLVYTYKDWGSDP--RVFDVFFQVLVDFGLL 191
Query: 643 NQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNT 702
+A V +M + + NV + L K + I+ + + G +V YN
Sbjct: 192 REARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTATAIIVFREFPEVGVCWNVASYNI 251
Query: 703 LINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSG 762
+I+ + + GR EA+ L M G PDV++++T++ + G L + +++M G
Sbjct: 252 VIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKRKG 311
Query: 763 CTPN 766
PN
Sbjct: 312 LKPN 315
>sp|Q9M9X9|PPR18_ARATH Pentatricopeptide repeat-containing protein At1g06710,
mitochondrial OS=Arabidopsis thaliana GN=At1g06710 PE=2
SV=1
Length = 987
Score = 159 bits (401), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 175/752 (23%), Positives = 311/752 (41%), Gaps = 94/752 (12%)
Query: 47 ISEPLVLQVLGKNSLDSSKKLDFFRWCSSLRPI-YKHTACTYSHIFRTVCRAGFLEEVPS 105
+SE LV++VL + S + FF W R I YKHTA Y+ + + R E+VP
Sbjct: 130 LSESLVIEVL-RLIARPSAVISFFVWAG--RQIGYKHTAPVYNALVDLIVRDDD-EKVPE 185
Query: 106 -LLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSL 164
L +++DD V E +L+ ++G A+E L +++ S + Y+ ++ +
Sbjct: 186 EFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAF 245
Query: 165 VRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFE 224
++ +L A S++ + + N LR
Sbjct: 246 LKADRLDSA-SLIHREMSLAN------------------------LRMDG---------- 270
Query: 225 RLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVV 284
F + Y++C G W + T + + + VPD Y LI LC
Sbjct: 271 -------FTLRCFAYSLC--KVGKWREALTLV------ETENFVPDTVFYTKLISGLCEA 315
Query: 285 GKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVY 344
++A+ ++ + PN T+ ++ GC ++ ++ + M G P ++
Sbjct: 316 SLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIF 375
Query: 345 NSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGR---------AEAA 395
NSL++ S A +L +KMV+ G +NILI + + AE A
Sbjct: 376 NSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKA 435
Query: 396 YTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIG 455
Y+ ++ G ++ I S LC G+ E+A ++ EM G+GF+ D T S +L
Sbjct: 436 YS---EMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNY 492
Query: 456 FHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSR--KSKRKDYTPMFPYKGDLS 513
+ + L + ++ G LV DV + V++ K+ + RK + M ++
Sbjct: 493 LCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM----REVG 548
Query: 514 EIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLF 573
+++ T L A L + + +E + S+ P + + + C + Q+
Sbjct: 549 CTPNVVTYTAL-IHAYLKAKKVSYANELFETMLSE--GCLPNIVTYSALIDGHCKAGQVE 605
Query: 574 SLARGLRVQGKGMGTFDIDMV----------------NTFLSIFLAKGKLNLACKLFEIF 617
+ D+DM L F ++ A KL +
Sbjct: 606 KACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAM 665
Query: 618 TDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRA 677
+ G P Y++++ K G ++A V EM E P + TY+ +I K+ R
Sbjct: 666 SMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQ 725
Query: 678 DLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNT 737
DLAS +L K+++ +VV+Y +I+ L K G+ DEA L + M G P+VVT+
Sbjct: 726 DLASKVLSKMLENSCA-PNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTA 784
Query: 738 LIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
+I+ G G+++ L+ M G PN+VT
Sbjct: 785 MIDGFGMIGKIETCLELLERMGSKGVAPNYVT 816
Score = 148 bits (374), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 158/708 (22%), Positives = 298/708 (42%), Gaps = 89/708 (12%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
Y+ + +C A EE LN M+ + + T+ LL C+ ++ +L+ M
Sbjct: 305 YTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMM 364
Query: 147 ELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNEL 206
G SP +++S++ + A +L K+++ + +PG V N +
Sbjct: 365 MEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGH-----------MPGYVVYN-I 412
Query: 207 LVALRKSDRRSEFKQVFERLKEQKEFE----------FDIYGYNICIHAFGCWGDLHTSL 256
L+ D+ S + + L E+ E ++ + C+ + G + +
Sbjct: 413 LIGSICGDKDSLNCDLLD-LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKY---EKAF 468
Query: 257 RLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGC 316
+ +EM +G +PD TY+ ++ LC K++ A +++EE+K G + +T+ I++
Sbjct: 469 SVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSF 528
Query: 317 CKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSC 376
CK+ ++ A K F+EM+ G P+ V Y +L++ K++KV A +LFE M+ +G +
Sbjct: 529 CKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNI 588
Query: 377 WTHNILIDGLFRNGRAEAAYTLF---C------DLKKKGKFVDG-------ITFSIVVLQ 420
T++ LIDG + G+ E A +F C D+ K D +T+ ++
Sbjct: 589 VTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDG 648
Query: 421 LCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLD 480
C+ ++EEA +L++ M G + + +L+ G K G+ D + + + +
Sbjct: 649 FCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPAT 708
Query: 481 VLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDE 540
+ + + ++ + K KR+D + S + S LE
Sbjct: 709 LYTYSSLID---RYFKVKRQD-------------LASKVLSKMLEN-------------- 738
Query: 541 GSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSI 600
S +P + + + C + + +++ + ++ +
Sbjct: 739 ----------SCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDG 788
Query: 601 FLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTD 660
F GK+ +L E GV P TY ++ K G + A +L EM + PT
Sbjct: 789 FGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTH 848
Query: 661 IATYNVVIQGLGKMGRADLASTILDKL-MKQGGGYLDVVMYNTLINVLGKAGRFDEANML 719
A Y VI+G K L +LD++ +L V Y LI+ L KA R + A L
Sbjct: 849 TAGYRKVIEGFNKEFIESLG--LLDEIGQDDTAPFLSV--YRLLIDNLIKAQRLEMALRL 904
Query: 720 FEQMRT--SGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTP 765
E++ T + + T+N+LIE A +++ A M G P
Sbjct: 905 LEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIP 952
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 95/392 (24%), Positives = 187/392 (47%), Gaps = 39/392 (9%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TYS + +C A +E L M+ +V D T+ ++++ K+G I+ A + + M
Sbjct: 485 TYSKVLNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEM 544
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLL-EACNDNTADNSVVESLPGCVA 202
E+G + PNV Y +++ + ++ K++ A + +L E C LP V
Sbjct: 545 REVGCT--PNVVTYTALIHAYLKAKKVSYANELFETMLSEGC------------LPNIVT 590
Query: 203 CNELLVALRKSDRRSEFKQVFERLKEQKEF-EFDIYGYNICIHAFGCWGDLHTSLRLFKE 261
+ L+ K+ + + Q+FER+ K+ + D+Y FK+
Sbjct: 591 YSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMY---------------------FKQ 629
Query: 262 MKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYR 321
+ P++ TY +L+ C +V++A + + + G EPN+ + +I G CK +
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689
Query: 322 MDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNI 381
+D+A ++ +EM +G Y+SL++ FK ++ A ++ KM+++ + +
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749
Query: 382 LIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRG 441
+IDGL + G+ + AY L +++KG + +T++ ++ G+IE L L+E M +G
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809
Query: 442 FVVDLVTISSLLIGFHKYGRWDFTERLMKHIR 473
+ VT L+ K G D L++ ++
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMK 841
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/352 (26%), Positives = 166/352 (47%), Gaps = 16/352 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY + C++ +EE LL++M + + + L++ K GK+D A E+ M
Sbjct: 641 TYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEM 700
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
E G + Y S++ + K+ LA +L K+LE NS P V E
Sbjct: 701 SEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLE--------NSCA---PNVVIYTE 749
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
++ L K + E ++ + + E+K + ++ Y I FG G + T L L + M K
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMM-EEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSK 808
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
G+ P+ TY LI C G + A + EE+K + + +R +I+G K + ++
Sbjct: 809 GVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFI--ES 866
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCW--THNILI 383
+ + E+ + P VY L++ + K++++ A +L E++ + T+N LI
Sbjct: 867 LGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLI 926
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVE 435
+ L + E A+ LF ++ KKG + +F ++ L R +I EAL L++
Sbjct: 927 ESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLLD 978
Score = 94.7 bits (234), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 97/409 (23%), Positives = 173/409 (42%), Gaps = 51/409 (12%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + + C+AG +E+ N M+E + T+ L+ +K+ K+ +A E+ + M
Sbjct: 520 TYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETM 579
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKL--------LEACNDNTADNSVVE 195
L PN+ Y +++ + Q+ A I ++ ++ DNS
Sbjct: 580 --LSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNS--- 634
Query: 196 SLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTS 255
P V LL KS R E +++ + + + E + Y+ I G L +
Sbjct: 635 ERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEG-CEPNQIVYDALIDGLCKVGKLDEA 693
Query: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQG 315
+ EM E G L+TY+SLI V + A V ++ + PN + +I G
Sbjct: 694 QEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDG 753
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTS 375
CK + D+A K+ M+ G P+ V Y ++++G K+ +L E+M GV +
Sbjct: 754 LCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPN 813
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKKKG---------KFVDGI-------------- 412
T+ +LID +NG + A+ L ++K+ K ++G
Sbjct: 814 YVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEI 873
Query: 413 ----------TFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISS 451
+ +++ L + ++E ALRL+EE+ F LV SS
Sbjct: 874 GQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVA--TFSATLVDYSS 920
Score = 94.0 bits (232), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 115/498 (23%), Positives = 205/498 (41%), Gaps = 46/498 (9%)
Query: 311 IIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQD 370
++++ C++ A++ ++ P YN L+ K+ ++ A + +M
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264
Query: 371 GVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEA 430
+R +T L + G+ A TL ++ + D + ++ ++ LC EEA
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKWREALTL---VETENFVPDTVFYTKLISGLCEASLFEEA 321
Query: 431 LRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEA 490
+ + M + ++VT S+LL G + +R++ + + + V A
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381
Query: 491 TMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANL--GSGEGDAKDEGSQLTN-- 546
S D++ + YK L + M G N+ GS GD L +
Sbjct: 382 YCTS-----GDHS--YAYK--LLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLA 432
Query: 547 ----SDEWSSSPYMDKLADQVKSDCHSS-----QLFSLARGLRVQGKGMGTFDIDMVNTF 597
S+ ++ ++K+ + C S + FS+ R + QG D +
Sbjct: 433 EKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQG---FIPDTSTYSKV 489
Query: 598 LSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFC 657
L+ K+ LA LFE G+ YTY M+ SF K G QA NEM E C
Sbjct: 490 LNYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGC 549
Query: 658 PTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEAN 717
++ TY +I K + A+ + + ++ + G ++V Y+ LI+ KAG+ ++A
Sbjct: 550 TPNVVTYTALIHAYLKAKKVSYANELFETMLSE-GCLPNIVTYSALIDGHCKAGQVEKAC 608
Query: 718 MLFEQMRTSGINPD----------------VVTFNTLIEVNGKAGRLKEAHYFLKMMLDS 761
+FE+M S PD VVT+ L++ K+ R++EA L M
Sbjct: 609 QIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSME 668
Query: 762 GCTPNHVT-DTTLDFLGR 778
GC PN + D +D L +
Sbjct: 669 GCEPNQIVYDALIDGLCK 686
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 69/151 (45%), Gaps = 10/151 (6%)
Query: 628 TYNSMMSSFVKKGYFNQAWGV-LNEMGE----KFCPTDIATYNVVIQGLGKMGRADLAST 682
+ ++ V+K N ++ + L E+G +F P+ +TYN +IQ K R D AS
Sbjct: 198 VFGEFLNVLVRKHCRNGSFSIALEELGRLKDFRFRPSR-STYNCLIQAFLKADRLDSAS- 255
Query: 683 ILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVN 742
++ + M +D L K G++ EA L E T PD V + LI
Sbjct: 256 LIHREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVE---TENFVPDTVFYTKLISGL 312
Query: 743 GKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+A +EA FL M + C PN VT +TL
Sbjct: 313 CEASLFEEAMDFLNRMRATSCLPNVVTYSTL 343
>sp|Q9LFC5|PP360_ARATH Pentatricopeptide repeat-containing protein At5g01110
OS=Arabidopsis thaliana GN=At5g01110 PE=2 SV=1
Length = 729
Score = 157 bits (397), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 130/554 (23%), Positives = 258/554 (46%), Gaps = 42/554 (7%)
Query: 239 YNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELK 298
+++ I + L + F ++ KG + N+LI L +G V+ A V++E+
Sbjct: 168 FDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEIS 227
Query: 299 GSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVM 358
SG N +T I++ CK +M+ S++Q G+ PD V YN+L++ + S+ +M
Sbjct: 228 RSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISA-YSSKGLM 286
Query: 359 E-ACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIV 417
E A +L M G +T+N +I+GL ++G+ E A +F ++ + G D T+ +
Sbjct: 287 EEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSL 346
Query: 418 VLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNL 477
+++ C++G + E ++ +M R V DLV SS++ F + G D +++ L
Sbjct: 347 LMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGL 406
Query: 478 VLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIG-------STNLETDANL 530
+ D + + ++ + KG +S M+L + ++ T +
Sbjct: 407 IPDNVIYTILIQG---------------YCRKGMISVAMNLRNEMLQQGCAMDVVTYNTI 451
Query: 531 GSGE------GDAKDEGSQLTNSDEWSSSPYMDKLAD---QVKSDCHSSQLFSLARGLRV 581
G G+A +++T + S + L D ++ + ++ +LF + R+
Sbjct: 452 LHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRI 511
Query: 582 QGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGY 641
+ D+ NT L F G ++ A +++ + P +Y+ ++++ KG+
Sbjct: 512 R------LDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGH 565
Query: 642 FNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYN 701
+A+ V +EM K + N +I+G + G A + L+K++ +G D + YN
Sbjct: 566 LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGF-VPDCISYN 624
Query: 702 TLINVLGKAGRFDEANMLFEQMR--TSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMML 759
TLI + +A L ++M G+ PDV T+N+++ + ++KEA L+ M+
Sbjct: 625 TLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMI 684
Query: 760 DSGCTPNHVTDTTL 773
+ G P+ T T +
Sbjct: 685 ERGVNPDRSTYTCM 698
Score = 150 bits (379), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 159/721 (22%), Positives = 305/721 (42%), Gaps = 80/721 (11%)
Query: 34 ESGTRNLDPRSIPISEPLVLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRT 93
+ G N+ I ++ V++VL + D + F P +KHT+ + S +
Sbjct: 63 KQGNNNVRNHLIRLNPLAVVEVLYRCRNDLTLGQRFVDQLGFHFPNFKHTSLSLSAMIHI 122
Query: 94 VCRAGFLEEVPS-LLNSMQEDDV----VVDS------------ETFKLLLEPCIKSGKID 136
+ R+G L + S LL ++ V +V+S F LL+ +++ K+
Sbjct: 123 LVRSGRLSDAQSCLLRMIRRSGVSRLEIVNSLDSTFSNCGSNDSVFDLLIRTYVQARKLR 182
Query: 137 FAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVES 196
A E + G ++S + ++++ SLVR + LA + E N
Sbjct: 183 EAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY---QEISRSGVGIN----- 234
Query: 197 LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSL 256
N ++ AL K + + +++E+ + DI YN I A+ G + +
Sbjct: 235 ---VYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYP-DIVTYNTLISAYSSKGLMEEAF 290
Query: 257 RLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGC 316
L M KG P ++TYN++I LC GK + A V+ E+ SG P+ T+R ++
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350
Query: 317 CKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSC 376
CK + + K+FS+M+ ++PD V ++S+++ +S + +A F + + G+
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410
Query: 377 WTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEE 436
+ ILI G R G A L ++ ++G +D +T++ ++ LC+ + EA +L E
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470
Query: 437 MEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRK 496
M R D T++ L+ G K G L + +++ + LDV+ + ++
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDG------ 524
Query: 497 SKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYM 556
F GD+ AK+ + + + + +
Sbjct: 525 ---------FGKVGDIDT----------------------AKEIWADMVSKEILPTPISY 553
Query: 557 DKLADQVKSDCHSSQLFSLARGLRVQGKGMGTF---DIDMVNTFLSIFLAKGKLNLACKL 613
L + + S H LA RV + + + + N+ + + G +
Sbjct: 554 SILVNALCSKGH------LAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESF 607
Query: 614 FEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEK---FCPTDIATYNVVIQG 670
E G P +YN+++ FV++ ++A+G++ +M E+ P D+ TYN ++ G
Sbjct: 608 LEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVP-DVFTYNSILHG 666
Query: 671 LGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINP 730
+ + A +L K++++G D Y +IN EA + ++M G +P
Sbjct: 667 FCRQNQMKEAEVVLRKMIERGVNP-DRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSP 725
Query: 731 D 731
D
Sbjct: 726 D 726
Score = 127 bits (318), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 118/487 (24%), Positives = 223/487 (45%), Gaps = 38/487 (7%)
Query: 305 NEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLF 364
N+ ++I+ ++ ++ +A + F+ ++ G N+L+ + + V A ++
Sbjct: 164 NDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVY 223
Query: 365 EKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCRE 424
+++ + GV + +T NI+++ L ++G+ E T +++KG + D +T++ ++ +
Sbjct: 224 QEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSK 283
Query: 425 GQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFT-ERLMKHIRDG-------- 475
G +EEA L+ M G+GF + T ++++ G K+G+++ E + +R G
Sbjct: 284 GLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTY 343
Query: 476 -NLVLDVLKWKADVEATMKSRKSKR-KDYTPMFPYKGDL---SEIMSLIGSTNLETDANL 530
+L+++ K K DV T K R +D P DL S +MSL + NL
Sbjct: 344 RSLLMEACK-KGDVVETEKVFSDMRSRDVVP------DLVCFSSMMSLFTRS-----GNL 391
Query: 531 GSGEGDAKDEGSQLTNS-DEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMG-T 588
D+ NS E P ++ C + S+A LR + G
Sbjct: 392 --------DKALMYFNSVKEAGLIPDNVIYTILIQGYCRKG-MISVAMNLRNEMLQQGCA 442
Query: 589 FDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGV 648
D+ NT L + L A KLF T+ + P +YT ++ K G A +
Sbjct: 443 MDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMEL 502
Query: 649 LNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLG 708
+M EK D+ TYN ++ G GK+G D A I ++ + + Y+ L+N L
Sbjct: 503 FQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEI-LPTPISYSILVNALC 561
Query: 709 KAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHV 768
G EA ++++M + I P V+ N++I+ ++G + FL+ M+ G P+ +
Sbjct: 562 SKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCI 621
Query: 769 TDTTLDF 775
+ TL +
Sbjct: 622 SYNTLIY 628
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/428 (21%), Positives = 183/428 (42%), Gaps = 58/428 (13%)
Query: 370 DGVRTSCWTHNILIDGLFRN----GRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREG 425
D ++C +++ + D L R + A+ F L+ KG V + ++ L R G
Sbjct: 155 DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIG 214
Query: 426 QIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWK 485
+E A + +E+ G +++ T++ ++ K G+ + + +++ + D++ +
Sbjct: 215 WVELAWGVYQEISRSGVGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYN 274
Query: 486 ADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLT 545
+ A + KG + E L+ N G+G
Sbjct: 275 TLISA---------------YSSKGLMEEAFELM---------NAMPGKG---------F 301
Query: 546 NSDEWSSSPYMDKLADQVKSDCHSSQLFS--LARGLRVQGKGMGTFDIDMVNTFLSIFLA 603
+ ++ + ++ L K + + ++F+ L GL T+ S+ +
Sbjct: 302 SPGVYTYNTVINGLCKHGKYE-RAKEVFAEMLRSGLSPDS-----------TTYRSLLME 349
Query: 604 KGKLNLACKLFEIFTDM---GVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTD 660
K + ++F+DM V P ++SMMS F + G ++A N + E D
Sbjct: 350 ACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPD 409
Query: 661 IATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLF 720
Y ++IQG + G +A + +++++QG +DVV YNT+++ L K EA+ LF
Sbjct: 410 NVIYTILIQGYCRKGMISVAMNLRNEMLQQGCA-MDVVTYNTILHGLCKRKMLGEADKLF 468
Query: 721 EQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT-DTTLDFLGR- 778
+M + PD T LI+ + K G L+ A + M + + VT +T LD G+
Sbjct: 469 NEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKV 528
Query: 779 -EIDRLKD 785
+ID K+
Sbjct: 529 GDIDTAKE 536
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 100/237 (42%), Gaps = 25/237 (10%)
Query: 95 CRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSP 154
C+ G L+ L M+E + +D T+ LL+ K G ID A EI M +P
Sbjct: 491 CKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTP 550
Query: 155 NVYDSVLVSLVRKKQLGLAMSILFKLLEA--------CND---------NTAD-NSVVES 196
Y ++ +L K L A + +++ CN N +D S +E
Sbjct: 551 ISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEK 610
Query: 197 L------PGCVACNELLVA-LRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCW 249
+ P C++ N L+ +R+ + F V + +EQ D++ YN +H F
Sbjct: 611 MISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQ 670
Query: 250 GDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNE 306
+ + + ++M E+G+ PD TY +I + +A + +E+ G P++
Sbjct: 671 NQMKEAEVVLRKMIERGVNPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727
>sp|Q9LPX2|PPR39_ARATH Pentatricopeptide repeat-containing protein At1g12775,
mitochondrial OS=Arabidopsis thaliana GN=At1g12775 PE=2
SV=1
Length = 644
Score = 157 bits (396), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 134/567 (23%), Positives = 245/567 (43%), Gaps = 44/567 (7%)
Query: 197 LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSL 256
LP + N L A+ K+ ++ E + E K IY +I I+ F L +
Sbjct: 85 LPTVIDFNRLFSAIAKT-KQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAF 143
Query: 257 RLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGC 316
++ + G PD +N+L+ LC+ +V +AL + + + GH+P T ++ G
Sbjct: 144 STMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGL 203
Query: 317 CKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSC 376
C + ++ DA+ + M G P+ V Y +LN M KS + A +L KM + ++
Sbjct: 204 CLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDA 263
Query: 377 WTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEE 436
++I+IDGL ++G + A+ LF +++ KG D IT++ ++ C G+ ++ +L+ +
Sbjct: 264 VKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRD 323
Query: 437 MEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMK-SR 495
M R ++VT S L+ F K G+ ++L+K + + + + + + ++ K +R
Sbjct: 324 MIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENR 383
Query: 496 KSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPY 555
+ + KG +IM+ N G + + D+G
Sbjct: 384 LEEAIQMVDLMISKGCDPDIMTFNILIN-------GYCKANRIDDG-------------- 422
Query: 556 MDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFE 615
L R + ++G T NT + F GKL +A KLF+
Sbjct: 423 -----------------LELFREMSLRGVIANTV---TYNTLVQGFCQSGKLEVAKKLFQ 462
Query: 616 IFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMG 675
V P +Y ++ G +A + ++ + DI Y ++I G+
Sbjct: 463 EMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNAS 522
Query: 676 RADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTF 735
+ D A + L +G LD YN +I+ L + +A++LF +M G PD +T+
Sbjct: 523 KVDDAWDLFCSLPLKGVK-LDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 736 NTLIEVNGKAGRLKEAHYFLKMMLDSG 762
N LI + A ++ M SG
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSG 608
Score = 151 bits (382), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 116/516 (22%), Positives = 234/516 (45%), Gaps = 45/516 (8%)
Query: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQG 315
L L K+M+ KG+ ++T + +I C K+ A ++ G+EP+ ++ G
Sbjct: 108 LALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNG 167
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTS 375
C R+ +A+++ M G P + N+L+NG+ + KV +A L ++MV+ G + +
Sbjct: 168 LCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPN 227
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVE 435
T+ +++ + ++G+ A L ++++ +D + +SI++ LC++G ++ A L
Sbjct: 228 EVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFN 287
Query: 436 EMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSR 495
EME +GF D++T ++L+ GF GRWD +L++ + + +V+ + +++ +K
Sbjct: 288 EMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEG 347
Query: 496 KSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSG--EGDAKDEGSQLTNSDEWSSS 553
K + D L E+M + N T +L G + + +E Q+ +
Sbjct: 348 KLREADQL--------LKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL------ 393
Query: 554 PYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKL 613
+ C DI N ++ + +++ +L
Sbjct: 394 --------MISKGCDP--------------------DIMTFNILINGYCKANRIDDGLEL 425
Query: 614 FEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGK 673
F + GV TYN+++ F + G A + EM + DI +Y +++ GL
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 674 MGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVV 733
G + A I K+ ++ LD+ +Y +I+ + A + D+A LF + G+ D
