Query 003874
Match_columns 790
No_of_seqs 544 out of 2369
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 06:52:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003874.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003874hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dmh_A Myoferlin; beta-sandwic 99.8 4E-19 1.4E-23 168.8 16.1 125 300-426 5-135 (140)
2 3kwu_A MUNC13-1; calcium bindi 99.8 8.9E-19 3E-23 168.2 18.3 121 299-423 14-146 (148)
3 2fk9_A Protein kinase C, ETA t 99.8 1.8E-19 6E-24 174.8 13.4 117 298-423 25-156 (157)
4 2ep6_A MCTP2 protein; beta san 99.8 9.1E-19 3.1E-23 165.0 15.2 121 298-422 9-130 (133)
5 1wfj_A Putative elicitor-respo 99.8 9E-19 3.1E-23 165.6 12.7 124 299-426 7-132 (136)
6 1gmi_A Protein kinase C, epsil 99.8 8.9E-19 3E-23 165.9 12.4 117 300-425 4-134 (136)
7 1rlw_A Phospholipase A2, CALB 99.8 1.6E-18 5.4E-23 161.6 13.6 117 301-425 2-124 (126)
8 3b7y_A E3 ubiquitin-protein li 99.8 6.4E-18 2.2E-22 163.1 15.2 122 299-422 17-151 (153)
9 3m7f_B E3 ubiquitin-protein li 99.8 9.4E-18 3.2E-22 166.1 16.3 125 299-425 5-142 (176)
10 2b3r_A Phosphatidylinositol-4- 99.7 1E-17 3.6E-22 158.3 12.5 109 297-407 15-131 (134)
11 3pyc_A E3 ubiquitin-protein li 99.7 2.9E-17 9.8E-22 154.5 15.1 119 301-422 4-131 (132)
12 1rsy_A Synaptotagmin I; calciu 99.7 4.1E-17 1.4E-21 157.4 12.7 108 298-406 38-150 (152)
13 3f04_A Synaptotagmin-1; C2A, c 99.7 3.1E-17 1.1E-21 156.4 11.5 107 299-406 31-142 (143)
14 3fdw_A Synaptotagmin-like prot 99.7 1.4E-17 4.8E-22 159.9 8.6 110 299-409 20-137 (148)
15 2z0u_A WW domain-containing pr 99.7 1.5E-17 5.2E-22 161.2 8.7 107 298-405 39-154 (155)
16 2d8k_A Synaptotagmin VII; exoc 99.7 5.2E-17 1.8E-21 154.6 11.7 108 300-408 24-137 (141)
17 2bwq_A Regulating synaptic mem 99.7 5.7E-17 1.9E-21 151.6 11.1 105 299-405 15-129 (129)
18 1v27_A Regulating synaptic mem 99.7 5E-17 1.7E-21 154.3 10.1 107 300-408 19-135 (141)
19 1a25_A CALB, protein kinase C 99.7 5.4E-17 1.9E-21 156.0 10.0 105 301-407 30-140 (149)
20 1rh8_A Piccolo protein; beta-s 99.7 2E-17 6.9E-22 157.4 6.8 106 301-407 17-139 (142)
21 2nq3_A Itchy homolog E3 ubiqui 99.7 1.3E-16 4.4E-21 157.6 12.8 119 300-421 34-158 (173)
22 3rdl_A Protein kinase C alpha 99.7 1E-16 3.4E-21 151.4 11.2 105 301-407 15-125 (137)
23 2q3x_A Regulating synaptic mem 99.7 1.3E-16 4.3E-21 157.3 11.3 106 301-408 29-141 (171)
24 2chd_A Rabphilin-3A, exophilin 99.7 1.4E-16 4.7E-21 151.7 11.2 106 300-406 27-140 (142)
25 1wfm_A Synaptotagmin XIII; C2 99.7 2.4E-16 8.1E-21 149.6 12.7 104 300-407 24-133 (138)
26 3fbk_A RGS3, RGP3, regulator o 99.7 2E-16 6.8E-21 152.8 12.1 111 296-408 21-139 (153)
27 2dmg_A KIAA1228 protein; beta- 99.7 1.3E-16 4.5E-21 151.9 9.6 107 300-408 22-137 (142)
28 1ugk_A Synaptotagmin IV, KIAA1 99.7 5.6E-16 1.9E-20 146.8 13.2 107 300-407 20-134 (138)
29 2enp_A B/K protein; C2 type 1, 99.6 1.8E-16 6.2E-21 151.9 8.4 108 300-408 24-143 (147)
30 2cm5_A Rabphilin-3A; protein t 99.6 8.4E-16 2.9E-20 150.5 13.2 107 300-407 35-160 (166)
31 1tjx_A Similar to synaptotagmi 99.6 9.9E-16 3.4E-20 148.8 13.2 107 300-407 23-148 (159)
32 3n5a_A Synaptotagmin-7; calciu 99.6 7.1E-16 2.4E-20 145.6 11.6 93 299-392 13-112 (138)
33 2r83_A Synaptotagmin-1; C2A-C2 99.6 2.5E-15 8.4E-20 159.8 16.3 124 300-424 17-147 (284)
34 1w15_A Synaptotagmin IV; metal 99.6 2.7E-15 9.2E-20 144.7 13.2 103 300-405 28-137 (153)
35 3jzy_A Intersectin 2; C2 domai 99.6 3.8E-15 1.3E-19 171.5 14.4 119 300-423 385-507 (510)
36 3nsj_A Perforin-1; pore formin 99.6 1.4E-14 4.7E-19 166.4 15.0 112 301-425 393-505 (540)
37 1dqv_A Synaptotagmin III; beta 99.6 1.5E-14 5E-19 155.1 13.5 126 299-425 17-150 (296)
38 3l9b_A Otoferlin; C2-domain, b 99.5 1.3E-13 4.6E-18 128.9 11.5 118 303-426 22-142 (144)
39 2cjt_A UNC-13 homolog A, MUNC1 99.5 2.6E-13 8.7E-18 127.6 13.4 97 301-405 4-103 (131)
40 2cjs_A UNC-13 homolog A, MUNC1 99.5 1.7E-13 5.9E-18 134.2 12.2 120 300-427 12-144 (167)
41 2r83_A Synaptotagmin-1; C2A-C2 99.5 2.3E-13 7.8E-18 144.6 13.6 107 300-407 148-273 (284)
42 1djx_A PLC-D1, phosphoinositid 99.4 3.3E-13 1.1E-17 158.2 14.1 120 300-423 495-623 (624)
43 1cjy_A CPLA2, protein (cytosol 99.4 1.3E-13 4.4E-18 163.0 8.8 106 300-407 16-127 (749)
44 1dqv_A Synaptotagmin III; beta 99.3 2E-13 6.7E-18 146.3 2.2 107 300-407 150-276 (296)
45 3bxj_A RAS GTPase-activating p 99.3 2.4E-13 8.1E-18 155.3 -0.7 99 301-406 10-116 (483)
46 3pfq_A PKC-B, PKC-beta, protei 99.2 3.8E-11 1.3E-15 142.9 10.4 106 300-407 170-281 (674)
47 3qr0_A Phospholipase C-beta (P 99.0 1.2E-09 3.9E-14 130.7 11.5 112 301-424 649-771 (816)
48 3ohm_B 1-phosphatidylinositol- 99.0 8.8E-10 3E-14 132.4 9.6 112 301-424 724-845 (885)
49 2zkm_X 1-phosphatidylinositol- 98.9 1.5E-09 5.1E-14 130.3 10.8 111 300-422 676-797 (799)
50 1yrk_A NPKC-delta, protein kin 98.7 1.1E-07 3.8E-12 86.4 13.1 109 301-422 5-123 (126)
51 2enj_A NPKC-theta, protein kin 98.6 2.1E-07 7.2E-12 85.7 11.3 111 300-423 8-129 (138)
52 2pcs_A Conserved protein; stru 89.9 6.7 0.00023 36.4 14.6 122 623-761 8-131 (162)
53 2ns9_A Hypothetical protein AP 85.9 10 0.00035 34.7 12.9 136 622-780 17-154 (157)
54 2qim_A PR10.2B; trans-zeatin, 81.7 24 0.00083 32.9 13.6 143 623-784 9-155 (158)
55 1em2_A MLN64 protein; beta bar 80.9 5.1 0.00018 39.9 9.1 84 98-185 140-227 (229)
56 1em2_A MLN64 protein; beta bar 80.8 7.5 0.00026 38.7 10.3 147 623-778 71-225 (229)
57 3qsz_A STAR-related lipid tran 80.7 8.6 0.00029 36.9 10.4 144 19-181 29-177 (189)
58 1icx_A Protein LLR18A, LLPR10. 80.3 23 0.00077 33.0 12.9 143 623-784 8-153 (155)
59 2cay_A VPS36 PH domain, vacuol 80.3 5.1 0.00017 37.4 8.0 51 483-537 51-101 (145)
60 2hth_B Vacuolar protein sortin 78.4 14 0.00047 34.2 10.3 52 483-537 38-89 (140)
61 2pcs_A Conserved protein; stru 77.7 35 0.0012 31.3 13.4 140 19-183 5-148 (162)
62 1tw0_A Pathogenesis-related cl 77.5 27 0.00091 32.6 12.4 144 623-784 8-154 (157)
63 1ln1_A PC-TP, phosphatidylchol 76.0 16 0.00054 35.6 10.9 147 19-184 54-210 (214)
64 2wxf_A Phosphatidylinositol-4, 75.5 11 0.00038 45.7 11.2 72 300-374 215-295 (940)
65 1jss_A Stard4, cholesterol-reg 75.1 5.1 0.00018 39.9 7.0 147 20-181 70-221 (224)
66 3qsz_A STAR-related lipid tran 73.5 29 0.00098 33.0 11.8 141 624-777 33-178 (189)
67 2r55_A STAR-related lipid tran 73.2 13 0.00044 37.0 9.5 148 21-184 71-229 (231)
68 3l4c_A Dedicator of cytokinesi 72.3 41 0.0014 33.4 12.5 41 334-374 77-119 (220)
69 3kl1_A PYL2, putative uncharac 70.9 23 0.00078 34.5 10.3 152 12-185 30-181 (190)
70 3p0l_A Steroidogenic acute reg 70.0 3.7 0.00013 40.8 4.5 143 21-181 59-212 (221)
71 1jss_A Stard4, cholesterol-reg 69.8 27 0.00091 34.5 10.9 74 700-775 143-220 (224)
72 2r55_A STAR-related lipid tran 68.3 92 0.0031 30.5 14.6 147 624-778 73-228 (231)
73 2yrb_A Protein fantom; beta sa 68.1 20 0.00068 33.7 8.7 123 299-424 15-150 (156)
74 1e09_A PRU AV 1; allergen, maj 67.8 76 0.0026 29.4 13.1 143 623-784 8-155 (159)
75 1ln1_A PC-TP, phosphatidylchol 67.1 57 0.0019 31.5 12.6 142 624-777 58-208 (214)
76 2qim_A PR10.2B; trans-zeatin, 65.8 24 0.00083 32.9 9.1 118 18-155 5-123 (158)
77 1icx_A Protein LLR18A, LLPR10. 65.0 29 0.00099 32.3 9.4 144 19-185 5-149 (155)
78 3hhm_A Phosphatidylinositol-4, 64.0 28 0.00096 42.7 11.2 90 301-392 354-455 (1091)
79 1tw0_A Pathogenesis-related cl 63.3 28 0.00096 32.5 9.0 117 19-155 5-122 (157)
80 2l9p_A Uncharacterized protein 62.6 78 0.0027 29.1 12.1 142 621-777 11-154 (164)
81 2vq5_A S-norcoclaurine synthas 62.0 15 0.00052 36.1 7.0 118 15-155 27-149 (201)
82 3p0l_A Steroidogenic acute reg 60.6 30 0.001 34.0 9.2 144 624-776 61-212 (221)
83 2i9y_A Major latex protein-lik 60.0 20 0.0007 33.8 7.4 148 14-185 14-162 (166)
84 3uid_A Putative uncharacterize 59.0 1.2E+02 0.0039 28.3 13.6 143 620-781 15-160 (168)
85 2vjg_A Major allergen DAU C 1; 58.2 73 0.0025 29.6 10.8 118 17-155 4-123 (154)
86 2flh_A Cytokinin-specific bind 57.2 1E+02 0.0034 28.5 11.7 137 623-783 8-153 (155)
87 2lf2_A Uncharacterized protein 56.6 1.3E+02 0.0043 28.1 15.0 144 620-777 18-163 (175)
88 1e7u_A Phosphatidylinositol 3- 55.4 45 0.0015 40.5 10.9 72 302-374 218-297 (961)
89 1e09_A PRU AV 1; allergen, maj 54.3 62 0.0021 30.1 9.7 114 19-155 5-123 (159)
90 4a8u_A Major pollen allergen B 53.0 76 0.0026 29.6 10.1 115 21-155 7-123 (159)
91 3k3k_A Abscisic acid receptor 52.8 31 0.0011 34.1 7.5 150 12-186 45-196 (211)
92 4a8u_A Major pollen allergen B 50.8 1.6E+02 0.0053 27.4 13.1 143 624-784 9-155 (159)
93 1pfj_A TFIIH basal transcripti 50.2 54 0.0018 28.8 7.7 54 465-522 5-58 (108)
94 3f08_A Uncharacterized protein 48.6 1.3E+02 0.0046 27.2 10.9 100 624-746 8-108 (146)
95 3f08_A Uncharacterized protein 46.7 1E+02 0.0036 28.0 9.8 137 18-188 3-139 (146)
96 2wql_A Major allergen DAU C 1; 46.5 91 0.0031 29.0 9.4 113 22-155 9-123 (154)
97 1zyi_A Methylosome subunit pic 45.9 50 0.0017 31.5 7.4 57 475-537 34-92 (171)
98 3uid_A Putative uncharacterize 45.6 73 0.0025 29.7 8.8 144 18-182 14-160 (168)
99 2l9p_A Uncharacterized protein 45.4 43 0.0015 31.0 7.0 146 17-185 8-157 (164)
100 2ldk_A Uncharacterized protein 45.2 1.8E+02 0.0063 26.6 14.1 144 621-782 15-160 (172)
101 2y3a_A Phosphatidylinositol-4, 44.7 18 0.00062 44.5 5.1 70 301-373 352-430 (1092)
102 3jrs_A PYL1, putative uncharac 44.2 96 0.0033 30.5 9.5 120 12-153 49-168 (208)
103 2pso_A STAR-related lipid tran 44.0 2.5E+02 0.0085 27.7 13.0 110 72-192 118-232 (237)
104 3tvq_A Multifunctional cyclase 42.6 2.2E+02 0.0074 26.6 12.5 119 624-761 9-133 (169)
105 2flh_A Cytokinin-specific bind 41.8 1.1E+02 0.0038 28.2 9.2 140 17-185 3-150 (155)
106 2vq5_A S-norcoclaurine synthas 41.2 2.6E+02 0.0088 27.1 12.3 142 622-786 33-182 (201)
107 1xfs_A NC_840354, conserved hy 39.7 1.6E+02 0.0054 27.3 10.2 111 621-744 13-134 (178)
108 2d4r_A Hypothetical protein TT 39.5 1.8E+02 0.0062 24.9 13.7 138 623-782 7-144 (147)
109 3pu2_A Uncharacterized protein 38.3 80 0.0027 29.2 7.7 142 19-183 15-156 (164)
110 3jrs_A PYL1, putative uncharac 33.8 1.9E+02 0.0066 28.3 9.8 114 617-748 53-168 (208)
111 2pso_A STAR-related lipid tran 32.3 1.4E+02 0.0049 29.5 8.9 50 699-750 148-201 (237)
112 2ns9_A Hypothetical protein AP 31.4 38 0.0013 30.6 4.1 134 19-179 15-152 (157)
113 3rws_A MTN13 protein; zeatin, 31.3 3.2E+02 0.011 25.6 10.7 112 19-155 11-128 (168)
114 2i9y_A Major latex protein-lik 30.1 3.3E+02 0.011 25.2 10.5 141 623-783 22-165 (166)
115 2lf2_A Uncharacterized protein 29.7 1.3E+02 0.0045 27.9 7.8 145 17-183 16-164 (175)
116 2wql_A Major allergen DAU C 1; 29.2 3.4E+02 0.012 24.9 12.9 141 624-783 10-154 (154)
117 3kl1_A PYL2, putative uncharac 25.3 4.5E+02 0.015 25.1 13.5 118 617-745 34-151 (190)
118 2ldk_A Uncharacterized protein 24.3 1.9E+02 0.0066 26.5 7.8 143 17-181 12-158 (172)
119 3rws_A MTN13 protein; zeatin, 24.1 4.4E+02 0.015 24.6 13.0 140 623-784 14-161 (168)
120 3p9v_A Uncharacterized protein 23.5 3.5E+02 0.012 24.6 9.3 134 624-781 13-150 (161)
121 3k3k_A Abscisic acid receptor 22.7 3.1E+02 0.011 26.8 9.0 112 617-749 49-162 (211)
122 3qrz_A Abscisic acid receptor 22.6 11 0.00037 37.8 -1.7 147 12-184 73-219 (223)
123 1xuv_A Hypothetical protein MM 21.6 4.7E+02 0.016 24.0 13.2 141 621-777 25-166 (178)
124 1w7p_D VPS36P, YLR417W; ESCRT- 21.4 20 0.00068 40.8 0.0 52 484-537 44-95 (566)
No 1
>2dmh_A Myoferlin; beta-sandwich, FER-1-like protein 3, muscular dystrophy, cardiomyopathy, membrane fusion, dystrophin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.81 E-value=4e-19 Score=168.85 Aligned_cols=125 Identities=22% Similarity=0.310 Sum_probs=110.2
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeecccCCCCCeEeeEEEEEeecC---CCCeEEEEEEeeCCCC
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEE---PPSVLDVEVFDFDGPF 376 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~~tlnP~WnE~f~f~v~~~---~~~~L~v~V~D~d~~~ 376 (790)
..|.|.|+|++|+||+..+. |.+||||++++++++++|+++++++||.|||+|.|.+..+ ....|.|+|||+|. +
T Consensus 5 ~~g~L~v~v~~a~~L~~~~~-g~~dpyv~v~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~~l~i~V~d~d~-~ 82 (140)
T 2dmh_A 5 SSGMLRVIVESASNIPKTKF-GKPDPIVSVIFKDEKKKTKKVDNELNPVWNEILEFDLRGIPLDFSSSLGIIVKDFET-I 82 (140)
T ss_dssp BCCEEEEEEEEEESCCCCSS-SCCCEEEEEECSSCEEECCCCCSCSSCEEEEEEEEECSSCCCCTTCEEEEEEEETTC-S
T ss_pred CCcEEEEEEEEeeCCCCCCC-CCCCeEEEEEECCEeEEeeeecCCCCCccCcEEEEEecccccCCCCEEEEEEEECCC-C
Confidence 45799999999999999998 9999999999999999999999999999999999998543 46899999999998 8
Q ss_pred CCCCccccEEEeceecCCCCceeEEEE---ccccccCcCCceeEEEEEEecCC
Q 003874 377 DQATSLGHAEINFLKHTSTELADMWVS---LEGKLAQSAQSKVHLRIFLENNN 426 (790)
Q Consensus 377 ~~dd~LG~~~i~L~~l~~~~~~~~w~~---L~~k~~~~~~G~l~L~i~l~~~~ 426 (790)
++|++||++.+++..+..+...+.|++ |.+..+....|+|+|++.+.+..
T Consensus 83 ~~~~~lG~~~i~l~~l~~~~~~~~w~~l~~l~~~~~~~~~G~l~l~~~~~p~~ 135 (140)
T 2dmh_A 83 GQNKLIGTATVALKDLTGDQSRSLPYKLISLLNEKGQDTGATIDLVIGYDPPS 135 (140)
T ss_dssp SSCCCCEEEEEEGGGTCSSSCEEEEEEEEEEECTTCCEEEEEEEEEEEECCCB
T ss_pred CCCceEEEEEEEHHHhccCCCceeEEeeeeccCCCCCCCCCEEEEEEEEECCC
Confidence 899999999999999988888899988 66554445579999999776543
No 2
>3kwu_A MUNC13-1; calcium binding protein, phospholipid binding protein, metal binding protein; HET: GOL; 1.37A {Rattus norvegicus} SCOP: b.7.1.0 PDB: 3kwt_A*
Probab=99.80 E-value=8.9e-19 Score=168.16 Aligned_cols=121 Identities=21% Similarity=0.380 Sum_probs=106.5
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeecccCCCCCeEeeEEEEEeecCCCCeEEEEEEeeCCCC--
Q 003874 299 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPF-- 376 (790)
Q Consensus 299 ~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d~~~-- 376 (790)
.+.+.|+|+|++|++|+++|..|.+||||++.+++++++|+++++++||.|||+|.|.+. .+...|.|+|||+|. +
T Consensus 14 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~Wne~f~f~v~-~~~~~l~~~v~d~d~-~~~ 91 (148)
T 3kwu_A 14 KWSAKISITVVCAQGLQAKDKTGSSDPYVTVQVGKTKKRTKTIYGNLNPVWEENFHFECH-NSSDRIKVRVLDEDD-DIK 91 (148)
T ss_dssp -CCEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCCSCSSCEEEEEEEEEEC-STTCEEEEEEEECCC-SHH
T ss_pred ccccEEEEEEEeeeCCCCCCCCCCcCeEEEEEECCEEEECCccCCCCCCCcccEEEEEec-CCCCEEEEEEEECCC-Ccc
Confidence 467999999999999999999999999999999999999999999999999999999984 456899999999997 5
Q ss_pred ---------CCCCccccEEEeceecCCCCceeEEEEccccccC-cCCceeEEEEEEe
Q 003874 377 ---------DQATSLGHAEINFLKHTSTELADMWVSLEGKLAQ-SAQSKVHLRIFLE 423 (790)
Q Consensus 377 ---------~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~~~-~~~G~l~L~i~l~ 423 (790)
++|++||++.+++..+ ....+.|++|..+... ...|+|+|++.++
T Consensus 92 ~~~~~~~~~~~~~~lG~~~i~l~~l--~~~~~~w~~L~~~~~~~~~~G~i~l~l~~e 146 (148)
T 3kwu_A 92 SRVKQRFKRESDDFLGQTIIEVRTL--SGEMDVWYNLDKRTDKSAVSGAIRLHISVE 146 (148)
T ss_dssp HHHHTTTSSCSSEEEEEEEEEGGGC--CSEEEEEEECBCSSTTCCCCCEEEEEEEEE
T ss_pred ccccccccCCCCccEEEEEEEHHHC--cCCCCEEEEcccCCCCCCCceEEEEEEEEE
Confidence 7899999999999998 4566899999865432 3579999999764
No 3
>2fk9_A Protein kinase C, ETA type; ATP-binding, metal-binding, nucleotide-binding, diacylglycerol binding, serine/threonine-protein kinase, transferase; 1.75A {Homo sapiens}
Probab=99.80 E-value=1.8e-19 Score=174.78 Aligned_cols=117 Identities=21% Similarity=0.308 Sum_probs=102.8
Q ss_pred cCCceEEEEEEEEeecCCCCCC----------CCCCCcEEEEEECCeE-eeeecccCCCCCeEeeEEEEEeecCCCCeEE
Q 003874 298 QGDGWVLTVALVEGVNLASSEM----------TGLSDPYVVFTCNGKT-RTSSVQLQTCDPQWHDILEFDAMEEPPSVLD 366 (790)
Q Consensus 298 ~~~~g~L~V~vl~A~~L~~~d~----------~g~sDPyV~v~l~~~~-~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~ 366 (790)
....|.|+|+|++|+||+++|. .|.+||||++.+++++ .+|+++++|+||.|||+|.|.+.. ...|.
T Consensus 25 ~~~~g~L~V~VieA~~L~~~D~~~~~~~f~~~~g~sDPYv~v~l~~~~~~kT~v~~ktlnP~WNE~F~f~v~~--~~~L~ 102 (157)
T 2fk9_A 25 MKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPYLTVSVDQVRVGQTSTKQKTNKPTYNEEFCANVTD--GGHLE 102 (157)
T ss_dssp CCEEEEEEEEEEEEECCCCCHHHHHTTTSSSSCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEE--ECEEE
T ss_pred ccCccEEEEEEEEEECCCCccccccccccccCCCCCCeEEEEEECCEeeEEeeecCCCCCCccCcEEEEEcCC--CCEEE
Confidence 3567999999999999999883 3679999999998765 699999999999999999999853 46899
Q ss_pred EEEEeeCCCCCCCCccccEEEeceecCCC----CceeEEEEccccccCcCCceeEEEEEEe
Q 003874 367 VEVFDFDGPFDQATSLGHAEINFLKHTST----ELADMWVSLEGKLAQSAQSKVHLRIFLE 423 (790)
Q Consensus 367 v~V~D~d~~~~~dd~LG~~~i~L~~l~~~----~~~~~w~~L~~k~~~~~~G~l~L~i~l~ 423 (790)
|+|||+|. +++|++||++.|+|.++..+ ...+.|++|++ +|+|+|++.++
T Consensus 103 ~~V~D~d~-~~~dd~iG~~~i~l~~l~~~~~~~~~~~~W~~L~~------~G~i~l~l~~~ 156 (157)
T 2fk9_A 103 LAVFHETP-LGYDHFVANCTLQFQELLRTTGASDTFEGWVDLEP------EGKVFVVITLT 156 (157)
T ss_dssp EEEEECCS-SSSCEEEEEEEEEHHHHHHHHTTCSEEEEEEECBS------SCEEEEEEEEC
T ss_pred EEEEECCC-CCCCCEEEEEEEEHHHhhcccCCCCcccEEEECCC------CcEEEEEEEEE
Confidence 99999998 89999999999999998643 67899999975 79999999874
No 4
>2ep6_A MCTP2 protein; beta sandwich, Ca2+ binding, membrane binding, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=99.79 E-value=9.1e-19 Score=165.05 Aligned_cols=121 Identities=23% Similarity=0.386 Sum_probs=107.0
Q ss_pred cCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeecccCCCCCeEeeEEEEEeecCCCCeEEEEEEeeCCCCC
Q 003874 298 QGDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFD 377 (790)
Q Consensus 298 ~~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d~~~~ 377 (790)
....+.|+|+|++|++|++++..|.+||||++++++++++|+++++++||.|||+|.|.+. +....|.|+|||+|. ++
T Consensus 9 ~~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~t~nP~wne~f~f~~~-~~~~~l~i~V~d~d~-~~ 86 (133)
T 2ep6_A 9 VKDVGILQVKVLKAADLLAADFSGKSDPFCLLELGNDRLQTHTVYKNLNPEWNKVFTFPIK-DIHDVLEVTVFDEDG-DK 86 (133)
T ss_dssp CCCSEEEEEEEEEEESCCCSSSSSCCCEEEEEEETTEEEECCCCSSCSSCCCCEEEEEEES-CTTCEEEEEEEEEET-TE
T ss_pred cCCceEEEEEEEeeECCCCCCCCCCcCeEEEEEECCEEEEeeeecCCCCCccccEEEEEec-CCCCEEEEEEEECCC-CC
Confidence 3467899999999999999999999999999999999999999999999999999999984 556889999999998 78
Q ss_pred CCCccccEEEeceecCCCCceeEEEEcccccc-CcCCceeEEEEEE
Q 003874 378 QATSLGHAEINFLKHTSTELADMWVSLEGKLA-QSAQSKVHLRIFL 422 (790)
Q Consensus 378 ~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~~-~~~~G~l~L~i~l 422 (790)
+|++||++.+++..+..+. ..|++|..+.. ....|+|+|++.+
T Consensus 87 ~~~~lG~~~i~l~~l~~~~--~~w~~L~~~~~~~~~~G~i~l~i~~ 130 (133)
T 2ep6_A 87 PPDFLGKVAIPLLSIRDGQ--PNCYVLKNKDLEQAFKGVIYLEMDL 130 (133)
T ss_dssp EEEECCBCEEEGGGCCSSC--CEECCCBCSCTTSCCSSEEEEEEEE
T ss_pred CCCeeEEEEEEHHHccCCC--ceEEEeecCCCCCccceEEEEEEEE
Confidence 8999999999999986543 58999986543 3467999999854
No 5
>1wfj_A Putative elicitor-responsive gene; C2 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, plant protein; NMR {Arabidopsis thaliana} SCOP: b.7.1.2
Probab=99.78 E-value=9e-19 Score=165.58 Aligned_cols=124 Identities=20% Similarity=0.341 Sum_probs=108.6
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeeccc-CCCCCeEeeEEEEEeecCCCCeEEEEEEeeCCCCC
Q 003874 299 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQL-QTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFD 377 (790)
Q Consensus 299 ~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~-~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d~~~~ 377 (790)
...+.|+|+|++|++|++.+..|.+||||++++++++++|++++ +++||.|||+|.|.+.. ....|.|+|||+|. ++
T Consensus 7 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~kT~~~~~~~~nP~Wne~f~f~v~~-~~~~l~~~V~d~~~-~~ 84 (136)
T 1wfj_A 7 GPHGTLEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSE-GTTELKAKIFDKDV-GT 84 (136)
T ss_dssp CCEEEEEEEEEEEEECSSCCSSCSSCCCEEEESSSCEEECCCCTTCCSSCEEEEEEEEEEES-SCCEEEEEECCSSS-CT
T ss_pred CCcEEEEEEEEeccCCCCcccCCCcCceEEEEECCccceeEeccCCCCCCccCcEEEEEECC-CCCEEEEEEEECCC-CC
Confidence 35789999999999999999999999999999999899999998 89999999999999854 67899999999998 88
Q ss_pred CCCccccEEEeceec-CCCCceeEEEEccccccCcCCceeEEEEEEecCC
Q 003874 378 QATSLGHAEINFLKH-TSTELADMWVSLEGKLAQSAQSKVHLRIFLENNN 426 (790)
Q Consensus 378 ~dd~LG~~~i~L~~l-~~~~~~~~w~~L~~k~~~~~~G~l~L~i~l~~~~ 426 (790)
+|++||++.++|..+ ..+...+.|++|.. .....|+|+|.+.+.+..
T Consensus 85 ~d~~lG~~~i~l~~l~~~~~~~~~w~~L~~--~~~~~G~i~l~l~~~p~~ 132 (136)
T 1wfj_A 85 EDDAVGEATIPLEPVFVEGSIPPTAYNVVK--DEEYKGEIWVALSFKPSG 132 (136)
T ss_dssp TTCCSEEEEEESHHHHHHSEEEEEEEEEEE--TTEEEEEEEEEEEEEECC
T ss_pred CCceEEEEEEEHHHhccCCCCCcEEEEeec--CCccCEEEEEEEEEEeCC
Confidence 999999999999998 44556788999972 234579999999776543
No 6
>1gmi_A Protein kinase C, epsilon type; PKC, C2 domain, X-RAY, phospholipids, PKC epsilon.; 1.7A {Rattus rattus} SCOP: b.7.1.1
Probab=99.78 E-value=8.9e-19 Score=165.91 Aligned_cols=117 Identities=21% Similarity=0.346 Sum_probs=101.4
Q ss_pred CceEEEEEEEEeecCCCCCCCCC-----------CCcEEEEEECCeE-eeeecccCCCCCeEeeEEEEEeecCCCCeEEE
Q 003874 300 DGWVLTVALVEGVNLASSEMTGL-----------SDPYVVFTCNGKT-RTSSVQLQTCDPQWHDILEFDAMEEPPSVLDV 367 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~-----------sDPyV~v~l~~~~-~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v 367 (790)
..|.|+|+|++|+||+++|..+. +||||++.+++.. .+|+++++++||.|||+|.|.+... ..|.|
T Consensus 4 ~~g~L~v~v~~a~~L~~~d~~~~~~~g~~~~~~~~DPyv~v~l~~~~~~~T~~~~~t~nP~WnE~f~f~v~~~--~~L~~ 81 (136)
T 1gmi_A 4 FNGLLKIKICEAVSLKPTAWSLRDAVGPRPQTFLLDPYIALNVDDSRIGQTATKQKTNSPAWHDEFVTDVCNG--RKIEL 81 (136)
T ss_dssp EEEEEEEEEEEEESCCCCHHHHCC-CCSSCCCCCCCEEEEEEETTEEEEECCCCSSCSSCEEEEEEEEEEEEE--CEEEE
T ss_pred cceEEEEEEEeCcCCCCcccccccccccccCCcCcCcEEEEEECCeEeeeeeEECCCcCCccCCEEEEEecCC--CEEEE
Confidence 46899999999999999885443 9999999998765 5999999999999999999998543 89999
Q ss_pred EEEeeCCCCCCCCccccEEEeceecCCC--CceeEEEEccccccCcCCceeEEEEEEecC
Q 003874 368 EVFDFDGPFDQATSLGHAEINFLKHTST--ELADMWVSLEGKLAQSAQSKVHLRIFLENN 425 (790)
Q Consensus 368 ~V~D~d~~~~~dd~LG~~~i~L~~l~~~--~~~~~w~~L~~k~~~~~~G~l~L~i~l~~~ 425 (790)
+|||+|. +++|++||++.+++..+..+ ...+.|++|++ .|+|+|++.+.++
T Consensus 82 ~V~d~d~-~~~dd~iG~~~i~l~~l~~~~~~~~~~w~~L~~------~G~i~l~l~~~~~ 134 (136)
T 1gmi_A 82 AVFHDAP-IGYDDFVANCTIQFEELLQNGSRHFEDWIDLEP------EGKVYVIIDLSGS 134 (136)
T ss_dssp EEEECCS-SSSCEEEEEEEEEHHHHTSTTCSEEEEEEECBS------SCEEEEEEEEEEE
T ss_pred EEEeCCC-CCCCCEEEEEEEEHHHhcccCCCCccEEEEcCC------CeEEEEEEEEEec
Confidence 9999998 89999999999999998654 34589999975 6999999988654
No 7
>1rlw_A Phospholipase A2, CALB domain; hydrolase, C2 domain; 2.40A {Homo sapiens} SCOP: b.7.1.1
Probab=99.77 E-value=1.6e-18 Score=161.55 Aligned_cols=117 Identities=18% Similarity=0.294 Sum_probs=100.3
Q ss_pred ceEEEEEEEEeecCCCC---CCCCCCCcEEEEEECC---eEeeeecccCCCCCeEeeEEEEEeecCCCCeEEEEEEeeCC
Q 003874 301 GWVLTVALVEGVNLASS---EMTGLSDPYVVFTCNG---KTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDG 374 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~---d~~g~sDPyV~v~l~~---~~~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d~ 374 (790)
.+.|+|+|++|+||+++ +..|.+||||++++++ .+++|+++++++||.|||+|.|.+..+....|.|+|||+|.
T Consensus 2 ~~~L~v~v~~a~~L~~~~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~l~i~V~d~d~ 81 (126)
T 1rlw_A 2 SHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDANY 81 (126)
T ss_dssp CEEEEEEEEEEESCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCEEEEEEEECCS
T ss_pred CcEEEEEEEeeeCCCCCCccccCCCCCCEEEEEEccCCCceEEccccCCCCCCcccceEEEEecCCCCCEEEEEEEECCC
Confidence 47899999999999984 5678999999999974 78899999999999999999999866667899999999998
Q ss_pred CCCCCCccccEEEeceecCCCCceeEEEEccccccCcCCceeEEEEEEecC
Q 003874 375 PFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQSKVHLRIFLENN 425 (790)
Q Consensus 375 ~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~~~~~~G~l~L~i~l~~~ 425 (790)
+ +|++||++.++|..+..+...+.|++|.+ .|++.+.+.+..+
T Consensus 82 -~-~~~~iG~~~i~l~~l~~~~~~~~~~~L~~------~~~g~i~~~le~~ 124 (126)
T 1rlw_A 82 -V-MDETLGTATFTVSSMKVGEKKEVPFIFNQ------VTEMVLEMSLEVA 124 (126)
T ss_dssp -S-CCEEEEEEEEEGGGSCTTCEEEEEEEETT------TEEEEEEEEEECC
T ss_pred -C-CCceeEEEEEEHHHccCCCcEEEEEEcCC------CceEEEEEEEEeC
Confidence 6 48999999999999998889999999986 3444444444433
No 8
>3b7y_A E3 ubiquitin-protein ligase NEDD4; C2 domain, UBL-conjugation pathway, structural genomics consortium, SGC, cytoplasm; 1.80A {Homo sapiens} PDB: 2nsq_A
Probab=99.76 E-value=6.4e-18 Score=163.11 Aligned_cols=122 Identities=19% Similarity=0.336 Sum_probs=98.4
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeeeecccCCCCCeEeeEEEEEeecCCCCeEEEEEEee
Q 003874 299 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG------KTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDF 372 (790)
Q Consensus 299 ~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~------~~~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~ 372 (790)
...+.|+|+|++|+||++++..|.+||||++++.. .+++|+++++++||.|||+|.|.+. .....|.|+|||+
T Consensus 17 ~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~-~~~~~l~~~V~d~ 95 (153)
T 3b7y_A 17 ENSRIVRVRVIAGIGLAKKDILGASDPYVRVTLYDPMNGVLTSVQTKTIKKSLNPKWNEEILFRVH-PQQHRLLFEVFDE 95 (153)
T ss_dssp TTCEEEEEEEEEEESCC-------CCEEEEEEEEETTTEEEEEEECCCCSSCSSCCCCEEEEEEEC-TTTCEEEEEEEEC
T ss_pred CCccEEEEEEEEeeCCCCCCCCCCCCcEEEEEEECCCCccceeeeCccccCCCCCCCCCEEEEEec-CCCCEEEEEEEEC
Confidence 35689999999999999999899999999999963 5789999999999999999999984 4567899999999
Q ss_pred CCCCCCCCccccEEEeceecCCCCce------eEEEEccccc-cCcCCceeEEEEEE
Q 003874 373 DGPFDQATSLGHAEINFLKHTSTELA------DMWVSLEGKL-AQSAQSKVHLRIFL 422 (790)
Q Consensus 373 d~~~~~dd~LG~~~i~L~~l~~~~~~------~~w~~L~~k~-~~~~~G~l~L~i~l 422 (790)
|. +++|++||++.++|..+..+... ..|++|..+. .....|+|+|++.+
T Consensus 96 d~-~~~d~~iG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~l~l~~ 151 (153)
T 3b7y_A 96 NR-LTRDDFLGQVDVPLYPLPTENPRLERPYTFKDFVLHPRSHKSRVKGYLRLKMTY 151 (153)
T ss_dssp CS-SSCCEEEEEEEEECCSCCBCCTTSCCCCCCEEEECBCSSTTCCCCSEEEEEEEE
T ss_pred CC-CcCCCeeEEEEEEHHHcccCCCcccccccccccccccccCCCCcceEEEEEEEE
Confidence 98 88999999999999998655432 5999997653 23457999999865
No 9
>3m7f_B E3 ubiquitin-protein ligase NEDD4; C2 domain, GRB10, SH2 domain, phosphoprotein, conjugation pathway, signaling protein-ligase complex; 2.00A {Mus musculus}
Probab=99.76 E-value=9.4e-18 Score=166.06 Aligned_cols=125 Identities=19% Similarity=0.354 Sum_probs=99.1
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeeeecccCCCCCeEeeEEEEEeecCCCCeEEEEEEee
Q 003874 299 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG------KTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDF 372 (790)
Q Consensus 299 ~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~------~~~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~ 372 (790)
...|.|+|+|++|++|+.++..|.+||||+++++. .+++|+++++++||.|||+|.|.+. .....|.|+|||+
T Consensus 5 ~~~g~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~~kT~v~~~t~nP~Wne~f~f~v~-~~~~~L~~~V~d~ 83 (176)
T 3m7f_B 5 DDTRVVRVKVIAGIGLAKKDILGASDPYVRVTLYDPMSGILTSVQTKTIKKSLNPKWNEEILFRVL-PQRHRILFEVFDE 83 (176)
T ss_dssp TTCEEEEEEEEEEESCC---CCCCCCEEEEEEEEETTTEEEEEEECCCCSSCSSCEEEEEEEEEEC-TTTCEEEEEEEEC
T ss_pred CCcEEEEEEEEEeeCCCCcCCCCCcCcEEEEEEECCCCCcccceeCceECCCCCCcccceEEEEEc-CCCCEEEEEEEEC
Confidence 45789999999999999999999999999999964 6789999999999999999999984 4567899999999
Q ss_pred CCCCCCCCccccEEEeceecCCCCce-e-----EEEEccccccC-cCCceeEEEEEEecC
Q 003874 373 DGPFDQATSLGHAEINFLKHTSTELA-D-----MWVSLEGKLAQ-SAQSKVHLRIFLENN 425 (790)
Q Consensus 373 d~~~~~dd~LG~~~i~L~~l~~~~~~-~-----~w~~L~~k~~~-~~~G~l~L~i~l~~~ 425 (790)
|. +++|++||++.|+|..+..+... + .||+|..+... ...|.|+|++.+.+.
T Consensus 84 d~-~~~d~~lG~~~i~l~~l~~~~~~~~~~~~~~w~~L~~~~~~~~~~G~l~l~l~~~p~ 142 (176)
T 3m7f_B 84 NR-LTRDDFLGQVDVPLYPLPTENPRMERPYTFKDFVLHPRSHKSRVKGYLRLKMTYLPK 142 (176)
T ss_dssp C-----CEEEEEEEEESCSCCBC------CCCCEEEECBCSSTTCCCCSEEEEEEEECC-
T ss_pred CC-CCCCcEEEEEEEEHHHccccCCcccccccccEEEccccCCCCccCEEEEEEEEEEeC
Confidence 98 88999999999999998665443 2 79999875432 347999999977655
No 10
>2b3r_A Phosphatidylinositol-4-phosphate 3-kinase C2 DOMA containing alpha polypeptide; C2 domain, lipid binding, PI3-kinase, transferase; 2.30A {Mus musculus}
Probab=99.74 E-value=1e-17 Score=158.26 Aligned_cols=109 Identities=16% Similarity=0.249 Sum_probs=95.9
Q ss_pred ccCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeeeecccCCCCCeEeeEEEEE-eecC--CCCeEEEE
Q 003874 297 AQGDGWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFD-AMEE--PPSVLDVE 368 (790)
Q Consensus 297 ~~~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l-----~~~~~kT~v~~~tlnP~WnE~f~f~-v~~~--~~~~L~v~ 368 (790)
+....+.|.|+|++|+||+. +..|.+||||++++ +..+++|+++++++||.|||+|.|. +..+ ....|.|+
T Consensus 15 ~~~~~~~L~V~V~~a~~L~~-~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wnE~f~f~~v~~~~l~~~~L~~~ 93 (134)
T 2b3r_A 15 VSYRNGTLFIMVMHIKDLVT-EDGADPNPYVKTYLLPDTHKTSKRKTKISRKTRNPTFNEMLVYSGYSKETLRQRELQLS 93 (134)
T ss_dssp EEEETTEEEEEEEEEECCCC-TTSCCCCEEEEEEEESCSSSCCCEECCCCCSCSSCEEEEEEEEESCCHHHHTTCEEEEE
T ss_pred EeecCCEEEEEEEEeeCCCC-CCCCCCCeEEEEEEEcCCCCCceecCCcCcCCCCCCCccEEEECCcCHHHhCcCEEEEE
Confidence 33456899999999999997 77899999999998 3567899999999999999999999 6433 45799999
Q ss_pred EEeeCCCCCCCCccccEEEeceecCCCCceeEEEEcccc
Q 003874 369 VFDFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGK 407 (790)
Q Consensus 369 V~D~d~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k 407 (790)
|||+|. ++++++||++.++|..+..+...+.||+|.++
T Consensus 94 V~d~d~-~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 131 (134)
T 2b3r_A 94 VLSAES-LRENFFLGGITLPLKDFNLSKETVKWYQLTAA 131 (134)
T ss_dssp EEECCS-SSCCEEEEEEEEEGGGSCTTSCEEEEEECBC-
T ss_pred EEECCC-CCCCcEEEEEEEEhhhccCCCCcceeEECCCc
Confidence 999998 88999999999999999888888999999874
No 11
>3pyc_A E3 ubiquitin-protein ligase smurf1; phospholipid binding, membrane associate, lipid binding PROT; 1.96A {Homo sapiens} PDB: 2jqz_A
Probab=99.73 E-value=2.9e-17 Score=154.52 Aligned_cols=119 Identities=13% Similarity=0.235 Sum_probs=99.4
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC--eEeeeecccCCCCCeEeeEEEEEeecCCCCeEEEEEEeeCCCCCC
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG--KTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFDQ 378 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~--~~~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d~~~~~ 378 (790)
...|+|+|++|++|+++|..|.+||||++.++. ++++|+++++++||.|||+|.|.+... ..|.|+|||+|. +++
T Consensus 4 ~~~L~V~v~~a~~L~~~d~~g~sDpyv~v~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~--~~l~~~v~d~d~-~~~ 80 (132)
T 3pyc_A 4 FIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT--DSITISVWNHKK-IHK 80 (132)
T ss_dssp EEEEEEEEEEEESCCCCSTTCCCCEEEEEEETTTCCEEECCCCSSCSSCEEEEEEEEEEETT--CCEEEEEEEGGG-TTS
T ss_pred eEEEEEEEEEeECCCCCCCCCCcCeEEEEEECCCCceEECCccCCCCCCCccCEEEEEeCCC--CEEEEEEEECCC-CCC
Confidence 457999999999999999999999999999964 789999999999999999999998443 459999999998 766
Q ss_pred ---CCccccEEEeceec-CCCCceeEEEEcccccc---CcCCceeEEEEEE
Q 003874 379 ---ATSLGHAEINFLKH-TSTELADMWVSLEGKLA---QSAQSKVHLRIFL 422 (790)
Q Consensus 379 ---dd~LG~~~i~L~~l-~~~~~~~~w~~L~~k~~---~~~~G~l~L~i~l 422 (790)
|++||++.+++..+ ........|++|..+.+ ....|+|++.+..
