Query 003875
Match_columns 790
No_of_seqs 210 out of 1154
Neff 4.1
Searched_HMMs 46136
Date Thu Mar 28 13:35:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003875.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/003875hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2099 Glycogen phosphorylase 100.0 5E-246 1E-250 1983.8 44.8 678 1-790 148-835 (843)
2 TIGR02093 P_ylase glycogen/sta 100.0 1E-226 3E-231 1921.6 58.1 670 1-784 117-794 (794)
3 PF00343 Phosphorylase: Carboh 100.0 1E-227 3E-232 1914.2 43.3 671 1-786 37-713 (713)
4 PRK14985 maltodextrin phosphor 100.0 4E-225 8E-230 1908.2 57.3 666 1-785 126-797 (798)
5 cd04300 GT1_Glycogen_Phosphory 100.0 2E-224 5E-229 1908.4 59.0 670 1-784 120-797 (797)
6 PRK14986 glycogen phosphorylas 100.0 3E-222 6E-227 1889.8 60.4 673 1-789 137-815 (815)
7 COG0058 GlgP Glucan phosphoryl 100.0 1E-183 2E-188 1556.5 42.2 614 1-786 128-750 (750)
8 cd04299 GT1_Glycogen_Phosphory 100.0 2E-126 5E-131 1101.9 41.0 541 1-782 119-688 (778)
9 TIGR02094 more_P_ylases alpha- 100.0 6E-122 1E-126 1044.9 39.5 542 1-783 32-600 (601)
10 cd03791 GT1_Glycogen_synthase_ 99.8 3.5E-17 7.6E-22 178.8 23.9 267 388-780 199-473 (476)
11 TIGR02095 glgA glycogen/starch 99.7 6.8E-16 1.5E-20 170.2 22.4 266 388-779 194-468 (473)
12 PRK14098 glycogen synthase; Pr 99.6 3.5E-14 7.7E-19 159.4 24.8 268 388-782 209-483 (489)
13 PRK00654 glgA glycogen synthas 99.6 3.4E-14 7.4E-19 157.3 19.6 264 389-779 187-458 (466)
14 PRK14099 glycogen synthase; Pr 99.3 3.8E-11 8.3E-16 135.0 19.8 267 389-782 199-476 (485)
15 PLN02939 transferase, transfer 99.3 1.1E-10 2.4E-15 139.7 20.7 270 388-782 682-964 (977)
16 PLN02316 synthase/transferase 98.7 5.2E-07 1.1E-11 110.0 20.6 176 427-659 786-961 (1036)
17 COG0297 GlgA Glycogen synthase 97.7 0.00038 8.1E-09 79.9 14.0 271 388-779 197-473 (487)
18 cd03821 GT1_Bme6_like This fam 97.1 0.0049 1.1E-07 62.4 11.5 131 509-668 199-329 (375)
19 TIGR02149 glgA_Coryne glycogen 97.0 0.0088 1.9E-07 63.5 13.4 132 509-668 197-329 (388)
20 TIGR03449 mycothiol_MshA UDP-N 97.0 0.013 2.8E-07 63.2 14.4 136 509-668 215-351 (405)
21 cd03793 GT1_Glycogen_synthase_ 97.0 0.029 6.4E-07 66.0 18.1 203 395-649 222-506 (590)
22 PLN00142 sucrose synthase 96.9 0.011 2.4E-07 71.7 14.5 145 504-669 564-716 (815)
23 TIGR02470 sucr_synth sucrose s 96.9 0.015 3.2E-07 70.5 15.4 145 503-668 540-692 (784)
24 PF00534 Glycos_transf_1: Glyc 96.9 0.0028 6.1E-08 60.0 7.4 133 508-669 10-142 (172)
25 cd01635 Glycosyltransferase_GT 96.9 0.0026 5.7E-08 60.4 7.2 120 518-667 109-229 (229)
26 cd03813 GT1_like_3 This family 96.8 0.015 3.3E-07 65.5 13.2 123 510-659 290-412 (475)
27 cd03808 GT1_cap1E_like This fa 96.7 0.012 2.7E-07 58.9 11.0 129 510-669 185-313 (359)
28 cd03805 GT1_ALG2_like This fam 96.7 0.012 2.7E-07 62.5 11.1 148 509-674 207-354 (392)
29 cd03792 GT1_Trehalose_phosphor 96.6 0.048 1E-06 58.5 15.2 124 509-655 186-311 (372)
30 cd03800 GT1_Sucrose_synthase T 96.6 0.026 5.6E-07 59.5 12.7 134 509-667 216-350 (398)
31 cd03807 GT1_WbnK_like This fam 96.4 0.041 8.8E-07 55.6 12.2 127 509-668 189-315 (365)
32 cd03818 GT1_ExpC_like This fam 96.3 0.032 6.9E-07 60.6 11.8 137 509-668 207-349 (396)
33 cd03796 GT1_PIG-A_like This fa 96.2 0.031 6.8E-07 60.8 11.1 134 510-674 190-323 (398)
34 cd03801 GT1_YqgM_like This fam 96.2 0.11 2.5E-06 51.8 14.0 131 509-669 195-325 (374)
35 TIGR02472 sucr_P_syn_N sucrose 96.2 0.068 1.5E-06 59.6 13.6 139 509-668 244-389 (439)
36 PRK15427 colanic acid biosynth 96.2 0.087 1.9E-06 58.5 14.3 129 512-668 221-353 (406)
37 cd04962 GT1_like_5 This family 96.2 0.063 1.4E-06 56.3 12.5 126 509-667 193-318 (371)
38 TIGR02468 sucrsPsyn_pln sucros 96.1 0.052 1.1E-06 67.6 12.9 186 509-784 475-671 (1050)
39 cd03822 GT1_ecORF704_like This 96.0 0.076 1.7E-06 54.4 12.1 134 510-668 182-317 (366)
40 cd03809 GT1_mtfB_like This fam 95.9 0.096 2.1E-06 53.7 12.1 120 510-656 192-311 (365)
41 PRK15484 lipopolysaccharide 1, 95.9 0.15 3.2E-06 55.9 14.0 136 509-667 189-325 (380)
42 TIGR03088 stp2 sugar transfera 95.8 0.13 2.9E-06 54.7 12.9 130 510-667 191-320 (374)
43 cd03795 GT1_like_4 This family 95.7 0.028 6.1E-07 58.0 7.5 129 510-669 188-316 (357)
44 cd04949 GT1_gtfA_like This fam 95.6 0.051 1.1E-06 57.7 9.0 166 514-776 205-371 (372)
45 cd05844 GT1_like_7 Glycosyltra 95.4 0.22 4.7E-06 52.3 12.9 128 513-668 188-319 (367)
46 PLN02949 transferase, transfer 95.3 0.25 5.4E-06 56.6 13.9 136 512-667 267-406 (463)
47 cd03819 GT1_WavL_like This fam 95.3 0.076 1.7E-06 55.1 9.0 133 509-668 181-313 (355)
48 PRK15490 Vi polysaccharide bio 95.3 0.22 4.7E-06 58.8 13.5 128 510-669 395-522 (578)
49 cd03794 GT1_wbuB_like This fam 95.2 0.17 3.7E-06 51.4 10.9 129 510-668 217-348 (394)
50 cd03811 GT1_WabH_like This fam 94.9 0.073 1.6E-06 53.2 7.2 130 509-670 185-314 (353)
51 cd03799 GT1_amsK_like This is 94.8 0.075 1.6E-06 54.9 7.1 131 511-669 177-311 (355)
52 cd03817 GT1_UGDG_like This fam 94.8 0.15 3.2E-06 51.9 9.0 132 509-670 198-329 (374)
53 cd03804 GT1_wbaZ_like This fam 94.6 0.08 1.7E-06 55.9 6.8 113 515-668 197-309 (351)
54 cd03825 GT1_wcfI_like This fam 94.3 0.5 1.1E-05 49.0 11.7 123 509-667 187-312 (365)
55 TIGR02918 accessory Sec system 94.2 0.73 1.6E-05 53.3 14.1 122 514-668 320-442 (500)
56 cd03812 GT1_CapH_like This fam 93.5 0.37 7.9E-06 50.1 9.1 120 509-658 188-307 (358)
57 PLN02871 UDP-sulfoquinovose:DA 93.5 0.42 9.1E-06 53.7 10.2 124 510-669 260-384 (465)
58 cd03820 GT1_amsD_like This fam 93.4 0.81 1.8E-05 45.8 11.1 124 512-667 177-301 (348)
59 cd03814 GT1_like_2 This family 93.3 0.91 2E-05 46.5 11.4 121 510-667 194-314 (364)
60 cd03806 GT1_ALG11_like This fa 93.1 0.62 1.3E-05 52.1 10.7 143 512-674 236-382 (419)
61 cd03798 GT1_wlbH_like This fam 92.5 0.48 1E-05 47.7 8.0 129 509-667 198-326 (377)
62 cd04955 GT1_like_6 This family 92.4 1.3 2.9E-05 46.0 11.4 113 515-656 195-307 (363)
63 cd03823 GT1_ExpE7_like This fa 91.8 0.86 1.9E-05 46.4 9.0 125 511-669 189-313 (359)
64 PRK15179 Vi polysaccharide bio 90.9 0.66 1.4E-05 56.0 8.2 127 511-669 515-641 (694)
65 cd03802 GT1_AviGT4_like This f 90.7 0.88 1.9E-05 46.9 7.9 122 515-669 173-294 (335)
66 PRK10307 putative glycosyl tra 90.3 2.6 5.7E-05 46.1 11.5 126 509-668 225-356 (412)
67 cd03816 GT1_ALG1_like This fam 89.5 1.9 4.1E-05 48.0 9.7 141 511-675 230-372 (415)
68 cd04946 GT1_AmsK_like This fam 89.4 4.1 8.9E-05 45.3 12.3 129 512-668 229-359 (407)
69 PHA01630 putative group 1 glyc 87.6 2.5 5.5E-05 46.3 9.0 118 513-669 142-259 (331)
70 cd03788 GT1_TPS Trehalose-6-Ph 86.4 15 0.00033 42.0 14.7 132 511-652 262-400 (460)
71 PHA01633 putative glycosyl tra 82.0 16 0.00034 40.8 12.0 122 511-667 146-270 (335)
72 TIGR03087 stp1 sugar transfera 78.4 18 0.00038 39.7 10.9 109 511-650 222-331 (397)
73 cd04951 GT1_WbdM_like This fam 78.1 5.8 0.00013 41.1 6.8 125 509-667 184-308 (360)
74 TIGR02400 trehalose_OtsA alpha 77.2 1.1E+02 0.0024 35.4 17.2 134 512-655 258-398 (456)
75 PF13692 Glyco_trans_1_4: Glyc 76.1 6.3 0.00014 35.8 5.7 103 512-650 1-104 (135)
76 PLN02275 transferase, transfer 72.8 21 0.00046 39.1 9.7 142 514-674 214-363 (371)
77 PF08323 Glyco_transf_5: Starc 69.0 4.1 8.8E-05 42.8 3.0 103 94-234 73-177 (245)
78 PRK09922 UDP-D-galactose:(gluc 65.6 28 0.0006 37.6 8.6 125 514-669 181-308 (359)
79 PRK10125 putative glycosyl tra 41.7 71 0.0015 36.1 7.1 55 610-669 301-355 (405)
80 PLN02501 digalactosyldiacylgly 40.1 1E+02 0.0022 38.4 8.4 118 517-669 550-667 (794)
81 PF14474 RTC4: RTC4-like domai 38.8 25 0.00053 34.1 2.6 32 194-225 85-117 (124)
82 COG0438 RfaG Glycosyltransfera 36.3 2.5E+02 0.0055 27.4 9.2 124 514-668 200-325 (381)
83 cd00127 DSPc Dual specificity 31.4 1E+02 0.0022 28.5 5.3 38 181-222 81-121 (139)
84 TIGR02398 gluc_glyc_Psyn gluco 26.5 5.3E+02 0.012 30.6 11.1 140 498-655 275-424 (487)
85 smart00195 DSPc Dual specifici 26.2 1.4E+02 0.0031 27.8 5.4 40 180-223 77-119 (138)
86 PLN02846 digalactosyldiacylgly 26.0 1.9E+02 0.0041 34.0 7.4 119 516-669 231-349 (462)
87 PRK14501 putative bifunctional 23.6 4.1E+02 0.0089 32.6 9.9 135 512-656 264-405 (726)
88 KOG0853 Glycosyltransferase [C 22.9 2.2E+02 0.0048 34.0 7.2 148 509-672 269-418 (495)
89 PF00782 DSPc: Dual specificit 21.2 1.4E+02 0.0029 27.7 4.2 38 181-222 73-113 (133)
90 COG4301 Uncharacterized conser 20.4 1.3E+02 0.0027 33.5 4.2 65 702-771 165-235 (321)
No 1
>KOG2099 consensus Glycogen phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=4.9e-246 Score=1983.76 Aligned_cols=678 Identities=55% Similarity=0.967 Sum_probs=657.0
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCCCCeeeecCceEEEEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVA 80 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~ 80 (790)
|||||+|+|||||||+||+|+|+|.+|||+|.||+||+.|||||+.|+++++||+|||+|+..++| .+|++++.|.|+|
T Consensus 148 MATlglpA~GYGlRYeyGiF~QkI~~g~Q~E~~ddWL~~gnPWE~~R~e~~lPV~FyGkV~~~~~g-~kWid~q~V~A~~ 226 (843)
T KOG2099|consen 148 MATLGLPAYGYGLRYEYGIFKQKITDGWQVEEPDDWLRYGNPWEKARPEVMLPVHFYGKVEHTPDG-SKWIDTQVVLAMP 226 (843)
T ss_pred HhhcCCccccccceeehhhHHHHhcCCccccchHHHHHcCCchhhcCcceEeEEEEEEEEEeCCCc-ceeecceeEEEec
Confidence 899999999999999999999999999999999999999999999999999999999999988888 5799999999999
Q ss_pred EeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhhchH
Q 003875 81 YDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASL 160 (790)
Q Consensus 81 yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~sasl 160 (790)
||+|||||+|++||+||||+|+ ++++|||..||.|||.+|+.+++.+|+||.||||||+..+||+||||||||+|+|||
T Consensus 227 YD~PvPGyk~n~vntlRLWsak-a~~df~l~~fN~Gdy~~av~~~~~AenI~~VLYPnDnf~eGKeLRLKQqyf~caAtL 305 (843)
T KOG2099|consen 227 YDTPVPGYKNNTVNTLRLWSAK-APNDFDLKDFNVGDYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQQYFLCAATL 305 (843)
T ss_pred cCCCCCCcccCcceeeeeeccC-CCCCCCHHhccCchHHHHHHHHHhhhhceEEecCCCccccchhhhhhhhhhhhHHHH
Confidence 9999999999999999999999 777999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcc-----cccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCccc
Q 003875 161 QDIIARFEKRSGAN-----VNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEAL 235 (790)
Q Consensus 161 qdiirrf~~~~gG~-----~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpeal 235 (790)
|||||||+++.+|. .+|++||+|++||||||||+||||||||+|||.+||+|++||+||++||+|||||+|||||
T Consensus 306 qDIirRFk~sk~~~r~~~~~~~~~FPdkVAiQlNDTHPtLaIpELmRiLvD~e~l~W~~AWdit~kT~AYTNHTVlpEAL 385 (843)
T KOG2099|consen 306 QDIIRRFKSSKFGCREPVRTNFEEFPDKVAIQLNDTHPTLAIPELMRILVDLEGLDWDKAWDITQKTCAYTNHTVLPEAL 385 (843)
T ss_pred HHHHHHHhhcccCcccccccchhhCcHhheeeccCCCccccHHHHHHHHHhcccCCHHHHHHHhhhheeeccccccHHHH
Confidence 99999999888763 3599999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCccc
Q 003875 236 EKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDEL 315 (790)
Q Consensus 236 Ekw~~~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (790)
|+||++||++||||||||||+||.+|++.+.++||+ |.+++++||||+
T Consensus 386 ErWp~~L~e~LLPRHleIIy~In~~~l~~i~~~fp~-----D~drlrrmsiie--------------------------- 433 (843)
T KOG2099|consen 386 ERWPVSLMEKLLPRHLEIIYEINQRFLQTVAAKFPG-----DVDRLRRMSIIE--------------------------- 433 (843)
T ss_pred HHhhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHCCC-----cHHHHhhhhhhh---------------------------
Confidence 999999999999999999999999999999999998 999999999988
Q ss_pred ccccCCCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeee
Q 003875 316 ENCDEEGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANL 395 (790)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~L 395 (790)
++ ++++++|||+|
T Consensus 434 -----------------------------------------------------------------e~--~~~k~i~MA~L 446 (843)
T KOG2099|consen 434 -----------------------------------------------------------------EN--SPEKRINMAHL 446 (843)
T ss_pred -----------------------------------------------------------------cC--Cccceeeeeee
Confidence 20 24579999999
Q ss_pred eeccCcchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhh
Q 003875 396 CVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRK 475 (790)
Q Consensus 396 al~~S~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~ 475 (790)
||+|||+|||||+|||+|+|+.+|+||+++||+||+||||||||||||.+|||.|++||+++||+ +|++|+++|.+|++
T Consensus 447 ~ivgsHaVNGVa~iHSeilK~~~F~Df~e~~P~KFqNkTNGITPRRWL~~cnP~LadlI~e~ige-~~i~dl~~l~~L~~ 525 (843)
T KOG2099|consen 447 CIVGSHAVNGVAEIHSEILKQSVFKDFYELEPEKFQNKTNGITPRRWLLLCNPGLADLITEKIGE-EWITDLDQLTKLRK 525 (843)
T ss_pred eeecccccccHHHHHHHHHHHHHHHHHHHhChHHhccccCCcCHHHHHHhcCchHHHHHHHHhhh-HhhhhHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999995 99999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhcccc
Q 003875 476 FADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFV 555 (790)
Q Consensus 476 ~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~ 555 (790)
+++|++|+++|+++|++||.+|++||++.+|+.++|+||||+|||||||||||+|||||+|+||++||+ +|. +.++
T Consensus 526 ~a~d~~f~~~~a~vK~~NKlk~a~~le~e~~v~inp~smFDiqVKRIHEYKRQllN~l~vi~~y~riK~-e~~---k~fv 601 (843)
T KOG2099|consen 526 FADDEEFQREWAKVKQENKLKLAAYLEKEYGVKINPSSMFDIQVKRIHEYKRQLLNCLHVIYLYNRIKE-EPA---KAFV 601 (843)
T ss_pred hcccHHHHHHHHHHHHhhHHHHHHHHHHHhCcccCcchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhh-hhh---hccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 555 4489
Q ss_pred CeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccc
Q 003875 556 PRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNM 635 (790)
Q Consensus 556 P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnM 635 (790)
||++||||||+|+|+|||.|||||++||++|||||.|+++|||||||||+||+||+||||+|||+||||||+||||||||
T Consensus 602 prtvm~GGKaapgY~mAK~Iiklit~V~dvVN~Dp~vgd~LKViFl~nY~Vs~AE~iIPasdLSe~ISTAGtEASGT~NM 681 (843)
T KOG2099|consen 602 PRTVMIGGKAAPGYHMAKLIIKLITAVADVVNNDPEVGDRLKVIFLENYRVSLAEKIIPASDLSEQISTAGTEASGTGNM 681 (843)
T ss_pred ceEEEEcCccCchhHHHHHHHHHHHHHHHHhcCChhhhheeEEEEecCcccchhhhccchHHHHHHhhhccccccCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccceEeeecccccchhcccccCcceeecccchhhhhhhhhhc--CCCCCCCChhHHHHHHHHhcCCCCCcc---HH
Q 003875 636 KFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKER--SEGKFVPDARFEEVKKFVKSGVFGSYN---YD 710 (790)
Q Consensus 636 KfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~--~~~~~~~~~~~~~v~~~i~~g~f~~~~---~~ 710 (790)
||||||||+|||||||||||+||+|+||+||||+++++|..|++++ ....|.++|++++|+++|.+|.|++++ |+
T Consensus 682 KF~lNG~l~IGTlDGANVEm~eE~GeeN~FiFG~~~e~V~~L~k~gy~a~~~~~~~P~l~~v~~~i~sG~Fsp~~pd~fk 761 (843)
T KOG2099|consen 682 KFMLNGALTIGTLDGANVEMAEEAGEENFFIFGMRVEDVEALRKKGYNAQEYYDPLPELKQVIDQIESGFFSPKNPDEFK 761 (843)
T ss_pred eEEecCeEEEecccccchHHHHHcCcccEEEecccHHHHHHHHhhcccccccCCCCchHHHHHHHHhcCccCCCCchHHH
Confidence 9999999999999999999999999999999999999999999996 334578999999999999999999876 88
Q ss_pred HHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhcccccCCC
Q 003875 711 ELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 790 (790)