Sbjct: 486 NGELEKALEIFGKI-EKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDAR 544
Query: 734 TFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
+N +I + L +A + M + G P+ +T
Sbjct: 545 AYNIMISELCRKDSLSKADILFRKMTEEGHAPDELT 580
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/366 (28%), Positives = 183/366 (50%), Gaps = 12/366 (3%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
+K T T + + +C G + + L++ M E + T+ +L KSG+ A+
Sbjct: 189 HKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAM 248
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPG 199
E+L MEE L Y ++ L + L A + LF +E AD +L G
Sbjct: 249 ELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFN-LFNEMEI-KGFKADIITYNTLIG 306
Query: 200 CVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLF 259
CN A R D + + +R + ++ +++ I +F G L + +L
Sbjct: 307 GF-CN----AGRWDDGAKLLRDMIKR-----KISPNVVTFSVLIDSFVKEGKLREADQLL 356
Query: 260 KEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS 319
KEM ++G+ P+ TYNSLI C ++++A+ + + + G +P+ T I+I G CK+
Sbjct: 357 KEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKA 416
Query: 320 YRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTH 379
R+DD +++F EM G+I +TV YN+L+ G +S K+ A +LF++MV VR ++
Sbjct: 417 NRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSY 476
Query: 380 NILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEG 439
IL+DGL NG E A +F ++K +D + I++ +C ++++A L +
Sbjct: 477 KILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPL 536
Query: 440 RGFVVD 445
+G +D
Sbjct: 537 KGVKLD 542
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 108/472 (22%), Positives = 210/472 (44%), Gaps = 30/472 (6%)
Query: 34 ESGTRNLDPRSIPISEPLVLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRT 93
E G R++ + L ++G + D+ +D FR RP+ T ++ +F
Sbjct: 43 ERGFSTFSDRNLSYRDKLSSGLVGIKADDA---VDLFRDMIQSRPL--PTVIDFNRLFSA 97
Query: 94 VCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLS 153
+ + E V +L M+ + T +++ + K+ +A + + +LG
Sbjct: 98 IAKTKQYELVLALCKQMESKGIAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPD 157
Query: 154 PNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNT--ADNSVVESL-------------- 197
+++++L L + ++ A+ ++ +++E + T N++V L
Sbjct: 158 TVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLID 217
Query: 198 --------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCW 249
P V +L + KS + + ++ ++ E++ + D Y+I I
Sbjct: 218 RMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM-EERNIKLDAVKYSIIIDGLCKD 276
Query: 250 GDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTH 309
G L + LF EM+ KG D+ TYN+LI C G+ D + ++ PN T
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTF 336
Query: 310 RIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQ 369
++I K ++ +A ++ EM G+ P+T+ YNSL++G K ++ EA Q+ + M+
Sbjct: 337 SVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMIS 396
Query: 370 DGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEE 429
G T NILI+G + R + LF ++ +G + +T++ +V C+ G++E
Sbjct: 397 KGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEV 456
Query: 430 ALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDV 481
A +L +EM R D+V+ LL G G + + I + LD+
Sbjct: 457 AKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 112/501 (22%), Positives = 212/501 (42%), Gaps = 84/501 (16%)
Query: 255 SLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQ 314
++ LF++M + +P + +N L + + + L + ++++ G + +T I+I
Sbjct: 72 AVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLSIMIN 131
Query: 315 GCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRT 374
C+ ++ A ++ G PDTV++N+LLNG+ +V EA +L ++MV+ G +
Sbjct: 132 CFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKP 191
Query: 375 SCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLV 434
+ T N L++GL C G++ +A+ L+
Sbjct: 192 TLITLNTLVNGL-----------------------------------CLNGKVSDAVVLI 216
Query: 435 EEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKS 494
+ M GF + VT +L K G+ L++ + + N+ LD +K+ ++ K
Sbjct: 217 DRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKD 276
Query: 495 RKSKRK----DYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEW 550
+ + +K D+ +LIG N+ W
Sbjct: 277 GSLDNAFNLFNEMEIKGFKADIITYNTLIGG----------------------FCNAGRW 314
Query: 551 SSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLA 610
+ L D +K R + TF + + F+ +GKL A
Sbjct: 315 DDGAKL--LRDMIK---------------RKISPNVVTFSV-----LIDSFVKEGKLREA 352
Query: 611 CKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQG 670
+L + G+ P TYNS++ F K+ +A +++ M K C DI T+N++I G
Sbjct: 353 DQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILING 412
Query: 671 LGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINP 730
K R D + + M G + V YNTL+ ++G+ + A LF++M + + P
Sbjct: 413 YCKANRIDDGLELFRE-MSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRP 471
Query: 731 DVVTFNTLIEVNGKAGRLKEA 751
D+V++ L++ G L++A
Sbjct: 472 DIVSYKILLDGLCDNGELEKA 492
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 102/385 (26%), Positives = 188/385 (48%), Gaps = 17/385 (4%)
Query: 81 KHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIE 140
K A YS I +C+ G L+ +L N M+ D T+ L+ +G+ D +
Sbjct: 260 KLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAK 319
Query: 141 ILDYMEELGTSLSPNVYD-SVLV-SLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLP 198
+L M + +SPNV SVL+ S V++ +L A +L ++++ P
Sbjct: 320 LLRDM--IKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQR-----------GIAP 366
Query: 199 GCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRL 258
+ N L+ K +R E Q+ + L K + DI +NI I+ + + L L
Sbjct: 367 NTITYNSLIDGFCKENRLEEAIQMVD-LMISKGCDPDIMTFNILINGYCKANRIDDGLEL 425
Query: 259 FKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCK 318
F+EM +G++ + TYN+L+Q C GK++ A +++E+ P+ +++I++ G C
Sbjct: 426 FREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCD 485
Query: 319 SYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWT 378
+ ++ A++IF +++ + + D +Y +++GM + KV +A LF + GV+
Sbjct: 486 NGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARA 545
Query: 379 HNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEME 438
+NI+I L R A LF + ++G D +T++I++ + A L+EEM+
Sbjct: 546 YNIMISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMK 605
Query: 439 GRGFVVDLVTISSLLIGFHKYGRWD 463
GF D+ T+ ++I G D
Sbjct: 606 SSGFPADVSTV-KMVINMLSSGELD 629
Score = 124 bits (311), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 117/498 (23%), Positives = 217/498 (43%), Gaps = 57/498 (11%)
Query: 232 FEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDAL 291
+E D +N ++ + +L L M E G P L T N+L+ LC+ GKV DA+
Sbjct: 154 YEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAV 213
Query: 292 IVWEELKGSGHEPNEFTH-----------------------------------RIIIQGC 316
++ + + +G +PNE T+ III G
Sbjct: 214 VLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGL 273
Query: 317 CKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSC 376
CK +D+A +F+EM+ G D + YN+L+ G + + + +L M++ + +
Sbjct: 274 CKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNV 333
Query: 377 WTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEE 436
T ++LID + G+ A L ++ ++G + IT++ ++ C+E ++EEA+++V+
Sbjct: 334 VTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDL 393
Query: 437 MEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRK 496
M +G D++T + L+ G+ K R D L + + ++ + + + V+ +S K
Sbjct: 394 MISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGK 453
Query: 497 SK--RKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDE--GSQLTNSDEWSS 552
+ +K + M + + I S + D +GE + E G + E
Sbjct: 454 LEVAKKLFQEMVSRR-----VRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDI 508
Query: 553 SPYMDKLADQVKSDCHSSQL---FSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNL 609
YM + C++S++ + L L ++G + D N +S K L+
Sbjct: 509 GIYM----IIIHGMCNASKVDDAWDLFCSLPLKGVKL---DARAYNIMISELCRKDSLSK 561
Query: 610 ACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQ 669
A LF T+ G P TYN ++ + + A ++ EM P D++T +VI
Sbjct: 562 ADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVIN 621
Query: 670 GLGKMGRADLASTILDKL 687
L +L + LD L
Sbjct: 622 MLSS---GELDKSFLDML 636
Score = 124 bits (310), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 175/374 (46%), Gaps = 12/374 (3%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
++ TY + +C++G LL M+E ++ +D+ + ++++ K G +D A
Sbjct: 224 FQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAF 283
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPG 199
+ + ME G Y++++ + +L +++ + P
Sbjct: 284 NLFNEMEIKGFKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKR-----------KISPN 332
Query: 200 CVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLF 259
V + L+ + K + E Q+ + + Q+ + YN I F L ++++
Sbjct: 333 VVTFSVLIDSFVKEGKLREADQLLKEMM-QRGIAPNTITYNSLIDGFCKENRLEEAIQMV 391
Query: 260 KEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS 319
M KG PD+ T+N LI C ++ D L ++ E+ G N T+ ++QG C+S
Sbjct: 392 DLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTLVQGFCQS 451
Query: 320 YRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTH 379
+++ A K+F EM + PD V Y LL+G+ + ++ +A ++F K+ + + +
Sbjct: 452 GKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIY 511
Query: 380 NILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEG 439
I+I G+ + + A+ LFC L KG +D ++I++ +LCR+ + +A L +M
Sbjct: 512 MIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTE 571
Query: 440 RGFVVDLVTISSLL 453
G D +T + L+
Sbjct: 572 EGHAPDELTYNILI 585
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 112/451 (24%), Positives = 202/451 (44%), Gaps = 45/451 (9%)
Query: 321 RMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHN 380
+ DDA+ +F +M + +P + +N L + + K+++ L ++M G+ S +T +
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 381 ILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGR 440
I+I+ R + A++ + K G D + F+ ++ LC E ++ EAL LV+ M
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 441 GFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRK 500
G L+T+++L+ G G+ + D +++D + VE
Sbjct: 188 GHKPTLITLNTLVNGLCLNGK----------VSDAVVLIDRM-----VET---------- 222
Query: 501 DYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLA 560
+ P G + +M G T L + E + K D S +D L
Sbjct: 223 GFQPNEVTYGPVLNVMCKSGQTALAMELLRKMEERNIK--------LDAVKYSIIIDGLC 274
Query: 561 DQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMV--NTFLSIFLAKGKLNLACKLFEIFT 618
D F+L + ++G F D++ NT + F G+ + KL
Sbjct: 275 ----KDGSLDNAFNLFNEMEIKG-----FKADIITYNTLIGGFCNAGRWDDGAKLLRDMI 325
Query: 619 DMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRAD 678
+ P T++ ++ SFVK+G +A +L EM ++ + TYN +I G K R +
Sbjct: 326 KRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSLIDGFCKENRLE 385
Query: 679 LASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTL 738
A ++D LM G D++ +N LIN KA R D+ LF +M G+ + VT+NTL
Sbjct: 386 EAIQMVD-LMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLRGVIANTVTYNTL 444
Query: 739 IEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
++ ++G+L+ A + M+ P+ V+
Sbjct: 445 VQGFCQSGKLEVAKKLFQEMVSRRVRPDIVS 475
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 82/339 (24%), Positives = 161/339 (47%), Gaps = 12/339 (3%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
+K TY+ + C AG ++ LL M + + + TF +L++ +K GK+ A
Sbjct: 294 FKADIITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREAD 353
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPG 199
++L M + G + + Y+S++ ++ +L A+ ++ ++ D P
Sbjct: 354 QLLKEMMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCD-----------PD 402
Query: 200 CVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLF 259
+ N L+ K++R + ++F + + + YN + F G L + +LF
Sbjct: 403 IMTFNILINGYCKANRIDDGLELFREMSLRGVIA-NTVTYNTLVQGFCQSGKLEVAKKLF 461
Query: 260 KEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS 319
+EM + + PD+ +Y L+ LC G+++ AL ++ +++ S E + + III G C +
Sbjct: 462 QEMVSRRVRPDIVSYKILLDGLCDNGELEKALEIFGKIEKSKMELDIGIYMIIIHGMCNA 521
Query: 320 YRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTH 379
++DDA +F + G+ D YN +++ + + + +A LF KM ++G T+
Sbjct: 522 SKVDDAWDLFCSLPLKGVKLDARAYNIMISELCRKDSLSKADILFRKMTEEGHAPDELTY 581
Query: 380 NILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVV 418
NILI + A A L ++K G D T +V+
Sbjct: 582 NILIRAHLGDDDATTAAELIEEMKSSGFPADVSTVKMVI 620
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/195 (32%), Positives = 98/195 (50%), Gaps = 7/195 (3%)
Query: 594 VNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMG 653
+NT ++ GK++ A L + + G P TY +++ K G A +L +M
Sbjct: 196 LNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKME 255
Query: 654 EKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRF 713
E+ D Y+++I GL K G D A + ++ M+ G D++ YNTLI AGR+
Sbjct: 256 ERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNE-MEIKGFKADIITYNTLIGGFCNAGRW 314
Query: 714 DEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
D+ L M I+P+VVTF+ LI+ K G+L+EA LK M+ G PN +T +L
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374
Query: 774 DFLGREIDRLKDQNR 788
ID +NR
Sbjct: 375 ------IDGFCKENR 383
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 85/384 (22%), Positives = 153/384 (39%), Gaps = 8/384 (2%)
Query: 391 RAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTIS 450
+A+ A LF D+ + I F+ + + + Q E L L ++ME +G + T+S
Sbjct: 68 KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKGIAHSIYTLS 127
Query: 451 SLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEA-TMKSRKSKRKDYTPMFPYK 509
++ F + + + M I D + + + ++ R S+ +
Sbjct: 128 IMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEM 187
Query: 510 GDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHS 569
G +++L T N G D + E P + C S
Sbjct: 188 GHKPTLITL------NTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKS 241
Query: 570 SQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTY 629
Q LR + D + + G L+ A LF G TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITY 301
Query: 630 NSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMK 689
N+++ F G ++ +L +M ++ ++ T++V+I K G+ A +L ++M+
Sbjct: 302 NTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQ 361
Query: 690 QGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLK 749
+G + + YN+LI+ K R +EA + + M + G +PD++TFN LI KA R+
Sbjct: 362 RGIAP-NTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRID 420
Query: 750 EAHYFLKMMLDSGCTPNHVTDTTL 773
+ + M G N VT TL
Sbjct: 421 DGLELFREMSLRGVIANTVTYNTL 444
Score = 35.8 bits (81), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 33/160 (20%), Positives = 65/160 (40%), Gaps = 6/160 (3%)
Query: 614 FEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGK 673
F F+D N +Y +SS + + A + +M + + +N + + K
Sbjct: 46 FSTFSDR-----NLSYRDKLSSGLVGIKADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAK 100
Query: 674 MGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVV 733
+ +L + ++ +G + + + +IN + + A ++ G PD V
Sbjct: 101 TKQYELVLALCKQMESKGIAH-SIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTV 159
Query: 734 TFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
FNTL+ R+ EA + M++ G P +T TL
Sbjct: 160 IFNTLLNGLCLECRVSEALELVDRMVEMGHKPTLITLNTL 199
>sp|Q9FMD3|PP389_ARATH Pentatricopeptide repeat-containing protein At5g16640,
mitochondrial OS=Arabidopsis thaliana GN=At5g16640 PE=2
SV=1
Length = 504
Score = 154 bits (389), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/401 (25%), Positives = 203/401 (50%), Gaps = 20/401 (4%)
Query: 82 HTACTYSHIFRTVCRAGFLEEVPSLLNSM----QEDDVVVDSETFKLLLEPCIKSGKIDF 137
H CT + + CR L S L M E +V TF LL + ++
Sbjct: 114 HNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIV----TFGSLLNGFCRGDRVYD 169
Query: 138 AIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESL 197
A+ + D M +G + +Y++++ L + KQ+ A+ +L ++ + D
Sbjct: 170 ALYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEK---DGIG-------- 218
Query: 198 PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLR 257
P V N L+ L S R S+ ++ + ++E D++ +N I A G + +
Sbjct: 219 PDVVTYNSLISGLCSSGRWSDATRMVSCMT-KREIYPDVFTFNALIDACVKEGRVSEAEE 277
Query: 258 LFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCC 317
++EM + L PD+ TY+ LI LC+ ++ +A ++ + G P+ T+ I+I G C
Sbjct: 278 FYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYC 337
Query: 318 KSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCW 377
KS +++ MK+F EM G++ +TV Y L+ G ++ K+ A ++F +MV GV +
Sbjct: 338 KSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNII 397
Query: 378 THNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEM 437
T+N+L+ GL NG+ E A + D++K G D +T++I++ +C+ G++ +A + +
Sbjct: 398 TYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSL 457
Query: 438 EGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLV 478
+G + D+ T +++++G +K G + L + +++ ++
Sbjct: 458 NCQGLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGIL 498
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 100/408 (24%), Positives = 184/408 (45%), Gaps = 12/408 (2%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
Y + R R L++ L M + + F LL K K D I + + M+
Sbjct: 49 YREMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQ 108
Query: 147 ELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNEL 206
LG + + +L R QL LA+S L K+++ ++ P V L
Sbjct: 109 MLGIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHE-----------PSIVTFGSL 157
Query: 207 LVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKG 266
L + DR + +F+++ ++ ++ YN I + +L L M++ G
Sbjct: 158 LNGFCRGDRVYDALYMFDQMVGMG-YKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDG 216
Query: 267 LVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAM 326
+ PD+ TYNSLI LC G+ DA + + P+ FT +I C K R+ +A
Sbjct: 217 IGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAE 276
Query: 327 KIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGL 386
+ + EM L PD V Y+ L+ G+ ++ EA ++F MV G T++ILI+G
Sbjct: 277 EFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGY 336
Query: 387 FRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDL 446
++ + E LFC++ ++G + +T++I++ CR G++ A + M G ++
Sbjct: 337 CKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNI 396
Query: 447 VTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKS 494
+T + LL G G+ + ++ ++ + D++ + + K+
Sbjct: 397 ITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKA 444
Score = 120 bits (300), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 125/521 (23%), Positives = 207/521 (39%), Gaps = 86/521 (16%)
Query: 252 LHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRI 311
L SL LF M + +P + ++ L+ + + K + +WE+++ G N T I
Sbjct: 62 LDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNI 121
Query: 312 IIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDG 371
++ C+ ++ A+ +M G P V + SLLNG + +V +A +F++MV G
Sbjct: 122 LLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMG 181
Query: 372 VRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEAL 431
+ + +N +IDGL C+ Q++ AL
Sbjct: 182 YKPNVVIYNTIIDGL-----------------------------------CKSKQVDNAL 206
Query: 432 RLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEAT 491
L+ ME G D+VT +SL+ G GRW R
Sbjct: 207 DLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATR------------------------ 242
Query: 492 MKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWS 551
M S +KR+ Y +F + N DA + G +E + S
Sbjct: 243 MVSCMTKREIYPDVFTF--------------NALIDACVKEGRVSEAEEFYE--EMIRRS 286
Query: 552 SSPYMDKLADQVKSDCHSSQLFSLAR--GLRVQGKGMGTF-DIDMVNTFLSIFLAKGKLN 608
P + + + C S+L G V G F D+ + ++ + K+
Sbjct: 287 LDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSK---GCFPDVVTYSILINGYCKSKKVE 343
Query: 609 LACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPT--DIATYNV 666
KLF + GV TY ++ + + G N A + M FC +I TYNV
Sbjct: 344 HGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRM--VFCGVHPNIITYNV 401
Query: 667 VIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTS 726
++ GL G+ + A IL + K G D+V YN +I + KAG +A ++ +
Sbjct: 402 LLHGLCDNGKIEKALVILADMQKNGMD-ADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 727 GINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNH 767
G+ PD+ T+ T++ K G +EA + M + G PN
Sbjct: 461 GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
Score = 98.2 bits (243), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 93/455 (20%), Positives = 197/455 (43%), Gaps = 45/455 (9%)
Query: 321 RMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHN 380
++DD++ +F M +P ++ LL+ + K +K L+E+M G+ + T N
Sbjct: 61 KLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCN 120
Query: 381 ILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGR 440
IL++ R + A + + K G +TF ++ CR ++ +AL + ++M G
Sbjct: 121 ILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGM 180
Query: 441 GFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRK 500
G+ ++V ++++ G K + D L+ + + DV+ + + + S +
Sbjct: 181 GYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWS-- 238
Query: 501 DYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLA 560
D + ++S + + D + DA + +++ ++E+
Sbjct: 239 ----------DATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEE------- 281
Query: 561 DQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIF--LAKGKLNLACKLFEIFT 618
+ R L D D+V L I+ +L+ A ++F
Sbjct: 282 -------------MIRRSL----------DPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318
Query: 619 DMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRAD 678
G P TY+ +++ + K + EM ++ + TY ++IQG + G+ +
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLN 378
Query: 679 LASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTL 738
+A I + M G + +++ YN L++ L G+ ++A ++ M+ +G++ D+VT+N +
Sbjct: 379 VAEEIFRR-MVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNII 437
Query: 739 IEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
I KAG + +A + G P+ T TT+
Sbjct: 438 IRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTM 472
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 93/182 (51%), Gaps = 3/182 (1%)
Query: 595 NTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEM-G 653
N L+ F +L+LA +G P T+ S+++ F + A + ++M G
Sbjct: 120 NILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVG 179
Query: 654 EKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRF 713
+ P ++ YN +I GL K + D A +L+++ K G G DVV YN+LI+ L +GR+
Sbjct: 180 MGYKP-NVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIG-PDVVTYNSLISGLCSSGRW 237
Query: 714 DEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+A + M I PDV TFN LI+ K GR+ EA F + M+ P+ VT + L
Sbjct: 238 SDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLL 297
Query: 774 DF 775
+
Sbjct: 298 IY 299
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/280 (22%), Positives = 125/280 (44%), Gaps = 27/280 (9%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + +C +G + +++ M + ++ D TF L++ C+K G++ A E Y
Sbjct: 223 TYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEF--YE 280
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSIL-FKLLEACNDNTADNSVV-------- 194
E + SL P++ Y ++ L +L A + F + + C + S++
Sbjct: 281 EMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSK 340
Query: 195 -----------ESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEF---EFDIYGYN 240
S G V L + R+ V E + + F +I YN
Sbjct: 341 KVEHGMKLFCEMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYN 400
Query: 241 ICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGS 300
+ +H G + +L + +M++ G+ D+ TYN +I+ +C G+V DA ++ L
Sbjct: 401 VLLHGLCDNGKIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 301 GHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPD 340
G P+ +T+ ++ G K +A +F +M+ +G++P+
Sbjct: 461 GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPN 500
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/221 (21%), Positives = 96/221 (43%), Gaps = 12/221 (5%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TYS + +C L+E + M D T+ +L+ KS K++ +++ M
Sbjct: 293 TYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEM 352
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
+ G + Y ++ R +L +A I F+ + C + P + N
Sbjct: 353 SQRGVVRNTVTYTILIQGYCRAGKLNVAEEI-FRRMVFCGVH----------PNIITYNV 401
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
LL L + + + + + ++ + DI YNI I G++ + ++ + +
Sbjct: 402 LLHGLCDNGKIEKALVILADM-QKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQ 460
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNE 306
GL+PD+ TY +++ L G ++A ++ ++K G PNE
Sbjct: 461 GLMPDIWTYTTMMLGLYKKGLRREADALFRKMKEDGILPNE 501
>sp|Q0WKZ3|PP105_ARATH Pentatricopeptide repeat-containing protein At1g64580
OS=Arabidopsis thaliana GN=At1g64580 PE=2 SV=1
Length = 523
Score = 153 bits (387), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/354 (27%), Positives = 183/354 (51%), Gaps = 12/354 (3%)
Query: 121 TFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL 180