T Consensus 81 ~~~d~~lG~~~i~l~~l~~~~~~~~~~~~L~~~~~~~~~~~~G~i~v~l~~ 131 (132)
T 3pyc_A 81 KQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQT 131 (132)
T ss_dssp STTTTEEEEEEECHHHHHHHTTSCCEEEECBCSSTTCCCCCCSEEEEEEEE
T ss_pred CCCCCceEEEEEeHHHhhcccccCcEEEeeeecCCCCCCceeEEEEEEEEc
Confidence 89999999999887 33444568999976532 2347899988753
No 12
>1rsy_A Synaptotagmin I; calcium/phospholipid binding protein; 1.90A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.71 E-value=4.1e-17 Score=157.42 Aligned_cols=108 Identities=22% Similarity=0.381 Sum_probs=97.0
Q ss_pred cCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeeeecccCCCCCeEeeEEEEEeecC--CCCeEEEEEEee
Q 003874 298 QGDGWVLTVALVEGVNLASSEMTGLSDPYVVFTC---NGKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDF 372 (790)
Q Consensus 298 ~~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l---~~~~~kT~v~~~tlnP~WnE~f~f~v~~~--~~~~L~v~V~D~ 372 (790)
....+.|+|+|++|+||+..+..|.+||||++++ +.++++|+++++++||.|||+|.|.+..+ ....|.|+|||+
T Consensus 38 ~~~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 117 (152)
T 1rsy_A 38 DFQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDF 117 (152)
T ss_dssp ETTTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETTCCSCEECCCCTTCSSCEEEEEEEECCCHHHHTTCEEEEEEEEC
T ss_pred eCCCCEEEEEEEEeECCCCccCCCCcCeEEEEEEEcCCCceEeccccCCCCCCcCcccEEEeecHHHcCCCEEEEEEEEC
Confidence 3456799999999999999999999999999999 35678999999999999999999987543 357899999999
Q ss_pred CCCCCCCCccccEEEeceecCCCCceeEEEEccc
Q 003874 373 DGPFDQATSLGHAEINFLKHTSTELADMWVSLEG 406 (790)
Q Consensus 373 d~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~ 406 (790)
|. ++++++||++.++|..+..+...+.|++|.+
T Consensus 118 d~-~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 150 (152)
T 1rsy_A 118 DR-FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 150 (152)
T ss_dssp CS-SSCCEEEEEEEEEGGGCCCSSCEEEEEECBC
T ss_pred CC-CCCCcEEEEEEEEchhccCCCCcceEEECCC
Confidence 98 8899999999999999988888899999975
No 13
>3f04_A Synaptotagmin-1; C2A, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal- binding, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.7.1.2 PDB: 3f01_A 3f05_A 3f00_A 1byn_A 2k45_A 2k4a_A 2k8m_A 2ki6_A*
Probab=99.71 E-value=3.1e-17 Score=156.44 Aligned_cols=107 Identities=22% Similarity=0.382 Sum_probs=96.7
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeeeecccCCCCCeEeeEEEEEeecC--CCCeEEEEEEeeC
Q 003874 299 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTC---NGKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDFD 373 (790)
Q Consensus 299 ~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l---~~~~~kT~v~~~tlnP~WnE~f~f~v~~~--~~~~L~v~V~D~d 373 (790)
...+.|.|+|++|++|+.++..|.+||||++++ +.++++|+++++++||.|||+|.|.+..+ ....|.|+|||+|
T Consensus 31 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~d 110 (143)
T 3f04_A 31 FQNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELGGKTLVMAVYDFD 110 (143)
T ss_dssp TTTTEEEEEEEEEECCCCBGGGBCCCEEEEEEEESCCSCCEECCCCCSCSSCEEEEEEEECCCHHHHTTCEEEEEEEECC
T ss_pred CCCCEEEEEEEEecCCCCCCCCCCcCcEEEEEEECCCCccEECccCcCCCCCcCcCeEEEeecHhhcCCCEEEEEEEeCC
Confidence 356799999999999999998999999999999 45688999999999999999999987543 3479999999999
Q ss_pred CCCCCCCccccEEEeceecCCCCceeEEEEccc
Q 003874 374 GPFDQATSLGHAEINFLKHTSTELADMWVSLEG 406 (790)
Q Consensus 374 ~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~ 406 (790)
. +++|++||++.++|..+..+...+.|++|++
T Consensus 111 ~-~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~ 142 (143)
T 3f04_A 111 R-FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQS 142 (143)
T ss_dssp S-SSCCEEEEEEEEEGGGCCTTSCEEEEEECBC
T ss_pred C-CCCCceEEEEEEEHHHccCCCCcceEEECcC
Confidence 9 8999999999999999988888999999975
No 14
>3fdw_A Synaptotagmin-like protein 4; structural genomics, phospholipid binding, alternative splicing, cell membrane, cytoplasmic vesicle, membrane; 2.20A {Homo sapiens}
Probab=99.70 E-value=1.4e-17 Score=159.92 Aligned_cols=110 Identities=25% Similarity=0.345 Sum_probs=95.4
Q ss_pred CCceEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC-----CeEeeeecccCCCCCeEeeEEEEEeecCC--CCeEEEEEE
Q 003874 299 GDGWVLTVALVEGVNLASSE-MTGLSDPYVVFTCN-----GKTRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVF 370 (790)
Q Consensus 299 ~~~g~L~V~vl~A~~L~~~d-~~g~sDPyV~v~l~-----~~~~kT~v~~~tlnP~WnE~f~f~v~~~~--~~~L~v~V~ 370 (790)
...+.|.|+|++|+||++++ ..|.+||||++.+. ..+++|+++++++||.|||+|.|.+..+. ...|.|+||
T Consensus 20 ~~~~~L~V~v~~a~~L~~~d~~~~~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~~L~~~V~ 99 (148)
T 3fdw_A 20 QQTQSLVVHVKECHQLAYADEAKKRSNPYVKTYLLPDKSRQGKRKTSIKRDTVNPLYDETLRYEIPESLLAQRTLQFSVW 99 (148)
T ss_dssp TTTTEEEEEEEEEESCCCSBTTTTBCCEEEEEEEETCCSGGGEEECCCCSSCSSCEEEEEEEEECCSTTGGGCEEEEEEE
T ss_pred CCCCEEEEEEEEecCCCCcccCCCCCCeEEEEEEEcCCcccCccccccCCCCCCCcEeeEEEEEeChhHhCceEEEEEEE
Confidence 34679999999999999988 58899999999995 34789999999999999999999975442 457999999
Q ss_pred eeCCCCCCCCccccEEEeceecCCCCceeEEEEcccccc
Q 003874 371 DFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLA 409 (790)
Q Consensus 371 D~d~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~~ 409 (790)
|+|. ++++++||++.++|..+..+...+.|++|.++..
T Consensus 100 d~d~-~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~~ 137 (148)
T 3fdw_A 100 HHGR-FGRNTFLGEAEIQMDSWKLDKKLDHCLPLHGKIS 137 (148)
T ss_dssp EECG-GGCEEEEEEEEEEHHHHHHHCCSEEEEECBCC--
T ss_pred ECCC-CcCCcEEEEEEEEcccccccCCccceEECcCccc
Confidence 9998 8899999999999999977777889999998653
No 15
>2z0u_A WW domain-containing protein 1; C2 domain, alternative splicing, coiled coil, cytoplasm, phosphorylation, polymorphism, lipid binding protein; 2.20A {Homo sapiens}
Probab=99.70 E-value=1.5e-17 Score=161.21 Aligned_cols=107 Identities=13% Similarity=0.078 Sum_probs=94.0
Q ss_pred cCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeeeecccCCCCCeEeeEEEEEeecC--CCCeEEEEE
Q 003874 298 QGDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG------KTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEV 369 (790)
Q Consensus 298 ~~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~------~~~kT~v~~~tlnP~WnE~f~f~v~~~--~~~~L~v~V 369 (790)
....+.|+|.|++|+||+++|..|.+||||++++.. .++||+++++|+||+|||+|.|.+..+ ....|.|+|
T Consensus 39 ~~~~~~L~V~Vi~a~~L~~~d~~g~sDPyVkv~l~~~~~~~~~~~kT~v~~~tlnP~wnE~F~f~v~~~~l~~~~L~~~V 118 (155)
T 2z0u_A 39 DEKNKQFAILIIQLSNLSALLQQQDQKVNIRVAVLPCSESTTCLFRTRPLDASDTLVFNEVFWVSMSYPALHQKTLRVDV 118 (155)
T ss_dssp ETTTTEEEEEEEEEECGGGTCCSCCSEEEEEEEEESCSCHHHHEEECCCEECCSSEEEEEEEEEECCHHHHHHCEEEEEE
T ss_pred cCCCCEEEEEEEEccCcCCcccCCCCCEEEEEEEecCCCCCccceeCCcCCCCCCCccccEEEEEcCHHHhCcCEEEEEE
Confidence 345679999999999999999999999999999954 278999999999999999999997433 246899999
Q ss_pred EeeCCCCCCCCccccEEEeceecC-CCCceeEEEEcc
Q 003874 370 FDFDGPFDQATSLGHAEINFLKHT-STELADMWVSLE 405 (790)
Q Consensus 370 ~D~d~~~~~dd~LG~~~i~L~~l~-~~~~~~~w~~L~ 405 (790)
||+|. ++++++||++.++|..+. .+.....||+|.
T Consensus 119 ~d~d~-~~~~d~iG~~~i~l~~l~~~~~~~~~W~~L~ 154 (155)
T 2z0u_A 119 CTTDR-SHLEECLGGAQISLAEVCRSGERSTRWYNLL 154 (155)
T ss_dssp EEECT-TSCEEEEEEEEEECTTSCTTCCCEEEEEEEB
T ss_pred EECCC-CCCCcEEEEEEEEHHHccCCCCccccceEcc
Confidence 99999 899999999999999985 467778999985
No 16
>2d8k_A Synaptotagmin VII; exocytosis, calcium binding, lysosome, C2 domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=5.2e-17 Score=154.55 Aligned_cols=108 Identities=22% Similarity=0.459 Sum_probs=95.9
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeEeeeecccCCCCCeEeeEEEEEeecC---CCCeEEEEEEeeC
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCN---GKTRTSSVQLQTCDPQWHDILEFDAMEE---PPSVLDVEVFDFD 373 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~---~~~~kT~v~~~tlnP~WnE~f~f~v~~~---~~~~L~v~V~D~d 373 (790)
..+.|+|+|++|+||+.++..|.+||||++++. .++++|+++++++||.|||+|.|.+... ....|.|+|||+|
T Consensus 24 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d~d 103 (141)
T 2d8k_A 24 QESTLTVKIMKAQELPAKDFSGTSDPFVKIYLLPDKKHKLETKVKRKNLNPHWNETFLFEGFPYEKVVQRILYLQVLDYD 103 (141)
T ss_dssp SSCCEEEEEEEEESCCCCSSSSCCCEEEEEEEESCCSSEEECCCCTTCSSCCCCEEEEECSCCHHHHTTSEEEEEEEECC
T ss_pred CCCEEEEEEEEeECCCCCCCCCCCCcEEEEEEECCCCccEeCceEcCCCCCccccEEEECccCHHHcccCEEEEEEEECC
Confidence 357899999999999999999999999999993 4688999999999999999999985321 3578999999999
Q ss_pred CCCCCCCccccEEEeceecCCCCceeEEEEccccc
Q 003874 374 GPFDQATSLGHAEINFLKHTSTELADMWVSLEGKL 408 (790)
Q Consensus 374 ~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~ 408 (790)
. ++++++||++.++|..+..+...+.|++|.++.
T Consensus 104 ~-~~~~~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 137 (141)
T 2d8k_A 104 R-FSRNDPIGEVSIPLNKVDLTQMQTFWKDLKPSG 137 (141)
T ss_dssp S-SSSCEEEEEEEEETTTSCTTSCEEEEECCEECC
T ss_pred C-CCCCcEEEEEEEEhhhhcCCCCccEEEECcCCC
Confidence 8 889999999999999998888889999998753
No 17
>2bwq_A Regulating synaptic membrane exocytosis protein 2; C2 domain, neurotransmitter release, transport protein; 1.41A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.69 E-value=5.7e-17 Score=151.61 Aligned_cols=105 Identities=19% Similarity=0.373 Sum_probs=88.0
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeeeecccCCCCCeEeeEEEEEeec-C--CCCeEEEEEE
Q 003874 299 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFDAME-E--PPSVLDVEVF 370 (790)
Q Consensus 299 ~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l-----~~~~~kT~v~~~tlnP~WnE~f~f~v~~-~--~~~~L~v~V~ 370 (790)
...+.|.|+|++|+||++++..|.+||||++++ +..+++|+++++++||.|||+|.|.+.. + ....|.|+||
T Consensus 15 ~~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~~~V~ 94 (129)
T 2bwq_A 15 KVGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLW 94 (129)
T ss_dssp TTTTEEEEEEEEEESCCCCTTSCCBCEEEEEEEESSCSGGGEEECCCCSSBSSCEEEEEEEECSCCGGGGGGCEEEEEEE
T ss_pred cCCCEEEEEEEEeeCCCCCCCCCCCCCEEEEEEecCCCCCcceecccccCCCCCccccEEEEccCCHHHhcCCeEEEEEE
Confidence 345799999999999999999999999999999 4578899999999999999999998522 2 3579999999
Q ss_pred eeCCCCCC--CCccccEEEeceecCCCCceeEEEEcc
Q 003874 371 DFDGPFDQ--ATSLGHAEINFLKHTSTELADMWVSLE 405 (790)
Q Consensus 371 D~d~~~~~--dd~LG~~~i~L~~l~~~~~~~~w~~L~ 405 (790)
|+|. +++ +++||++.++|..+.... .+.||+|+
T Consensus 95 d~d~-~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~Lq 129 (129)
T 2bwq_A 95 DQAR-VREEESEFLGEILIELETALLDD-EPHWYKLQ 129 (129)
T ss_dssp EC--------CEEEEEEEEEGGGCCCSS-CEEEEECC
T ss_pred ECCc-CcCcCCceeEEEEEEccccCCCc-CCccEECc
Confidence 9998 776 999999999999986655 78999984
No 18
>1v27_A Regulating synaptic membrane exocytosis protein 2; RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.69 E-value=5e-17 Score=154.32 Aligned_cols=107 Identities=19% Similarity=0.356 Sum_probs=93.4
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeeeecccCCCCCeEeeEEEEEeec-C--CCCeEEEEEEe
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFDAME-E--PPSVLDVEVFD 371 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l-----~~~~~kT~v~~~tlnP~WnE~f~f~v~~-~--~~~~L~v~V~D 371 (790)
..+.|.|+|++|+||++++..|.+||||++++ +..+++|+++++++||.|||+|.|.+.. + ....|.|+|||
T Consensus 19 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 98 (141)
T 1v27_A 19 VGHQLIVTILGAKDLPSREDGRPRNPYVKIYFLPDRSDKNKRRTKTVKKTLEPKWNQTFIYSPVHRREFRERMLEITLWD 98 (141)
T ss_dssp TTTEEEEEEEEEESCCCCSSSCCCCEEEECCCSSCCSSSSCCBCCCCSSCSSCCCCCCCEECSCCTTGGGTCEEEEEEEE
T ss_pred CCCEEEEEEEEccCCCCcCCCCCCCCEEEEEEecCCCCCcceeCccccCCCCCccccEEEEccCCHHHhcCCEEEEEEEE
Confidence 35789999999999999999999999999998 3568899999999999999999998422 2 34799999999
Q ss_pred eCCCCCC--CCccccEEEeceecCCCCceeEEEEccccc
Q 003874 372 FDGPFDQ--ATSLGHAEINFLKHTSTELADMWVSLEGKL 408 (790)
Q Consensus 372 ~d~~~~~--dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~ 408 (790)
+|. +++ +++||++.++|..+.... .+.||+|.++.
T Consensus 99 ~d~-~~~~~~~~lG~~~i~l~~l~~~~-~~~W~~L~~~~ 135 (141)
T 1v27_A 99 QAR-VREEESEFLGEILIELETALLDD-EPHWYKLQTHD 135 (141)
T ss_dssp BCS-SSSCCBCCCEEEEEEGGGCCCSS-EEEEEECBCCS
T ss_pred CCC-CcCCCCceEEEEEEEccccCCCC-CCceEECcccc
Confidence 998 776 999999999999986654 78999998754
No 19
>1a25_A CALB, protein kinase C (beta); calcium++/phospholipid binding protein, calcium-binding protein; HET: PSE; 2.70A {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=5.4e-17 Score=155.97 Aligned_cols=105 Identities=24% Similarity=0.401 Sum_probs=93.2
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeEeeeecccCCCCCeEeeEEEEEeecC-CCCeEEEEEEeeCC
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCN-----GKTRTSSVQLQTCDPQWHDILEFDAMEE-PPSVLDVEVFDFDG 374 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~-----~~~~kT~v~~~tlnP~WnE~f~f~v~~~-~~~~L~v~V~D~d~ 374 (790)
.+.|+|+|++|+||++++..|.+||||++++. ..+++|+++++++||.|||+|.|.+... ....|.|+|||+|.
T Consensus 30 ~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V~d~d~ 109 (149)
T 1a25_A 30 REVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKCSLNPEWNETFRFQLKESDKDRRLSVEIWDWDL 109 (149)
T ss_dssp SSEEEEEEEEEESCCCCSTTSCCCEEEEEEEESCTTCSSCEECCCCSSCSSCEEEEEEEEECCSGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCcCeEEEEEEECCCCCcceEecceeCCCCCCcCCcEEEEEeccccCCCEEEEEEEECCC
Confidence 46899999999999999999999999999995 4678999999999999999999998543 24689999999999
Q ss_pred CCCCCCccccEEEeceecCCCCceeEEEEcccc
Q 003874 375 PFDQATSLGHAEINFLKHTSTELADMWVSLEGK 407 (790)
Q Consensus 375 ~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k 407 (790)
+++|++||++.++|..+..+ ..+.||+|.+.
T Consensus 110 -~~~~~~iG~~~i~l~~l~~~-~~~~W~~L~~~ 140 (149)
T 1a25_A 110 -TSRNDFMGSLSFGISELQKA-GVDGWFKLLSQ 140 (149)
T ss_dssp -SSCCEEEEEEEEEHHHHTTC-CEEEEEECBCH
T ss_pred -CCCCCEEEEEEEEHHHhCcC-ccCCeEEccCC
Confidence 88999999999999998765 47899999863
No 20
>1rh8_A Piccolo protein; beta-sandwich, metal binding protein; NMR {Rattus norvegicus} SCOP: b.7.1.2
Probab=99.68 E-value=2e-17 Score=157.45 Aligned_cols=106 Identities=22% Similarity=0.399 Sum_probs=93.8
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe--------------EeeeecccCCCCCeEeeEEEEE-eecC--CCC
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGK--------------TRTSSVQLQTCDPQWHDILEFD-AMEE--PPS 363 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~--------------~~kT~v~~~tlnP~WnE~f~f~-v~~~--~~~ 363 (790)
.+.|.|+|++|+||+++|..|.+||||++++... +++|+++++++||.|||+|.|. +..+ ...
T Consensus 17 ~~~L~V~v~~a~~L~~~d~~g~~Dpyv~v~~~~~~~~~~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~l~~~ 96 (142)
T 1rh8_A 17 LGNLIIHILQARNLVPRDNNGYSDPFVKVYLLPGRGQVMVVQNASAEYKRRTKYVQKSLNPEWNQTVIYKSISMEQLMKK 96 (142)
T ss_dssp TTEEEEEEEEEESCCCCSSSSCSCCEEEEEETTSSCCCEECCCCCHHHHTTTTTTHHHHSCEEEEEEEECSCCHHHHTTC
T ss_pred CCEEEEEEEEecCCCCCCCCCCCCceEEEEEecCCCcccccccccccceeeccccCCCCCCCCCCEEEECCcCHHHccCC
Confidence 4689999999999999999999999999999642 5799999999999999999997 5322 467
Q ss_pred eEEEEEEeeCCCCCCCCccccEEEeceecCCCCceeEEEEcccc
Q 003874 364 VLDVEVFDFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGK 407 (790)
Q Consensus 364 ~L~v~V~D~d~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k 407 (790)
.|.|+|||+|. ++++++||++.++|..+..+...+.||+|.++
T Consensus 97 ~l~i~V~d~d~-~~~~~~lG~~~i~l~~l~~~~~~~~W~~L~~~ 139 (142)
T 1rh8_A 97 TLEVTVWDYDR-FSSNDFLGEVLIDLSSTSHLDNTPRWYPLKEQ 139 (142)
T ss_dssp EEEEEEEEECS-SSCEEEEEEEEEETTSCGGGTTCCEEEECBCC
T ss_pred EEEEEEEECCC-CCCCceEEEEEEeccccccCCCCCeEEECCcc
Confidence 99999999999 88999999999999998777778899999874
No 21
>2nq3_A Itchy homolog E3 ubiquitin protein ligase; C2 domain, UBL conjugation pathway, structural genomics consortium, SGC; 1.80A {Homo sapiens} SCOP: b.7.1.1
Probab=99.68 E-value=1.3e-16 Score=157.55 Aligned_cols=119 Identities=16% Similarity=0.230 Sum_probs=98.2
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeecccCCCCCeEeeEEEEEeecCCCCeEEEEEEeeCCCCCCC
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFDQA 379 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d~~~~~d 379 (790)
..+.|+|+|++|++|++.+..+.+||||++++++++++|+++++++||.|||+|.|.+ .+...|.|+|||+|. +++|
T Consensus 34 ~~~~L~V~V~~A~~L~~~~~~~~sDPYv~v~~~~~~~kT~v~~~tlnP~Wne~f~f~v--~~~~~L~~~V~D~d~-~~~d 110 (173)
T 2nq3_A 34 MKSQLQITVISAKLKENKKNWFGPSPYVEVTVDGQSKKTEKCNNTNSPKWKQPLTVIV--TPVSKLHFRVWSHQT-LKSD 110 (173)
T ss_dssp CCEEEEEEEEEEEECCCC--CCCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEE--CTTCEEEEEEEECCS-SSCC
T ss_pred CceEEEEEEEEeECCCCcccCCCCCeEEEEEECCEEeEccccCCCCCCeECCEEEEEe--CCCCEEEEEEEECCC-CCCC
Confidence 4678999999999999444445599999999999999999999999999999999987 348899999999998 8899
Q ss_pred CccccEEEeceecCCC---C--ceeEEEEccccc-cCcCCceeEEEEE
Q 003874 380 TSLGHAEINFLKHTST---E--LADMWVSLEGKL-AQSAQSKVHLRIF 421 (790)
Q Consensus 380 d~LG~~~i~L~~l~~~---~--~~~~w~~L~~k~-~~~~~G~l~L~i~ 421 (790)
++||++.++|..+..+ . ....|++|..+. .....|+|++.+.
T Consensus 111 d~lG~~~i~l~~l~~~~~~~~~~~~~~~~L~~~~~~~~~~G~L~v~l~ 158 (173)
T 2nq3_A 111 VLLGTAALDIYETLKSNNMKLEEVVVTLQLGGDKEPTETIGDLSICLD 158 (173)
T ss_dssp EEEEEEEEEHHHHHHHTTTEESSEEEEEEEEESSCTTSEEEEEEEEEE
T ss_pred ceEEEEEEEHHHhcccCCCCcceeEEEEECccCCCCCcccEEEEEEEe
Confidence 9999999999987432 1 126799997652 2234688888884
No 22
>3rdl_A Protein kinase C alpha type; protein kinase PKC, transferase; 1.50A {Rattus norvegicus} PDB: 3gpe_A 3rdj_A 3twy_A 1dsy_A* 4dnl_A* 2uzp_A*
Probab=99.68 E-value=1e-16 Score=151.43 Aligned_cols=105 Identities=25% Similarity=0.407 Sum_probs=93.8
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeeeecccCCCCCeEeeEEEEEeecC-CCCeEEEEEEeeCC
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFDAMEE-PPSVLDVEVFDFDG 374 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l-----~~~~~kT~v~~~tlnP~WnE~f~f~v~~~-~~~~L~v~V~D~d~ 374 (790)
.+.|.|+|++|+||++++..|.+||||++.+ +..+++|+++++++||.|||+|.|.+... ....|.|+|||+|.
T Consensus 15 ~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~~~~~~~~~~l~i~v~d~d~ 94 (137)
T 3rdl_A 15 DEKLHVTVRDAKNLIPMDPNGLSDPYVKLKLIPDPKNESKQKTKTIRSTLNPQWNESFTFKLKPSDKDRRLSVEIWDWDR 94 (137)
T ss_dssp TTEEEEEEEEEESCCCCSTTSCCCEEEEEEEECCTTCCCCEECCCCCSCSSCEEEEEEEEECCGGGGGCEEEEEEEECCS
T ss_pred CCEEEEEEEEeeCCCCCCCCCCCCeeEEEEEEcCCCCCeeecCceEcCCCCCCcccEEEEEcCchhcCCEEEEEEEECCC
Confidence 4789999999999999999999999999999 56688999999999999999999997543 34589999999998
Q ss_pred CCCCCCccccEEEeceecCCCCceeEEEEcccc
Q 003874 375 PFDQATSLGHAEINFLKHTSTELADMWVSLEGK 407 (790)
Q Consensus 375 ~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k 407 (790)
++++++||++.++|..+..+. .+.|++|.++
T Consensus 95 -~~~~~~iG~~~i~l~~l~~~~-~~~W~~L~~~ 125 (137)
T 3rdl_A 95 -TTRNDFMGSLSFGVSELMKMP-ASGWYKLLNQ 125 (137)
T ss_dssp -SSCCEEEEEEEEEHHHHHHSC-EEEEEECBCH
T ss_pred -CCCCceEEEEEEeHHHhccCc-cCceEECcCc
Confidence 889999999999999986655 7899999864
No 23
>2q3x_A Regulating synaptic membrane exocytosis protein 1; C2 domain dimer, neurotransmitter release, transport protein; HET: MSE; 1.73A {Rattus norvegicus}
Probab=99.67 E-value=1.3e-16 Score=157.29 Aligned_cols=106 Identities=22% Similarity=0.295 Sum_probs=94.0
Q ss_pred ceEEEEEEEEeecCCCCCC-CCCCCcEEEEEECC-----eEeeeecccCCCCCeEeeEEEEEeecCCCCeEEEEEE-eeC
Q 003874 301 GWVLTVALVEGVNLASSEM-TGLSDPYVVFTCNG-----KTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVF-DFD 373 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~-~g~sDPyV~v~l~~-----~~~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~-D~d 373 (790)
.+.|.|+|++|+||+++|. .|.+||||++++.. .+++|+++++++||.|||+|.|.+ ......|.|+|| |+|
T Consensus 29 ~~~L~V~v~~a~~L~~~d~~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v-~~~~~~L~~~V~~d~d 107 (171)
T 2q3x_A 29 KGQLEVEVIRARSLTQKPGSKSTPAPYVKVYLLENGACIAKKKTRIARKTLDPLYQQSLVFDE-SPQGKVLQVIVWGDYG 107 (171)
T ss_dssp TTEEEEEEEEEESCCCCC---CCCEEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEECSS-CCTTEEEEEEEEEECS
T ss_pred CCEEEEEEEEeeCCCCCCcCCCCCCceEEEEEECCCccccceeCccCCCCCCCCCCcEEEEEe-cCCCCEEEEEEEEcCC
Confidence 5689999999999999995 79999999999842 378999999999999999999997 445689999999 999
Q ss_pred CCCCCCCccccEEEeceecCCCCceeEEEEccccc
Q 003874 374 GPFDQATSLGHAEINFLKHTSTELADMWVSLEGKL 408 (790)
Q Consensus 374 ~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~ 408 (790)
. +++|++||++.++|..+..+...+.||+|.++.
T Consensus 108 ~-~~~d~~iG~~~i~l~~l~~~~~~~~W~~L~~~~ 141 (171)
T 2q3x_A 108 R-MDHKCFMGVAQILLEELDLSSMVIGWYKLFPPS 141 (171)
T ss_dssp T-TCSSEEEEEEEECGGGSCTTSCEEEEEECBCGG
T ss_pred C-CCCCCEEEEEEEEHHHcccCCCcceeEECCCcc
Confidence 8 899999999999999998788889999998754
No 24
>2chd_A Rabphilin-3A, exophilin-1; C2 domain, C2A, calcium binding, synaptic EXOC metal-binding, protein transport, synapse, transport, zinc-; 1.92A {Rattus norvegicus} PDB: 2k3h_A
Probab=99.67 E-value=1.4e-16 Score=151.73 Aligned_cols=106 Identities=23% Similarity=0.396 Sum_probs=94.7
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeeeecccCCCCCeEeeEEEEE-eecCC--CCeEEEEEEe
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG-----KTRTSSVQLQTCDPQWHDILEFD-AMEEP--PSVLDVEVFD 371 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~-----~~~kT~v~~~tlnP~WnE~f~f~-v~~~~--~~~L~v~V~D 371 (790)
..+.|.|+|++|+||++++..|.+||||++++.. .+++|+++++++||.|||+|.|. +..+. ...|.|+|||
T Consensus 27 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~~~~~~~~~~~l~i~V~d 106 (142)
T 2chd_A 27 DNSNLQCTIIRAKGLKPMDSNGLADPYVKLHLLPGASKSNKLRTKTLRNTRNPVWNETLQYHGITEEDMQRKTLRISVCD 106 (142)
T ss_dssp GGTEEEEEEEEEESCCCCCTTSCCCEEEEEEEESCCSGGGEEECCCCCSCSSCEEEEEEEEESCCHHHHHHCEEEEEEEE
T ss_pred CCCEEEEEEEEecCCCCCCCCCCCCCEEEEEEEcCCCCcceeeCCcCCCCCCCcCcCEEEEcccCHHHccCCEEEEEEEE
Confidence 4578999999999999999999999999999964 68899999999999999999998 42221 3689999999
Q ss_pred eCCCCCCCCccccEEEeceecCCCCceeEEEEccc
Q 003874 372 FDGPFDQATSLGHAEINFLKHTSTELADMWVSLEG 406 (790)
Q Consensus 372 ~d~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~ 406 (790)
+|. +++|++||++.++|..+..+.....|++|+.
T Consensus 107 ~d~-~~~d~~iG~~~i~l~~l~~~~~~~~~~~L~~ 140 (142)
T 2chd_A 107 EDK-FGHNEFIGETRFSLKKLKANQRKNFNICLER 140 (142)
T ss_dssp ECT-TSCEEEEEEEEEEGGGCCTTCCEEEEEECBC
T ss_pred CCC-CCCCcEEEEEEEEHHHcCCCCccEEEEeccc
Confidence 998 8899999999999999998888899999975
No 25
>1wfm_A Synaptotagmin XIII; C2 domain, exocytosis, neurotransmitter release, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.67 E-value=2.4e-16 Score=149.63 Aligned_cols=104 Identities=20% Similarity=0.262 Sum_probs=90.9
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---C-eEeeeecccCCCCCeEeeEEEEEeecCC--CCeEEEEEEeeC
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCN---G-KTRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVFDFD 373 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~---~-~~~kT~v~~~tlnP~WnE~f~f~v~~~~--~~~L~v~V~D~d 373 (790)
..+.|+|+|++|+ ++|..|.+||||++++. + .+++|+++++++||.|||+|.|.+..+. ...|.|+|||+|
T Consensus 24 ~~~~L~V~v~~a~---~~d~~g~sDPyv~v~l~~~~~~~~~kT~v~~~tlnP~wnE~f~f~v~~~~l~~~~L~~~V~d~d 100 (138)
T 1wfm_A 24 QKAELFVTRLEAV---TSNHDGGCDCYVQGSVANRTGSVEAQTALKKRQLHTTWEEGLVLPLAEEELPTATLTLTLRTCD 100 (138)
T ss_dssp TTTEEEEEEEEEE---CCCCSSCCCEEEEEEEEETTEEEEEECCCCCCCSSEECSSCEEEECCTTSSTTCEEEEEEEECC
T ss_pred CCCEEEEEEEEEE---cCCCCCCcceEEEEEEEcCCCcccEecccCcCCCCCcCCceEEEEecHHHcCCCEEEEEEEECC
Confidence 4578999999999 46778999999999983 2 3679999999999999999999975432 468999999999
Q ss_pred CCCCCCCccccEEEeceecCCCCceeEEEEcccc
Q 003874 374 GPFDQATSLGHAEINFLKHTSTELADMWVSLEGK 407 (790)
Q Consensus 374 ~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k 407 (790)
. +++|++||++.++|..+..+...+.|++|.+.
T Consensus 101 ~-~~~dd~lG~~~i~l~~l~~~~~~~~W~~L~~~ 133 (138)
T 1wfm_A 101 R-FSRHSVAGELRLGLDGTSVPLGAAQWGELKTS 133 (138)
T ss_dssp S-SCTTSCSEEEEEESSSSSSCTTCCEEEECCCC
T ss_pred C-CCCCcEEEEEEEEcccccCcccccceeeCcCC
Confidence 9 89999999999999999777788999999874
No 26
>3fbk_A RGS3, RGP3, regulator of G-protein signaling 3; all beta-sheet fold, structural genomics, PSI-2, protein structure initiative; 2.00A {Homo sapiens} SCOP: b.7.1.0
Probab=99.67 E-value=2e-16 Score=152.84 Aligned_cols=111 Identities=21% Similarity=0.325 Sum_probs=95.2
Q ss_pred cccCCceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeeeecccCCCCCeEeeEEEEEeec-CCCCeEEEEE
Q 003874 296 KAQGDGWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFDAME-EPPSVLDVEV 369 (790)
Q Consensus 296 ~~~~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l-----~~~~~kT~v~~~tlnP~WnE~f~f~v~~-~~~~~L~v~V 369 (790)
.+....+.|.|+|++|+||++.+ .|.+||||++.+ ...+++|+++++++||.|||+|.|.+.. +....|.|+|
T Consensus 21 ~y~~~~~~L~V~v~~a~~L~~~d-~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~~~~~L~i~V 99 (153)
T 3fbk_A 21 SIDAQDRVLLLHIIEGKGLISKQ-PGTCDPYVKISLIPEDSRLRHQKTQTVPDCRDPAFHEHFFFPVQEEDDQKRLLVTV 99 (153)
T ss_dssp EEEESSSEEEEEEEEEESCCCCS-SSCCCEEEEEEEESCSCCTTCEECCCCTTCSSCEEEEEEEEECCGGGTTSEEEEEE
T ss_pred EEECCCCEEEEEEEEeeCCCCCC-CCCCCEEEEEEEEcCCCCccEEeccccCCCCCCccccEEEEecccHHhCCEEEEEE
Confidence 44556789999999999999999 699999999998 2457899999999999999999999743 2346799999
Q ss_pred EeeCCCCCC-CCccccEEEeceecCC-CCceeEEEEccccc
Q 003874 370 FDFDGPFDQ-ATSLGHAEINFLKHTS-TELADMWVSLEGKL 408 (790)
Q Consensus 370 ~D~d~~~~~-dd~LG~~~i~L~~l~~-~~~~~~w~~L~~k~ 408 (790)
||+|. +++ |++||++.++|..+.. +...+.||+|.++.
T Consensus 100 ~d~d~-~~~~d~~lG~~~i~l~~l~~~~~~~~~W~~L~~~~ 139 (153)
T 3fbk_A 100 WNRAS-QSRQSGLIGCMSFGVKSLLTPDKEISGWYYLLGEH 139 (153)
T ss_dssp EECCS-SGGGCEEEEEEEEEHHHHTC--CCEEEEEECBCTT
T ss_pred EeCCC-CCCCCcEEEEEEEEHHHhcCCCCccccEEECCChh
Confidence 99998 776 9999999999999974 67788999998753
No 27
>2dmg_A KIAA1228 protein; beta-sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=1.3e-16 Score=151.86 Aligned_cols=107 Identities=23% Similarity=0.280 Sum_probs=92.4
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC-----CeEeeeecccCCCCCeEeeEEEEEeecC--CCCeEEEEEEee
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCN-----GKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDF 372 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~-----~~~~kT~v~~~tlnP~WnE~f~f~v~~~--~~~~L~v~V~D~ 372 (790)
..+.|.|+|++|+||++++..| +||||++++. ..+++|+++++++||.|||+|.|.+..+ ....|.|+|||+
T Consensus 22 ~~~~L~v~v~~a~~L~~~d~~g-~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 100 (142)
T 2dmg_A 22 QRNKLIVVVHACRNLIAFSEDG-SDPYVRMYLLPDKRRSGRRKTHVSKKTLNPVFDQSFDFSVSLPEVQRRTLDVAVKNS 100 (142)
T ss_dssp TTTEEEEEEEEEECCCCSSTTC-CCEEEEEEEESCCCSSSCEECCCCCSCSSCEEEEEEEECCCHHHHHHCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCCCCCC-CCeeEEEEEEcCCCCCCcccCCccCCCCCCCcCceEEEEecHHHhCcCEEEEEEEEC
Confidence 3578999999999999999888 9999999983 2578999999999999999999987432 235899999999
Q ss_pred CCCCCC--CCccccEEEeceecCCCCceeEEEEccccc
Q 003874 373 DGPFDQ--ATSLGHAEINFLKHTSTELADMWVSLEGKL 408 (790)
Q Consensus 373 d~~~~~--dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~ 408 (790)
|. +++ +++||++.++|..+..+...+.|++|.++.
T Consensus 101 d~-~~~~~~~~iG~~~i~l~~~~~~~~~~~W~~L~~~~ 137 (142)
T 2dmg_A 101 GG-FLSKDKGLLGKVLVALASEELAKGWTQWYDLTEDS 137 (142)
T ss_dssp CC-SSCCSCCCCEEEEEECCCSTTTTCBCCBCCCBCSC
T ss_pred CC-ccccCCcEEEEEEEecccccccccccceeeccCCC
Confidence 98 653 579999999999987777788999998754
No 28
>1ugk_A Synaptotagmin IV, KIAA1342; beta sandwich, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.7.1.2
Probab=99.66 E-value=5.6e-16 Score=146.83 Aligned_cols=107 Identities=20% Similarity=0.239 Sum_probs=92.0
Q ss_pred CceEEEEEEEEeecCCCCCCC-CCCCcEEEEEEC---CeEeeeecccCCCCCeEeeEEEEE-eecC--CCCeEEEEEEee
Q 003874 300 DGWVLTVALVEGVNLASSEMT-GLSDPYVVFTCN---GKTRTSSVQLQTCDPQWHDILEFD-AMEE--PPSVLDVEVFDF 372 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~-g~sDPyV~v~l~---~~~~kT~v~~~tlnP~WnE~f~f~-v~~~--~~~~L~v~V~D~ 372 (790)
..+.|.|+|++|+||+++|.. |.+||||++++. .++++|+++++++||.|||+|.|. +..+ ....|.|+|||+
T Consensus 20 ~~~~L~v~v~~a~~L~~~d~~~~~~dpyv~v~~~~~~~~~~kT~v~~~t~nP~wne~f~f~~v~~~~~~~~~l~i~V~d~ 99 (138)
T 1ugk_A 20 ERKAFVVNIKEARGLPAMDEQSMTSDPYIKMTILPEKKHKVKTRVLRKTLDPAFDETFTFYGIPYTQIQELALHFTILSF 99 (138)
T ss_dssp GGTEEEEEEEEEESCCCCBTTTTBCEEEEEEEEETTTCSEEECCCCSSCSSCEEEEEEEEECCCSTTGGGCEEEEEEEEE
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCCCEEEEEEecCCCceEecCcCcCCCCCcEeeEEEEcCcCHHHhccCEEEEEEEEC
Confidence 356899999999999999985 899999999995 468899999999999999999996 5333 246899999999
Q ss_pred CCCCCCCCccccEEEeceecCCCC-ceeEEEEcccc
Q 003874 373 DGPFDQATSLGHAEINFLKHTSTE-LADMWVSLEGK 407 (790)
Q Consensus 373 d~~~~~dd~LG~~~i~L~~l~~~~-~~~~w~~L~~k 407 (790)
|. +++|++||++.++|..+..+. ....|++|..+
T Consensus 100 d~-~~~~~~lG~~~i~l~~l~~~~~~~~~~~~l~~~ 134 (138)
T 1ugk_A 100 DR-FSRDDIIGEVLIPLSGIELSEGKMLMNREIISG 134 (138)
T ss_dssp CS-SCCCCCCEEEEEECTTCCCTTCCEEEEEECBSS
T ss_pred CC-CCCCcEEEEEEEehhHccCCCCcchhhhhhhcC
Confidence 98 899999999999999987654 44678999864
No 29
>2enp_A B/K protein; C2 type 1,beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.64 E-value=1.8e-16 Score=151.86 Aligned_cols=108 Identities=20% Similarity=0.278 Sum_probs=92.6
Q ss_pred CceEEEEEEEEeecCCCC-CC------CCCCCcEEEEEEC---CeEeeeecccCCCCCeEeeEEEEEeecC--CCCeEEE
Q 003874 300 DGWVLTVALVEGVNLASS-EM------TGLSDPYVVFTCN---GKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDV 367 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~-d~------~g~sDPyV~v~l~---~~~~kT~v~~~tlnP~WnE~f~f~v~~~--~~~~L~v 367 (790)
..+.|.|+|++|+||++. +. .|.+||||++++. .++++|+++++++||.|||+|.|.+..+ ....|.|
T Consensus 24 ~~~~L~V~v~~a~~L~~~~d~~g~~~~~~~~dpyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~ 103 (147)
T 2enp_A 24 LHNHLTVRVIEARDLPPPISHDGSRQDMAHSNPYVKICLLPDQKNSKQTGVKRKTQKPVFEERYTFEIPFLEAQRRTLLL 103 (147)
T ss_dssp TTTEEEEEEEEEECCCCSCSSCCSSCTTCCCCCEEEEEEETCCSSCEECCCCCSCSSCCCCBCCEECCCHHHHHHSEEEE
T ss_pred CCCEEEEEEEEEeCCCCccccccccccCCCCCcEEEEEEEeCCCcceEeecccCCCCCeEeeeEEEEeChHHhccCEEEE
Confidence 357899999999999984 43 3589999999995 4578999999999999999999987432 2358999
Q ss_pred EEEeeCCCCCCCCccccEEEeceecCCCCceeEEEEccccc
Q 003874 368 EVFDFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKL 408 (790)
Q Consensus 368 ~V~D~d~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~ 408 (790)
+|||+|. ++++++||++.++|..+......+.|++|.++.