Q Consensus 711 ~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i~p~~~p 790 (790)
+|.++|.++ |+|+|++||+||++||++|++.|+|+++|++|+|+|||.||+|||||||.|||++||+|+|++.|
T Consensus 762 d~~~~l~~h------D~f~V~~Df~sYi~~q~kVd~~y~nqk~W~~msi~niA~sgkFSSDRtI~eYa~eIWnvep~~~~ 835 (843)
T KOG2099|consen 762 DIVNMLMYH------DYFLVFADFEAYIKCQEKVDQLYRNQKEWLKMSILNIAGSGKFSSDRTIAEYAREIWNVEPSELP 835 (843)
T ss_pred HHHHhhhcc------ceEEeeCcHHHHHHHHHHHHHHHhCHHHHHHHHHHhhhcccccCccchHHHHHHHhcCCCcccCC
Confidence 999999864 99999999999999999999999999999999999999999999999999999999999998865
No 2
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=100.00 E-value=1.5e-226 Score=1921.60 Aligned_cols=670 Identities=52% Similarity=0.920 Sum_probs=646.5
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCC-CC--eeeecCceEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSD-GK--SHWIGGEDIK 77 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~-G~--~~w~~~~~v~ 77 (790)
|||||+|++||||||+||||+|+|.||||+|.||+|+..++|||++|++.+|+|+|+|+++...+ |+ .+|++++.|+
T Consensus 117 ~Atl~~P~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~~~~g~~~~~w~~~~~v~ 196 (794)
T TIGR02093 117 LATLGLPATGYGIRYEYGLFKQKIVDGWQVELPDDWLRYGNPWEIRRPDRSYEVRFGGRVELQPDSDRLRPRWVPAETVL 196 (794)
T ss_pred HHhCCCCeEEEEeeecCCceEEEEECCEEEEcCCCcCCCCCCceeecCCcEEEEEeCCEEeeeccCCcceeEeeCceEEE
Confidence 69999999999999999999999999999999999999999999999999999999999975443 64 3499999999
Q ss_pred EEEEeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhh
Q 003875 78 AVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCS 157 (790)
Q Consensus 78 A~~yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~s 157 (790)
|+|||+|||||+|+++|+||||+++ +.+.|||..||.|||.+|+++++.+|+||++|||+|++++||+|||||||||||
T Consensus 197 avpyD~pi~Gy~~~~vn~LRLW~a~-~~~~f~l~~fn~gdy~~a~~~~~~~e~It~vLYp~D~~~~Gk~lRLkQeyfl~~ 275 (794)
T TIGR02093 197 AIPYDVPVPGYRTDTVNTLRLWSAE-APEEFDLDAFNAGDYYEAVEEKNRAENISRVLYPNDSTYEGKELRLKQQYFFVS 275 (794)
T ss_pred EeecceeecCCCCCceEEEEEEEec-CccccCHhhccCccHhhhhhChhhcCccccCCcCCCCccchHHHHHHHHHHhhh
Confidence 9999999999999999999999999 577899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCccccc
Q 003875 158 ASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEK 237 (790)
Q Consensus 158 aslqdiirrf~~~~gG~~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpealEk 237 (790)
||+|||||+|++.+ .+|+.||++++|||||||||||||||||+|||++|++|++||+||+++|+||||||||||||+
T Consensus 276 aglqdiir~~~~~~---~~l~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~ 352 (794)
T TIGR02093 276 ASLQDIIRRHLETH---PDLSDFPKKVAIQLNDTHPALAIPELMRLLIDEEGMDWDEAWDITTKTFAYTNHTLLPEALEK 352 (794)
T ss_pred hHHHHHHHHHHHhC---CChhhCCcceEEEecCCchHHHHHHHHHHHHHhcCCCHHHHHHHHHhheecccCCCChHHhCC
Confidence 99999999999987 589999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCccccc
Q 003875 238 WSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELEN 317 (790)
Q Consensus 238 w~~~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (790)
||++||+++||||++||++||++|+..++..+|+ +++++.+|+||+
T Consensus 353 wp~~l~~~~Lpr~~~iI~~In~~fl~~~~~~~p~-----d~~~~~~~sii~----------------------------- 398 (794)
T TIGR02093 353 WPVDLFQKLLPRHLEIIYEINRRFLAELAAKGPG-----DEAKIRRMSIIE----------------------------- 398 (794)
T ss_pred cCHHHHHHHHhHHHHHHHHHhHHHHHHHHHhCCC-----cHHHHhheeeee-----------------------------
Confidence 9999999999999999999999999999999999 999999999998
Q ss_pred ccCCCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeee
Q 003875 318 CDEEGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCV 397 (790)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal 397 (790)
+ ++.++||||+||+
T Consensus 399 ---------------------------------------------------------------~---~~~~~v~Ma~LAi 412 (794)
T TIGR02093 399 ---------------------------------------------------------------E---GQSKRVRMANLAI 412 (794)
T ss_pred ---------------------------------------------------------------c---CCCCEEehHHHHH
Confidence 2 2234799999999
Q ss_pred ccCcchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhhcC
Q 003875 398 VGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFA 477 (790)
Q Consensus 398 ~~S~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~ 477 (790)
++||+|||||+|||+|+|+++|++|+++||+||+|||||||+|||+.+|||+|++||+++||+ +|++|++.|++|++++
T Consensus 413 ~~S~~vNGVS~lH~eilk~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~~~~ 491 (794)
T TIGR02093 413 VGSHSVNGVAALHTELLKEDLLKDFYELYPEKFNNKTNGITPRRWLRLANPGLSALLTETIGD-DWLTDLDLLKKLEPYA 491 (794)
T ss_pred HhhhhhhhhHHHHHHHHHHHHHHHHHhhCCCccCCcCCCCCccchhhhcCHHHHHHHHHhcCc-hhhhcHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999996 9999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCe
Q 003875 478 DNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPR 557 (790)
Q Consensus 478 ~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~ 557 (790)
+|++|+++|+++|++||.+|++||++++|+.+||++|||||||||||||||+||+|+|++||.+|++ +|... ++||
T Consensus 492 ~D~~f~~~l~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~~---~~P~ 567 (794)
T TIGR02093 492 DDSEFLEEFRQVKQANKQRLAAYIKEHTGVEVDPNSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKE-DPPKD---IVPR 567 (794)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCccccchhhheechhhhHHHHHHhhhHHHHHHHHh-CCCcC---CCCe
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 76643 7899
Q ss_pred EEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchh
Q 003875 558 VCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKF 637 (790)
Q Consensus 558 ~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKf 637 (790)
||||||||||+|.+||+|||+|++||++||+||+++++|||||||||+||+||+||||||||+||||||+||||||||||
T Consensus 568 ~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqistag~EASGTsnMK~ 647 (794)
T TIGR02093 568 TVIFGGKAAPGYHMAKLIIKLINSVAEVVNNDPAVGDKLKVVFVPNYNVSLAELIIPAADLSEQISTAGKEASGTGNMKF 647 (794)
T ss_pred EEEEEecCCCCcHHHHHHHHHHHHHHHHhccChhhCCceeEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCcchhHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEeeecccccchhcccccCcceeecccchhhhhhhhhhc--CCCCCCCChhHHHHHHHHhcCCCCCcc---HHHH
Q 003875 638 AMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKER--SEGKFVPDARFEEVKKFVKSGVFGSYN---YDEL 712 (790)
Q Consensus 638 amNG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~--~~~~~~~~~~~~~v~~~i~~g~f~~~~---~~~l 712 (790)
||||||||||||||||||+++||++|+|+||++++||..++..+ +...|..+|.+++|+|+|.+|+|++.+ |++|
T Consensus 648 alNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~Y~~~~~y~~~~~l~~~~d~i~~g~f~~~~~~~f~~l 727 (794)
T TIGR02093 648 MLNGALTIGTLDGANVEIREEVGAENIFIFGLTVEEVEALREKGYNPREYYEADPELKRVLDLISSGTFSPGDPGLFRPL 727 (794)
T ss_pred HhcCcceeecccchhHHHHHHhCcccEEEcCCCHHHHHHHHHcCCCchhcccCCHHHHHHHHHHhcCCCCCCCchHHHHH
Confidence 99999999999999999999999999999999999999999876 223478899999999999999998754 9999
Q ss_pred HHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhcc
Q 003875 713 MGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 784 (790)
Q Consensus 713 ~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i 784 (790)
|++|..+ +|+|||++||+||++||++|++.|+|+++|++|||.|||+||+|||||||+|||++||++
T Consensus 728 ~~~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~ 794 (794)
T TIGR02093 728 YDSLLNH-----GDPFFVLADFAAYVDAQERVDALYRDQLEWTKKSILNIANSGKFSSDRTIREYAKEIWHV 794 (794)
T ss_pred HHHHccC-----CCeeeeeccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCCCCcCCchhHHHHHHHhhCc
Confidence 9999876 799999999999999999999999999999999999999999999999999999999985
No 3
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=100.00 E-value=1.3e-227 Score=1914.17 Aligned_cols=671 Identities=51% Similarity=0.885 Sum_probs=606.5
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCCCCe-eeecCceEEEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKS-HWIGGEDIKAV 79 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~-~w~~~~~v~A~ 79 (790)
|||||+|++||||||+||+|+|+|.||+|+|.||+||..|||||++|++.+|+|+|+|++. +.+|+. +|+|+++|+|+
T Consensus 37 lAtl~~p~~GygirY~yG~F~Q~i~dG~QvE~pd~Wl~~g~pWe~~r~~~~~~V~f~G~v~-~~~~~~~~~~~~~~v~av 115 (713)
T PF00343_consen 37 LATLGIPAYGYGIRYEYGLFKQKIVDGWQVELPDNWLRYGNPWEIRRPDESYEVKFGGRVE-DDGGRKVRWEDGETVLAV 115 (713)
T ss_dssp HHHTT-EEEEEEE--SCESEEEEEETTEEEEEEEBTTTTG-TTSEEEGGGEEEEEESEEEE--EETTEEEEESCEEEEEE
T ss_pred HHhCCCCceEEEeeecCCCceeEeecCCcccCCCCccCCCCceEEecCCceEEEeccceEE-ecCCCcccccCCeEEEEE
Confidence 6899999999999999999999999999999999999999999999999999999999998 344544 59999999999
Q ss_pred EEeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhhch
Q 003875 80 AYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSAS 159 (790)
Q Consensus 80 ~yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~sas 159 (790)
|||+|||||+|++||+||||+|+ ++++|||..||.|||.+|+++++.+|+||+||||+|++++||+|||||||||||||
T Consensus 116 ~yD~pi~Gy~~~~vn~LRLw~a~-~~~~fd~~~fn~gdy~~a~~~~~~~e~is~vLYP~d~~~~Gk~LRLkQqyf~vsa~ 194 (713)
T PF00343_consen 116 PYDMPIPGYRTKTVNTLRLWSAE-PSEEFDLESFNRGDYIKAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVSAS 194 (713)
T ss_dssp EEEEEEE-SSSS-EEEEEEEEEE-ESSSTTHHHHHTTCHHHHHHHHHHHHGGGTBSS-SSSSHHHHHHHHHHHHHHHHHH
T ss_pred ecCceeecCCCCceEEEEEeccC-CCcccChhhcCCCcHHHHHHHHHHhhceeeecCCCCccccchhhhhhhHhhhhhhH
Confidence 99999999999999999999999 88899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCC
Q 003875 160 LQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWS 239 (790)
Q Consensus 160 lqdiirrf~~~~gG~~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpealEkw~ 239 (790)
||||||||++.+ .+|++||++++|||||||||||||||||+|||++||+|++||+||+++|+||||||||||||+||
T Consensus 195 lqdiir~~~~~~---~~~~~~~~~~~ihlNdtHpa~ai~ElmR~L~de~gl~~~eA~eiv~~~~~fTnHT~vpealE~wp 271 (713)
T PF00343_consen 195 LQDIIRRFKKSH---GDLREFPDKVVIHLNDTHPAFAIPELMRILMDEEGLSWDEAWEIVRKTFAFTNHTPVPEALEKWP 271 (713)
T ss_dssp HHHHHHHHHHTT---CCGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTT---HHHHHHHHHHHEEEEE--SSGGGS-EEE
T ss_pred HHHHHHHHHHhC---CChHHCCcceEEeecCCccHHHHHHHHHHHHHHcCCCHHHHHHHHHhceeeeccccccccccccC
Confidence 999999999998 69999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCccccccc
Q 003875 240 FELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCD 319 (790)
Q Consensus 240 ~~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (790)
++||+++||||+|||++||++|+..+...+|+ +.+++.+|++++
T Consensus 272 ~~l~~~~Lpr~~~ii~ein~~f~~~~~~~~~~-----d~~~~~~l~ii~------------------------------- 315 (713)
T PF00343_consen 272 VDLFERYLPRHLEIIYEINRRFLDELRRKYPG-----DEDQIRRLSIIE------------------------------- 315 (713)
T ss_dssp HHHHHHHSHHHHHHHHHHHHHHHHHHHHHSTT------HHHHHHHSSEE-------------------------------
T ss_pred HHHHHHHChHHHHHHHHHhHHHHHHHHHHhcC-----cchhhhhccccc-------------------------------
Confidence 99999999999999999999999999999998 999999999987
Q ss_pred CCCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeecc
Q 003875 320 EEGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVG 399 (790)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~ 399 (790)
+ ++++.||||+|||++
T Consensus 316 -------------------------------------------------------------~---~~~~~~~Ma~LAl~~ 331 (713)
T PF00343_consen 316 -------------------------------------------------------------E---GNSKRFRMANLALRG 331 (713)
T ss_dssp -------------------------------------------------------------T---SSSCEEEHHHHHHHC
T ss_pred -------------------------------------------------------------c---cchhhcchhHHHHHh
Confidence 2 345789999999999
Q ss_pred CcchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhhcCCC
Q 003875 400 SHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADN 479 (790)
Q Consensus 400 S~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~~d 479 (790)
||+|||||+|||+|+|+++|++|+++||+||+|||||||+|||++.|||+|++||+++||+ +|.+|++.|++|.++++|
T Consensus 332 S~~vNGVS~LH~ev~k~~~f~~f~~l~P~kf~nvTNGVh~rrWl~~~nP~L~~L~~~~iG~-~W~~d~~~l~~l~~~~dd 410 (713)
T PF00343_consen 332 SHSVNGVSKLHGEVLKQMVFKDFYELWPEKFGNVTNGVHPRRWLSQANPELSELITEYIGD-DWRTDLEQLEKLEKFADD 410 (713)
T ss_dssp ESEEEESSHHHHHHHHHTTTHHHHHHSGGGEEE----B-TCCCCCCTSHHHHHHHHHHHTS-GGGCSGGGGGGGGGGCCS
T ss_pred cccccchHHHHHHHHHHHHhhhhhhcCCceeeccccCccCcccccccCHHHHHHHHHHhcc-ccccCHHHHHHHHHhhCc
Confidence 9999999999999999999999999999999999999999999999999999999999996 999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEE
Q 003875 480 EDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVC 559 (790)
Q Consensus 480 ~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~ 559 (790)
+.|+++|+++|+++|.+|+++|++++|+.+||++|||+|||||||||||+||+|++++||.+||+ +|.. ..+||||
T Consensus 411 ~~~~~~~~~vK~~~K~rl~~~i~~~~~~~ldp~slfdv~~rR~heYKRq~LniL~ii~~y~rik~-~p~~---~~~Pv~~ 486 (713)
T PF00343_consen 411 EEFQEELREVKQENKERLAEYIKKRTGVELDPDSLFDVQARRFHEYKRQLLNILHIIDRYNRIKN-NPNK---KIRPVQF 486 (713)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSS---TTSEEEEEES-SCCCCTHHHHHHHHHHHHHHHHH-STTS---CCS-EEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchhhhhhhhhcccccccCcccccHHHHHHHHHh-cccC---CCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999998 6663 3789999
Q ss_pred EEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhc
Q 003875 560 IFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAM 639 (790)
Q Consensus 560 IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfam 639 (790)
||||||||+|.+||+|||+|++||++||+||+++++|||||||||||++|++|+||||||+||||||+||||||||||||
T Consensus 487 IFaGKAhP~d~~gK~iIk~I~~va~~in~Dp~v~~~lkVvFlenYdvslA~~lipg~DVwln~p~~p~EASGTSgMK~~~ 566 (713)
T PF00343_consen 487 IFAGKAHPGDYMGKEIIKLINNVAEVINNDPEVGDRLKVVFLENYDVSLAEKLIPGVDVWLNIPTRPKEASGTSGMKAAM 566 (713)
T ss_dssp EEE----TT-HHHHHHHHHHHHHHHHHCT-TTTCCGEEEEEETT-SHHHHHHHGGG-SEEEE---TTSSSS-SHHHHHHH
T ss_pred EEeccCCCCcHHHHHHHHHHHHHHHHHhcChhhccceeEEeecCCcHHHHHHHhhhhhhhhhCCCCCccccCCCcchhhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEeeecccccchhcccccCcceeecccchhhhhhhhhhc--CCCCCCCChhHHHHHHHHhcCCCCC---ccHHHHHH
Q 003875 640 NGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKER--SEGKFVPDARFEEVKKFVKSGVFGS---YNYDELMG 714 (790)
Q Consensus 640 NG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~--~~~~~~~~~~~~~v~~~i~~g~f~~---~~~~~l~~ 714 (790)
||+|||||||||||||.+++|++|+|+||++++||..++.++ +...|..+|++++|+|+|.+|.|++ ..|++||+
T Consensus 567 NGaL~lstlDG~niEi~e~vG~eN~fiFG~~~~ev~~~~~~gY~~~~~y~~~~~l~~vld~i~~g~f~~~~~~~f~~i~~ 646 (713)
T PF00343_consen 567 NGALNLSTLDGWNIEIAEAVGEENIFIFGLTAEEVEELRKNGYNPREYYENDPELKRVLDQIISGFFSPGDPDEFKPIYD 646 (713)
T ss_dssp TT-EEEEESSTCHHHHHHHH-GGGSEEES-BHHHHHHHHHHT-HHHHHHHHSHHHHHHHHHHHHTTTTTTSTTTTHHHHH
T ss_pred CCCeEEecccchhHHHHHhcCCCcEEEcCCCHHHHHHHHhcCCCcccccccCHHHHHHHHHHhcCCCCCCCchhHHHHHh
Confidence 999999999999999999999999999999999999999885 1223678999999999999999987 35999999
Q ss_pred HhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhcccc
Q 003875 715 SLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 786 (790)
Q Consensus 715 ~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i~p 786 (790)
+|..+ +|+|||++||+||++||++|++.|+|+++|++|+|.|||+||+|||||||+|||++||+|+|
T Consensus 647 ~~~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~d~~~W~~~~i~Nia~~g~FssDrtI~~Ya~~IW~~~p 713 (713)
T PF00343_consen 647 SLLMY-----NDEYLVLADFESYVEAQEKVDKAYRDPKKWNKMSILNIARSGKFSSDRTIREYAEDIWNVKP 713 (713)
T ss_dssp HCHHH-----TTTT-HHHHHHHHHHHHHHHHHHHCSHHHHHHHHHHHHHCGGGGBHHHHHHHHHHHTTTS--
T ss_pred CcCCC-----CCcchhhhhHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHhhCCCC
Confidence 97655 89999999999999999999999999999999999999999999999999999999999987
No 4
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=100.00 E-value=3.8e-225 Score=1908.21 Aligned_cols=666 Identities=44% Similarity=0.790 Sum_probs=646.6
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCCCCeeeecCceEEEEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVA 80 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~ 80 (790)
|||||+|++||||||+||||+|+|++|+|+|.||.|+..++|||++|++..++|+|+|+++.. +|+.+|++++.|.|+|
T Consensus 126 ~AtL~lP~~GyGirY~yG~F~Q~I~dG~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~v~~~-~G~~~w~~~~~v~avp 204 (798)
T PRK14985 126 MATVGQPATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRDSYPWFRHNEALDVQVGIGGKVTKQ-DGRERWEPAFTITGEA 204 (798)
T ss_pred HHhCCCCeEEEEeccCCCCeEEEEECCeEEECCCCcccCCCCceecCCCceEEEeeCCEEEee-CCcEEEECCEEEEEEe
Confidence 699999999999999999999999999999999999999999999999999999999999754 7888999999999999
Q ss_pred EeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhhchH
Q 003875 81 YDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASL 160 (790)
Q Consensus 81 yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~sasl 160 (790)
||+|||||+|+++|+||||++++ ..+|||..||+|||.+|++++..+|+||++|||+|++++||+|||||||||||||+
T Consensus 205 yDvpi~Gy~~~~~n~LRLW~a~~-~~~~~l~~fn~gdy~~a~en~~~~e~It~~LYp~D~~~~Gk~lRLkQEyfl~sa~v 283 (798)
T PRK14985 205 WDLPVVGYRNGVAQPLRLWQATH-AHPFDLTKFNDGDFLRAEQQGIDAEKLTKVLYPNDNHTAGKKLRLMQQYFQCACSV 283 (798)
T ss_pred ccccccCCCCCceEEEEEeEcCC-CCccCHHHcCCcchhhccccchhhcchhceecCCCCCcchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999995 55999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCCH
Q 003875 161 QDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSF 240 (790)
Q Consensus 161 qdiirrf~~~~gG~~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpealEkw~~ 240 (790)
|||||||++.+ ++|+.||++++|||||||||||||||||+|||++|++|++||+||+++|+||||||||||||+||+
T Consensus 284 qdilr~~~~~~---~~l~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~wd~Aw~iv~~~~~yTnHT~lpealE~w~~ 360 (798)
T PRK14985 284 ADILRRHHLAG---RKLHELPDYEVIQLNDTHPTIAIPELLRVLLDEHQLSWDDAWAITSKTFAYTNHTLMPEALECWDE 360 (798)
T ss_pred HHHHHHHHhcC---CChhhCCCCcEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHHheeeecCCCChhhhCCCCH
Confidence 99999999854 789999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccC
Q 003875 241 ELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDE 320 (790)
Q Consensus 241 ~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (790)
+||+++||||++||++||++|+..+...||+ +.+++.+|+||+
T Consensus 361 ~l~~~~Lpr~~~ii~~in~~fl~~~~~~~~~-----d~~~~~~~sii~-------------------------------- 403 (798)
T PRK14985 361 KLVKSLLPRHMQIIKEINTRFKTLVEKTWPG-----DKKVWAKLAVVH-------------------------------- 403 (798)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhCCC-----cHHHhhhhhhcc--------------------------------
Confidence 9999999999999999999999999999998 899999999988
Q ss_pred CCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccC
Q 003875 321 EGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGS 400 (790)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~S 400 (790)
+ ++||||+|||++|
T Consensus 404 ------------------------------------------------------------~------~~v~Ma~LAi~~S 417 (798)
T PRK14985 404 ------------------------------------------------------------D------KQVRMANLCVVSG 417 (798)
T ss_pred ------------------------------------------------------------C------CeeehHHHHHHhc
Confidence 2 3799999999999
Q ss_pred cchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhhcCCCH
Q 003875 401 HAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNE 480 (790)
Q Consensus 401 ~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~~d~ 480 (790)
|+|||||+||++|+++.||++|+++||+||+|||||||+|||+.+|||.|++||+++||+ +|+++++.|++|+++++|+
T Consensus 418 ~~vNGVS~lH~eil~~~~f~df~~l~p~kf~nvTNGVt~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~~~~~D~ 496 (798)
T PRK14985 418 FAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKTLKK-EWANDLDQLINLEKYADDA 496 (798)
T ss_pred chhHhhHHHHhchhHHhhhhhhHhhCCCccCCcCCCcCcchhhhhhCHHHHHHHHHhcCc-chhhChHHHHHhhccCCcH
Confidence 999999999999999999999999999999999999999999999999999999999997 8999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEE
Q 003875 481 DLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCI 560 (790)
Q Consensus 481 ~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~I 560 (790)
+|+++|+++|++||.+|++||++++|+.+||++|||||||||||||||+||+|+|++||.+|++ +|... ++|||||
T Consensus 497 ~f~~~~~~vK~~nK~~L~~~i~~~~g~~ldp~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~-~p~~~---~~P~~~I 572 (798)
T PRK14985 497 AFRQQYREIKQANKVRLAEFVKQRTGIEINPQAIFDVQIKRLHEYKRQHLNLLHILALYKEIRE-NPQAD---RVPRVFL 572 (798)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCccCchhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHh-CCCcC---CCCeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999998 76644 7899999
Q ss_pred EeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcc
Q 003875 561 FGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMN 640 (790)
Q Consensus 561 FaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamN 640 (790)
|||||||+|.+||+|||+|++||++||+||+++++|||||||||+|++||+||||||||+||||||+|||||||||||||
T Consensus 573 FaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~lipaaDvseqis~ag~EASGTsnMK~amN 652 (798)
T PRK14985 573 FGAKAAPGYYLAKNIIFAINKVAEVINNDPLVGDKLKVVFLPDYCVSAAELLIPAADISEQISTAGKEASGTGNMKLALN 652 (798)
T ss_pred EeecCCCCcHHHHHHHHHHHHHHHHhcCChhhCCceeEEEeCCCChHHHHHHhhhhhhhhhCCCCCccccCcchhHHHhc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEeeecccccchhcccccCcceeecccchhhhhhhhhhcCCC---CCCCChhHHHHHHHHhcCCCCCcc---HHHHHH
Q 003875 641 GCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEG---KFVPDARFEEVKKFVKSGVFGSYN---YDELMG 714 (790)
Q Consensus 641 G~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~~~~---~~~~~~~~~~v~~~i~~g~f~~~~---~~~l~~ 714 (790)
|||||||||||||||+++||++|+|+||++++||..++.++ |+ .|..+|.+++|+|+|.+|+|++.+ |++||+
T Consensus 653 GaLtlgtlDGanvEi~e~vG~eN~f~fG~~~~ev~~~~~~~-y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~i~~ 731 (798)
T PRK14985 653 GALTVGTLDGANVEIAEQVGEENIFIFGHTVEQVKALLAKG-YDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLH 731 (798)
T ss_pred CceeeecccchHHHHHHHhCcCcEEEeCCCHHHHHHHHHcC-CChhhhccCCHHHHHHHHHHhcCCCCCCCchhHHHHHH
Confidence 99999999999999999999999999999999999999876 43 377899999999999999998765 999999
Q ss_pred HhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhccc
Q 003875 715 SLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNII 785 (790)
Q Consensus 715 ~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i~ 785 (790)
+|..+ +|+|||++||+||++||++|+..|.|+++|++|+|.|||+||+|||||||+|||++||+++
T Consensus 732 ~l~~~-----~D~y~vl~Df~sY~~~q~~v~~~y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~~ 797 (798)
T PRK14985 732 SLKQG-----GDPYLVLADFAAYVEAQKQVDALYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAK 797 (798)
T ss_pred HHhhC-----CCeeEeeccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHccCCcCcHHHHHHHHHHhhCCC
Confidence 99866 7999999999999999999999999999999999999999999999999999999999985
No 5
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=100.00 E-value=2.5e-224 Score=1908.39 Aligned_cols=670 Identities=54% Similarity=0.923 Sum_probs=646.1
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCC-CCe--eeecCceEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSD-GKS--HWIGGEDIK 77 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~-G~~--~w~~~~~v~ 77 (790)
|||||+|++||||||+||||+|+|++|||+|.||+|+..++|||++|++.+|+|+|+|+++...+ |+. +|++++.|+
T Consensus 120 ~AtLglP~~G~GirY~yG~F~Q~i~~G~Q~E~pd~Wl~~~~pwe~~r~~~~~~V~f~G~~~~~~~~G~~~~~w~~~~~v~ 199 (797)
T cd04300 120 LATLGLPGYGYGIRYEYGLFKQKIVDGYQVELPDNWLRYGNPWEIRRPDVAVPVRFGGRVEHYEDGGRLRVRWVDGETVL 199 (797)
T ss_pred HHhCCCCeEEEEecccCCCeEEEEECCEEEecCCCccCCCCCceEecCCcEEEEEECCEEEEeecCCcceeeecCcceEE
Confidence 69999999999999999999999999999999999999999999999999999999999975433 644 499999999
Q ss_pred EEEEeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhh
Q 003875 78 AVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCS 157 (790)
Q Consensus 78 A~~yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~s 157 (790)
|+|||+|||||+++++|+||||+++ +...|||++||.|||.+++++++.+|+||++|||+|++++||+|||||||||||
T Consensus 200 avpyDvpi~Gy~~~~~n~LRLW~a~-~~~~~dl~~fn~gdy~~a~~~~~~~~~It~~LYp~Ds~~~Gk~lRL~Qeyfl~s 278 (797)
T cd04300 200 AVPYDTPIPGYGTNTVNTLRLWSAE-ASEEFDLDAFNRGDYIRAVEEKNRAENISKVLYPNDSTEEGKELRLKQQYFFVS 278 (797)
T ss_pred eeecceeecCCCCCceEEEEEEEee-CCCCcCHHHhcCCchhhHHhhHHHhhhhhcccCCCCCchhHHHHHHHHHHHHhh
Confidence 9999999999999999999999999 567899999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCccccc
Q 003875 158 ASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEK 237 (790)
Q Consensus 158 aslqdiirrf~~~~gG~~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpealEk 237 (790)
||+|||||+|++.+ .+++.||++++|||||||||||||||||+|||++|++|++||+||+++|+||||||||||||+
T Consensus 279 ag~qdilr~~~~~~---~~~~~l~~~~~ihlNDtHpalai~ElmR~L~d~~gl~w~~Aw~i~~~~~~yTnHT~lpealE~ 355 (797)
T cd04300 279 ASLQDIIRRFKKTH---GPLSEFPDKVAIQLNDTHPALAIPELMRILVDEEGLDWDEAWDITTKTFAYTNHTLLPEALEK 355 (797)
T ss_pred hHHHHHHHHHHHhC---CChhhCCCceEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhheeeecCCCchHHhCc
Confidence 99999999999998 478999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCccccc
Q 003875 238 WSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELEN 317 (790)
Q Consensus 238 w~~~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (790)
||++||+++||||++||++||++|+..+..++|+ +.+++.+|+||+
T Consensus 356 wp~~l~~~~lpr~~~II~~In~~~~~~~~~~~~~-----~~~~~~~l~ii~----------------------------- 401 (797)
T cd04300 356 WPVDLFERLLPRHLEIIYEINRRFLEEVRAKYPG-----DEDRIRRMSIIE----------------------------- 401 (797)
T ss_pred cCHHHHHHHChHHHHHHHHHHHHHHHHHHHhcCC-----CHHHHHhhcccc-----------------------------
Confidence 9999999999999999999999999999999998 999999999987
Q ss_pred ccCCCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeee
Q 003875 318 CDEEGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCV 397 (790)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal 397 (790)
+ ++.++||||+||+
T Consensus 402 ---------------------------------------------------------------~---~~~~~v~Ma~LAi 415 (797)
T cd04300 402 ---------------------------------------------------------------E---GGEKQVRMAHLAI 415 (797)
T ss_pred ---------------------------------------------------------------c---CCCCEEehHHHHH
Confidence 2 2235799999999
Q ss_pred ccCcchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhhcC
Q 003875 398 VGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFA 477 (790)
Q Consensus 398 ~~S~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~ 477 (790)
++||+|||||+||++|+|+++|++|+++||+||+|||||||+|||+.+|||+|++||+++||+ +|++++++|++|++++
T Consensus 416 ~~S~~vNGVS~lH~ei~k~~~~~df~~l~P~kf~n~TNGVt~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~~~~ 494 (797)
T cd04300 416 VGSHSVNGVAALHSELLKETVFKDFYELYPEKFNNKTNGITPRRWLLQANPGLSALITETIGD-DWVTDLDQLKKLEPFA 494 (797)
T ss_pred hcCcchhhhHHHHHHHHHHhhHHHHHhhCCCccCCcCCCCCcchhhhhcCHHHHHHHHHhcCc-hhhhChHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999997 9999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCe
Q 003875 478 DNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPR 557 (790)
Q Consensus 478 ~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~ 557 (790)
+|++|+++|+++|++||.+|++||++++|+.+||++|||||||||||||||+||+|+|++||.+||+ +|... ++||
T Consensus 495 ~D~~f~~~l~~~K~~nK~~L~~~i~~~~g~~ldp~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~-~p~~~---~~P~ 570 (797)
T cd04300 495 DDPAFLKEFRAIKQANKERLAAYIKKTTGVEVDPDSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKE-NPNAD---IVPR 570 (797)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccEEEEeeechhhhhhhhHHHhhHHHHHHHHh-CCCcC---CCCe
Confidence 9999999999999999999999999999999999999999999999999999999999999999998 76633 7899
Q ss_pred EEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchh
Q 003875 558 VCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKF 637 (790)
Q Consensus 558 ~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKf 637 (790)
||||||||||+|.+||.|||+|++||++||+||+++++|||||||||+||+||+||||||||+||||||+||||||||||
T Consensus 571 ~~IFaGKAaP~y~~aK~iIklI~~va~~in~Dp~v~~~lkVVFlenY~VslAe~iipaaDvseqis~ag~EASGTsnMK~ 650 (797)
T cd04300 571 TFIFGGKAAPGYYMAKLIIKLINAVADVVNNDPDVGDKLKVVFLPNYNVSLAEKIIPAADLSEQISTAGKEASGTGNMKF 650 (797)
T ss_pred EEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhcCCceEEEEeCCCChHHHHHhhhhhhhhhhCCCCCccccCCchhhH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcccceEeeecccccchhcccccCcceeecccchhhhhhhhhhcCC--CCCCCChhHHHHHHHHhcCCCCCcc---HHHH
Q 003875 638 AMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSE--GKFVPDARFEEVKKFVKSGVFGSYN---YDEL 712 (790)
Q Consensus 638 amNG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~~~--~~~~~~~~~~~v~~~i~~g~f~~~~---~~~l 712 (790)
||||||||||||||||||.++||++|+|+||++++||..+|.++.+ ..|..+|.+++|+|+|.+|.|++.+ |++|
T Consensus 651 ~lNGaltlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~y~~~~~y~~~~~l~~v~d~i~~g~f~~~~~~~f~~i 730 (797)
T cd04300 651 MLNGALTIGTLDGANVEIAEEVGEENIFIFGLTAEEVEALRANGYYPADYYEADPELRRVLDQIASGFFSPGDPGEFRPL 730 (797)
T ss_pred HhcCceeeecccchhHHHHHHhCcCcEEEeCCCHHHHHHHHHcCCChHhhccCCHHHHHHHHHHhcCCCCCCCcHHHHHH
Confidence 9999999999999999999999999999999999999999988733 2478999999999999999998543 9999
Q ss_pred HHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhcc
Q 003875 713 MGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 784 (790)
Q Consensus 713 ~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i 784 (790)
|++|..+ +|+|||++||+||++||++|+..|+|+++|++|||.|||+||+|||||||+|||++||++
T Consensus 731 ~~~l~~~-----~D~y~vl~Df~~Y~~~q~~v~~~Y~d~~~W~~~~i~Nia~~G~FSsDRtI~eYa~~IW~~ 797 (797)
T cd04300 731 VDSLLNG-----NDEYLVLADFESYVDAQEKVDALYRDQEEWARKSILNIARSGKFSSDRTIREYAEDIWNV 797 (797)