T LL + + A+ ++D M+ G + +Y++V+ L + + L A+ + +
Sbjct: 151 TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFY-- 208
Query: 181 LEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYN 240
C + + V N L+ L S R ++ ++ + ++K + ++ +
Sbjct: 209 ---CMEKKGIRA------DAVTYNTLISGLSNSGRWTDAARLLRDMVKRK-IDPNVIFFT 258
Query: 241 ICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGS 300
I F G+L + L+KEM + +VP++ TYNSLI C+ G + DA +++ +
Sbjct: 259 ALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSK 318
Query: 301 GHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEA 360
G P+ T+ +I G CKS R++D MK+F EM Y GL+ D YN+L++G ++ K+ A
Sbjct: 319 GCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVA 378
Query: 361 CQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQ 420
++F +MV GV T+NIL+D L NG+ E A + DL+K VD IT++I++
Sbjct: 379 QKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQG 438
Query: 421 LCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRD 474
LCR +++EA L + +G D + +++ G + G ++L + +++
Sbjct: 439 LCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKE 492
Score = 126 bits (317), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 94/368 (25%), Positives = 173/368 (47%), Gaps = 20/368 (5%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
++ + T + C+ +E SL++SM V + + ++ K+ ++ A+
Sbjct: 145 FRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNAL 204
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPG 199
E+ ME+ G Y++++ L + A +L +++ D P
Sbjct: 205 EVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKID-----------PN 253
Query: 200 CVACNELLVALRKS----DRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTS 255
+ L+ K + R+ +K++ R F ++ CIH GC GD +
Sbjct: 254 VIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIH--GCLGD---A 308
Query: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQG 315
+F M KG PD+ TYN+LI C +V+D + ++ E+ G + FT+ +I G
Sbjct: 309 KYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHG 368
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTS 375
C++ +++ A K+F+ M G+ PD V YN LL+ + + K+ +A + E + + +
Sbjct: 369 YCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVD 428
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVE 435
T+NI+I GL R + + A+ LF L +KG D I + ++ LCR+G EA +L
Sbjct: 429 IITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCR 488
Query: 436 EMEGRGFV 443
M+ GF+
Sbjct: 489 RMKEDGFM 496
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 112/491 (22%), Positives = 204/491 (41%), Gaps = 46/491 (9%)
Query: 286 KVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYN 345
K DA ++ E+ S P+ ++ K + D + ++ +M+ G+ D +
Sbjct: 59 KFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFT 118
Query: 346 SLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKK 405
L++ + ++ A L KM++ G R S T L++G + R + A +L +
Sbjct: 119 ILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGF 178
Query: 406 GKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFT 465
G + + ++ V+ LC+ + AL + ME +G D VT ++L+ G GRW
Sbjct: 179 GFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDA 238
Query: 466 ERLMKHIRDGNLVLDVLKWKADVEATMKSRK--SKRKDYTPMFPYKGDLSEIMSLIGSTN 523
RL++ + + +V+ + A ++ +K R Y M S + ++ +
Sbjct: 239 ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRR----SVVPNVFTYNS 294
Query: 524 LETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQG 583
L + GDAK YM L V C
Sbjct: 295 LINGFCIHGCLGDAK----------------YMFDL--MVSKGCFP-------------- 322
Query: 584 KGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFN 643
D+ NT ++ F ++ KLF T G+ +TYN+++ + + G N
Sbjct: 323 ------DVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLN 376
Query: 644 QAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTL 703
A V N M + DI TYN+++ L G+ + A +++ L K +D++ YN +
Sbjct: 377 VAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMD-VDIITYNII 435
Query: 704 INVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGC 763
I L + + EA LF + G+ PD + + T+I + G +EA + M + G
Sbjct: 436 IQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGF 495
Query: 764 TPN-HVTDTTL 773
P+ + D TL
Sbjct: 496 MPSERIYDETL 506
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/323 (23%), Positives = 154/323 (47%), Gaps = 36/323 (11%)
Query: 197 LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSL 256
+P V +L + K ++ ++ ++ E D+Y + I IH F L +L
Sbjct: 76 IPSIVDFTRVLTVIAKMNKFDIVIYLYHKM-ENLGISHDLYSFTILIHCFCRCSRLSLAL 134
Query: 257 RLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGC 316
L +M + G P + T SL+ C + ++A+ + + + G G PN + +I G
Sbjct: 135 ALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGL 194
Query: 317 CKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKS---------------RKV---- 357
CK+ +++A+++F M+ G+ D V YN+L++G+ S RK+
Sbjct: 195 CKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNV 254
Query: 358 ----------------MEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCD 401
+EA L+++M++ V + +T+N LI+G +G A +F
Sbjct: 255 IFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDL 314
Query: 402 LKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGR 461
+ KG F D +T++ ++ C+ ++E+ ++L EM +G V D T ++L+ G+ + G+
Sbjct: 315 MVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGK 374
Query: 462 WDFTERLMKHIRDGNLVLDVLKW 484
+ +++ + D + D++ +
Sbjct: 375 LNVAQKVFNRMVDCGVSPDIVTY 397
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 101/410 (24%), Positives = 182/410 (44%), Gaps = 18/410 (4%)
Query: 258 LFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCC 317
L+ +M+ G+ DL+++ LI C ++ AL + ++ G P+ T ++ G C
Sbjct: 101 LYHKMENLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFC 160
Query: 318 KSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCW 377
+ R +A+ + M G +P+ V+YN+++NG+ K+R + A ++F M + G+R
Sbjct: 161 QGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAV 220
Query: 378 THNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEM 437
T+N LI GL +GR A L D+ K+ + I F+ ++ +EG + EA L +EM
Sbjct: 221 TYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEM 280
Query: 438 EGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKS 497
R V ++ T +SL+ GF +G + + + DV+ + + KS++
Sbjct: 281 IRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRV 340
Query: 498 KRKDYTPMF---PYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNS-DEWSSS 553
+D +F Y+G L+G G + + ++ N + S
Sbjct: 341 --EDGMKLFCEMTYQG-------LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVS 391
Query: 554 PYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMV--NTFLSIFLAKGKLNLAC 611
P D + + DC + + V+ D+D++ N + KL A
Sbjct: 392 P--DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 449
Query: 612 KLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEK-FCPTD 660
LF T GV P Y +M+S +KG +A + M E F P++
Sbjct: 450 CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 499
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 90/328 (27%), Positives = 159/328 (48%), Gaps = 23/328 (7%)
Query: 52 VLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQ 111
V+ L KN D + L+ F +C + I + A TY+ + + +G + LL M
Sbjct: 190 VINGLCKNR-DLNNALEVF-YCMEKKGI-RADAVTYNTLISGLSNSGRWTDAARLLRDMV 246
Query: 112 EDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNV--YDSVLVSLVRKKQ 169
+ + + F L++ +K G + A + Y E + S+ PNV Y+S++
Sbjct: 247 KRKIDPNVIFFTALIDTFVKEGNLLEARNL--YKEMIRRSVVPNVFTYNSLINGFCIHGC 304
Query: 170 LGLAMSILFKLL--EACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLK 227
LG A +F L+ + C P V N L+ KS R + ++F +
Sbjct: 305 LGDA-KYMFDLMVSKGC------------FPDVVTYNTLITGFCKSKRVEDGMKLFCEMT 351
Query: 228 EQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKV 287
Q D + YN IH + G L+ + ++F M + G+ PD+ TYN L+ LC GK+
Sbjct: 352 YQG-LVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKI 410
Query: 288 KDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSL 347
+ AL++ E+L+ S + + T+ IIIQG C++ ++ +A +F + G+ PD + Y ++
Sbjct: 411 EKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITM 470
Query: 348 LNGMFKSRKVMEACQLFEKMVQDGVRTS 375
++G+ + EA +L +M +DG S
Sbjct: 471 ISGLCRKGLQREADKLCRRMKEDGFMPS 498
Score = 102 bits (253), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 94/401 (23%), Positives = 177/401 (44%), Gaps = 16/401 (3%)
Query: 100 LEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDS 159
++ SL M + + F +L K K D I + ME LG S +
Sbjct: 60 FDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLYSFTI 119
Query: 160 VLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEF 219
++ R +L LA+++L K+++ + P V LL + +R F
Sbjct: 120 LIHCFCRCSRLSLALALLGKMMK-----------LGFRPSIVTLGSLLNGFCQGNR---F 165
Query: 220 KQVFERLKEQKEFEF--DIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSL 277
++ + F F ++ YN I+ DL+ +L +F M++KG+ D TYN+L
Sbjct: 166 QEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTL 225
Query: 278 IQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGL 337
I L G+ DA + ++ +PN +I K + +A ++ EM +
Sbjct: 226 ISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSV 285
Query: 338 IPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYT 397
+P+ YNSL+NG + +A +F+ MV G T+N LI G ++ R E
Sbjct: 286 VPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMK 345
Query: 398 LFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFH 457
LFC++ +G D T++ ++ C+ G++ A ++ M G D+VT + LL
Sbjct: 346 LFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLC 405
Query: 458 KYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSK 498
G+ + +++ ++ + +D++ + ++ ++ K K
Sbjct: 406 NNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLK 446
>sp|Q3EDF8|PPR28_ARATH Pentatricopeptide repeat-containing protein At1g09900
OS=Arabidopsis thaliana GN=At1g09900 PE=2 SV=1
Length = 598
Score = 152 bits (385), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 106/400 (26%), Positives = 190/400 (47%), Gaps = 32/400 (8%)
Query: 90 IFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELG 149
+ R CR G + +L ++ V D T+ +++ K+G+I+ A+ +LD M
Sbjct: 143 LIRGFCRLGKTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---- 198
Query: 150 TSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLE----------------ACNDNTADN 191
S+SP+V Y+++L SL +L AM +L ++L+ C D+ +
Sbjct: 199 -SVSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGH 257
Query: 192 SVV--------ESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICI 243
++ P V N L+ + K R E + + + ++ +NI +
Sbjct: 258 AMKLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSG-CQPNVITHNIIL 316
Query: 244 HAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHE 303
+ G + +L +M KG P + T+N LI LC G + A+ + E++ G +
Sbjct: 317 RSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQ 376
Query: 304 PNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQL 363
PN ++ ++ G CK +MD A++ M G PD V YN++L + K KV +A ++
Sbjct: 377 PNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEI 436
Query: 364 FEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCR 423
++ G T+N +IDGL + G+ A L +++ K D IT+S +V L R
Sbjct: 437 LNQLSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSR 496
Query: 424 EGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWD 463
EG+++EA++ E E G + VT +S+++G K + D
Sbjct: 497 EGKVDEAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTD 536
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/400 (25%), Positives = 199/400 (49%), Gaps = 19/400 (4%)
Query: 91 FRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGT 150
R + R G LEE L +M V D L+ + GK A +IL+ +E G+
Sbjct: 109 LRQMVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILE--GS 166
Query: 151 SLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLV 208
P+V Y+ ++ + ++ A+S+L ++ + P V N +L
Sbjct: 167 GAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS--------------PDVVTYNTILR 212
Query: 209 ALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLV 268
+L S + + +V +R+ Q++ D+ Y I I A + +++L EM+++G
Sbjct: 213 SLCDSGKLKQAMEVLDRML-QRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCT 271
Query: 269 PDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKI 328
PD+ TYN L+ +C G++ +A+ ++ SG +PN TH II++ C + R DA K+
Sbjct: 272 PDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDAEKL 331
Query: 329 FSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFR 388
++M G P V +N L+N + + + A + EKM Q G + + ++N L+ G +
Sbjct: 332 LADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCK 391
Query: 389 NGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVT 448
+ + A + +G + D +T++ ++ LC++G++E+A+ ++ ++ +G L+T
Sbjct: 392 EKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPVLIT 451
Query: 449 ISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADV 488
++++ G K G+ +L+ +R +L D + + + V
Sbjct: 452 YNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLV 491
Score = 137 bits (344), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 94/382 (24%), Positives = 184/382 (48%), Gaps = 25/382 (6%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ I R++C +G L++ +L+ M + D D T+ +L+E + + A+++LD M
Sbjct: 206 TYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEM 265
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEA-CNDNTADNSVV---------- 194
+ G + Y+ ++ + ++ +L A+ L + + C N ++++
Sbjct: 266 RDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRW 325
Query: 195 ---ESL----------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNI 241
E L P V N L+ L + + E++ Q + + YN
Sbjct: 326 MDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMP-QHGCQPNSLSYNP 384
Query: 242 CIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSG 301
+H F + ++ + M +G PD+ TYN+++ LC GKV+DA+ + +L G
Sbjct: 385 LLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKG 444
Query: 302 HEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEAC 361
P T+ +I G K+ + A+K+ EM+ L PDT+ Y+SL+ G+ + KV EA
Sbjct: 445 CSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAI 504
Query: 362 QLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQL 421
+ F + + G+R + T N ++ GL ++ + + A + +G + +++I++ L
Sbjct: 505 KFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGL 564
Query: 422 CREGQIEEALRLVEEMEGRGFV 443
EG +EAL L+ E+ +G +
Sbjct: 565 AYEGMAKEALELLNELCNKGLM 586
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 107/472 (22%), Positives = 203/472 (43%), Gaps = 49/472 (10%)
Query: 318 KSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCW 377
++ +++ K M Y+G +PD + +L+ G + K +A ++ E + G
Sbjct: 114 RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKILEILEGSGAVPDVI 173
Query: 378 THNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEM 437
T+N++I G + G A ++ L + D +T++ ++ LC G++++A+ +++ M
Sbjct: 174 TYNVMISGYCKAGEINNALSV---LDRMSVSPDVVTYNTILRSLCDSGKLKQAMEVLDRM 230
Query: 438 EGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKS 497
R D++T + L+ + +L+ +RD DV+ + V K
Sbjct: 231 LQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTYNVLVNGICK---- 286
Query: 498 KRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMD 557
+G L E + + D G Q P +
Sbjct: 287 -----------EGRLDEAIKFLN---------------DMPSSGCQ----------PNVI 310
Query: 558 KLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIF 617
++S C + + + L + + + N ++ KG L A + E
Sbjct: 311 THNIILRSMCSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKM 370
Query: 618 TDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRA 677
G P + +YN ++ F K+ ++A L M + C DI TYN ++ L K G+
Sbjct: 371 PQHGCQPNSLSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKV 430
Query: 678 DLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNT 737
+ A IL++L +G + ++ YNT+I+ L KAG+ +A L ++MR + PD +T+++
Sbjct: 431 EDAVEILNQLSSKGCSPV-LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSS 489
Query: 738 LIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTLDFLG----REIDRLKD 785
L+ + G++ EA F G PN VT ++ LG R+ DR D
Sbjct: 490 LVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSI-MLGLCKSRQTDRAID 540
Score = 103 bits (256), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 92/179 (51%), Gaps = 1/179 (0%)
Query: 595 NTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGE 654
N L F + K++ A + E G +P TYN+M+++ K G A +LN++
Sbjct: 383 NPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSS 442
Query: 655 KFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFD 714
K C + TYN VI GL K G+ A +LD+ M+ D + Y++L+ L + G+ D
Sbjct: 443 KGCSPVLITYNTVIDGLAKAGKTGKAIKLLDE-MRAKDLKPDTITYSSLVGGLSREGKVD 501
Query: 715 EANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
EA F + GI P+ VTFN+++ K+ + A FL M++ GC PN + T L
Sbjct: 502 EAIKFFHEFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTIL 560
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 103/194 (53%), Gaps = 4/194 (2%)
Query: 270 DLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIF 329
D+ + N L Q++ G++++ E + G+ P+ +I+G C+ + A KI
Sbjct: 102 DVESNNHLRQMV-RTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLGKTRKAAKIL 160
Query: 330 SEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRN 389
++ +G +PD + YN +++G K+ ++ A + ++M V T+N ++ L +
Sbjct: 161 EILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRM---SVSPDVVTYNTILRSLCDS 217
Query: 390 GRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTI 449
G+ + A + + ++ + D IT++I++ CR+ + A++L++EM RG D+VT
Sbjct: 218 GKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDRGCTPDVVTY 277
Query: 450 SSLLIGFHKYGRWD 463
+ L+ G K GR D
Sbjct: 278 NVLVNGICKEGRLD 291
Score = 83.6 bits (205), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 72/297 (24%), Positives = 117/297 (39%), Gaps = 47/297 (15%)
Query: 76 LRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKI 135
LR + + T++ + +CR G L +L M + +S ++ LL K K+
Sbjct: 336 LRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHGFCKEKKM 395
Query: 136 DFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVE 195
D AIE L+ M G Y+++L +L + ++ A+ IL +L
Sbjct: 396 DRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSK------------ 443
Query: 196 SLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTS 255
C+ +L+ YN I G +
Sbjct: 444 ------GCSPVLIT-----------------------------YNTVIDGLAKAGKTGKA 468
Query: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQG 315
++L EM+ K L PD TY+SL+ L GKV +A+ + E + G PN T I+ G
Sbjct: 469 IKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFHEFERMGIRPNAVTFNSIMLG 528
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGV 372
CKS + D A+ M G P+ Y L+ G+ EA +L ++ G+
Sbjct: 529 LCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEGMAKEALELLNELCNKGL 585
>sp|Q9SV46|PP282_ARATH Pentatricopeptide repeat-containing protein At3g54980,
mitochondrial OS=Arabidopsis thaliana GN=At3g54980 PE=2
SV=1
Length = 851
Score = 151 bits (381), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 166/710 (23%), Positives = 307/710 (43%), Gaps = 68/710 (9%)
Query: 103 VPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLV 162
V L++S + V+S F LL K + D A++I++ M EL + L
Sbjct: 147 VSKLVDSAKSFGFEVNSRAFNYLLNAYSKDRQTDHAVDIVNQMLELDVIPFFPYVNRTLS 206
Query: 163 SLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQV 222
+LV++ L A + +++ D DN V L+ A + ++ +E +V
Sbjct: 207 ALVQRNSLTEAKELYSRMVAIGVD--GDN---------VTTQLLMRASLREEKPAEALEV 255
Query: 223 FERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGL-VPDLHTYNSLIQVL 281
R E+ E D Y++ + A DL + L +EMKEK L VP TY S+I
Sbjct: 256 LSRAIERGA-EPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILAS 314
Query: 282 CVVGKVKDA-----------------------------------LIVWEELKGSGHEPNE 306
G + DA L+++++++ G PN
Sbjct: 315 VKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNS 374
Query: 307 FTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEK 366
T ++I+ K+ M+ A++ + +M+ GL P ++++ G K +K EA +LF++
Sbjct: 375 VTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWLKGQKHEEALKLFDE 434
Query: 367 MVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQ 426
+ G+ + + N ++ L + G+ + A L ++ +G + ++++ V+L CR+
Sbjct: 435 SFETGL-ANVFVCNTILSWLCKQGKTDEATELLSKMESRGIGPNVVSYNNVMLGHCRQKN 493
Query: 427 IEEALRLVEEMEGRGFVVDLVTISSLLIG-FHKYGRWDFTERLMKHIRDGNLVLDVLKWK 485
++ A + + +G + T S L+ G F + + E ++ H+ N+ ++ + ++
Sbjct: 494 MDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALE-VVNHMTSSNIEVNGVVYQ 552
Query: 486 ADVEATMKSRKSK--RKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQ 543
+ K ++ R+ M K MS N D GE D S
Sbjct: 553 TIINGLCKVGQTSKARELLANMIEEKRLCVSCMSY----NSIIDGFFKEGEMD-----SA 603
Query: 544 LTNSDEWSS---SPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGT-FDIDMVNTFLS 599
+ +E SP + + C ++++ A +R + K G DI +
Sbjct: 604 VAAYEEMCGNGISPNVITYTSLMNGLCKNNRM-DQALEMRDEMKNKGVKLDIPAYGALID 662
Query: 600 IFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPT 659
F + + A LF + G++P YNS++S F G A + +M +
Sbjct: 663 GFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKDGLRC 722
Query: 660 DIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANML 719
D+ TY +I GL K G LAS + + M+ G D ++Y ++N L K G+F + +
Sbjct: 723 DLGTYTTLIDGLLKDGNLILASELYTE-MQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKM 781
Query: 720 FEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
FE+M+ + + P+V+ +N +I + + G L EA MLD G P+ T
Sbjct: 782 FEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGAT 831
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 143/629 (22%), Positives = 288/629 (45%), Gaps = 58/629 (9%)
Query: 96 RAGFLEEVPS----LLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTS 151
RA EE P+ +L+ E DS + L ++ C K+ + A +L M+E
Sbjct: 241 RASLREEKPAEALEVLSRAIERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLC 300
Query: 152 L-SPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVES--LPGCVACNELLV 208
+ S Y SV+++ V++ + A+ + ++L +D + N V + + G N+L+
Sbjct: 301 VPSQETYTSVILASVKQGNMDDAIRLKDEML---SDGISMNVVAATSLITGHCKNNDLVS 357
Query: 209 ALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLV 268
AL +F++++++ + +++ I F G++ +L +K+M+ GL
Sbjct: 358 AL----------VLFDKMEKEGPSPNSV-TFSVLIEWFRKNGEMEKALEFYKKMEVLGLT 406
Query: 269 PDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKI 328
P + +++IQ K ++AL +++E +G N F I+ CK + D+A ++
Sbjct: 407 PSVFHVHTIIQGWLKGQKHEEALKLFDESFETGL-ANVFVCNTILSWLCKQGKTDEATEL 465
Query: 329 FSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFR 388
S+M+ G+ P+ V YN+++ G + + + A +F +++ G++ + +T++ILIDG FR
Sbjct: 466 LSKMESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFR 525
Query: 389 NGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEM-EGRGFVVDLV 447
N + A + + V+G+ + ++ LC+ GQ +A L+ M E + V +
Sbjct: 526 NHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCM 585
Query: 448 TISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKR----KDYT 503
+ +S++ GF K G D + + + +V+ + + + K+ + + +D
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEM 645
Query: 504 PMFPYKGDLSEIMSLIGS----TNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKL 559
K D+ +LI +N+E+ + L S + +EG S P + L
Sbjct: 646 KNKGVKLDIPAYGALIDGFCKRSNMESASALFS---ELLEEGLN-------PSQPIYNSL 695
Query: 560 ADQVKSDCHSSQLFSLAR-----GLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLF 614
++ + L + GLR +GT+ T + L G L LA +L+
Sbjct: 696 ISGFRNLGNMVAALDLYKKMLKDGLRCD---LGTY-----TTLIDGLLKDGNLILASELY 747
Query: 615 EIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKM 674
+G+ P Y +++ KKG F + + EM + ++ YN VI G +
Sbjct: 748 TEMQAVGLVPDEIIYTVIVNGLSKKGQFVKVVKMFEEMKKNNVTPNVLIYNAVIAGHYRE 807
Query: 675 GRADLASTILDKLMKQG----GGYLDVVM 699
G D A + D+++ +G G D+++
Sbjct: 808 GNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 120 bits (302), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 83/358 (23%), Positives = 174/358 (48%), Gaps = 26/358 (7%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
+Y+++ CR ++ + +++ E + ++ T+ +L++ C ++ A+E++++M
Sbjct: 480 SYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSILIDGCFRNHDEQNALEVVNHM 539
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEA---CNDNTADNSVVESL----- 197
++ VY +++ L + Q A +L ++E C + NS+++
Sbjct: 540 TSSNIEVNGVVYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGE 599
Query: 198 -----------------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYN 240
P + L+ L K++R + ++ + +K K + DI Y
Sbjct: 600 MDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDEMK-NKGVKLDIPAYG 658
Query: 241 ICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGS 300
I F ++ ++ LF E+ E+GL P YNSLI +G + AL +++++
Sbjct: 659 ALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGNMVAALDLYKKMLKD 718
Query: 301 GHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEA 360
G + T+ +I G K + A ++++EMQ GL+PD ++Y ++NG+ K + ++
Sbjct: 719 GLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQFVKV 778
Query: 361 CQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVV 418
++FE+M ++ V + +N +I G +R G + A+ L ++ KG DG TF I+V
Sbjct: 779 VKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDILV 836