T Consensus 104 ~V~d~d~-~~~~~~iG~~~i~l~~l~~~~~~~~w~~L~~~~ 143 (147)
T 2enp_A 104 TVVDFDK-FSRHCVIGKVSVPLCEVDLVKGGHWWKALIPSG 143 (147)
T ss_dssp EEECCST-TCCSCCCEEEEEETTTSCTTTCCCEEECCBCCC
T ss_pred EEEECCC-CcCCcEEEEEEEechhcCCCCCccEEEEeecCC
Confidence 9999998 899999999999999997777778999998753
No 30
>2cm5_A Rabphilin-3A; protein transport, zinc-finger, Ca2+ binding, metal-binding, synaptic exocytosis, C2A-C2B linker fragment, C2B, zinc, synapse; 1.28A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 2cm6_A 3rpb_A
Probab=99.64 E-value=8.4e-16 Score=150.46 Aligned_cols=107 Identities=20% Similarity=0.386 Sum_probs=91.1
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeeeecccCCCCCeEeeEEEEEeecCC--CCeEEEEEEee
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG-----KTRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVFDF 372 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~-----~~~kT~v~~~tlnP~WnE~f~f~v~~~~--~~~L~v~V~D~ 372 (790)
..+.|.|+|++|+||++++..|.+||||++++.. .+++|+++++++||.|||+|.|.+..+. ...|.|+|||+
T Consensus 35 ~~~~L~V~v~~a~~L~~~d~~g~~DPyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 114 (166)
T 2cm5_A 35 QQGGLIVGIIRCVHLAAMDANGYSDPFVKLWLKPDMGKKAKHKTQIKKKTLNPEFNEEFFYDIKHSDLAKKSLDISVWDY 114 (166)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEETC---CCEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCccCCCCCCcEEEEEEECCCCccceEeCCcccCCCCCcccceEEEEcchHhcCCCEEEEEEEEC
Confidence 4578999999999999999999999999999964 6889999999999999999999985432 46899999999
Q ss_pred CCCCCCCCccccEEEeceec------------CCCCceeEEEEcccc
Q 003874 373 DGPFDQATSLGHAEINFLKH------------TSTELADMWVSLEGK 407 (790)
Q Consensus 373 d~~~~~dd~LG~~~i~L~~l------------~~~~~~~~w~~L~~k 407 (790)
|. ++++++||++.+++..+ ..+.....|++|.++
T Consensus 115 d~-~~~~~~iG~~~i~l~~~~~~~~~W~~l~~~~~~~~~~Wh~L~~~ 160 (166)
T 2cm5_A 115 DI-GKSNDYIGGCQLGISAKGERLKHWYECLKNKDKKIERWHQLQNE 160 (166)
T ss_dssp CS-SSCCEEEEEEEEETTCCHHHHHHHHHHHHCTTCCEEEEEECBC-
T ss_pred CC-CCCCcEEEeEEEecccCCchhHHHHHHHhCCCCcceEeeECCCc
Confidence 98 88999999999999875 234555667777654
No 31
>1tjx_A Similar to synaptotagmini/P65; C2B domain, calcium binding, endocytosis-EX complex; HET: GOL; 1.04A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1tjm_A* 1uov_A 1uow_A 1k5w_A 2lha_A*
Probab=99.64 E-value=9.9e-16 Score=148.78 Aligned_cols=107 Identities=24% Similarity=0.446 Sum_probs=91.9
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eEeeeecccCCCCCeEeeEEEEEeecCC--CCeEEEEEEee
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCN--G---KTRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVFDF 372 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~--~---~~~kT~v~~~tlnP~WnE~f~f~v~~~~--~~~L~v~V~D~ 372 (790)
..+.|.|+|++|+||++++..|.+||||++++. + .+++|+++++++||.|||+|.|.+..+. ...|.|+|||+
T Consensus 23 ~~~~L~V~v~~a~~L~~~d~~g~~dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 102 (159)
T 1tjx_A 23 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 102 (159)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCGGGGGGCEEEEEEEEC
T ss_pred CCCEEEEEEEEeeCCCCccCCCCCCeEEEEEEEeCCceeceeeCceecCCCCCcccceEEEEcCHHHhCCcEEEEEEEEC
Confidence 457899999999999999999999999999984 2 4679999999999999999999985432 45799999999
Q ss_pred CCCCCCCCccccEEEeceec------------CCCCceeEEEEcccc
Q 003874 373 DGPFDQATSLGHAEINFLKH------------TSTELADMWVSLEGK 407 (790)
Q Consensus 373 d~~~~~dd~LG~~~i~L~~l------------~~~~~~~~w~~L~~k 407 (790)
|. +++|++||++.|++..+ ..+...+.|++|.+.
T Consensus 103 d~-~~~~~~iG~~~i~l~~~~~~~~~w~~l~~~~~~~~~~W~~L~~~ 148 (159)
T 1tjx_A 103 DK-IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 148 (159)
T ss_dssp CS-SSCCEEEEEEEEETTCCHHHHHHHHHHHHSTTCCEEEEEECBCH
T ss_pred CC-CCCCceEEEEEECCCCCCcHHHHHHHHHHCCCCeeeeEEECcCc
Confidence 99 89999999999999853 345567889999764
No 32
>3n5a_A Synaptotagmin-7; calcium/phospholipid binding protein, protein transport; 1.44A {Mus musculus}
Probab=99.64 E-value=7.1e-16 Score=145.64 Aligned_cols=93 Identities=18% Similarity=0.334 Sum_probs=82.4
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-----eEeeeecccCCCCCeEeeEEEEEeecCC--CCeEEEEEEe
Q 003874 299 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG-----KTRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVFD 371 (790)
Q Consensus 299 ~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~-----~~~kT~v~~~tlnP~WnE~f~f~v~~~~--~~~L~v~V~D 371 (790)
...+.|.|+|++|+||+..+..|.+||||++++.. .+++|+++++++||.|||+|.|.+..+. ...|.|+|||
T Consensus 13 ~~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~~~~~t~nP~wne~f~f~v~~~~l~~~~l~~~V~d 92 (138)
T 3n5a_A 13 PSANSIIVNIIKARNLKAMDIGGTSDPYVKVWLMYKDKRVEKKKTVTKKRNLNPIFNESFAFDIPTEKLRETTIIITVMD 92 (138)
T ss_dssp TTTTEEEEEEEEEESCCCCBTTTBCCEEEEEEEEETTEEEEEEECCCCSSCSSCEEEEEEEEECCGGGGGGEEEEEEEEE
T ss_pred CCCCeEEEEEEEeeCCCCcCCCCCcCeEEEEEEEeCCCccceEeCccccCCCCCcCcceEEEECChhhcCceEEEEEEEE
Confidence 34679999999999999999999999999999853 4789999999999999999999975443 3689999999
Q ss_pred eCCCCCCCCccccEEEeceec
Q 003874 372 FDGPFDQATSLGHAEINFLKH 392 (790)
Q Consensus 372 ~d~~~~~dd~LG~~~i~L~~l 392 (790)
+|. +++|++||++.+++..+
T Consensus 93 ~~~-~~~~~~lG~~~i~l~~~ 112 (138)
T 3n5a_A 93 KDK-LSRNDVIGKIYLSWKSG 112 (138)
T ss_dssp CCS-SSCCEEEEEEEESSSSC
T ss_pred CCC-CCCCcEEEEEEEccccC
Confidence 998 88999999999999864
No 33
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.63 E-value=2.5e-15 Score=159.81 Aligned_cols=124 Identities=20% Similarity=0.335 Sum_probs=107.1
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC---CeEeeeecccCCCCCeEeeEEEEEeecC--CCCeEEEEEEeeCC
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCN---GKTRTSSVQLQTCDPQWHDILEFDAMEE--PPSVLDVEVFDFDG 374 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~---~~~~kT~v~~~tlnP~WnE~f~f~v~~~--~~~~L~v~V~D~d~ 374 (790)
..+.|+|+|++|+||+++|..|.+||||+++++ .++++|+++++++||.|||+|.|.+..+ ....|.|+|||+|.
T Consensus 17 ~~~~L~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~T~~~~~~~nP~wne~f~f~v~~~~~~~~~l~~~V~d~d~ 96 (284)
T 2r83_A 17 QNNQLLVGIIQAAELPALDMGGTSDPYVKVFLLPDKKKKFETKVHRKTLNPVFNEQFTFKVPYSELAGKTLVMAVYDFDR 96 (284)
T ss_dssp TTTEEEEEEEEEECCCCCSSSSSCCEEEEEEEETCTTSCEECCCCCSCSSCEEEEEEEECCCGGGCTTCEEEEEEEECCS
T ss_pred CCCEEEEEEEEeeCCCCCCCCCCCCeEEEEEEEcCCCceEeCCcccCCCCCeeCceEEEEechHHhCcCEEEEEEEECCC
Confidence 457999999999999999999999999999995 3578999999999999999999997543 35799999999998
Q ss_pred CCCCCCccccEEEeceecCCCCceeEEEEcccccc--CcCCceeEEEEEEec
Q 003874 375 PFDQATSLGHAEINFLKHTSTELADMWVSLEGKLA--QSAQSKVHLRIFLEN 424 (790)
Q Consensus 375 ~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~~--~~~~G~l~L~i~l~~ 424 (790)
+++|++||++.++|..+..+...+.|++|.+..+ ....|.|++.+.+..
T Consensus 97 -~~~~~~lG~~~i~l~~l~~~~~~~~w~~L~~~~~~~~~~~G~i~l~l~~~p 147 (284)
T 2r83_A 97 -FSKHDIIGEFKVPMNTVDFGHVTEEWRDLQSAEKEEQEKLGDICFSLRYVP 147 (284)
T ss_dssp -SSCCCEEEEEEEEGGGCCCSSCEEEEEECBCCSSCCCCCCCEEEEEEEEET
T ss_pred -CCCCceeEEEEEcchhcccCCcceeEEEeeccccccccccccEEEEEEecC
Confidence 8899999999999999988888899999986532 235688888886654
No 34
>1w15_A Synaptotagmin IV; metal binding protein, endocytosis/exocytosis neurotransmitter release, transmembrane; 1.93A {Rattus norvegicus} SCOP: b.7.1.2 PDB: 1w16_A
Probab=99.62 E-value=2.7e-15 Score=144.67 Aligned_cols=103 Identities=21% Similarity=0.320 Sum_probs=80.3
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe---EeeeecccCCCCCeEeeEEEEEeecCC--CCeEEEEEEee
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTC--NGK---TRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVFDF 372 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l--~~~---~~kT~v~~~tlnP~WnE~f~f~v~~~~--~~~L~v~V~D~ 372 (790)
..+.|.|+|++|+||+.++..|.+||||++++ ++. +++|+++++++||.|||+|.|.+..+. ...|.|+|||+
T Consensus 28 ~~~~L~v~v~~a~~L~~~d~~g~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~v~V~d~ 107 (153)
T 1w15_A 28 TTNTLTVVVLKARHLPKSDVSGLSDPYVKVNLYHAKKRISKKKTHVKKCTPNAVFNELFVFDIPCESLEEISVEFLVLDS 107 (153)
T ss_dssp TTTEEEEEEEEEESCC------CCCEEEEEEEEETTEEEEEEECCCCCSCSSEEEEEEEEEECCSSSSTTEEEEEEEEEC
T ss_pred CCCEEEEEEEEeECCCCcCCCCCCCeEEEEEEEeCCeEeceEecCcccCCCCCeecceEEEECCHHHhCceEEEEEEEeC
Confidence 45789999999999999999999999999998 333 679999999999999999999985442 36899999999
Q ss_pred CCCCCCCCccccEEEeceecCCCCceeEEEEcc
Q 003874 373 DGPFDQATSLGHAEINFLKHTSTELADMWVSLE 405 (790)
Q Consensus 373 d~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~ 405 (790)
|. ++++++||++.+++.. .+...+.|++|.
T Consensus 108 d~-~~~~~~lG~~~i~l~~--~~~~~~~W~~l~ 137 (153)
T 1w15_A 108 ER-GSRNEVIGRLVLGATA--EGSGGGHWKEIC 137 (153)
T ss_dssp CT-TSCCEEEEEEEESTTC--CSHHHHHHHHHH
T ss_pred CC-CCCCcEEEEEEECCCC--CchHHHHHHHHH
Confidence 98 8899999999999987 223334454443
No 35
>3jzy_A Intersectin 2; C2 domain, structural genomics consortium (SGC), endocytosis; 1.56A {Homo sapiens} PDB: 3qbv_B* 1ki1_B
Probab=99.60 E-value=3.8e-15 Score=171.49 Aligned_cols=119 Identities=24% Similarity=0.305 Sum_probs=106.4
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeecccCCCCCeEeeEEEEEeecCCCCeEEEEEEeeCCCCCCC
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFDQA 379 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d~~~~~d 379 (790)
..+.|+|+|++|++|+++|..|.+||||++.+++++++|+++++++||.|||+|.|.+.......|.|+|||+|. +++|
T Consensus 385 ~~~~l~v~v~~a~~L~~~d~~~~sdpyv~v~~~~~~~~T~~~~~t~nP~w~e~f~f~~~~~~~~~l~~~v~d~d~-~~~~ 463 (510)
T 3jzy_A 385 GIGRLMVHVIEATELKACKPNGKSNPYCEISMGSQSYTTRTIQDTLNPKWNFNCQFFIKDLYQDVLCLTLFDRDQ-FSPD 463 (510)
T ss_dssp -CEEEEEEEEEEESCCCCSTTSCCCEEEEEEETTEEEECCCCSSCSSCEEEEEEEEEESCTTTCEEEEEEEECCS-SSSC
T ss_pred CCceEEEEeceeecCCCCCCCCCCCeEEEEEECCeeccCCccCCCCCCccCceEEEEecCCCCCEEEEEEEeCCC-CCCC
Confidence 467999999999999999999999999999999999999999999999999999999866666889999999999 8999
Q ss_pred CccccEEEeceecCCCCc----eeEEEEccccccCcCCceeEEEEEEe
Q 003874 380 TSLGHAEINFLKHTSTEL----ADMWVSLEGKLAQSAQSKVHLRIFLE 423 (790)
Q Consensus 380 d~LG~~~i~L~~l~~~~~----~~~w~~L~~k~~~~~~G~l~L~i~l~ 423 (790)
++||++.+++..+..+.. ...|++|.+. ..|+|++++.+.
T Consensus 464 d~lG~~~~~l~~l~~~~~~~~~~~~~~~l~~~----~~G~i~l~~~l~ 507 (510)
T 3jzy_A 464 DFLGRTEIPVAKIRTEQESKGPMTRRLLLHEV----PTGEVWVRFDLQ 507 (510)
T ss_dssp CEEEEEEEEHHHHHHHHHHHCSCCEEEECBSS----SSCEEEEEEEEE
T ss_pred CceEEEEEEHHHhccccCCCCceeeeecCCCC----CCceEEEEEEEE
Confidence 999999999999865443 6789999873 579999998764
No 36
>3nsj_A Perforin-1; pore forming protein, immune system; HET: NAG; 2.75A {Mus musculus}
Probab=99.57 E-value=1.4e-14 Score=166.39 Aligned_cols=112 Identities=19% Similarity=0.244 Sum_probs=98.7
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeecccCCCCCeEeeEEEEEeec-CCCCeEEEEEEeeCCCCCCC
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQLQTCDPQWHDILEFDAME-EPPSVLDVEVFDFDGPFDQA 379 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~~tlnP~WnE~f~f~v~~-~~~~~L~v~V~D~d~~~~~d 379 (790)
.+.|+|+|++|+||+. |..|.+||||++++++++++|+++++++||.|||+|.|.+.. +....|.|+|||+|. +++|
T Consensus 393 ~~~L~V~V~~A~~L~~-D~~g~sDPYV~v~l~~~~~kTkvik~tlNP~Wne~f~f~~~~~~~~~~L~~~V~D~D~-~~~d 470 (540)
T 3nsj_A 393 LAHLVVSNFRAEHLWG-DYTTATDAYLKVFFGGQEFRTGVVWNNNNPRWTDKMDFENVLLSTGGPLRVQVWDADY-GWDD 470 (540)
T ss_dssp EEEEEEEEEEEESCCC-SSCSCCCEEEEEEETTEEEECCCBCSCSSCBCCCCEEEEEEETTTCCCEEEEEEECCS-SSCC
T ss_pred ccEEEEEEEEccCCCc-ccCCCcCeEEEEEECCEeeeeeeecCCCCCCCCeEEEEEEecCCCCCEEEEEEEECCC-CCCC
Confidence 5699999999999998 999999999999999999999999999999999999998643 467899999999999 7899
Q ss_pred CccccEEEeceecCCCCceeEEEEccccccCcCCceeEEEEEEecC
Q 003874 380 TSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQSKVHLRIFLENN 425 (790)
Q Consensus 380 d~LG~~~i~L~~l~~~~~~~~w~~L~~k~~~~~~G~l~L~i~l~~~ 425 (790)
|+||++.++|.. +..+.|++|. .|.|++++.+.-.
T Consensus 471 D~LG~~~~~L~~----g~~~~~~~l~-------~G~l~~~~~~~c~ 505 (540)
T 3nsj_A 471 DLLGSCDRSPHS----GFHEVTCELN-------HGRVKFSYHAKCL 505 (540)
T ss_dssp EEEEEEEECCCS----EEEEEEEECS-------SSEEEEEEEEEEC
T ss_pred CEEEEEEEEeeC----CcEEEEEEcC-------CeEEEEEEEEEEC
Confidence 999999999873 4567899875 4889888876543
No 37
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.56 E-value=1.5e-14 Score=155.09 Aligned_cols=126 Identities=18% Similarity=0.353 Sum_probs=102.7
Q ss_pred CCceEEEEEEEEeecCCCCCCCCCCCcEEEEEE---CCeEeeeecccCCCCCeEeeEEEEEeecCC--CCeEEEEEEeeC
Q 003874 299 GDGWVLTVALVEGVNLASSEMTGLSDPYVVFTC---NGKTRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVFDFD 373 (790)
Q Consensus 299 ~~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l---~~~~~kT~v~~~tlnP~WnE~f~f~v~~~~--~~~L~v~V~D~d 373 (790)
...+.|.|+|++|+||+++|..|.+||||++++ +.++++|+++++++||.|||+|.|.+..+. ...|.|+|||+|
T Consensus 17 ~~~~~L~v~v~~a~~L~~~d~~g~~dPyv~v~l~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~~~V~d~d 96 (296)
T 1dqv_A 17 YGSDQLVVRILQALDLPAKDSNGFSDPYVKIYLLPDRKKKFQTKVHRKTLNPIFNETFQFSVPLAELAQRKLHFSVYDFD 96 (296)
T ss_dssp SSSCEEEEEEEEEECCCCCSTTSCCCEEEEEECTTSTTSCEECCCCCSCSSCEEEEEEEEECCGGGGSSCCCEEEEEECC
T ss_pred CCCCEEEEEEEEeECCCCcCCCCCcCeEEEEEEEcCCCeeEeCCccCCCCCCcEeeEEEEEecHHHhcCCEEEEEEEEcC
Confidence 456799999999999999999999999999999 567889999999999999999999985432 458999999999
Q ss_pred CCCCCCCccccEEEe-ceecC-CCCceeEEEEccccc-cCcCCceeEEEEEEecC
Q 003874 374 GPFDQATSLGHAEIN-FLKHT-STELADMWVSLEGKL-AQSAQSKVHLRIFLENN 425 (790)
Q Consensus 374 ~~~~~dd~LG~~~i~-L~~l~-~~~~~~~w~~L~~k~-~~~~~G~l~L~i~l~~~ 425 (790)
. +++|++||++.++ +..+. .......|++|.... .....|.|++.+.+...
T Consensus 97 ~-~~~~~~iG~~~i~~l~~~~~~~~~~~~w~~L~~~~~~~~~~G~i~vsl~y~~~ 150 (296)
T 1dqv_A 97 R-FSRHDLIGQVVLDNLLELAEQPPDRPLWRDILEGGSEKADLGELNFSLCYLPT 150 (296)
T ss_dssp S-SSCCCEEEEEECCCTTGGGSSCSSCCCCEECBCCSSCCSCCCEEEEEEEEETT
T ss_pred C-CCCCceEEEEEeccccccccCCccceeeeccccccccccccceEEEEEEeccc
Confidence 8 8999999999996 43332 244557899997643 22346889888866543
No 38
>3l9b_A Otoferlin; C2-domain, beta-sheets, cell membrane, synaptic V hearing, membrane, synapse, transmembrane, membrane protein; 1.95A {Rattus norvegicus}
Probab=99.48 E-value=1.3e-13 Score=128.91 Aligned_cols=118 Identities=14% Similarity=0.185 Sum_probs=103.3
Q ss_pred EEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeeccc-CCCCCeEeeEEEEEeecC--CCCeEEEEEEeeCCCCCCC
Q 003874 303 VLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQL-QTCDPQWHDILEFDAMEE--PPSVLDVEVFDFDGPFDQA 379 (790)
Q Consensus 303 ~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~-~tlnP~WnE~f~f~v~~~--~~~~L~v~V~D~d~~~~~d 379 (790)
-|+|.|.+|.+|+ |++|||+++.+.+.+++|++++ ++.||.|||.|+|++..+ ....|.|.|+|+++ ++++
T Consensus 22 sL~V~l~~a~~Lp-----g~~Dp~akv~FRg~k~kTkvi~~~~~npvfnE~F~wpl~~~ld~~e~L~v~V~d~~~-v~~n 95 (144)
T 3l9b_A 22 ALIVHLKTVSELR-----GRADRIAKVTFRGQSFYSRVLENCEDVADFDETFRWPVASSIDRNEVLEIQIFNYSK-VFSN 95 (144)
T ss_dssp EEEEEEEEEESCC-----SCEEEEEEEEETTEEEECCCEEEECSCEEEEEEEEEEESSCCCTTCEEEEEEEEECT-TSCC
T ss_pred EEEEEEEEecCCC-----CCCCCeEEEEEeccceeeEEeccCCCCceEcceEEecCCCCCCCCCEEEEEEEECcc-ccCC
Confidence 6999999999998 5799999999999999999998 699999999999997553 45799999999999 8999
Q ss_pred CccccEEEeceecCCCCceeEEEEccccccCcCCceeEEEEEEecCC
Q 003874 380 TSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQSKVHLRIFLENNN 426 (790)
Q Consensus 380 d~LG~~~i~L~~l~~~~~~~~w~~L~~k~~~~~~G~l~L~i~l~~~~ 426 (790)
.+||++.++|.++..++....+-+|.+.+.+...+.|.+.+.+.+..
T Consensus 96 rlIG~~~i~Lq~lv~~~~l~l~~~LvD~n~~~~~a~I~l~l~Y~pp~ 142 (144)
T 3l9b_A 96 KLIGTFRMVLQKVVEENRVEVSDTLIDDNNAIIKTSLSMEVRYQAAD 142 (144)
T ss_dssp EEEEEEEEESHHHHHHSEEEEEEEEECTTSCEEEEEEEEEEEEEETT
T ss_pred CEEEEEEEEhHHhccCCeEEEeecccCCCCCccccEEEEEEEecCCC
Confidence 99999999999998777777888888777676678888888776544
No 39
>2cjt_A UNC-13 homolog A, MUNC13-1; phorbol-ester binding, neurotransmitter release, RIM, MUNC13 domains, exocytosis, metal-binding; 1.44A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.48 E-value=2.6e-13 Score=127.61 Aligned_cols=97 Identities=18% Similarity=0.200 Sum_probs=76.6
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeeccc-CCCCCeEeeEEEEEeecCCCCeEEEEEEeeCCCCCCC
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQL-QTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFDQA 379 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~-~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d~~~~~d 379 (790)
.+.|+|+|++|++|+. .|.+||||+++ .+..+|++++ +++||.|||+|.|.+. +....|.|+|||+|. ++|
T Consensus 4 ~~~L~V~V~~A~~l~~---~g~~DPYv~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~-~~~~~L~~~V~D~d~--~~d 75 (131)
T 2cjt_A 4 MSLLCVGVKKAKFDGA---QEKFNTYVTLK--VQNVKSTTIAVRGSQPSWEQDFMFEIN-RLDLGLTVEVWNKGL--IWD 75 (131)
T ss_dssp CEEEEEEEEEEECSSC---GGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEEEC-CCSSEEEEEEEECCS--SCE
T ss_pred ceEEEEEEEEeECCCC---CCCcCeEEEEE--ecCEEEeEecCCCCCceECCEEEEEEe-CCCCeEEEEEEECCC--CCC
Confidence 4789999999999853 67899999999 3344565554 7999999999999984 456689999999993 789
Q ss_pred CccccEEEeceecCCCCc--eeEEEEcc
Q 003874 380 TSLGHAEINFLKHTSTEL--ADMWVSLE 405 (790)
Q Consensus 380 d~LG~~~i~L~~l~~~~~--~~~w~~L~ 405 (790)
++||++.|+|..+..... ...|.++.
T Consensus 76 d~iG~~~i~l~~l~~~~~~~~~~~~~~~ 103 (131)
T 2cjt_A 76 TMVGTVWIPLRTIRQSNEEGPGEWLTLD 103 (131)
T ss_dssp EEEEEEEEEGGGSCBCSSCCCCEEEECB
T ss_pred CeEEEEEEEHHHhhhcCCCCccccEEcc
Confidence 999999999999854331 12466554
No 40
>2cjs_A UNC-13 homolog A, MUNC13-1; neurotransmitter transport, zinc finger, synapto phorbol-ester binding; 1.78A {Rattus norvegicus} SCOP: b.7.1.1
Probab=99.47 E-value=1.7e-13 Score=134.23 Aligned_cols=120 Identities=14% Similarity=0.058 Sum_probs=87.9
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeEeeeeccc-CCCCCeEeeEEEEEeecCCCCeEEEEEEeeCCCCCC
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKTRTSSVQL-QTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGPFDQ 378 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~~kT~v~~-~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d~~~~~ 378 (790)
..+.|+|+|++|++|+ ..|.+||||+++ .+..+|++++ +++||.|||+|.|.+. +....|.|+|||+|. ++
T Consensus 12 ~~~~L~V~V~~A~~l~---~~g~~DPYV~v~--~~~~kt~~~~~~t~nP~WnE~f~f~v~-~~~~~L~~~V~D~d~--~~ 83 (167)
T 2cjs_A 12 ILSLLCVGVKKAKFDG---AQEKFNTYVTLK--VQNVESTTIAVRGSQPSWEQDFMFEIN-RLDLGLTVEVWNKGL--IW 83 (167)
T ss_dssp CCCEEEEEEEEEECSS---CGGGCEEEEEEE--ETTEEEECCCEESSSCEEEEEEEEECC-CTTSEEEEEEEECCS--SC
T ss_pred ceEEEEEEEEEEECCC---CCCCCCeEEEEE--ecceEEEEecCCCCCCCCCCEEEEEee-CCCCEEEEEEEECCC--CC
Confidence 3579999999999885 367899999999 3345677765 6999999999999984 556789999999993 78
Q ss_pred CCccccEEEeceecCCCC------ceeEEEEcccccc------CcCCceeEEEEEEecCCC
Q 003874 379 ATSLGHAEINFLKHTSTE------LADMWVSLEGKLA------QSAQSKVHLRIFLENNNG 427 (790)
Q Consensus 379 dd~LG~~~i~L~~l~~~~------~~~~w~~L~~k~~------~~~~G~l~L~i~l~~~~~ 427 (790)
|++||++.|+|..+.... ....|+.+..+.+ ....+++++.+.+....+
T Consensus 84 dd~iG~~~i~L~~l~~~~~~g~~~~~~~~~~~~~~~g~~~g~~~p~~~~lll~~~~e~~~~ 144 (167)
T 2cjs_A 84 DTMVGTVWIPLRTIRQSNEEGPGEWLTLDSQAIMADSEICGTKDPTFHRILLDAHFELPLD 144 (167)
T ss_dssp CEEEEEEEEEGGGSCBCSSCCCCEEEEEEEEEEEETTEEEEEEEEEEEEEEEEEEEECCCC
T ss_pred CceEEEEEEEHHHhcccCcCCcccceeeeeeeEcCCCCCCceEccccceEEEEEEeecCCC
Confidence 999999999999985433 1223444332111 123466778877655443
No 41
>2r83_A Synaptotagmin-1; C2A-C2B, exocytosis, calcium, cell junction, cytoplasmic vesicle, glycoprotein, lipoprotein, membrane, metal-binding palmitate; 2.70A {Homo sapiens} SCOP: b.7.1.2
Probab=99.47 E-value=2.3e-13 Score=144.56 Aligned_cols=107 Identities=24% Similarity=0.446 Sum_probs=91.5
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eEeeeecccCCCCCeEeeEEEEEeecCC--CCeEEEEEEee
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCN--G---KTRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVFDF 372 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~--~---~~~kT~v~~~tlnP~WnE~f~f~v~~~~--~~~L~v~V~D~ 372 (790)
..+.|.|.|++|+||+++|..|.+||||++++. + .+++|+++++++||.|||+|.|.+..+. ...|.|+|||+
T Consensus 148 ~~~~l~v~v~~a~~L~~~d~~~~~dpyv~v~~~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~l~i~V~d~ 227 (284)
T 2r83_A 148 TAGKLTVVILEAKNLKKMDVGGLSDPYVKIHLMQNGKRLKKKKTTIKKNTLNPYYNESFSFEVPFEQIQKVQVVVTVLDY 227 (284)
T ss_dssp TTTEEEEEEEEEESCCCCSTTSCCCEEEEEEEEETTEEEEEEECCCCCSCSSCEEEEEEEEECCTTTGGGEEEEEEEEEC
T ss_pred cCCceEEEEEEeECCCCcCCCCCcCeEEEEEEEeCCcEeeeeccceecCCCCCEEceeEEEeCCHHHhCceEEEEEEEeC
Confidence 457899999999999999999999999999983 2 4679999999999999999999985443 34799999999
Q ss_pred CCCCCCCCccccEEEeceec------------CCCCceeEEEEcccc
Q 003874 373 DGPFDQATSLGHAEINFLKH------------TSTELADMWVSLEGK 407 (790)
Q Consensus 373 d~~~~~dd~LG~~~i~L~~l------------~~~~~~~~w~~L~~k 407 (790)
|. ++++++||++.+++..+ ..+.....|++|.+.
T Consensus 228 d~-~~~~~~iG~~~i~l~~~~~~~~~w~~~~~~~~~~~~~W~~L~~~ 273 (284)
T 2r83_A 228 DK-IGKNDAIGKVFVGYNSTGAELRHWSDMLANPRRPIAQWHTLQVE 273 (284)
T ss_dssp CS-SSCCCEEEEEEEETTCCHHHHHHHHHHHHSTTSCEEEEEECBCH
T ss_pred CC-CCCCcEEEEEEECCCCCCcHHHHHHHHHHCCCCchheeeecCCc
Confidence 99 89999999999999763 234566789999864
No 42
>1djx_A PLC-D1, phosphoinositide-specific phospholipase C, isozyme delta1; phosphoric diester hydrolase, hydrolase, lipid degradation, transducer; HET: I3P; 2.30A {Rattus norvegicus} SCOP: a.39.1.7 b.7.1.1 c.1.18.1 PDB: 1djg_A 1dji_A 1djh_A* 1djw_A* 1djy_A* 1djz_A* 2isd_A 1qas_A 1qat_A
Probab=99.45 E-value=3.3e-13 Score=158.18 Aligned_cols=120 Identities=19% Similarity=0.329 Sum_probs=101.2
Q ss_pred CceEEEEEEEEeecCCCCCC--CCCCCcEEEEEECC-----eEeeeecccCC-CCCeEeeEEEEEeecCCCCeEEEEEEe
Q 003874 300 DGWVLTVALVEGVNLASSEM--TGLSDPYVVFTCNG-----KTRTSSVQLQT-CDPQWHDILEFDAMEEPPSVLDVEVFD 371 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~--~g~sDPyV~v~l~~-----~~~kT~v~~~t-lnP~WnE~f~f~v~~~~~~~L~v~V~D 371 (790)
..+.|+|+|++|++|+..+. .|.+||||++.+.+ .++||++++++ +||+|||+|.|.+..+....|.|+|||
T Consensus 495 ~~~~L~V~Vi~A~~L~~~d~~~~~~~DPYV~V~l~g~~~d~~~~kTkvi~~ng~NP~WnE~f~F~v~~~el~~L~~~V~D 574 (624)
T 1djx_A 495 RPERLRVRIISGQQLPKVNKNKNSIVDPKVIVEIHGVGRDTGSRQTAVITNNGFNPRWDMEFEFEVTVPDLALVRFMVED 574 (624)
T ss_dssp CCEEEEEEEEEEESCCCCSSCSSSCCCEEEEEEEESSGGGCEEEECCCCTTCSSSCEEEEEEEEEESCGGGCEEEEEEEE
T ss_pred cceEEEEEEEEcCCCCcccccccCCCCcEEEEEEecCCCCcceeecccccCCCCCCccCceEEEEEecCCCCEEEEEEEE
Confidence 56899999999999999884 78899999999943 68899999987 999999999999865555789999999
Q ss_pred eCCCCCCCCccccEEEeceecCCCCceeEEEEccccccCc-CCceeEEEEEEe
Q 003874 372 FDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQS-AQSKVHLRIFLE 423 (790)
Q Consensus 372 ~d~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~~~~-~~G~l~L~i~l~ 423 (790)
+|. ++++++||++.++|..+..+. .|++|.+..+.. ..++|.+++.+.
T Consensus 575 ~D~-~~~dd~iG~~~ipl~~L~~G~---r~v~L~d~~g~~~~~~~L~v~i~~~ 623 (624)
T 1djx_A 575 YDS-SSKNDFIGQSTIPWNSLKQGY---RHVHLLSKNGDQHPSATLFVKISIQ 623 (624)
T ss_dssp CCS-SSCCEEEEEEEEEGGGBCCEE---EEEEEECTTSCEEEEEEEEEEEEEE
T ss_pred cCC-CCCCceeEEEEEEHHHcCCCc---EEEeCCCCCcCCCCceEEEEEEEEE
Confidence 998 889999999999999987643 589997765443 357788877653
No 43
>1cjy_A CPLA2, protein (cytosolic phospholipase A2); lipid-binding, hydrolase; HET: MES; 2.50A {Homo sapiens} SCOP: b.7.1.1 c.19.1.2 PDB: 1bci_A
Probab=99.43 E-value=1.3e-13 Score=163.00 Aligned_cols=106 Identities=17% Similarity=0.276 Sum_probs=97.2
Q ss_pred CceEEEEEEEEeecCCC---CCCCCCCCcEEEEEEC---CeEeeeecccCCCCCeEeeEEEEEeecCCCCeEEEEEEeeC
Q 003874 300 DGWVLTVALVEGVNLAS---SEMTGLSDPYVVFTCN---GKTRTSSVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFD 373 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~---~d~~g~sDPyV~v~l~---~~~~kT~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d 373 (790)
..+.|+|+|++|++|++ +|..|.+||||+++++ ..+++|+++++++||+|||+|.|.+.......|.|+|||+|
T Consensus 16 ~~g~L~V~Vi~A~nL~~~~~~D~~g~sDPYV~V~l~~~~~~k~kTkvik~tlNPvWNEtF~F~v~~~~~~~L~~~V~D~D 95 (749)
T 1cjy_A 16 YSHKFTVVVLRATKVTKGAFGDMLDTPDPYVELFISTTPDSRKRTRHFNNDINPVWNETFEFILDPNQENVLEITLMDAN 95 (749)
T ss_dssp CCEEEEEEEEEEECCCSCHHHHHHCCCCEEEEEECTTSTTCCEECCCCTTCSSCEEEEEEEEEECTTSCCBCEEEEEECC
T ss_pred CccEEEEEEEEEECCCCccccCCCCCcCeEEEEEEecCCCCeEecceEcCCCCCeeeeEEEEEecCCCCCEEEEEEEECC
Confidence 56899999999999998 8888999999999997 46889999999999999999999996666789999999999
Q ss_pred CCCCCCCccccEEEeceecCCCCceeEEEEcccc
Q 003874 374 GPFDQATSLGHAEINFLKHTSTELADMWVSLEGK 407 (790)
Q Consensus 374 ~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k 407 (790)
. ++ |++||++.++|..+..+...+.|++|.+.
T Consensus 96 ~-~~-ddfIG~v~I~L~~L~~g~~~~~w~~L~~~ 127 (749)
T 1cjy_A 96 Y-VM-DETLGTATFTVSSMKVGEKKEVPFIFNQV 127 (749)
T ss_dssp S-SS-CEEEEEECCBSTTSCTTCCCCEEEEETTT
T ss_pred C-CC-CceeEEEEEEHHHcCCCCceEEEEecCCC
Confidence 9 78 99999999999999888888999999763
No 44
>1dqv_A Synaptotagmin III; beta sandwich, calcium ION, C2 domain, endocytosis/exocytosis complex; 3.20A {Rattus rattus} SCOP: b.7.1.2 b.7.1.2 PDB: 3hn8_A
Probab=99.33 E-value=2e-13 Score=146.28 Aligned_cols=107 Identities=27% Similarity=0.478 Sum_probs=89.2
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEEC--C---eEeeeecccCCCCCeEeeEEEEEeecCC--CCeEEEEEEee
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCN--G---KTRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVFDF 372 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~--~---~~~kT~v~~~tlnP~WnE~f~f~v~~~~--~~~L~v~V~D~ 372 (790)
..+.|+|.|++|+||+++|..|.+||||++++. + .+++|+++++++||.|||+|.|.+..+. ...|.|+|||+
T Consensus 150 ~~~~l~v~v~~a~~L~~~d~~g~~Dpyv~v~l~~~~~~~~~~kT~v~~~t~nP~wne~f~f~v~~~~l~~~~L~i~V~d~ 229 (296)
T 1dqv_A 150 TAGLLTVTIIKASNLKAMDLTGFSDPYVKASLISEGRRLKKRKTSIKKNTLNPTYNEALVFDVAPESVENVGLSIAVVDY 229 (296)
T ss_dssp TTTEEEEEEEEEESCCCCSSSSCCCEEEEECCCTTCCTTSCEECCCCCSCSSCEEEECCCCCCCSGGGGSCCCCCEEEEC
T ss_pred ccceeEEEEEEeecCCccCCCCCCCcEEEEEEEeCCcCccceecceecCCCCCeECceEEEEcCHHHccCcEEEEEEEeC
Confidence 467999999999999999999999999999985 2 5789999999999999999999875432 35799999999
Q ss_pred CCCCCCCCccccEEEeceecC-------------CCCceeEEEEcccc
Q 003874 373 DGPFDQATSLGHAEINFLKHT-------------STELADMWVSLEGK 407 (790)
Q Consensus 373 d~~~~~dd~LG~~~i~L~~l~-------------~~~~~~~w~~L~~k 407 (790)
|. ++++++||++.|++..+. .+.....|++|.+.
T Consensus 230 d~-~~~~~~iG~~~i~l~~~~~~~~~~W~~~~~~~~~~~~~w~~L~~~ 276 (296)
T 1dqv_A 230 DC-IGHNEVIGVCRVGPEAADPHGREHWAEMLANPRKPVEHWHQLVEE 276 (296)
T ss_dssp CS-SSCCEEEEECCCSSCTTCHHHHHHHHTSSSSSSSCSCSCCCCBBC
T ss_pred CC-CCCCceEEEEEECCccCCchhHHHHHHHHhCCCCceeEeeeccCc
Confidence 99 899999999999998752 23344566666553
No 45
>3bxj_A RAS GTPase-activating protein syngap; GTPase activation, membrane, phosphoprotein, SH3-binding, signaling protein; 3.00A {Rattus norvegicus}
Probab=99.28 E-value=2.4e-13 Score=155.32 Aligned_cols=99 Identities=14% Similarity=0.267 Sum_probs=14.3
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCe-EeeeecccCC---CCCeEeeEEEEEeecCCCCeEEEEEEee-C--
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGK-TRTSSVQLQT---CDPQWHDILEFDAMEEPPSVLDVEVFDF-D-- 373 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~-~~kT~v~~~t---lnP~WnE~f~f~v~~~~~~~L~v~V~D~-d-- 373 (790)
.+.|+|+|++|++|+++| ||||++++++. ..||+++++| +||.|||+|.|.+. +....|.|+|||. |
T Consensus 10 ~~~L~V~VieAk~L~~~d-----dpYv~v~l~~~~~~kT~v~~kt~~glnP~WnE~F~f~~~-~~~~~L~v~V~d~~d~~ 83 (483)
T 3bxj_A 10 DNVLKLWIIEARELPPKK-----RYYCELCLDDMLYARTTSKPRSASGDTVFWGEHFEFNNL-PAVRALRLHLYRDSDKK 83 (483)
T ss_dssp EECC--------------------------------------------------CCEECC--------------------
T ss_pred ccEEEEEEEEcCCcCCCC-----CCeEEEEECCeEEeeeeEEeCCCCCCCCccccEEEEecC-CCccEEEEEEEecCCcc
Confidence 468999999999999887 99999999865 5699999999 99999999999863 3358899999994 4
Q ss_pred -CCCCCCCccccEEEeceecCCCCceeEEEEccc
Q 003874 374 -GPFDQATSLGHAEINFLKHTSTELADMWVSLEG 406 (790)
Q Consensus 374 -~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~ 406 (790)
. .++|++||++.|++..+..+...+.|++|.+
T Consensus 84 ~~-~~~d~~lG~v~i~l~~l~~~~~~~~W~~L~~ 116 (483)
T 3bxj_A 84 RK-KDKAGYVGLVTVPVATLAGRHFTEQWYPVTL 116 (483)
T ss_dssp ------------------------CCEECC----
T ss_pred cc-CCCCceEEEEEEEHHHhcCCCCCCeEEECCC
Confidence 3 4789999999999999988888899999954
No 46
>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A
Probab=99.17 E-value=3.8e-11 Score=142.89 Aligned_cols=106 Identities=25% Similarity=0.443 Sum_probs=93.4
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE-----CCeEeeeecccCCCCCeEeeEEEEEeecC-CCCeEEEEEEeeC
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTC-----NGKTRTSSVQLQTCDPQWHDILEFDAMEE-PPSVLDVEVFDFD 373 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l-----~~~~~kT~v~~~tlnP~WnE~f~f~v~~~-~~~~L~v~V~D~d 373 (790)
..+.|.|.+++|++|+++|..|.+||||++.+ ...+++|+++++++||.|||+|.|.+... ....|.|+|||+|
T Consensus 170 ~~~~L~V~v~~a~~L~~~d~~g~sDPyvkv~l~p~~~~~~k~kT~v~~~tlnP~wne~f~f~~~~~~~~~~L~v~v~d~d 249 (674)
T 3pfq_A 170 DREVLIVVVRDAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTKTIKSSLNPEWNETFRFQLKESDKDRRLSVEIWDWD 249 (674)
T ss_dssp CSSEEEEEEEEEESCCCCSTTSSCCEEEEEEEESCSSCCSCEECCCCSSCSSCEEEEEEEEECCSTTTTCEEEEEEEECC
T ss_pred ccceeeeeeecccccCCCCcccccCcccccccccCccccccccccccccccCCCccceeeeecccCCccceeeeEEeecc
Confidence 46789999999999999999999999999998 34678999999999999999999997543 3457999999999
Q ss_pred CCCCCCCccccEEEeceecCCCCceeEEEEcccc
Q 003874 374 GPFDQATSLGHAEINFLKHTSTELADMWVSLEGK 407 (790)
Q Consensus 374 ~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k 407 (790)
. +++|++||++.+++.++.... .+.|+.|.+.