T ss_pred HHHHccC-----CCeeEeeccHHHHHHHHHHHHHHccCHHHHHHHHHHHHHccCCcCCcccHHHHHHHhhCc
Confidence 9999976 899999999999999999999999999999999999999999999999999999999985
No 6
>PRK14986 glycogen phosphorylase; Provisional
Probab=100.00 E-value=2.9e-222 Score=1889.84 Aligned_cols=673 Identities=47% Similarity=0.832 Sum_probs=649.6
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCCCC-eeeecCceEEEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGK-SHWIGGEDIKAV 79 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~-~~w~~~~~v~A~ 79 (790)
|||||+|++||||||+||||+|+|.||||+|.||+|+..|+|||++|++.+++|+|+|+++.. |. .+|+++++|+|+
T Consensus 137 ~A~LglP~~G~Gi~Y~yG~F~Q~I~dG~Q~E~pd~w~~~~~pwe~~r~~~~~~V~f~g~~~~~--g~~~~w~~~~~v~av 214 (815)
T PRK14986 137 LATLGLPGRGYGIRYDYGMFKQNIVNGRQKESPDYWLEYGNPWEFKRHNTRYKVRFGGRIQQE--GKKTRWIETEEILAV 214 (815)
T ss_pred HHhCCCCeEEEEecccCCCeEEEEECCEEEEcCCCccCCCCceeEecCCcEEEEEeCCEEEec--CceeEeeCCeeEEEE
Confidence 699999999999999999999999999999999999999999999999999999999999753 63 349999999999
Q ss_pred EEeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhhch
Q 003875 80 AYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSAS 159 (790)
Q Consensus 80 ~yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~sas 159 (790)
|||+|||||+|+++|+||||+++ +.++||+..||.|+|..++++++.+|+||++|||+|++++||+|||||||||||||
T Consensus 215 pyD~pipgy~t~~vn~lRLW~a~-~~~~fd~~~fn~g~y~~a~~~~n~~e~Is~~LYp~D~~y~Gk~lRLkQEyfl~~ag 293 (815)
T PRK14986 215 AYDQIIPGYDTDATNTLRLWSAQ-ASSEINLGKFNQGDYFAAVEDKNHSENVSRVLYPDDSTYSGRELRLRQEYFLVSAT 293 (815)
T ss_pred eCCccccCCCCCceEEEEEEEee-cCcccCHhhcccccHHHHhhccchhhccccccCCCCCCcccHHHHHHHHHHhhhHH
Confidence 99999999999999999999999 67799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCC
Q 003875 160 LQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWS 239 (790)
Q Consensus 160 lqdiirrf~~~~gG~~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpealEkw~ 239 (790)
+|||||||++.+ ++|+.||++++||||||||||++|||||+|||++|++|++||+||+++|+||||||||||||+||
T Consensus 294 v~di~r~~~~~~---~~l~~l~~~v~ihlNDtHpa~~i~ElmR~L~d~~gl~~~eA~~iv~~~~~fTnHT~lpealE~w~ 370 (815)
T PRK14986 294 VQDILSRHYQLH---KTYDNLADKIAIHLNDTHPVLSIPELMRLLIDEHKFSWDDAFEVCCQVFSYTNHTLMSEALETWP 370 (815)
T ss_pred HHHHHHHHHHhC---CCHhhCCcccEEEecCCcHHHHHHHHHHHHHHhcCCCHHHHHHHHHhhEEeecccCChHHhCcCC
Confidence 999999999987 68999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCccccccc
Q 003875 240 FELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCD 319 (790)
Q Consensus 240 ~~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (790)
++||+++||||++||++||++|+..+++.||+ +.+++.+++||+
T Consensus 371 ~~l~~~~lpr~l~Ii~eIn~~fl~~~~~~~~~-----~~~~~~~~sii~------------------------------- 414 (815)
T PRK14986 371 VDMLGKILPRHLQIIFEINDYFLKTLQEQYPN-----DTDLLGRASIID------------------------------- 414 (815)
T ss_pred HHHHHHHccHhhhHHHHHHHHHHHHHHHhCCC-----cHHHHhhhhccc-------------------------------
Confidence 99999999999999999999999999999999 999999999988
Q ss_pred CCCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeecc
Q 003875 320 EEGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVG 399 (790)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~ 399 (790)
+ +++++||||+||+++
T Consensus 415 -------------------------------------------------------------~---~~~~~v~Ma~LAl~~ 430 (815)
T PRK14986 415 -------------------------------------------------------------E---SNGRRVRMAWLAVVV 430 (815)
T ss_pred -------------------------------------------------------------c---CCCCEEeeHHHHhhc
Confidence 1 112479999999999
Q ss_pred CcchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhhcCCC
Q 003875 400 SHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADN 479 (790)
Q Consensus 400 S~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~~d 479 (790)
||+|||||+||++|+++.||++|+++||+||.|||||||+|||+.+|||+|++||+++||+ +|.+++++|++|+++.+|
T Consensus 431 S~~vNGVS~lH~evl~~~~f~df~~l~P~kf~niTNGV~~rrWl~~~np~L~~Li~~~ig~-~W~~d~~~l~~l~~~~~d 509 (815)
T PRK14986 431 SHKVNGVSELHSNLMVQSLFADFAKIFPGRFCNVTNGVTPRRWLALANPSLSAVLDEHIGR-TWRTDLSQLSELKQHCDY 509 (815)
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHhhCCCcccccCCCCChhhHhhhcCHHHHHHHHHhcCc-hhhhChHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999999999999999999999997 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEE
Q 003875 480 EDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVC 559 (790)
Q Consensus 480 ~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~ 559 (790)
++|+++|+++|++||.+|+++|++++|+.+||++|||||||||||||||+||||+|++||.+|++ +|.. +++||||
T Consensus 510 ~~f~~~l~~vk~~nK~~L~~~i~~~~g~~ldp~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~-~p~~---~~~P~~~ 585 (815)
T PRK14986 510 PMVNHAVRQAKLENKKRLAEYIAQQLNVVVNPKALFDVQIKRIHEYKRQLMNVLHVITRYNRIKA-DPDA---KWVPRVN 585 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCccCcccceeeeehhhhhhhhhhHHHhhhHHHHHHHHh-CCCc---CCCCeEE
Confidence 99999999999999999999999999999999999999999999999999999999999999998 6653 3789999
Q ss_pred EEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhc
Q 003875 560 IFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAM 639 (790)
Q Consensus 560 IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfam 639 (790)
||||||||+|.+||.|||+|++||++|||||.++++|||||||||+|++||+||||||||+||||||+||||||||||||
T Consensus 586 IFaGKAaP~y~~aK~iIk~I~~va~~in~Dp~v~~~lkVVFlenY~vslAe~lipg~Dv~eqis~ag~EASGTsnMK~al 665 (815)
T PRK14986 586 IFAGKAASAYYMAKHIIHLINDVAKVINNDPQIGDKLKVVFIPNYSVSLAQLIIPAADLSEQISLAGTEASGTSNMKFAL 665 (815)
T ss_pred EEeecCCCCcHHHHHHHHHHHHHHHHhccChhhcCceeEEEeCCCCHHHHHHhhhhhhhhhhCCCCCccccCcchhhHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccceEeeecccccchhcccccCcceeecccchhhhhhhhhhc--CCCCCCCChhHHHHHHHHhcCCCCCcc---HHHHHH
Q 003875 640 NGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKER--SEGKFVPDARFEEVKKFVKSGVFGSYN---YDELMG 714 (790)
Q Consensus 640 NG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~--~~~~~~~~~~~~~v~~~i~~g~f~~~~---~~~l~~ 714 (790)
||+|||||||||||||.++||++|+|+||++++||..++.++ +...|..+|.+++++|+|.+|+|++.+ |++||+
T Consensus 666 NGaLtlgtlDG~nvEi~e~vG~eN~~~fG~~~~ev~~~~~~~Y~~~~~y~~~~~l~~~~d~i~~g~f~~~~~~~f~~i~~ 745 (815)
T PRK14986 666 NGALTIGTLDGANVEMLEHVGEENIFIFGNTAEEVEALRRQGYKPREYYEKDEELHQVLTQIGSGVFSPEEPGRYRDLVD 745 (815)
T ss_pred cCceeeeccCCchhHHHHhcCCCcEEEeCCCHHHHHHHHHcCCChhhhccCCHHHHHHHHHHhcCCCCCCCchhHHHHHH
Confidence 999999999999999999999999999999999999999876 223377899999999999999998764 999999
Q ss_pred HhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhcccccCC
Q 003875 715 SLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 789 (790)
Q Consensus 715 ~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i~p~~~ 789 (790)
+|+.+ +|+|||++||+||++||++|+..|+|+++|++|||.|||+||+|||||||+|||++||+++||+.
T Consensus 746 ~l~~~-----~D~y~vl~Df~sY~~aq~~v~~~y~d~~~W~~~~i~Nia~~G~FSsDRtI~~Ya~~IW~~~p~~~ 815 (815)
T PRK14986 746 SLINF-----GDHYQVLADYRSYVDCQDKVDELYRNQEEWTRKAMLNIANMGYFSSDRTIKEYADEIWHIDPVRL 815 (815)
T ss_pred HhccC-----CCeeEeeccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhCCCCcCCchhHHHHHHHhhCCCccCC
Confidence 99876 79999999999999999999999999999999999999999999999999999999999999874
No 7
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-183 Score=1556.50 Aligned_cols=614 Identities=46% Similarity=0.779 Sum_probs=576.1
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCCCCeeeecCceEEEEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVA 80 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~ 80 (790)
|||||+|++||||||+||||+|++.||||+|.|+.|+..|||||+.|+. + |+|
T Consensus 128 ~a~Lg~P~~G~Gl~Y~~GyF~Q~~~dG~Q~E~p~~w~~~~~pwe~~r~~------------------------~---a~~ 180 (750)
T COG0058 128 AADLGLPLTGYGLRYRYGYFRQSDVDGWQVELPDEWLKYGNPWEFLRDA------------------------E---GVP 180 (750)
T ss_pred HHhcCCCceEEEeeecCCceeeeccCCceEecchhhhccCCcceeeccc------------------------C---Cce
Confidence 6999999999999999999999999999999999999999999998751 1 479
Q ss_pred EeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhhchH
Q 003875 81 YDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASL 160 (790)
Q Consensus 81 yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~sasl 160 (790)
||+||+||+| ++|+||||+++++..+|+|..||.| ++...+|+||++|||+|+ ++|||||||||||||+
T Consensus 181 ~d~~V~g~~~-~~~~lrlW~a~~~~~~~~l~~~n~~------e~~~~~~~iT~~LYp~Ds----~elRl~Qeyfl~~agv 249 (750)
T COG0058 181 YDVPVPGYDN-RVVTLRLWQAQVGRVPLYLLDFNVG------ENKNDARNITRVLYPGDS----KELRLKQEYFLGSAGV 249 (750)
T ss_pred eeeeEEeccC-cEEEEEEEEEecCccceEeecCCCc------ccchhhhhHHhhcCCCCc----HHHHHhhhheeeeHHH
Confidence 9999999999 9999999999977768999999988 456789999999999998 8999999999999999
Q ss_pred HHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCCH
Q 003875 161 QDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSF 240 (790)
Q Consensus 161 qdiirrf~~~~gG~~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpealEkw~~ 240 (790)
|||++++..+++ +++.+++ |||||||+||+|||||+|+|++|++|++||++|+++|+||||||||||||+||+
T Consensus 250 q~I~~~~~~~~~---~~~~~~~----~lNdtHpa~~i~ElmRll~d~~g~~~~~A~~~~~~~~~yTnHTplpeale~wp~ 322 (750)
T COG0058 250 QDILARGHLEHH---DLDVLAD----HLNDTHPALAIPELMRLLIDEEGLSWDEAWEIVRKTFVYTNHTPLPEALETWPV 322 (750)
T ss_pred HHHHHHhhhccc---cccchhh----hhcCCChhHhHHHHHHHHHHHhcCCHHHHHHHHhheeeeecCCCchhhhccCCH
Confidence 999999655542 6777764 599999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccC
Q 003875 241 ELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDE 320 (790)
Q Consensus 241 ~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (790)
+||+++||||++||++||.+|+..++..+|+ + ++.++++|+
T Consensus 323 ~l~~~~lpr~~~ii~~in~~~l~~~~~~~~~-----~--~~~~~~~i~-------------------------------- 363 (750)
T COG0058 323 ELFKKLLPRHLQIIYEINARFLPEVRLLYLG-----D--LIRRGSPIE-------------------------------- 363 (750)
T ss_pred HHHHHHhhhhhhhHHHHHhhhhHHHHhhccc-----c--ccccCCccc--------------------------------
Confidence 9999999999999999999999999988887 3 555556554
Q ss_pred CCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccC
Q 003875 321 EGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGS 400 (790)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~S 400 (790)
.||||+|||+||
T Consensus 364 --------------------------------------------------------------------~v~Ma~lal~~S 375 (750)
T COG0058 364 --------------------------------------------------------------------EVNMAVLALVGS 375 (750)
T ss_pred --------------------------------------------------------------------ceehhhhhhhhh
Confidence 299999999999
Q ss_pred cchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhhcCCCH
Q 003875 401 HAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNE 480 (790)
Q Consensus 401 ~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~~d~ 480 (790)
|+|||||+||+||+|+|.|++|+++||+||+|||||||+|||+..|||.|++++++.+|. .|..+++.+.++..+++|+
T Consensus 376 ~~vNGVsklH~el~k~~~~~~~~~~~p~~i~nvTNGIt~rrWl~~~n~~L~~~~~~~ig~-~W~~~~~~l~~l~~~a~~~ 454 (750)
T COG0058 376 HSVNGVSKLHSELSKKMWFADFHGLYPEKINNVTNGITPRRWLAPANPGLADLLDEKIGD-EWLNDLDILDELLWFADDK 454 (750)
T ss_pred hhhHhHHHHHHHHHHHHHHHHhcccCccccccccCCcCCchhhhhhhHHHHHHHhhhhhh-hhhhhhhhhhHHHHhhhhH
Confidence 999999999999999999999999999999999999999999999999999999999997 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccC-eEE
Q 003875 481 DLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVP-RVC 559 (790)
Q Consensus 481 ~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P-~~~ 559 (790)
.|++.|+.+|.+||.+|++++++++|+.+||++|||+|||||||||||+||+++++++|..|++ + .+| +++
T Consensus 455 ~~~e~i~~iK~~nk~~La~~i~~~~gi~~~p~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~-d-------~~prv~~ 526 (750)
T COG0058 455 AFRELIAEIKRENKKRLAEEIADRTGIEVDPNALFDGQARRIHEYKRQLLNLLDIERLYRILKE-D-------WVPRVQI 526 (750)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCccCCCcceeeeehhhhhhhhhHHhHhhHHHHHHHHhc-C-------CCCceEE
Confidence 9999999999999999999999999999999999999999999999999999999999999985 2 234 455
Q ss_pred EEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhc
Q 003875 560 IFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAM 639 (790)
Q Consensus 560 IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfam 639 (790)
||||||||+|++||+|||+|+++|+++|+ ++|||||||||||+|++||||||||+||||||+||||||||||||
T Consensus 527 iFaGKAhP~y~~aK~iIk~I~~~a~~in~------~lkVvFl~nYdvslA~~iipa~Dvweqis~a~~EASGTsnMK~al 600 (750)
T COG0058 527 IFAGKAHPADYAAKEIIKLINDVADVINN------KLKVVFLPNYDVSLAELLIPAADVWEQIPTAGKEASGTSNMKAAL 600 (750)
T ss_pred EEeccCCCcchHHHHHHHHHHHHHHhhcc------cceEEEeCCCChhHHHhhcccccccccCCCCCccccCcCcchHHh
Confidence 99999999999999999999999999997 789999999999999999999999999999999999999999999
Q ss_pred ccceEeeecccccchhcccccCcceeecccchhhhhhhhhhcCCC---CCCCChhHHHHHHHHhcCCCCCcc---HHHHH
Q 003875 640 NGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEG---KFVPDARFEEVKKFVKSGVFGSYN---YDELM 713 (790)
Q Consensus 640 NG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~~~~---~~~~~~~~~~v~~~i~~g~f~~~~---~~~l~ 713 (790)
||+|||||||||||||.+++|++|+|+||.+++++..++.++.+. .+..++.++.+++.+.+|.|++.+ |++++
T Consensus 601 NGaltigtlDGanvEi~e~vg~~N~~~fG~~~~~v~~~~~~~~~~~~~y~~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~ 680 (750)
T COG0058 601 NGALTLGTLDGANVEIYEHVGGENGWIFGETVEEVDALRADGYDPNALYYELENEVKPVLDEIIDGRFSPGWKSRFKNLI 680 (750)
T ss_pred cCCceeeccccHHHHHHHhcCCCceEEeCCchhhHHHHHhcccccHHHHHHHhHHHHHHHHHHhcccCCcccHHHHHHHH
Confidence 999999999999999999999999999999999999999876332 245678999999999999998854 89999
Q ss_pred HHhcc-CCCCCCC-cccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhcccc
Q 003875 714 GSLEG-NEGFGQA-DYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 786 (790)
Q Consensus 714 ~~L~~-~~~~~~~-D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i~p 786 (790)
++|.. . + |+||+++||++|++||+++...|+++++|.+++|.|||.||+|||||||++||.+||++.|
T Consensus 681 ~sl~~~~-----~~dr~~~~yd~~~Y~~aq~~~~~~~~~~~~W~~~~i~nia~~g~fssDrtI~~Y~~~Iw~~~~ 750 (750)
T COG0058 681 DSLLPKF-----GTDRMMVLYDFKAYVPAQEEVDALYRDQEAWTKKAILNIANSGLFSSDRTIREYAGEIWHIGP 750 (750)
T ss_pred HHhhhcc-----CccHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHcCCCCchhHHHHHHHHhhccCC
Confidence 99984 3 4 9999999999999999999999999999999999999999999999999999999999875
No 8
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=100.00 E-value=2.2e-126 Score=1101.89 Aligned_cols=541 Identities=24% Similarity=0.400 Sum_probs=471.4
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEe-CCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCCCCeeeecCceEEEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRIT-KDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAV 79 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~-dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~ 79 (790)
+||||+|++||||+|+||||+|+|+ ||||+|.++.|...+.||+.. .+.+|+. .