Score = 106 bits (264), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 96/408 (23%), Positives = 184/408 (45%), Gaps = 38/408 (9%)
Query: 95 CRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSP 154
C+ L L + M+++ +S TF +L+E K+G+++ A+E ME LG L+P
Sbjct: 350 CKNNDLVSALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLG--LTP 407
Query: 155 NVYD--SVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRK 212
+V+ +++ ++ ++ A+ + D S L CN +L L K
Sbjct: 408 SVFHVHTIIQGWLKGQKHEEALKLF------------DESFETGLANVFVCNTILSWLCK 455
Query: 213 SDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLH 272
+ E ++ ++ E + ++ YN + ++ + +F + EKGL P+ +
Sbjct: 456 QGKTDEATELLSKM-ESRGIGPNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNY 514
Query: 273 TYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEM 332
TY+ LI ++AL V + S E N ++ II G CK + A ++ + M
Sbjct: 515 TYSILIDGCFRNHDEQNALEVVNHMTSSNIEVNGVVYQTIINGLCKVGQTSKARELLANM 574
Query: 333 -QYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGR 391
+ L + YNS+++G FK ++ A +E+M +G+ + T+ L++GL +N R
Sbjct: 575 IEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNR 634
Query: 392 AEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISS 451
+ A + ++K KG +D + ++ C+ +E A L E+ G +S
Sbjct: 635 MDQALEMRDEMKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNS 694
Query: 452 LLIGFHKYGRW----DFTERLMKH----------------IRDGNLVL 479
L+ GF G D ++++K ++DGNL+L
Sbjct: 695 LISGFRNLGNMVAALDLYKKMLKDGLRCDLGTYTTLIDGLLKDGNLIL 742
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/316 (25%), Positives = 147/316 (46%), Gaps = 17/316 (5%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLL-NSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDY 144
Y I +C+ G + LL N ++E + V ++ +++ K G++D A+ Y
Sbjct: 550 VYQTIINGLCKVGQTSKARELLANMIEEKRLCVSCMSYNSIIDGFFKEGEMDSAVAA--Y 607
Query: 145 MEELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVA 202
E G +SPNV Y S++ L + ++ A+ + D + V +P A
Sbjct: 608 EEMCGNGISPNVITYTSLMNGLCKNNRMDQALEM--------RDEMKNKGVKLDIP---A 656
Query: 203 CNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEM 262
L+ K +F L E+ YN I F G++ +L L+K+M
Sbjct: 657 YGALIDGFCKRSNMESASALFSELLEEG-LNPSQPIYNSLISGFRNLGNMVAALDLYKKM 715
Query: 263 KEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRM 322
+ GL DL TY +LI L G + A ++ E++ G P+E + +I+ G K +
Sbjct: 716 LKDGLRCDLGTYTTLIDGLLKDGNLILASELYTEMQAVGLVPDEIIYTVIVNGLSKKGQF 775
Query: 323 DDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNIL 382
+K+F EM+ N + P+ ++YN+++ G ++ + EA +L ++M+ G+ T +IL
Sbjct: 776 VKVVKMFEEMKKNNVTPNVLIYNAVIAGHYREGNLDEAFRLHDEMLDKGILPDGATFDIL 835
Query: 383 IDGLFRNGRAEAAYTL 398
+ G N + A +L
Sbjct: 836 VSGQVGNLQPVRAASL 851
Score = 65.9 bits (159), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 68/146 (46%), Gaps = 1/146 (0%)
Query: 628 TYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKL 687
+YNS++ F K+G + A EM ++ TY ++ GL K R D A + D+
Sbjct: 586 SYNSIIDGFFKEGEMDSAVAAYEEMCGNGISPNVITYTSLMNGLCKNNRMDQALEMRDE- 644
Query: 688 MKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGR 747
MK G LD+ Y LI+ K + A+ LF ++ G+NP +N+LI G
Sbjct: 645 MKNKGVKLDIPAYGALIDGFCKRSNMESASALFSELLEEGLNPSQPIYNSLISGFRNLGN 704
Query: 748 LKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ A K ML G + T TTL
Sbjct: 705 MVAALDLYKKMLKDGLRCDLGTYTTL 730
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 78/164 (47%), Gaps = 2/164 (1%)
Query: 610 ACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQ 669
A LF+ G P + T++ ++ F K G +A +M + + +IQ
Sbjct: 358 ALVLFDKMEKEGPSPNSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQ 417
Query: 670 GLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGIN 729
G K + + A + D+ + G +V + NT+++ L K G+ DEA L +M + GI
Sbjct: 418 GWLKGQKHEEALKLFDESFETG--LANVFVCNTILSWLCKQGKTDEATELLSKMESRGIG 475
Query: 730 PDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
P+VV++N ++ + + + A +L+ G PN+ T + L
Sbjct: 476 PNVVSYNNVMLGHCRQKNMDLARIVFSNILEKGLKPNNYTYSIL 519
Score = 52.8 bits (125), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%)
Query: 594 VNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMG 653
VN LS + + L A +L+ +GV N T +M + +++ +A VL+
Sbjct: 201 VNRTLSALVQRNSLTEAKELYSRMVAIGVDGDNVTTQLLMRASLREEKPAEALEVLSRAI 260
Query: 654 EKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRF 713
E+ D Y++ +Q K +A+++L ++ ++ Y ++I K G
Sbjct: 261 ERGAEPDSLLYSLAVQACCKTLDLAMANSLLREMKEKKLCVPSQETYTSVILASVKQGNM 320
Query: 714 DEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
D+A L ++M + GI+ +VV +LI + K L A M G +PN VT + L
Sbjct: 321 DDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVLFDKMEKEGPSPNSVTFSVL 380
Score = 46.6 bits (109), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 1/156 (0%)
Query: 624 PVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTI 683
P TY S++ + VK+G + A + +EM ++ +I G K A +
Sbjct: 302 PSQETYTSVILASVKQGNMDDAIRLKDEMLSDGISMNVVAATSLITGHCKNNDLVSALVL 361
Query: 684 LDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNG 743
DK+ K+G + V ++ LI K G ++A +++M G+ P V +T+I+
Sbjct: 362 FDKMEKEGPSP-NSVTFSVLIEWFRKNGEMEKALEFYKKMEVLGLTPSVFHVHTIIQGWL 420
Query: 744 KAGRLKEAHYFLKMMLDSGCTPNHVTDTTLDFLGRE 779
K + +EA ++G V +T L +L ++
Sbjct: 421 KGQKHEEALKLFDESFETGLANVFVCNTILSWLCKQ 456
>sp|Q3ECK2|PPR92_ARATH Pentatricopeptide repeat-containing protein At1g62680,
mitochondrial OS=Arabidopsis thaliana GN=At1g62680 PE=2
SV=2
Length = 548
Score = 150 bits (380), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 112/436 (25%), Positives = 211/436 (48%), Gaps = 27/436 (6%)
Query: 67 LDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLL 126
+D F RP + ++ + + + + V SL M+ + D TF +++
Sbjct: 70 IDLFSDMVKSRPF--PSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVI 127
Query: 127 EPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEAC-- 184
++ A+ IL M +LG S++ R+ ++ A+S++ K++E
Sbjct: 128 NCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYK 187
Query: 185 NDNTADNSVVESL----------------------PGCVACNELLVALRKSDRRSEFKQV 222
D A N++++SL P V L+ L S R S+ ++
Sbjct: 188 PDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARL 247
Query: 223 FERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLC 282
+ ++K ++ Y+ + AF G + + LF+EM + PD+ TY+SLI LC
Sbjct: 248 LSDMIKKK-ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLC 306
Query: 283 VVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTV 342
+ ++ +A +++ + G + ++ +I G CK+ R++D MK+F EM GL+ +TV
Sbjct: 307 LHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTV 366
Query: 343 VYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDL 402
YN+L+ G F++ V +A + F +M G+ WT+NIL+ GL NG E A +F D+
Sbjct: 367 TYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDM 426
Query: 403 KKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRW 462
+K+ +D +T++ V+ +C+ G++EEA L + +G D+VT ++++ G G
Sbjct: 427 QKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLL 486
Query: 463 DFTERLMKHIRDGNLV 478
E L ++ L+
Sbjct: 487 HEVEALYTKMKQEGLM 502
Score = 130 bits (326), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 109/467 (23%), Positives = 208/467 (44%), Gaps = 57/467 (12%)
Query: 197 LPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSL 256
P V N LL A+ K + + +++ E D+Y +NI I+ F C + +L
Sbjct: 82 FPSIVDFNRLLSAIVKLKKYDVVISLGKKM-EVLGIRNDLYTFNIVINCFCCCFQVSLAL 140
Query: 257 RLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGC 316
+ +M + G PD T SL+ C +V DA+ + +++ G++P+ + II
Sbjct: 141 SILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSL 200
Query: 317 CKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSC 376
CK+ R++DA F E++ G+ P+ V Y +L+NG+ S + +A +L M++ + +
Sbjct: 201 CKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNV 260
Query: 377 WTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEE 436
T++ L+D +NG+ A LF ++ + D +T+S ++ LC +I+EA ++ +
Sbjct: 261 ITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDL 320
Query: 437 MEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRK 496
M +G + D+V+ ++L+ GF K R + +L + + LV + + + ++
Sbjct: 321 MVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQG------ 374
Query: 497 SKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQL----TNSDEWSS 552
F GD+ + A++ SQ+ + D W+
Sbjct: 375 ---------FFQAGDVDK----------------------AQEFFSQMDFFGISPDIWTY 403
Query: 553 SPYMDKLADQVKSDCHSSQLFSLARGLRV----QGKGMGTFDIDMVNTFLSIFLAKGKLN 608
+ + L D + L + L + Q + M DI T + GK+
Sbjct: 404 NILLGGLCDNGE----------LEKALVIFEDMQKREMD-LDIVTYTTVIRGMCKTGKVE 452
Query: 609 LACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEK 655
A LF + G+ P TY +MMS KG ++ + +M ++
Sbjct: 453 EAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQE 499
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 117/520 (22%), Positives = 228/520 (43%), Gaps = 51/520 (9%)
Query: 252 LHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRI 311
L+ ++ LF +M + P + +N L+ + + K + + ++++ G + +T I
Sbjct: 66 LNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNI 125
Query: 312 IIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDG 371
+I C +++ A+ I +M G PD V SL+NG + +V +A L +KMV+ G
Sbjct: 126 VINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG 185
Query: 372 VRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEAL 431
+ +N +ID L + R A+ F ++++KG + +T++ +V LC + +A
Sbjct: 186 YKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAA 245
Query: 432 RLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEA- 490
RL+ +M + +++T S+LL F K G+ + L + + ++ D++ + + +
Sbjct: 246 RLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGL 305
Query: 491 TMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEW 550
+ R + + KG L++++S L +G AK
Sbjct: 306 CLHDRIDEANQMFDLMVSKGCLADVVSY---------NTLINGFCKAK------------ 344
Query: 551 SSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLA 610
++ D +K SQ RGL + NT + F G ++ A
Sbjct: 345 -------RVEDGMKLFREMSQ-----RGL--------VSNTVTYNTLIQGFFQAGDVDKA 384
Query: 611 CKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQG 670
+ F G+ P +TYN ++ G +A + +M ++ DI TY VI+G
Sbjct: 385 QEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRG 444
Query: 671 LGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINP 730
+ K G+ + A ++ L +G D+V Y T+++ L G E L+ +M+ G+
Sbjct: 445 MCKTGKVEEAWSLFCSLSLKGLKP-DIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMK 503
Query: 731 DVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTD 770
+ T + G + + +K ML G P+ + D
Sbjct: 504 NDCTLSD--------GDITLSAELIKKMLSCGYAPSLLKD 535
Score = 120 bits (301), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 91/375 (24%), Positives = 176/375 (46%), Gaps = 12/375 (3%)
Query: 122 FKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL 181
F LL +K K D I + ME LG ++ V+ Q+ LA+SIL K+L
Sbjct: 88 FNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDLYTFNIVINCFCCCFQVSLALSILGKML 147
Query: 182 EACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNI 241
+ + P V L+ + +R S+ + +++ E ++ DI YN
Sbjct: 148 KLGYE-----------PDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIG-YKPDIVAYNA 195
Query: 242 CIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSG 301
I + ++ + FKE++ KG+ P++ TY +L+ LC + DA + ++
Sbjct: 196 IIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKK 255
Query: 302 HEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEAC 361
PN T+ ++ K+ ++ +A ++F EM + PD V Y+SL+NG+ ++ EA
Sbjct: 256 ITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEAN 315
Query: 362 QLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQL 421
Q+F+ MV G ++N LI+G + R E LF ++ ++G + +T++ ++
Sbjct: 316 QMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGF 375
Query: 422 CREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDV 481
+ G +++A +M+ G D+ T + LL G G + + + ++ + LD+
Sbjct: 376 FQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDI 435
Query: 482 LKWKADVEATMKSRK 496
+ + + K+ K
Sbjct: 436 VTYTTVIRGMCKTGK 450
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 112/492 (22%), Positives = 189/492 (38%), Gaps = 113/492 (22%)
Query: 318 KSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCW 377
+ +++DA+ +FS+M + P V +N LL+ + K +K L +KM G+R
Sbjct: 62 RDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRN--- 118
Query: 378 THNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEM 437
D TF+IV+ C Q+ AL ++ +M
Sbjct: 119 --------------------------------DLYTFNIVINCFCCCFQVSLALSILGKM 146
Query: 438 EGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKS 497
G+ D VTI SL+ GF + R L+ + + D++ + A +++ K+++
Sbjct: 147 LKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRV 206
Query: 498 KRK-DYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYM 556
D+ KG +++ N L NS WS + +
Sbjct: 207 NDAFDFFKEIERKGIRPNVVTYTALVN-------------------GLCNSSRWSDAARL 247
Query: 557 DKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEI 616
L+D +K T ++ + L F+ GK+ A +LFE
Sbjct: 248 --LSDMIKKKI--------------------TPNVITYSALLDAFVKNGKVLEAKELFEE 285
Query: 617 FTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGR 676
M + P TY+S+++ ++A + + M K C D+ +YN +I G K R
Sbjct: 286 MVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKR 345
Query: 677 ADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDV---- 732
+ + + M Q G + V YNTLI +AG D+A F QM GI+PD+
Sbjct: 346 VEDGMKLFRE-MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYN 404
Query: 733 -------------------------------VTFNTLIEVNGKAGRLKEAHYFLKMMLDS 761
VT+ T+I K G+++EA +
Sbjct: 405 ILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLK 464
Query: 762 GCTPNHVTDTTL 773
G P+ VT TT+
Sbjct: 465 GLKPDIVTYTTM 476
>sp|O80958|PP194_ARATH Pentatricopeptide repeat-containing protein At2g39230,
mitochondrial OS=Arabidopsis thaliana GN=LOJ PE=1 SV=1
Length = 867
Score = 150 bits (379), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 176/806 (21%), Positives = 336/806 (41%), Gaps = 97/806 (12%)
Query: 44 SIPISEPLVLQVLGKNSLDSSKKLDFF-----------RWCSSLRPIYKHTACTYSHIF- 91
S+P PL +N +D ++ ++ ++C+ ++P+ H C +F
Sbjct: 60 SVPNHSPLTSTSETENHVDDARVIEVLLGRRNDPVSALQYCNWVKPL--HRLCEGGDVFW 117
Query: 92 ----------RTVCRAG-----FLEEVPSLLNSMQEDDVVVDSE---------TFKLLLE 127
T RA F+ P+L+ ++ +++V S+ F LL
Sbjct: 118 VLIHILLSSIHTHDRASNLLVMFVSNNPTLIPNVMVNNLVDSSKRFGFELTPRAFNYLLN 177
Query: 128 PCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFK--LLEACN 185
I++ ++D+A++ M + ++VL SLVR + A I K L+
Sbjct: 178 AYIRNKRMDYAVDCFGLMVDRKVVPFVPYVNNVLSSLVRSNLIDEAKEIYNKMVLIGVAG 237
Query: 186 DNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHA 245
DN V L+ A + + E ++F R+ + E D +++ + A
Sbjct: 238 DN-------------VTTQLLMRASLRERKPEEAVKIFRRVMSRGA-EPDGLLFSLAVQA 283
Query: 246 FGCWGDLHTSLRLFKEMKEKGLVP-DLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEP 304
DL +L L +EM+ K VP TY S+I G +++A+ V +E+ G G
Sbjct: 284 ACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEMVGFGIPM 343
Query: 305 NEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLF 364
+ ++ G CK + A+ +F+ M+ GL PD V+++ ++ K+ ++ +A + +
Sbjct: 344 SVIAATSLVNGYCKGNELGKALDLFNRMEEEGLAPDKVMFSVMVEWFCKNMEMEKAIEFY 403
Query: 365 EKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCRE 424
+M + S + +I G + EAA +F D + G + + L C++
Sbjct: 404 MRMKSVRIAPSSVLVHTMIQGCLKAESPEAALEIFND-SFESWIAHGFMCNKIFLLFCKQ 462
Query: 425 GQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWD-----FTERLMKHIRDGNLVL 479
G+++ A ++ ME +G ++V +++++ + D F+E L K + N
Sbjct: 463 GKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRMKNMDLARSIFSEMLEKGLEPNNFTY 522
Query: 480 DVL------------KWKADVEATMKSRKSKRKDYTPMFP---YKGDLSEIMSLI----- 519
+L W + + ++ Y + G S+ ++
Sbjct: 523 SILIDGFFKNKDEQNAWDVINQMNASNFEANEVIYNTIINGLCKVGQTSKAKEMLQNLIK 582
Query: 520 --------GSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQ 571
S N D + G+ D+ E + E SP + + C S++
Sbjct: 583 EKRYSMSCTSYNSIIDGFVKVGDTDSAVETYR--EMSENGKSPNVVTFTSLINGFCKSNR 640
Query: 572 LFSLARGLRVQGKGMG-TFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYN 630
+ LA + + K M D+ + F K + A LF ++G+ P YN
Sbjct: 641 M-DLALEMTHEMKSMELKLDLPAYGALIDGFCKKNDMKTAYTLFSELPELGLMPNVSVYN 699
Query: 631 SMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQ 690
S++S F G + A + +M D+ TY +I GL K G +LAS + +L+
Sbjct: 700 SLISGFRNLGKMDAAIDLYKKMVNDGISCDLFTYTTMIDGLLKDGNINLASDLYSELLDL 759
Query: 691 GGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKE 750
G D +++ L+N L K G+F +A+ + E+M+ + P+V+ ++T+I + + G L E
Sbjct: 760 -GIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREGNLNE 818
Query: 751 AHYFLKMMLDSGCTPNHVTDTTLDFL 776
A ML+ G + DT + L
Sbjct: 819 AFRLHDEMLEKGIVHD---DTVFNLL 841
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 142/630 (22%), Positives = 268/630 (42%), Gaps = 74/630 (11%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQ-EDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
+S + C+ L LL M+ + V ET+ ++ +K G ++ A+ ++D M
Sbjct: 277 FSLAVQAACKTPDLVMALDLLREMRGKLGVPASQETYTSVIVAFVKEGNMEEAVRVMDEM 336
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
G +S S++ + +LG A+ + ++ E + A + V+ S+ C
Sbjct: 337 VGFGIPMSVIAATSLVNGYCKGNELGKALDLFNRMEE---EGLAPDKVMFSVMVEWFCKN 393
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAF--GCWG--DLHTSLRLFKE 261
+ + ++ EF + R+K + I ++ +H GC +L +F +
Sbjct: 394 M-----EMEKAIEF---YMRMKSVR-----IAPSSVLVHTMIQGCLKAESPEAALEIFND 440
Query: 262 MKEKGLVPDLHTY--NSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS 319
E + H + N + + C GKV A + ++ G EPN + ++ C+
Sbjct: 441 SFESWIA---HGFMCNKIFLLFCKQGKVDAATSFLKMMEQKGIEPNVVFYNNMMLAHCRM 497
Query: 320 YRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTH 379
MD A IFSEM GL P+ Y+ L++G FK++ A + +M + +
Sbjct: 498 KNMDLARSIFSEMLEKGLEPNNFTYSILIDGFFKNKDEQNAWDVINQMNASNFEANEVIY 557
Query: 380 NILIDGLFRNGRAEAAYTLFCDLKKKGKF-VDGITFSIVVLQLCREGQIEEALRLVEEME 438
N +I+GL + G+ A + +L K+ ++ + +++ ++ + G + A+ EM
Sbjct: 558 NTIINGLCKVGQTSKAKEMLQNLIKEKRYSMSCTSYNSIIDGFVKVGDTDSAVETYREMS 617
Query: 439 GRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSK 498
G ++VT +SL+ GF K R D + ++ L LD+ + A ++ K K+
Sbjct: 618 ENGKSPNVVTFTSLINGFCKSNRMDLALEMTHEMKSMELKLDLPAYGALIDGFCK--KND 675
Query: 499 RKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDK 558
K +F SE+ L N+ +L SG + + MD
Sbjct: 676 MKTAYTLF------SELPELGLMPNVSVYNSLISG----------------FRNLGKMDA 713
Query: 559 LADQVK---SDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFE 615
D K +D S LF+ T + L G +NLA L+
Sbjct: 714 AIDLYKKMVNDGISCDLFTYT-------------------TMIDGLLKDGNINLASDLYS 754
Query: 616 IFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMG 675
D+G+ P + +++ KKG F +A +L EM +K ++ Y+ VI G + G
Sbjct: 755 ELLDLGIVPDEILHMVLVNGLSKKGQFLKASKMLEEMKKKDVTPNVLLYSTVIAGHHREG 814
Query: 676 RADLASTILDKLMKQGGGYLDVVMYNTLIN 705
+ A + D+++++G + D V +N L++
Sbjct: 815 NLNEAFRLHDEMLEKGIVHDDTV-FNLLVS 843
>sp|Q9SR00|PP213_ARATH Pentatricopeptide repeat-containing protein At3g04760,
chloroplastic OS=Arabidopsis thaliana GN=At3g04760 PE=2
SV=1
Length = 602
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 128/502 (25%), Positives = 213/502 (42%), Gaps = 42/502 (8%)
Query: 250 GDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTH 309
G+ SL L + M KG PD+ LI+ + + A+ V E L+ G +P+ F +
Sbjct: 103 GNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFAY 161
Query: 310 RIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQ 369
+I G CK R+DDA ++ M+ PDTV YN ++ + K+ A ++ +++
Sbjct: 162 NALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLS 221
Query: 370 DGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEE 429
D + + T+ ILI+ G + A L ++ +G D T++ ++ +C+EG ++
Sbjct: 222 DNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDR 281
Query: 430 ALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVE 489
A +V +E +G D+++ + LL G+W+ E+LM
Sbjct: 282 AFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLM-------------------- 321
Query: 490 ATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDE 549
T MF K D + + I T L D + K + D
Sbjct: 322 -------------TKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDA 368
Query: 550 WSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNL 609
+S P + + C +L L DI NT L+ GK +
Sbjct: 369 YSYDPL-------IAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQ 421
Query: 610 ACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQ 669
A ++F ++G P + +YN+M S+ G +A ++ EM D TYN +I
Sbjct: 422 ALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMIS 481
Query: 670 GLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGIN 729
L + G D A +L M+ + VV YN ++ KA R ++A + E M +G
Sbjct: 482 CLCREGMVDEAFELLVD-MRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCR 540
Query: 730 PDVVTFNTLIEVNGKAGRLKEA 751
P+ T+ LIE G AG EA
Sbjct: 541 PNETTYTVLIEGIGFAGYRAEA 562
Score = 148 bits (373), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 127/499 (25%), Positives = 210/499 (42%), Gaps = 56/499 (11%)
Query: 198 PGCVACNELL---VALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHT 254
P + C +L+ LR + ++ E+ + D++ YN I+ F +
Sbjct: 122 PDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQP-----DVFAYNALINGFCKMNRIDD 176
Query: 255 SLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQ 314
+ R+ M+ K PD TYN +I LC GK+ AL V +L +P T+ I+I+
Sbjct: 177 ATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIE 236
Query: 315 GCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRT 374
+D+A+K+ EM GL PD YN+++ GM K V A ++ + G
Sbjct: 237 ATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEP 296
Query: 375 SCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLV 434
++NIL+ L G+ E L + + + +T+SI++ LCR+G+IEEA+ L+
Sbjct: 297 DVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLL 356
Query: 435 EEMEGRGFVVDLVTISSLLIGFHKYGRWDFT-ERLMKHIRDGNLVLDVLKWKADVEATMK 493
+ M+ +G D + L+ F + GR D E L I DG L D++ + + K
Sbjct: 357 KLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLP-DIVNYNTVLATLCK 415
Query: 494 SRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSS 553
+ K+ + LE LG S WSS
Sbjct: 416 NGKADQA-----------------------LEIFGKLGEVGCSPNSSSYNTMFSALWSS- 451
Query: 554 PYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKL 613
D+++ +L L + G+ +I N+ +S +G ++ A
Sbjct: 452 ------GDKIR---------ALHMILEMMSNGIDPDEI-TYNSMISCLCREGMVDEA--- 492
Query: 614 FEIFTDM---GVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQG 670
FE+ DM HP TYN ++ F K A VL M C + TY V+I+G
Sbjct: 493 FELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEG 552
Query: 671 LGKMGRADLASTILDKLMK 689
+G G A + + L++
Sbjct: 553 IGFAGYRAEAMELANDLVR 571
Score = 142 bits (359), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 118/494 (23%), Positives = 214/494 (43%), Gaps = 46/494 (9%)
Query: 282 CVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDT 341
C G ++L + E + G+ P+ +I+G + A+++ ++ G PD
Sbjct: 100 CRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFGQ-PDV 158
Query: 342 VVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCD 401
YN+L+NG K ++ +A ++ ++M T+NI+I L G+ + A +
Sbjct: 159 FAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQ 218
Query: 402 LKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGR 461
L IT++I++ EG ++EAL+L++EM RG D+ T ++++ G K G
Sbjct: 219 LLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGM 278
Query: 462 WDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRK--SKRKDYTPMFPYKGDLSEIMSLI 519
D +++++ DV+ + + A + K K T MF K D + + I
Sbjct: 279 VDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSI 338
Query: 520 GSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGL 579
T L D + K + D +S P
Sbjct: 339 LITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDP------------------------- 373
Query: 580 RVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKK 639
++ F +G+L++A + E G P YN+++++ K
Sbjct: 374 -----------------LIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKN 416
Query: 640 GYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVM 699
G +QA + ++GE C + ++YN + L G A ++ ++M G D +
Sbjct: 417 GKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDP-DEIT 475
Query: 700 YNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMML 759
YN++I+ L + G DEA L MR+ +P VVT+N ++ KA R+++A L+ M+
Sbjct: 476 YNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMV 535
Query: 760 DSGCTPNHVTDTTL 773
+GC PN T T L
Sbjct: 536 GNGCRPNETTYTVL 549
Score = 140 bits (352), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 96/379 (25%), Positives = 191/379 (50%), Gaps = 20/379 (5%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + ++C G L+ +LN + D+ T+ +L+E + G +D A++++D M
Sbjct: 195 TYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEM 254
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKL-LEACNDNTADNSVVESLPGCVA 202
L L P++ Y++++ + ++ + A ++ L L+ C P ++
Sbjct: 255 --LSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCE------------PDVIS 300
Query: 203 CNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEM 262