T Consensus 250 ~-~~~dd~iG~~~i~l~~l~~~~-~~~w~~Lls~ 281 (674)
T 3pfq_A 250 L-TSRNDFMGSLSFGISELQKAG-VDGWFKLLSQ 281 (674)
T ss_dssp S-SSCCEECCBCCCBTTHHHHCC-EEEEEECBCT
T ss_pred c-ccccccccccccchhhhccCC-cccceeeccc
Confidence 9 899999999999999986654 4899999763
No 47
>3qr0_A Phospholipase C-beta (PLC-beta); PH domain, EF hand, C2 domain, TIM barrel domain, hydrolase, calcium binding, phospholipid binding; 2.00A {Sepia officinalis} PDB: 3qr1_A
Probab=98.98 E-value=1.2e-09 Score=130.69 Aligned_cols=112 Identities=14% Similarity=0.195 Sum_probs=90.2
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC-------eEeeeecccC-CCCCeEeeE-EEEE-eecCCCCeEEEEEE
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG-------KTRTSSVQLQ-TCDPQWHDI-LEFD-AMEEPPSVLDVEVF 370 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~-------~~~kT~v~~~-tlnP~WnE~-f~f~-v~~~~~~~L~v~V~ 370 (790)
.+.|+|+|++|++|+.. .+||||++.+.+ ++++|+++++ ++||+|||+ |.|. +..+....|.|+||
T Consensus 649 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~d~~~~k~kTkvv~~nglNPvWNE~~F~F~~v~~pela~Lrf~V~ 724 (816)
T 3qr0_A 649 AGTIEIKIISAQFLSDK----QISSYVEVEMYGLPTDTVRKKFKTKIIENNGMDPYYDEKVFVFKKVVLPDLAVVRIIVS 724 (816)
T ss_dssp CEEEEEEEEEEECCCSS----CCCEEEEEEEESSGGGCEEEEEECCCBCSCSSCCBCCCCCEEEEEESCGGGCEEEEEEE
T ss_pred ceEEEEEEEEcccCCCC----CCCCeEEEEEeCCCcccccceeeeEEecCCCCCCeEcCceeEEccccCCCccEEEEEEE
Confidence 47899999999999864 589999999853 6789999875 699999998 9998 75555578999999
Q ss_pred eeCCCCCCCCccccEEEeceecCCCCceeEEEEccccccCcCC-ceeEEEEEEec
Q 003874 371 DFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQSAQ-SKVHLRIFLEN 424 (790)
Q Consensus 371 D~d~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~~~~~~-G~l~L~i~l~~ 424 (790)
|++ +++||++.+||..+..|. .+++|.++.+.... ++|.+.+.+..
T Consensus 725 D~d-----ddfiG~~~ipL~~L~~Gy---R~vpL~~~~g~~~~~atLfv~i~~~~ 771 (816)
T 3qr0_A 725 EEN-----GKFIGHRVMPLDGIKPGY---RHVPLRNESNRPLGLASVFAHIVAKD 771 (816)
T ss_dssp ETT-----SCEEEEEEEESTTCCCEE---EEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred ecC-----CCeeeEEEEEHHHcCCcc---eEEEEeCCCCCCCCceEEEEEEEEEe
Confidence 975 589999999999987754 36788776554433 78888886653
No 48
>3ohm_B 1-phosphatidylinositol-4,5-bisphosphate phosphodi beta-3; PH domain, EF hand, TIM barrel, C2 domain, GTPase, lipase, C binding, GTP binding; HET: GDP; 2.70A {Homo sapiens}
Probab=98.96 E-value=8.8e-10 Score=132.38 Aligned_cols=112 Identities=16% Similarity=0.241 Sum_probs=89.6
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeeeecccC-CCCCeEee-EEEEE-eecCCCCeEEEEEEe
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG------KTRTSSVQLQ-TCDPQWHD-ILEFD-AMEEPPSVLDVEVFD 371 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~------~~~kT~v~~~-tlnP~WnE-~f~f~-v~~~~~~~L~v~V~D 371 (790)
...|+|+|++|++|+.. .+||||+|.+.+ .+++|+++++ ++||+||| +|.|. +..+....|.|+|||
T Consensus 724 ~~~L~V~Visaq~L~~~----~~DPYV~V~l~g~p~D~~~k~kTkvi~~NglNPvWnEe~F~F~~V~~pela~Lrf~V~D 799 (885)
T 3ohm_B 724 ANALRVKVISGQFLSDR----KVGIYVEVDMFGLPVDTRRKYRTRTSQGNSFNPVWDEEPFDFPKVVLPTLASLRIAAFE 799 (885)
T ss_dssp CEEEEEEEEEEESCCSS----CCCEEEEEEEESSTTTCBCCCCCCCCSSCSSSCBCCCCCEEEEEESCGGGCEEEEEEEE
T ss_pred ceEEEEEEEEeccCccc----CCCcEEEEEEeCCCcccccceeeEEeeCCCcCCeeccceeEEeeEEcCCcCEEEEEEEc
Confidence 34899999999999863 589999999853 3579999975 59999999 69998 655556789999999
Q ss_pred eCCCCCCCCccccEEEeceecCCCCceeEEEEccccccCc-CCceeEEEEEEec
Q 003874 372 FDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQS-AQSKVHLRIFLEN 424 (790)
Q Consensus 372 ~d~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~~~~-~~G~l~L~i~l~~ 424 (790)
+| +++||++.+||..+..+.. +++|.+..+.. ..|.|.+.+.+..
T Consensus 800 ~d-----ddfiG~~~lpL~~L~~GyR---~vpL~~~~g~~l~~atLfv~i~~~~ 845 (885)
T 3ohm_B 800 EG-----GKFVGHRILPVSAIRSGYH---YVCLRNEANQPLCLPALLIYTEASD 845 (885)
T ss_dssp TT-----TEEEEEEEEETTTCCCEEE---EEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred CC-----ccEEeeEEEEHHHcCCCce---EEEecCCCCCccCceEEEEEEEEEe
Confidence 76 5899999999999876543 57887655443 4678888887664
No 49
>2zkm_X 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase beta-2; phospholipase C, phosphoinositide phospholipase, PLC-beta-2, calcium, coiled coil; 1.62A {Homo sapiens} SCOP: a.39.1.7 b.7.1.1 b.55.1.1 c.1.18.1 PDB: 2fju_B
Probab=98.94 E-value=1.5e-09 Score=130.35 Aligned_cols=111 Identities=16% Similarity=0.226 Sum_probs=86.7
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEECC------eEeeee-ccc-CCCCCeEee-EEEE-EeecCCCCeEEEEE
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTCNG------KTRTSS-VQL-QTCDPQWHD-ILEF-DAMEEPPSVLDVEV 369 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~------~~~kT~-v~~-~tlnP~WnE-~f~f-~v~~~~~~~L~v~V 369 (790)
..+.|+|+|++|++|+. +.+||||++.+.+ +++||+ +++ +++||+||| +|.| .+..+....|.|+|
T Consensus 676 ~~~~L~V~Visa~~L~~----~~~DPYV~V~l~g~p~d~~~k~kTk~vv~~n~~NPvWnEe~f~F~~v~~~el~~Lr~~V 751 (799)
T 2zkm_X 676 VATTLSITVISGQFLSE----RSVRTYVEVELFGLPGDPKRRYRTKLSPSTNSINPVWKEEPFVFEKILMPELASLRVAV 751 (799)
T ss_dssp TCEEEEEEEEEEESCCS----SCCCEEEEEEEECCTTSCCCCEECCCCSSSCCSSCBCCCCCEEEEEESSGGGCEEEEEE
T ss_pred eeeeEEEEEEeccccCc----cCCCcEEEEEEEecCCCcccceeecccccCCCCCCeeecceEEEEEEccCCccEEEEEE
Confidence 36799999999999985 4689999999832 367999 776 569999999 6999 77555566899999
Q ss_pred EeeCCCCCCCCccccEEEeceecCCCCceeEEEEccccccCc-CCceeEEEEEE
Q 003874 370 FDFDGPFDQATSLGHAEINFLKHTSTELADMWVSLEGKLAQS-AQSKVHLRIFL 422 (790)
Q Consensus 370 ~D~d~~~~~dd~LG~~~i~L~~l~~~~~~~~w~~L~~k~~~~-~~G~l~L~i~l 422 (790)
||+| +++||++.+||..+..+ -.|++|.+..+.. ..+.|.+++.+
T Consensus 752 ~D~d-----~d~iG~~~ipl~~L~~G---~r~v~L~~~~g~~~~~~~Lfv~i~~ 797 (799)
T 2zkm_X 752 MEEG-----NKFLGHRIIPINALNSG---YHHLCLHSESNMPLTMPALFIFLEM 797 (799)
T ss_dssp EETT-----TEEEEEEEEEGGGBCCE---EEEEEEECTTCCEEEEEEEEEEEEE
T ss_pred EEeC-----CCccceEeeehhhcCCC---cEEEeccCCCCCCCCceEEEEEEEE
Confidence 9976 58999999999998764 3478886644332 24667777655
No 50
>1yrk_A NPKC-delta, protein kinase C, delta type; C2 domain, protein binding; HET: PTR; 1.70A {Homo sapiens} PDB: 1bdy_A
Probab=98.74 E-value=1.1e-07 Score=86.39 Aligned_cols=109 Identities=12% Similarity=0.194 Sum_probs=82.8
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEECCeE----eee-ecccCCCCCeEeeEEEEEeecCCCCeEEEEEEeeCCC
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTCNGKT----RTS-SVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFDGP 375 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l~~~~----~kT-~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d~~ 375 (790)
...|+|.+.++.--+-+......||||.+.+.... .+| ...++|..|.|||.|.-.+ .....|.|.|++...
T Consensus 5 ~~flRi~~~~~~~~~~~~~~~~lDPy~aV~vdE~~~~e~g~t~~~K~kT~~P~Wne~Fd~~V--~~Gr~l~i~Vfh~a~- 81 (126)
T 1yrk_A 5 APFLRIAFNSYELGSLQAEDEANQPFCAVKMKEALSTERGKTLVQKKPTMYPEWKSTFDAHI--YEGRVIQIVLMRAAE- 81 (126)
T ss_dssp CCEEEEEEEEEECSSCCCSSSSCCCEEEEEEEEEEEETTEEEEECCSCCBCCCTTCEEEEEC--CTTCEEEEEEEEETT-
T ss_pred CccEEeeeccccccccCCccccCCceEEEEeeeeEEcccceeecccCCCCCcCccceEEeee--eCCEEEEEEEEcCCC-
Confidence 45788888776532222223468999999885432 244 6778899999999999886 457899999995442
Q ss_pred CCCCCccccEEEeceecC-----CCCceeEEEEccccccCcCCceeEEEEEE
Q 003874 376 FDQATSLGHAEINFLKHT-----STELADMWVSLEGKLAQSAQSKVHLRIFL 422 (790)
Q Consensus 376 ~~~dd~LG~~~i~L~~l~-----~~~~~~~w~~L~~k~~~~~~G~l~L~i~l 422 (790)
+|++.|+|++..+. .++..+.|+.|++ .|+|++.+.+
T Consensus 82 ----~fvAn~tV~~edL~~~c~~~~g~~e~WvdLeP------~Gkl~~~i~~ 123 (126)
T 1yrk_A 82 ----EPVSEVTVGVSVLAERCKKNNGKAEFWLDLQP------QAKVLMSVQY 123 (126)
T ss_dssp ----EEEEEEEEEHHHHHHHHHTTTTEEEEEEECBS------SCEEEEEEEE
T ss_pred ----CeeeEEEEEHHHHHhhhccCCCceEEEEeccc------CcEEEEEEEE
Confidence 89999999999985 4677799999986 7999999843
No 51
>2enj_A NPKC-theta, protein kinase C theta type; beta-sandwich, phosphotyrosine binding, TCR, T-cell, diacylglycerol, phorbol ester, structural genomics; NMR {Homo sapiens}
Probab=98.62 E-value=2.1e-07 Score=85.69 Aligned_cols=111 Identities=11% Similarity=0.168 Sum_probs=84.3
Q ss_pred CceEEEEEEEEeecCCCCC-CCCCCCcEEEEEECCe-E---eee-ecccCCCCCeEeeEEEEEeecCCCCeEEEEEEeeC
Q 003874 300 DGWVLTVALVEGVNLASSE-MTGLSDPYVVFTCNGK-T---RTS-SVQLQTCDPQWHDILEFDAMEEPPSVLDVEVFDFD 373 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d-~~g~sDPyV~v~l~~~-~---~kT-~v~~~tlnP~WnE~f~f~v~~~~~~~L~v~V~D~d 373 (790)
..+.|+|.+.++.-.+-+. .....||||.+.+... . .+| ...++|..|.|||.|.-.+ .....|.|.|++ +
T Consensus 8 m~~flRi~l~~~~~~~~~~~~~~~lDPY~aV~VdE~~~te~gqtl~~KkkT~~P~Wne~Fd~~V--~~Gr~l~i~Vfh-~ 84 (138)
T 2enj_A 8 MSPFLRIGLSNFDCGSCQSCQGEAVNPYCAVLVKEYVESENGQMYIQKKPTMYPPWDSTFDAHI--NKGRVMQIIVKG-K 84 (138)
T ss_dssp CCCCEEEEEEEEECCCCCCSCCCCCCCEEEEEEEEEEEETTEEEEEEEEEEECCCSSSEEEECC--CSSCEEEEEEEC-S
T ss_pred cCcceEEEeeccccCCCCCcccccCCceEEEEeeeeeeccCceeecccCCCCCccccceEeeeE--ECCeEEEEEEEc-C
Confidence 3567888887776433222 1235899999988533 2 455 5667799999999998876 457899999994 3
Q ss_pred CCCCCCCccccEEEeceecC-----CCCceeEEEEccccccCcCCceeEEEEEEe
Q 003874 374 GPFDQATSLGHAEINFLKHT-----STELADMWVSLEGKLAQSAQSKVHLRIFLE 423 (790)
Q Consensus 374 ~~~~~dd~LG~~~i~L~~l~-----~~~~~~~w~~L~~k~~~~~~G~l~L~i~l~ 423 (790)
. .+|++.++|++..+. .++..+.|+.|++ .|+|++.+.+.
T Consensus 85 a----~~fVAn~tV~~edL~~~ck~~~g~~e~WvdLeP------~Gkl~v~i~~~ 129 (138)
T 2enj_A 85 N----VDLISETTVELYSLAERCRKNNGKTEIWLELKP------QGRMLMNARYF 129 (138)
T ss_dssp S----CSCCEEEEEESHHHHHHHHHTTTCEEEEEECBS------SCEEEEEEEEC
T ss_pred C----CCeeeEEEEEHHHHHhhhccCCCceEEEEeccc------CcEEEEEEEEE
Confidence 3 289999999999985 5667799999986 79999999653
No 52
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=89.90 E-value=6.7 Score=36.37 Aligned_cols=122 Identities=7% Similarity=-0.002 Sum_probs=68.1
Q ss_pred ccccCCCHHHHhhhccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCCCcE
Q 003874 623 NAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGEGW 702 (790)
Q Consensus 623 ~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~~~~ 702 (790)
+..++.|++.+|+++.|-+.+.+++- ++.++... ..+.....++. .+++.+......-+.........+
T Consensus 8 ~~~i~ap~e~Vw~~l~D~e~~~~w~p--~~~~~~~~-----~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~ 76 (162)
T 2pcs_A 8 SIELKGTVEEVWSKLMDPSILSKCIM--GCKSLELI-----GEDKYKADLQI----GIAAVKGKYDAIIEVTDIKPPYHY 76 (162)
T ss_dssp EEEEESCHHHHHHHHTCHHHHHHHST--TEEEEEEE-----ETTEEEEEEEE----CCGGGCEEEEEEEEEEEEETTTEE
T ss_pred EEEecCCHHHHHHHhcCHHHHHhhCC--CceEeEEe-----CCCeEEEEEEE----EeeeEEEEEEEEEEEEecCCCcEE
Confidence 45689999999999999888777763 44333321 12333333333 244432222222122223344566
Q ss_pred EEEEEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecc--cchhhhhhhhh
Q 003874 703 IVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKS--TKFQQRITQNI 761 (790)
Q Consensus 703 vv~~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Ks--t~~K~~Iek~~ 761 (790)
++.-... .+ +..+.....|.++..+ .++|+|.....+++... ..+..++.+-+
T Consensus 77 ~~~~~~~-~~---~~~~~~~~~~~l~~~~--~~gT~v~~~~~~~~~g~l~~~~~~l~~~~~ 131 (162)
T 2pcs_A 77 KLLVNGE-GG---PGFVNAEGVIDLTPIN--DECTQLTYTYSAEVGGKVAAIGQRMLGGVA 131 (162)
T ss_dssp EEEEEEE-ET---TEEEEEEEEEEEEESS--SSEEEEEEEEEEEEESGGGGGCHHHHHHHH
T ss_pred EEEEEec-CC---CccEEEEEEEEEEecC--CCcEEEEEEEEEEECCCHHHhhHHHHHHHH
Confidence 5553322 11 3344577888888854 46899999999888653 23444444433
No 53
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=85.89 E-value=10 Score=34.68 Aligned_cols=136 Identities=11% Similarity=0.103 Sum_probs=71.8
Q ss_pred eccccCCCHHHHhhhccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCCCc
Q 003874 622 YNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGEG 701 (790)
Q Consensus 622 ~~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~~~ 701 (790)
.+.+++.|++.+|+++.|-+.+.+++- ++..+. . ..+. +.+.....+++........-+.....+...
T Consensus 17 ~~~~i~ap~e~Vw~~l~D~~~~~~w~p--~~~~~~----~--~~~~----~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 84 (157)
T 2ns9_A 17 GSFEVSKTPEEVFEFLTDPKRFSRAFP--GFKSVE----V--EDGS----FTIELRLSLGPLRGDARVRASFEDLEKPSK 84 (157)
T ss_dssp EEEEESSCHHHHHHHHTCHHHHGGGST--TEEEEE----E--ETTE----EEEEEEEESSSSEEEEEEEEEEEEEETTTE
T ss_pred eEEEEcCCHHHHHHHHcCHHHHHhhCC--CceEEE----E--CCCE----EEEEEEEEEcceeEEEEEEEEEEecCCCcE
Confidence 345789999999999988887666654 332222 1 1222 223321234443222222222223334455
Q ss_pred EEEEEEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecc--cchhhhhhhhhHHhHHHHHHHHHHHHHHH
Q 003874 702 WIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKS--TKFQQRITQNITEKFTHRLKEMIELVERE 779 (790)
Q Consensus 702 ~vv~~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Ks--t~~K~~Iek~~~~g~~~~~k~~~~~~~k~ 779 (790)
+++.-... + .+.-|.....|.++..+ ++|+|.....+++... ...+.++.+-+.. .++.+++-+++.
T Consensus 85 i~~~~~~~--~--~~~~~~~~~~~~l~~~~---~gT~v~~~~~~~~~g~l~~~~~~~~~~~~~~----~~~~~~~~lk~~ 153 (157)
T 2ns9_A 85 ATVKGSGR--G--AGSTLDFTLRFAVEPSG---GGSRVSWVFEGNVGGLAASMGGRVLDSLARR----MINDVISGVKRE 153 (157)
T ss_dssp EEEEEEEE--C--SSEEEEEEEEEEEEEET---TEEEEEEEEEEEEEEGGGGSCHHHHHHHHHH----HHHHHHHHHHHH
T ss_pred EEEEEEec--C--CCccEEEEEEEEEEeCC---CcEEEEEEEEEEECcCHHHhhHHHHHHHHHH----HHHHHHHHHHHH
Confidence 55442222 2 12246677889898866 6899999988887653 2344444444333 344444444443
Q ss_pred H
Q 003874 780 I 780 (790)
Q Consensus 780 v 780 (790)
+
T Consensus 154 ~ 154 (157)
T 2ns9_A 154 L 154 (157)
T ss_dssp H
T ss_pred H
Confidence 3
No 54
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=81.71 E-value=24 Score=32.94 Aligned_cols=143 Identities=10% Similarity=0.047 Sum_probs=77.6
Q ss_pred ccccCCCHHHHhhhcc-Cch-HHHHHHHHcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCCC
Q 003874 623 NAELPISVKALMEMFD-GGK-LEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGE 700 (790)
Q Consensus 623 ~~~~p~s~~~lf~lF~-~~~-f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~~ 700 (790)
+.+++++++.+|.+|. |.+ ...+++......++..+.|. .+..|.++|. + | ..+....+++...|..
T Consensus 9 e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eGdgg----~Gsir~~~~~---~-g---~~~~~~kErl~~~D~~ 77 (158)
T 2qim_A 9 EYTSTIAPAKLYKALVTDADIIIPKAVETIQSVEIVEGNGG----PGTIKKLTFI---E-G---GESKYVLHKIEAIDEA 77 (158)
T ss_dssp EEEESSCHHHHHHHHTTTHHHHHHHHCTTEEEEEEEESSSS----TTCEEEEEEE---E-T---TEEEEEEEEEEEEEGG
T ss_pred EEEecCCHHHHHHHHhcCccchhhhHHhhCcEEEEEecCCC----CCeEEEEEEc---C-C---CcceeEEEEEEEEecC
Confidence 3567999999999876 655 66777743333345566662 2679999997 1 2 2222111223222222
Q ss_pred cEEEE-EEEecCCCCCCC-ceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHHH
Q 003874 701 GWIVN-EVMSLHDVPFDD-HFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVER 778 (790)
Q Consensus 701 ~~vv~-~~~t~~dVPygd-~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~k 778 (790)
...+. ++.- -| +..+ +=+....+.+.+.+ .++|. |.+.++|.+..-. ...-......++.+..+++.+++
T Consensus 78 ~~~~~y~iie-G~-~~~~~~~~~~~~~~v~~~~--~~gs~--v~wt~~y~~~~~~--~~~~~~~~~~~~~~~~~~k~ie~ 149 (158)
T 2qim_A 78 NLGYNYSIVG-GV-GLPDTIEKISFETKLVEGA--NGGSI--GKVTIKIETKGDA--QPNEEEGKAAKARGDAFFKAIES 149 (158)
T ss_dssp GTEEEEEEEE-ES-SCCCSEEEEEEEEEEEECS--TTCEE--EEEEEEEEESTTC--CCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEe-cc-CCccceEEEEEEEEEEecC--CCCEE--EEEEEEEEECCCC--CCCHHHHHHHHHHHHHHHHHHHH
Confidence 22222 3332 22 2332 22345567777765 34665 4555666654210 11111222346788889999999
Q ss_pred HHHhcc
Q 003874 779 EILFAT 784 (790)
Q Consensus 779 ~v~~~~ 784 (790)
++..+-
T Consensus 150 yll~~p 155 (158)
T 2qim_A 150 YLSAHP 155 (158)
T ss_dssp HHHHCS
T ss_pred HHHhCc
Confidence 998763
No 55
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=80.94 E-value=5.1 Score=39.93 Aligned_cols=84 Identities=8% Similarity=0.038 Sum_probs=57.4
Q ss_pred eeCCceEEEEEeeeCCCCCCCCee-EE---EEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHHHH
Q 003874 98 KANGQEFAILVTVSTPDVPYGNTF-NV---QLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKES 173 (790)
Q Consensus 98 ~~~~~~~~v~~~~~tpdVP~g~~F-~v---~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~~~ 173 (790)
+.++..+++..++.-|++|-..-| .+ ...|+|.|.+ .++++|++..-..++..|. +=+.++++.+..++-++
T Consensus 140 ~~~~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~---~~~~~t~vt~~~~~Dp~G~-iP~~l~n~~~~~~~~~~ 215 (229)
T 1em2_A 140 RRRDRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSA---SNPRVCTFVWILNTDLKGR-LPRYLIHQSLAATMFEF 215 (229)
T ss_dssp ECSSEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECS---SCTTCEEEEEEECEECCSS-SCHHHHHHHHHHHHHHH
T ss_pred EcCCEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecC---CCCCcEEEEEEEEECCCCC-CCHHHHHHHHHHHHHHH
Confidence 334444445677778888855332 33 3579999532 2357899998899998885 23566788888888888
Q ss_pred HHHHHHHHHhhc
Q 003874 174 FEQFANLLAQNL 185 (790)
Q Consensus 174 ~~~~~~~l~~~~ 185 (790)
++.|.+.+.++-
T Consensus 216 ~~~Lr~~~~~~~ 227 (229)
T 1em2_A 216 AFHLRQRISELG 227 (229)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHhc
Confidence 888777776653
No 56
>1em2_A MLN64 protein; beta barrel, lipid binding protein; HET: TAR; 2.20A {Homo sapiens} SCOP: d.129.3.2
Probab=80.82 E-value=7.5 Score=38.70 Aligned_cols=147 Identities=10% Similarity=0.030 Sum_probs=80.1
Q ss_pred ccccCCCHHHHh-hhccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEeccc--ccCCCceeceEEEEeecCCC
Q 003874 623 NAELPISVKALM-EMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRH--VSIFGGEVTCTQQKSPLASG 699 (790)
Q Consensus 623 ~~~~p~s~~~lf-~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~--i~~~~~~vt~~Q~~~~~~~~ 699 (790)
..+++++++.+| .+|.+.+...++..... +..+ -+....+ . .+.|.+.+| +.+..+.=.....+.... +
T Consensus 71 ~~~v~~~~~~v~~~~~~d~~~r~~Wd~~~~--~~~v--le~~~~~--t-~I~~~~~~p~~~~~~~~RDfv~~r~~~~~-~ 142 (229)
T 1em2_A 71 KTFLPCPAELVYQEVILQPERMVLWNKTVT--ACQI--LQRVEDN--T-LISYDVSAGAAGGVVSPRDFVNVRRIERR-R 142 (229)
T ss_dssp EEEESSCHHHHHHHTTTCHHHHTTTCTTEE--EEEE--EEEETTT--E-EEEEEEECCBTTTTBCCEEEEEEEEEEEC-S
T ss_pred EEEecCCHHHHHHHHHhCccchhhcccccc--eEEE--EEecCCC--e-EEEEEEecCcCCCCcCCCeeEEEEEEEEc-C
Confidence 356799999999 58766554333222111 1111 0111111 2 255655444 333322212222222223 3
Q ss_pred CcEE-EEEEEecCCCCCCCce-EEE---EEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHH
Q 003874 700 EGWI-VNEVMSLHDVPFDDHF-RVH---FRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIE 774 (790)
Q Consensus 700 ~~~v-v~~~~t~~dVPygd~F-~v~---~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~ 774 (790)
++++ +......+.+|-..-| +++ ..|.|++.+.+++.|++.....++..++ .=+.++.+.+..++-+.++.|-+
T Consensus 143 ~~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP~~l~n~~~~~~~~~~~~~Lr~ 221 (229)
T 1em2_A 143 DRYLSSGIATSHSAKPPTHKYVRGENGPGGMIVLKSASNPRVCTFVWILNTDLKGR-LPRYLIHQSLAATMFEFAFHLRQ 221 (229)
T ss_dssp SEEEEEEEECCCTTSCCCTTSEECEECSEEEEEEECSSCTTCEEEEEEECEECCSS-SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEecccCCCCCCCCCCEeeeecccEEEEEecCCCCCcEEEEEEEEECCCCC-CCHHHHHHHHHHHHHHHHHHHHH
Confidence 4454 4444455788865433 343 5799998765568999999999998875 23556666666666666666555
Q ss_pred HHHH
Q 003874 775 LVER 778 (790)
Q Consensus 775 ~~~k 778 (790)
.+++
T Consensus 222 ~~~~ 225 (229)
T 1em2_A 222 RISE 225 (229)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 5544
No 57
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=80.66 E-value=8.6 Score=36.88 Aligned_cols=144 Identities=9% Similarity=0.018 Sum_probs=77.7
Q ss_pred eEEeeEEecCcccccccccCCCchhHHHHHHH-hCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEEE
Q 003874 19 ILLDQLYQVSPCDLNTFLFAPDSQFRKDLAEL-QGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTYL 97 (790)
Q Consensus 19 ~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~-~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~~ 97 (790)
+-+.-+++++++++|++|.. ......+... ..+.-++. +++ +..+.++.....+++.-..+-.....
T Consensus 29 ~k~~~~v~~s~~~v~~~l~D--~~~~~~W~~~~~~~~vle~------~~~----~~i~y~~~~~p~p~~~RD~v~~~~~~ 96 (189)
T 3qsz_A 29 FRGEVRLKAAADDVVKVLRD--ANAFRQWMPDVAASELLKA------TDT----EQYHYLDNSAPWPVSNRDGVYHFTYE 96 (189)
T ss_dssp EEEEEEESSCHHHHHHHHHC--GGGGGGTSTTEEEEEEEEE------CSS----EEEEEEEECCSSSCCCEEEEEEEEEE
T ss_pred EEEEEEEECCHHHHHHHHHh--HHHhhhHHHhcCEEEEEee------cCC----ceEEEEEeecCCCcCCcceEEEEEEE
Confidence 55667888999999998863 3444333222 22222221 112 23332222233355432222222233
Q ss_pred eeCCceEEEEEeeeCCCCCCCCee----EEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHHHH
Q 003874 98 KANGQEFAILVTVSTPDVPYGNTF----NVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKES 173 (790)
Q Consensus 98 ~~~~~~~~v~~~~~tpdVP~g~~F----~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~~~ 173 (790)
+..+..+.|..+..-|.+|--..| .....|+|+ + ++++|++.....++..|. +-+.++-+.+.+++-..
T Consensus 97 ~~~~g~~~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~-----p-~~~~t~vt~~~~~dp~G~-iP~~lvn~~~~~~~~~~ 169 (189)
T 3qsz_A 97 KAGDGAITVRVEAVPDYLPLRKGKVRIPRAKGQWTLV-----P-DADGVDVTYQMHASPGGS-IPSWLANQTVVETPFGT 169 (189)
T ss_dssp ECTTSCEEEEEEECTTSSCCCTTSEECCCEEEEEEEE-----E-CSSSEEEEEEEEECSCSS-SCHHHHHHTTTHHHHHH
T ss_pred ECCCCeEEEEEEcCCCccCCCCCeEEeeEeeEEEEEE-----E-CCCeEEEEEEEEeCCCCC-CCHHHHHHHHHHHHHHH
Confidence 322235666666555667753322 234779999 5 567899999888888753 33556666666777555
Q ss_pred HHHHHHHH
Q 003874 174 FEQFANLL 181 (790)
Q Consensus 174 ~~~~~~~l 181 (790)
++.|.+.+
T Consensus 170 l~~L~k~~ 177 (189)
T 3qsz_A 170 LKALRSHL 177 (189)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 55544433
No 58
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=80.32 E-value=23 Score=33.04 Aligned_cols=143 Identities=8% Similarity=0.064 Sum_probs=77.6
Q ss_pred ccccCCCHHHHhhhcc-Cch-HHHHHHHHcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEee-cCCC
Q 003874 623 NAELPISVKALMEMFD-GGK-LEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSP-LASG 699 (790)
Q Consensus 623 ~~~~p~s~~~lf~lF~-~~~-f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~-~~~~ 699 (790)
+.+++++++.+|.+|. |.+ ...+++......++..+.|. .+..|.++|. . |.+ .. +..+ ++. ..+.
T Consensus 8 e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~----~Gsir~~~~~---~-G~~-~~-~~kE-rl~~~D~~ 76 (155)
T 1icx_A 8 EQSSTVAPAKLYKALTKDSDEIVPKVIEPIQSVEIVEGNGG----PGTIKKIIAI---H-DGH-TS-FVLH-KLDAIDEA 76 (155)
T ss_dssp EEEESSCHHHHHHHHTTTHHHHHHHHSTTEEEEEEEESSSS----TTCEEEEEEE---S-SSS-EE-EEEE-EEEEEEGG
T ss_pred EEEecCCHHHHHHHHhcCcchhcchhhhhccEEEEEecCCC----CCeEEEEEEe---c-CCc-ce-eEEE-EEEEEecc
Confidence 3467999999999876 655 66777743333344566662 2679999997 1 221 11 1222 222 2222
Q ss_pred CcEEEEEEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHHHH
Q 003874 700 EGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 779 (790)
Q Consensus 700 ~~~vv~~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~k~ 779 (790)
+..+--++.- -|+.-..+=+....+.+.+.+ .++|. |.+.++|.+..-. ..-...+..++.+..+++.++.+
T Consensus 77 ~~~~~y~iie-Gd~~~~~~~~~~~~~~v~~~~--~~gs~--v~w~~~y~~~~~~---~~~~~~~~~~~~~~~~~k~ie~y 148 (155)
T 1icx_A 77 NLTYNYSIIG-GEGLDESLEKISYESKILPGP--DGGSI--GKINVKFHTKGDV---LSETVRDQAKFKGLGLFKAIEGY 148 (155)
T ss_dssp GTEEEEEEEE-ETTSCTTEEEEEEEEEEEECG--GGCEE--EEEEEEEEESSSS---CCHHHHTTHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEe-cCCCccceEEEEEEEEEEecC--CCCEE--EEEEEEEEECCCC---CCHHHHHHHHHHHHHHHHHHHHH
Confidence 3322223333 232211233355566777754 34565 4555566654211 22222223467888999999999
Q ss_pred HHhcc
Q 003874 780 ILFAT 784 (790)
Q Consensus 780 v~~~~ 784 (790)
+..+-
T Consensus 149 ll~~p 153 (155)
T 1icx_A 149 VLAHP 153 (155)
T ss_dssp HHHCT
T ss_pred HHhCC
Confidence 98763
No 59
>2cay_A VPS36 PH domain, vacuolar protein sorting protein 36; transport, ESCRT-II, lipid-binding, multivesicular bodies, membrane; 1.9A {Saccharomyces cerevisiae} SCOP: b.55.1.12
Probab=80.25 E-value=5.1 Score=37.39 Aligned_cols=51 Identities=20% Similarity=0.288 Sum_probs=37.4
Q ss_pred cCceEEEeccEEEEEeccCCCeEEEEEecccceeeEEccccccccCCCcEEEEEE
Q 003874 483 LQGRLFLSARIVGFYANLFGNKTKFFFLWEDIEDIQILSPSLATVGSPSLVIILW 537 (790)
Q Consensus 483 ~~Grlyis~~~icF~s~~~g~~t~~~i~~~dI~~I~k~~~~~~~~~~~~i~i~l~ 537 (790)
..|++|+|...+||-..--.....|.+|+.+|.+++...+.| | ++..|+++
T Consensus 51 k~G~lyLTshRIIyv~~~~~~~~SfslPL~~v~~~e~~~~~f---g-~s~Ki~l~ 101 (145)
T 2cay_A 51 QRGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGFL---T-RSPRLILF 101 (145)
T ss_dssp SSEEEEEESSEEEEEESSCHHHHCEEEEGGGEEEEEEECSSS---S-SSCEEEEE
T ss_pred CccEEEEEcCeEEEecCCCCcceEEEeEhHheeeeeEEcCcc---c-cCceEEEE
Confidence 359999999999996543322367999999999999988644 3 23455544
No 60
>2hth_B Vacuolar protein sorting protein 36; GLUE domain, PH domain, viral budding, ubiquitin complex, protein transport; 2.70A {Homo sapiens} SCOP: b.55.1.12 PDB: 2dx5_A
Probab=78.36 E-value=14 Score=34.21 Aligned_cols=52 Identities=19% Similarity=0.176 Sum_probs=38.7
Q ss_pred cCceEEEeccEEEEEeccCCCeEEEEEecccceeeEEccccccccCCCcEEEEEE
Q 003874 483 LQGRLFLSARIVGFYANLFGNKTKFFFLWEDIEDIQILSPSLATVGSPSLVIILW 537 (790)
Q Consensus 483 ~~Grlyis~~~icF~s~~~g~~t~~~i~~~dI~~I~k~~~~~~~~~~~~i~i~l~ 537 (790)
..|++|+|.+.+||-..-- ....+.|||.+|.+++...+.|. -+|-|++.+.
T Consensus 38 k~G~l~LTshRli~~d~~~-~~~s~~lpl~~v~~~e~~~~~f~--~s~Ki~l~l~ 89 (140)
T 2hth_B 38 DAGTLLLSTHRLIWRDQKN-HECCMAILLSQIVFIEEQAAGIG--KSAKIVVHLH 89 (140)
T ss_dssp CCEEEEEESSEEEEEETTC-CSCCEEEEGGGEEEEEEECCTTS--SCCEEEEEEC
T ss_pred cCCEEEEecCEEEEecCCC-CceEEEEEhHHeeeeeeeccccc--cCceEEEEec
Confidence 3499999999999965543 45779999999999999886442 1255555553
No 61
>2pcs_A Conserved protein; structural genomics, unknown function, ligand binding, PSI-2 structure initiative; HET: UNL; 2.40A {Geobacillus kaustophilus} SCOP: d.129.3.10
Probab=77.73 E-value=35 Score=31.29 Aligned_cols=140 Identities=11% Similarity=0.089 Sum_probs=76.5
Q ss_pred eEEeeEEecCcccccccccCCCchhH-HHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEEE
Q 003874 19 ILLDQLYQVSPCDLNTFLFAPDSQFR-KDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTYL 97 (790)
Q Consensus 19 ~~~~~~~~~~~~~l~~llf~~~s~f~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~~ 97 (790)
+-...++++|++++|++|=. ..-+ +++- .+.++... .++ .....+++.. .+++. ....+-++.
T Consensus 5 i~~~~~i~ap~e~Vw~~l~D--~e~~~~w~p---~~~~~~~~-----~~~--~~~~~~~~~~---g~~~~-~~~~~~~~~ 68 (162)
T 2pcs_A 5 GNGSIELKGTVEEVWSKLMD--PSILSKCIM---GCKSLELI-----GED--KYKADLQIGI---AAVKG-KYDAIIEVT 68 (162)
T ss_dssp EEEEEEEESCHHHHHHHHTC--HHHHHHHST---TEEEEEEE-----ETT--EEEEEEEECC---GGGCE-EEEEEEEEE
T ss_pred EeeEEEecCCHHHHHHHhcC--HHHHHhhCC---CceEeEEe-----CCC--eEEEEEEEEe---eeEEE-EEEEEEEEE
Confidence 45567899999999999974 3444 4432 23322221 122 2222222211 12221 111122333
Q ss_pred eeC-CceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeee--eeeeeeeeccccccHHHHH
Q 003874 98 KAN-GQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQS--TMMRGMIEGGARQGLKESF 174 (790)
Q Consensus 98 ~~~-~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~--~~~K~~Ie~~~~~G~~~~~ 174 (790)
..+ ...+.+.....-+ +..+.....|.|. ..+++.|+|.....+++.+. .++..++.+-++..+...+
T Consensus 69 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~-----~~~~~gT~v~~~~~~~~~g~l~~~~~~l~~~~~~~~~~~~~ 139 (162)
T 2pcs_A 69 DIKPPYHYKLLVNGEGG----PGFVNAEGVIDLT-----PINDECTQLTYTYSAEVGGKVAAIGQRMLGGVAKLLISDFF 139 (162)
T ss_dssp EEETTTEEEEEEEEEET----TEEEEEEEEEEEE-----ESSSSEEEEEEEEEEEEESGGGGGCHHHHHHHHHHHHHHHH
T ss_pred ecCCCcEEEEEEEecCC----CccEEEEEEEEEE-----ecCCCcEEEEEEEEEEECCCHHHhhHHHHHHHHHHHHHHHH
Confidence 333 4566655443322 3344567788898 44557899999999988764 3566666666666666666
Q ss_pred HHHHHHHHh
Q 003874 175 EQFANLLAQ 183 (790)
Q Consensus 175 ~~~~~~l~~ 183 (790)
+.|...|.+
T Consensus 140 ~~lk~~~e~ 148 (162)
T 2pcs_A 140 KKIQKEIAK 148 (162)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhcc
Confidence 666655554
No 62
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=77.55 E-value=27 Score=32.65 Aligned_cols=144 Identities=4% Similarity=0.034 Sum_probs=77.1
Q ss_pred ccccCCCHHHHhhhcc-Cch-HHHHHHHHcCCcceeecCcccCCCCceEEEEEEEecccccCCCceec-eEEEEeecCCC
Q 003874 623 NAELPISVKALMEMFD-GGK-LEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVT-CTQQKSPLASG 699 (790)
Q Consensus 623 ~~~~p~s~~~lf~lF~-~~~-f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt-~~Q~~~~~~~~ 699 (790)
+.+++++++.+|.+|. |.+ ...+++......++..+.|. .+..|.++|. . | ..+. ..++.....+.
T Consensus 8 e~~i~a~a~kvw~~~~~d~~~~~pk~~~~i~s~~i~eG~g~----~Gsir~~~~~--~--G---~~~~~~kErl~~~D~~ 76 (157)
T 1tw0_A 8 ETSSSVAPAKLYKALTKDSDTIAQKIDGPIQSIELVEGNGG----VGTIKKITAN--E--G---DKTSFVLQKVDAIDEA 76 (157)
T ss_dssp EEEESSCHHHHHHHHHHTGGGGGGGSCSSEEEEEEEESSSS----TTCEEEEEEE--E--T---TEEEEEEEEEEEEETT
T ss_pred EEEecCCHHHHHHHHhcCcchhhhhHHhhccEEEEEeCCCC----CCeEEEEEee--C--C---CccceEEEEEEEEecc
Confidence 3467999999999776 654 56666633333344556662 2679999997 1 2 2222 22222222333
Q ss_pred CcEEEEEEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHHHH
Q 003874 700 EGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 779 (790)
Q Consensus 700 ~~~vv~~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~k~ 779 (790)
+..+--++.- -|+.-..+=+....+.+.+.+ .++|. |.+.++|.+..-. ...-......++.+..+++.++++
T Consensus 77 ~~~~~y~iie-Gd~~~~~~~~~~~~~~v~~~~--~~gs~--v~w~~~y~~~~~~--~~~~~~~~~~~~~~~~~~k~ie~y 149 (157)
T 1tw0_A 77 NLGYDYSIVG-GTGLPESLEKLSFETKVVAGS--GGGSI--SKVTLKFHTKGDA--PLSDAVRDDALAKGAGFFKAIEGY 149 (157)
T ss_dssp TTEEEEEEEE-CTTSCTTEEEEEEEEEEEECS--SSSEE--EEEEEEEEESTTC--CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEe-cCCCccceEEEEEEEEEEecC--CCCEE--EEEEEEEEECCCC--CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3332223333 232211233355667777765 34665 4555566644210 111112223467788899999999
Q ss_pred HHhcc
Q 003874 780 ILFAT 784 (790)
Q Consensus 780 v~~~~ 784 (790)
+..+-
T Consensus 150 ll~~p 154 (157)
T 1tw0_A 150 VLANP 154 (157)
T ss_dssp HHHCG
T ss_pred HHhCc
Confidence 88763
No 63
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=76.02 E-value=16 Score=35.65 Aligned_cols=147 Identities=14% Similarity=0.112 Sum_probs=82.7
Q ss_pred eEEeeEEe-cCcccccccccCCCchhHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEee-cCCCceeeEEEEEEEE
Q 003874 19 ILLDQLYQ-VSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKA-ATKLVKAVKATEQQTY 96 (790)
Q Consensus 19 ~~~~~~~~-~~~~~l~~llf~~~s~f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~-~~~~~k~~~~~e~q~~ 96 (790)
+.+--+++ +++++++++|.. ..........-+..++. + .++ .. +.|... ...+++.=..+-....