T Consensus 119 asdLg~P~vgvGllY~~GyF~Q~i~~dG~Q~e~~~~~~~~~~p~~~~---------------~~~~G~~------~---- 173 (778)
T cd04299 119 ASDLGLPLVGVGLLYRQGYFRQRLDADGWQQETYPVNDFEQLPLEPV---------------RDADGEP------V---- 173 (778)
T ss_pred HHhCCCCEEEEEeCcCCCCeEEEECCCCceeecCCCcCCCCCceEEE---------------ecCCCCe------E----
Confidence 5899999999999999999999999 999999999999999999752 2345652 2
Q ss_pred EEeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhhch
Q 003875 80 AYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSAS 159 (790)
Q Consensus 80 ~yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~sas 159 (790)
...+|+||+ ++++|+|.++++ .+++++||++.+.|. ..+|.||++|||+| +++|||||||||+||
T Consensus 174 ~v~v~l~g~----~v~~rvw~~~vg--~v~lylLDtd~~~n~----~~~R~iT~~LYg~D-----~~~Rl~Qe~~Lg~ag 238 (778)
T cd04299 174 RVSVELPGR----TVYARVWKAQVG--RVPLYLLDTDIPENS----PDDRGITDRLYGGD-----QETRIQQEILLGIGG 238 (778)
T ss_pred EEEEeeCCC----ceEEEEEEEEcC--CCCEEEecCCccccc----hhhcccccCCCCCc-----HHHHHHHHHHHHHHH
Confidence 235889997 679999999975 589999999998664 45799999999998 588999999999999
Q ss_pred HHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCC
Q 003875 160 LQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWS 239 (790)
Q Consensus 160 lqdiirrf~~~~gG~~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpealEkw~ 239 (790)
+|.+ +++ | + ++.+|||||+||||+++||||+||+++|++|++||++|+.+++||||||+|+|||+||
T Consensus 239 l~~L-r~l----g----~----~pdViH~ND~Haal~~lE~~R~ll~~~g~~~~~A~e~vr~~tvFTtHTpvpqG~d~Fp 305 (778)
T cd04299 239 VRAL-RAL----G----I----KPTVYHMNEGHAAFLGLERIRELMAEGGLSFDEALEAVRASTVFTTHTPVPAGHDRFP 305 (778)
T ss_pred HHHH-HHh----C----C----CCeEEEeCCCcHHHHHHHHHHHHHHHcCCCHHHHHHhhCCeEEEecCCchHHHhhhCC
Confidence 9865 332 2 1 4679999999999999999999999989999999999999999999999999999999
Q ss_pred HHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCccccccc
Q 003875 240 FELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCD 319 (790)
Q Consensus 240 ~~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (790)
.++|+++||+|++ .+|++.+.+..+++..
T Consensus 306 ~~l~~~~~~~~~~--------------------~lgl~~~~~~~lg~e~------------------------------- 334 (778)
T cd04299 306 PDLVERYFGPYAR--------------------ELGLSRDRFLALGREN------------------------------- 334 (778)
T ss_pred HHHHHHHhhHHHH--------------------HcCCCHHHHhhhcccc-------------------------------
Confidence 9999999998764 1235777777777633
Q ss_pred CCCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeecc
Q 003875 320 EEGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVG 399 (790)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~ 399 (790)
. +++.+.|||++|||++
T Consensus 335 -------------------------------------------------------------~--~~~~~~~nM~~laL~~ 351 (778)
T cd04299 335 -------------------------------------------------------------P--GDDPEPFNMAVLALRL 351 (778)
T ss_pred -------------------------------------------------------------c--cCccCceeHHHHHHHh
Confidence 0 0123579999999999
Q ss_pred CcchHHHHHHHHHHHhhhhhhhhhhhcCCC---CcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhh--
Q 003875 400 SHAVNGVAEIHSEIVTNEVFNEFYKLWPEK---FQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELR-- 474 (790)
Q Consensus 400 S~~vNGVS~lHsei~k~~~f~~f~~l~P~k---f~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~-- 474 (790)
|++|||||+||++|+|+ ||++|+..||.+ |.+||||||+|||+ ||++.+||++++|+ +|.++++....+.
T Consensus 352 S~~vNgVS~lHg~vsr~-mf~~~~~g~p~~~~~i~~ITNGVh~~~W~---~P~~~~l~~~~~g~-~w~~~~~~~~~~~~~ 426 (778)
T cd04299 352 AQRANGVSRLHGEVSRE-MFAGLWPGFPVEEVPIGHVTNGVHVPTWV---APEMRELYDRYLGG-DWRERPTDPELWEAV 426 (778)
T ss_pred cCeeeeecHHHHHHHHH-HhhhhhccCCcccCceeceeCCcchhhhc---CHHHHHHHHHhcCc-chhhccchHHHHhhh
Confidence 99999999999999997 799999999876 99999999999999 79999999999997 8999987544444
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHHc-----------------CCcCCCCcceecccccccccccccchhhhHHH
Q 003875 475 KFADNEDLQSQFRAAKRNNKMKVVSFIKEKT-----------------GYSVSPDAMFDIQVKRIHEYKRQLMNILGIVY 537 (790)
Q Consensus 475 ~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~-----------------g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ 537 (790)
..++|+++ | ++|+++|.+|+++|++++ +..+||++|||+||||||+|||++| ||++++
T Consensus 427 ~~i~d~~l---w-~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~~~~ldpd~ltigfarRfa~YKR~~L-il~dl~ 501 (778)
T cd04299 427 DDIPDEEL---W-EVRQQLRRRLIEFVRRRLRRQWLRRGASAEEIGEADDVLDPNVLTIGFARRFATYKRATL-LLRDPE 501 (778)
T ss_pred cCCCcHHH---H-HHHHHHHHHHHHHHHHHHHhhhhhcCCchhhhhhcCCccCCCccEEeeeecchhhhhHHH-HHHHHH
Confidence 34678776 6 699999999999999886 5569999999999999999999999 999999
Q ss_pred HHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccc
Q 003875 538 RYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASE 617 (790)
Q Consensus 538 ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~D 617 (790)
||.+|++ ++ + .|+||||||||||+|.+||+|||+|+++++ ||.+.+ ||||+|||||++|++|+||||
T Consensus 502 rl~~il~-~~-~-----~pvQ~IfaGKAhP~d~~gK~iIk~i~~~a~----~p~~~~--kVvfle~Yd~~lA~~LvaG~D 568 (778)
T cd04299 502 RLKRLLN-DP-E-----RPVQFIFAGKAHPADEPGKELIQEIVEFSR----RPEFRG--RIVFLEDYDMALARHLVQGVD 568 (778)
T ss_pred HHHHHhh-CC-C-----CCeEEEEEEecCccchHHHHHHHHHHHHHh----CcCCCC--cEEEEcCCCHHHHHHHHhhhh
Confidence 9999985 43 2 399999999999999999999999999995 999999 999999999999999999999
Q ss_pred cccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecccchhhhhhhhhhcCCCCCCCChhHHHHHH
Q 003875 618 LSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKK 697 (790)
Q Consensus 618 ls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~ 697 (790)
||+|+|+||+||||||||||||||+||+|||||||.|.. ...|+|.||..... .++.
T Consensus 569 vwLn~prrp~EAsGTSgMKA~~NG~LnlSvlDGww~E~~---~g~nGwaig~~~~~--------------~~~~------ 625 (778)
T cd04299 569 VWLNTPRRPLEASGTSGMKAALNGGLNLSVLDGWWDEGY---DGENGWAIGDGDEY--------------EDDE------ 625 (778)
T ss_pred hcccCCCCCCCCCccchHHHHHcCCeeeecccCcccccc---CCCCceEeCCCccc--------------cChh------
Confidence 999999999999999999999999999999999999976 45899999984321 1111
Q ss_pred HHhcCCCCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcC-----HhHHHHHHHHHhhc-CCCCChH
Q 003875 698 FVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCD-----QKRWTRMSIMNTAG-SSKFSSD 771 (790)
Q Consensus 698 ~i~~g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d-----~~~W~~~~i~NIA~-sg~FSSD 771 (790)
..+ ..|...||+.|++ +.++.+|.. +.+|.+||..+|+. ...||++
T Consensus 626 --~~d---~~da~~Ly~~Le~-----------------------~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~ 677 (778)
T cd04299 626 --YQD---AEEAEALYDLLEN-----------------------EVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAE 677 (778)
T ss_pred --hcc---hhhHHHHHHHHHH-----------------------HHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHH
Confidence 011 2468999999984 477788874 88999999999996 5999999
Q ss_pred HHHHHHHHHhh
Q 003875 772 RTIQEYARDIW 782 (790)
Q Consensus 772 RtI~EYa~~IW 782 (790)
||++||+++.|
T Consensus 678 Rmv~eY~~~~Y 688 (778)
T cd04299 678 RMVREYVERFY 688 (778)
T ss_pred HHHHHHHHHhH
Confidence 99999999999
No 9
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=100.00 E-value=5.5e-122 Score=1044.95 Aligned_cols=542 Identities=24% Similarity=0.392 Sum_probs=471.5
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEe-CCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCCCCeeeecCceEEEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRIT-KDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAV 79 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~-dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~ 79 (790)
|||||+|++||||||+||||+|+|+ +|||+|.|++|+..+.||+.. .+.+|+ | +
T Consensus 32 aa~l~~p~~g~gl~Y~~Gyf~Q~i~~~g~Q~e~~~~~~~~~~p~~~~---------------~~~~g~--~--------~ 86 (601)
T TIGR02094 32 ASDLGLPLVAVGLLYKQGYFRQRLDEDGWQQEAYPNNDFESLPIEKV---------------LDTDGK--W--------L 86 (601)
T ss_pred HHhCCCCeEEEEeccCCCceeEEECCCCceeecCCccccCCCceEEE---------------ecCCCC--e--------E
Confidence 5899999999999999999999998 999999999999999999861 234565 2 4
Q ss_pred EEeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhhch
Q 003875 80 AYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSAS 159 (790)
Q Consensus 80 ~yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~sas 159 (790)
+|++|++| +++++|||++++ ..+++++||+++..| ...+|.||++|||+| +++|++||||||+|+
T Consensus 87 ~~~v~i~g----~~~~~rlw~~~~--~~v~lylld~~~~~n----~~~~R~it~~LY~~D-----~~~R~~Qe~fl~~a~ 151 (601)
T TIGR02094 87 KISVRIRG----RDVYAKVWRVQV--GRVPLYLLDTNIPEN----SEDDRWITGRLYGGD-----KEMRIAQEIVLGIGG 151 (601)
T ss_pred EEEEecCC----cEEEEEEEEEEe--CCCCEEEecCCCccc----chhhcCccCCCCCCC-----HHHHHHHHHHHHHHH
Confidence 89999999 489999999996 358999999998544 566899999999998 588999999999999
Q ss_pred HHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCC
Q 003875 160 LQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWS 239 (790)
Q Consensus 160 lqdiirrf~~~~gG~~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpealEkw~ 239 (790)
+|++- ..| -++.+|||||+||||+++||||+|+ ++|++|++||++|+.+++||||||+|+|+|+||
T Consensus 152 l~~l~-----~l~--------~~pdviH~ND~Htal~~~el~r~l~-~~~~~~~~a~~~~~~~~vfTiHt~~~qG~e~f~ 217 (601)
T TIGR02094 152 VRALR-----ALG--------IDPDVYHLNEGHAAFVTLERIRELI-AQGLSFEEAWEAVRKSSLFTTHTPVPAGHDVFP 217 (601)
T ss_pred HHHHH-----HcC--------CCceEEEeCCchHHHHHHHHHHHHH-HcCCCHHHHHHhcCCeEEEeCCCchHHHhhhcC
Confidence 99761 121 1778999999999999999999999 789999999999999999999999999999999
Q ss_pred HHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCccccccc
Q 003875 240 FELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCD 319 (790)
Q Consensus 240 ~~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (790)
.++|.++||| ++++..|+.+++..+..+++
T Consensus 218 ~~~~~~~~~~-~~~~~gl~~~~~~~~~~~~~------------------------------------------------- 247 (601)
T TIGR02094 218 EDLMRKYFGD-YAANLGLPREQLLALGRENP------------------------------------------------- 247 (601)
T ss_pred HHHHHHHhhh-hhhHhCCCHHHHHhhhhhcc-------------------------------------------------
Confidence 9999999998 45555666655433211111
Q ss_pred CCCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeecc
Q 003875 320 EEGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVG 399 (790)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~ 399 (790)
+..++|||+++||++
T Consensus 248 -----------------------------------------------------------------~~~~~vnm~~lai~~ 262 (601)
T TIGR02094 248 -----------------------------------------------------------------DDPEPFNMTVLALRL 262 (601)
T ss_pred -----------------------------------------------------------------CccCceeHHHHHHHh
Confidence 012579999999999
Q ss_pred CcchHHHHHHHHHHHhhhhhhhhhhhcCCC---CcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhhc
Q 003875 400 SHAVNGVAEIHSEIVTNEVFNEFYKLWPEK---FQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKF 476 (790)
Q Consensus 400 S~~vNGVS~lHsei~k~~~f~~f~~l~P~k---f~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~ 476 (790)
|++|||||++|+++++ .||++|++++|.+ |.+||||||+|+|. ||.++.|+++++|+ +|.+++++++.|+++
T Consensus 263 S~~vngVS~lh~~v~~-~l~~~l~~~~~~~~~~i~gItNGId~~~W~---~~~~~~l~~~y~~~-~w~~~~~~~~~~~~~ 337 (601)
T TIGR02094 263 SRIANGVSKLHGEVSR-KMWQFLYPGYEEEEVPIGYVTNGVHNPTWV---APELRDLYERYLGE-NWRELLADEELWEAI 337 (601)
T ss_pred CCeeeeecHHHHHHHH-HHHHhhhhhcccccCCccceeCCccccccC---CHHHHHHHHHhCCc-chhccchhhhhhhhc
Confidence 9999999999999998 6899999999987 99999999999998 79999999999997 899999999999886
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCc-----------------CCCCcceecccccccccccccchhhhHHHHH
Q 003875 477 ADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYS-----------------VSPDAMFDIQVKRIHEYKRQLMNILGIVYRY 539 (790)
Q Consensus 477 ~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~-----------------l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry 539 (790)
|....++++++|++||.+|+++|++++|+. +||+++||+||||||+||||+| ||++++||
T Consensus 338 --~~~~~~~l~~~K~~~K~~L~~~v~~~~~~~~~~~g~~~~~~~~~gl~~dpd~~~ig~v~Rl~~yKr~dL-il~~i~~l 414 (601)
T TIGR02094 338 --DDIPDEELWEVHLKLKARLIDYIRRRLRERWLRRGADAAILMATDRFLDPDVLTIGFARRFATYKRADL-IFRDLERL 414 (601)
T ss_pred --ccccHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhhccccCCCCcEEEEEEcchhhhhHHH-HHHHHHHH
Confidence 334445666899999999999999998877 9999999999999999999999 99999999
Q ss_pred HHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccc
Q 003875 540 KKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELS 619 (790)
Q Consensus 540 ~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls 619 (790)
.+|++ +|. .|+||||+|||||+|.+||++|++|+++++ +|++.+ ||+|++|||+++|++|+||||||
T Consensus 415 ~~i~~-~~~------~pvq~V~~Gka~p~d~~gk~~i~~i~~la~----~~~~~~--kv~f~~~Yd~~lA~~i~aG~Dv~ 481 (601)
T TIGR02094 415 ARILN-NPE------RPVQIVFAGKAHPADGEGKEIIQRIVEFSK----RPEFRG--RIVFLENYDINLARYLVSGVDVW 481 (601)
T ss_pred HHHhh-CCC------CCeEEEEEEecCcccchHHHHHHHHHHHHh----cccCCC--CEEEEcCCCHHHHHHHhhhheeE
Confidence 99986 432 499999999999999999999999999995 899999 99999999999999999999999
Q ss_pred cccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecccchhhhhhhhhhcCCCCCCCChhHHHHHHHH
Q 003875 620 QHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFV 699 (790)
Q Consensus 620 ~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~~i 699 (790)
+|||++|+||||||+|||||||+|++||+||||+|.. +..|+|.||...... +.