N LL AL + E +++ ++ +K + ++ Y+I I G + ++ L K M
Sbjct: 301 YNILLRALLNQGKWEEGEKLMTKMFSEK-CDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 263 KEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRM 322
KEKGL PD ++Y+ LI C G++ A+ E + G P+ + ++ CK+ +
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKA 419
Query: 323 DDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNIL 382
D A++IF ++ G P++ YN++ + ++ S + A + +M+ +G+ T+N +
Sbjct: 420 DQALEIFGKLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSM 479
Query: 383 IDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGF 442
I L R G + A+ L D++ +T++IV+L C+ +IE+A+ ++E M G G
Sbjct: 480 ISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGC 539
Query: 443 VVDLVTISSLL--IGFHKY 459
+ T + L+ IGF Y
Sbjct: 540 RPNETTYTVLIEGIGFAGY 558
Score = 129 bits (323), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 96/382 (25%), Positives = 191/382 (50%), Gaps = 20/382 (5%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
Y+ + C+ +++ +L+ M+ D D+ T+ +++ GK+D A+++L+ +
Sbjct: 160 AYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQL 219
Query: 146 EELGTSLSPNV--YDSVLVSLVRKKQLGLAMSILFKLLEAC--NDNTADNSVVESLPGCV 201
L + P V Y ++ + + + + A+ ++ ++L D N+++ +
Sbjct: 220 --LSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGM---- 273
Query: 202 ACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKE 261
C E +V DR F+ V R E K E D+ YNI + A G +L +
Sbjct: 274 -CKEGMV-----DR--AFEMV--RNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTK 323
Query: 262 MKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYR 321
M + P++ TY+ LI LC GK+++A+ + + +K G P+ +++ +I C+ R
Sbjct: 324 MFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGR 383
Query: 322 MDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNI 381
+D A++ M +G +PD V YN++L + K+ K +A ++F K+ + G + ++N
Sbjct: 384 LDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNT 443
Query: 382 LIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRG 441
+ L+ +G A + ++ G D IT++ ++ LCREG ++EA L+ +M
Sbjct: 444 MFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCE 503
Query: 442 FVVDLVTISSLLIGFHKYGRWD 463
F +VT + +L+GF K R +
Sbjct: 504 FHPSVVTYNIVLLGFCKAHRIE 525
Score = 107 bits (266), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 14/285 (4%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
+Y+ + R + G EE L+ M + + T+ +L+ + GKI+ A+ +L M
Sbjct: 300 SYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLM 359
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL-EACNDNTADNSVVESLPGCVACN 204
+E G + YD ++ + R+ +L +A+ L ++ + C LP V N
Sbjct: 360 KEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGC------------LPDIVNYN 407
Query: 205 ELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKE 264
+L L K+ + + ++F +L E + YN A GD +L + EM
Sbjct: 408 TVLATLCKNGKADQALEIFGKLGEVG-CSPNSSSYNTMFSALWSSGDKIRALHMILEMMS 466
Query: 265 KGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDD 324
G+ PD TYNS+I LC G V +A + +++ P+ T+ I++ G CK++R++D
Sbjct: 467 NGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIED 526
Query: 325 AMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQ 369
A+ + M NG P+ Y L+ G+ + EA +L +V+
Sbjct: 527 AINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLVR 571
Score = 62.0 bits (149), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/249 (22%), Positives = 104/249 (41%), Gaps = 47/249 (18%)
Query: 84 ACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILD 143
A +Y + CR G L+ L +M D + D + +L K+GK D A+EI
Sbjct: 368 AYSYDPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFG 427
Query: 144 YMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
+ E+G S + + Y+++ +L A+ ++ +++ N D S+ C+ C
Sbjct: 428 KLGEVGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMS--NGIDPDEITYNSMISCL-C 484
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
E +V + FE L + + EF
Sbjct: 485 REGMV-----------DEAFELLVDMRSCEFH---------------------------- 505
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
P + TYN ++ C +++DA+ V E + G+G PNE T+ ++I+G +
Sbjct: 506 -----PSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRA 560
Query: 324 DAMKIFSEM 332
+AM++ +++
Sbjct: 561 EAMELANDL 569
>sp|Q9C6S6|PPR67_ARATH Putative pentatricopeptide repeat-containing protein At1g31840
OS=Arabidopsis thaliana GN=At1g31840 PE=2 SV=2
Length = 840
Score = 149 bits (377), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 170/761 (22%), Positives = 307/761 (40%), Gaps = 101/761 (13%)
Query: 62 DSSKKLDFFRWC--SSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQED------ 113
+ + L +FRW S P + T +H+ + R G + + + M +
Sbjct: 82 EPNSALKYFRWAEISGKDPSFY----TIAHV---LIRNGMFDVADKVFDEMITNRGKDFN 134
Query: 114 ------DVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRK 167
D +D++ K L+E C + G +D A+EI Y +LG + + +L SL+
Sbjct: 135 VLGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGS 194
Query: 168 KQLGLAMSILFKLLEACNDNT---ADNSVVESL----------------------PGCVA 202
++ L KL + + A V+++L G V+
Sbjct: 195 DRVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVS 254
Query: 203 CNELLVALRKSD-------------------------------RRSEFKQVFERLK--EQ 229
CN++L L +R E + F+ K EQ
Sbjct: 255 CNKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQ 314
Query: 230 KEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKD 289
+ E D+ Y+ I + G L +LF + KG+ D+ ++S I V G +
Sbjct: 315 RGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLAT 374
Query: 290 ALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLN 349
A +V++ + G PN T+ I+I+G C+ R+ +A ++ ++ G+ P V Y+SL++
Sbjct: 375 ASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLID 434
Query: 350 GMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFV 409
G K + L+E M++ G + +L+DGL + G A + + +
Sbjct: 435 GFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLGQSIRL 494
Query: 410 DGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLM 469
+ + F+ ++ CR + +EAL++ M G D+ T ++++ GR + L
Sbjct: 495 NVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLF 554
Query: 470 KHIRDGNLVLDVLKWKADVEATMKSRKS----KRKDYTPMFPYKGDLSE----IMSLIGS 521
+ L D L + ++A K K + D D++ I L
Sbjct: 555 FRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKC 614
Query: 522 TNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRV 581
+E + + + K E +T + + +L + + ++F L L+V
Sbjct: 615 HRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDE-------AERIFEL---LKV 664
Query: 582 QGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGY 641
G T + ++ + + ++ A ++F I + G P TY +M F K
Sbjct: 665 TPFGPNTVTLTIL---IHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVD 721
Query: 642 FNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYN 701
++ + EM EK I +Y+++I GL K GR D A+ I + + DVV Y
Sbjct: 722 IEGSFKLFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAI-DAKLLPDVVAYA 780
Query: 702 TLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVN 742
LI K GR EA +L+E M +G+ PD + L E N
Sbjct: 781 ILIRGYCKVGRLVEAALLYEHMLRNGVKPDDLLQRALSEYN 821
Score = 94.4 bits (233), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 118/531 (22%), Positives = 211/531 (39%), Gaps = 70/531 (13%)
Query: 310 RIIIQGCCKSYRMDDAMKIFS-EMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMV 368
+ +++ CC+ +D A++IF Q +IP VY +LN + S +V F+K+
Sbjct: 150 KFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYR-MLNSLIGSDRVDLIADHFDKLC 208
Query: 369 QDGVRTS-CWTHNILIDGLFRNGRAEAAYTLF--------------CDLKKKGKFVDGI- 412
+ G+ S H ++D LF G A C+ KG VD I
Sbjct: 209 RGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSCNKVLKGLSVDQIE 268
Query: 413 -------------------TFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLL 453
TF ++ C+ G+++ A L + ME RG DL+ S+L+
Sbjct: 269 VASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLI 328
Query: 454 IGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMK-------SRKSKRK------ 500
G+ K G +L + LDV+ + + ++ +K S KR
Sbjct: 329 DGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGIS 388
Query: 501 ----DYTPMFP---YKGDLSEIMSLIGST-------NLETDANLGSGEGDAKDEGSQLTN 546
YT + G + E + G ++ T ++L G + S
Sbjct: 389 PNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFAL 448
Query: 547 SDEWSSSPYM-DKLADQVKSDCHSSQLFSLARGLRVQGKGMGT---FDIDMVNTFLSIFL 602
++ Y D + V D S Q L +R K +G ++ + N+ + +
Sbjct: 449 YEDMIKMGYPPDVVIYGVLVDGLSKQGLML-HAMRFSVKMLGQSIRLNVVVFNSLIDGWC 507
Query: 603 AKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIA 662
+ + A K+F + G+ P T+ ++M + +G +A + M + D
Sbjct: 508 RLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDAL 567
Query: 663 TYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQ 722
Y +I K + + + D LM++ D+ + N +I++L K R ++A+ F
Sbjct: 568 AYCTLIDAFCKHMKPTIGLQLFD-LMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNN 626
Query: 723 MRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ + PD+VT+NT+I RL EA +++ + PN VT T L
Sbjct: 627 LIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTIL 677
>sp|Q9CA58|PP120_ARATH Putative pentatricopeptide repeat-containing protein At1g74580
OS=Arabidopsis thaliana GN=At1g74580 PE=3 SV=1
Length = 763
Score = 149 bits (377), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 139/614 (22%), Positives = 271/614 (44%), Gaps = 26/614 (4%)
Query: 83 TACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEIL 142
T +Y+ I + +G+ ++ + M++ + D +F + ++ K+ + A+ +L
Sbjct: 110 TVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLL 169
Query: 143 DYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVA 202
+ M G ++ Y +V+ + + K+L + + C++
Sbjct: 170 NNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYELFGKMLAS------------GVSLCLS 217
Query: 203 C-NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKE 261
N+LL L K E +++ +++ ++ +++ YN+ I G+L ++R+
Sbjct: 218 TFNKLLRVLCKKGDVKECEKLLDKVIKRGVLP-NLFTYNLFIQGLCQRGELDGAVRMVGC 276
Query: 262 MKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYR 321
+ E+G PD+ TYN+LI LC K ++A + ++ G EP+ +T+ +I G CK
Sbjct: 277 LIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGM 336
Query: 322 MDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNI 381
+ A +I + +NG +PD Y SL++G+ + A LF + + G++ + +N
Sbjct: 337 VQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNT 396
Query: 382 LIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRG 441
LI GL G A L ++ +KG + TF+I+V LC+ G + +A LV+ M +G
Sbjct: 397 LIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKG 456
Query: 442 FVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSK--R 499
+ D+ T + L+ G+ + + ++ + D + DV + + + K+ K +
Sbjct: 457 YFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVM 516
Query: 500 KDYTPMFPYKGDLSEIMSL-IGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDK 558
+ Y M KG + + I +L L G ++ ++ N D + +D
Sbjct: 517 ETYKTMVE-KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDG 575
Query: 559 LADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFT 618
D + + +V N + F K + +A KLF+
Sbjct: 576 FCKNGDLDGAYTLFRKMEEAYKVSS------STPTYNIIIHAFTEKLNVTMAEKLFQEMV 629
Query: 619 DMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEK-FCPTDIATYNVVIQGLGKMGRA 677
D + P YTY M+ F K G N + L EM E F P+ + T VI L R
Sbjct: 630 DRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS-LTTLGRVINCLCVEDRV 688
Query: 678 DLASTILDKLMKQG 691
A+ I+ +++++G
Sbjct: 689 YEAAGIIHRMVQKG 702
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 160/732 (21%), Positives = 301/732 (41%), Gaps = 44/732 (6%)
Query: 62 DSSKKLDFFRWCSSLRPI--YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDS 119
D K L+ F +S+R +KHT TY + + G E + +L M+E+ V +
Sbjct: 19 DPMKALEMF---NSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMREN---VGN 72
Query: 120 ETFKLLLEPCIKS----GKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMS 175
+ + +K+ GK+ A+ + + M+ + Y++++ LV A
Sbjct: 73 HMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHK 132
Query: 176 ILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFD 235
+ ++ D + P + + + K+ R ++ + Q E +
Sbjct: 133 VYMRM--------RDRGIT---PDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQG-CEMN 180
Query: 236 IYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWE 295
+ Y + F LF +M G+ L T+N L++VLC G VK+ + +
Sbjct: 181 VVAYCTVVGGFYEENFKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLD 240
Query: 296 ELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSR 355
++ G PN FT+ + IQG C+ +D A+++ + G PD + YN+L+ G+ K+
Sbjct: 241 KVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNS 300
Query: 356 KVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFS 415
K EA KMV +G+ +T+N LI G + G + A + D G D T+
Sbjct: 301 KFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYR 360
Query: 416 IVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDG 475
++ LC EG+ AL L E G+G +++ ++L+ G G +L + +
Sbjct: 361 SLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEK 420
Query: 476 NLVLDVLKWKADVEATMKSRKSKRKD-YTPMFPYKGDLSEIMS---LIG--STNLETDAN 529
L+ +V + V K D + KG +I + LI ST L+ +
Sbjct: 421 GLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENA 480
Query: 530 LGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTF 589
L + D G + D ++ + ++ L C +S+ + + +
Sbjct: 481 LEILD-VMLDNG---VDPDVYTYNSLLNGL-------CKTSKFEDVMETYKTMVEKGCAP 529
Query: 590 DIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVL 649
++ N L KL+ A L E + V+P T+ +++ F K G + A+ +
Sbjct: 530 NLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLF 589
Query: 650 NEMGEKF-CPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLG 708
+M E + + TYN++I + +A + +++ + G D Y +++
Sbjct: 590 RKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLG-PDGYTYRLMVDGFC 648
Query: 709 KAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHV 768
K G + +M +G P + T +I R+ EA + M+ G P V
Sbjct: 649 KTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLVPEAV 708
Query: 769 TDTTLDFLGREI 780
+T D +E+
Sbjct: 709 -NTICDVDKKEV 719
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 139/622 (22%), Positives = 268/622 (43%), Gaps = 58/622 (9%)
Query: 209 ALRKSDRRSEFKQ---VFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
A++ R+ + ++ VFER+ + + E ++ YN + G + +++ M+++
Sbjct: 82 AMKNYGRKGKVQEAVNVFERM-DFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDR 140
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
G+ PD++++ ++ C + AL + + G E N + ++ G + +
Sbjct: 141 GITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEG 200
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDG 385
++F +M +G+ +N LL + K V E +L +K+++ GV + +T+N+ I G
Sbjct: 201 YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQG 260
Query: 386 LFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVD 445
L + G + A + L ++G D IT++ ++ LC+ + +EA + +M G D
Sbjct: 261 LCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPD 320
Query: 446 LVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPM 505
T ++L+ G+ K G ER++ V D +++ ++ ++ R +
Sbjct: 321 SYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRA--LAL 378
Query: 506 FPYK-GDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNS-DEWSSSPYMDKLADQV 563
F G + ++ +T ++ +N G E +QL N E P + V
Sbjct: 379 FNEALGKGIKPNVILYNTLIKGLSNQG-----MILEAAQLANEMSEKGLIPEVQTFNILV 433
Query: 564 KSDCHSSQLFSLARGLRVQGKGMGTF-DIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGV 622
C + S A GL G F DI N + + + K+ A ++ ++ D GV
Sbjct: 434 NGLCKMGCV-SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492
Query: 623 HPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLAST 682
P YTYNS+++ K F M EK C ++ T+N++++ L + + D A
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552
Query: 683 ILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTS---------------- 726
+L++ MK D V + TLI+ K G D A LF +M +
Sbjct: 553 LLEE-MKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHA 611
Query: 727 --------------------GINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPN 766
+ PD T+ +++ K G + + FL M+++G P+
Sbjct: 612 FTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPS 671
Query: 767 HVTDTTLDFLGREIDRLKDQNR 788
T LGR I+ L ++R
Sbjct: 672 LTT------LGRVINCLCVEDR 687
>sp|Q9SI78|PPR93_ARATH Pentatricopeptide repeat-containing protein At1g62720
OS=Arabidopsis thaliana GN=At1g62720 PE=2 SV=1
Length = 485
Score = 148 bits (374), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 104/397 (26%), Positives = 202/397 (50%), Gaps = 15/397 (3%)
Query: 82 HTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEI 141
H +Y+ + +CR S++ M + D T L+ + ++ AI++
Sbjct: 102 HDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDL 161
Query: 142 LDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCV 201
+ MEE+G +Y++++ + + A+ LF +E D ++V
Sbjct: 162 VSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE-LFDRME--RDGVRADAVTY------ 212
Query: 202 ACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKE 261
N L+ L S R S+ ++ R ++ ++ + I F G +++L++E
Sbjct: 213 --NSLVAGLCCSGRWSDAARLM-RDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEE 269
Query: 262 MKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYR 321
M + + PD+ TYNSLI LC+ G+V +A + + + G P+ T+ +I G CKS R
Sbjct: 270 MTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKR 329
Query: 322 MDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNI 381
+D+ K+F EM GL+ DT+ YN+++ G F++ + A ++F +M R + T++I
Sbjct: 330 VDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM---DSRPNIRTYSI 386
Query: 382 LIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRG 441
L+ GL N R E A LF +++K +D T++IV+ +C+ G +E+A L + +G
Sbjct: 387 LLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKG 446
Query: 442 FVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLV 478
D+V+ ++++ GF + +WD ++ L + +++ L+
Sbjct: 447 LKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLL 483
Score = 135 bits (339), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 111/412 (26%), Positives = 191/412 (46%), Gaps = 34/412 (8%)
Query: 256 LRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQG 315
+ LF M+ G+ DL++YN +I LC + AL V ++ G+EP+ T +I G
Sbjct: 89 ISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLING 148
Query: 316 CCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTS 375
C+ R+ DA+ + S+M+ G PD V+YN++++G K V +A +LF++M +DGVR
Sbjct: 149 FCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRAD 208
Query: 376 CWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVE 435
T+N L+ GL +GR A L D+ + + ITF+ V+ +EG+ EA++L E
Sbjct: 209 AVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYE 268
Query: 436 EMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSR 495
EM R D+ T +SL+ G +GR D ++++ + + DV+ + + KS+
Sbjct: 269 EMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSK 328
Query: 496 KSKRKDYTPMFPYKGDLSEIMSLIGST---NLETDANLGSGEGDAKDEGSQLTNSDEWSS 552
+ + T +F L+G T N +G DA E
Sbjct: 329 RV--DEGTKLFREMAQ----RGLVGDTITYNTIIQGYFQAGRPDAAQE------------ 370
Query: 553 SPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTF----------DIDMVNTFLSIFL 602
++ + +S L+ L RV+ K + F DI N +
Sbjct: 371 --IFSRMDSRPNIRTYSILLYGLCMNWRVE-KALVLFENMQKSEIELDITTYNIVIHGMC 427
Query: 603 AKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGE 654
G + A LF + G+ P +Y +M+S F +K ++++ + +M E
Sbjct: 428 KIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQE 479
Score = 127 bits (319), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/325 (25%), Positives = 165/325 (50%), Gaps = 22/325 (6%)
Query: 154 PNVYD--SVLVSLVRKKQLGLAMSILFKLLEAC---NDNTADNSVVESLPGCVACNELLV 208
P++ D VL + + K L +S LF +E C +D + N V+ L C+ ++
Sbjct: 67 PSIVDFSKVLSKIAKSKNYDLVIS-LFHHMEVCGIGHDLYSYNIVINCL---CRCSRFVI 122
Query: 209 ALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGD-LHTSLRLFKEMKEKGL 267
AL + +F +E D+ + I+ F C G+ + ++ L +M+E G
Sbjct: 123 ALSVVGKMMKFG-----------YEPDVVTVSSLINGF-CQGNRVFDAIDLVSKMEEMGF 170
Query: 268 VPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMK 327
PD+ YN++I C +G V DA+ +++ ++ G + T+ ++ G C S R DA +
Sbjct: 171 RPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAAR 230
Query: 328 IFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLF 387
+ +M ++P+ + + ++++ K K EA +L+E+M + V +T+N LI+GL
Sbjct: 231 LMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 388 RNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLV 447
+GR + A + + KG D +T++ ++ C+ +++E +L EM RG V D +
Sbjct: 291 MHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTI 350
Query: 448 TISSLLIGFHKYGRWDFTERLMKHI 472
T ++++ G+ + GR D + + +
Sbjct: 351 TYNTIIQGYFQAGRPDAAQEIFSRM 375
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 117/486 (24%), Positives = 216/486 (44%), Gaps = 56/486 (11%)
Query: 251 DLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWE-----ELKGSGHEPN 305
+L + LF +M + +P + ++ +VL + K K+ +V E+ G GH+
Sbjct: 49 NLEEEIDLFCKMIQSRPLPSIVDFS---KVLSKIAKSKNYDLVISLFHHMEVCGIGHDL- 104
Query: 306 EFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFE 365
+++ I+I C+ R A+ + +M G PD V +SL+NG + +V +A L
Sbjct: 105 -YSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVS 163
Query: 366 KMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREG 425
KM + G R +N +IDG + G A LF +++ G D +T++ +V LC G
Sbjct: 164 KMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSG 223
Query: 426 QIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWK 485
+ +A RL+ +M R V +++T ++++ F K G++ +L + + + DV +
Sbjct: 224 RWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYN 283
Query: 486 ADVEA-TMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQL 544
+ + M R + K + KG L ++++ N G + DEG++L
Sbjct: 284 SLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLIN-------GFCKSKRVDEGTKL 336
Query: 545 TNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAK 604
++A RGL D NT + +
Sbjct: 337 -----------FREMAQ---------------RGL--------VGDTITYNTIIQGYFQA 362
Query: 605 GKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATY 664
G+ + A EIF+ M P TY+ ++ +A + M + DI TY
Sbjct: 363 GRPDAA---QEIFSRMDSRPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTY 419
Query: 665 NVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMR 724
N+VI G+ K+G + A + L +G DVV Y T+I+ + ++D++++L+ +M+
Sbjct: 420 NIVIHGMCKIGNVEDAWDLFRSLSCKGLK-PDVVSYTTMISGFCRKRQWDKSDLLYRKMQ 478
Query: 725 TSGINP 730
G+ P
Sbjct: 479 EDGLLP 484
Score = 122 bits (306), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 106/437 (24%), Positives = 184/437 (42%), Gaps = 50/437 (11%)
Query: 100 LEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDS 159
LEE L M + + F +L KS D I + +ME G Y+
Sbjct: 50 LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109
Query: 160 VLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEF 219
V+ L R + +A+S++ K+++ + P V + L+ + +R +
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYE-----------PDVVTVSSLINGFCQGNRVFDA 158
Query: 220 KQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQ 279
+ +++E F D+ YN I G ++ ++ LF M+ G+ D TYNSL+
Sbjct: 159 IDLVSKMEEMG-FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVA 217
Query: 280 VLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIP 339
LC G+ DA + ++ PN T +I K + +AMK++ EM + P
Sbjct: 218 GLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDP 277
Query: 340 DTVVYNSLLNGM-----------------------------------FKSRKVMEACQLF 364
D YNSL+NG+ KS++V E +LF
Sbjct: 278 DVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLF 337
Query: 365 EKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCRE 424
+M Q G+ T+N +I G F+ GR +AA +F + + T+SI++ LC
Sbjct: 338 REMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRPNIR---TYSILLYGLCMN 394
Query: 425 GQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKW 484
++E+AL L E M+ +D+ T + ++ G K G + L + + L DV+ +
Sbjct: 395 WRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSY 454
Query: 485 KADVEATMKSRKSKRKD 501
+ + R+ + D
Sbjct: 455 TTMISGFCRKRQWDKSD 471
Score = 102 bits (253), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 197/493 (39%), Gaps = 120/493 (24%)
Query: 319 SYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWT 378
S +++ + +F +M + +P V ++ +L+ + KS+ LF M G+ ++
Sbjct: 47 SMNLEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYS 106
Query: 379 HNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEME 438
+NI+I+ L R R A ++ + K G D +T S ++ C+ ++ +A+ LV +ME
Sbjct: 107 YNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKME 166
Query: 439 GRGFVVDL-----------------------------------VTISSLLIGFHKYGRWD 463
GF D+ VT +SL+ G GRW
Sbjct: 167 EMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWS 226
Query: 464 FTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTN 523
RLM+ + ++V +V+ + A ++ +K +G SE M
Sbjct: 227 DAARLMRDMVMRDIVPNVITFTAVIDVFVK---------------EGKFSEAM------- 264
Query: 524 LETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLF---SLARGLR 580
KL +++ C +F SL GL
Sbjct: 265 ----------------------------------KLYEEMTRRCVDPDVFTYNSLINGLC 290