T Consensus 54 ~k~~~~i~~~~~~~v~~~l~d--~~~r~~Wd~~~~~~~vl-e-----~~~----~~-i~~~~~~~p~p~~~RD~v~~~~~ 120 (214)
T 1ln1_A 54 YKVFGVLEDCSPTLLADIYMD--SDYRKQWDQYVKELYEQ-E-----CNG----ET-VVYWEVKYPFPMSNRDYVYLRQR 120 (214)
T ss_dssp EEEEEEETTSCHHHHHHHHHC--HHHHHHHCTTEEEEEEE-E-----ETT----EE-EEEEEECCCTTSCCEEEEEEEEE
T ss_pred EEEEEEECCCCHHHHHHHHcC--HHHHHHHHHHHhhEEEe-c-----cCC----CE-EEEEEEEcCCCCCCceEEEEEEE
Confidence 45567784 999999999884 45554433322222221 1 122 22 334433 3345542112211222
Q ss_pred Eee--CCc-eEE-EEEeeeCCCCCCCCee----EEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccc
Q 003874 97 LKA--NGQ-EFA-ILVTVSTPDVPYGNTF----NVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQ 168 (790)
Q Consensus 97 ~~~--~~~-~~~-v~~~~~tpdVP~g~~F----~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~ 168 (790)
... +|. .|+ +..++.-|++|-...| .....|+|. +.++++|++.....++..|+ +-+.++.+.+..
T Consensus 121 ~~~~~~g~~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~-----p~~~~~t~v~~~~~~Dp~G~-iP~~l~n~~~~~ 194 (214)
T 1ln1_A 121 RDLDMEGRKIHVILARSTSMPQLGERSGVIRVKQYKQSLAIE-----SDGKKGSKVFMYYFDNPGGQ-IPSWLINWAAKN 194 (214)
T ss_dssp EEECSTTCCEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEE-----ECSSSSEEEEEEEEECCSSC-CCHHHHHHHHHT
T ss_pred EecccCCCeEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEe-----cCCCCceEEEEEEEECCCCc-ccHHHHHHHHHH
Confidence 222 443 454 4567788999864333 245679999 55678999999999998864 123344555667
Q ss_pred cHHHHHHHHHHHHHhh
Q 003874 169 GLKESFEQFANLLAQN 184 (790)
Q Consensus 169 G~~~~~~~~~~~l~~~ 184 (790)
++...+..|.+.+.++
T Consensus 195 ~~~~~l~~l~k~~~~y 210 (214)
T 1ln1_A 195 GVPNFLKDMARACQNY 210 (214)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred HhHHHHHHHHHHHHhc
Confidence 7766666666666544
No 64
>2wxf_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit delta isoform; transferase, phosphoprotein, isoform-specific inhibitors; HET: 039; 1.90A {Mus musculus} PDB: 2wxg_A* 2wxh_A* 2wxi_A* 2wxj_A* 2wxk_A* 2wxl_A* 2wxm_A* 2wxn_A* 2wxo_A* 2wxp_A* 2wxq_A* 2wxr_A 2x38_A*
Probab=75.55 E-value=11 Score=45.69 Aligned_cols=72 Identities=19% Similarity=0.200 Sum_probs=50.2
Q ss_pred CceEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----EeeeecccCCCCCeEeeEEEEEeec---CCCCeEEEEEE
Q 003874 300 DGWVLTVALVEGVNLASSEMTGLSDPYVVFTC--NGK----TRTSSVQLQTCDPQWHDILEFDAME---EPPSVLDVEVF 370 (790)
Q Consensus 300 ~~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l--~~~----~~kT~v~~~tlnP~WnE~f~f~v~~---~~~~~L~v~V~ 370 (790)
-...+.|+|..+.++... ..++-||.+.+ |++ ...|+.+.-..+|.|||.+.|++.- +....|.|+||
T Consensus 215 ~~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~l~~~~~T~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~ 291 (940)
T 2wxf_A 215 LEQPFSIELIEGRKVNAD---ERMKLVVQAGLFHGNEMLCKTVSSSEVNVCSEPVWKQRLEFDISVCDLPRMARLCFALY 291 (940)
T ss_dssp CCSEEEEEEEEEECCCC------CEEEEEEEEEETTEESSCCEECCCEESCSSCEEEEEEEEEEEGGGCCTTCEEEEEEE
T ss_pred cCCceEEEEEEecccCCC---CCceEEEEEEEEECCEEccCceecccccCCCCcccceEEEcccccccCCcccEEEEEEE
Confidence 345899999999998754 34677877665 543 2345444446789999999998643 34678999999
Q ss_pred eeCC
Q 003874 371 DFDG 374 (790)
Q Consensus 371 D~d~ 374 (790)
+...
T Consensus 292 ~~~~ 295 (940)
T 2wxf_A 292 AVVE 295 (940)
T ss_dssp EEC-
T ss_pred EecC
Confidence 9743
No 65
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=75.09 E-value=5.1 Score=39.87 Aligned_cols=147 Identities=7% Similarity=-0.028 Sum_probs=78.6
Q ss_pred EEeeEEecCcccccccccCCCchhHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCC--ceeeEEEEEEEEE
Q 003874 20 LLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKL--VKAVKATEQQTYL 97 (790)
Q Consensus 20 ~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~--~k~~~~~e~q~~~ 97 (790)
-+--++++++++++++|+.+... .+|-.....+.-++.- +++ +..+-|+.+...+ ++.=-..-.....
T Consensus 70 k~~~~v~~~~~~v~~~l~d~~~r-~~Wd~~~~~~~vle~i-----d~~----~~I~y~~~~~~~~~~v~~RDfv~~r~~~ 139 (224)
T 1jss_A 70 KAQGVMDDVVNNVIDHIRPGPWR-LDWDRLMTSLDVLEHF-----EEN----CCVMRYTTAGQLLNIISPREFVDFSYTV 139 (224)
T ss_dssp EEEEEESSCHHHHHHHHSSSTTH-HHHCSSEEEEEEEEEC-----STT----EEEEEEEECCBTTTTBCCEEEEEEEEEE
T ss_pred EEEEEEeCCHHHHHHHHhCcccc-cccccceeeEEEEEEc-----CCC----eEEEEEEcccccCCCCCCCeEEEEEEEE
Confidence 34567789999999999853321 2332222222222211 112 4444444432222 4332222222233
Q ss_pred eeCCceEEEEEeeeCCCCCCCCeeEEE---EEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHHHHH
Q 003874 98 KANGQEFAILVTVSTPDVPYGNTFNVQ---LLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKESF 174 (790)
Q Consensus 98 ~~~~~~~~v~~~~~tpdVP~g~~F~v~---~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~~~~ 174 (790)
+.++..+++..++.-|++|- ++-++. ..|+|.|-|+ ++++|++..-..++..|. +=+.++.+.+-.++.+++
T Consensus 140 ~~~~~~vi~~~Sv~hp~~~~-g~VR~~~~~~g~~i~p~~~---~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~~~~~~ 214 (224)
T 1jss_A 140 GYEEGLLSCGVSVEWSETRP-EFVRGYNHPCGWFCVPLKD---SPSQSLLTGYIQTDLRGM-IPQSAVDTAMASTLANFY 214 (224)
T ss_dssp EETTEEEEEEEECCCCCCCT-TSEECEECSEEEEEEEETT---EEEEEEEEEEECEECCSC-CCHHHHHHHHHHHHHHHH
T ss_pred EcCCeEEEEEeeeecCCCCC-CCEEEEecccEEEEEEcCC---CCCceEEEEEEEeCCCCC-ccHHHHHHHHHHhHHHHH
Confidence 44444444556666788875 444444 5699995322 235899888888888774 124556666667776666
Q ss_pred HHHHHHH
Q 003874 175 EQFANLL 181 (790)
Q Consensus 175 ~~~~~~l 181 (790)
..|.+.+
T Consensus 215 ~~Lr~~~ 221 (224)
T 1jss_A 215 SDLRKGL 221 (224)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 6555544
No 66
>3qsz_A STAR-related lipid transfer protein; structural genomics, PSI-biology; 2.39A {Xanthomonas axonopodis PV}
Probab=73.51 E-value=29 Score=33.04 Aligned_cols=141 Identities=10% Similarity=0.012 Sum_probs=74.6
Q ss_pred cccCCCHHHHhhhccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEecccccCCCc-eeceEEEEeecCCCCcE
Q 003874 624 AELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGG-EVTCTQQKSPLASGEGW 702 (790)
Q Consensus 624 ~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~-~vt~~Q~~~~~~~~~~~ 702 (790)
..++.+++.+|+++.|-+...++...+....+-.. .++ ...+.+.++.|. |... ..+.........++ .+
T Consensus 33 ~~v~~s~~~v~~~l~D~~~~~~W~~~~~~~~vle~-----~~~--~~i~y~~~~~p~-p~~~RD~v~~~~~~~~~~g-~~ 103 (189)
T 3qsz_A 33 VRLKAAADDVVKVLRDANAFRQWMPDVAASELLKA-----TDT--EQYHYLDNSAPW-PVSNRDGVYHFTYEKAGDG-AI 103 (189)
T ss_dssp EEESSCHHHHHHHHHCGGGGGGTSTTEEEEEEEEE-----CSS--EEEEEEEECCSS-SCCCEEEEEEEEEEECTTS-CE
T ss_pred EEEECCHHHHHHHHHhHHHhhhHHHhcCEEEEEee-----cCC--ceEEEEEeecCC-CcCCcceEEEEEEEECCCC-eE
Confidence 46689999999977676665555443322222111 111 333434433332 2112 22222222222333 45
Q ss_pred EEEEEEecCCCCCCCce----EEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHH
Q 003874 703 IVNEVMSLHDVPFDDHF----RVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVE 777 (790)
Q Consensus 703 vv~~~~t~~dVPygd~F----~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~ 777 (790)
++.-....+.+|-...| .....|.|++ + +++|++.....++..++ +-+..+.+.+.+.+-..++.|-+.++
T Consensus 104 ~i~~~~~~~~~P~~~~~VR~~~~~~~~~i~p-~--~~~t~vt~~~~~dp~G~-iP~~lvn~~~~~~~~~~l~~L~k~~~ 178 (189)
T 3qsz_A 104 TVRVEAVPDYLPLRKGKVRIPRAKGQWTLVP-D--ADGVDVTYQMHASPGGS-IPSWLANQTVVETPFGTLKALRSHLR 178 (189)
T ss_dssp EEEEEECTTSSCCCTTSEECCCEEEEEEEEE-C--SSSEEEEEEEEECSCSS-SCHHHHHHTTTHHHHHHHHHHHHHHT
T ss_pred EEEEEcCCCccCCCCCeEEeeEeeEEEEEEE-C--CCeEEEEEEEEeCCCCC-CCHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 44433344666654332 3458899999 5 67999999999998743 33555555555444555555544443
No 67
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=73.23 E-value=13 Score=36.97 Aligned_cols=148 Identities=10% Similarity=0.051 Sum_probs=84.2
Q ss_pred EeeEEecCcccccccc--cCCCchhHHHHHH-HhCccceeeCcCcccCCCCceeEEEEEEEeec---CCCceeeEEEEEE
Q 003874 21 LDQLYQVSPCDLNTFL--FAPDSQFRKDLAE-LQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAA---TKLVKAVKATEQQ 94 (790)
Q Consensus 21 ~~~~~~~~~~~l~~ll--f~~~s~f~~~~~~-~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~---~~~~k~~~~~e~q 94 (790)
+--++++++++++++| +. ......... ...+.-++.-+ ++ +.. .|.... ..+++.=-..--.
T Consensus 71 ~~~~v~~~~~~v~~~l~~~d--~~~r~~Wd~~~~~~~vle~i~-----~~----~~i-~~~~~~~~~~~~v~~RDfv~~r 138 (231)
T 2r55_A 71 GEGIVYGTLEEVWDCVKPAV--GGLRVKWDENVTGFEIIQSIT-----DT----LCV-SRTSTPSAAMKLISPRDFVDLV 138 (231)
T ss_dssp EEEEESSCHHHHHHHHCC----CCSHHHHCTTCSEEEEEEECS-----SS----EEE-EEEECCCBTTTTBCCEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHhhC--cchhhhhccccceeEEEEEcC-----CC----EEE-EEEEeccccCCccCCCeEEEEE
Confidence 4456789999999999 84 333332221 22222222221 11 223 343332 2345432222222
Q ss_pred EEEeeCCceEE-EEEeeeCCCCCCC-CeeEEE---EEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeecccccc
Q 003874 95 TYLKANGQEFA-ILVTVSTPDVPYG-NTFNVQ---LLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQG 169 (790)
Q Consensus 95 ~~~~~~~~~~~-v~~~~~tpdVP~g-~~F~v~---~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G 169 (790)
.....++..|+ +..++.-|++|-- ++-++. ..|+|.|-|+ +++.|++.....++..|. .=+.++.+.+..|
T Consensus 139 ~~~~~~~g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~---~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~ 214 (231)
T 2r55_A 139 LVKRYEDGTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPG---EPTKTNLVTFFHTDLSGY-LPQNVVDSFFPRS 214 (231)
T ss_dssp EEEECTTSCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC-----CCCEEEEEEECEECCSS-CCHHHHHHHHHHH
T ss_pred EEEEcCCCEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCC---CCCcEEEEEEEEeCCCCC-ccHHHHHHHHhHh
Confidence 22333444454 6778888888854 334444 3588995332 357899999888988875 2267777788888
Q ss_pred HHHHHHHHHHHHHhh
Q 003874 170 LKESFEQFANLLAQN 184 (790)
Q Consensus 170 ~~~~~~~~~~~l~~~ 184 (790)
+-..++.|.+.+.++
T Consensus 215 ~~~~~~~Lr~~~~~~ 229 (231)
T 2r55_A 215 MTRFYANLQKAVKQF 229 (231)
T ss_dssp HHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHh
Confidence 888888888777665
No 68
>3l4c_A Dedicator of cytokinesis protein 1; DOCK180, DOCK1, phosphoinositide specificity, guanine exchan factor, RHO GTPase, cytoskeleton, cell migration; 2.37A {Homo sapiens}
Probab=72.31 E-value=41 Score=33.40 Aligned_cols=41 Identities=17% Similarity=0.203 Sum_probs=32.4
Q ss_pred eEeeeecccCCCCCeEeeEEEEEeecCC--CCeEEEEEEeeCC
Q 003874 334 KTRTSSVQLQTCDPQWHDILEFDAMEEP--PSVLDVEVFDFDG 374 (790)
Q Consensus 334 ~~~kT~v~~~tlnP~WnE~f~f~v~~~~--~~~L~v~V~D~d~ 374 (790)
..++|-|...+.+|.|+|++.+.+..+. ...|.|++++...
T Consensus 77 se~~S~V~YHnk~P~w~EtIKi~LP~~~~~~~HLlFtFrH~S~ 119 (220)
T 3l4c_A 77 SEYKSVIYYQVKQPRWFETVKVAIPIEDVNRSHLRFTFRHRSS 119 (220)
T ss_dssp SCEECCCCTTCSSCCCCEEEEEEECTTSSTTEEEEEEEEECCC
T ss_pred eeEEEEEEEcCCCCCceEeEEEeeChhhcCCeEEEEEEEEecc
Confidence 3578889889999999999999986553 4578888877543
No 69
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=70.91 E-value=23 Score=34.46 Aligned_cols=152 Identities=11% Similarity=0.053 Sum_probs=80.9
Q ss_pred CCCCCCceEEeeEEecCcccccccccCCCchhHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEE
Q 003874 12 PENLQGGILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKAT 91 (790)
Q Consensus 12 ~~~~~g~~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~ 91 (790)
|.+-+-...+-+.+++|+++++.++=..+. .+.....=+..++..++- + .--.|.++|.-. .+ ...+.
T Consensus 30 ~~~~~~~~~~~~~I~Apa~~vW~lv~df~~--~~~w~p~I~s~e~~eGdg-----~-vGsVR~~t~~~G--~p--~~~vk 97 (190)
T 3kl1_A 30 PDPTTCTSLITQRIHAPASVVWPLIRRFDN--PERYKHFVKRCRLISGDG-----D-VGSVREVTVISG--LP--ASTST 97 (190)
T ss_dssp CCTTEEEEEEEEEESSCHHHHHHHHHCTTC--GGGTCSSEEEEEEEESSS-----S-TTCEEEEEECSS--SS--CEEEE
T ss_pred CCCCceeEEEEEEecCCHHHHHHHHhCCCC--hhHcccccCEEEEEcCCC-----C-CCeEEEEEecCC--Cc--cceEE
Confidence 455566678889999999999998643222 333322223455555551 1 124799999533 12 23344
Q ss_pred EEEEEEeeCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHH
Q 003874 92 EQQTYLKANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLK 171 (790)
Q Consensus 92 e~q~~~~~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~ 171 (790)
|... ..|.....+.-++.--|+|..++=.+..-.-+.++|+ +++.|+ |.|..+|. ...|.=+..+..-+.
T Consensus 98 ErL~--~iD~~~~~~sY~iieG~~~~~~Y~s~~~v~~~~~~~~---~~~gt~--V~Ws~~f~---~p~g~~~e~~~~~~~ 167 (190)
T 3kl1_A 98 ERLE--FVDDDHRVLSFRVVGGEHRLKNYKSVTSVNEFLNQDS---GKVYTV--VLESYTVD---IPEGNTEEDTKMFVD 167 (190)
T ss_dssp EEEE--EEETTTTEEEEEEEEESSSCCSCEEEEEEEEEEC-CC---CCEEEE--EEEEEEEE---CCTTCCHHHHHHHHH
T ss_pred EEEE--EEeccCCEEEEEEEecCCccccEEEEEEEEecccccC---CCCcEE--EEEEEEEE---cCCCCCHHHHHHHHH
Confidence 4443 3444433333344445889998888877777774322 345565 45555553 112222222333344
Q ss_pred HHHHHHHHHHHhhc
Q 003874 172 ESFEQFANLLAQNL 185 (790)
Q Consensus 172 ~~~~~~~~~l~~~~ 185 (790)
..|+.-...|++..
T Consensus 168 ~~~~~gL~~L~~~~ 181 (190)
T 3kl1_A 168 TVVKLNLQKLGVAA 181 (190)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 44555455555544
No 70
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=70.03 E-value=3.7 Score=40.83 Aligned_cols=143 Identities=13% Similarity=0.066 Sum_probs=77.0
Q ss_pred EeeEEecCcccccccccCCCchhH-HHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeec---CCCceeeEEEEEEEE
Q 003874 21 LDQLYQVSPCDLNTFLFAPDSQFR-KDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAA---TKLVKAVKATEQQTY 96 (790)
Q Consensus 21 ~~~~~~~~~~~l~~llf~~~s~f~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~---~~~~k~~~~~e~q~~ 96 (790)
+--++++++++++++|+. |.... +|-...+.+.-++.- +++ +. +.|+... ..+++.=-..--...
T Consensus 59 ~~~~v~~~~~~v~~~l~~-d~~~r~~Wd~~~~~~~vle~~-----~~~----t~-I~y~~~~~~~~~~v~~RDfv~~r~~ 127 (221)
T 3p0l_A 59 LEVVVDQPMERLYEELVE-RMEAMGEWNPNVKEIKVLQKI-----GKD----TF-ITHELAAEAAGNLVGPRDFVSVRCA 127 (221)
T ss_dssp EEEEESSCHHHHHHHHTT-TGGGTTTSCTTCSEEEEEEEC-----SSS----EE-EEEEEECC---CCSCCEEEEEEEEE
T ss_pred EEEEEcCCHHHHHHHHHh-ccchhhhcCcchheEEEEEec-----CCC----eE-EEEEeeccccCCccCCceEEEEEEE
Confidence 345678999999999984 33322 222222222222211 112 43 4554432 245543222222222
Q ss_pred EeeCCceEE-EEEeeeCCCCCCCC-eeEE---EEEEEEecCCCCCCCCC--ccEEEEEEEEEEeeeeeeeeeeecccccc
Q 003874 97 LKANGQEFA-ILVTVSTPDVPYGN-TFNV---QLLYKIIPGPELSSGED--SSHLIISWGIDFHQSTMMRGMIEGGARQG 169 (790)
Q Consensus 97 ~~~~~~~~~-v~~~~~tpdVP~g~-~F~v---~~~y~~~~~~~~~~~~~--~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G 169 (790)
.+. ++.|+ +..++.-|++|--. +-.+ ...|+|.| .+++ +|++..-..++..|. .=+.++.+.+.++
T Consensus 128 ~~~-~~~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p-----~~~~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~ 200 (221)
T 3p0l_A 128 KRR-GSTCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHP-----LAGSPSKTKLTWLLSIDLKGW-LPKSIINQVLSQT 200 (221)
T ss_dssp EEC-SSCEEECCEECCCTTSCCCTTSEECEECSCEEEEEE-----ETTEEEEEEEEEEECEECCSS-CCHHHHHHHHHHH
T ss_pred EEc-CCeEEEEEEeccCCCCCCCCCeEEEeccceEEEEEE-----CCCCCCcEEEEEEEEecCCCC-CCHHHHHHHHHHH
Confidence 233 45554 44677778888643 3333 35799994 4434 899998889988876 3455667666677
Q ss_pred HHHHHHHHHHHH
Q 003874 170 LKESFEQFANLL 181 (790)
Q Consensus 170 ~~~~~~~~~~~l 181 (790)
+-++++.|.+.+
T Consensus 201 ~~~~~~~Lr~~~ 212 (221)
T 3p0l_A 201 QVDFANHLRKRL 212 (221)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHH
Confidence 755555544443
No 71
>1jss_A Stard4, cholesterol-regulated start protein 4; start domain, structural genomics, PSI, protein structure initiative; 2.20A {Mus musculus} SCOP: d.129.3.2
Probab=69.82 E-value=27 Score=34.52 Aligned_cols=74 Identities=8% Similarity=0.011 Sum_probs=44.8
Q ss_pred CcEEEE-EEEecCCCCCCCceEEE---EEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHH
Q 003874 700 EGWIVN-EVMSLHDVPFDDHFRVH---FRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIEL 775 (790)
Q Consensus 700 ~~~vv~-~~~t~~dVPygd~F~v~---~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~ 775 (790)
+++++- .....++.| .++-+++ ..|.|++.+.++++|+|.-.+.++..++. =+.++.+.+.+.+.+.++.|-+.
T Consensus 143 ~~~vi~~~Sv~hp~~~-~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~i-P~~lvn~~~~~~~~~~~~~Lr~~ 220 (224)
T 1jss_A 143 EGLLSCGVSVEWSETR-PEFVRGYNHPCGWFCVPLKDSPSQSLLTGYIQTDLRGMI-PQSAVDTAMASTLANFYSDLRKG 220 (224)
T ss_dssp TEEEEEEEECCCCCCC-TTSEECEECSEEEEEEEETTEEEEEEEEEEECEECCSCC-CHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEeeeecCCCC-CCCEEEEecccEEEEEEcCCCCCceEEEEEEEeCCCCCc-cHHHHHHHHHHhHHHHHHHHHHH
Confidence 445543 333346665 3565655 66999998744578999999999987642 24555555554555555444333
No 72
>2r55_A STAR-related lipid transfer protein 5; alpha and beta protein, cholesterol binding, structural GENO structural genomics consortium, SGC; 2.50A {Homo sapiens}
Probab=68.26 E-value=92 Score=30.52 Aligned_cols=147 Identities=7% Similarity=-0.051 Sum_probs=75.6
Q ss_pred cccCCCHHHHhhhc--cCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEeccccc--CCCceeceEEEEeecCCC
Q 003874 624 AELPISVKALMEMF--DGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVS--IFGGEVTCTQQKSPLASG 699 (790)
Q Consensus 624 ~~~p~s~~~lf~lF--~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~--~~~~~vt~~Q~~~~~~~~ 699 (790)
.+++++++.+|+++ .|.+...++.... .+..+=.- .+. .. .+.|.+..+.. +..+.=..........++
T Consensus 73 ~~v~~~~~~v~~~l~~~d~~~r~~Wd~~~--~~~~vle~--i~~--~~-~i~~~~~~~~~~~~v~~RDfv~~r~~~~~~~ 145 (231)
T 2r55_A 73 GIVYGTLEEVWDCVKPAVGGLRVKWDENV--TGFEIIQS--ITD--TL-CVSRTSTPSAAMKLISPRDFVDLVLVKRYED 145 (231)
T ss_dssp EEESSCHHHHHHHHCC--CCSHHHHCTTC--SEEEEEEE--CSS--SE-EEEEEECCCBTTTTBCCEEEEEEEEEEECTT
T ss_pred EEECCCHHHHHHHHHhhCcchhhhhcccc--ceeEEEEE--cCC--CE-EEEEEEeccccCCccCCCeEEEEEEEEEcCC
Confidence 46699999999944 2555444443222 22221111 111 12 24454433332 212221122222222334
Q ss_pred CcEE-EEEEEecCCCCCC-CceEEE---EEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHH
Q 003874 700 EGWI-VNEVMSLHDVPFD-DHFRVH---FRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIE 774 (790)
Q Consensus 700 ~~~v-v~~~~t~~dVPyg-d~F~v~---~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~ 774 (790)
..|+ +......+++|-. ++-+++ ..|.|++.+.++++|++.....++..++. -+.++.+.+..++.+.++.|-+
T Consensus 146 g~~vi~~~Sv~~~~~P~~~~~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~i-P~~lvn~~~~~~~~~~~~~Lr~ 224 (231)
T 2r55_A 146 GTISSNATHVEHPLCPPKPGFVRGFNHPCGCFCEPLPGEPTKTNLVTFFHTDLSGYL-PQNVVDSFFPRSMTRFYANLQK 224 (231)
T ss_dssp SCEEEEEEECCCTTSCCCTTCEEEEECSEEEEEEECC--CCCEEEEEEECEECCSSC-CHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEeccCCCCCCCCCCEEEEEEeeEEEEEEeCCCCCcEEEEEEEEeCCCCCc-cHHHHHHHHhHhHHHHHHHHHH
Confidence 4465 4544445778765 444454 35889987644679999999999987652 2566666666566665555544
Q ss_pred HHHH
Q 003874 775 LVER 778 (790)
Q Consensus 775 ~~~k 778 (790)
.+++
T Consensus 225 ~~~~ 228 (231)
T 2r55_A 225 AVKQ 228 (231)
T ss_dssp HHHG
T ss_pred HHHH
Confidence 4443
No 73
>2yrb_A Protein fantom; beta sandwich, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.7.1.1
Probab=68.09 E-value=20 Score=33.74 Aligned_cols=123 Identities=11% Similarity=0.082 Sum_probs=80.4
Q ss_pred CCceEEEEEEEEeecCCCCC-CCCCCCcEEEEEEC---CeEeeeecccCCCCCeEeeEEEEEeecCC-------CCeEEE
Q 003874 299 GDGWVLTVALVEGVNLASSE-MTGLSDPYVVFTCN---GKTRTSSVQLQTCDPQWHDILEFDAMEEP-------PSVLDV 367 (790)
Q Consensus 299 ~~~g~L~V~vl~A~~L~~~d-~~g~sDPyV~v~l~---~~~~kT~v~~~tlnP~WnE~f~f~v~~~~-------~~~L~v 367 (790)
...+.+.|+|.++.--+..- ..+..+|..-+.+. -+...|.+.. ..+|.+|-+-.|.+..+. ...+.+
T Consensus 15 ~gEnlfEihi~~~~~~~~~l~~~~d~~p~tF~t~dF~dfEtq~Tpv~~-G~~p~y~fts~Y~V~~d~~fl~yL~~~~l~l 93 (156)
T 2yrb_A 15 RGENLFEIHINKVTFSSEVLQASGDKEPVTFCTYAFYDFELQTTPVVR-GLHPEYNFTSQYLVHVNDLFLQYIQKNTITL 93 (156)
T ss_dssp SSCEEEEEEEEEECCCHHHHHHHCSSCCEEEEEECSTTCCCEECCCEE-SSSCCCCEEEEEEECCSHHHHHHHHHCCEEE
T ss_pred CCCcEEEEEEeEEEEcHHHHhhccccCCcEEEEEEEeceEeeeccccc-CCCCCcceEEEEEEEeCHHHHHHHhcCCEEE
Confidence 34578999999886322110 12345787666663 4556666665 789999998888874332 347888
Q ss_pred EEEeeCCCCCCCCccccEEEeceecCC-CCceeEEEEccccccC-cCCceeEEEEEEec
Q 003874 368 EVFDFDGPFDQATSLGHAEINFLKHTS-TELADMWVSLEGKLAQ-SAQSKVHLRIFLEN 424 (790)
Q Consensus 368 ~V~D~d~~~~~dd~LG~~~i~L~~l~~-~~~~~~w~~L~~k~~~-~~~G~l~L~i~l~~ 424 (790)
++..... +..+.||.++|+|..+.. ......-.+|.+..+. ..-|.|...+.|+.
T Consensus 94 ELhqa~g--~~~~tla~~~I~l~~lLe~~~~i~g~~~L~g~~g~~~~~G~LeywiRL~~ 150 (156)
T 2yrb_A 94 EVHQAYS--TEYETIAACQLKFHEILEKSGRIFCTASLIGTKGDIPNFGTVEYWFRLRV 150 (156)
T ss_dssp EEEEECS--SCEEEEEEEEECCSHHHHCCSCEEEEEEECBSSSCCTTSEEEEEEEEEEE
T ss_pred EEEEeeC--CCceEEEEEEEEhHHhhCcCCceEEEEEEEcCCCCcceEEEEEEEEEEec
Confidence 8888765 456789999999999753 3334456677765442 24577776665543
No 74
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=67.83 E-value=76 Score=29.45 Aligned_cols=143 Identities=9% Similarity=0.101 Sum_probs=75.9
Q ss_pred ccccCCCHHHHhhhcc-Cch-HHHHHHH-HcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCC
Q 003874 623 NAELPISVKALMEMFD-GGK-LEHQVME-KSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 699 (790)
Q Consensus 623 ~~~~p~s~~~lf~lF~-~~~-f~~~~~~-~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~ 699 (790)
+.+++++++.+|.+|. |-. ...+++- .....++..+.|. .+..|.++|. + |.. .. +..+ ++...|.
T Consensus 8 e~~i~ap~~~vw~~~~~d~~~~~pk~~P~~i~s~~~~eGdgg----~Gsvr~~~~~---~-G~~-~~-~~kE-rl~~~D~ 76 (159)
T 1e09_A 8 EFTSEIPPPRLFKAFVLDADNLVPKIAPQAIKHSEILEGDGG----PGTIKKITFG---E-GSQ-YG-YVKH-KIDSIDK 76 (159)
T ss_dssp EEEESSCHHHHHHHHTTTHHHHHHHHCTTTEEEEEEEESSSS----TTCEEEEEEC---C-SSS-CE-EEEE-EEEEEET
T ss_pred EEEecCCHHHHHHHHhcCccccchhhChhhccEEEEEeCCCC----CceEEEEEec---C-CCC-ce-EEEE-EEEEEcC
Confidence 3467999999999886 654 5677774 3333345566662 2679999996 1 211 11 1222 2332223
Q ss_pred CcEEEE-EEEecCCCCCCCce-EEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHH
Q 003874 700 EGWIVN-EVMSLHDVPFDDHF-RVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVE 777 (790)
Q Consensus 700 ~~~vv~-~~~t~~dVPygd~F-~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~ 777 (790)
....+. ++.- +-+.++.| +....+.+.+.+ .++|. |.+.++|.+..-. .+.-...+..++.+..+++.++
T Consensus 77 ~~~~~~y~iie--G~~~~~~~~~~~~~~~v~~~~--~~gs~--v~wt~~y~~~~~~--~~~~~~~~~~~~~~~~~~k~ie 148 (159)
T 1e09_A 77 ENYSYSYTLIE--GDALGDTLEKISYETKLVASP--SGGSI--IKSTSHYHTKGNV--EIKEEHVKAGKEKASNLFKLIE 148 (159)
T ss_dssp TTTEEEEEECC--CTTTGGGEEEEEEEEEECCCT--TSSEE--EEEEEEEEECSSC--CCCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEEEe--cccCcccceEEEEEEEEEecC--CCCEE--EEEEEEEEECCCC--CCCHHHHHHHHHHHHHHHHHHH
Confidence 333333 3322 22222222 244455555544 35665 4555666653111 0111112234678889999999
Q ss_pred HHHHhcc
Q 003874 778 REILFAT 784 (790)
Q Consensus 778 k~v~~~~ 784 (790)
+++..+.
T Consensus 149 ~yll~~~ 155 (159)
T 1e09_A 149 TYLKGHP 155 (159)
T ss_dssp HHHHHCT
T ss_pred HHHHhCh
Confidence 9998764
No 75
>1ln1_A PC-TP, phosphatidylcholine transfer protein; start domain, lipid binding protein; HET: DLP; 2.40A {Homo sapiens} SCOP: d.129.3.2 PDB: 1ln2_A* 1ln3_A*
Probab=67.12 E-value=57 Score=31.51 Aligned_cols=142 Identities=13% Similarity=0.067 Sum_probs=73.9
Q ss_pred cccC-CCHHHHhhhccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEecccccCCCc-eeceEEEEeec-CCCC
Q 003874 624 AELP-ISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGG-EVTCTQQKSPL-ASGE 700 (790)
Q Consensus 624 ~~~p-~s~~~lf~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~-~vt~~Q~~~~~-~~~~ 700 (790)
.+++ ++++.+|+++.|.+...++........+ + +. .+ ...+.|.++.|. |... ........... .++.
T Consensus 58 ~~i~~~~~~~v~~~l~d~~~r~~Wd~~~~~~~v-l---e~--~~--~~i~~~~~~~p~-p~~~RD~v~~~~~~~~~~~g~ 128 (214)
T 1ln1_A 58 GVLEDCSPTLLADIYMDSDYRKQWDQYVKELYE-Q---EC--NG--ETVVYWEVKYPF-PMSNRDYVYLRQRRDLDMEGR 128 (214)
T ss_dssp EEETTSCHHHHHHHHHCHHHHHHHCTTEEEEEE-E---EE--TT--EEEEEEEECCCT-TSCCEEEEEEEEEEEECSTTC
T ss_pred EEECCCCHHHHHHHHcCHHHHHHHHHHHhhEEE-e---cc--CC--CEEEEEEEEcCC-CCCCceEEEEEEEEecccCCC
Confidence 4675 9999999966565655555543322222 1 11 23 334444434332 2211 22222211122 2443
Q ss_pred -cEEE-EEEEecCCCCCCCce----EEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHH
Q 003874 701 -GWIV-NEVMSLHDVPFDDHF----RVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIE 774 (790)
Q Consensus 701 -~~vv-~~~~t~~dVPygd~F----~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~ 774 (790)
.|++ ......|++|-...| .....|+|++.+ +++|++.....++..++. =+.++.+.+..++...++.|-+
T Consensus 129 ~~~~i~~~Sv~~p~~P~~~~~VR~~~~~~~~~i~p~~--~~~t~v~~~~~~Dp~G~i-P~~l~n~~~~~~~~~~l~~l~k 205 (214)
T 1ln1_A 129 KIHVILARSTSMPQLGERSGVIRVKQYKQSLAIESDG--KKGSKVFMYYFDNPGGQI-PSWLINWAAKNGVPNFLKDMAR 205 (214)
T ss_dssp CEEEEEEEECCBTTBCCCTTSEEECCEEEEEEEEECS--SSSEEEEEEEEECCSSCC-CHHHHHHHHHTHHHHHHHHHHH
T ss_pred eEEEEEEecccCCCCCCCCCcEEEEEEEEEEEEecCC--CCceEEEEEEEECCCCcc-cHHHHHHHHHHHhHHHHHHHHH
Confidence 4544 444445788864444 245679999876 689999999999987542 2333333333344444444444
Q ss_pred HHH
Q 003874 775 LVE 777 (790)
Q Consensus 775 ~~~ 777 (790)
.++
T Consensus 206 ~~~ 208 (214)
T 1ln1_A 206 ACQ 208 (214)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 76
>2qim_A PR10.2B; trans-zeatin, cytokinin, plant hormones, plant protein, PR-1 protein, pathogenesis-related protein, allergen; HET: ZEA; 1.35A {Lupinus luteus} PDB: 3e85_A* 1xdf_A* 2k7h_A
Probab=65.84 E-value=24 Score=32.94 Aligned_cols=118 Identities=10% Similarity=0.085 Sum_probs=65.6
Q ss_pred ceEEeeEEecCcccccccccCCCch-hHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEE
Q 003874 18 GILLDQLYQVSPCDLNTFLFAPDSQ-FRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTY 96 (790)
Q Consensus 18 ~~~~~~~~~~~~~~l~~llf~~~s~-f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~ 96 (790)
.+-...++++|++++|.++-. +.. .+..++..=+..++..++| ... -.|.++|. + ..++ ..+.|+-.
T Consensus 5 ~~~~e~~i~a~a~kvw~~~~~-d~~~~~pk~~~~i~s~~i~eGdg--g~G----sir~~~~~-~-g~~~--~~~kErl~- 72 (158)
T 2qim_A 5 TFQDEYTSTIAPAKLYKALVT-DADIIIPKAVETIQSVEIVEGNG--GPG----TIKKLTFI-E-GGES--KYVLHKIE- 72 (158)
T ss_dssp EEEEEEEESSCHHHHHHHHTT-THHHHHHHHCTTEEEEEEEESSS--STT----CEEEEEEE-E-TTEE--EEEEEEEE-
T ss_pred EEEEEEEecCCHHHHHHHHhc-CccchhhhHHhhCcEEEEEecCC--CCC----eEEEEEEc-C-CCcc--eeEEEEEE-
Confidence 455678899999999999773 333 3344445555566677877 212 27899997 2 2222 22344433
Q ss_pred EeeCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeee
Q 003874 97 LKANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQS 155 (790)
Q Consensus 97 ~~~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~ 155 (790)
..|.....+.-++.=-|+.-.+.=+....+.+.| .+++.| .|.|.++|...
T Consensus 73 -~~D~~~~~~~y~iieG~~~~~~~~~~~~~~~v~~-----~~~~gs--~v~wt~~y~~~ 123 (158)
T 2qim_A 73 -AIDEANLGYNYSIVGGVGLPDTIEKISFETKLVE-----GANGGS--IGKVTIKIETK 123 (158)
T ss_dssp -EEEGGGTEEEEEEEEESSCCCSEEEEEEEEEEEE-----CSTTCE--EEEEEEEEEES
T ss_pred -EEecCCCEEEEEEEeccCCccceEEEEEEEEEEe-----cCCCCE--EEEEEEEEEEC
Confidence 3444444444444433433333334455556674 333456 46777788765
No 77
>1icx_A Protein LLR18A, LLPR10.1A; 7-stranded beta sheet, C-terminal helix, allergen; 1.95A {Lupinus luteus} SCOP: d.129.3.1 PDB: 1ifv_A
Probab=65.01 E-value=29 Score=32.29 Aligned_cols=144 Identities=14% Similarity=0.090 Sum_probs=75.5
Q ss_pred eEEeeEEecCcccccccccCCCch-hHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEEE
Q 003874 19 ILLDQLYQVSPCDLNTFLFAPDSQ-FRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTYL 97 (790)
Q Consensus 19 ~~~~~~~~~~~~~l~~llf~~~s~-f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~~ 97 (790)
+-...+.++|++++|.++-. +.. .+..++..=+..++..++| ... -.|.++|. . ..++ ..+.|.-.
T Consensus 5 ~~~e~~i~a~a~kvw~~~~~-d~~~~~pk~~~~i~s~~i~eG~g--~~G----sir~~~~~-~-G~~~--~~~kErl~-- 71 (155)
T 1icx_A 5 FENEQSSTVAPAKLYKALTK-DSDEIVPKVIEPIQSVEIVEGNG--GPG----TIKKIIAI-H-DGHT--SFVLHKLD-- 71 (155)
T ss_dssp EEEEEEESSCHHHHHHHHTT-THHHHHHHHSTTEEEEEEEESSS--STT----CEEEEEEE-S-SSSE--EEEEEEEE--
T ss_pred EEEEEEecCCHHHHHHHHhc-CcchhcchhhhhccEEEEEecCC--CCC----eEEEEEEe-c-CCcc--eeEEEEEE--
Confidence 44567889999999999774 333 3344445555556677876 212 27999997 2 2332 22444433
Q ss_pred eeCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHHHHHHHH
Q 003874 98 KANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKESFEQF 177 (790)
Q Consensus 98 ~~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~~~~~~~ 177 (790)
..|.....+.-++.=-|+.-.++=+....+.+.| .+++.| .|.|.++|....-. +=|-.. .-.++.+..+
T Consensus 72 ~~D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~-----~~~~gs--~v~w~~~y~~~~~~--~~~~~~-~~~~~~~~~~ 141 (155)
T 1icx_A 72 AIDEANLTYNYSIIGGEGLDESLEKISYESKILP-----GPDGGS--IGKINVKFHTKGDV--LSETVR-DQAKFKGLGL 141 (155)
T ss_dssp EEEGGGTEEEEEEEEETTSCTTEEEEEEEEEEEE-----CGGGCE--EEEEEEEEEESSSS--CCHHHH-TTHHHHHHHH
T ss_pred EEeccCCEEEEEEEecCCCccceEEEEEEEEEEe-----cCCCCE--EEEEEEEEEECCCC--CCHHHH-HHHHHHHHHH
Confidence 3444444444444433443334444455556674 323456 46677778765311 111111 1224555555
Q ss_pred HHHHHhhc
Q 003874 178 ANLLAQNL 185 (790)
Q Consensus 178 ~~~l~~~~ 185 (790)
.+.+..++
T Consensus 142 ~k~ie~yl 149 (155)
T 1icx_A 142 FKAIEGYV 149 (155)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 55555554
No 78
>3hhm_A Phosphatidylinositol-4,5-bisphosphate 3-kinase catalytic subunit alpha isoform; PI3KCA, PI3K, PIK3R1, phosphatidilynositol 3,4,5- triphosphate, wortmannin, H1047R, ATP-binding, disease mutation, kinase; HET: KWT; 2.80A {Homo sapiens} PDB: 3hiz_A 2rd0_A 4a55_A* 2enq_A
Probab=63.96 E-value=28 Score=42.72 Aligned_cols=90 Identities=14% Similarity=0.282 Sum_probs=59.2
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCe----EeeeecccCCCCCeEeeEEEEEeec---CCCCeEEEEEEe
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC--NGK----TRTSSVQLQTCDPQWHDILEFDAME---EPPSVLDVEVFD 371 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l--~~~----~~kT~v~~~tlnP~WnE~f~f~v~~---~~~~~L~v~V~D 371 (790)
...++|+|+.+.++.... ....+-||.+.+ |++ ..+|+.+. ..+|.|||.+.|++.- +....|.|+||+
T Consensus 354 ~~~f~v~i~~~~~~n~~~-~~~~~~~V~~~l~hG~~~L~~~~~T~~~~-~~~~~Wne~l~f~i~i~dLPr~arL~~tl~~ 431 (1091)
T 3hhm_A 354 NSALRIKILCATYVNVNI-RDIDKIYVRTGIYHGGEPLCDNVNTQRVP-CSNPRWNEWLNYDIYIPDLPRAARLCLSICS 431 (1091)
T ss_dssp CSEEEEEEEEESCCCCCC-SSCCCCCEEEEEESSSCSSCCEECCCCCC-TTSCEEEEEEEEEEEGGGCCTTCEEEEEECC
T ss_pred CCCEEEEEEEecCCCCCc-cccceEEEEEEEEECCEEccCceeccccC-CCCCCCCeeEEecCccccCChhcEEEEEEEE
Confidence 458999999998886432 334677888776 433 33444333 4578899999998743 346789999998
Q ss_pred eCCCC---CCCCccccEEEeceec
Q 003874 372 FDGPF---DQATSLGHAEINFLKH 392 (790)
Q Consensus 372 ~d~~~---~~dd~LG~~~i~L~~l 392 (790)
...+- .....||.+.++|-+.