T Consensus 482 L~~Psr~~EacGtsqMka~~nGgL~~sv~DG~~~E~~---~~~nGf~f~~~~~~~--------------~~--------- 535 (601)
T TIGR02094 482 LNNPRRPLEASGTSGMKAAMNGVLNLSILDGWWGEGY---DGDNGWAIGDGEEYD--------------DE--------- 535 (601)
T ss_pred EeCCCCCcCCchHHHHHHHHcCCceeecccCcccccC---CCCcEEEECCCcccc--------------cc---------
Confidence 9999999999999999999999999999999999976 347999999742211 00
Q ss_pred hcCCCCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcC-----HhHHHHHHHHHhhcC-CCCChHHH
Q 003875 700 KSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCD-----QKRWTRMSIMNTAGS-SKFSSDRT 773 (790)
Q Consensus 700 ~~g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d-----~~~W~~~~i~NIA~s-g~FSSDRt 773 (790)
..-+..|..+||+.|+. +.++.+|.+ +..|.+||..+|+.. ..||++||
T Consensus 536 --~~~d~~da~~l~~~L~~-----------------------ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~ 590 (601)
T TIGR02094 536 --EEQDRLDAEALYDLLEN-----------------------EVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRM 590 (601)
T ss_pred --ccccCCCHHHHHHHHHH-----------------------HHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHH
Confidence 11123578999999983 244777776 556999999999964 79999999
Q ss_pred HHHHHHHhhc
Q 003875 774 IQEYARDIWN 783 (790)
Q Consensus 774 I~EYa~~IW~ 783 (790)
+++|++..|.
T Consensus 591 a~~Y~~~yy~ 600 (601)
T TIGR02094 591 VREYVDKFYL 600 (601)
T ss_pred HHHHHHHhCC
Confidence 9999998773
No 10
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.77 E-value=3.5e-17 Score=178.81 Aligned_cols=267 Identities=22% Similarity=0.299 Sum_probs=189.1
Q ss_pred CeeeeeeeeeccCcchHHHHHHHHHHHhhhh----hhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCcc
Q 003875 388 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEV----FNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW 463 (790)
Q Consensus 388 ~~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~----f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W 463 (790)
..++|...++..|..|+.||.-+.+.+.+.. +..+....+.++.-|+|||....|-....+.+...++
T Consensus 199 ~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~~~~gl~~~~~~~~~ki~~I~NGid~~~~~p~~~~~~~~~~~-------- 270 (476)
T cd03791 199 GQVNFLKAGIVYADAVTTVSPTYAREILTPEFGEGLDGLLRARAGKLSGILNGIDYDVWNPATDPHLPANYS-------- 270 (476)
T ss_pred CcccHHHHHHHhcCcCeecCHhHHHHhCCCCCCcchHHHHHhccCCeEEEeCCCcCcccCccccchhhhcCC--------
Confidence 5688989999999999999999888665421 0111222357899999999999996433322221111
Q ss_pred ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHH
Q 003875 464 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 543 (790)
Q Consensus 464 ~~~~~~l~~l~~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik 543 (790)
. + .+ ..|..+|..| +++.|...+++....+++-|+.++|+..+ ++..+.+ ++
T Consensus 271 ---------------~-~---~~-~~~~~~k~~l----~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~ 322 (476)
T cd03791 271 ---------------A-D---DL-EGKAENKAAL----QEELGLPVDPDAPLFGFVGRLTEQKGIDL-LLEALPE---LL 322 (476)
T ss_pred ---------------c-c---cc-ccHHHHHHHH----HHHcCCCcCCCCCEEEEEeeccccccHHH-HHHHHHH---HH
Confidence 0 1 13 4566666654 46778888899999999999999999888 7766554 33
Q ss_pred hcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 003875 544 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS 623 (790)
Q Consensus 544 ~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~is 623 (790)
+ .+.++++.|+..+. +.+.+.+.+... .+ +|+|+..|+-.++..+..+||+....|
T Consensus 323 ~----------~~~~lvi~G~g~~~------~~~~~~~~~~~~------~~--~v~~~~~~~~~~~~~~~~~aDv~l~pS 378 (476)
T cd03791 323 E----------LGGQLVILGSGDPE------YEEALRELAARY------PG--RVAVLIGYDEALAHLIYAGADFFLMPS 378 (476)
T ss_pred H----------cCcEEEEEecCCHH------HHHHHHHHHHhC------CC--cEEEEEeCCHHHHHHHHHhCCEEECCC
Confidence 2 13689999987542 223333333211 12 699999999999999999999999977
Q ss_pred CCccccCCCccchhhcccceEeeecccccchhcccccC----cceeecccchhhhhhhhhhcCCCCCCCChhHHHHHHHH
Q 003875 624 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGE----ENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFV 699 (790)
Q Consensus 624 tag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~----en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~~i 699 (790)
. .|++|.+.|.+|++|++.|+|--|...|+.....+ .|+|+|..
T Consensus 379 ~--~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~------------------------------ 426 (476)
T cd03791 379 R--FEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTGEGTGFVFEG------------------------------ 426 (476)
T ss_pred C--CCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCCCCCeEEeCC------------------------------
Confidence 6 69999999999999999999988888876644311 15555532
Q ss_pred hcCCCCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 003875 700 KSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYAR 779 (790)
Q Consensus 700 ~~g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~ 779 (790)
.+.++|.+.|. ++...|.+++.|.+++...++. .||-++++++|.+
T Consensus 427 -------~~~~~l~~~i~-------------------------~~l~~~~~~~~~~~~~~~~~~~--~fsw~~~a~~~~~ 472 (476)
T cd03791 427 -------YNADALLAALR-------------------------RALALYRDPEAWRKLQRNAMAQ--DFSWDRSAKEYLE 472 (476)
T ss_pred -------CCHHHHHHHHH-------------------------HHHHHHcCHHHHHHHHHHHhcc--CCChHHHHHHHHH
Confidence 22344444443 5556677899999988887664 5999999999976
Q ss_pred H
Q 003875 780 D 780 (790)
Q Consensus 780 ~ 780 (790)
-
T Consensus 473 ~ 473 (476)
T cd03791 473 L 473 (476)
T ss_pred H
Confidence 4
No 11
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.71 E-value=6.8e-16 Score=170.18 Aligned_cols=266 Identities=18% Similarity=0.280 Sum_probs=182.4
Q ss_pred CeeeeeeeeeccCcchHHHHHHHHHHHhhhhhh----hhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCcc
Q 003875 388 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFN----EFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW 463 (790)
Q Consensus 388 ~~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~f~----~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W 463 (790)
+.++|...++..|..|+.||.-+.+-+.+..+. .+....+.++.-|.|||...+|- |..... +.. .
T Consensus 194 ~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~~~~~~l~~~l~~~~~ki~~I~NGid~~~~~----p~~~~~----~~~-~- 263 (473)
T TIGR02095 194 GRVNFLKGGIVYADRVTTVSPTYAREILTPEFGYGLDGVLKARSGKLRGILNGIDTEVWN----PATDPY----LKA-N- 263 (473)
T ss_pred CchHHHHHHHHhCCcCeecCHhHHHHhcCCcCCccchhHHHhcCCCeEEEeCCCCccccC----CCCCcc----ccc-C-
Confidence 357887888899999999999887755432111 11122467899999999999994 542111 111 0
Q ss_pred ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHH
Q 003875 464 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 543 (790)
Q Consensus 464 ~~~~~~l~~l~~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik 543 (790)
+.. +.| +-|..+|.. ++++.|...+++....+++-|+.++|...+ ++..+.+ ++
T Consensus 264 ------------~~~-----~~~-~~k~~~k~~----l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~ 317 (473)
T TIGR02095 264 ------------YSA-----DDL-AGKAENKEA----LQEELGLPVDDDVPLFGVISRLTQQKGVDL-LLAALPE---LL 317 (473)
T ss_pred ------------cCc-----cch-hhhhhhHHH----HHHHcCCCccCCCCEEEEEecCccccChHH-HHHHHHH---HH
Confidence 000 113 244555544 356788887789999999999999999988 7766554 33
Q ss_pred hcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 003875 544 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS 623 (790)
Q Consensus 544 ~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~is 623 (790)
+ .+.++++.|+..|.+ .+.+.+ ++. +.+ + +|+|+..|+.+.+..++.+||+....|
T Consensus 318 ~----------~~~~lvi~G~g~~~~--~~~l~~----~~~---~~~---~--~v~~~~~~~~~~~~~~~~~aDv~l~pS 373 (473)
T TIGR02095 318 E----------LGGQLVVLGTGDPEL--EEALRE----LAE---RYP---G--NVRVIIGYDEALAHLIYAGADFILMPS 373 (473)
T ss_pred H----------cCcEEEEECCCCHHH--HHHHHH----HHH---HCC---C--cEEEEEcCCHHHHHHHHHhCCEEEeCC
Confidence 2 136899999876432 223333 332 122 2 689999999999999999999999988
Q ss_pred CCccccCCCccchhhcccceEeeecccccchhccccc----CcceeecccchhhhhhhhhhcCCCCCCCChhHHHHHHHH
Q 003875 624 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG----EENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFV 699 (790)
Q Consensus 624 tag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g----~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~~i 699 (790)
. .|.+|.+-|.+|..|++.|+|--|...|+..... ..|+|+|..
T Consensus 374 ~--~E~~gl~~lEAma~G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~------------------------------ 421 (473)
T TIGR02095 374 R--FEPCGLTQLYAMRYGTVPIVRRTGGLADTVVDGDPEAESGTGFLFEE------------------------------ 421 (473)
T ss_pred C--cCCcHHHHHHHHHCCCCeEEccCCCccceEecCCCCCCCCceEEeCC------------------------------
Confidence 7 6999999999999999999998888777654431 145555532
Q ss_pred hcCCCCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHh-cCHhHHHHHHHHHhhcCCCCChHHHHHHHH
Q 003875 700 KSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY-CDQKRWTRMSIMNTAGSSKFSSDRTIQEYA 778 (790)
Q Consensus 700 ~~g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y-~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa 778 (790)
.+-++|.+.|. ++...| .|++.|.+|....+. -.||-+++.++|.
T Consensus 422 -------~d~~~la~~i~-------------------------~~l~~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~ 467 (473)
T TIGR02095 422 -------YDPGALLAALS-------------------------RALRLYRQDPSLWEALQKNAMS--QDFSWDKSAKQYV 467 (473)
T ss_pred -------CCHHHHHHHHH-------------------------HHHHHHhcCHHHHHHHHHHHhc--cCCCcHHHHHHHH
Confidence 23344444443 333334 488899988877653 5899999999996
Q ss_pred H
Q 003875 779 R 779 (790)
Q Consensus 779 ~ 779 (790)
+
T Consensus 468 ~ 468 (473)
T TIGR02095 468 E 468 (473)
T ss_pred H
Confidence 5
No 12
>PRK14098 glycogen synthase; Provisional
Probab=99.63 E-value=3.5e-14 Score=159.45 Aligned_cols=268 Identities=17% Similarity=0.276 Sum_probs=183.7
Q ss_pred CeeeeeeeeeccCcchHHHHHHHHHHHhhh-hh----hhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCc
Q 003875 388 QLVRMANLCVVGSHAVNGVAEIHSEIVTNE-VF----NEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTED 462 (790)
Q Consensus 388 ~~v~Ma~Lal~~S~~vNGVS~lHsei~k~~-~f----~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~ 462 (790)
+.+|+...+++.|..|+.||.-..+-+++. .+ ...-...+.++.-|.|||....|- |.-...+.+..+
T Consensus 209 ~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~~l~~~~~kl~~I~NGID~~~~~----p~~d~~~~~~~~--- 281 (489)
T PRK14098 209 DEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDKVLEERKMRLHGILNGIDTRQWN----PSTDKLIKKRYS--- 281 (489)
T ss_pred CcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHHHHHhcCCCeeEEeCCccccccC----CcccccccccCC---
Confidence 357888889999999999998777655431 00 111112367899999999999995 532111111111
Q ss_pred cccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHH
Q 003875 463 WVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKM 542 (790)
Q Consensus 463 W~~~~~~l~~l~~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~i 542 (790)
.+ .+ +-|..+|..| ++..|...+++....+++-|+.++|...+ ++..+.+ +
T Consensus 282 ---------------~~-----~~-~~k~~~k~~l----~~~lgl~~~~~~~~i~~vgRl~~~KG~d~-li~a~~~---l 332 (489)
T PRK14098 282 ---------------IE-----RL-DGKLENKKAL----LEEVGLPFDEETPLVGVIINFDDFQGAEL-LAESLEK---L 332 (489)
T ss_pred ---------------cc-----hh-hhHHHHHHHH----HHHhCCCCccCCCEEEEeccccccCcHHH-HHHHHHH---H
Confidence 11 13 3566677555 45679888999999999999999999988 7776654 3
Q ss_pred HhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhcccccccccc
Q 003875 543 KEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHI 622 (790)
Q Consensus 543 k~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~i 622 (790)
++ .+.++++.|...+. .-+.+.++++.. | + +|.|+..|+-..+..++.+||+...-
T Consensus 333 ~~----------~~~~lvivG~G~~~------~~~~l~~l~~~~---~---~--~V~~~g~~~~~~~~~~~a~aDi~l~P 388 (489)
T PRK14098 333 VE----------LDIQLVICGSGDKE------YEKRFQDFAEEH---P---E--QVSVQTEFTDAFFHLAIAGLDMLLMP 388 (489)
T ss_pred Hh----------cCcEEEEEeCCCHH------HHHHHHHHHHHC---C---C--CEEEEEecCHHHHHHHHHhCCEEEeC
Confidence 32 14588888864221 222333333311 2 2 69999999999999999999999988
Q ss_pred CCCccccCCCccchhhcccceEeeecccccchhccccc--CcceeecccchhhhhhhhhhcCCCCCCCChhHHHHHHHHh
Q 003875 623 STAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG--EENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVK 700 (790)
Q Consensus 623 stag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g--~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~~i~ 700 (790)
|. .|++|.+-|-+|..|++-|+|--|...|+..++. ..|+|+|..
T Consensus 389 S~--~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~------------------------------- 435 (489)
T PRK14098 389 GK--IESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSEDKGSGFIFHD------------------------------- 435 (489)
T ss_pred CC--CCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCCCCceeEeCC-------------------------------
Confidence 76 7999999999999999999998888777654432 235555432
Q ss_pred cCCCCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHH
Q 003875 701 SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARD 780 (790)
Q Consensus 701 ~g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~ 780 (790)
.|-++|.+.|. ++...|.|++.|.+++...++ -.||-++++++|. +
T Consensus 436 ------~d~~~la~ai~-------------------------~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~y~-~ 481 (489)
T PRK14098 436 ------YTPEALVAKLG-------------------------EALALYHDEERWEELVLEAME--RDFSWKNSAEEYA-Q 481 (489)
T ss_pred ------CCHHHHHHHHH-------------------------HHHHHHcCHHHHHHHHHHHhc--CCCChHHHHHHHH-H
Confidence 23344444443 455577889999888776543 5899999999995 4
Q ss_pred hh
Q 003875 781 IW 782 (790)
Q Consensus 781 IW 782 (790)
+|
T Consensus 482 lY 483 (489)
T PRK14098 482 LY 483 (489)
T ss_pred HH
Confidence 44
No 13
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.60 E-value=3.4e-14 Score=157.34 Aligned_cols=264 Identities=19% Similarity=0.274 Sum_probs=176.3
Q ss_pred eeeeeeeeeccCcchHHHHHHHHHHHhhhhhh----hhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccc
Q 003875 389 LVRMANLCVVGSHAVNGVAEIHSEIVTNEVFN----EFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWV 464 (790)
Q Consensus 389 ~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~f~----~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~ 464 (790)
.+++...++..|..|+.||.-+.+-+++..|. .+....+.|+.-|.|||....|- |.-...+.....
T Consensus 187 ~~~~~~~~~~~ad~vitvS~~~~~ei~~~~~~~gl~~~~~~~~~ki~vI~NGid~~~~~----p~~~~~~~~~~~----- 257 (466)
T PRK00654 187 QISFLKAGLYYADRVTTVSPTYAREITTPEFGYGLEGLLRARSGKLSGILNGIDYDIWN----PETDPLLAANYS----- 257 (466)
T ss_pred cccHHHHHHHhcCcCeeeCHHHHHHhccccCCcChHHHHHhcccCceEecCCCCccccC----CccCcccccccC-----
Confidence 46776678899999999999887755543221 12234467899999999999995 432111111111
Q ss_pred cCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHh
Q 003875 465 TNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKE 544 (790)
Q Consensus 465 ~~~~~l~~l~~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~ 544 (790)
. ..| +-|..+|..| +++.|.. +++....+++-|+.++|...+ ++..+.+ +++
T Consensus 258 ---------------~---~~~-~~k~~~k~~l----~~~~gl~-~~~~~~i~~vGRl~~~KG~~~-li~a~~~---l~~ 309 (466)
T PRK00654 258 ---------------A---DDL-EGKAENKRAL----QERFGLP-DDDAPLFAMVSRLTEQKGLDL-VLEALPE---LLE 309 (466)
T ss_pred ---------------h---hhh-hchHHHHHHH----HHHhCCC-CCCCcEEEEeeccccccChHH-HHHHHHH---HHh
Confidence 0 113 2455556544 4566765 457888999999999999998 7766554 332
Q ss_pred cChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCC
Q 003875 545 MSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 624 (790)
Q Consensus 545 ~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~ist 624 (790)
. +.++++.|...+.+ .+.+.+ +++.. ++ +|+|+..|+-+++..++.+||+...-|.