Query: 581 VQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKG 640
+ G+ +D L + + KG L P TYN++++ F K
Sbjct: 291 MHGR------VDEAKQMLDLMVTKGCL----------------PDVVTYNTLINGFCKSK 328
Query: 641 YFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMY 700
++ + EM ++ D TYN +IQG + GR D A I ++ + ++ Y
Sbjct: 329 RVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSRP----NIRTY 384
Query: 701 NTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLD 760
+ L+ L R ++A +LFE M+ S I D+ T+N +I K G +++A + +
Sbjct: 385 SILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSC 444
Query: 761 SGCTPNHVTDTTL 773
G P+ V+ TT+
Sbjct: 445 KGLKPDVVSYTTM 457
>sp|Q9FMF6|PP444_ARATH Pentatricopeptide repeat-containing protein At5g64320,
mitochondrial OS=Arabidopsis thaliana GN=At5g64320 PE=2
SV=1
Length = 730
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 145/629 (23%), Positives = 258/629 (41%), Gaps = 118/629 (18%)
Query: 234 FDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLV------------------------- 268
FD+Y + I G G+ T RL +MK++G+V
Sbjct: 111 FDVY--QVLIGKLGANGEFKTIDRLLIQMKDEGIVFKESLFISIMRDYDKAGFPGQTTRL 168
Query: 269 -----------PDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCC 317
P +YN ++++L K A V+ ++ P FT ++++ C
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228
Query: 318 KSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCW 377
+D A+ + +M +G +P++V+Y +L++ + K +V EA QL E+M G
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288
Query: 378 THNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEM 437
T N +I GL + R A + + +G D IT+ ++ LC+ G+++ A L +
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRI 348
Query: 438 EGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKH-IRDGNLVLDVLK--------WKA-- 486
++V ++L+ GF +GR D + ++ + +V DV WK
Sbjct: 349 PKP----EIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGL 404
Query: 487 -----DVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEG 541
+V M+++ K Y S + D G+ DE
Sbjct: 405 VGLALEVLHDMRNKGCKPNVY------------------SYTILVDGFCKLGK---IDEA 443
Query: 542 SQLTNSDEWSS---SPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFL 598
+ N E S+ P + + C ++ R + D+ N+ +
Sbjct: 444 YNVLN--EMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLI 501
Query: 599 SIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCP 658
S ++ A L GV TYN+++++F+++G +A ++NEM + P
Sbjct: 502 SGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSP 561
Query: 659 TDIATYNVVIQGLGKMGRADLASTILDKLMKQG--------------------------- 691
D TYN +I+GL + G D A ++ +K+++ G
Sbjct: 562 LDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEF 621
Query: 692 -------GGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGK 744
G D+V +N+LIN L +AGR ++ +F +++ GI PD VTFNTL+ K
Sbjct: 622 QKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCK 681
Query: 745 AGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
G + +A L ++ G PNH T + L
Sbjct: 682 GGFVYDACLLLDEGIEDGFVPNHRTWSIL 710
Score = 146 bits (369), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 110/420 (26%), Positives = 203/420 (48%), Gaps = 21/420 (5%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEIL-DY 144
TY ++ +C+ G ++ L + + ++V+ F L+ + G++D A +L D
Sbjct: 324 TYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVI----FNTLIHGFVTHGRLDDAKAVLSDM 379
Query: 145 MEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL-EACNDNTADNSVVESLPGCVAC 203
+ G Y+S++ ++ +GLA+ +L + + C N ++
Sbjct: 380 VTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTI---------- 429
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
L+ K + E V + + + G+N I AF + ++ +F+EM
Sbjct: 430 --LVDGFCKLGKIDEAYNVLNEMSADG-LKPNTVGFNCLISAFCKEHRIPEAVEIFREMP 486
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
KG PD++T+NSLI LC V ++K AL + ++ G N T+ +I + +
Sbjct: 487 RKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIK 546
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
+A K+ +EM + G D + YNSL+ G+ ++ +V +A LFEKM++DG S + NILI
Sbjct: 547 EARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILI 606
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFV 443
+GL R+G E A ++ +G D +TF+ ++ LCR G+IE+ L + +++ G
Sbjct: 607 NGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIP 666
Query: 444 VDLVTISSLLIGFHKYG-RWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDY 502
D VT ++L+ K G +D L + I DG V + W +++ + R+ +
Sbjct: 667 PDTVTFNTLMSWLCKGGFVYDACLLLDEGIEDG-FVPNHRTWSILLQSIIPQETLDRRRF 725
Score = 132 bits (331), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 162/697 (23%), Positives = 293/697 (42%), Gaps = 68/697 (9%)
Query: 50 PLVLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNS 109
P L L + L+ S ++ F W S + Y+H+ Y + + G + + LL
Sbjct: 78 PFQLYKLLELPLNVSTSMELFSWTGS-QNGYRHSFDVYQVLIGKLGANGEFKTIDRLLIQ 136
Query: 110 MQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGT--SLSPNV--YDSVLVSLV 165
M+++ +V F ++ K+G F + M E+ S P Y+ VL LV
Sbjct: 137 MKDEGIVFKESLFISIMRDYDKAG---FPGQTTRLMLEMRNVYSCEPTFKSYNVVLEILV 193
Query: 166 RKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFER 225
+A ++ + +L T V C A NE+ AL ++ V
Sbjct: 194 SGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC-AVNEIDSALSLLRDMTKHGCVPNS 252
Query: 226 LKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVG 285
+ Y IH+ ++ +L+L +EM G VPD T+N +I LC
Sbjct: 253 VI-----------YQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFD 301
Query: 286 KVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYN 345
++ +A + + G P++ T+ ++ G CK R+D A +F Y P+ V++N
Sbjct: 302 RINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLF----YRIPKPEIVIFN 357
Query: 346 SLLNGMFKSRKVMEACQLFEKMVQD-GVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKK 404
+L++G ++ +A + MV G+ T+N LI G ++ G A + D++
Sbjct: 358 TLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRN 417
Query: 405 KGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDF 464
KG + +++I+V C+ G+I+EA ++ EM G + V + L+ F K R
Sbjct: 418 KGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPE 477
Query: 465 TERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSE-IMSLIGSTN 523
+ + + DV + + + + + K ++ + +SE +++ + N
Sbjct: 478 AVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHA----LWLLRDMISEGVVANTVTYN 533
Query: 524 LETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQG 583
+A L GE E +L N + SP D++ + SL +GL
Sbjct: 534 TLINAFLRRGE---IKEARKLVNEMVFQGSPL-----DEITYN-------SLIKGL---- 574
Query: 584 KGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFN 643
G+++ A LFE G P N + N +++ + G
Sbjct: 575 ------------------CRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616
Query: 644 QAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTL 703
+A EM + DI T+N +I GL + GR + T+ KL +G D V +NTL
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPP-DTVTFNTL 675
Query: 704 INVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIE 740
++ L K G +A +L ++ G P+ T++ L++
Sbjct: 676 MSWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQ 712
>sp|Q9LW84|PP236_ARATH Pentatricopeptide repeat-containing protein At3g16010
OS=Arabidopsis thaliana GN=At3g16010 PE=2 SV=1
Length = 642
Score = 147 bits (372), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 147/613 (23%), Positives = 260/613 (42%), Gaps = 93/613 (15%)
Query: 66 KLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLL 125
K+ FF+W R ++H TY + R + A E + ++QE V T+
Sbjct: 109 KIQFFKWAGKRRN-FQHDCSTYMTLIRCLEEARLYGE---MYRTIQE----VVRNTY--- 157
Query: 126 LEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL-EAC 184
S+SP V ++ +L R K + A+S+ ++ C
Sbjct: 158 ------------------------VSVSPAVLSELVKALGRAKMVSKALSVFYQAKGRKC 193
Query: 185 NDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIH 244
P N +++ L + + + +V+ + + + D Y+ I
Sbjct: 194 K------------PTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALIS 241
Query: 245 AFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEP 304
++ G +++RLF EMK+ + P Y +L+ + VGKV+ AL ++EE+K +G P
Sbjct: 242 SYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGCSP 301
Query: 305 NEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLF 364
+T+ +I+G K+ R+D+A + +M +GL PD V N+L+N + K +V E +F
Sbjct: 302 TVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGKVGRVEELTNVF 361
Query: 365 EKMVQDGVRTSCWTHNILIDGLFRN-GRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCR 423
+M + ++N +I LF + + F +K T+SI++ C+
Sbjct: 362 SEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADSVSPSEFTYSILIDGYCK 421
Query: 424 EGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRD--GNLVLDV 481
++E+AL L+EEM+ +GF SL+ K R++ L K +++ GN+
Sbjct: 422 TNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFKELKENFGNV---- 477
Query: 482 LKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEG 541
+ V A M F G LSE + L N GSG
Sbjct: 478 ---SSRVYAVM----------IKHFGKCGKLSEAVDLFNEMK-----NQGSG-------- 511
Query: 542 SQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIF 601
D ++ + M + VK+ ++ SL R + G DI+ N L+ F
Sbjct: 512 -----PDVYAYNALMSGM---VKAGM-INEANSLLRKMEENG---CRADINSHNIILNGF 559
Query: 602 LAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDI 661
G A ++FE G+ P TYN+++ F G F +A ++ EM +K D
Sbjct: 560 ARTGVPRRAIEMFETIKHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDA 619
Query: 662 ATYNVVIQGLGKM 674
TY+ ++ +G +
Sbjct: 620 ITYSSILDAVGNV 632
Score = 127 bits (318), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 118/546 (21%), Positives = 241/546 (44%), Gaps = 35/546 (6%)
Query: 221 QVFERLKEQKEFEFDIYGYNI---CIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSL 277
Q F+ +++ F+ D Y C+ +G+++ +++ + P + + L
Sbjct: 111 QFFKWAGKRRNFQHDCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAV--LSEL 168
Query: 278 IQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNG- 336
++ L V AL V+ + KG +P T+ +I + + + ++++EM G
Sbjct: 169 VKALGRAKMVSKALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGD 228
Query: 337 LIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAY 396
PDT+ Y++L++ K + A +LF++M + ++ + + L+ F+ G+ E A
Sbjct: 229 CFPDTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKAL 288
Query: 397 TLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGF 456
LF ++K+ G T++ ++ L + G+++EA ++M G D+V +++L+
Sbjct: 289 DLFEEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNIL 348
Query: 457 HKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIM 516
K GR + + + V+ + ++A +F K +SE+
Sbjct: 349 GKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKA--------------LFESKAHVSEVS 394
Query: 517 SLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDC---HSSQLF 573
S ++ + +G TN E + ++++ ++ C + S +
Sbjct: 395 SWFDKMKADS-VSPSEFTYSILIDGYCKTNRVE-KALLLLEEMDEKGFPPCPAAYCSLIN 452
Query: 574 SLARGLRVQG---------KGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHP 624
+L + R + + G + + F GKL+ A LF + G P
Sbjct: 453 ALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGP 512
Query: 625 VNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTIL 684
Y YN++MS VK G N+A +L +M E C DI ++N+++ G + G A +
Sbjct: 513 DVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNIILNGFARTGVPRRAIEMF 572
Query: 685 DKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGK 744
+ + K G D V YNTL+ AG F+EA + +M+ G D +T++++++ G
Sbjct: 573 ETI-KHSGIKPDGVTYNTLLGCFAHAGMFEEAARMMREMKDKGFEYDAITYSSILDAVGN 631
Query: 745 AGRLKE 750
K+
Sbjct: 632 VDHEKD 637
Score = 99.4 bits (246), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 114/442 (25%), Positives = 185/442 (41%), Gaps = 39/442 (8%)
Query: 340 DTVVYNSLLNGMFKSRKVMEACQLFEKMVQDG-VRTSCWTHNILIDGLFRNGRAEAAYTL 398
D Y +L+ + ++R E + +++V++ V S + L+ L R A ++
Sbjct: 125 DCSTYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSKALSV 184
Query: 399 FCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEM--EGRGFVVDLVTISSLLIGF 456
F K + T++ V+L L +EGQ E+ + EM EG F D +T S+L+ +
Sbjct: 185 FYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFP-DTITYSALISSY 243
Query: 457 HKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIM 516
K GR D RL ++D + + + K K ++ DL E M
Sbjct: 244 EKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKA---------LDLFEEM 294
Query: 517 SLIG-STNLETDANLGSGEGDAK--DEGSQLTNSDEWSSSPYMDKLADQVKSDC------ 567
G S + T L G G A DE Y D L D + D
Sbjct: 295 KRAGCSPTVYTYTELIKGLGKAGRVDEAYGF----------YKDMLRDGLTPDVVFLNNL 344
Query: 568 -----HSSQLFSLARGLRVQGKGMGTFDIDMVNTFL-SIFLAKGKLNLACKLFEIFTDMG 621
++ L G T + NT + ++F +K ++ F+
Sbjct: 345 MNILGKVGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS 404
Query: 622 VHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLAS 681
V P +TY+ ++ + K +A +L EM EK P A Y +I LGK R + A+
Sbjct: 405 VSPSEFTYSILIDGYCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAAN 464
Query: 682 TILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEV 741
+ +L K+ G + +Y +I GK G+ EA LF +M+ G PDV +N L+
Sbjct: 465 ELFKEL-KENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNEMKNQGSGPDVYAYNALMSG 523
Query: 742 NGKAGRLKEAHYFLKMMLDSGC 763
KAG + EA+ L+ M ++GC
Sbjct: 524 MVKAGMINEANSLLRKMEENGC 545
Score = 90.1 bits (222), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 114/231 (49%), Gaps = 19/231 (8%)
Query: 564 KSDCHSSQLFSLARGL---RVQGKGMGTFDIDMVNTFLSI--------FLAKGKLNLACK 612
+ DC S +L R L R+ G+ T + NT++S+ A G+ + K
Sbjct: 123 QHDC--STYMTLIRCLEEARLYGEMYRTIQEVVRNTYVSVSPAVLSELVKALGRAKMVSK 180
Query: 613 LFEIFTDMG---VHPVNYTYNSMMSSFVKKGYFNQAWGVLNEM-GEKFCPTDIATYNVVI 668
+F P + TYNS++ +++G + V EM E C D TY+ +I
Sbjct: 181 ALSVFYQAKGRKCKPTSSTYNSVILMLMQEGQHEKVHEVYTEMCNEGDCFPDTITYSALI 240
Query: 669 QGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGI 728
K+GR D A + D+ MK +Y TL+ + K G+ ++A LFE+M+ +G
Sbjct: 241 SSYEKLGRNDSAIRLFDE-MKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLFEEMKRAGC 299
Query: 729 NPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHV-TDTTLDFLGR 778
+P V T+ LI+ GKAGR+ EA+ F K ML G TP+ V + ++ LG+
Sbjct: 300 SPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLTPDVVFLNNLMNILGK 350
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 92/186 (49%), Gaps = 4/186 (2%)
Query: 590 DIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVL 649
D + +S + G+ + A +LF+ D + P Y +++ + K G +A +
Sbjct: 232 DTITYSALISSYEKLGRNDSAIRLFDEMKDNCMQPTEKIYTTLLGIYFKVGKVEKALDLF 291
Query: 650 NEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGK 709
EM C + TY +I+GLGK GR D A +++ G DVV N L+N+LGK
Sbjct: 292 EEMKRAGCSPTVYTYTELIKGLGKAGRVDEAYGFYKDMLRDGLT-PDVVFLNNLMNILGK 350
Query: 710 AGRFDEANMLFEQMRTSGINPDVVTFNTLIEV--NGKAGRLKEAHYFLKMMLDSGCTPNH 767
GR +E +F +M P VV++NT+I+ KA + + +F KM DS +P+
Sbjct: 351 VGRVEELTNVFSEMGMWRCTPTVVSYNTVIKALFESKAHVSEVSSWFDKMKADS-VSPSE 409
Query: 768 VTDTTL 773
T + L
Sbjct: 410 FTYSIL 415
Score = 50.4 bits (119), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/206 (22%), Positives = 93/206 (45%), Gaps = 14/206 (6%)
Query: 85 CTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDY 144
Y + + +A E L ++E+ V S + ++++ K GK+ A+++ +
Sbjct: 445 AAYCSLINALGKAKRYEAANELFKELKENFGNVSSRVYAVMIKHFGKCGKLSEAVDLFNE 504
Query: 145 MEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLE-ACNDNTADNSVVESLPGCVAC 203
M+ G+ Y++++ +V+ + A S+L K+ E C + ++++ L G
Sbjct: 505 MKNQGSGPDVYAYNALMSGMVKAGMINEANSLLRKMEENGCRADINSHNII--LNG---- 558
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
A RR+ ++FE +K + D YN + F G + R+ +EMK
Sbjct: 559 ----FARTGVPRRA--IEMFETIKHSG-IKPDGVTYNTLLGCFAHAGMFEEAARMMREMK 611
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKD 289
+KG D TY+S++ + V KD
Sbjct: 612 DKGFEYDAITYSSILDAVGNVDHEKD 637
>sp|Q9T0D6|PP306_ARATH Pentatricopeptide repeat-containing protein At4g11690
OS=Arabidopsis thaliana GN=At4g11690 PE=2 SV=1
Length = 566
Score = 147 bits (372), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/435 (24%), Positives = 210/435 (48%), Gaps = 43/435 (9%)
Query: 258 LFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCC 317
F E K K +V D++++ LI+ C G+++ + + EL G PN + +I GCC
Sbjct: 151 FFNENKSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCC 209
Query: 318 KSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCW 377
K ++ A +F EM GL+ + Y L+NG+FK+ + +++EKM +DGV + +
Sbjct: 210 KKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLY 269
Query: 378 THNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEM 437
T+N +++ L ++GR + A+ +F +++++G + +T++ ++ LCRE ++ EA ++V++M
Sbjct: 270 TYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQM 329
Query: 438 EGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKS 497
+ G +L+T ++L+ GF G+ L + ++ L ++ + V
Sbjct: 330 KSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSG------- 382
Query: 498 KRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMD 557
F KGD S ++ G + + D ++ S M+
Sbjct: 383 --------FCRKGDTSGAAKMVKEM---------EERGIKPSKVTYTILIDTFARSDNME 425
Query: 558 KLADQVKSDCHSSQLFSLARGLRVQGKGMGTF-DIDMVNTFLSIFLAKGKLNLACKLFEI 616
K A LR+ + +G D+ + + F KG++N A +LF+
Sbjct: 426 K-----------------AIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468
Query: 617 FTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGR 676
+ P YN+M+ + K+G +A +L EM EK ++A+Y +I+ L K +
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528
Query: 677 ADLASTILDKLMKQG 691
+ A +++K++ G
Sbjct: 529 SKEAERLVEKMIDSG 543
Score = 146 bits (368), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 104/392 (26%), Positives = 201/392 (51%), Gaps = 22/392 (5%)
Query: 115 VVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNV--YDSVLVSLVRKKQLGL 172
VV+D +F +L++ C ++G+I+ + ++L + E G SPNV Y +++ +K ++
Sbjct: 159 VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFG--FSPNVVIYTTLIDGCCKKGEIEK 216
Query: 173 AMSILF---KLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQ 229
A + F KL N+ T L+ L K+ + + +++E+++E
Sbjct: 217 AKDLFFEMGKLGLVANERTY--------------TVLINGLFKNGVKKQGFEMYEKMQED 262
Query: 230 KEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKD 289
F ++Y YN ++ G + ++F EM+E+G+ ++ TYN+LI LC K+ +
Sbjct: 263 GVFP-NLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNE 321
Query: 290 ALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLN 349
A V +++K G PN T+ +I G C ++ A+ + +++ GL P V YN L++
Sbjct: 322 ANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVS 381
Query: 350 GMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFV 409
G + A ++ ++M + G++ S T+ ILID R+ E A L +++ G
Sbjct: 382 GFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVP 441
Query: 410 DGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLM 469
D T+S+++ C +GQ+ EA RL + M + + V +++++G+ K G +L+
Sbjct: 442 DVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLL 501
Query: 470 KHIRDGNLVLDVLKWKADVEATMKSRKSKRKD 501
K + + L +V ++ +E K RKSK +
Sbjct: 502 KEMEEKELAPNVASYRYMIEVLCKERKSKEAE 533
Score = 116 bits (291), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 90/358 (25%), Positives = 172/358 (48%), Gaps = 18/358 (5%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
Y+ + C+ G +E+ L M + +V + T+ +L+ K+G E+ + M+
Sbjct: 201 YTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQ 260
Query: 147 ELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLE---ACNDNTADNSVVESLPGCVAC 203
E G + Y+ V+ L + + A + ++ E +CN V
Sbjct: 261 EDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCN--------------IVTY 306
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMK 263
N L+ L + + +E +V +++K ++ YN I F G L +L L +++K
Sbjct: 307 NTLIGGLCREMKLNEANKVVDQMKSDG-INPNLITYNTLIDGFCGVGKLGKALSLCRDLK 365
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMD 323
+GL P L TYN L+ C G A + +E++ G +P++ T+ I+I +S M+
Sbjct: 366 SRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNME 425
Query: 324 DAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILI 383
A+++ M+ GL+PD Y+ L++G ++ EA +LF+ MV+ + +N +I
Sbjct: 426 KAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMI 485
Query: 384 DGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRG 441
G + G + A L ++++K + ++ ++ LC+E + +EA RLVE+M G
Sbjct: 486 LGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/315 (26%), Positives = 144/315 (45%), Gaps = 27/315 (8%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + + + G ++ + MQED V + T+ ++ K G+ A ++ D M
Sbjct: 235 TYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEM 294
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL-LEACNDN-TADNSVVESL------ 197
E G S + Y++++ L R+ +L A ++ ++ + N N N++++
Sbjct: 295 RERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKL 354
Query: 198 ----------------PGCVACNELLVAL-RKSDRRSEFKQVFERLKEQKEFEFDIYGYN 240
P V N L+ RK D K V E E++ + Y
Sbjct: 355 GKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM--EERGIKPSKVTYT 412
Query: 241 ICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGS 300
I I F ++ +++L M+E GLVPD+HTY+ LI C+ G++ +A +++ +
Sbjct: 413 ILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEK 472
Query: 301 GHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEA 360
EPNE + +I G CK A+K+ EM+ L P+ Y ++ + K RK EA
Sbjct: 473 NCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEA 532
Query: 361 CQLFEKMVQDGVRTS 375
+L EKM+ G+ S
Sbjct: 533 ERLVEKMIDSGIDPS 547
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 114/479 (23%), Positives = 209/479 (43%), Gaps = 49/479 (10%)
Query: 309 HRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMV 368
+ +II +S ++ ++ F+EM NG +P + +N LL + S + F +
Sbjct: 97 YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN- 155
Query: 369 QDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIE 428
+ V ++ ILI G G E ++ L +L + G + + ++ ++ C++G+IE
Sbjct: 156 KSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215
Query: 429 EALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADV 488
+A L EM G V + T + L+ G K G + + +++ + ++ + +
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275
Query: 489 EATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTNSD 548
K ++K D +F E+ S N+ T L G L
Sbjct: 276 NQLCKDGRTK--DAFQVF------DEMRERGVSCNIVTYNTLIGG----------LCREM 317
Query: 549 EWSSSPYMDKLADQVKSD----------------CHSSQL---FSLARGLRVQG--KGMG 587
+ + + +K+ DQ+KSD C +L SL R L+ +G +
Sbjct: 318 KLNEA---NKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLV 374
Query: 588 TFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWG 647
T++I +S F KG + A K+ + + G+ P TY ++ +F + +A
Sbjct: 375 TYNI-----LVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQ 429
Query: 648 VLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVL 707
+ M E D+ TY+V+I G G+ + AS + K M + + V+YNT+I
Sbjct: 430 LRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF-KSMVEKNCEPNEVIYNTMILGY 488
Query: 708 GKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPN 766
K G A L ++M + P+V ++ +IEV K + KEA ++ M+DSG P+
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSGIDPS 547
Score = 87.0 bits (214), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 88/163 (53%), Gaps = 4/163 (2%)
Query: 614 FEIFTDM---GVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQG 670
FE++ M GV P YTYN +M+ K G A+ V +EM E+ +I TYN +I G
Sbjct: 253 FEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGG 312
Query: 671 LGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINP 730
L + + + A+ ++D+ MK G +++ YNTLI+ G+ +A L +++ G++P
Sbjct: 313 LCREMKLNEANKVVDQ-MKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSP 371
Query: 731 DVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+VT+N L+ + G A +K M + G P+ VT T L
Sbjct: 372 SLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTIL 414
Score = 85.9 bits (211), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 94/438 (21%), Positives = 179/438 (40%), Gaps = 56/438 (12%)
Query: 343 VYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDL 402
+Y ++N +S+ + + F +MV +G N L+ + + ++ F +
Sbjct: 96 LYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNEN 155
Query: 403 KKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRW 462
K K +D +F I++ C G+IE++ L+ E+ GF ++V ++L+ G K G
Sbjct: 156 KSK-VVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEI 214
Query: 463 DFTERLMKHIRDGNLVLDVLKWKADVEATMKS--RKSKRKDYTPM-----FPYKGDLSEI 515
+ + L + LV + + + K+ +K + Y M FP
Sbjct: 215 EKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFP-------- 266
Query: 516 MSLIGSTNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSL 575
NL T + + +Q+ D + F +
Sbjct: 267 -------NLYT-----------------------------YNCVMNQLCKDGRTKDAFQV 290
Query: 576 ARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSS 635
+R +G + +I NT + + KLN A K+ + G++P TYN+++
Sbjct: 291 FDEMRERGV---SCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDG 347
Query: 636 FVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYL 695
F G +A + ++ + + TYN+++ G + G A+ ++ K M++ G
Sbjct: 348 FCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMV-KEMEERGIKP 406