T Consensus 432 ~~~~~~~~~~~~~lg~~n~~lfd~ 455 (1091)
T 3hhm_A 432 VKGRKGAKEEHCPLAWGNINLFDY 455 (1091)
T ss_dssp CCCCC-------CCEEEEEESBCT
T ss_pred ecCccCcccccceeEEeeeeeEcc
Confidence 66411 1234688888877553
No 79
>1tw0_A Pathogenesis-related class 10 protein SPE-16; seven antiparallel beta-sheet, plant protein; 2.20A {Pachyrhizus erosus} SCOP: d.129.3.1 PDB: 1txc_A*
Probab=63.26 E-value=28 Score=32.47 Aligned_cols=117 Identities=12% Similarity=0.051 Sum_probs=64.8
Q ss_pred eEEeeEEecCccccccccc-CCCchhHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEEE
Q 003874 19 ILLDQLYQVSPCDLNTFLF-APDSQFRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTYL 97 (790)
Q Consensus 19 ~~~~~~~~~~~~~l~~llf-~~~s~f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~~ 97 (790)
+-...+.++|++++|.++- .-+.-+-+.+ ..=+..++..++| ... -.|.++|. . ..++ ..+.|. +.
T Consensus 5 ~~~e~~i~a~a~kvw~~~~~d~~~~~pk~~-~~i~s~~i~eG~g--~~G----sir~~~~~-~-G~~~--~~~kEr--l~ 71 (157)
T 1tw0_A 5 FRDETSSSVAPAKLYKALTKDSDTIAQKID-GPIQSIELVEGNG--GVG----TIKKITAN-E-GDKT--SFVLQK--VD 71 (157)
T ss_dssp EEEEEEESSCHHHHHHHHHHTGGGGGGGSC-SSEEEEEEEESSS--STT----CEEEEEEE-E-TTEE--EEEEEE--EE
T ss_pred EEEEEEecCCHHHHHHHHhcCcchhhhhHH-hhccEEEEEeCCC--CCC----eEEEEEee-C-CCcc--ceEEEE--EE
Confidence 4456788999999999876 3221233444 4445555667776 212 27999997 2 2222 223444 33
Q ss_pred eeCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeee
Q 003874 98 KANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQS 155 (790)
Q Consensus 98 ~~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~ 155 (790)
..|.....+.-++.=-|+.-.+.=+....+.+.| .+++.| .|.|.++|...
T Consensus 72 ~~D~~~~~~~y~iieGd~~~~~~~~~~~~~~v~~-----~~~~gs--~v~w~~~y~~~ 122 (157)
T 1tw0_A 72 AIDEANLGYDYSIVGGTGLPESLEKLSFETKVVA-----GSGGGS--ISKVTLKFHTK 122 (157)
T ss_dssp EEETTTTEEEEEEEECTTSCTTEEEEEEEEEEEE-----CSSSSE--EEEEEEEEEES
T ss_pred EEeccCCEEEEEEEecCCCccceEEEEEEEEEEe-----cCCCCE--EEEEEEEEEEC
Confidence 4444555555455544544334444455566774 333456 46677778765
No 80
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=62.57 E-value=78 Score=29.13 Aligned_cols=142 Identities=8% Similarity=0.036 Sum_probs=70.3
Q ss_pred eeccccCCCHHHHhhhccCchHHHHHHHHcCCcc-eeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCC
Q 003874 621 VYNAELPISVKALMEMFDGGKLEHQVMEKSGCHN-YVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 699 (790)
Q Consensus 621 v~~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d-~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~ 699 (790)
.++..|++|++.+|+.|.+.+...+++--.+.+- ....++. .|+. +.|.... +-|... ..-.+......
T Consensus 11 ~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~~---~Gg~---~~~~~~~---~~G~~~-~~g~v~e~~p~ 80 (164)
T 2l9p_A 11 IFTRTFSAPINKVFDAYTKRELFEQWFHPQDASVTVYDFNAT---KGGS---AFYAIQA---PQMISY-TIAEYLQVDAP 80 (164)
T ss_dssp EECCEESSCHHHHHHHHHCHHHHTTTCCCTTCEEEEEECCCS---TTEE---EEEEEEE---TTEEEE-EEEEESCCBTT
T ss_pred EEEEEeCCCHHHHHHHhCCHHHHHhccCCCCceeeEEEEecc---CCCE---EEEEEEC---CCCCEE-EEEEEEEEcCC
Confidence 4556789999999999988876666642112110 1111222 3432 4444211 222222 22234555666
Q ss_pred CcEEEEEEEec-CCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHH
Q 003874 700 EGWIVNEVMSL-HDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVE 777 (790)
Q Consensus 700 ~~~vv~~~~t~-~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~ 777 (790)
..++..-.... .+.|-++-......|.|+..+ ++|+|.+... |...--....++.+...|....+..|-.+++
T Consensus 81 ~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~---~gT~l~~~~~--~~~~~~~~~~~~~~~~~Gw~~~L~~L~~~le 154 (164)
T 2l9p_A 81 YYIEYLDYFATSKGEKDTSMPGMHITLNFEEVK---GKTTVTSTST--FPTESAAQQAIDMGVETGMNSTLNQLEKLLN 154 (164)
T ss_dssp TEEEEEEEEEBTTBSCCSSSCCEEEEEEECCCS---SSEEEEEEEE--CSSTTHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEecCCCCCccCCCCceEEEEEEEECC---CCEEEEEEEE--cCCHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 66766644331 234532212245667776654 5888888754 4322112333443444455544444444443
No 81
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=62.01 E-value=15 Score=36.11 Aligned_cols=118 Identities=14% Similarity=0.152 Sum_probs=65.6
Q ss_pred CCCceEEeeEEecCcccccccccCCCc-hhH-HHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEE
Q 003874 15 LQGGILLDQLYQVSPCDLNTFLFAPDS-QFR-KDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATE 92 (790)
Q Consensus 15 ~~g~~~~~~~~~~~~~~l~~llf~~~s-~f~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e 92 (790)
+.|.+-.+..+++|++++|.++.+++. ..+ +++-..-+..++. ++|. .+ -.|.++|.-+ .+. ..+.|
T Consensus 27 ~~g~~~~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-GdGg--~G----sIR~lt~~~G--~~~--~~vkE 95 (201)
T 2vq5_A 27 VTKVIHHELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GDGG--VG----TILDMTFVPG--EFP--HEYKE 95 (201)
T ss_dssp EEEEEEEEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SSSS--TT----CEEEEECCTT--CSS--CEEEE
T ss_pred cceEEEEEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cCCC--CC----eEEEEEecCC--Ccc--cEEEE
Confidence 557788889999999999999654233 333 4444444666777 8862 22 3788998622 222 23333
Q ss_pred EEEEEeeCCceEEEEEeeeCCC---CCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeee
Q 003874 93 QQTYLKANGQEFAILVTVSTPD---VPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQS 155 (790)
Q Consensus 93 ~q~~~~~~~~~~~v~~~~~tpd---VP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~ 155 (790)
. +...|.....+.-++.=-| -||-+ |... ..+.| .+++.|. |.|.++|...
T Consensus 96 r--le~iDde~~~~sYsiieGd~l~~~~~~-y~~t--ikv~p-----~~dggs~--vkWt~~ye~~ 149 (201)
T 2vq5_A 96 K--FILVDNEHRLKKVQMIEGGYLDLGVTY-YMDT--IHVVP-----TGKDSCV--IKSSTEYHVK 149 (201)
T ss_dssp E--EEEEETTTTEEEEEEEEEGGGGTTEEE-EEEE--EEEEE-----EETTEEE--EEEEEEEEEC
T ss_pred E--EEEEchhhCEEEEEEEecCccccceeE-EEEE--EEEEE-----CCCCCeE--EEEEEEEEEC
Confidence 3 3344444444443333223 24433 3333 34453 3335664 7788888764
No 82
>3p0l_A Steroidogenic acute regulatory protein, mitochond; structural genomics consortium, SGC, start domain, cholester transport, cholesterol; 3.40A {Homo sapiens}
Probab=60.59 E-value=30 Score=33.97 Aligned_cols=144 Identities=8% Similarity=0.039 Sum_probs=73.6
Q ss_pred cccCCCHHHHhh-hccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEeccc--ccCCCceeceEEEEeecCCCC
Q 003874 624 AELPISVKALME-MFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRH--VSIFGGEVTCTQQKSPLASGE 700 (790)
Q Consensus 624 ~~~p~s~~~lf~-lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~--i~~~~~~vt~~Q~~~~~~~~~ 700 (790)
.+++++++.+|+ |+.|.+...++.... .+..+= +.. +... .+.|...++ ..|..+.=.....+.... +.
T Consensus 61 ~~v~~~~~~v~~~l~~d~~~r~~Wd~~~--~~~~vl--e~~--~~~t-~I~y~~~~~~~~~~v~~RDfv~~r~~~~~-~~ 132 (221)
T 3p0l_A 61 VVVDQPMERLYEELVERMEAMGEWNPNV--KEIKVL--QKI--GKDT-FITHELAAEAAGNLVGPRDFVSVRCAKRR-GS 132 (221)
T ss_dssp EEESSCHHHHHHHHTTTGGGTTTSCTTC--SEEEEE--EEC--SSSE-EEEEEEECC---CCSCCEEEEEEEEEEEC-SS
T ss_pred EEEcCCHHHHHHHHHhccchhhhcCcch--heEEEE--Eec--CCCe-EEEEEeeccccCCccCCceEEEEEEEEEc-CC
Confidence 467999999999 666544322221111 111110 011 1123 355554222 233222211122222223 34
Q ss_pred cEEEE-EEEecCCCCCCC-ceEEE---EEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHH
Q 003874 701 GWIVN-EVMSLHDVPFDD-HFRVH---FRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIEL 775 (790)
Q Consensus 701 ~~vv~-~~~t~~dVPygd-~F~v~---~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~ 775 (790)
.+++- .....+.+|-.. +-+++ ..|.|++.+.++++|++.....++..++ .=+..+.+.+.+++-+.++.|-+.
T Consensus 133 ~~vi~~~Sv~~~~~P~~~g~VR~~~~~~g~~i~p~~~~~~~t~vt~~~~~Dp~G~-iP~~lvn~~~~~~~~~~~~~Lr~~ 211 (221)
T 3p0l_A 133 TCVLAGMATDFGNMPEQKGVIRAEHGPTCMVLHPLAGSPSKTKLTWLLSIDLKGW-LPKSIINQVLSQTQVDFANHLRKR 211 (221)
T ss_dssp CEEECCEECCCTTSCCCTTSEECEECSCEEEEEEETTEEEEEEEEEEECEECCSS-CCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEEEeccCCCCCCCCCeEEEeccceEEEEEECCCCCCcEEEEEEEEecCCCC-CCHHHHHHHHHHHHHHHHHHHHHH
Confidence 55544 444457778744 44444 5799999874445899999999998765 335556665555555555444433
Q ss_pred H
Q 003874 776 V 776 (790)
Q Consensus 776 ~ 776 (790)
+
T Consensus 212 ~ 212 (221)
T 3p0l_A 212 L 212 (221)
T ss_dssp T
T ss_pred H
Confidence 3
No 83
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=59.97 E-value=20 Score=33.83 Aligned_cols=148 Identities=16% Similarity=0.189 Sum_probs=81.3
Q ss_pred CCCCceEEeeEEecCcccccccccCCCchhHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEE
Q 003874 14 NLQGGILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQ 93 (790)
Q Consensus 14 ~~~g~~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~ 93 (790)
.+.|.+....++++|++++|+++-+....+-+++-+.-+..++..++|- .. | -.|.++|.-. . +...+.|.
T Consensus 14 ~~~~k~~~ev~i~apa~kvw~~~~~d~~~lpk~~P~~i~s~~~~eGd~g-g~-G---sir~~~~~~g--g--~~~~~kEr 84 (166)
T 2i9y_A 14 SLVGKLETDVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWG-TV-G---SIVFWNYVHD--G--EAKVAKER 84 (166)
T ss_dssp SSEEEEEEEEEESSCHHHHHGGGSSCSSCCCCSCSSCCSSCCCCSCCSC-ST-T---CCCEEEEEET--T--EEEEEEEE
T ss_pred CCccEEEEEEEecCCHHHHHHHHhcccccccccccccceEEEEEcCCCC-CC-C---eEEEEEEecC--C--CceEEEEE
Confidence 3889999999999999999999765222222333223345566667772 21 2 3688888642 1 22334444
Q ss_pred EEEEeeCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeee-eeeeeeeccccccHHH
Q 003874 94 QTYLKANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQST-MMRGMIEGGARQGLKE 172 (790)
Q Consensus 94 q~~~~~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~-~~K~~Ie~~~~~G~~~ 172 (790)
. ...|.....+.-++.--|++ .++=+....+.+.|.++ .+.|+ |.|.++|.... ..-.. ..+.+
T Consensus 85 l--~~iD~~~~~~~y~iieGd~~-~~~~~~~~ti~v~p~~~----g~gs~--v~wt~~ye~~~~~~~~p------~~~~~ 149 (166)
T 2i9y_A 85 I--EAVEPDKNLITFRVIEGDLM-KEYKSFLLTIQVTPKPG----GPGSI--VHWHLEYEKISEEVAHP------ETLLQ 149 (166)
T ss_dssp E--EEEETTTTEEEEEECCTTGG-GTEEEEEEEEEEEEEEE----TTEEE--EEEEEEEEESSTTTCCT------HHHHH
T ss_pred E--EEEeccCcEEEEEEEeCCCC-CCeeEEEEEEEEEECCC----CCCcE--EEEEEEEEECCCCCCCH------HHHHH
Confidence 3 34455555555555555552 22334455556674221 24564 67777887642 22211 23445
Q ss_pred HHHHHHHHHHhhc
Q 003874 173 SFEQFANLLAQNL 185 (790)
Q Consensus 173 ~~~~~~~~l~~~~ 185 (790)
.+..+.+.+.+++
T Consensus 150 ~~~~~~k~ie~~l 162 (166)
T 2i9y_A 150 FCVEVSKEIDEHL 162 (166)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5555555555544
No 84
>3uid_A Putative uncharacterized protein; SRPBCC superfamily, beta sandwich, function, structural genomics, TB structural genomics conso TBSGC; 1.57A {Mycobacterium smegmatis} SCOP: d.129.3.0
Probab=59.00 E-value=1.2e+02 Score=28.31 Aligned_cols=143 Identities=10% Similarity=0.111 Sum_probs=74.0
Q ss_pred ceeccccCCCHHHHhhhccCchHHHHHHHHcCCc-ceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCC
Q 003874 620 KVYNAELPISVKALMEMFDGGKLEHQVMEKSGCH-NYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLAS 698 (790)
Q Consensus 620 ~v~~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~-d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~ 698 (790)
-+++..|++|++.+|+.|.+.+...++.--.+.. .....+|. .|+. +.|.+. ++-|......-++.....
T Consensus 15 i~~~r~i~Ap~e~Vw~a~Tdpe~l~~W~~p~~~~~~~~~~d~r---~GG~---~~~~~~---~~~G~~~~~~g~~~ev~p 85 (168)
T 3uid_A 15 LTITAEFAAPVTRIWQIYADPRQLEKVWGPPSHPATVVDHDLR---PGGR---VTYFMT---GPDGEKYAGYWEITAVDE 85 (168)
T ss_dssp EEEEEEESSCHHHHHHHHHSHHHHHHHHCCTTSCCEEEEECCS---TTCE---EEEEEE---CTTSCEEEEEEEEEEEET
T ss_pred EEEEEEEcCCHHHHHHHhCCHHHHhhEeCCCCeeeeEEEEccc---CCcE---EEEEEE---CCCCCEEeeEEEEEEEeC
Confidence 3456778999999999999998877776322211 01122332 2332 334421 222333222223444455
Q ss_pred CCcEEEEEEEe-cCCCCCCC-ceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHH
Q 003874 699 GEGWIVNEVMS-LHDVPFDD-HFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELV 776 (790)
Q Consensus 699 ~~~~vv~~~~t-~~dVPygd-~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~ 776 (790)
...++..-... ..+.|.++ . .....|.|+..+ ++|+|.+.. .|....-.+.+++. |+.+-+...++.|
T Consensus 86 ~~rlv~t~~~~~~~g~p~~~~~-~s~vt~~l~~~~---~gT~lt~~~--~~~~~~~~~~~~~~----g~~~GW~~~L~~L 155 (168)
T 3uid_A 86 PHSFSFLDGFADEDFNPNTDLP-VSTNVYTFTEHD---GGTRATYVG--TYASAEALQQVLDM----GVIEGASSAINQI 155 (168)
T ss_dssp TTEEEEEEEEECTTSCBCSSCC-CEEEEEEEEEET---TEEEEEEEE--ECSCHHHHHHHHHT----THHHHHHHHHHHH
T ss_pred CcEEEEEEeeccCCCCcCCCCC-cEEEEEEEEECC---CCEEEEEEE--ecCCHHHHHHHHHh----cHHHHHHHHHHHH
Confidence 56666554332 13445431 1 245667787766 689999874 34321112333333 3455555555556
Q ss_pred HHHHH
Q 003874 777 EREIL 781 (790)
Q Consensus 777 ~k~v~ 781 (790)
++.+.
T Consensus 156 ~~~l~ 160 (168)
T 3uid_A 156 DALLT 160 (168)
T ss_dssp HHHTC
T ss_pred HHHHH
Confidence 55554
No 85
>2vjg_A Major allergen DAU C 1; major carrot allergen, pathogenesis-related protein, plant defense; HET: P4C PG4 PGE; 2.70A {Daucus carota} PDB: 2wql_A* 2bk0_A
Probab=58.17 E-value=73 Score=29.58 Aligned_cols=118 Identities=15% Similarity=0.109 Sum_probs=65.5
Q ss_pred CceEEeeEEecCcccccccccCCCchhH--HHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEE
Q 003874 17 GGILLDQLYQVSPCDLNTFLFAPDSQFR--KDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQ 94 (790)
Q Consensus 17 g~~~~~~~~~~~~~~l~~llf~~~s~f~--~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q 94 (790)
|.+-.+-..++|++++|.+++. +..-+ +++-..-+..++ .+++. . --.|.++|.-. .+. ..+.|.
T Consensus 4 ~~~~~ei~i~a~a~kvw~~~v~-d~~~l~pk~~P~~v~s~e~-eGdg~--~----Gsir~~~~~~g--~~~--~~~kEr- 70 (154)
T 2vjg_A 4 QSHSLEITSSVSAEKIFSGIVL-DVDTVIPKAATGAYKSVEV-KGDGG--A----GTVRIITLPEG--SPI--TTMTVR- 70 (154)
T ss_dssp CEEEEEEEESSCHHHHHHHHTT-THHHHHHHHSTTTCSEEEE-ESSSS--T----TCEEEEECCTT--CSC--CEEEEE-
T ss_pred eEEEEEEEecCCHHHHHHhhhC-CccccchhhccCceeEEEE-eCCCC--C----ceEEEEEecCC--CCc--eEEEEE-
Confidence 4455677899999999999776 44322 344344566677 77642 1 23799998522 222 233344
Q ss_pred EEEeeCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeee
Q 003874 95 TYLKANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQS 155 (790)
Q Consensus 95 ~~~~~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~ 155 (790)
+...|.....+.-++.--|++-.++=+....+.+.| .++..|. |.|..+|.+.
T Consensus 71 -l~~iD~~~~~~~y~iiegd~l~~~~~~~~~ti~v~p-----~~~ggs~--v~wt~~y~~~ 123 (154)
T 2vjg_A 71 -TDAVNKEALSYDSTVIDGDILLGFIESIETHMVVVP-----TADGGSI--TKTTAIFHTK 123 (154)
T ss_dssp -EEEEETTTTEEEEEEEESGGGTTTEEEEEEEEEEEE-----CTTSCEE--EEEEEEEEES
T ss_pred -EEEEeccCCEEEEEEEecCCCccceEEEEEEEEEEE-----CCCCcEE--EEEEEEEEEC
Confidence 334444444444444444554322333344455674 3334564 6777777764
No 86
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=57.23 E-value=1e+02 Score=28.55 Aligned_cols=137 Identities=8% Similarity=0.018 Sum_probs=70.4
Q ss_pred ccccCCCHHHHhhhc-cCch-HHHHHHH-HcCCcceeecCcccCCCCceEEEEEEEeccccc-CCCceeceEEEEeecCC
Q 003874 623 NAELPISVKALMEMF-DGGK-LEHQVME-KSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVS-IFGGEVTCTQQKSPLAS 698 (790)
Q Consensus 623 ~~~~p~s~~~lf~lF-~~~~-f~~~~~~-~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~-~~~~~vt~~Q~~~~~~~ 698 (790)
+.+++++++.+|.+| .|.. +..+++- .-...++..+.|. -+..|.++|. -| .. ..+.+.- ....+
T Consensus 8 e~~i~a~a~kvw~~~v~d~~~l~pk~~P~~i~s~~~~eGdgg----~Gsvr~~~~~----~g~~~-~~~kErl--~~iD~ 76 (155)
T 2flh_A 8 QTELSVRLEALWAVLSKDFITVVPKVLPHIVKDVQLIEGDGG----VGTILIFNFL----PEVSP-SYQREEI--TEFDE 76 (155)
T ss_dssp EEEESSCHHHHHHHHHTSCTTHHHHHCTTTEEEEEEEECSSS----TTCEEEEEEC----TTSSS-CEEEEEE--EEEET
T ss_pred EEEecCCHHHHHHHHhcccccccchhccccceEEEEEcCCCC----CCeEEEEEee----CCCCC-cEEEEEE--EEEeC
Confidence 346799999999975 6544 5577763 2222234456652 2679999996 12 11 2222222 22223
Q ss_pred CCcEEEEEEEecCC---CCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHH--HHHHHHH
Q 003874 699 GEGWIVNEVMSLHD---VPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFT--HRLKEMI 773 (790)
Q Consensus 699 ~~~~vv~~~~t~~d---VPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~--~~~k~~~ 773 (790)
.+..+--++.- -| -||.+ ....+.+.+.+ .++| .|.+.++|.+..=..- -....+ +.+..++
T Consensus 77 ~~~~~~y~iie-g~~l~~~~~~---~~~~i~v~p~~--~ggs--~v~wt~~y~~~~~~~~-----~~~~~~~~~~~~~~~ 143 (155)
T 2flh_A 77 SSHEIGLQVIE-GGYLSQGLSY---YKTTFKLSEIE--EDKT--LVNVKISYDHDSDIEE-----KVTPTKTSQSTLMYL 143 (155)
T ss_dssp TTTEEEEEEEE-EGGGGTTCSE---EEEEEEEEEEE--TTEE--EEEEEEEEEC------------CCHHHHHHHHHHHH
T ss_pred CCCEEEEEEEe-ccccccCceE---EEEEEEEEECC--CCCE--EEEEEEEEEECCCCcc-----ChhHhhhHHHHHHHH
Confidence 33322112222 22 25655 34445556654 3566 4556667765431111 123345 7788888
Q ss_pred HHHHHHHHhc
Q 003874 774 ELVEREILFA 783 (790)
Q Consensus 774 ~~~~k~v~~~ 783 (790)
+.++.++..+
T Consensus 144 k~ie~yll~~ 153 (155)
T 2flh_A 144 RRLERYLSNG 153 (155)
T ss_dssp HHHHHHHC--
T ss_pred HHHHHHHhhC
Confidence 9999888654
No 87
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=56.64 E-value=1.3e+02 Score=28.05 Aligned_cols=144 Identities=11% Similarity=0.075 Sum_probs=73.0
Q ss_pred ceeccccCCCHHHHhhhccCchHHHHHHHHcCCcc-eeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCC
Q 003874 620 KVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHN-YVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLAS 698 (790)
Q Consensus 620 ~v~~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d-~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~ 698 (790)
-.++..|+++++.+|+.|.+.+...+++--.+.+- ....++. .|+. +.|.... +.|......-.+.....
T Consensus 18 i~~~~~i~Ap~e~Vw~a~tdpe~~~~W~~p~~~~~~~~~~d~~---~Gg~---~~~~~~~---~~G~~~~~~g~v~e~~p 88 (175)
T 2lf2_A 18 ITIKREFAAVRAIVWEAFTRAEILDQWWAPKPWKAKTKSMDFK---EGGT---WLYAMVG---PNGEEHWSICEYAIIKP 88 (175)
T ss_dssp EEEEEEESSCHHHHHHHHTCHHHHHHSSSSSSSEEEEEEECCS---TTCE---EEEEEEC---SSSCEEEEEEEECCCCS
T ss_pred EEEEEEEcCCHHHHHHHhCCHHHHhhCcCCCCccceEEEEecc---CCCE---EEEEEEC---CCCCEEEeEEEEEEEcC
Confidence 34556789999999999999887777752222210 1112232 3332 4444212 22333322223445566
Q ss_pred CCcEEEEEEEe-cCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHH
Q 003874 699 GEGWIVNEVMS-LHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVE 777 (790)
Q Consensus 699 ~~~~vv~~~~t-~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~ 777 (790)
...++..-... ..+.|-++-......|.|+..+ .+|+|.+... |...-.....+..+..+|....+..|-.+++
T Consensus 89 ~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~~~~---~gT~l~~~~~--~~~~~~~~~~~~~~~~~Gw~~~L~~L~~~le 163 (175)
T 2lf2_A 89 IERFTGKDGFTDASGKLNTEMPRSNWDMRFIDKG---EITEVQYHIS--YDDVAQLEATIQMGFKEGITMAMENLDELLV 163 (175)
T ss_dssp SSEEEEEEEEESSTTCCCTTSCCEEEEEEEEEET---TEEEEEEEEE--CSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEEecCCCCCcCCCCCcEEEEEEEEECC---CCEEEEEEEe--cCCHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 66666654332 1234533212356678888766 5788887754 3211112334434444455554444444443
No 88
>1e7u_A Phosphatidylinositol 3-kinase catalytic subunit; phosphoinositide 3-kinase gamma, secondary messenger generation, PI3K, PI 3K, wortmannin; HET: KWT; 2.0A {Sus scrofa} SCOP: a.118.1.6 b.7.1.1 d.15.1.5 d.144.1.4 PDB: 1e8x_A* 1e8w_A* 1e7v_A* 1e90_A* 3l54_A* 3s2a_A* 3qaq_A* 3qjz_A* 3qk0_A* 3qar_A* 3apc_A* 3apd_A* 3apf_A* 3dbs_A* 3l13_A* 3r7q_A* 3cst_A* 3csf_A* 3l16_A* 3l17_A* ...
Probab=55.38 E-value=45 Score=40.55 Aligned_cols=72 Identities=15% Similarity=0.088 Sum_probs=46.9
Q ss_pred eEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCeE---eeeecccCCCCCeEeeEEEEEeec---CCCCeEEEEEEeeC
Q 003874 302 WVLTVALVEGVNLASSEMTGLSDPYVVFTC--NGKT---RTSSVQLQTCDPQWHDILEFDAME---EPPSVLDVEVFDFD 373 (790)
Q Consensus 302 g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l--~~~~---~kT~v~~~tlnP~WnE~f~f~v~~---~~~~~L~v~V~D~d 373 (790)
..++|.|+.+......+ +..++-||.+.+ |++. .+|..+.-+.+|.|||.+.|++.- +....|.++||+..
T Consensus 218 ~~f~i~i~~~~~~~~~~-~~~~~~~V~~~l~~G~~~l~~~~t~~~~~~~~~~Wne~l~f~i~i~dLPr~a~L~~ti~~~~ 296 (961)
T 1e7u_A 218 RKFRVKIRGIDIPVLPR-TADLTVFVEANIQYGQQVLCQRRTSPKPFTEEVLWNVWLEFSIKIKDLPKGALLNLQIYCGA 296 (961)
T ss_dssp SEEEEEEEEEECSSCCT-TSCEEEEEEEEEEETTEEEEEEECCCEECCSEEEEEEEEEEEEEGGGCCTTCEEEEEEEEEE
T ss_pred CceEEEEeecccccccC-CCCceEEEEEEEEECCEEcccceeeccccCCCcccceeEEeccccccCCcccEEEEEEEecc
Confidence 47899999886522111 224567777654 5442 244444446679999999998643 34678999999865
Q ss_pred C
Q 003874 374 G 374 (790)
Q Consensus 374 ~ 374 (790)
.
T Consensus 297 ~ 297 (961)
T 1e7u_A 297 K 297 (961)
T ss_dssp C
T ss_pred c
Confidence 4
No 89
>1e09_A PRU AV 1; allergen, major cherry allergen, pathogenesis-related protein, heteronuclear structure; NMR {Prunus avium} SCOP: d.129.3.1 PDB: 1h2o_A 2lpx_A
Probab=54.31 E-value=62 Score=30.10 Aligned_cols=114 Identities=13% Similarity=0.164 Sum_probs=64.3
Q ss_pred eEEeeEEecCcccccccccCCCch-hHHHHHH-HhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEE
Q 003874 19 ILLDQLYQVSPCDLNTFLFAPDSQ-FRKDLAE-LQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTY 96 (790)
Q Consensus 19 ~~~~~~~~~~~~~l~~llf~~~s~-f~~~~~~-~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~ 96 (790)
+-...++++|++++|.++-. +.. .+..++- .-+..++..++| ... -.|.++|. + ..+++ .+.| .+
T Consensus 5 ~~~e~~i~ap~~~vw~~~~~-d~~~~~pk~~P~~i~s~~~~eGdg--g~G----svr~~~~~-~-G~~~~--~~kE--rl 71 (159)
T 1e09_A 5 YESEFTSEIPPPRLFKAFVL-DADNLVPKIAPQAIKHSEILEGDG--GPG----TIKKITFG-E-GSQYG--YVKH--KI 71 (159)
T ss_dssp EEEEEEESSCHHHHHHHHTT-THHHHHHHHCTTTEEEEEEEESSS--STT----CEEEEEEC-C-SSSCE--EEEE--EE
T ss_pred EEEEEEecCCHHHHHHHHhc-CccccchhhChhhccEEEEEeCCC--CCc----eEEEEEec-C-CCCce--EEEE--EE
Confidence 45667899999999999764 333 3344443 335556667877 212 27889996 2 22222 2333 34
Q ss_pred EeeCCceEEEEEeeeCCCC---CCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeee
Q 003874 97 LKANGQEFAILVTVSTPDV---PYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQS 155 (790)
Q Consensus 97 ~~~~~~~~~v~~~~~tpdV---P~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~ 155 (790)
...|.....+.-++.=-|+ ||-+ ....+.+. +.+++.| +|.|.++|...
T Consensus 72 ~~~D~~~~~~~y~iieG~~~~~~~~~---~~~~~~v~-----~~~~~gs--~v~wt~~y~~~ 123 (159)
T 1e09_A 72 DSIDKENYSYSYTLIEGDALGDTLEK---ISYETKLV-----ASPSGGS--IIKSTSHYHTK 123 (159)
T ss_dssp EEEETTTTEEEEEECCCTTTGGGEEE---EEEEEEEC-----CCTTSSE--EEEEEEEEEEC
T ss_pred EEEcCCCCEEEEEEEecccCcccceE---EEEEEEEE-----ecCCCCE--EEEEEEEEEEC
Confidence 4455555555555554454 4432 23444566 3334556 46677777764
No 90
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=53.04 E-value=76 Score=29.62 Aligned_cols=115 Identities=11% Similarity=0.078 Sum_probs=64.0
Q ss_pred EeeEEecCcccccccccCCCchh-H-HHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEEEe
Q 003874 21 LDQLYQVSPCDLNTFLFAPDSQF-R-KDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTYLK 98 (790)
Q Consensus 21 ~~~~~~~~~~~l~~llf~~~s~f-~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~~~ 98 (790)
.+-..++|++++|.++.. +..- + +++-..=+..++..++|. .+. .|.++|.-.. +. ..+.|. +..
T Consensus 7 ~ei~i~a~a~kvw~~~~~-d~~~l~pk~~P~~i~s~e~~eGdgg--~Gs----ir~~~~~~g~--~~--~~~kEr--l~~ 73 (159)
T 4a8u_A 7 TEATSVIPAARLFKAFIL-DGDNLFPKVAPQAISSVENIEGNGG--PGT----IKKISFPEGF--PF--KYVKDR--VDE 73 (159)
T ss_dssp EEEEESSCHHHHHHHHTT-THHHHHHHHCTTTCCEEEEEECSSS--TTC----EEEEECCTTS--SC--SEEEEE--EEE
T ss_pred EEEEecCCHHHHHHHHhc-CccccchhhCchhccEEEEEcCCCC--Cce----EEEEEEecCC--Cc--cEEEEE--EEE
Confidence 345788999999999964 4332 3 333344466677788873 223 7999987332 22 233344 444
Q ss_pred eCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeee
Q 003874 99 ANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQS 155 (790)
Q Consensus 99 ~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~ 155 (790)
.|.....+.-++.--|++-.+.=+....+.+.| .++..|. |.|..+|.+.
T Consensus 74 iD~~~~~~~y~iiegd~l~~~~~~y~~ti~v~p-----~~~ggs~--v~wt~~y~~~ 123 (159)
T 4a8u_A 74 VDHTNFKYSYSVIEGGPVGDTLEKISNEIKIVA-----TPNGGSI--LKINNKYHTK 123 (159)
T ss_dssp EETTTTEEEEEEEEETTCBTTEEEEEEEEEEEE-----CTTSCEE--EEEEEEEEES
T ss_pred EccccCEEEEEEeeCCCCccceEEEEEEEEEEE-----CCCCceE--EEEEEEEEEC
Confidence 444443343344444554332333344455674 3345664 6777777764
No 91
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=52.79 E-value=31 Score=34.11 Aligned_cols=150 Identities=13% Similarity=0.041 Sum_probs=74.5
Q ss_pred CCCCCCceEEeeEEecCcccccccccCCCchhHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEE
Q 003874 12 PENLQGGILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKAT 91 (790)
Q Consensus 12 ~~~~~g~~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~ 91 (790)
|.+-+-...+-+++++|+++++.++ + +..-++.....=+..++..++|. + .--.|.+++.-.+ + ...+.
T Consensus 45 ~~~~~c~~~v~~~I~ApadkVW~lv-~-dF~~l~~w~p~V~s~e~~eGd~g----~-vGsVR~lt~~~G~--p--~~~vk 113 (211)
T 3k3k_A 45 LDPGSCSSLHAQRIHAPPELVWSIV-R-RFDKPQTYKHFIKSCSVEQNFEM----R-VGCTRDVIVISGL--P--ANTST 113 (211)
T ss_dssp CCTTEEEEEEEEEESSCHHHHHHHH-T-CTTCGGGTCSSEEEEECCTTCCC----C-TTCEEEEEESSSS--S--CEEEE
T ss_pred CCCCeEeEEEEEEEcCCHHHHHHHH-h-CcCChhHcCccceEEEEecCCCC----C-CCcEEEEEecCCC--c--cceEE
Confidence 4455566788899999999999975 3 22212211211123333333331 1 1247999874322 2 23445
Q ss_pred EEEEEEeeCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeee--eeeeeeecccccc
Q 003874 92 EQQTYLKANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQST--MMRGMIEGGARQG 169 (790)
Q Consensus 92 e~q~~~~~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~--~~K~~Ie~~~~~G 169 (790)
|+...++.+...|.- ++.-.|.|+-|+-.+.. +.| .++.. |.|..+|.+-. .-.|.=+..+..-
T Consensus 114 ErL~~lDd~~~~~sY--sIieg~lpv~~Y~sti~---V~p-----~~~gg----V~Wt~~fes~~~D~P~g~~~e~a~~~ 179 (211)
T 3k3k_A 114 ERLDILDDERRVTGF--SIIGGEHRLTNYKSVTT---VHR-----FEKEN----RIWTVVLESYVVDMPEGNSEDDTRMF 179 (211)
T ss_dssp EEEEEEETTTTEEEE--EEEEETTGGGTCEEEEE---EEE-----EEETT----EEEEEEEEEEEEECCSSSSSSCCHHH
T ss_pred EEEEEEeccCCEEEE--EEeecCcceeEEEEEEE---EEE-----CCCCC----EEEEEEEEEecCCCCCCCCHHHHHHH
Confidence 555555444444331 12224689987654433 342 22222 88999997311 1122222223233
Q ss_pred HHHHHHHHHHHHHhhcc
Q 003874 170 LKESFEQFANLLAQNLK 186 (790)
Q Consensus 170 ~~~~~~~~~~~l~~~~~ 186 (790)
+...|+.-.+.|++.+.
T Consensus 180 v~~iy~~gL~~L~~~~e 196 (211)
T 3k3k_A 180 ADTVVKLNLQKLATVAE 196 (211)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34445555555555544
No 92
>4a8u_A Major pollen allergen BET V 1-J; PR-10 protein; 1.16A {Betula pendula} PDB: 4a8v_A* 4a87_A* 4a81_A* 4a80_A* 4a83_A* 4a86_A* 4a85_A* 4a88_A 4a8g_A* 1b6f_A 1btv_A 1bv1_A 1fsk_A 4a84_A* 1llt_A 1fm4_A* 3k78_A 1qmr_A
Probab=50.84 E-value=1.6e+02 Score=27.40 Aligned_cols=143 Identities=11% Similarity=0.051 Sum_probs=75.3
Q ss_pred cccCCCHHHHhhhc-cCch-HHHHHHH-HcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCCC
Q 003874 624 AELPISVKALMEMF-DGGK-LEHQVME-KSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGE 700 (790)
Q Consensus 624 ~~~p~s~~~lf~lF-~~~~-f~~~~~~-~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~~ 700 (790)
.+++++++.+|.+| .|.. +..+++- .-...++..+.|. -+..|.++|. -+.+.. +..+ ++...|..
T Consensus 9 i~i~a~a~kvw~~~~~d~~~l~pk~~P~~i~s~e~~eGdgg----~Gsir~~~~~----~g~~~~--~~kE-rl~~iD~~ 77 (159)
T 4a8u_A 9 ATSVIPAARLFKAFILDGDNLFPKVAPQAISSVENIEGNGG----PGTIKKISFP----EGFPFK--YVKD-RVDEVDHT 77 (159)
T ss_dssp EEESSCHHHHHHHHTTTHHHHHHHHCTTTCCEEEEEECSSS----TTCEEEEECC----TTSSCS--EEEE-EEEEEETT
T ss_pred EEecCCHHHHHHHHhcCccccchhhCchhccEEEEEcCCCC----CceEEEEEEe----cCCCcc--EEEE-EEEEEccc
Confidence 46789999999966 4443 4566663 3334455667763 3679999997 222111 2222 33323333
Q ss_pred c-EEEEEEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHHHH
Q 003874 701 G-WIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 779 (790)
Q Consensus 701 ~-~vv~~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~k~ 779 (790)
. .+--++.- -|++-..+=.....+.+.+.+ ..+|. |.+..+|.+..=. .+.-......++....+++.++.+
T Consensus 78 ~~~~~y~iie-gd~l~~~~~~y~~ti~v~p~~--~ggs~--v~wt~~y~~~~~~--~~~~~~~k~~~~~~~~~~k~ie~y 150 (159)
T 4a8u_A 78 NFKYSYSVIE-GGPVGDTLEKISNEIKIVATP--NGGSI--LKINNKYHTKGDH--EVKAEQIKASKEMGETLLRAVESY 150 (159)
T ss_dssp TTEEEEEEEE-ETTCBTTEEEEEEEEEEEECT--TSCEE--EEEEEEEEESSSC--CC-CHHHHHHHHHHHHHHHHHHHH
T ss_pred cCEEEEEEee-CCCCccceEEEEEEEEEEECC--CCceE--EEEEEEEEECCCC--cCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3 22223333 343311122344456666655 45675 4555566643210 112222333467778889999999
Q ss_pred HHhcc
Q 003874 780 ILFAT 784 (790)
Q Consensus 780 v~~~~ 784 (790)
+..+-
T Consensus 151 ll~np 155 (159)
T 4a8u_A 151 LLAHS 155 (159)
T ss_dssp HHHCT
T ss_pred HhhCh
Confidence 88764
No 93
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=50.21 E-value=54 Score=28.79 Aligned_cols=54 Identities=20% Similarity=0.271 Sum_probs=39.1
Q ss_pred CCcccccceecccccccccCceEEEeccEEEEEeccCCCeEEEEEecccceeeEEccc
Q 003874 465 PEEFLIKDFTCYLKRKMPLQGRLFLSARIVGFYANLFGNKTKFFFLWEDIEDIQILSP 522 (790)
Q Consensus 465 ~~E~l~~~f~C~l~~~i~~~Grlyis~~~icF~s~~~g~~t~~~i~~~dI~~I~k~~~ 522 (790)
++|.|+-...-.+++. -|.||++..++.+..+-- ..-.+++++.||...+-.|.