T Consensus 310 -~---------~~~lvivG~g~~~~--~~~l~~----l~~~~------~~--~v~~~~g~~~~~~~~~~~~aDv~v~PS~ 365 (466)
T PRK00654 310 -Q---------GGQLVLLGTGDPEL--EEAFRA----LAARY------PG--KVGVQIGYDEALAHRIYAGADMFLMPSR 365 (466)
T ss_pred -c---------CCEEEEEecCcHHH--HHHHHH----HHHHC------CC--cEEEEEeCCHHHHHHHHhhCCEEEeCCC
Confidence 0 35788888754322 123333 33211 12 5777788988889999999999999888
Q ss_pred CccccCCCccchhhcccceEeeecccccchhcccc----cCcceeecccchhhhhhhhhhcCCCCCCCChhHHHHHHHHh
Q 003875 625 AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV----GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVK 700 (790)
Q Consensus 625 ag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~----g~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~~i~ 700 (790)
.|.+|.+-|-+|..|++.|.|--|.-.|+.... +..|+|+|.
T Consensus 366 --~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~~~~G~lv~-------------------------------- 411 (466)
T PRK00654 366 --FEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDGEATGFVFD-------------------------------- 411 (466)
T ss_pred --CCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCCCCceEEeC--------------------------------
Confidence 799999999999999999999777666654322 114555543
Q ss_pred cCCCCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHH
Q 003875 701 SGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYAR 779 (790)
Q Consensus 701 ~g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~ 779 (790)
+.|-++|.+.|. ++...|.+++.|.+|+...++ -.||.+++.++|.+
T Consensus 412 -----~~d~~~la~~i~-------------------------~~l~~~~~~~~~~~~~~~~~~--~~fsw~~~a~~~~~ 458 (466)
T PRK00654 412 -----DFNAEDLLRALR-------------------------RALELYRQPPLWRALQRQAMA--QDFSWDKSAEEYLE 458 (466)
T ss_pred -----CCCHHHHHHHHH-------------------------HHHHHhcCHHHHHHHHHHHhc--cCCChHHHHHHHHH
Confidence 223444555443 444556788888888766654 58999999999965
No 14
>PRK14099 glycogen synthase; Provisional
Probab=99.34 E-value=3.8e-11 Score=135.05 Aligned_cols=267 Identities=15% Similarity=0.214 Sum_probs=175.3
Q ss_pred eeeeeeeeeccCcchHHHHHHHHHHHhhhhh----hhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccc
Q 003875 389 LVRMANLCVVGSHAVNGVAEIHSEIVTNEVF----NEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWV 464 (790)
Q Consensus 389 ~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~f----~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~ 464 (790)
.++|...++..|..|+.||.-+.+-+++..+ .......+.|+.-|.|||....|- |.-...+....
T Consensus 199 ~~~~~k~~i~~ad~vitVS~~~a~ei~~~~~g~gl~~~l~~~~~ki~vI~NGID~~~f~----p~~~~~~~~~~------ 268 (485)
T PRK14099 199 GIGYLKAGLQLADRITTVSPTYALEIQGPEAGMGLDGLLRQRADRLSGILNGIDTAVWN----PATDELIAATY------ 268 (485)
T ss_pred CccHHHHHHHhcCeeeecChhHHHHHhcccCCcChHHHHHhhCCCeEEEecCCchhhcc----ccccchhhhcC------
Confidence 4566677888999999999887775543210 111223467899999999999994 53222221111
Q ss_pred cCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHh
Q 003875 465 TNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKE 544 (790)
Q Consensus 465 ~~~~~l~~l~~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~ 544 (790)
+.+ .+ +.|..+|..| +++.|...+++.++.++|-|+.+.|...+ ++..+.+ +.+
T Consensus 269 --------------~~~---~~-~~k~~~k~~l----~~~~gl~~~~~~~li~~VgRL~~~KG~d~-Li~A~~~---l~~ 322 (485)
T PRK14099 269 --------------DVE---TL-AARAANKAAL----QARFGLDPDPDALLLGVISRLSWQKGLDL-LLEALPT---LLG 322 (485)
T ss_pred --------------Chh---HH-HhHHHhHHHH----HHHcCCCcccCCcEEEEEecCCccccHHH-HHHHHHH---HHh
Confidence 111 13 4566666554 56789888889999999999999999988 7766544 332
Q ss_pred cChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCC
Q 003875 545 MSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIST 624 (790)
Q Consensus 545 ~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~ist 624 (790)
. ..++|+.|...+ .+-+.+.++++ ..| + +++++-.|+-.+++.+..+||+...-|.
T Consensus 323 -~---------~~~lvivG~G~~------~~~~~l~~l~~---~~~---~--~v~~~~G~~~~l~~~~~a~aDifv~PS~ 378 (485)
T PRK14099 323 -E---------GAQLALLGSGDA------ELEARFRAAAQ---AYP---G--QIGVVIGYDEALAHLIQAGADALLVPSR 378 (485)
T ss_pred -c---------CcEEEEEecCCH------HHHHHHHHHHH---HCC---C--CEEEEeCCCHHHHHHHHhcCCEEEECCc
Confidence 1 346777776322 11222233332 122 2 5655567898999999899999999776
Q ss_pred CccccCCCccchhhcccceEeeecccccchhcccc-------cCcceeecccchhhhhhhhhhcCCCCCCCChhHHHHHH
Q 003875 625 AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV-------GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKK 697 (790)
Q Consensus 625 ag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~-------g~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~ 697 (790)
.|.+|.+-|-+|.-|++-|.|--|.-.|+.... |..|+|+|..
T Consensus 379 --~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~---------------------------- 428 (485)
T PRK14099 379 --FEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQFSP---------------------------- 428 (485)
T ss_pred --cCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEEeCC----------------------------
Confidence 699999999999999766666566666544332 2245555532
Q ss_pred HHhcCCCCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHH
Q 003875 698 FVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEY 777 (790)
Q Consensus 698 ~i~~g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EY 777 (790)
.|-++|.+.|. ++...|.|++.|.++....++ -.||-+++.++|
T Consensus 429 ---------~d~~~La~ai~-------------------------~a~~l~~d~~~~~~l~~~~~~--~~fSw~~~a~~y 472 (485)
T PRK14099 429 ---------VTADALAAALR-------------------------KTAALFADPVAWRRLQRNGMT--TDVSWRNPAQHY 472 (485)
T ss_pred ---------CCHHHHHHHHH-------------------------HHHHHhcCHHHHHHHHHHhhh--hcCChHHHHHHH
Confidence 23444544443 455567889999888777653 679999999999
Q ss_pred HHHhh
Q 003875 778 ARDIW 782 (790)
Q Consensus 778 a~~IW 782 (790)
.+ +|
T Consensus 473 ~~-lY 476 (485)
T PRK14099 473 AA-LY 476 (485)
T ss_pred HH-HH
Confidence 54 44
No 15
>PLN02939 transferase, transferring glycosyl groups
Probab=99.30 E-value=1.1e-10 Score=139.69 Aligned_cols=270 Identities=17% Similarity=0.241 Sum_probs=181.5
Q ss_pred CeeeeeeeeeccCcchHHHHHHHHHHHhhhhh---hhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccc
Q 003875 388 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEVF---NEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWV 464 (790)
Q Consensus 388 ~~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~f---~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~ 464 (790)
+.+|+-..+|+.|..|+-||.-+.+-+.+.-. .......+.++.-|-|||...+|- |.-...|.....
T Consensus 682 ~~iN~LK~GIv~AD~VtTVSptYA~EI~te~G~GL~~~L~~~~~Kl~gIlNGID~e~wn----PatD~~L~~~Ys----- 752 (977)
T PLN02939 682 GRINVVKGAIVYSNIVTTVSPTYAQEVRSEGGRGLQDTLKFHSKKFVGILNGIDTDTWN----PSTDRFLKVQYN----- 752 (977)
T ss_pred CchHHHHHHHHhCCeeEeeeHHHHHHHHHHhccchHHHhccccCCceEEecceehhhcC----CccccccccccC-----
Confidence 46888888899999999999888875543211 112344578899999999999994 643222211111
Q ss_pred cCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCC-CCcceecccccccccccccchhhhHHHHHHHHH
Q 003875 465 TNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVS-PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 543 (790)
Q Consensus 465 ~~~~~l~~l~~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~-pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik 543 (790)
++| | +-|..+|..| ++++|..-+ ++..+.++|-|+++.|...+ ++..+.+. .
T Consensus 753 ------------~~d------l-~GK~~nK~aL----RkelGL~~~d~d~pLIg~VGRL~~QKGiDl-LleA~~~L---l 805 (977)
T PLN02939 753 ------------AND------L-QGKAANKAAL----RKQLGLSSADASQPLVGCITRLVPQKGVHL-IRHAIYKT---A 805 (977)
T ss_pred ------------hhh------h-hhhhhhhHHH----HHHhCCCcccccceEEEEeecCCcccChHH-HHHHHHHH---h
Confidence 111 4 3566666554 567787653 67889999999999999988 77665543 2
Q ss_pred hcChhhhhccccCeEEEEeecC-CCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhcccccccccc
Q 003875 544 EMSAVERKAKFVPRVCIFGGKA-FATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHI 622 (790)
Q Consensus 544 ~~~~~~r~~~~~P~~~IFaGKA-~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~i 622 (790)
+ ...++|+.|.. .|. .-..+ ..++.... ..+ +|.|+-.|+=.++..++.|||+-..-
T Consensus 806 ~----------~dvqLVIvGdGp~~~--~e~eL----~~La~~l~----l~d--rV~FlG~~de~lah~IYAaADIFLmP 863 (977)
T PLN02939 806 E----------LGGQFVLLGSSPVPH--IQREF----EGIADQFQ----SNN--NIRLILKYDEALSHSIYAASDMFIIP 863 (977)
T ss_pred h----------cCCEEEEEeCCCcHH--HHHHH----HHHHHHcC----CCC--eEEEEeccCHHHHHHHHHhCCEEEEC
Confidence 2 03478888865 222 12222 33333221 123 79999999988899999999999998
Q ss_pred CCCccccCCCccchhhcccceEeeecccccchhccccc-------CcceeecccchhhhhhhhhhcCCCCCCCChhHHHH
Q 003875 623 STAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVG-------EENFFLFGARAHEIAGLRKERSEGKFVPDARFEEV 695 (790)
Q Consensus 623 stag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g-------~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v 695 (790)
|+ .|.+|-+-|-+|.-|++-|.+--|.-.|+...+. ..|+|+|..
T Consensus 864 Sr--~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~-------------------------- 915 (977)
T PLN02939 864 SM--FEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLT-------------------------- 915 (977)
T ss_pred CC--ccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEecC--------------------------
Confidence 87 6999999999999999999887777766554431 246666542
Q ss_pred HHHHhcCCCCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHH-HhcCHhHHHHHHHHHhhcCCCCChHHHH
Q 003875 696 KKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDE-AYCDQKRWTRMSIMNTAGSSKFSSDRTI 774 (790)
Q Consensus 696 ~~~i~~g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~-~Y~d~~~W~~~~i~NIA~sg~FSSDRtI 774 (790)
.|-++|.+.|. ++.. +..|+..|.+|....++ -.||-++++
T Consensus 916 -----------~D~eaLa~AL~-------------------------rAL~~~~~dpe~~~~L~~~am~--~dFSWe~~A 957 (977)
T PLN02939 916 -----------PDEQGLNSALE-------------------------RAFNYYKRKPEVWKQLVQKDMN--IDFSWDSSA 957 (977)
T ss_pred -----------CCHHHHHHHHH-------------------------HHHHHhccCHHHHHHHHHHHHH--hcCCHHHHH
Confidence 22334444443 3333 33578889888765443 579999999
Q ss_pred HHHHHHhh
Q 003875 775 QEYARDIW 782 (790)
Q Consensus 775 ~EYa~~IW 782 (790)
++|.+ +|
T Consensus 958 ~qYee-LY 964 (977)
T PLN02939 958 SQYEE-LY 964 (977)
T ss_pred HHHHH-HH
Confidence 99964 44
No 16
>PLN02316 synthase/transferase
Probab=98.73 E-value=5.2e-07 Score=110.03 Aligned_cols=176 Identities=18% Similarity=0.256 Sum_probs=120.3
Q ss_pred CCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcC
Q 003875 427 PEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTG 506 (790)
Q Consensus 427 P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g 506 (790)
+.|+.-|-|||.+.+|- |.-...+ .. .|. ++| +.+-|..+|..| ++++|
T Consensus 786 ~~Kl~vI~NGID~~~w~----P~tD~~l----p~-~y~------------~~~------~~~gK~~~k~~L----r~~lG 834 (1036)
T PLN02316 786 LYKFHGILNGIDPDIWD----PYNDNFI----PV-PYT------------SEN------VVEGKRAAKEAL----QQRLG 834 (1036)
T ss_pred cCCEEEEECCccccccC----Ccccccc----cc-cCC------------chh------hhhhhhhhHHHH----HHHhC
Confidence 46899999999999995 5321111 10 000 011 112344555443 55678
Q ss_pred CcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhh
Q 003875 507 YSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATV 586 (790)
Q Consensus 507 ~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~v 586 (790)
.. +++....++|-|+++.|-..+ ++..+.++ .+ .+.++|+.|-. |....-..+.++...++-
T Consensus 835 L~-~~d~plVg~VGRL~~qKGvdl-Li~Al~~l---l~----------~~~qlVIvG~G-pd~~~e~~l~~La~~Lg~-- 896 (1036)
T PLN02316 835 LK-QADLPLVGIITRLTHQKGIHL-IKHAIWRT---LE----------RNGQVVLLGSA-PDPRIQNDFVNLANQLHS-- 896 (1036)
T ss_pred CC-cccCeEEEEEeccccccCHHH-HHHHHHHH---hh----------cCcEEEEEeCC-CCHHHHHHHHHHHHHhCc--
Confidence 66 357888999999999999988 77665554 21 13577888854 432333445555554431
Q ss_pred cCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccc
Q 003875 587 NHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 659 (790)
Q Consensus 587 n~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~ 659 (790)
. ..+ +|.|.-.|+-.++..+..|||+-.--|+ .|.+|-+-|-+|--|++-|.+--|-..|+...+
T Consensus 897 -~---~~~--rV~f~g~~de~lah~iyaaADiflmPS~--~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~ 961 (1036)
T PLN02316 897 -S---HHD--RARLCLTYDEPLSHLIYAGADFILVPSI--FEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDV 961 (1036)
T ss_pred -c---CCC--eEEEEecCCHHHHHHHHHhCcEEEeCCc--ccCccHHHHHHHHcCCCeEEEcCCCcHhhcccc
Confidence 1 123 7888888999999999999999998876 799999999999999999989888887766543
No 17
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=97.73 E-value=0.00038 Score=79.91 Aligned_cols=271 Identities=18% Similarity=0.238 Sum_probs=182.1
Q ss_pred CeeeeeeeeeccCcchHHHHHHHHHHHhhhhh----hhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCcc
Q 003875 388 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEVF----NEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW 463 (790)
Q Consensus 388 ~~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~f----~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W 463 (790)
+.+++...+|..|.+|+-||.-+.+=+...-| .++-.....+++.|-||+.---| ||+-...+...
T Consensus 197 ~~~~~lK~gi~~ad~vttVSptYa~Ei~t~~~g~gl~g~l~~~~~~l~GI~NgiD~~~w----np~~d~~~~~~------ 266 (487)
T COG0297 197 GQISFLKGGLYYADAVTTVSPTYAGEIYTPEYGEGLEGLLSWRSGKLSGILNGIDYDLW----NPETDPYIAAN------ 266 (487)
T ss_pred CcchhhhhhheeccEEEEECHHHHHhhccccccccchhhhhhccccEEEEEeeEEeccc----Ccccccchhcc------
Confidence 45888889999999999999888763332111 12223335678889999999999 45432222111
Q ss_pred ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHH
Q 003875 464 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 543 (790)
Q Consensus 464 ~~~~~~l~~l~~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik 543 (790)
+ +.+ .|. .|..||..|- ++.|...+.+....+++-|+.++|=-+| ++..+..+ +.