Query: 696 DVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFL 755
V Y LI+ ++ ++A L M G+ PDV T++ LI G++ EA
Sbjct: 407 SKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLF 466
Query: 756 KMMLDSGCTPNHVTDTTL 773
K M++ C PN V T+
Sbjct: 467 KSMVEKNCEPNEVIYNTM 484
Score = 72.4 bits (176), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/259 (24%), Positives = 118/259 (45%), Gaps = 14/259 (5%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + +CR L E +++ M+ D + + T+ L++ GK+ A+ + +
Sbjct: 305 TYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
+ G S S Y+ ++ RK A ++ ++ E P V
Sbjct: 365 KSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIK-----------PSKVTYTI 413
Query: 206 LLVALRKSDRRSEFKQVFERLK-EQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKE 264
L+ +SD + Q+ RL E+ D++ Y++ IH F G ++ + RLFK M E
Sbjct: 414 LIDTFARSDNMEKAIQL--RLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471
Query: 265 KGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDD 324
K P+ YN++I C G AL + +E++ PN ++R +I+ CK + +
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531
Query: 325 AMKIFSEMQYNGLIPDTVV 343
A ++ +M +G+ P T +
Sbjct: 532 AERLVEKMIDSGIDPSTSI 550
>sp|Q9LVD3|PP434_ARATH Pentatricopeptide repeat-containing protein At5g57250,
mitochondrial OS=Arabidopsis thaliana GN=At5g57250 PE=2
SV=2
Length = 971
Score = 147 bits (370), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 164/658 (24%), Positives = 289/658 (43%), Gaps = 38/658 (5%)
Query: 119 SETFKLLLEPCIKSGKIDFAIEILDYM--EELGTSLSPNVYDSVLVSLVRKKQLGLAMSI 176
S TF L+ ++ G++D AIE+L+ M + + V +V+ + + LA+
Sbjct: 134 SLTFCSLIYRFVEKGEMDNAIEVLEMMTNKNVNYPFDNFVCSAVISGFCKIGKPELALGF 193
Query: 177 LFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDI 236
++ D+ V+ +P V L+ AL + + E + + RL E + FEFD
Sbjct: 194 F--------ESAVDSGVL--VPNLVTYTTLVSALCQLGKVDEVRDLVRRL-EDEGFEFDC 242
Query: 237 YGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEE 296
Y+ IH + G L +L +EM EKG+ D+ +Y+ LI L G V++AL + +
Sbjct: 243 VFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGK 302
Query: 297 LKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRK 356
+ G EPN T+ II+G CK ++++A +F+ + G+ D +Y +L++G+ +
Sbjct: 303 MIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVDEFLYVTLIDGICRKGN 362
Query: 357 VMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSI 416
+ A + M Q G++ S T+N +I+GL GR A D KG D IT+S
Sbjct: 363 LNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEA-----DEVSKGVVGDVITYST 417
Query: 417 VVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGN 476
++ + I+ L + +DLV + LL F G + + L + + + +
Sbjct: 418 LLDSYIKVQNIDAVLEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMD 477
Query: 477 LVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGD 536
L D + ++ K+ + ++ MF S +S N DA G D
Sbjct: 478 LTPDTATYATMIKGYCKT--GQIEEALEMFNELRKSS--VSAAVCYNRIIDALCKKGMLD 533
Query: 537 AKDEGSQLTNSDEWSSSPYMD-----KLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDI 591
E + W Y+D L + ++ + L GL + +
Sbjct: 534 TATE----VLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVC---L 586
Query: 592 DMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNE 651
M+N + + +G A +++ I G+ V + ++++ + V A+ ++
Sbjct: 587 GMLNDAILLLCKRGSFEAAIEVYMIMRRKGL-TVTFP-STILKTLVDNLRSLDAYLLVVN 644
Query: 652 MGE-KFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKA 710
GE D+ Y ++I GL K G + + L K G L+ + YN+LIN L +
Sbjct: 645 AGETTLSSMDVIDYTIIINGLCKEGFL-VKALNLCSFAKSRGVTLNTITYNSLINGLCQQ 703
Query: 711 GRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHV 768
G EA LF+ + G+ P VT+ LI+ K G +A L M+ G PN +
Sbjct: 704 GCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNII 761
Score = 121 bits (304), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 155/695 (22%), Positives = 300/695 (43%), Gaps = 63/695 (9%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + +C+ G ++EV L+ ++++ D + + K G + A+ M
Sbjct: 209 TYTTLVSALCQLGKVDEVRDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREM 268
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
E G + Y ++ L ++ + A+ +L K+++ + P +
Sbjct: 269 VEKGMNRDVVSYSILIDGLSKEGNVEEALGLLGKMIKEGVE-----------PNLITYTA 317
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
++ L K + E +F R+ E D + Y I G+L+ + + +M+++
Sbjct: 318 IIRGLCKMGKLEEAFVLFNRILSVG-IEVDEFLYVTLIDGICRKGNLNRAFSMLGDMEQR 376
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
G+ P + TYN++I LC+ G+V +A V + + G + T+ ++ K +D
Sbjct: 377 GIQPSILTYNTVINGLCMAGRVSEADEVSKGVVG-----DVITYSTLLDSYIKVQNIDAV 431
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDG 385
++I + D V+ N LL EA L+ M + + T+ +I G
Sbjct: 432 LEIRRRFLEAKIPMDLVMCNILLKAFLLMGAYGEADALYRAMPEMDLTPDTATYATMIKG 491
Query: 386 LFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVD 445
+ G+ E A +F +L+K + ++ ++ LC++G ++ A ++ E+ +G +D
Sbjct: 492 YCKTGQIEEALEMFNELRKS-SVSAAVCYNRIIDALCKKGMLDTATEVLIELWEKGLYLD 550
Query: 446 LVTISSLLIGFHK-----------YGRWDF-TERLMKHIRDGNLVL-DVLKWKADVEATM 492
+ T +LL H YG ++ + + D L+L ++A +E M
Sbjct: 551 IHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSFEAAIEVYM 610
Query: 493 KSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANL---GSGEGDAKDEGSQLTNSDE 549
R RK T FP S I+ + DA L +GE + L++ D
Sbjct: 611 IMR---RKGLTVTFP-----STILKTLVDNLRSLDAYLLVVNAGE-------TTLSSMDV 655
Query: 550 WSSSPYMDKLADQ---VKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGK 606
+ ++ L + VK+ S F+ +RG+ T + N+ ++ +G
Sbjct: 656 IDYTIIINGLCKEGFLVKALNLCS--FAKSRGV--------TLNTITYNSLINGLCQQGC 705
Query: 607 LNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNV 666
L A +LF+ ++G+ P TY ++ + K+G F A +L+ M K +I YN
Sbjct: 706 LVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNS 765
Query: 667 VIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTS 726
++ G K+G+ + A ++ + M G D +++I K G +EA +F + +
Sbjct: 766 IVDGYCKLGQTEDAMRVVSRKM-MGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDK 824
Query: 727 GINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDS 761
I+ D F LI+ GR++EA L+ ML S
Sbjct: 825 NISADFFGFLFLIKGFCTKGRMEEARGLLREMLVS 859
Score = 115 bits (288), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 144/585 (24%), Positives = 244/585 (41%), Gaps = 71/585 (12%)
Query: 232 FEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKG-LVPDLHTYNSLIQVLCVVGKVKDA 290
+ FD + + I F G +L F+ + G LVP+L TY +L+ LC +GKV +
Sbjct: 167 YPFDNFVCSAVISGFCKIGKPELALGFFESAVDSGVLVPNLVTYTTLVSALCQLGKVDEV 226
Query: 291 LIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNG 350
+ L+ G E + + I G K + DA+ EM G+ D V Y+ L++G
Sbjct: 227 RDLVRRLEDEGFEFDCVFYSNWIHGYFKGGALVDALMQDREMVEKGMNRDVVSYSILIDG 286
Query: 351 MFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVD 410
+ K V EA L KM+++GV + T+ +I GL + G+ E A+ LF + G VD
Sbjct: 287 LSKEGNVEEALGLLGKMIKEGVEPNLITYTAIIRGLCKMGKLEEAFVLFNRILSVGIEVD 346
Query: 411 GITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMK 470
+ ++ +CR+G + A ++ +ME RG ++T ++++ G GR + + K
Sbjct: 347 EFLYVTLIDGICRKGNLNRAFSMLGDMEQRGIQPSILTYNTVINGLCMAGRVSEADEVSK 406
Query: 471 HIRDGNLV-----LDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLE 525
+ G+++ LD +++A ++ R+ + PM DL L+ + L
Sbjct: 407 GVV-GDVITYSTLLDSYIKVQNIDAVLEIRRRFLEAKIPM-----DLVMCNILLKAFLL- 459
Query: 526 TDANLGS-GEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQL---FSLARGLRV 581
+G+ GE DA E +P A +K C + Q+ + LR
Sbjct: 460 ----MGAYGEADALYRAMP-----EMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK 510
Query: 582 QGKGMGTFDIDMVNTFLSIFLAKGKLNLAC----KLFEIFTDMGVHPVNYTYNSMMSSFV 637
N + KG L+ A +L+E + +H +S+ ++
Sbjct: 511 SSVSAAV----CYNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGG 566
Query: 638 KKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLA----------------- 680
KG +G L ++ C + N I L K G + A
Sbjct: 567 DKGILGLVYG-LEQLNSDVC---LGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFP 622
Query: 681 STILDKL---MKQGGGYL-------------DVVMYNTLINVLGKAGRFDEANMLFEQMR 724
STIL L ++ YL DV+ Y +IN L K G +A L +
Sbjct: 623 STILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAK 682
Query: 725 TSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVT 769
+ G+ + +T+N+LI + G L EA + + G P+ VT
Sbjct: 683 SRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVT 727
Score = 110 bits (274), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 98/384 (25%), Positives = 174/384 (45%), Gaps = 23/384 (5%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + + C+ G +EE + N +++ V + + +++ K G +D A E+L +
Sbjct: 484 TYATMIKGYCKTGQIEEALEMFNELRKSSVSA-AVCYNRIIDALCKKGMLDTATEVLIEL 542
Query: 146 EELGTSLSPNVYDSVLVSLVR----KKQLGLAMSILFKLLEACNDNTADNSVVESLPGCV 201
E G L + ++L S+ K LGL + + C D ++ G
Sbjct: 543 WEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLEQLNSDVCLGMLNDAILLLCKRGSF 602
Query: 202 -ACNELLVALRKSDRRSEF-----KQVFERLKEQKEF------------EFDIYGYNICI 243
A E+ + +R+ F K + + L+ + D+ Y I I
Sbjct: 603 EAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDAYLLVVNAGETTLSSMDVIDYTIII 662
Query: 244 HAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHE 303
+ G L +L L K +G+ + TYNSLI LC G + +AL +++ L+ G
Sbjct: 663 NGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSLENIGLV 722
Query: 304 PNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQL 363
P+E T+ I+I CK DA K+ M GL+P+ ++YNS+++G K + +A ++
Sbjct: 723 PSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRV 782
Query: 364 FEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCR 423
+ + V +T + +I G + G E A ++F + K K D F ++ C
Sbjct: 783 VSRKMMGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCT 842
Query: 424 EGQIEEALRLVEEMEGRGFVVDLV 447
+G++EEA L+ EM VV L+
Sbjct: 843 KGRMEEARGLLREMLVSESVVKLI 866
Score = 87.4 bits (215), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 106/462 (22%), Positives = 197/462 (42%), Gaps = 34/462 (7%)
Query: 98 GFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNV- 156
G E +L +M E D+ D+ T+ +++ K+G+I+ A+E+ + + + +S+S V
Sbjct: 461 GAYGEADALYRAMPEMDLTPDTATYATMIKGYCKTGQIEEALEMFNELRK--SSVSAAVC 518
Query: 157 YDSVLVSLVRKKQLGLAMSILFKL---------------LEACNDNTADNSVV------E 195
Y+ ++ +L +K L A +L +L L + + N D ++ E
Sbjct: 519 YNRIIDALCKKGMLDTATEVLIELWEKGLYLDIHTSRTLLHSIHANGGDKGILGLVYGLE 578
Query: 196 SLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDI-YGYNICIHAFGCWGDLHT 254
L V L A+ +R F+ E + + + I L
Sbjct: 579 QLNSDVCLGMLNDAILLLCKRGSFEAAIEVYMIMRRKGLTVTFPSTILKTLVDNLRSLDA 638
Query: 255 SLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQ 314
L + + D+ Y +I LC G + AL + K G N T+ +I
Sbjct: 639 YLLVVNAGETTLSSMDVIDYTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLIN 698
Query: 315 GCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRT 374
G C+ + +A+++F ++ GL+P V Y L++ + K ++A +L + MV G+
Sbjct: 699 GLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVP 758
Query: 375 SCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFV-DGITFSIVVLQLCREGQIEEALRL 433
+ +N ++DG + G+ E A + K G+ D T S ++ C++G +EEAL +
Sbjct: 759 NIIIYNSIVDGYCKLGQTEDAMRVVSR-KMMGRVTPDAFTVSSMIKGYCKKGDMEEALSV 817
Query: 434 VEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMK 493
E + + D L+ GF GR + L++ + V+K V+A +
Sbjct: 818 FTEFKDKNISADFFGFLFLIKGFCTKGRMEEARGLLREMLVSE---SVVKLINRVDAELA 874
Query: 494 SRKSKRKDYTPMFPYKGDLSE---IMSLIGSTNLETDANLGS 532
+S R + +G + + I+ I ST + NLGS
Sbjct: 875 ESESIR-GFLVELCEQGRVPQAIKILDEISSTIYPSGKNLGS 915
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/231 (22%), Positives = 91/231 (39%), Gaps = 39/231 (16%)
Query: 239 YNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELK 298
Y I I G + +L M KGLVP++ YNS++ C +G+ +DA+ V
Sbjct: 728 YGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKM 787
Query: 299 GSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVM 358
P+ FT +I+G CK M++A+ +F+E + + D + L+ G ++
Sbjct: 788 MGRVTPDAFTVSSMIKGYCKKGDMEEALSVFTEFKDKNISADFFGFLFLIKGFCTKGRME 847
Query: 359 EACQLFEKMV-------------------------------QDGVRTSCWTHNILIDGLF 387
EA L +M+ Q V + + + ++
Sbjct: 848 EARGLLREMLVSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISSTIY 907
Query: 388 RNGRAEAAYTLFC--------DLKKKGKFVDGITFSIVVLQLCREGQIEEA 430
+G+ +Y ++KKK D + V LC G++E+A
Sbjct: 908 PSGKNLGSYQRLQFLNDVNEEEIKKKDYVHDFHSLHSTVSSLCTSGKLEQA 958
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 71/145 (48%), Gaps = 1/145 (0%)
Query: 629 YNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLM 688
Y +++ K+G+ +A + + + + TYN +I GL + G A + D L
Sbjct: 658 YTIIINGLCKEGFLVKALNLCSFAKSRGVTLNTITYNSLINGLCQQGCLVEALRLFDSL- 716
Query: 689 KQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRL 748
+ G V Y LI+ L K G F +A L + M + G+ P+++ +N++++ K G+
Sbjct: 717 ENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSMVSKGLVPNIIIYNSIVDGYCKLGQT 776
Query: 749 KEAHYFLKMMLDSGCTPNHVTDTTL 773
++A + + TP+ T +++
Sbjct: 777 EDAMRVVSRKMMGRVTPDAFTVSSM 801
Score = 38.9 bits (89), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 47/228 (20%), Positives = 90/228 (39%), Gaps = 27/228 (11%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
TY+ + +C+ G L E L +S++ +V T+ +L++ K G A ++LD M
Sbjct: 692 TYNSLINGLCQQGCLVEALRLFDSLENIGLVPSEVTYGILIDNLCKEGLFLDAEKLLDSM 751
Query: 146 EELGTSLSPN--VYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVAC 203
G L PN +Y+S++ + Q AM ++ + + P
Sbjct: 752 VSKG--LVPNIIIYNSIVDGYCKLGQTEDAMRVVSRKMMG-----------RVTPDAFTV 798
Query: 204 NELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEM- 262
+ ++ K E VF K+ K D +G+ I F G + + L +EM
Sbjct: 799 SSMIKGYCKKGDMEEALSVFTEFKD-KNISADFFGFLFLIKGFCTKGRMEEARGLLREML 857
Query: 263 ----------KEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGS 300
+ + + + + LC G+V A+ + +E+ +
Sbjct: 858 VSESVVKLINRVDAELAESESIRGFLVELCEQGRVPQAIKILDEISST 905
>sp|Q9FJE6|PP437_ARATH Putative pentatricopeptide repeat-containing protein At5g59900
OS=Arabidopsis thaliana GN=At5g59900 PE=3 SV=1
Length = 907
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 142/576 (24%), Positives = 256/576 (44%), Gaps = 35/576 (6%)
Query: 125 LLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEAC 184
L+E K GKI+ A+ ++ + + G S + VY++++ SL + ++ A +LF +
Sbjct: 338 LVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEA-ELLFDRMGKI 396
Query: 185 NDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKE--FEFDIYGYNIC 242
N V S+ + C RR + L E + + +Y YN
Sbjct: 397 G--LRPNDVTYSILIDMFC-----------RRGKLDTALSFLGEMVDTGLKLSVYPYNSL 443
Query: 243 IHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGH 302
I+ +GD+ + EM K L P + TY SL+ C GK+ AL ++ E+ G G
Sbjct: 444 INGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGI 503
Query: 303 EPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQ 362
P+ +T ++ G ++ + DA+K+F+EM + P+ V YN ++ G + + +A +
Sbjct: 504 APSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFE 563
Query: 363 LFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLC 422
++M + G+ +++ LI GL G+A A L K ++ I ++ ++ C
Sbjct: 564 FLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFC 623
Query: 423 REGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVL 482
REG++EEAL + +EM RG +DLV L+ G K+ L+K + D L D +
Sbjct: 624 REGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDV 683
Query: 483 KWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDEGS 542
+ + ++A KSK D+ F DL + + T G + +E
Sbjct: 684 IYTSMIDA-----KSKTGDFKEAFGI-WDLMINEGCVPNEVTYTAVINGLCKAGFVNEAE 737
Query: 543 QLTNSDEWSSSPYMDKLADQVKSDCHSSQL----FSLARGLRVQG---KGMGTFDIDMVN 595
L + + SS + +QV C L + + + + KG+ + N
Sbjct: 738 VLCSKMQPVSS-----VPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGL-LANTATYN 791
Query: 596 TFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEK 655
+ F +G++ A +L GV P TY +M++ ++ +A + N M EK
Sbjct: 792 MLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEK 851
Query: 656 FCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQG 691
D YN +I G G A+ + +++++QG
Sbjct: 852 GIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQG 887
Score = 141 bits (356), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 160/694 (23%), Positives = 283/694 (40%), Gaps = 65/694 (9%)
Query: 121 TFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKL 180
T LL +K A+E+ + M +G +Y V+ SL K L A ++ +
Sbjct: 194 TLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHM 253
Query: 181 -LEACNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGY 239
C+ N V N L+ L K + E + + L K+ + D+ Y
Sbjct: 254 EATGCDVNI------------VPYNVLIDGLCKKQKVWEAVGIKKDLA-GKDLKPDVVTY 300
Query: 240 NICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKG 299
++ + L + EM P +SL++ L GK+++AL + + +
Sbjct: 301 CTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVD 360
Query: 300 SGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVME 359
G PN F + +I CK + +A +F M GL P+ V Y+ L++ + K+
Sbjct: 361 FGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDT 420
Query: 360 ACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVL 419
A +MV G++ S + +N LI+G + G AA ++ K +T++ ++
Sbjct: 421 ALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMG 480
Query: 420 QLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVL 479
C +G+I +ALRL EM G+G + T ++LL G + G +L + + N+
Sbjct: 481 GYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKP 540
Query: 480 DVLKWKADVEATMKSRK-SKRKDYTPMFPYKGDLSEIMS---LIGSTNLETDANLGSGEG 535
+ + + +E + SK ++ KG + + S LI L A+
Sbjct: 541 NRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFV 600
Query: 536 DAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMV- 594
D +G+ N E + + + K + + S+ + + +G D+D+V
Sbjct: 601 DGLHKGNCELN--EICYTGLLHGFCREGKLE----EALSVCQEMVQRG-----VDLDLVC 649
Query: 595 -NTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMG 653
+ L L L + D G+ P + Y SM+ + K G F +A+G+ + M
Sbjct: 650 YGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709
Query: 654 EKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQG--------GGYLDVV------- 698
+ C + TY VI GL K G + A + K+ G +LD++
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDM 769
Query: 699 -------------------MYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLI 739
YN LI + GR +EA+ L +M G++PD +T+ T+I
Sbjct: 770 QKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMI 829
Query: 740 EVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
+ +K+A M + G P+ V TL
Sbjct: 830 NELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTL 863
Score = 140 bits (353), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 144/563 (25%), Positives = 240/563 (42%), Gaps = 30/563 (5%)
Query: 235 DIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVW 294
D+Y Y I + DL + + M+ G ++ YN LI LC KV +A+ +
Sbjct: 226 DVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIK 285
Query: 295 EELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKS 354
++L G +P+ T+ ++ G CK + +++ EM P +SL+ G+ K
Sbjct: 286 KDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKR 345
Query: 355 RKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITF 414
K+ EA L +++V GV + + +N LID L + + A LF + K G + +T+
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 415 SIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRD 474
SI++ CR G+++ AL + EM G + + +SL+ G K+G E M + +
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 475 GNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSG- 533
L V+ + + M SK K + Y E+ + ++ T L SG
Sbjct: 466 KKLEPTVVTYTS----LMGGYCSKGKINKALRLYH----EMTGKGIAPSIYTFTTLLSGL 517
Query: 534 --EGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHS---SQLFSLARGLRVQGKGMGT 588
G +D EW+ P ++ C S+ F + + +G T
Sbjct: 518 FRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDT 577
Query: 589 FDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVN-----YTYNSMMSSFVKKGYFN 643
+ + G+ + A ++F D G+H N Y ++ F ++G
Sbjct: 578 YS---YRPLIHGLCLTGQASEA----KVFVD-GLHKGNCELNEICYTGLLHGFCREGKLE 629
Query: 644 QAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTL 703
+A V EM ++ D+ Y V+I G K L +L K M G D V+Y ++
Sbjct: 630 EALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLL-KEMHDRGLKPDDVIYTSM 688
Query: 704 INVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGC 763
I+ K G F EA +++ M G P+ VT+ +I KAG + EA M
Sbjct: 689 IDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSS 748
Query: 764 TPNHVT-DTTLDFLGR-EIDRLK 784
PN VT LD L + E+D K
Sbjct: 749 VPNQVTYGCFLDILTKGEVDMQK 771
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 132/564 (23%), Positives = 237/564 (42%), Gaps = 53/564 (9%)
Query: 250 GDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTH 309
G + +L L K + + G+ P+L YN+LI LC K +A ++++ + G PN+ T+
Sbjct: 346 GKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTY 405
Query: 310 RIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQ 369
I+I C+ ++D A+ EM GL YNSL+NG K + A +M+
Sbjct: 406 SILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMIN 465
Query: 370 DGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEE 429
+ + T+ L+ G G+ A L+ ++ KG TF+ ++ L R G I +
Sbjct: 466 KKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRD 525
Query: 430 ALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVE 489
A++L EM + VT + ++ G+ + G +K + + +V D ++ +
Sbjct: 526 AVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIH 585
Query: 490 A-TMKSRKSKRKDYTPMFPYKG--DLSEIMSLIGSTNLETDANLGSGEGDAKDEGSQLTN 546
+ + S+ K + +KG +L+EI + L ++ + +
Sbjct: 586 GLCLTGQASEAKVFVDGL-HKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVD 644
Query: 547 SDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAK-- 604
D +D S H + + +G+ D+ + S+ AK
Sbjct: 645 LDLVCYGVLIDG------SLKHKDRKLFFGLLKEMHDRGLKPDDV----IYTSMIDAKSK 694
Query: 605 -GKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEM----------- 652
G A ++++ + G P TY ++++ K G+ N+A + ++M
Sbjct: 695 TGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVT 754
Query: 653 ----------GE--------------KFCPTDIATYNVVIQGLGKMGRADLASTILDKLM 688
GE K + ATYN++I+G + GR + AS ++ +++
Sbjct: 755 YGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRGFCRQGRIEEASELITRMI 814
Query: 689 KQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRL 748
G D + Y T+IN L + +A L+ M GI PD V +NTLI AG +
Sbjct: 815 GDGVSP-DCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEM 873
Query: 749 KEAHYFLKMMLDSGCTPNHVTDTT 772
+A ML G PN+ T T
Sbjct: 874 GKATELRNEMLRQGLIPNNKTSRT 897
Score = 131 bits (329), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 128/536 (23%), Positives = 216/536 (40%), Gaps = 68/536 (12%)
Query: 304 PNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQL 363
P T ++ G K AM++F++M G+ PD +Y ++ + + + + A ++
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249
Query: 364 FEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCR 423
M G + +N+LIDGL + + A + DL K D +T+ +V LC+
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309
Query: 424 EGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLK 483
+ E L +++EM F +SSL+ G K G+ + L+K + D + ++
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369
Query: 484 WKADVEATMKSRKS---------------KRKDYT-----PMFPYKGDLSEIMSLIGS-- 521
+ A +++ K RK + D T MF +G L +S +G
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429
Query: 522 -TNLETDA----NLGSGE---GDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLF 573
T L+ +L +G GD + P + + C ++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489
Query: 574 SLARGLR-VQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSM 632
R + GKG+ I T LS G + A KLF + V P TYN M
Sbjct: 490 KALRLYHEMTGKGIAP-SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVM 548
Query: 633 MSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGG 692
+ + ++G ++A+ L EM EK D +Y +I GL G+A A +D L K G
Sbjct: 549 IEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHK-GN 607
Query: 693 GYLDVVMYNTLINVLGKAGRFDEANM---------------------------------- 718
L+ + Y L++ + G+ +EA
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 719 -LFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHVTDTTL 773
L ++M G+ PD V + ++I+ K G KEA +M++ GC PN VT T +
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAV 723
Score = 108 bits (269), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 93/393 (23%), Positives = 162/393 (41%), Gaps = 47/393 (11%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
T++ + + RAG + + L N M E +V + T+ +++E + G + A E L M
Sbjct: 509 TFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEM 568
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
E G Y ++ L Q A + L + N N + +
Sbjct: 569 TEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKG---NCELNEICYT--------G 617
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
LL + + E V + + Q+ + D+ Y + I D L KEM ++
Sbjct: 618 LLHGFCREGKLEEALSVCQEMV-QRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDR 676
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
GL PD Y S+I G K+A +W+ + G PNE T+ +I G CK+ +++A
Sbjct: 677 GLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEA 736