T Consensus 5 ~~~~ll~v~~v~yKK~---dGtL~l~~d~i~W~p~~~-~~~~vs~~~~~I~~qq~SP~ 58 (108)
T 1pfj_A 5 SEEVLLIVKKVRQKKQ---DGALYLMAERIAWAPEGK-DRFTISHMYADIKCQKISPE 58 (108)
T ss_dssp SCCEEEEESCCBCSSC---BCEEEEETTEEEEECSSS-SSCSEEEETTTCCCEEECCS
T ss_pred chheeEEehhheeecC---CceEEEEcceEEEccCCC-CCceEEEehhhhhcceeCCC
Confidence 3455555555555442 299999999999887554 35567789999999888886
No 94
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=48.60 E-value=1.3e+02 Score=27.22 Aligned_cols=100 Identities=12% Similarity=0.110 Sum_probs=51.6
Q ss_pred cccCCCHHHHhhhccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCCCcEE
Q 003874 624 AELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGEGWI 703 (790)
Q Consensus 624 ~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~~~~v 703 (790)
.+++++++.+|.++.|-.-+.+++-. +....+.. |+..|.++|. . |..+.+. .....+.+..+
T Consensus 8 i~I~Ap~~~VW~~l~d~~~~~~w~p~-----v~~~~~~~---GG~vR~~~~~-----~--G~~~~Er--l~~~D~~~~~~ 70 (146)
T 3f08_A 8 MEIFGSTEQVWQLIGGFNSLPDWLPY-----IPSSKLTE---GGRVRHLANP-----D--GETIIER--LEVFNDKERYY 70 (146)
T ss_dssp EEESSCHHHHHHHHCSTTCHHHHCTT-----CCEEEEEG---GGTEEEEECT-----T--SCEEEEE--EEEEETTTTEE
T ss_pred EEEeCCHHHHHHHHhccccHHHhCCC-----eEEEEEeC---CCeEEEEEeC-----C--CCEEEEE--EEEEeCCCCEE
Confidence 46799999999977665544555432 12222222 3678887763 1 2222222 22222222222
Q ss_pred EEEEEecCCCCCCCceEEEEEEEEEe-cCCCCCccEEEEEEEEE
Q 003874 704 VNEVMSLHDVPFDDHFRVHFRYEIEK-SPLAHNACKCAIYIGIS 746 (790)
Q Consensus 704 v~~~~t~~dVPygd~F~v~~ry~i~~-~~~~~~~c~l~V~~~V~ 746 (790)
--++.. .+.|+.+ ....|.+++ .+ +++|++.-...++
T Consensus 71 ~y~iv~-g~~~~~~---~~~~~~v~p~~~--~~gt~v~w~~~~~ 108 (146)
T 3f08_A 71 TYSIMN-APFPVTN---YLSTIQVKEGTE--SNTSLVEWSGTFT 108 (146)
T ss_dssp EEEEEE-CSSSEEE---EEEEEEEEECSS--TTCEEEEEEEEEE
T ss_pred EEEEec-CCCceeE---EEEEEEEEEecC--CCcEEEEEEEEEE
Confidence 222222 3566532 445677777 33 4678776665555
No 95
>3f08_A Uncharacterized protein Q6HG14; NESG Q6HG14_bachk Q6HG14 BUR153, structural genomics, PSI-2; 2.20A {Bacillus thuringiensis serovar konkukiorganism_taxid} SCOP: d.129.3.8 PDB: 3cnw_A
Probab=46.69 E-value=1e+02 Score=27.97 Aligned_cols=137 Identities=10% Similarity=0.095 Sum_probs=71.6
Q ss_pred ceEEeeEEecCcccccccccCCCchhHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEEE
Q 003874 18 GILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTYL 97 (790)
Q Consensus 18 ~~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~~ 97 (790)
++-...++++|++++|++|=.. ..+-+++-..+++ ++..+ | ..|.+++. .. ....|.-..+
T Consensus 3 ~v~~si~I~Ap~~~VW~~l~d~-~~~~~w~p~v~~~-~~~~G-------G---~vR~~~~~---~G----~~~~Erl~~~ 63 (146)
T 3f08_A 3 HTTTSMEIFGSTEQVWQLIGGF-NSLPDWLPYIPSS-KLTEG-------G---RVRHLANP---DG----ETIIERLEVF 63 (146)
T ss_dssp EEEEEEEESSCHHHHHHHHCST-TCHHHHCTTCCEE-EEEGG-------G---TEEEEECT---TS----CEEEEEEEEE
T ss_pred EEEEEEEEeCCHHHHHHHHhcc-ccHHHhCCCeEEE-EEeCC-------C---eEEEEEeC---CC----CEEEEEEEEE
Confidence 3566788999999999965422 2233444333333 33211 2 26777762 11 1334443333
Q ss_pred eeCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHHHHHHHH
Q 003874 98 KANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKESFEQF 177 (790)
Q Consensus 98 ~~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~~~~~~~ 177 (790)
..+...|.- ++.-.+.|+. .| .-.|.+.|. .+++.|++. |...|.- -|+-+..+...++..|+.-
T Consensus 64 D~~~~~~~y--~iv~g~~~~~-~~--~~~~~v~p~----~~~~gt~v~--w~~~~~p----~g~~~~~~~~~~~~~~~~~ 128 (146)
T 3f08_A 64 NDKERYYTY--SIMNAPFPVT-NY--LSTIQVKEG----TESNTSLVE--WSGTFTP----VAVSDEEAINLVHGIYSDG 128 (146)
T ss_dssp ETTTTEEEE--EEEECSSSEE-EE--EEEEEEEEC----SSTTCEEEE--EEEEEEE----SSSCHHHHHHHHHHHHHHH
T ss_pred eCCCCEEEE--EEecCCCcee-EE--EEEEEEEEe----cCCCcEEEE--EEEEEEe----CCCCHHHHHHHHHHHHHHH
Confidence 333333332 1122366753 22 335666731 345678755 4555542 4444445566677777887
Q ss_pred HHHHHhhcccc
Q 003874 178 ANLLAQNLKIL 188 (790)
Q Consensus 178 ~~~l~~~~~~~ 188 (790)
.+.|++.+..+
T Consensus 129 L~~Lk~~~e~~ 139 (146)
T 3f08_A 129 LKALQHAFLDL 139 (146)
T ss_dssp HHHHHHHTTC-
T ss_pred HHHHHHHHhhh
Confidence 78888776544
No 96
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=46.49 E-value=91 Score=28.98 Aligned_cols=113 Identities=15% Similarity=0.117 Sum_probs=70.3
Q ss_pred eeEEecCcccccccccCCCch-hH-HHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEEEee
Q 003874 22 DQLYQVSPCDLNTFLFAPDSQ-FR-KDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTYLKA 99 (790)
Q Consensus 22 ~~~~~~~~~~l~~llf~~~s~-f~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~~~~ 99 (790)
.-..++|+++||..+.. |++ .+ +.+-..-++.++ .+++.. --.|.++|.-. .+.+. + .+.+...
T Consensus 9 E~~~~v~a~kl~ka~v~-d~~~l~Pk~~P~~iks~~v-eGdg~~------Gsir~~t~~~g--~~~~~--~--kErle~i 74 (154)
T 2wql_A 9 EITSSVSAEKIFSGIVL-DVDTVIPKAATGAYKSVEV-KGDGGA------GTVRIITLPEG--SPITT--M--TVRTDAV 74 (154)
T ss_dssp EEEESSCHHHHHHHHTT-THHHHHHHHSTTTCSEEEE-ESSSST------TCEEEEECCTT--CSCCE--E--EEEEEEE
T ss_pred EEEecCCHHHHHHHHhh-cccccchhhcccceeEEEE-ECCCCC------CeEEEEEEcCC--CCceE--E--EEEEEEE
Confidence 34578899999998876 544 33 555556666664 555421 23799998433 22322 2 3445556
Q ss_pred CCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeee
Q 003874 100 NGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQS 155 (790)
Q Consensus 100 ~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~ 155 (790)
|.....+.-++.=-|+.-..+=+......+.| .++..| .+.|.++|.+.
T Consensus 75 D~~~~~~~y~iieGd~l~~~~~~~~~~ikv~p-----~~~ggs--vvk~t~~Y~~~ 123 (154)
T 2wql_A 75 NKEALSYDSTVIDGDILLGFIESIETHMVVVP-----TADGGS--ITKTTAIFHTK 123 (154)
T ss_dssp ETTTTEEEEEEEESGGGTTTEEEEEEEEEEEE-----CTTSCE--EEEEEEEEEES
T ss_pred ehhhCEEEEEEEeccccccceEEEEEEEEEee-----CCCCcE--EEEEEEEEEEC
Confidence 66677777777777776555555566677784 444667 45677888775
No 97
>1zyi_A Methylosome subunit picln; PH domain, cell volume regulation, RNA splicing, translation; NMR {Canis lupus familiaris}
Probab=45.87 E-value=50 Score=31.46 Aligned_cols=57 Identities=12% Similarity=0.152 Sum_probs=40.5
Q ss_pred cccccccccCceEEEeccEEEEEeccCCCeEEEEEecccc--eeeEEccccccccCCCcEEEEEE
Q 003874 475 CYLKRKMPLQGRLFLSARIVGFYANLFGNKTKFFFLWEDI--EDIQILSPSLATVGSPSLVIILW 537 (790)
Q Consensus 475 C~l~~~i~~~Grlyis~~~icF~s~~~g~~t~~~i~~~dI--~~I~k~~~~~~~~~~~~i~i~l~ 537 (790)
+.+.....-.|.|||+.+.+.|.+. ....|.||+..| ..|.+.+ ..+..|||++-+.
T Consensus 34 ~vl~~~~~g~GtLyVt~~~l~W~~~---~~~G~sI~YpsIsLHAIsrd~---~~~p~~clY~Qld 92 (171)
T 1zyi_A 34 AVLNGKGLGTGTLYIAESRLSWLDG---SGLGFSLEYPTISLHAVSRDL---NAYPREHLYVMVN 92 (171)
T ss_dssp EEBTTBCCCEEEEEEETTEEEEEET---TTEEEEESSCCCSEEECCSSC---SSCCSCCEEEEEE
T ss_pred EEECCCccCceEEEEEcCEEEEEcC---CCcEEEeecCeEEEEEEecCC---CCCCCceEEEEEe
Confidence 3343333346999999999999887 367899999999 4455544 2345688888764
No 98
>3uid_A Putative uncharacterized protein; SRPBCC superfamily, beta sandwich, function, structural genomics, TB structural genomics conso TBSGC; 1.57A {Mycobacterium smegmatis} SCOP: d.129.3.0
Probab=45.62 E-value=73 Score=29.71 Aligned_cols=144 Identities=10% Similarity=0.118 Sum_probs=72.8
Q ss_pred ceEEeeEEecCcccccccccCCCchhHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEe-ecCCCceeeEEEEEEEE
Q 003874 18 GILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMK-AATKLVKAVKATEQQTY 96 (790)
Q Consensus 18 ~~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~-~~~~~~k~~~~~e~q~~ 96 (790)
.+.+..+|++|++++|+.+=.| -.+-+|+....-.......+++.+ | .+.|.. ...... ....-++
T Consensus 14 ~i~~~r~i~Ap~e~Vw~a~Tdp-e~l~~W~~p~~~~~~~~~~d~r~G--G------~~~~~~~~~~G~~----~~~~g~~ 80 (168)
T 3uid_A 14 TLTITAEFAAPVTRIWQIYADP-RQLEKVWGPPSHPATVVDHDLRPG--G------RVTYFMTGPDGEK----YAGYWEI 80 (168)
T ss_dssp EEEEEEEESSCHHHHHHHHHSH-HHHHHHHCCTTSCCEEEEECCSTT--C------EEEEEEECTTSCE----EEEEEEE
T ss_pred EEEEEEEEcCCHHHHHHHhCCH-HHHhhEeCCCCeeeeEEEEcccCC--c------EEEEEEECCCCCE----EeeEEEE
Confidence 4789999999999999998753 234566643211111223344322 3 233332 222211 1223345
Q ss_pred EeeCC-ceEEEEEeeeC-CCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHHHHH
Q 003874 97 LKANG-QEFAILVTVST-PDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKESF 174 (790)
Q Consensus 97 ~~~~~-~~~~v~~~~~t-pdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~~~~ 174 (790)
+..+. +..+..-.... .+.|.+.-=.....|-|. .. ++.|+|++.. .|....-...+++.|..+|....+
T Consensus 81 ~ev~p~~rlv~t~~~~~~~g~p~~~~~~s~vt~~l~-----~~-~~gT~lt~~~--~~~~~~~~~~~~~~g~~~GW~~~L 152 (168)
T 3uid_A 81 TAVDEPHSFSFLDGFADEDFNPNTDLPVSTNVYTFT-----EH-DGGTRATYVG--TYASAEALQQVLDMGVIEGASSAI 152 (168)
T ss_dssp EEEETTTEEEEEEEEECTTSCBCSSCCCEEEEEEEE-----EE-TTEEEEEEEE--ECSCHHHHHHHHHTTHHHHHHHHH
T ss_pred EEEeCCcEEEEEEeeccCCCCcCCCCCcEEEEEEEE-----EC-CCCEEEEEEE--ecCCHHHHHHHHHhcHHHHHHHHH
Confidence 55443 33333322221 224433100245667888 44 3689999974 343323344555556666766666
Q ss_pred HHHHHHHH
Q 003874 175 EQFANLLA 182 (790)
Q Consensus 175 ~~~~~~l~ 182 (790)
+.|..+|.
T Consensus 153 ~~L~~~l~ 160 (168)
T 3uid_A 153 NQIDALLT 160 (168)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHHH
Confidence 66655543
No 99
>2l9p_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Staphylococcus epidermidis}
Probab=45.37 E-value=43 Score=30.98 Aligned_cols=146 Identities=13% Similarity=0.128 Sum_probs=77.3
Q ss_pred CceEEeeEEecCcccccccccCCCchhHHHHHHHhCcc-ceeeCcCcccCCCCceeEEEEEEEe-ecCCCceeeEEEEEE
Q 003874 17 GGILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTK-DVQEGPWEWKSGEMTCLTRAVSYMK-AATKLVKAVKATEQQ 94 (790)
Q Consensus 17 g~~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~-~~~~~~w~~~~~~~~~~~R~~~y~~-~~~~~~k~~~~~e~q 94 (790)
-.|.+...|++|++++|+.|=.|+ .+-+|+.. .+.+ .....++.. | . .+.|.. .... . .. ..-
T Consensus 8 ~~i~~~~~i~Ap~e~Vw~a~tdpe-~~~~W~~p-~~~~~~~~~~d~~~---G--g---~~~~~~~~~~G---~-~~-~~g 72 (164)
T 2l9p_A 8 NKIIFTRTFSAPINKVFDAYTKRE-LFEQWFHP-QDASVTVYDFNATK---G--G---SAFYAIQAPQM---I-SY-TIA 72 (164)
T ss_dssp SEEEECCEESSCHHHHHHHHHCHH-HHTTTCCC-TTCEEEEEECCCST---T--E---EEEEEEEETTE---E-EE-EEE
T ss_pred ceEEEEEEeCCCHHHHHHHhCCHH-HHHhccCC-CCceeeEEEEeccC---C--C---EEEEEEECCCC---C-EE-EEE
Confidence 357888999999999999987542 23344321 1211 112233321 2 1 234432 2221 1 12 344
Q ss_pred EEEeeC-CceEEEEEeeeCCC-CCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHHH
Q 003874 95 TYLKAN-GQEFAILVTVSTPD-VPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKE 172 (790)
Q Consensus 95 ~~~~~~-~~~~~v~~~~~tpd-VP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~~ 172 (790)
+++..+ .+.++..-....++ .|-+.-......|.|. ..+ ..|+|++... |....-...+++.+..+|...
T Consensus 73 ~v~e~~p~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~-----~~~-~gT~l~~~~~--~~~~~~~~~~~~~~~~~Gw~~ 144 (164)
T 2l9p_A 73 EYLQVDAPYYIEYLDYFATSKGEKDTSMPGMHITLNFE-----EVK-GKTTVTSTST--FPTESAAQQAIDMGVETGMNS 144 (164)
T ss_dssp EESCCBTTTEEEEEEEEEBTTBSCCSSSCCEEEEEEEC-----CCS-SSEEEEEEEE--CSSTTHHHHHHHHTHHHHHHH
T ss_pred EEEEEcCCCEEEEEEEecCCCCCccCCCCceEEEEEEE-----ECC-CCEEEEEEEE--cCCHHHHHHHHHhhHHHHHHH
Confidence 566665 44544444333222 4432222356678888 443 4799998865 433222234445567778877
Q ss_pred HHHHHHHHHHhhc
Q 003874 173 SFEQFANLLAQNL 185 (790)
Q Consensus 173 ~~~~~~~~l~~~~ 185 (790)
.++.|...|.+.+
T Consensus 145 ~L~~L~~~le~~~ 157 (164)
T 2l9p_A 145 TLNQLEKLLNQKL 157 (164)
T ss_dssp HHHHHHHHHHSSC
T ss_pred HHHHHHHHHHHhh
Confidence 7777777766543
No 100
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=45.22 E-value=1.8e+02 Score=26.62 Aligned_cols=144 Identities=14% Similarity=0.145 Sum_probs=72.9
Q ss_pred eeccccCCCHHHHhhhccCchHHHHHHHHcCCc-ceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCC
Q 003874 621 VYNAELPISVKALMEMFDGGKLEHQVMEKSGCH-NYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 699 (790)
Q Consensus 621 v~~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~-d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~ 699 (790)
.++..|+++++.+|+.+.+.+...+++--.+.+ .....++. .|+. +.|.... +-|........+......
T Consensus 15 ~~~~~i~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~---~Gg~---~~~~~~~---~~g~~~~~~~~v~e~~p~ 85 (172)
T 2ldk_A 15 SIVAEFDADVKRVWAIWEDPRQLERWWGPPTWPATFETHEFT---VGGK---AAYYMTG---PDGTKARGWWQFTTIEAP 85 (172)
T ss_dssp EEEEEESSCHHHHHHHHHCHHHHHTTSSCTTSCEEEEEECCS---TTCE---EEEEEEC---TTSCEEEEEEEEEEECSS
T ss_pred EEEEEeCCCHHHHHHHhCCHHHHHhccCCCCcccceEEEeec---CCCE---EEEEEEC---CCCCEEeeEEEEEEEcCC
Confidence 455678999999999998887766664211211 01112222 2332 4444312 222222223334455566
Q ss_pred CcEEEEEEEe-cCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHHH
Q 003874 700 EGWIVNEVMS-LHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVER 778 (790)
Q Consensus 700 ~~~vv~~~~t-~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~k 778 (790)
..++..-... ..+.|-++--.....|.|+..+ ++|+|.+... +...-....++.. ++..-+...++.|+.
T Consensus 86 ~rl~~~~~~~~~~g~p~~~~~~~~v~~~l~~~~---~gT~lt~~~~--~~~~~~~~~~~~~----~~~~Gw~~~L~~L~~ 156 (172)
T 2ldk_A 86 DHLEFDDGFADEHGAPVDELGVTHATVKLEPLE---NRTRMTIIST--FESEEQMQKMAEM----GMEEGMREAIEQIDA 156 (172)
T ss_dssp SEEEEEEEEBCSSCCBCTTTCEEEEEEEEEEET---TEEEEEEEEE--ESCHHHHHHHHHH----THHHHHHHHHHHHHH
T ss_pred CEEEEEEeecCCCCCccCCCccEEEEEEEEEcC---CCEEEEEEEE--cCCHHHHHHHHHh----hHHHHHHHHHHHHHH
Confidence 6666654332 1234533322466778888766 5788877654 3211112223322 445555566666666
Q ss_pred HHHh
Q 003874 779 EILF 782 (790)
Q Consensus 779 ~v~~ 782 (790)
.+..
T Consensus 157 ~le~ 160 (172)
T 2ldk_A 157 VLSE 160 (172)
T ss_dssp HHTC
T ss_pred HHHH
Confidence 5543
No 101
>2y3a_A Phosphatidylinositol-4,5-bisphosphate 3-kinase Ca subunit beta isoform; transferase, phosphoinositide 3-kinase, RTK; HET: GD9; 3.30A {Mus musculus}
Probab=44.69 E-value=18 Score=44.54 Aligned_cols=70 Identities=21% Similarity=0.168 Sum_probs=49.3
Q ss_pred ceEEEEEEEEeecCCCCCCCCCCCcEEEEEE--CCeE----eeeecccCCCCCeEeeEEEEEeec---CCCCeEEEEEEe
Q 003874 301 GWVLTVALVEGVNLASSEMTGLSDPYVVFTC--NGKT----RTSSVQLQTCDPQWHDILEFDAME---EPPSVLDVEVFD 371 (790)
Q Consensus 301 ~g~L~V~vl~A~~L~~~d~~g~sDPyV~v~l--~~~~----~kT~v~~~tlnP~WnE~f~f~v~~---~~~~~L~v~V~D 371 (790)
...+.|+|..+.++... ..++-||.+.+ |++. ..|+.+.-..+|.|||.+.|++.- +....|.|+||+
T Consensus 352 ~~~f~i~i~~~~~~~~~---~~~~~~V~~~l~~g~~~L~~~~~T~~~~~~~~~~Wnewl~f~i~~~dLPr~a~L~~ti~~ 428 (1092)
T 2y3a_A 352 NNPFQITLVKGNKLNTE---ETVKVHVRAGLFHGTELLCKTVVSSEISGKNDHIWNEQLEFDINICDLPRMARLCFAVYA 428 (1092)
T ss_dssp CSEEEEEECCCCCCCCC---SSCCCCCBCCEEETTEESSCCCBCCCCCSSSCCCCCEEEEEEEESSSCCTTCEEEEECCC
T ss_pred CCCEEEEEEEeccCCCC---CCceEEEEEEEEECCEEccCceecccccCCCCCccceeEEeCCccccCChhcEEEEEEEE
Confidence 45899999999998654 34677776544 5543 345544446789999999998643 345789999998
Q ss_pred eC
Q 003874 372 FD 373 (790)
Q Consensus 372 ~d 373 (790)
..
T Consensus 429 ~~ 430 (1092)
T 2y3a_A 429 VL 430 (1092)
T ss_dssp C-
T ss_pred ec
Confidence 64
No 102
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=44.17 E-value=96 Score=30.47 Aligned_cols=120 Identities=13% Similarity=0.068 Sum_probs=62.6
Q ss_pred CCCCCCceEEeeEEecCcccccccccCCCchhHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEE
Q 003874 12 PENLQGGILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKAT 91 (790)
Q Consensus 12 ~~~~~g~~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~ 91 (790)
|.+-+-..++-+++++|+++++.++= +..-++.....=+..++..++|. + .--.|.++|.-.. +. ..+.
T Consensus 49 ~~~~~c~~~v~~~I~ApadkVW~lv~--Df~~l~~w~p~V~s~e~~eGd~g----~-vGsVR~lt~~~G~--p~--~~vk 117 (208)
T 3jrs_A 49 LGNGRCSSLLAQRIHAPPETVWSVVR--RFDRPQIYKHFIKSCNVSEDFEM----R-VGCTRDVNVISGL--PA--NTSR 117 (208)
T ss_dssp CCTTEEEEEEEEEESSCHHHHHHHHT--CTTCGGGTCTTEEEEECCTTCCC----S-TTCEEEEEECTTS--SC--CEEE
T ss_pred CCCCeEeEEEEEEEeCCHHHHHHHHh--CcCChhHccccceEEEEecCCCC----C-CCeEEEEEecCCC--cc--ceEE
Confidence 44555667888999999999999873 22212222222233444444431 2 1247999985332 22 2344
Q ss_pred EEEEEEeeCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEe
Q 003874 92 EQQTYLKANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFH 153 (790)
Q Consensus 92 e~q~~~~~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~ 153 (790)
|....++.+...|. -++.-.|.|+.|+-.+.. +.|. .+++.|+ |.|.++|.
T Consensus 118 ErL~~lDde~~~~s--YsIieG~lpv~~Y~sti~---V~p~----~~g~~t~--V~Wt~~fe 168 (208)
T 3jrs_A 118 ERLDLLDDDRRVTG--FSITGGEHRLRNYKSVTT---VHRF----EKEEEEE--RIWTVVLE 168 (208)
T ss_dssp EEEEEEETTTTEEE--EEEEESSSSCTTCEEEEE---EEEE----EC-------CEEEEEEE
T ss_pred EEEEEEeccCCEEE--EEEeeCCcceeeEEEEEE---EEEc----cCCCccE--EEEEEEEE
Confidence 55444443333333 223336799998876433 4521 1234555 66777776
No 103
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=43.99 E-value=2.5e+02 Score=27.74 Aligned_cols=110 Identities=12% Similarity=0.072 Sum_probs=61.1
Q ss_pred EEEEEEEeecCCCceeeEEEEEEEEEe-eCCceEE-EEEeeeCCCCCCCCee---EEEEEEEEecCCCCCCCCCccEEEE
Q 003874 72 TRAVSYMKAATKLVKAVKATEQQTYLK-ANGQEFA-ILVTVSTPDVPYGNTF---NVQLLYKIIPGPELSSGEDSSHLII 146 (790)
Q Consensus 72 ~R~~~y~~~~~~~~k~~~~~e~q~~~~-~~~~~~~-v~~~~~tpdVP~g~~F---~v~~~y~~~~~~~~~~~~~~~~l~v 146 (790)
+..+-|+.+...+++.=-..--..... .++..|+ +..++.-|++|--++= .....|+|. +.++++|++..
T Consensus 118 ~~I~y~~~~~p~p~~~RDfv~~r~~r~~~~~g~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~-----P~~~~~t~vt~ 192 (237)
T 2pso_A 118 TEIYQYVLNSMAPHPSRDFVVLRTWKTDLPKGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIE-----PCGSGKSRLTH 192 (237)
T ss_dssp EEEEEEEECCSSSCCCEEEEEEEEEESCCGGGCEEEEEEECCCTTCCCCSSEECCEEEEEEEEE-----ECSTTCEEEEE
T ss_pred cEEEEEEecCCCCcCCeEEEEEEEEEEECCCCEEEEEEEcccCCCCCCCCcEEEEEeccEEEEE-----ECCCCCEEEEE
Confidence 344444444444554333222222222 2334444 5567778888876322 245789999 45678899999
Q ss_pred EEEEEEeeeeeeeeeeeccccccHHHHHHHHHHHHHhhccccccCC
Q 003874 147 SWGIDFHQSTMMRGMIEGGARQGLKESFEQFANLLAQNLKILDSKD 192 (790)
Q Consensus 147 s~~i~~~~~~~~K~~Ie~~~~~G~~~~~~~~~~~l~~~~~~~~~~~ 192 (790)
-..++..|+ +=..+.+. +......+...|++.++....+.
T Consensus 193 ~~~~Dp~G~--iP~~ln~~----~~~~~~~~l~~LR~~~~~~~~~~ 232 (237)
T 2pso_A 193 ICRIDLKGH--SPEWYSKG----FGHLCAAEVARIRNSFQPLIAEG 232 (237)
T ss_dssp EEEECCSSS--CTTTTTTH----HHHHHHHHHHHHHHTTSCC----
T ss_pred EEEeCCCCC--chHHHHHH----HHHHHHHHHHHHHHHHHhhcCCC
Confidence 999988764 32333322 33333556777888887766554
No 104
>3tvq_A Multifunctional cyclase-dehydratase-3-O-methyl TR TCMN; tetracenomycin, aromatase, taxifolin, dihyroquercet helix-GRIP fold; HET: DQH; 1.67A {Streptomyces glaucescens} PDB: 2rer_A 2res_A 2rez_A
Probab=42.57 E-value=2.2e+02 Score=26.63 Aligned_cols=119 Identities=6% Similarity=0.057 Sum_probs=61.0
Q ss_pred cccCCCHHHHhhhccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEE-EeecCCCCcE
Q 003874 624 AELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQ-KSPLASGEGW 702 (790)
Q Consensus 624 ~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~-~~~~~~~~~~ 702 (790)
..++.+++.+|++..|-+-+.+++-.+....+... + +. .+.+++.-.+... +.+...-. .....+...+
T Consensus 9 i~I~a~~~~v~~lv~Dv~~~p~w~p~~~~~~~~~~----~--~~---~~~~~l~~~~~~~-G~~~~~ts~~~~d~~~~~I 78 (169)
T 3tvq_A 9 IVVNAPFELVWDVTNDIEAWPELFSEYAEAEILRQ----D--GD---GFDFRLKTRPDAN-GRVWEWVSHRVPDKGSRTV 78 (169)
T ss_dssp EEESSCHHHHHHHHTCGGGHHHHCTTEEEEEEEEE----E--TT---EEEEEEEECCCTT-SCCCEEEEEEEEEGGGTEE
T ss_pred EEecCCHHHHHHHHHhhhHHHHHHhheeEEEEEec----C--CC---EEEEEEEEEecCC-CeEEEEEEEEEEcCCCcEE
Confidence 45799999999988887777888765432222211 1 11 2333321111221 22222111 1111222222
Q ss_pred EEEEEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEeccc-----chhhhhhhhh
Q 003874 703 IVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKST-----KFQQRITQNI 761 (790)
Q Consensus 703 vv~~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst-----~~K~~Iek~~ 761 (790)
.... ...+ |+.. .+.+|.+++.+ .+ |+|......+|.... |++..|..+.
T Consensus 79 ~~~~--l~~g-Pf~~---~~g~W~f~p~~--~g-t~V~~~~df~~~~~~p~~~~~~~~av~~~~ 133 (169)
T 3tvq_A 79 RAHR--VETG-PFAY---MNLHWTYRAVA--GG-TEMRWVQEFDMKPGAPFDNAHMTAHLNTTT 133 (169)
T ss_dssp EEEE--SSCT-TEEE---EEEEEEEEEET--TE-EEEEEEEEEEECTTCSSCHHHHHHHHHHHH
T ss_pred EEEE--cCCC-Chhh---eeeEEEEEECC--CC-EEEEEEEEEEecCCCcccHHHHHHHHHhhH
Confidence 2211 1134 7653 67799999987 34 888887777776332 2455555544
No 105
>2flh_A Cytokinin-specific binding protein; zeatin, pathogenesis-related proteins, multiple- ligand binding, plant protein; HET: ZEA; 1.20A {Vigna radiata} PDB: 3c0v_A*
Probab=41.82 E-value=1.1e+02 Score=28.24 Aligned_cols=140 Identities=15% Similarity=0.121 Sum_probs=72.1
Q ss_pred CceEEeeEEecCcccccccccCCCc-hh-HHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEE
Q 003874 17 GGILLDQLYQVSPCDLNTFLFAPDS-QF-RKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQ 94 (790)
Q Consensus 17 g~~~~~~~~~~~~~~l~~llf~~~s-~f-~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q 94 (790)
|.+-.+.+.++|++++|.++.+ +. .. -+++-..-+..++..++|. .. -.|.++|.-.. .+ ..+.|.-
T Consensus 3 ~~~~~e~~i~a~a~kvw~~~v~-d~~~l~pk~~P~~i~s~~~~eGdgg--~G----svr~~~~~~g~-~~---~~~kErl 71 (155)
T 2flh_A 3 KEFNTQTELSVRLEALWAVLSK-DFITVVPKVLPHIVKDVQLIEGDGG--VG----TILIFNFLPEV-SP---SYQREEI 71 (155)
T ss_dssp EEEEEEEEESSCHHHHHHHHHT-SCTTHHHHHCTTTEEEEEEEECSSS--TT----CEEEEEECTTS-SS---CEEEEEE
T ss_pred cEEEEEEEecCCHHHHHHHHhc-ccccccchhccccceEEEEEcCCCC--CC----eEEEEEeeCCC-CC---cEEEEEE
Confidence 4566778899999999999655 33 33 3443334345566677762 12 37889986211 11 2333443
Q ss_pred EEEeeCCceEEEEEeeeCCCC---CCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeee-eeeeeeeccccccH
Q 003874 95 TYLKANGQEFAILVTVSTPDV---PYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQST-MMRGMIEGGARQGL 170 (790)
Q Consensus 95 ~~~~~~~~~~~v~~~~~tpdV---P~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~-~~K~~Ie~~~~~G~ 170 (790)
. ..|.....+.-++.=-|+ ||-++ ... +.+.| .+++.| .|.|.++|.... ..- + ...+
T Consensus 72 ~--~iD~~~~~~~y~iieg~~l~~~~~~~-~~~--i~v~p-----~~~ggs--~v~wt~~y~~~~~~~~---~---~~~~ 133 (155)
T 2flh_A 72 T--EFDESSHEIGLQVIEGGYLSQGLSYY-KTT--FKLSE-----IEEDKT--LVNVKISYDHDSDIEE---K---VTPT 133 (155)
T ss_dssp E--EEETTTTEEEEEEEEEGGGGTTCSEE-EEE--EEEEE-----EETTEE--EEEEEEEEEC-------------CCHH
T ss_pred E--EEeCCCCEEEEEEEeccccccCceEE-EEE--EEEEE-----CCCCCE--EEEEEEEEEECCCCcc---C---hhHh
Confidence 3 333333333333332233 55443 333 34553 334566 577888888653 111 1 2334
Q ss_pred H--HHHHHHHHHHHhhc
Q 003874 171 K--ESFEQFANLLAQNL 185 (790)
Q Consensus 171 ~--~~~~~~~~~l~~~~ 185 (790)
+ +.+..+.+.|..++
T Consensus 134 ~~~~~~~~~~k~ie~yl 150 (155)
T 2flh_A 134 KTSQSTLMYLRRLERYL 150 (155)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH
Confidence 4 55566666666554
No 106
>2vq5_A S-norcoclaurine synthase; lyase, S- norcoclaurine biosynthesis, dopamine, hydroxybenzaldehyde; HET: MSE LDP HBA; 2.09A {Thalictrum flavum} PDB: 2vne_A*
Probab=41.16 E-value=2.6e+02 Score=27.15 Aligned_cols=142 Identities=8% Similarity=0.027 Sum_probs=75.8
Q ss_pred eccccCCCHHHHhhhc-c-Cc-hHHHHHHHH-cCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecC
Q 003874 622 YNAELPISVKALMEMF-D-GG-KLEHQVMEK-SGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLA 697 (790)
Q Consensus 622 ~~~~~p~s~~~lf~lF-~-~~-~f~~~~~~~-~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~ 697 (790)
++.+++++++.+|.+| . |. .+..+++-. -...++. +.|. -+..|.++|. -|.. .+. ..++.....
T Consensus 33 ~eveI~apa~kvW~~~v~~df~~l~pk~~P~~i~s~e~~-GdGg----~GsIR~lt~~----~G~~-~~~-vkErle~iD 101 (201)
T 2vq5_A 33 HELEVAASADDIWTVYSWPGLAKHLPDLLPGAFEKLEII-GDGG----VGTILDMTFV----PGEF-PHE-YKEKFILVD 101 (201)
T ss_dssp EEEEESSCHHHHHHHHTCGGGGGGHHHHSTTSCSEEEEE-SSSS----TTCEEEEECC----TTCS-SCE-EEEEEEEEE
T ss_pred EEEEecCCHHHHHhhhhcCCcccchhhhCcccceEEEEe-cCCC----CCeEEEEEec----CCCc-ccE-EEEEEEEEc
Confidence 4567899999999976 3 44 455777742 2344566 7762 2679999996 1211 112 222222223
Q ss_pred CCCcEEEEEEEecCC---CCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccch-hhhhhhhhHHhHHHHHHHHH
Q 003874 698 SGEGWIVNEVMSLHD---VPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKF-QQRITQNITEKFTHRLKEMI 773 (790)
Q Consensus 698 ~~~~~vv~~~~t~~d---VPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~-K~~Iek~~~~g~~~~~k~~~ 773 (790)
+.+..+--++.- -| .||.+ ......+...+ .++|. |.+.++|.+..-. ..- +.. ..++.+..++
T Consensus 102 de~~~~sYsiie-Gd~l~~~~~~---y~~tikv~p~~--dggs~--vkWt~~ye~~~~~~~~~-e~~---~~~~~~~~~~ 169 (201)
T 2vq5_A 102 NEHRLKKVQMIE-GGYLDLGVTY---YMDTIHVVPTG--KDSCV--IKSSTEYHVKPEFVKIV-EPL---ITTGPLAAMA 169 (201)
T ss_dssp TTTTEEEEEEEE-EGGGGTTEEE---EEEEEEEEEEE--TTEEE--EEEEEEEEECGGGHHHH-TTT---CCSHHHHHHH
T ss_pred hhhCEEEEEEEe-cCccccceeE---EEEEEEEEECC--CCCeE--EEEEEEEEECCCCCCCC-hhH---HHHHHHHHHH
Confidence 333322223332 12 24433 33344445544 35665 5566666653221 111 111 3467788999
Q ss_pred HHHHHHHHhccCC
Q 003874 774 ELVEREILFATQQ 786 (790)
Q Consensus 774 ~~~~k~v~~~~~~ 786 (790)
+.++.++..+..+
T Consensus 170 KaiE~yLlanp~~ 182 (201)
T 2vq5_A 170 DAISKLVLEHKSK 182 (201)
T ss_dssp HHHHHHHHSCCCC
T ss_pred HHHHHHHHhCccc
Confidence 9999999887644
No 107
>1xfs_A NC_840354, conserved hypothetical protein; structural genomics, protein structure initiative, NESG, ALP protein, PSI; 1.70A {Nitrosomonas europaea} SCOP: d.129.3.5
Probab=39.74 E-value=1.6e+02 Score=27.31 Aligned_cols=111 Identities=9% Similarity=0.035 Sum_probs=54.7
Q ss_pred eeccccCCCHHHHhhhccCchHHHHHHHHcCCc-ceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCC
Q 003874 621 VYNAELPISVKALMEMFDGGKLEHQVMEKSGCH-NYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 699 (790)
Q Consensus 621 v~~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~-d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~ 699 (790)
.++..|+++++.+|+.+.|.+.+.++.--.+++ .....++. .|+. +.|.+..+- |...............
T Consensus 13 ~~~r~i~Ap~e~Vw~altdp~~~~~W~~p~~~~~~~~~~d~~---~Gg~---~~~~~~~~~---G~~~~~~~~v~e~~p~ 83 (178)
T 1xfs_A 13 MLKRELAVPVNLVWRGLTEPELLKKWFVPKPWSISDCRVDLR---PGGE---FYTVMQDPE---GNKFPNSGCFLEVTDE 83 (178)
T ss_dssp EEEEEESSCHHHHHHHHHCHHHHTTTSSCTTCEEEEEEECCS---TTCE---EEEEEECTT---CCEEEEEEEEEEEETT
T ss_pred EEEEEecCCHHHHHHHhCCHHHHhhCCCCCCeeeeEEEEeeE---CCcE---EEEEEECCC---CCEEEEEEEEEEEeCC
Confidence 445678999999999888877655554212221 01112222 2332 444421222 2222222233344455
Q ss_pred CcEEEEEEEecCCCCCCCce----------EEEEEEEEEecCCCCCccEEEEEEE
Q 003874 700 EGWIVNEVMSLHDVPFDDHF----------RVHFRYEIEKSPLAHNACKCAIYIG 744 (790)
Q Consensus 700 ~~~vv~~~~t~~dVPygd~F----------~v~~ry~i~~~~~~~~~c~l~V~~~ 744 (790)
..++..-...-.+.|.++ | ....+|.|+..+ ++|+|.+...
T Consensus 84 ~rl~~~~~~~~~~~~~~~-~~~~~w~~~~~~~~~~~~l~~~~---~gT~l~~~~~ 134 (178)
T 1xfs_A 84 KRLIWTSALVKNYRPAVP-ATTSDKECAHIVMTAVIELQPTS---SGTRYTACAM 134 (178)
T ss_dssp TEEEEESSEEGGGEECCC------------CCEEEEEEEECS---SSEEEEEEEE
T ss_pred CEEEEEEEEcCCCCcccc-ccccccccccccEEEEEEEEECC---CCEEEEEEEE
Confidence 555555222111223321 1 256678888765 5788877655
No 108
>2d4r_A Hypothetical protein TTHA0849; start domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.40A {Thermus thermophilus} SCOP: d.129.3.6
Probab=39.54 E-value=1.8e+02 Score=24.92 Aligned_cols=138 Identities=5% Similarity=-0.018 Sum_probs=66.1
Q ss_pred ccccCCCHHHHhhhccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCCCcE
Q 003874 623 NAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGEGW 702 (790)
Q Consensus 623 ~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~~~~ 702 (790)
+.+++.|++.+|+++.|-+-+.+++- ++...... ....++....+.+.+ ++ ....-+.......++..+
T Consensus 7 ~~~i~ap~~~V~~~l~d~~~~~~w~p--~~~~~~~~---~~~~~g~~~~~~~~~----~g--~~~~~~~~~~~~~~~~~i 75 (147)
T 2d4r_A 7 ERYIPAPPERVYRLAKDLEGLKPYLK--EVESLEVV---AREGARTRSRWVAVA----MG--KKVRWLEEEEWDDENLRN 75 (147)
T ss_dssp EEEESSCHHHHHHHHHCHHHHGGGCT--TEEEEEEE---EEETTEEEEEEEEEE----TT--EEEEEEEEEEEETTTTEE
T ss_pred EEEeCCCHHHHHHHHhChhhhhhhcc--cccEEEEE---EeCCCccEEEEEEEe----CC--ceEEEEEEEEEcCCCcEE
Confidence 35679999999998877665555543 22222211 111223333344431 11 111111111222334444
Q ss_pred EEEEEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHHHHHHh
Q 003874 703 IVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVEREILF 782 (790)
Q Consensus 703 vv~~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~k~v~~ 782 (790)
......- |+ .. ....|.++..+ . +|+|......++. ..++..++..-...-++..++.+++.+++.+..
T Consensus 76 ~~~~~~g----~~-~~--~~~~~~~~~~~--~-gT~v~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~lk~~~e~ 144 (147)
T 2d4r_A 76 RFFSPEG----DF-DR--YEGTWVFLPEG--E-GTRVVLTLTYELT-IPIFGGLLRKLVQKLMQENVESLLKGLEERVLA 144 (147)
T ss_dssp EEEEEEE----SC-SE--EEEEEEEEECS--S-SEEEEEEEEEECC-CTTTTTTTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEeccC----Ch-hh--eEEEEEEEECC--C-CcEEEEEEEEecC-CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4443222 44 22 25678888876 3 4887776666654 234444444333333344555555555555544
No 109
>3pu2_A Uncharacterized protein; SRPBCC superfamily, PSI-biology, NESG, RHR263, structural GE protein structure initiative; HET: MSE; 2.61A {Rhodobacter sphaeroides}
Probab=38.26 E-value=80 Score=29.21 Aligned_cols=142 Identities=8% Similarity=0.025 Sum_probs=0.0
Q ss_pred eEEeeEEecCcccccccccCCCchhHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEEEe
Q 003874 19 ILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTYLK 98 (790)
Q Consensus 19 ~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~~~ 98 (790)
+.+..+|++|++++|+.|=.|+ .+-+|+....-.......++..+ + .|.-....+-...-...-....-
T Consensus 15 i~~~~~i~Ap~e~Vw~altdp~-~~~~W~~~~~~~~~~~~~d~~~G--g--------~~~~~~~~~~G~~~~~~g~v~e~ 83 (164)
T 3pu2_A 15 LEFRRHFAATPEQLWAALTSPA-LLPAWLFARGWPMTECVFEPHKG--G--------LIRQVWTGPEGRTRGLTGRVILA 83 (164)
T ss_dssp EEEEEEESSCHHHHHHHHHCTT-TGGGTSCBTTBCEEEEEECCSTT--C--------EEEEEEECGGGCEEEEEEEEEEE
T ss_pred EEEEEEECCCHHHHHHHhcCHH-HHhhEeCCCCeeeEEEEEeccCC--C--------EEEEEEECCCCCEEEEEEEEEEE
Q ss_pred eCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHHHHHHHHH
Q 003874 99 ANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKESFEQFA 178 (790)
Q Consensus 99 ~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~~~~~~~~ 178 (790)
.+++.++..-....++.| |. ....|-|. ..++. |+|++... |........++..+..+|-...++.|.
T Consensus 84 ~p~~rl~~t~~~~~~~~~-~~---s~vt~~l~-----~~~~g-T~l~l~~~--~~~~~~~~~~~~~~~~~GW~~~L~~L~ 151 (164)
T 3pu2_A 84 EPPHRLIHSELYDEDWTG-GE---TLVTLQLL-----PVEGG-TELAMAVD--YATPEARDAVAASAMATEMEEAYRHLD 151 (164)
T ss_dssp ETTTEEEEEEBCC---CC-SC---EEEEEEEE-----EETTE-EEEEEEEE--CSSTTHHHHHHTSTHHHHHHHHHHHHH
T ss_pred cCCCEEEEEEeccCCCCC-CC---EEEEEEEE-----EcCCC-EEEEEEEE--eCCHHHHHHHHHhhHHHHHHHHHHHHH
Q ss_pred HHHHh
Q 003874 179 NLLAQ 183 (790)
Q Consensus 179 ~~l~~ 183 (790)
.+|.+
T Consensus 152 ~~l~~ 156 (164)
T 3pu2_A 152 VMLAA 156 (164)
T ss_dssp HHHHH
T ss_pred HHHHH
No 110
>3jrs_A PYL1, putative uncharacterized protein AT5G46790; plant hormone receptor, abscisic acid, hormone recepto; HET: A8S; 2.05A {Arabidopsis thaliana}
Probab=33.80 E-value=1.9e+02 Score=28.26 Aligned_cols=114 Identities=4% Similarity=-0.104 Sum_probs=57.1
Q ss_pred cccceeccccCCCHHHHhhhccCchHHHHHHHHcCCcceeecCcccCC--CCceEEEEEEEecccccCCCceeceEEEEe
Q 003874 617 KMSKVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVK--PGVCERHLSYRFNRHVSIFGGEVTCTQQKS 694 (790)
Q Consensus 617 ~~~~v~~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~--~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~ 694 (790)
....+...+++++++.++.++.|-.-..+++. .+.......++ .-+..|.++|. -|.+...+.+. ..
T Consensus 53 ~c~~~v~~~I~ApadkVW~lv~Df~~l~~w~p-----~V~s~e~~eGd~g~vGsVR~lt~~----~G~p~~~vkEr--L~ 121 (208)
T 3jrs_A 53 RCSSLLAQRIHAPPETVWSVVRRFDRPQIYKH-----FIKSCNVSEDFEMRVGCTRDVNVI----SGLPANTSRER--LD 121 (208)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTCTTCGGGTCT-----TEEEEECCTTCCCSTTCEEEEEEC----TTSSCCEEEEE--EE
T ss_pred eEeEEEEEEEeCCHHHHHHHHhCcCChhHccc-----cceEEEEecCCCCCCCeEEEEEec----CCCccceEEEE--EE
Confidence 34555667789999999997754332233332 12222222221 23679999997 23222223322 22
Q ss_pred ecCCCCcEEEEEEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEe
Q 003874 695 PLASGEGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWL 748 (790)
Q Consensus 695 ~~~~~~~~vv~~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~ 748 (790)
...+.+..+--++.- .++|+.+|-. ...+.+... .++|. |.+.+.|.
T Consensus 122 ~lDde~~~~sYsIie-G~lpv~~Y~s---ti~V~p~~~-g~~t~--V~Wt~~fe 168 (208)
T 3jrs_A 122 LLDDDRRVTGFSITG-GEHRLRNYKS---VTTVHRFEK-EEEEE--RIWTVVLE 168 (208)
T ss_dssp EEETTTTEEEEEEEE-SSSSCTTCEE---EEEEEEEEC--------CEEEEEEE
T ss_pred EEeccCCEEEEEEee-CCcceeeEEE---EEEEEEccC-CCccE--EEEEEEEE
Confidence 233334433333333 6789998764 444555431 24554 55666665
No 111
>2pso_A STAR-related lipid transfer protein 13; alpha and beta protein, lipid binding, helix swapping, struc genomics, structural genomics consortium, SGC; 2.80A {Homo sapiens} SCOP: d.129.3.2
Probab=32.30 E-value=1.4e+02 Score=29.55 Aligned_cols=50 Identities=10% Similarity=0.033 Sum_probs=35.3
Q ss_pred CCcEEE-EEEEecCCCCCCCceE---EEEEEEEEecCCCCCccEEEEEEEEEEecc
Q 003874 699 GEGWIV-NEVMSLHDVPFDDHFR---VHFRYEIEKSPLAHNACKCAIYIGISWLKS 750 (790)
Q Consensus 699 ~~~~vv-~~~~t~~dVPygd~F~---v~~ry~i~~~~~~~~~c~l~V~~~V~w~Ks 750 (790)
+..++| .....-+++|-.++=+ ....|.|++.+ +++|+|.....++..++
T Consensus 148 ~g~~vi~~~Sv~h~~~P~~g~VR~~~~~~g~~i~P~~--~~~t~vt~~~~~Dp~G~ 201 (237)
T 2pso_A 148 KGMCTLVSLSVEHEEAQLLGGVRAVVMDSQYLIEPCG--SGKSRLTHICRIDLKGH 201 (237)
T ss_dssp GGCEEEEEEECCCTTCCCCSSEECCEEEEEEEEEECS--TTCEEEEEEEEECCSSS
T ss_pred CCEEEEEEEcccCCCCCCCCcEEEEEeccEEEEEECC--CCCEEEEEEEEeCCCCC
Confidence 344544 4444556788763322 46889999986 68999999999998764
No 112
>2ns9_A Hypothetical protein APE2225; uncharacterized conserved protein, structural genomics, PSI, structure initiative; 1.80A {Aeropyrum pernix} SCOP: d.129.3.10
Probab=31.41 E-value=38 Score=30.64 Aligned_cols=134 Identities=13% Similarity=0.146 Sum_probs=69.5
Q ss_pred eEEeeEEecCcccccccccCCCchhH-HHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEEE
Q 003874 19 ILLDQLYQVSPCDLNTFLFAPDSQFR-KDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTYL 97 (790)
Q Consensus 19 ~~~~~~~~~~~~~l~~llf~~~s~f~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~~ 97 (790)
+-...++++|++++|++|=.| ..+ +++- .+.++. ..++ .... ..+... .+++. ....+-++.
T Consensus 15 i~~~~~i~ap~e~Vw~~l~D~--~~~~~w~p---~~~~~~------~~~~--~~~~--~~~~~~-g~~~~-~~~~~~~~~ 77 (157)
T 2ns9_A 15 YEGSFEVSKTPEEVFEFLTDP--KRFSRAFP---GFKSVE------VEDG--SFTI--ELRLSL-GPLRG-DARVRASFE 77 (157)
T ss_dssp EEEEEEESSCHHHHHHHHTCH--HHHGGGST---TEEEEE------EETT--EEEE--EEEEES-SSSEE-EEEEEEEEE
T ss_pred EeeEEEEcCCHHHHHHHHcCH--HHHHhhCC---CceEEE------ECCC--EEEE--EEEEEE-cceeE-EEEEEEEEE
Confidence 455678999999999998743 333 3322 122221 1122 2111 112111 12221 112223333
Q ss_pred ee-CCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeee--eeeeeeeeccccccHHHHH
Q 003874 98 KA-NGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQS--TMMRGMIEGGARQGLKESF 174 (790)
Q Consensus 98 ~~-~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~--~~~K~~Ie~~~~~G~~~~~ 174 (790)
.. +...+.+..... + .+..|.....|-|. ..+ +.|+|.....+++.+. .+++.++++-+...++..+
T Consensus 78 ~~~~~~~i~~~~~~~--~--~~~~~~~~~~~~l~-----~~~-~gT~v~~~~~~~~~g~l~~~~~~~~~~~~~~~~~~~~ 147 (157)
T 2ns9_A 78 DLEKPSKATVKGSGR--G--AGSTLDFTLRFAVE-----PSG-GGSRVSWVFEGNVGGLAASMGGRVLDSLARRMINDVI 147 (157)
T ss_dssp EEETTTEEEEEEEEE--C--SSEEEEEEEEEEEE-----EET-TEEEEEEEEEEEEEEGGGGSCHHHHHHHHHHHHHHHH
T ss_pred ecCCCcEEEEEEEec--C--CCccEEEEEEEEEE-----eCC-CcEEEEEEEEEEECcCHHHhhHHHHHHHHHHHHHHHH
Confidence 33 345555443322 1 12246677788898 444 7899999999988774 4566667655555554444
Q ss_pred HHHHH
Q 003874 175 EQFAN 179 (790)
Q Consensus 175 ~~~~~ 179 (790)
+.|..
T Consensus 148 ~~lk~ 152 (157)
T 2ns9_A 148 SGVKR 152 (157)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 44333
No 113
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=31.35 E-value=3.2e+02 Score=25.56 Aligned_cols=112 Identities=13% Similarity=0.176 Sum_probs=63.7
Q ss_pred eEEeeEEecCcccccccccCCCchh-H-HHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEEEEEEE
Q 003874 19 ILLDQLYQVSPCDLNTFLFAPDSQF-R-KDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKATEQQTY 96 (790)
Q Consensus 19 ~~~~~~~~~~~~~l~~llf~~~s~f-~-~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~e~q~~ 96 (790)
+-.+-+.++|++++|.++.. +..- + +++-..=+..++..+++ ..+ -.|.++|. .+.+. + .+.+
T Consensus 11 ~~~ei~i~apa~kvw~~~v~-d~~~l~pk~~P~~v~s~e~~eGdg--g~G----sir~~t~~----g~~~~--~--kErl 75 (168)
T 3rws_A 11 SESEYVSSLSAEKLYRGIVE-DGNIIYPKALPRFIEKAETLEGDG--GPG----TIKKLTFV----GDFGS--T--KQHI 75 (168)
T ss_dssp EEEEEEESSCHHHHHHHHHT-SHHHHHHHHSTTTEEEEEEEESSS--STT----CEEEEEES----SSSCE--E--EEEE
T ss_pred EEEEEEecCCHHHHHHHHhc-CccccchhhCccccceEEEeeCCC--CCC----eEEEEEEc----CCCeE--E--EEEE
Confidence 34567789999999999854 4332 2 33333445566667774 222 37999997 22222 2 2444
Q ss_pred EeeCCceEEEEEeeeCCCC----CCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeee
Q 003874 97 LKANGQEFAILVTVSTPDV----PYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQS 155 (790)
Q Consensus 97 ~~~~~~~~~v~~~~~tpdV----P~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~ 155 (790)
...|.....+.-++.--|+ ||-+ | ...+.+.| .++..|. |.|..+|.+.
T Consensus 76 ~~iD~~~~~~sY~iiegd~l~~~p~~~-y--~~ti~v~p-----~~~ggs~--v~wt~~y~~~ 128 (168)
T 3rws_A 76 DMVDRENCAYTYSVYEGIALSDQPLEK-I--VFEFKLVP-----TPEEGCI--VKSTTKYYTK 128 (168)
T ss_dssp EEEETTTTEEEEEECSSCCBTTBCEEE-E--EEEEEEEE-----CTTSCEE--EEEEEEEEEC
T ss_pred EEEcccCCEEEEEEEccCcccCcCceE-E--EEEEEEEE-----CCCCceE--EEEEEEEEEC
Confidence 4455555555555555565 5443 2 22445663 3345664 6777777764
No 114
>2i9y_A Major latex protein-like protein 28 or MLP-like protein 28; AT1G70830, BET V1-like, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana}
Probab=30.07 E-value=3.3e+02 Score=25.25 Aligned_cols=141 Identities=10% Similarity=0.120 Sum_probs=72.9
Q ss_pred ccccCCCHHHHhhhcc-CchHHHHHHH-HcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCCC
Q 003874 623 NAELPISVKALMEMFD-GGKLEHQVME-KSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGE 700 (790)
Q Consensus 623 ~~~~p~s~~~lf~lF~-~~~f~~~~~~-~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~~ 700 (790)
+.+++++++.+|.+|. +.....+++- .....++..+.|. . .+..|.++|.. +.+ ..+..+......+.+
T Consensus 22 ev~i~apa~kvw~~~~~d~~~lpk~~P~~i~s~~~~eGd~g--g-~Gsir~~~~~~----gg~--~~~~kErl~~iD~~~ 92 (166)
T 2i9y_A 22 DVEIKASADKFHHMFAGKPHHVSKASPGNIQGCDLHEGDWG--T-VGSIVFWNYVH----DGE--AKVAKERIEAVEPDK 92 (166)
T ss_dssp EEEESSCHHHHHGGGSSCSSCCCCSCSSCCSSCCCCSCCSC--S-TTCCCEEEEEE----TTE--EEEEEEEEEEEETTT
T ss_pred EEEecCCHHHHHHHHhcccccccccccccceEEEEEcCCCC--C-CCeEEEEEEec----CCC--ceEEEEEEEEEeccC
Confidence 3567999999999874 4233344442 2223344456662 2 36799999972 221 112222222223333
Q ss_pred cEEEEEEEecCCCCCCCce-EEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHHHH
Q 003874 701 GWIVNEVMSLHDVPFDDHF-RVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 779 (790)
Q Consensus 701 ~~vv~~~~t~~dVPygd~F-~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~k~ 779 (790)
..+--++.- -|+ .+.| .....+.+.+.+. .++|. |.+.++|.+..-. +..- +.+.+.+..+++.++.+
T Consensus 93 ~~~~y~iie-Gd~--~~~~~~~~~ti~v~p~~~-g~gs~--v~wt~~ye~~~~~---~~~p--~~~~~~~~~~~k~ie~~ 161 (166)
T 2i9y_A 93 NLITFRVIE-GDL--MKEYKSFLLTIQVTPKPG-GPGSI--VHWHLEYEKISEE---VAHP--ETLLQFCVEVSKEIDEH 161 (166)
T ss_dssp TEEEEEECC-TTG--GGTEEEEEEEEEEEEEEE-TTEEE--EEEEEEEEESSTT---TCCT--HHHHHHHHHHHHHHHHH
T ss_pred cEEEEEEEe-CCC--CCCeeEEEEEEEEEECCC-CCCcE--EEEEEEEEECCCC---CCCH--HHHHHHHHHHHHHHHHH
Confidence 322223333 233 2323 4566677777531 14664 5566667643211 1111 23457788888888888
Q ss_pred HHhc
Q 003874 780 ILFA 783 (790)
Q Consensus 780 v~~~ 783 (790)
+.++
T Consensus 162 l~~~ 165 (166)
T 2i9y_A 162 LLAE 165 (166)
T ss_dssp HHSC
T ss_pred HhhC
Confidence 8764
No 115
>2lf2_A Uncharacterized protein; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; NMR {Cytophaga hutchinsonii}
Probab=29.73 E-value=1.3e+02 Score=27.90 Aligned_cols=145 Identities=10% Similarity=0.068 Sum_probs=76.3
Q ss_pred CceEEeeEEecCcccccccccCCCchhHHHHHHHhCcc-ceeeCcCcccCCCCceeEEEEEEEee-cCCCceeeEEEEEE
Q 003874 17 GGILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTK-DVQEGPWEWKSGEMTCLTRAVSYMKA-ATKLVKAVKATEQQ 94 (790)
Q Consensus 17 g~~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~-~~~~~~w~~~~~~~~~~~R~~~y~~~-~~~~~k~~~~~e~q 94 (790)
-.+.+..+|++|++++|+.+=.| ..+-+|+.. .+.+ .....++..+ + .+.|... .... .....-
T Consensus 16 ~~i~~~~~i~Ap~e~Vw~a~tdp-e~~~~W~~p-~~~~~~~~~~d~~~G--g------~~~~~~~~~~G~----~~~~~g 81 (175)
T 2lf2_A 16 KTITIKREFAAVRAIVWEAFTRA-EILDQWWAP-KPWKAKTKSMDFKEG--G------TWLYAMVGPNGE----EHWSIC 81 (175)
T ss_dssp TEEEEEEEESSCHHHHHHHHTCH-HHHHHSSSS-SSSEEEEEEECCSTT--C------EEEEEEECSSSC----EEEEEE
T ss_pred ceEEEEEEEcCCHHHHHHHhCCH-HHHhhCcCC-CCccceEEEEeccCC--C------EEEEEEECCCCC----EEEeEE
Confidence 35888999999999999998753 233355422 1221 1122233222 3 2334322 2221 112234
Q ss_pred EEEeeC-CceEEEEEeeeCC-CCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHHH
Q 003874 95 TYLKAN-GQEFAILVTVSTP-DVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKE 172 (790)
Q Consensus 95 ~~~~~~-~~~~~v~~~~~tp-dVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~~ 172 (790)
+++..+ .+.++..-....+ +.|-++-......|.|. ..+ ..|+|++... |........+++.|+.+|...
T Consensus 82 ~v~e~~p~~rl~~t~~~~~~~g~p~~~~~~~~v~~~l~-----~~~-~gT~l~~~~~--~~~~~~~~~~~~~~~~~Gw~~ 153 (175)
T 2lf2_A 82 EYAIIKPIERFTGKDGFTDASGKLNTEMPRSNWDMRFI-----DKG-EITEVQYHIS--YDDVAQLEATIQMGFKEGITM 153 (175)
T ss_dssp EECCCCSSSEEEEEEEEESSTTCCCTTSCCEEEEEEEE-----EET-TEEEEEEEEE--CSCHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCEEEEEEEecCCCCCcCCCCCcEEEEEEEE-----ECC-CCEEEEEEEe--cCCHHHHHHHHHHhHHHHHHH
Confidence 566665 4444444433322 23432212356678888 443 4799988765 322222333444566778888
Q ss_pred HHHHHHHHHHh
Q 003874 173 SFEQFANLLAQ 183 (790)
Q Consensus 173 ~~~~~~~~l~~ 183 (790)
.++.|...|..
T Consensus 154 ~L~~L~~~le~ 164 (175)
T 2lf2_A 154 AMENLDELLVS 164 (175)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88877777654
No 116
>2wql_A Major allergen DAU C 1; pathogenesis-related protein, plant defense; HET: P4C; 2.70A {Daucus carota} PDB: 2bk0_A
Probab=29.15 E-value=3.4e+02 Score=24.94 Aligned_cols=141 Identities=5% Similarity=-0.031 Sum_probs=73.4
Q ss_pred cccCCCHHHHhh-hccCch-HHHHHHHH-cCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCCC
Q 003874 624 AELPISVKALME-MFDGGK-LEHQVMEK-SGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASGE 700 (790)
Q Consensus 624 ~~~p~s~~~lf~-lF~~~~-f~~~~~~~-~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~~ 700 (790)
.+.++|++.||. +..|.. +..+++-. .++.++ .+.+ .-+..|.++|. .+.+...+ .+ ++...|..
T Consensus 10 ~~~~v~a~kl~ka~v~d~~~l~Pk~~P~~iks~~v-eGdg----~~Gsir~~t~~----~g~~~~~~--kE-rle~iD~~ 77 (154)
T 2wql_A 10 ITSSVSAEKIFSGIVLDVDTVIPKAATGAYKSVEV-KGDG----GAGTVRIITLP----EGSPITTM--TV-RTDAVNKE 77 (154)
T ss_dssp EEESSCHHHHHHHHTTTHHHHHHHHSTTTCSEEEE-ESSS----STTCEEEEECC----TTCSCCEE--EE-EEEEEETT
T ss_pred EEecCCHHHHHHHHhhcccccchhhcccceeEEEE-ECCC----CCCeEEEEEEc----CCCCceEE--EE-EEEEEehh
Confidence 356899999998 555544 66666642 233332 2332 23679999996 23222222 23 33323333
Q ss_pred cEEEE-EEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHHHH
Q 003874 701 GWIVN-EVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 779 (790)
Q Consensus 701 ~~vv~-~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~k~ 779 (790)
...+. ++.- -|+.-..+=.......+.+.+ ..+|.++ +.+.|.+..=. .+.-......++.+..+++.++.|
T Consensus 78 ~~~~~y~iie-Gd~l~~~~~~~~~~ikv~p~~--~ggsvvk--~t~~Y~~~~~~--~~~ee~~~~~~~~~~~~~KaiEay 150 (154)
T 2wql_A 78 ALSYDSTVID-GDILLGFIESIETHMVVVPTA--DGGSITK--TTAIFHTKGDA--VVPEENIKFADAQNTALFKAIEAY 150 (154)
T ss_dssp TTEEEEEEEE-SGGGTTTEEEEEEEEEEEECT--TSCEEEE--EEEEEEESTTC--CCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCEEEEEEEe-ccccccceEEEEEEEEEeeCC--CCcEEEE--EEEEEEECCCC--CCCHHHHHHHHHHHHhHHHHHHHH
Confidence 33333 4433 444333333344556666665 5677544 45666654211 122222333455567788889988
Q ss_pred HHhc
Q 003874 780 ILFA 783 (790)
Q Consensus 780 v~~~ 783 (790)
+.+|
T Consensus 151 Llan 154 (154)
T 2wql_A 151 LIAN 154 (154)
T ss_dssp HHHC
T ss_pred HhcC
Confidence 8764
No 117
>3kl1_A PYL2, putative uncharacterized protein AT2G26040; abscisic acid receptor, crystal, high resolution, PP2C, HORM receptor; 1.55A {Arabidopsis thaliana} PDB: 3kdi_A* 3kdh_A 3nr4_A* 3ns2_A* 3nj0_A* 3nj1_A* 3nmh_A* 3kaz_A 3kb0_A* 3kb3_A* 3ujl_A* 3nmp_A* 3nmt_A* 3nmv_A*
Probab=25.33 E-value=4.5e+02 Score=25.09 Aligned_cols=118 Identities=5% Similarity=-0.062 Sum_probs=58.7
Q ss_pred cccceeccccCCCHHHHhhhccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeec
Q 003874 617 KMSKVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPL 696 (790)
Q Consensus 617 ~~~~v~~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~ 696 (790)
........+++.+++.++.++.+....+.+...-...++..+. ..-+..|.++|. -|.+ .. +..++....
T Consensus 34 ~~~~~~~~~I~Apa~~vW~lv~df~~~~~w~p~I~s~e~~eGd----g~vGsVR~~t~~----~G~p-~~-~vkErL~~i 103 (190)
T 3kl1_A 34 TCTSLITQRIHAPASVVWPLIRRFDNPERYKHFVKRCRLISGD----GDVGSVREVTVI----SGLP-AS-TSTERLEFV 103 (190)
T ss_dssp EEEEEEEEEESSCHHHHHHHHHCTTCGGGTCSSEEEEEEEESS----SSTTCEEEEEEC----SSSS-CE-EEEEEEEEE
T ss_pred ceeEEEEEEecCCHHHHHHHHhCCCChhHcccccCEEEEEcCC----CCCCeEEEEEec----CCCc-cc-eEEEEEEEE
Confidence 3455566788999999999775433222222111111222222 112689999996 1211 11 222222223
Q ss_pred CCCCcEEEEEEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEE
Q 003874 697 ASGEGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGI 745 (790)
Q Consensus 697 ~~~~~~vv~~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V 745 (790)
.+.+..+--++.- -++|..+|-.+..-..++..+.+.++|.+.-++..
T Consensus 104 D~~~~~~sY~iie-G~~~~~~Y~s~~~v~~~~~~~~~~~gt~V~Ws~~f 151 (190)
T 3kl1_A 104 DDDHRVLSFRVVG-GEHRLKNYKSVTSVNEFLNQDSGKVYTVVLESYTV 151 (190)
T ss_dssp ETTTTEEEEEEEE-ESSSCCSCEEEEEEEEEEC-CCCCEEEEEEEEEEE
T ss_pred eccCCEEEEEEEe-cCCccccEEEEEEEEecccccCCCCcEEEEEEEEE
Confidence 3333333223333 57888887777666666553222456655444444
No 118
>2ldk_A Uncharacterized protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Arthrobacter aurescens}
Probab=24.32 E-value=1.9e+02 Score=26.46 Aligned_cols=143 Identities=13% Similarity=0.125 Sum_probs=71.3
Q ss_pred CceEEeeEEecCcccccccccCCCchhHHHHHHHhCcc-ceeeCcCcccCCCCceeEEEEEEEe-ecCCCceeeEEEEEE
Q 003874 17 GGILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTK-DVQEGPWEWKSGEMTCLTRAVSYMK-AATKLVKAVKATEQQ 94 (790)
Q Consensus 17 g~~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~-~~~~~~w~~~~~~~~~~~R~~~y~~-~~~~~~k~~~~~e~q 94 (790)
-.+.+..+|++|++++|+.|=.|+ .+-+++.. .+.+ .....++.. ++ .+.|.. ...... .....
T Consensus 12 ~~i~~~~~i~Ap~e~Vw~altdp~-~~~~W~~p-~~~~~~~~~~d~~~--Gg------~~~~~~~~~~g~~----~~~~~ 77 (172)
T 2ldk_A 12 LSFSIVAEFDADVKRVWAIWEDPR-QLERWWGP-PTWPATFETHEFTV--GG------KAAYYMTGPDGTK----ARGWW 77 (172)
T ss_dssp TEEEEEEEESSCHHHHHHHHHCHH-HHHTTSSC-TTSCEEEEEECCST--TC------EEEEEEECTTSCE----EEEEE
T ss_pred ceEEEEEEeCCCHHHHHHHhCCHH-HHHhccCC-CCcccceEEEeecC--CC------EEEEEEECCCCCE----EeeEE
Confidence 358889999999999999987531 23344321 1111 111223322 22 244432 222211 12344
Q ss_pred EEEeeC-CceEEEEEeeeCC-CCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHHH
Q 003874 95 TYLKAN-GQEFAILVTVSTP-DVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLKE 172 (790)
Q Consensus 95 ~~~~~~-~~~~~v~~~~~tp-dVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~~ 172 (790)
+++..+ .+.++.......+ +.|-++--.....|.|. ..+ ..|+|++... +........++..++.+|...
T Consensus 78 ~v~e~~p~~rl~~~~~~~~~~g~p~~~~~~~~v~~~l~-----~~~-~gT~lt~~~~--~~~~~~~~~~~~~~~~~Gw~~ 149 (172)
T 2ldk_A 78 QFTTIEAPDHLEFDDGFADEHGAPVDELGVTHATVKLE-----PLE-NRTRMTIIST--FESEEQMQKMAEMGMEEGMRE 149 (172)
T ss_dssp EEEEECSSSEEEEEEEEBCSSCCBCTTTCEEEEEEEEE-----EET-TEEEEEEEEE--ESCHHHHHHHHHHTHHHHHHH
T ss_pred EEEEEcCCCEEEEEEeecCCCCCccCCCccEEEEEEEE-----EcC-CCEEEEEEEE--cCCHHHHHHHHHhhHHHHHHH
Confidence 566665 4444444433322 24432212466778888 443 4799888765 322112223344455566655
Q ss_pred HHHHHHHHH
Q 003874 173 SFEQFANLL 181 (790)
Q Consensus 173 ~~~~~~~~l 181 (790)
.++.|...|
T Consensus 150 ~L~~L~~~l 158 (172)
T 2ldk_A 150 AIEQIDAVL 158 (172)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 555555544
No 119
>3rws_A MTN13 protein; zeatin, cytokinin, hormone, lucerne, nodulin, NODU plant protein; HET: ZEA; 1.85A {Medicago truncatula}
Probab=24.15 E-value=4.4e+02 Score=24.57 Aligned_cols=140 Identities=13% Similarity=0.192 Sum_probs=73.9
Q ss_pred ccccCCCHHHHhhhc-cCch-HHHHHHH-HcCCcceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCC
Q 003874 623 NAELPISVKALMEMF-DGGK-LEHQVME-KSGCHNYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 699 (790)
Q Consensus 623 ~~~~p~s~~~lf~lF-~~~~-f~~~~~~-~~g~~d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~ 699 (790)
+.+++++++.+|.+| .|.. +..+++- .-...++..+.+ .-+..|.++|. ++. ..+ .+ ++...|.
T Consensus 14 ei~i~apa~kvw~~~v~d~~~l~pk~~P~~v~s~e~~eGdg----g~Gsir~~t~~-----g~~-~~~--kE-rl~~iD~ 80 (168)
T 3rws_A 14 EYVSSLSAEKLYRGIVEDGNIIYPKALPRFIEKAETLEGDG----GPGTIKKLTFV-----GDF-GST--KQ-HIDMVDR 80 (168)
T ss_dssp EEEESSCHHHHHHHHHTSHHHHHHHHSTTTEEEEEEEESSS----STTCEEEEEES-----SSS-CEE--EE-EEEEEET
T ss_pred EEEecCCHHHHHHHHhcCccccchhhCccccceEEEeeCCC----CCCeEEEEEEc-----CCC-eEE--EE-EEEEEcc
Confidence 346799999999976 5543 4556653 222333444543 23679999986 332 122 22 2322222
Q ss_pred CcEEEE-EEEecCCC----CCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHH
Q 003874 700 EGWIVN-EVMSLHDV----PFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIE 774 (790)
Q Consensus 700 ~~~vv~-~~~t~~dV----Pygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~ 774 (790)
....+. ++.- -|+ ||.+ ....+.+.+.+ ..+|. |.+..+|.+..== ..+.-......++....+++
T Consensus 81 ~~~~~sY~iie-gd~l~~~p~~~---y~~ti~v~p~~--~ggs~--v~wt~~y~~~~~d-~~~~~e~~k~~~~~~~~~~k 151 (168)
T 3rws_A 81 ENCAYTYSVYE-GIALSDQPLEK---IVFEFKLVPTP--EEGCI--VKSTTKYYTKGDD-IELSKDYLEAGIERFEGFTK 151 (168)
T ss_dssp TTTEEEEEECS-SCCBTTBCEEE---EEEEEEEEECT--TSCEE--EEEEEEEEECSSS-CCCCHHHHHHHHHHHHHHHH
T ss_pred cCCEEEEEEEc-cCcccCcCceE---EEEEEEEEECC--CCceE--EEEEEEEEECCCc-cCCCHHHHHHHHHHHHHHHH
Confidence 322222 3332 333 4443 34456666655 45675 4555566642110 01211122345677888899
Q ss_pred HHHHHHHhcc
Q 003874 775 LVEREILFAT 784 (790)
Q Consensus 775 ~~~k~v~~~~ 784 (790)
.++.++..+-
T Consensus 152 ~ie~yllanp 161 (168)
T 3rws_A 152 AVESFLLANP 161 (168)
T ss_dssp HHHHHHHHCT
T ss_pred HHHHHHHhCh
Confidence 9999998764
No 120
>3p9v_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 1.78A {Marinobacter aquaeolei}
Probab=23.51 E-value=3.5e+02 Score=24.60 Aligned_cols=134 Identities=7% Similarity=0.046 Sum_probs=66.9
Q ss_pred cccCCCHHHHhhhccCchHHHHHHHHcCCcceeecCcccCCCCceEEEEEEEe-cccccCCCceeceEE-EEeec-CCCC
Q 003874 624 AELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVKPGVCERHLSYRF-NRHVSIFGGEVTCTQ-QKSPL-ASGE 700 (790)
Q Consensus 624 ~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~~~~~~R~~sY~~-n~~i~~~~~~vt~~Q-~~~~~-~~~~ 700 (790)
..++.+++.+|++..|=+-+...+. ...||....++ . ...+. .-.+|.. ...+.. ..+.. .+..
T Consensus 13 ~~I~ap~e~v~~lv~Dve~w~~~yp-------~~~p~~~~~~~-~---~~~~~a~l~vg~~--~~~~~~~s~~~~~~~~~ 79 (161)
T 3p9v_A 13 LEIPASYDEVFDLLADVPKSASHFP-------KVDKLVDLGNN-A---YRWEMEKVGVDKH--AIQSVYACTYHADKEAG 79 (161)
T ss_dssp EEESSCHHHHHHHHTCHHHHHTTST-------TEEEEEEEETT-E---EEEEECCBSSGGG--CBCCEEEEEEEEETTTT
T ss_pred EEEcCCHHHHHHHHhChhhhHhhCC-------CeEEEEEcCCC-c---eEEEEEEEeeeeE--EEEEEEEEEEEEcCCCC
Confidence 4679999999998765443322211 23456544333 1 22232 1223332 121111 11212 2233
Q ss_pred cEEEEEEEecCCCCCCCc-eEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHHHH
Q 003874 701 GWIVNEVMSLHDVPFDDH-FRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVERE 779 (790)
Q Consensus 701 ~~vv~~~~t~~dVPygd~-F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~k~ 779 (790)
.+..+. . + |+- =....+|.+++.+ +++|+|......++... +-+++++-.-.-+...++.+++...+.
T Consensus 80 ~I~~~~--~--~---g~~~~~l~g~w~f~p~~--~g~t~V~~~~~~e~~~p--l~~ll~~~~~~~~~~~~~~~v~af~~r 148 (161)
T 3p9v_A 80 KITWSP--I--K---GEGNGVVSGSWTLSAKG--DNATAVKFQTSAELTVP--LPSLLKLAISPVIKHEFNSLVDTYMAN 148 (161)
T ss_dssp EEEEEE--C--T---TSTTEEEEEEEEEEESS--SSCEEEEEEEEEEEEEC--SCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEE--e--c---CccceeEEEEEEEEECC--CCeEEEEEEEEEEEcCc--chHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322222 1 2 444 2567899999987 56799888888887632 233333333333445556666555555
Q ss_pred HH
Q 003874 780 IL 781 (790)
Q Consensus 780 v~ 781 (790)
++
T Consensus 149 a~ 150 (161)
T 3p9v_A 149 LK 150 (161)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 121
>3k3k_A Abscisic acid receptor PYR1; ABA receptor, plant hormone receptor, A sensor, drought tolerance, plant development; HET: A8S; 1.70A {Arabidopsis thaliana} PDB: 3njo_A* 3qn1_A* 3k90_A* 3zvu_A* 3jrq_B* 3kdj_A* 3nef_A* 3neg_A* 3nmn_A* 3kay_A*
Probab=22.73 E-value=3.1e+02 Score=26.85 Aligned_cols=112 Identities=4% Similarity=-0.083 Sum_probs=57.1
Q ss_pred cccceeccccCCCHHHHhhhccCchHHHHHHHHcCCcceeecCcccCC--CCceEEEEEEEecccccCCCceeceEEEEe
Q 003874 617 KMSKVYNAELPISVKALMEMFDGGKLEHQVMEKSGCHNYVTTPWDLVK--PGVCERHLSYRFNRHVSIFGGEVTCTQQKS 694 (790)
Q Consensus 617 ~~~~v~~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~d~~~~~W~~~~--~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~ 694 (790)
....+...+++++++.++.++.+-.-...++. .+....+..++ .-+..|.++|. -|.+...+ .++..
T Consensus 49 ~c~~~v~~~I~ApadkVW~lv~dF~~l~~w~p-----~V~s~e~~eGd~g~vGsVR~lt~~----~G~p~~~v--kErL~ 117 (211)
T 3k3k_A 49 SCSSLHAQRIHAPPELVWSIVRRFDKPQTYKH-----FIKSCSVEQNFEMRVGCTRDVIVI----SGLPANTS--TERLD 117 (211)
T ss_dssp EEEEEEEEEESSCHHHHHHHHTCTTCGGGTCS-----SEEEEECCTTCCCCTTCEEEEEES----SSSSCEEE--EEEEE
T ss_pred eEeEEEEEEEcCCHHHHHHHHhCcCChhHcCc-----cceEEEEecCCCCCCCcEEEEEec----CCCccceE--EEEEE
Confidence 34555667789999999997754322222222 23333333332 22679999986 12111222 22222
Q ss_pred ecCCCCcEEEEEEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEec
Q 003874 695 PLASGEGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLK 749 (790)
Q Consensus 695 ~~~~~~~~vv~~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~K 749 (790)
...+.+..+--++.- .+.|+.+|- ..+.+.+.+. . + |.+...|.+
T Consensus 118 ~lDd~~~~~sYsIie-g~lpv~~Y~---sti~V~p~~~--g-g---V~Wt~~fes 162 (211)
T 3k3k_A 118 ILDDERRVTGFSIIG-GEHRLTNYK---SVTTVHRFEK--E-N---RIWTVVLES 162 (211)
T ss_dssp EEETTTTEEEEEEEE-ETTGGGTCE---EEEEEEEEEE--T-T---EEEEEEEEE
T ss_pred EEeccCCEEEEEEee-cCcceeEEE---EEEEEEECCC--C-C---EEEEEEEEE
Confidence 233333332223333 468998754 3344555542 2 2 777777763
No 122
>3qrz_A Abscisic acid receptor PYL5; crystal, hormone receptor; 2.60A {Arabidopsis thaliana}
Probab=22.56 E-value=11 Score=37.78 Aligned_cols=147 Identities=15% Similarity=0.040 Sum_probs=70.5
Q ss_pred CCCCCCceEEeeEEecCcccccccccCCCchhHHHHHHHhCccceeeCcCcccCCCCceeEEEEEEEeecCCCceeeEEE
Q 003874 12 PENLQGGILLDQLYQVSPCDLNTFLFAPDSQFRKDLAELQGTKDVQEGPWEWKSGEMTCLTRAVSYMKAATKLVKAVKAT 91 (790)
Q Consensus 12 ~~~~~g~~~~~~~~~~~~~~l~~llf~~~s~f~~~~~~~~~~~~~~~~~w~~~~~~~~~~~R~~~y~~~~~~~~k~~~~~ 91 (790)
|.+-+-...+-+++++|++++|.++=..+ .++.....=+..++..++|. . -| -.|.++|.-... + ..+.
T Consensus 73 ~~~~~~~~~v~~~I~ApadkVW~lv~Df~--~pk~w~p~I~s~el~eGdg~-g-vG---SVR~lt~~~G~p--~--~~vk 141 (223)
T 3qrz_A 73 VGPDQCCSSVVQMIHAPPESVWALVRRFD--NPKVYKNFIRQCRIVQGDGL-H-VG---DLREVMVVSGLP--A--VSST 141 (223)
T ss_dssp CCTTCEEECCCCCCSSCHHHHHHHHHCCS--SGGGTCSSCCCCCCCC---C-C-SS---CCCCCCC---CC--C--CCCC
T ss_pred CCCCeEEEEEEEEEcCCHHHHHHHHhCCC--ChhHcchhcCEEEEEcCCCC-C-CC---eEEEEEecCCCc--c--ceEE
Confidence 34445556677889999999999864322 23333333344555556652 1 11 258888873321 1 1222
Q ss_pred EEEEEEeeCCceEEEEEeeeCCCCCCCCeeEEEEEEEEecCCCCCCCCCccEEEEEEEEEEeeeeeeeeeeeccccccHH
Q 003874 92 EQQTYLKANGQEFAILVTVSTPDVPYGNTFNVQLLYKIIPGPELSSGEDSSHLIISWGIDFHQSTMMRGMIEGGARQGLK 171 (790)
Q Consensus 92 e~q~~~~~~~~~~~v~~~~~tpdVP~g~~F~v~~~y~~~~~~~~~~~~~~~~l~vs~~i~~~~~~~~K~~Ie~~~~~G~~ 171 (790)
| .+...|.....+.-++.-.|+|..++=.+ ..+.| .++..|++.-++ .|. ...|.=+..+..-+.
T Consensus 142 E--rLe~iDde~~~~sYsIieG~~p~~~Y~st---ikV~p-----~~dGGT~V~Ws~--~f~---pp~g~~~e~a~~~v~ 206 (223)
T 3qrz_A 142 E--RLEILDEERHVISFSVVGGDHRLKNYRSV---TTLHA-----SDDEGTVVVESY--IVD---VPPGNTEEETLSFVD 206 (223)
T ss_dssp C--CCSEEETTTTEEECCCTTCSSSCCCCCCE---EEC-------------CCEEEE--EEC---SCSSSCSTTHHHHHH
T ss_pred E--EEEEEeccCCEEEEEEEeCCCccccEEEE---EEEEE-----cCCCCEEEEEEE--EEE---cCCCCCHHHHHHHHH
Confidence 3 33344545555555555678888776655 55663 334566654443 442 123333334444445
Q ss_pred HHHHHHHHHHHhh
Q 003874 172 ESFEQFANLLAQN 184 (790)
Q Consensus 172 ~~~~~~~~~l~~~ 184 (790)
..|+.-...|++.
T Consensus 207 ~~y~~gL~~Lk~~ 219 (223)
T 3qrz_A 207 TIVRCNLQSLARS 219 (223)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHH
Confidence 5555555555544
No 123
>1xuv_A Hypothetical protein MM0500; alpha-beta protein, northeast structural genomics consortium, NESG, structural genomics; 2.10A {Methanosarcina mazei GO1} SCOP: d.129.3.5
Probab=21.63 E-value=4.7e+02 Score=23.96 Aligned_cols=141 Identities=14% Similarity=0.119 Sum_probs=66.7
Q ss_pred eeccccCCCHHHHhhhccCchHHHHHHHHcCCc-ceeecCcccCCCCceEEEEEEEecccccCCCceeceEEEEeecCCC
Q 003874 621 VYNAELPISVKALMEMFDGGKLEHQVMEKSGCH-NYVTTPWDLVKPGVCERHLSYRFNRHVSIFGGEVTCTQQKSPLASG 699 (790)
Q Consensus 621 v~~~~~p~s~~~lf~lF~~~~f~~~~~~~~g~~-d~~~~~W~~~~~~~~~R~~sY~~n~~i~~~~~~vt~~Q~~~~~~~~ 699 (790)
.++..|++|++.+|+.+.|.+.+.+++--.+.+ .....++. .|+. +.|....|- |........+......
T Consensus 25 ~~~r~i~Ap~e~Vw~altdpe~~~~W~~~~~~~~~~~~~d~~---~Gg~---~~~~~~~~~---G~~~~~~~~v~e~~p~ 95 (178)
T 1xuv_A 25 IITREFDAPRELVFKAFTDPDLYTQWIGPRGFTTALKIFEPK---NGGS---WQYIQKDPE---GNEYAFHGVNHDVTEP 95 (178)
T ss_dssp EEEEEESSCHHHHHHHHHCHHHHTTTCSSTTCEEEEEEECCS---TTCE---EEEEEECTT---SCEEEEEEEEEEEETT
T ss_pred EEEEEECCCHHHHHHHhCCHHHHHhCCCCCCccceEEEEecc---cCCE---EEEEEECCC---CCEEEEEEEEEEEeCC
Confidence 345578999999999998877665554211111 01111222 2332 444432222 2222222234444555
Q ss_pred CcEEEEEEEecCCCCCCCceEEEEEEEEEecCCCCCccEEEEEEEEEEecccchhhhhhhhhHHhHHHHHHHHHHHHH
Q 003874 700 EGWIVNEVMSLHDVPFDDHFRVHFRYEIEKSPLAHNACKCAIYIGISWLKSTKFQQRITQNITEKFTHRLKEMIELVE 777 (790)
Q Consensus 700 ~~~vv~~~~t~~dVPygd~F~v~~ry~i~~~~~~~~~c~l~V~~~V~w~Kst~~K~~Iek~~~~g~~~~~k~~~~~~~ 777 (790)
..++..-.. .+-|..+. .....|.|+..+ .++|+|.+... |...-.....+..+...|....+..|-.+++
T Consensus 96 ~rl~~~~~~--~~~~~~~~-~~~v~~~l~~~~--~ggT~lt~~~~--~~~~~~~~~~~~~~~~~Gw~~~L~~Lk~~le 166 (178)
T 1xuv_A 96 ERIISTFEF--EGLPEKGH-VILDTARFEALP--GDRTKLTSHSV--FQTIEDRDGMLQSGMEEGINDSYERLDELLE 166 (178)
T ss_dssp TEEEEEEEE--TTSSSSCC-CEEEEEEEEEET--TTEEEEEEEEE--CSSHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred CEEEEEEEe--cCCCCCCC-cEEEEEEEEEcC--CCCEEEEEEEE--eCCHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 666555332 23343121 244567777765 36888887655 4321112233333334444444444444443
No 124
>1w7p_D VPS36P, YLR417W; ESCRT-II complex, endosomal protein sorting, protein transpo; 3.60A {Saccharomyces cerevisiae} SCOP: a.4.5.54 a.4.5.54
Probab=21.42 E-value=20 Score=40.83 Aligned_cols=52 Identities=19% Similarity=0.346 Sum_probs=0.0
Q ss_pred CceEEEeccEEEEEeccCCCeEEEEEecccceeeEEccccccccCCCcEEEEEE
Q 003874 484 QGRLFLSARIVGFYANLFGNKTKFFFLWEDIEDIQILSPSLATVGSPSLVIILW 537 (790)
Q Consensus 484 ~Grlyis~~~icF~s~~~g~~t~~~i~~~dI~~I~k~~~~~~~~~~~~i~i~l~ 537 (790)
.|++|+|.+.|||-.+....+..+.|+++||..++...+.+. -+|-|+++++
T Consensus 44 ~G~~yLTShRiiyvD~~~p~~~s~~l~L~~I~~~e~~agflk--sSpKI~L~l~ 95 (566)
T 1w7p_D 44 RGRIFLTSQRIIYIDDAKPTQNSLGLELDDLAYVNYSSGFLT--RSPRLILFFK 95 (566)
T ss_dssp ------------------------------------------------------
T ss_pred CceEEEEeeeEEEecCCCCcceEEEEEhHHcceeeeeecccc--CCCceEEeec
Confidence 399999999999966655556778999999999998764331 2356666654
Done!