Query: 326 MKIFSEMQ-----------------------------------YNGLIPDTVVYNSLLNG 350
+ S+MQ GL+ +T YN L+ G
Sbjct: 737 EVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLIRG 796
Query: 351 MFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVD 410
+ ++ EA +L +M+ DGV C T+ +I+ L R + A L+ + +KG D
Sbjct: 797 FCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIRPD 856
Query: 411 GITFSIVVLQLCREGQIEEALRLVEEMEGRGFV 443
+ ++ ++ C G++ +A L EM +G +
Sbjct: 857 RVAYNTLIHGCCVAGEMGKATELRNEMLRQGLI 889
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 85/392 (21%), Positives = 173/392 (44%), Gaps = 25/392 (6%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
Y+ + ++C+ E L + M + + + T+ +L++ + GK+D A+ L M
Sbjct: 369 VYNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEM 428
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNT------------ADNSV 193
+ G LS Y+S++ + + A + +++ + T + +
Sbjct: 429 VDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKI 488
Query: 194 VESL------------PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNI 241
++L P LL L ++ + ++F + E + + YN+
Sbjct: 489 NKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWN-VKPNRVTYNV 547
Query: 242 CIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSG 301
I + GD+ + KEM EKG+VPD ++Y LI LC+ G+ +A + + L
Sbjct: 548 MIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGN 607
Query: 302 HEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEAC 361
E NE + ++ G C+ ++++A+ + EM G+ D V Y L++G K +
Sbjct: 608 CELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFF 667
Query: 362 QLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQL 421
L ++M G++ + +ID + G + A+ ++ + +G + +T++ V+ L
Sbjct: 668 GLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGL 727
Query: 422 CREGQIEEALRLVEEMEGRGFVVDLVTISSLL 453
C+ G + EA L +M+ V + VT L
Sbjct: 728 CKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFL 759
Score = 70.9 bits (172), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 67/277 (24%), Positives = 109/277 (39%), Gaps = 23/277 (8%)
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
Y+ + CR G LEE S+ M + V +D + +L++ +K +L M
Sbjct: 615 YTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMH 674
Query: 147 ELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLL-EACNDNTAD-NSVVESLPGCVACN 204
+ G +Y S++ + + A I ++ E C N +V+ L N
Sbjct: 675 DRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVN 734
Query: 205 ELLVALRKSDRRSE---------FKQVFER--LKEQKEFEF----------DIYGYNICI 243
E V K S F + + + QK E + YN+ I
Sbjct: 735 EAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKAVELHNAILKGLLANTATYNMLI 794
Query: 244 HAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHE 303
F G + + L M G+ PD TY ++I LC VK A+ +W + G
Sbjct: 795 RGFCRQGRIEEASELITRMIGDGVSPDCITYTTMINELCRRNDVKKAIELWNSMTEKGIR 854
Query: 304 PNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPD 340
P+ + +I GCC + M A ++ +EM GLIP+
Sbjct: 855 PDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPN 891
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 66/284 (23%), Positives = 104/284 (36%), Gaps = 62/284 (21%)
Query: 32 LKESGTRNLDPRSIPISEPLVLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTAC-----T 86
LKE R L P V+ + +D+ K F+ + + + C T
Sbjct: 670 LKEMHDRGLKPD----------DVIYTSMIDAKSKTGDFKEAFGIWDLMINEGCVPNEVT 719
Query: 87 YSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYME 146
Y+ + +C+AGF+ E L + MQ V + T+ L+ K G++D
Sbjct: 720 YTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTK-GEVDM--------- 769
Query: 147 ELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNEL 206
+K + L +IL LL NTA N L
Sbjct: 770 --------------------QKAVELHNAILKGLLA----NTATY------------NML 793
Query: 207 LVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKG 266
+ + R E ++ R+ D Y I+ D+ ++ L+ M EKG
Sbjct: 794 IRGFCRQGRIEEASELITRMIGDG-VSPDCITYTTMINELCRRNDVKKAIELWNSMTEKG 852
Query: 267 LVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHR 310
+ PD YN+LI CV G++ A + E+ G PN T R
Sbjct: 853 IRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIPNNKTSR 896
>sp|Q5G1S8|PP241_ARATH Pentatricopeptide repeat-containing protein At3g18110,
chloroplastic OS=Arabidopsis thaliana GN=EMB1270 PE=2
SV=2
Length = 1440
Score = 144 bits (364), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 164/738 (22%), Positives = 303/738 (41%), Gaps = 74/738 (10%)
Query: 40 LDPRSI---PISEPLVLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCR 96
LD R + P V++ +G+ S + L+ F W + LR + A + I + R
Sbjct: 147 LDARLVQMTPTDYCFVVKSVGQESWQ--RALEVFEWLN-LRHWHSPNARMVAAILGVLGR 203
Query: 97 AGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYMEELGTSLSPNV 156
E + + + E V + + ++ +SGK A E++D M + G P++
Sbjct: 204 WN-QESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMRQRGCV--PDL 260
Query: 157 YDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNELLVALRKSDRR 216
+ R K GL ++ +LL+ ++ P + N LL A +
Sbjct: 261 ISFNTLINARLKSGGLTPNLAVELLDMVRNSGLR-------PDAITYNTLLSACSRDSNL 313
Query: 217 SEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNS 276
+VFE + E + D++ YN I +G G + RLF E++ KG PD TYNS
Sbjct: 314 DGAVKVFEDM-EAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAVTYNS 372
Query: 277 LIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQ-YN 335
L+ + V+++++ G +E T+ II K ++D A++++ +M+ +
Sbjct: 373 LLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLS 432
Query: 336 GLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAA 395
G PD + Y L++ + K+ + +EA L +M+ G++ + T++ LI G + G+ E A
Sbjct: 433 GRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEA 492
Query: 396 YTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIG 455
F + + G D + +S+++ L R + +A L +M G +++G
Sbjct: 493 EDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYTLYELMILG 552
Query: 456 FHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEI 515
K R D D++ T++ D+ E
Sbjct: 553 LMKENRSD-----------------------DIQKTIR-----------------DMEE- 571
Query: 516 MSLIGSTNLETDANLGSGEG---DAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQL 572
L G LE + L GE A+ +TN E + + L S H S+
Sbjct: 572 --LCGMNPLEISSVLVKGECFDLAARQLKVAITNGYELENDTLLSILGSYSSSGRH-SEA 628
Query: 573 FSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNY----T 628
F L L+ G ++ L + K NL+ L E F D VH +
Sbjct: 629 FELLEFLKEHASGSKR----LITEALIVLHCKVN-NLSAALDEYFADPCVHGWCFGSSTM 683
Query: 629 YNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLM 688
Y +++ V ++ +A V +++ C + ++ K+G + A ++++
Sbjct: 684 YETLLHCCVANEHYAEASQVFSDLRLSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAE 743
Query: 689 KQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRL 748
+G + MY +I GK + +A + +R SG PD+ T+N+L+ + G
Sbjct: 744 TKGFHFACSPMYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCY 803
Query: 749 KEAHYFLKMMLDSGCTPN 766
+ A M+ G +P
Sbjct: 804 ERARAIFNTMMRDGPSPT 821
Score = 123 bits (309), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 167/739 (22%), Positives = 320/739 (43%), Gaps = 68/739 (9%)
Query: 52 VLQVLGKNSLDSSKKLDFFRWCSSLRPIYKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQ 111
+L VLG+ + +S F R P Y+ + R+G + L+++M+
Sbjct: 197 ILGVLGRWNQESLAVEIFTR----AEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVDAMR 252
Query: 112 EDDVVVDSETFKLLLEPCIKSGKI--DFAIEILDYMEELGTSLSPNVYDSVLVSLVRKKQ 169
+ V D +F L+ +KSG + + A+E+LD + G Y+++L + R
Sbjct: 253 QRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPDAITYNTLLSACSRDSN 312
Query: 170 LGLAMSILFKLLEA--CNDNTADNSVVESLPGCVACNELLVALRKSDRRSEFKQVFERLK 227
L A+ + F+ +EA C P N ++ + +E +++F L
Sbjct: 313 LDGAVKV-FEDMEAHRCQ------------PDLWTYNAMISVYGRCGLAAEAERLFMEL- 358
Query: 228 EQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKV 287
E K F D YN ++AF + ++++M++ G D TYN++I + G++
Sbjct: 359 ELKGFFPDAVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQL 418
Query: 288 KDALIVWEELKG-SGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNS 346
AL +++++KG SG P+ T+ ++I K+ R +A + SEM G+ P Y++
Sbjct: 419 DLALQLYKDMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKPTLQTYSA 478
Query: 347 LLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKG 406
L+ G K+ K EA F M++ G + +++++D L R A+ L+ D+ G
Sbjct: 479 LICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDG 538
Query: 407 KFVDGITFSIVVLQLCREGQ---IEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWD 463
+ +++L L +E + I++ +R +EE+ G ++ + ISS+L+ K +D
Sbjct: 539 HTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCG----MNPLEISSVLV---KGECFD 591
Query: 464 FTERLMK-HIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGST 522
R +K I +G + + D ++ S ++ F L E S GS
Sbjct: 592 LAARQLKVAITNG------YELENDTLLSILGSYSSSGRHSEAFELLEFLKEHAS--GSK 643
Query: 523 NLETDA---------NLGSGEGDAKDEGSQLTNSDEW---SSSPYMDKLADQVKSD--CH 568
L T+A NL + A DE W SS+ Y L V ++
Sbjct: 644 RLITEALIVLHCKVNNLSA----ALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAE 699
Query: 569 SSQLFSLARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVH-PVNY 627
+SQ+FS LR+ G + + + ++ G A ++ G H +
Sbjct: 700 ASQVFS---DLRLSGCEASE---SVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSP 753
Query: 628 TYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKL 687
Y ++ ++ K+ + +A V+ + + D+ T+N ++ + G + A I + +
Sbjct: 754 MYTDIIEAYGKQKLWQKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTM 813
Query: 688 MKQGGGYLDVVMYNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGR 747
M+ G V N L++ L GR +E ++ E+++ G + +++ +AG
Sbjct: 814 MRDGPSP-TVESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGN 872
Query: 748 LKEAHYFLKMMLDSGCTPN 766
+ E M +G P
Sbjct: 873 IFEVKKIYSSMKAAGYLPT 891
Score = 88.2 bits (217), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 93/193 (48%), Gaps = 7/193 (3%)
Query: 590 DIDMVNTFLSIFLAKGKLNLACKLFEIFTDM---GVHPVNYTYNSMMSSFVKKGYFNQAW 646
D+ N +S++ G+ LA + +F ++ G P TYNS++ +F ++ +
Sbjct: 331 DLWTYNAMISVY---GRCGLAAEAERLFMELELKGFFPDAVTYNSLLYAFARERNTEKVK 387
Query: 647 GVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINV 706
V +M + D TYN +I GK G+ DLA + + G D + Y LI+
Sbjct: 388 EVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNPDAITYTVLIDS 447
Query: 707 LGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPN 766
LGKA R EA L +M GI P + T++ LI KAG+ +EA ML SG P+
Sbjct: 448 LGKANRTVEAAALMSEMLDVGIKPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPD 507
Query: 767 HVT-DTTLDFLGR 778
++ LD L R
Sbjct: 508 NLAYSVMLDVLLR 520
Score = 85.5 bits (210), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/303 (24%), Positives = 143/303 (47%), Gaps = 11/303 (3%)
Query: 198 PGCVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLR 257
P + N LL AL R E V E L++ F+ + + AF G++ +
Sbjct: 820 PTVESINILLHALCVDGRLEELYVVVEELQDMG-FKISKSSILLMLDAFARAGNIFEVKK 878
Query: 258 LFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCC 317
++ MK G +P + Y +I++LC +V+DA I+ E++ E N I
Sbjct: 879 IYSSMKAAGYLPTIRLYRMMIELLCKGKRVRDAEIMVSEME----EANFKVELAIWNSML 934
Query: 318 KSYR-MDD---AMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVR 373
K Y ++D ++++ ++ GL PD YN+L+ + R+ E L ++M G+
Sbjct: 935 KMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD 994
Query: 374 TSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCRE-GQIEEALR 432
T+ LI + E A LF +L KG +D +F ++++ R+ G +A +
Sbjct: 995 PKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDR-SFYHTMMKISRDSGSDSKAEK 1053
Query: 433 LVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATM 492
L++ M+ G L T+ L++ + G E+++ +++D + L L + + ++A +
Sbjct: 1054 LLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYL 1113
Query: 493 KSR 495
+S+
Sbjct: 1114 RSK 1116
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 88/185 (47%), Gaps = 8/185 (4%)
Query: 593 MVNTFLSIFLAKGKLNLACKLFEIFT--DMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLN 650
MV L + G+ N EIFT + V YN+MM + + G F++A +++
Sbjct: 193 MVAAILGVL---GRWNQESLAVEIFTRAEPTVGDRVQVYNAMMGVYSRSGKFSKAQELVD 249
Query: 651 EMGEKFCPTDIATYNVVIQGLGKMG--RADLASTILDKLMKQGGGYLDVVMYNTLINVLG 708
M ++ C D+ ++N +I K G +LA +LD +++ G D + YNTL++
Sbjct: 250 AMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLD-MVRNSGLRPDAITYNTLLSACS 308
Query: 709 KAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHV 768
+ D A +FE M PD+ T+N +I V G+ G EA + G P+ V
Sbjct: 309 RDSNLDGAVKVFEDMEAHRCQPDLWTYNAMISVYGRCGLAAEAERLFMELELKGFFPDAV 368
Query: 769 TDTTL 773
T +L
Sbjct: 369 TYNSL 373
Score = 77.0 bits (188), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 53/246 (21%), Positives = 115/246 (46%)
Query: 235 DIYGYNICIHAFGCWGDLHTSLRLFKEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVW 294
D+ +N + A+ G + +F M G P + + N L+ LCV G++++ +V
Sbjct: 786 DLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVV 845
Query: 295 EELKGSGHEPNEFTHRIIIQGCCKSYRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKS 354
EEL+ G + ++ + +++ ++ + + KI+S M+ G +P +Y ++ + K
Sbjct: 846 EELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKG 905
Query: 355 RKVMEACQLFEKMVQDGVRTSCWTHNILIDGLFRNGRAEAAYTLFCDLKKKGKFVDGITF 414
++V +A + +M + + N ++ + ++ +K+ G D T+
Sbjct: 906 KRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTY 965
Query: 415 SIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRWDFTERLMKHIRD 474
+ +++ CR+ + EE L+++M G L T SL+ F K + E+L + +
Sbjct: 966 NTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLS 1025
Query: 475 GNLVLD 480
L LD
Sbjct: 1026 KGLKLD 1031
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/360 (18%), Positives = 158/360 (43%), Gaps = 12/360 (3%)
Query: 86 TYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILDYM 145
T++ + + G E ++ N+M D E+ +LL G+++ +++ +
Sbjct: 789 TWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEEL 848
Query: 146 EELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVACNE 205
+++G +S + +L + R + + ++ ++A LP +
Sbjct: 849 QDMGFKISKSSILLMLDAFARAGNI-FEVKKIYSSMKAAG----------YLP-TIRLYR 896
Query: 206 LLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEMKEK 265
+++ L +R ++ E+ F+ ++ +N + + D ++++++ +KE
Sbjct: 897 MMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTVQVYQRIKET 956
Query: 266 GLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKSYRMDDA 325
GL PD TYN+LI + C + ++ ++ ++++ G +P T++ +I K ++ A
Sbjct: 957 GLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQA 1016
Query: 326 MKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNILIDG 385
++F E+ GL D Y++++ S +A +L + M G+ + T ++L+
Sbjct: 1017 EQLFEELLSKGLKLDRSFYHTMMKISRDSGSDSKAEKLLQMMKNAGIEPTLATMHLLMVS 1076
Query: 386 LFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVD 445
+G + A + +LK + + +S V+ R + + EM+ G D
Sbjct: 1077 YSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRSKDYNSGIERLLEMKKEGLEPD 1136
Score = 73.2 bits (178), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 134/663 (20%), Positives = 252/663 (38%), Gaps = 94/663 (14%)
Query: 81 KHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIE 140
K T TYS + +AG EE + M D+ + ++L+ ++ + A
Sbjct: 470 KPTLQTYSALICGYAKAGKREEAEDTFSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWG 529
Query: 141 ILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGC 200
+ M G + S +Y+ +++ L+++ + + + E C N + S V C
Sbjct: 530 LYRDMISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEELCGMNPLEISSVLVKGEC 589
Query: 201 --VACNELLVAL------------------RKSDRRSEFKQVFERLKEQKE--------- 231
+A +L VA+ S R SE ++ E LKE
Sbjct: 590 FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLITEA 649
Query: 232 ------------FEFDIYGYNICIHAFGCWGD-------LHTSL---------RLFKEMK 263
D Y + C+H + C+G LH + ++F +++
Sbjct: 650 LIVLHCKVNNLSAALDEYFADPCVHGW-CFGSSTMYETLLHCCVANEHYAEASQVFSDLR 708
Query: 264 EKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSG-HEPNEFTHRIIIQGCCKSYRM 322
G S++ V C +G + A V + + G H + II+ K
Sbjct: 709 LSGCEASESVCKSMVVVYCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQKLW 768
Query: 323 DDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKMVQDGVRTSCWTHNIL 382
A + ++ +G PD +NSL++ + A +F M++DG + + NIL
Sbjct: 769 QKAESVVGNLRQSGRTPDLKTWNSLMSAYAQCGCYERARAIFNTMMRDGPSPTVESINIL 828
Query: 383 IDGLFRNGRAEAAYTLFCDLKKKGKFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGF 442
+ L +GR E Y + +L+ G + + +++ R G I E ++ M+ G+
Sbjct: 829 LHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYSSMKAAGY 888
Query: 443 VVDLVTISSLLIGFHKYGRWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDY 502
+ + + ++I G K +RD +++ ++ +A+ + + S K Y
Sbjct: 889 -LPTIRLYRMMIELLCKG---------KRVRDAEIMVSEME-EANFKVELAIWNSMLKMY 937
Query: 503 TPMFPYKGDLSEIMSLIGSTNLETDANLGSG------EGDAKDEGSQLTNS-DEWSSSPY 555
T + YK + ++ I T LE D + +EG L P
Sbjct: 938 TAIEDYKKTV-QVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPK 996
Query: 556 MDKLADQV----KSDC--HSSQLFS--LARGLRVQGKGMGTFDIDMVNTFLSIFLAKGKL 607
+D + K C + QLF L++GL++ D +T + I G
Sbjct: 997 LDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKL--------DRSFYHTMMKISRDSGSD 1048
Query: 608 NLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVV 667
+ A KL ++ + G+ P T + +M S+ G +A VL+ + + Y+ V
Sbjct: 1049 SKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSV 1108
Query: 668 IQG 670
I
Sbjct: 1109 IDA 1111
Score = 65.1 bits (157), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/349 (21%), Positives = 141/349 (40%), Gaps = 44/349 (12%)
Query: 423 REGQIEEALRLVEEMEGRGFVVDLVTISSLLIGFHKYGRW--DFTERLMKHIRDGNLVLD 480
R G+ +A LV+ M RG V DL++ ++L+ K G + L+ +R+ L D
Sbjct: 237 RSGKFSKAQELVDAMRQRGCVPDLISFNTLINARLKSGGLTPNLAVELLDMVRNSGLRPD 296
Query: 481 VLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIGSTNLETDANLGSGEGDAKDE 540
+ + + A + D+NL +D
Sbjct: 297 AITYNTLLSACSR---------------------------------DSNLDGAVKVFEDM 323
Query: 541 GSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLRVQGKGMGTFDIDMVNTFLSI 600
+ D W+ + M + + + +LF + ++ KG D N+ L
Sbjct: 324 EAHRCQPDLWTYNA-MISVYGRCGLAAEAERLF-----MELELKGFFP-DAVTYNSLLYA 376
Query: 601 FLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLNEM-GEKFCPT 659
F + ++++ MG TYN+++ + K+G + A + +M G
Sbjct: 377 FARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYKDMKGLSGRNP 436
Query: 660 DIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGKAGRFDEANML 719
D TY V+I LGK R A+ ++ +++ G + Y+ LI KAG+ +EA
Sbjct: 437 DAITYTVLIDSLGKANRTVEAAALMSEMLDVGIKP-TLQTYSALICGYAKAGKREEAEDT 495
Query: 720 FEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTPNHV 768
F M SG PD + ++ +++V + ++A + M+ G TP++
Sbjct: 496 FSCMLRSGTKPDNLAYSVMLDVLLRGNETRKAWGLYRDMISDGHTPSYT 544
Score = 57.0 bits (136), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/172 (20%), Positives = 81/172 (47%), Gaps = 1/172 (0%)
Query: 590 DIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVL 649
++ + N+ L ++ A ++++ + G+ P TYN+++ + + + + ++
Sbjct: 926 ELAIWNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLM 985
Query: 650 NEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGK 709
+M + TY +I GK + A + ++L+ +G LD Y+T++ +
Sbjct: 986 QQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLK-LDRSFYHTMMKISRD 1044
Query: 710 AGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDS 761
+G +A L + M+ +GI P + T + L+ +G +EA L + D+
Sbjct: 1045 SGSDSKAEKLLQMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDT 1096
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 145/723 (20%), Positives = 276/723 (38%), Gaps = 106/723 (14%)
Query: 84 ACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAIEILD 143
A TY+ + R E+V + MQ+ D T+ ++ K G++D A+++
Sbjct: 367 AVTYNSLLYAFARERNTEKVKEVYQQMQKMGFGKDEMTYNTIIHMYGKQGQLDLALQLYK 426
Query: 144 YMEEL-GTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPGCVA 202
M+ L G + Y ++ SL + + A +++ ++L+ V P
Sbjct: 427 DMKGLSGRNPDAITYTVLIDSLGKANRTVEAAALMSEMLD-----------VGIKPTLQT 475
Query: 203 CNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLFKEM 262
+ L+ K+ +R E + F + + D Y++ + + + L+++M
Sbjct: 476 YSALICGYAKAGKREEAEDTFSCMLRSGT-KPDNLAYSVMLDVLLRGNETRKAWGLYRDM 534
Query: 263 KEKGLVPDLHTYNSLIQVLCVVGK---VKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS 319
G P Y +I L + ++ + EEL G P E + ++++G C
Sbjct: 535 ISDGHTPSYTLYELMILGLMKENRSDDIQKTIRDMEEL--CGMNPLEISS-VLVKGEC-- 589
Query: 320 YRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFE----------KMVQ 369
D A + NG + S+L S + EA +L E +++
Sbjct: 590 --FDLAARQLKVAITNGYELENDTLLSILGSYSSSGRHSEAFELLEFLKEHASGSKRLIT 647
Query: 370 DG-----------------------VRTSCWTHNILIDGLFR----NGRAEAAYTLFCDL 402
+ V C+ + + + L N A +F DL
Sbjct: 648 EALIVLHCKVNNLSAALDEYFADPCVHGWCFGSSTMYETLLHCCVANEHYAEASQVFSDL 707
Query: 403 KKKG-KFVDGITFSIVVLQLCREGQIEEALRLVEEMEGRGFVVDLVTISSLLI-GFHKYG 460
+ G + + + S+VV+ C+ G E A ++V + E +GF + + +I + K
Sbjct: 708 RLSGCEASESVCKSMVVV-YCKLGFPETAHQVVNQAETKGFHFACSPMYTDIIEAYGKQK 766
Query: 461 RWDFTERLMKHIRDGNLVLDVLKWKADVEATMKSRKSKRKDYTPMFPYKGDLSEIMSLIG 520
W E ++ GNL R+S R TP DL SL+
Sbjct: 767 LWQKAESVV-----GNL-----------------RQSGR---TP------DLKTWNSLMS 795
Query: 521 STNLETDANLGSGEGDAKDEGSQLTNSDEWSSSPYMDKLADQVKSDCHSSQLFSLARGLR 580
+ A G E A+ + + + ++ L + D +L+ + L+
Sbjct: 796 AY-----AQCGCYE-RARAIFNTMMRDGPSPTVESINILLHALCVDGRLEELYVVVEELQ 849
Query: 581 VQGKGMGTFDIDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKG 640
G + I ++ L F G + K++ G P Y M+ K
Sbjct: 850 DMGFKISKSSILLM---LDAFARAGNIFEVKKIYSSMKAAGYLPTIRLYRMMIELLCKGK 906
Query: 641 YFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTI-LDKLMKQGGGYLDVVM 699
A +++EM E ++A +N +++ + D T+ + + +K+ G D
Sbjct: 907 RVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAI--EDYKKTVQVYQRIKETGLEPDETT 964
Query: 700 YNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMML 759
YNTLI + + R +E +L +QMR G++P + T+ +LI GK L++A + +L
Sbjct: 965 YNTLIIMYCRDRRPEEGYLLMQQMRNLGLDPKLDTYKSLISAFGKQKCLEQAEQLFEELL 1024
Query: 760 DSG 762
G
Sbjct: 1025 SKG 1027
Score = 53.5 bits (127), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 84/176 (47%), Gaps = 3/176 (1%)
Query: 591 IDMVNTFLSIFLAKGKLNLACKLFEIFTDMGVHPVNYTYNSMMSSFVKKGYFNQAWGVLN 650
++ +N L G+L + E DMG + M+ +F + G + + +
Sbjct: 822 VESINILLHALCVDGRLEELYVVVEELQDMGFKISKSSILLMLDAFARAGNIFEVKKIYS 881
Query: 651 EM-GEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLMKQGGGYLDVVMYNTLINVLGK 709
M + PT I Y ++I+ L K R A ++ + M++ +++ ++N+++ +
Sbjct: 882 SMKAAGYLPT-IRLYRMMIELLCKGKRVRDAEIMVSE-MEEANFKVELAIWNSMLKMYTA 939
Query: 710 AGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAGRLKEAHYFLKMMLDSGCTP 765
+ + ++++++ +G+ PD T+NTLI + + R +E + ++ M + G P
Sbjct: 940 IEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLDP 995
Score = 49.7 bits (117), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Query: 629 YNSMMSSFVKKGYFNQAWGVLNEMGEKFCPTDIATYNVVIQGLGKMGRADLASTILDKLM 688
+NSM+ + + + V + E D TYN +I + R + ++ ++
Sbjct: 930 WNSMLKMYTAIEDYKKTVQVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMR 989
Query: 689 KQGGGYLDVVM--YNTLINVLGKAGRFDEANMLFEQMRTSGINPDVVTFNTLIEVNGKAG 746
G LD + Y +LI+ GK ++A LFE++ + G+ D ++T+++++ +G
Sbjct: 990 NLG---LDPKLDTYKSLISAFGKQKCLEQAEQLFEELLSKGLKLDRSFYHTMMKISRDSG 1046
Query: 747 RLKEAHYFLKMMLDSGCTPNHVT 769
+A L+MM ++G P T
Sbjct: 1047 SDSKAEKLLQMMKNAGIEPTLAT 1069
Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 50/288 (17%), Positives = 111/288 (38%), Gaps = 12/288 (4%)
Query: 80 YKHTACTYSHIFRTVCRAGFLEEVPSLLNSMQEDDVVVDSETFKLLLEPCIKSGKIDFAI 139
Y T Y + +C+ + + +++ M+E + V+ + +L+ +
Sbjct: 888 YLPTIRLYRMMIELLCKGKRVRDAEIMVSEMEEANFKVELAIWNSMLKMYTAIEDYKKTV 947
Query: 140 EILDYMEELGTSLSPNVYDSVLVSLVRKKQLGLAMSILFKLLEACNDNTADNSVVESLPG 199
++ ++E G Y+++++ R ++ ++ ++ D P
Sbjct: 948 QVYQRIKETGLEPDETTYNTLIIMYCRDRRPEEGYLLMQQMRNLGLD-----------PK 996
Query: 200 CVACNELLVALRKSDRRSEFKQVFERLKEQKEFEFDIYGYNICIHAFGCWGDLHTSLRLF 259
L+ A K + +Q+FE L K + D Y+ + G + +L
Sbjct: 997 LDTYKSLISAFGKQKCLEQAEQLFEELL-SKGLKLDRSFYHTMMKISRDSGSDSKAEKLL 1055
Query: 260 KEMKEKGLVPDLHTYNSLIQVLCVVGKVKDALIVWEELKGSGHEPNEFTHRIIIQGCCKS 319
+ MK G+ P L T + L+ G ++A V LK + E + +I +S
Sbjct: 1056 QMMKNAGIEPTLATMHLLMVSYSSSGNPQEAEKVLSNLKDTEVELTTLPYSSVIDAYLRS 1115
Query: 320 YRMDDAMKIFSEMQYNGLIPDTVVYNSLLNGMFKSRKVMEACQLFEKM 367
+ ++ EM+ GL PD ++ + S++ +E L + +
Sbjct: 1116 KDYNSGIERLLEMKKEGLEPDHRIWTCFVRAASFSKEKIEVMLLLKAL 1163
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.406
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 290,860,983
Number of Sequences: 539616
Number of extensions: 12593972
Number of successful extensions: 41463
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 413
Number of HSP's successfully gapped in prelim test: 77
Number of HSP's that attempted gapping in prelim test: 28330
Number of HSP's gapped (non-prelim): 5635
length of query: 790
length of database: 191,569,459
effective HSP length: 126
effective length of query: 664
effective length of database: 123,577,843
effective search space: 82055687752
effective search space used: 82055687752
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)