T Consensus 267 ------------y--~~~---~~~-~k~~nk~~L~----~~~gL~~~~~~pl~~~vsRl~~QKG~dl-~~~~i~~~--l~ 321 (487)
T COG0297 267 ------------Y--SAE---VLP-AKAENKVALQ----ERLGLDVDLPGPLFGFVSRLTAQKGLDL-LLEAIDEL--LE 321 (487)
T ss_pred ------------C--Ccc---chh-hhHHHHHHHH----HHhCCCCCCCCcEEEEeeccccccchhH-HHHHHHHH--HH
Confidence 1 111 132 3777877765 4569999999999999999999999888 87777665 22
Q ss_pred hcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 003875 544 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS 623 (790)
Q Consensus 544 ~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~is 623 (790)
. ..|+|+=|.+-|.+..+ +..+++.+. + ++.++--|+..+|++|..|||+|.-=|
T Consensus 322 ~-----------~~~~vilG~gd~~le~~------~~~la~~~~------~--~~~~~i~~~~~la~~i~agaD~~lmPS 376 (487)
T COG0297 322 Q-----------GWQLVLLGTGDPELEEA------LRALASRHP------G--RVLVVIGYDEPLAHLIYAGADVILMPS 376 (487)
T ss_pred h-----------CceEEEEecCcHHHHHH------HHHHHHhcC------c--eEEEEeeecHHHHHHHHhcCCEEEeCC
Confidence 1 25899999996666544 344554332 2 799999999999999999999999766
Q ss_pred CCccccCCCccchhhcccceEeeecccccchhcccccCcceeecccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcC-
Q 003875 624 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSG- 702 (790)
Q Consensus 624 tag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~~i~~g- 702 (790)
+ .|.||-+-|=+|.=|+|=|-. ++|.--.-+... +++. ..-..+|
T Consensus 377 r--fEPcGL~ql~amryGtvpIv~----------~tGGLadTV~~~-------------------~~~~---~~~~gtGf 422 (487)
T COG0297 377 R--FEPCGLTQLYAMRYGTLPIVR----------ETGGLADTVVDR-------------------NEWL---IQGVGTGF 422 (487)
T ss_pred c--CcCCcHHHHHHHHcCCcceEc----------ccCCccceecCc-------------------cchh---ccCceeEE
Confidence 5 699999999999999954433 333222212111 1111 0011223
Q ss_pred CCCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhH-HHHHHHHHhhcCCCCChHHHHHHHHH
Q 003875 703 VFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKR-WTRMSIMNTAGSSKFSSDRTIQEYAR 779 (790)
Q Consensus 703 ~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~-W~~~~i~NIA~sg~FSSDRtI~EYa~ 779 (790)
.|.+.+.+.|...|. +....|.++.. |..+....+. ..||-|+|..+|.+
T Consensus 423 ~f~~~~~~~l~~al~-------------------------rA~~~y~~~~~~w~~~~~~~m~--~d~sw~~sa~~y~~ 473 (487)
T COG0297 423 LFLQTNPDHLANALR-------------------------RALVLYRAPPLLWRKVQPNAMG--ADFSWDLSAKEYVE 473 (487)
T ss_pred EEecCCHHHHHHHHH-------------------------HHHHHhhCCHHHHHHHHHhhcc--cccCchhHHHHHHH
Confidence 122334555555554 66677877777 9887776555 89999999999976
No 18
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.10 E-value=0.0049 Score=62.41 Aligned_cols=131 Identities=14% Similarity=0.110 Sum_probs=90.1
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
.+++....+++-|+.+.|+..+ ++..+.++.+- ..+.++++.|+..+.+....+.+ +...
T Consensus 199 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~~~-----------~~~~~l~i~G~~~~~~~~~~~~~--~~~~------ 258 (375)
T cd03821 199 ILPDKRIILFLGRLHPKKGLDL-LIEAFAKLAER-----------FPDWHLVIAGPDEGGYRAELKQI--AAAL------ 258 (375)
T ss_pred CCCCCcEEEEEeCcchhcCHHH-HHHHHHHhhhh-----------cCCeEEEEECCCCcchHHHHHHH--HHhc------
Confidence 4566778889999999998877 76665443221 12568999998766654433222 1221
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
...+ +|.|+....-+-...++..||+....|.. |..|++-+-+|..|++.|+|-.|...|+... .++++..
T Consensus 259 --~~~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~~--e~~~~~~~Eama~G~PvI~~~~~~~~~~~~~---~~~~~~~ 329 (375)
T cd03821 259 --GLED--RVTFTGMLYGEDKAAALADADLFVLPSHS--ENFGIVVAEALACGTPVVTTDKVPWQELIEY---GCGWVVD 329 (375)
T ss_pred --Cccc--eEEEcCCCChHHHHHHHhhCCEEEecccc--CCCCcHHHHHHhcCCCEEEcCCCCHHHHhhc---CceEEeC
Confidence 1223 68887765544555567889999987776 9999999999999999999988877766543 4444443
No 19
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.05 E-value=0.0088 Score=63.52 Aligned_cols=132 Identities=17% Similarity=0.143 Sum_probs=90.3
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
++++....+++-|+..+|...+ ++..+.++ .. +.++++.|...........+.+++..++.
T Consensus 197 ~~~~~~~i~~~Grl~~~Kg~~~-li~a~~~l---~~-----------~~~l~i~g~g~~~~~~~~~~~~~~~~~~~---- 257 (388)
T TIGR02149 197 IDRSRPYILFVGRITRQKGVPH-LLDAVHYI---PK-----------DVQVVLCAGAPDTPEVAEEVRQAVALLDR---- 257 (388)
T ss_pred CCCCceEEEEEcccccccCHHH-HHHHHHHH---hh-----------cCcEEEEeCCCCcHHHHHHHHHHHHHhcc----
Confidence 4667778889999999999887 66654433 21 23455655443333334455555544431
Q ss_pred CcCCCCcceEEEecC-CChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 589 DPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 589 Dp~i~~~lKVvFlen-Y~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
. .+ +|+|+.. +.-+-...++.+||+-...|. .|..|.+-+-+|.-|++.|+|-.|...|+.+. ..|+++|
T Consensus 258 ~---~~--~v~~~~~~~~~~~~~~~~~~aDv~v~ps~--~e~~g~~~lEA~a~G~PvI~s~~~~~~e~i~~--~~~G~~~ 328 (388)
T TIGR02149 258 N---RT--GIIWINKMLPKEELVELLSNAEVFVCPSI--YEPLGIVNLEAMACGTPVVASATGGIPEVVVD--GETGFLV 328 (388)
T ss_pred c---cC--ceEEecCCCCHHHHHHHHHhCCEEEeCCc--cCCCChHHHHHHHcCCCEEEeCCCCHHHHhhC--CCceEEc
Confidence 1 11 4787755 456667778899999988775 58999999999999999999988888776643 2567766
Q ss_pred c
Q 003875 668 G 668 (790)
Q Consensus 668 G 668 (790)
-
T Consensus 329 ~ 329 (388)
T TIGR02149 329 P 329 (388)
T ss_pred C
Confidence 3
No 20
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=97.01 E-value=0.013 Score=63.19 Aligned_cols=136 Identities=18% Similarity=0.155 Sum_probs=91.8
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCC-CcHHHHHHHHHHHHHhhhhc
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA-TYVQAKRIVKFITDVGATVN 587 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P-~y~~aK~iIk~I~~va~~vn 587 (790)
++++....+++-|+..+|...+ ++..+.+ +++..+. ...++++.|...+ ++..-.++.+++....
T Consensus 215 ~~~~~~~i~~~G~l~~~K~~~~-li~a~~~---l~~~~~~------~~~~l~ivG~~~~~g~~~~~~l~~~~~~~~---- 280 (405)
T TIGR03449 215 LPLDTKVVAFVGRIQPLKAPDV-LLRAVAE---LLDRDPD------RNLRVIVVGGPSGSGLATPDALIELAAELG---- 280 (405)
T ss_pred CCCCCcEEEEecCCCcccCHHH-HHHHHHH---HHhhCCC------cceEEEEEeCCCCCcchHHHHHHHHHHHcC----
Confidence 4567778899999999998776 6555444 4321111 1257788886443 3233344555544332
Q ss_pred CCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 588 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 588 ~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
+.+ +|.|+..-.-+-...++.+||+-...|. .|..|++-+-+|.-|++.|+|-.|...|+.++. .+++++
T Consensus 281 ----l~~--~v~~~g~~~~~~~~~~l~~ad~~v~ps~--~E~~g~~~lEAma~G~Pvi~~~~~~~~e~i~~~--~~g~~~ 350 (405)
T TIGR03449 281 ----IAD--RVRFLPPRPPEELVHVYRAADVVAVPSY--NESFGLVAMEAQACGTPVVAARVGGLPVAVADG--ETGLLV 350 (405)
T ss_pred ----CCc--eEEECCCCCHHHHHHHHHhCCEEEECCC--CCCcChHHHHHHHcCCCEEEecCCCcHhhhccC--CceEEC
Confidence 333 6888875445555678999999988776 589999999999999999999888887766432 566665
Q ss_pred c
Q 003875 668 G 668 (790)
Q Consensus 668 G 668 (790)
.
T Consensus 351 ~ 351 (405)
T TIGR03449 351 D 351 (405)
T ss_pred C
Confidence 3
No 21
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=97.00 E-value=0.029 Score=65.97 Aligned_cols=203 Identities=20% Similarity=0.248 Sum_probs=131.0
Q ss_pred eeeccCcchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhh
Q 003875 395 LCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELR 474 (790)
Q Consensus 395 Lal~~S~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~ 474 (790)
.+...|+.+--||. +.+.+ -..++..-|++ =+-|||.+..|-.
T Consensus 222 ~aa~~Ad~fttVS~----it~~E-~~~Ll~~~pd~--ViPNGid~~~f~~------------------------------ 264 (590)
T cd03793 222 AAAHCAHVFTTVSE----ITAYE-AEHLLKRKPDV--VLPNGLNVKKFSA------------------------------ 264 (590)
T ss_pred HHHhhCCEEEECCh----HHHHH-HHHHhCCCCCE--EeCCCcchhhccc------------------------------
Confidence 44466667777744 44433 34466777777 4459999988752
Q ss_pred hcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cC-CcCCCCcceecc-cccccc-cccccchhhhHHHHHHHHHhcChhhh
Q 003875 475 KFADNEDLQSQFRAAKRNNKMKVVSFIKEK-TG-YSVSPDAMFDIQ-VKRIHE-YKRQLMNILGIVYRYKKMKEMSAVER 550 (790)
Q Consensus 475 ~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~-~g-~~l~pd~lfdvq-~kR~he-YKRq~Lnil~ii~ry~~ik~~~~~~r 550 (790)
.. +|+..|...|+++.++++.. .| ..++|+.....| +=|+.- -|=-.+ ++.-+.|+++....+..+.
T Consensus 265 ----~~----e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDv-lIeAl~rLn~~l~~~~~~~ 335 (590)
T cd03793 265 ----LH----EFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADM-FLEALARLNYLLKVEGSDT 335 (590)
T ss_pred ----ch----hhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHH-HHHHHHHHHHHHHhcCCCC
Confidence 11 15678899999999987543 23 368888777777 799964 577777 8888888887654222111
Q ss_pred hccccCeEEEEeecCC-------CCcHHHHHHHHHHHHHhhhhcCC----------------------------------
Q 003875 551 KAKFVPRVCIFGGKAF-------ATYVQAKRIVKFITDVGATVNHD---------------------------------- 589 (790)
Q Consensus 551 ~~~~~P~~~IFaGKA~-------P~y~~aK~iIk~I~~va~~vn~D---------------------------------- 589 (790)
.+=-.+||-+|.. -+...-|.+-.-++++...|...
T Consensus 336 ---tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~~~~kr~~~~~~~ 412 (590)
T cd03793 336 ---TVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDKVMLKRRIFALQR 412 (590)
T ss_pred ---eEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhHHHHHHHHHhhcc
Confidence 1112345667643 12232333333333322222111
Q ss_pred ----c-------------------------CCCCcceEEEecCC--------ChhhhhhhccccccccccCCCccccCCC
Q 003875 590 ----P-------------------------EIGDLLKVIFVPDY--------NVSVAELLIPASELSQHISTAGMEASGT 632 (790)
Q Consensus 590 ----p-------------------------~i~~~lKVvFlenY--------~vslAe~lipa~Dls~~istag~EASGT 632 (790)
| .-.+++||||.|.| +++. +.++.|||+..--|.. |.-|-
T Consensus 413 ~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y-~E~~~g~dl~v~PS~y--E~fG~ 489 (590)
T cd03793 413 HSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDY-EEFVRGCHLGVFPSYY--EPWGY 489 (590)
T ss_pred CCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcch-HHHhhhceEEEecccc--CCCCc
Confidence 1 12578999999998 5533 4458999999988877 99999
Q ss_pred ccchhhcccceEeeecc
Q 003875 633 SNMKFAMNGCILIGTLD 649 (790)
Q Consensus 633 snMKfamNG~l~lgtlD 649 (790)
.-+-+|.-|++.|+|--
T Consensus 490 ~~lEAma~G~PvI~t~~ 506 (590)
T cd03793 490 TPAECTVMGIPSITTNL 506 (590)
T ss_pred HHHHHHHcCCCEEEccC
Confidence 99999999999999954
No 22
>PLN00142 sucrose synthase
Probab=96.94 E-value=0.011 Score=71.69 Aligned_cols=145 Identities=13% Similarity=0.115 Sum_probs=95.4
Q ss_pred HcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCC---cHHHHHHHHHHH
Q 003875 504 KTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFAT---YVQAKRIVKFIT 580 (790)
Q Consensus 504 ~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~---y~~aK~iIk~I~ 580 (790)
..|..-+++.-+++++=|+..+|.... ++..+.+..++.. . .+-+|.||...|. +......++.+.
T Consensus 564 ~lg~l~~~~kpvIl~VGRL~~~KGid~-LIeA~a~l~~l~~---~-------~~LVIVGgg~d~~~s~d~ee~~el~~L~ 632 (815)
T PLN00142 564 HIGYLKDRKKPIIFSMARLDRVKNLTG-LVEWYGKNKRLRE---L-------VNLVVVGGFIDPSKSKDREEIAEIKKMH 632 (815)
T ss_pred HhCCccCCCCcEEEEEecCcccCCHHH-HHHHHHHHHHhCC---C-------cEEEEEECCccccccccHHHHHHHHHHH
Confidence 456656788878999999999999987 6665444333211 0 2234445542332 233333444444
Q ss_pred HHhhhhcCCcCCCCcceEEEecC---C--ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchh
Q 003875 581 DVGATVNHDPEIGDLLKVIFVPD---Y--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 655 (790)
Q Consensus 581 ~va~~vn~Dp~i~~~lKVvFlen---Y--~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi 655 (790)
++++. -.+.+ +|.|+.. + +-.+.+.+..++|+-.+.|. .|+.|.+-+-+|.-|.+.|+|-.|-..||
T Consensus 633 ~La~~----lgL~~--~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~--~EgFGLvvLEAMA~GlPVVATdvGG~~EI 704 (815)
T PLN00142 633 SLIEK----YNLKG--QFRWIAAQTNRVRNGELYRYIADTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCQGGPAEI 704 (815)
T ss_pred HHHHH----cCCCC--cEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHHH
Confidence 44442 23455 6888753 2 12345555557899987765 79999999999999999999999999888
Q ss_pred cccccCcceeeccc
Q 003875 656 RQEVGEENFFLFGA 669 (790)
Q Consensus 656 ~e~~g~en~~~fG~ 669 (790)
.+.. +|+|++..
T Consensus 705 V~dG--~tG~LV~P 716 (815)
T PLN00142 705 IVDG--VSGFHIDP 716 (815)
T ss_pred hcCC--CcEEEeCC
Confidence 7553 78888753
No 23
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=96.93 E-value=0.015 Score=70.45 Aligned_cols=145 Identities=17% Similarity=0.185 Sum_probs=98.1
Q ss_pred HHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCC---CcHHHHHHHHHH
Q 003875 503 EKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA---TYVQAKRIVKFI 579 (790)
Q Consensus 503 ~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P---~y~~aK~iIk~I 579 (790)
+..|...+|+.-+++++=|+...|.... ++..+.+..++.. ...-+|.||...+ .+...+..++.+
T Consensus 540 ~~~G~l~d~~kpiIl~VGRL~~~KGid~-LIeA~~~l~~l~~----------~~~LVIVGGg~~~~~s~d~ee~~~i~~L 608 (784)
T TIGR02470 540 EHYGYLKDPNKPIIFSMARLDRVKNLTG-LVECYGRSPKLRE----------LVNLVVVAGKLDAKESKDREEQAEIEKM 608 (784)
T ss_pred HHhCCCCCCCCcEEEEEeCCCccCCHHH-HHHHHHHhHhhCC----------CeEEEEEeCCcccccccchhHHHHHHHH
Confidence 4568778999999999999999999776 5554433332221 1344666775432 234444555555
Q ss_pred HHHhhhhcCCcCCCCcceEEEecCC--Chhhhh---hhccccccccccCCCccccCCCccchhhcccceEeeecccccch
Q 003875 580 TDVGATVNHDPEIGDLLKVIFVPDY--NVSVAE---LLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVE 654 (790)
Q Consensus 580 ~~va~~vn~Dp~i~~~lKVvFlenY--~vslAe---~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vE 654 (790)
.++++.. .+.+ +|.|+--. ...+++ .+-.++||-.+.|. .|+.|-.-+-+|.-|.+.|+|-.|-..|
T Consensus 609 ~~la~~~----gL~g--~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~--~EpFGLvvLEAMAcGlPVVAT~~GG~~E 680 (784)
T TIGR02470 609 HNLIDQY----QLHG--QIRWIGAQLNRVRNGELYRYIADTKGIFVQPAL--YEAFGLTVLEAMTCGLPTFATRFGGPLE 680 (784)
T ss_pred HHHHHHh----CCCC--eEEEccCcCCcccHHHHHHHhhccCcEEEECCc--ccCCCHHHHHHHHcCCCEEEcCCCCHHH
Confidence 5555432 3555 78876521 123333 33446789888775 7999999999999999999999999988
Q ss_pred hcccccCcceeecc
Q 003875 655 IRQEVGEENFFLFG 668 (790)
Q Consensus 655 i~e~~g~en~~~fG 668 (790)
|.+. ..|+|++.
T Consensus 681 iV~d--g~tGfLVd 692 (784)
T TIGR02470 681 IIQD--GVSGFHID 692 (784)
T ss_pred HhcC--CCcEEEeC
Confidence 7754 36788874
No 24
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=96.91 E-value=0.0028 Score=59.98 Aligned_cols=133 Identities=20% Similarity=0.210 Sum_probs=94.6
Q ss_pred cCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhc
Q 003875 508 SVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVN 587 (790)
Q Consensus 508 ~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn 587 (790)
..+.+..+.+++-|+..+|+..+ ++..+.++.+=+ .....+++.|. ....+.+..++....
T Consensus 10 ~~~~~~~~il~~g~~~~~K~~~~-li~a~~~l~~~~----------~~~~~l~i~G~----~~~~~~~~~~~~~~~---- 70 (172)
T PF00534_consen 10 KIPDKKKIILFIGRLDPEKGIDL-LIEAFKKLKEKK----------NPNYKLVIVGD----GEYKKELKNLIEKLN---- 70 (172)
T ss_dssp TT-TTSEEEEEESESSGGGTHHH-HHHHHHHHHHHH----------HTTEEEEEESH----CCHHHHHHHHHHHTT----
T ss_pred CCCCCCeEEEEEecCccccCHHH-HHHHHHHHHhhc----------CCCeEEEEEcc----ccccccccccccccc----
Confidence 45678889999999999999998 887776654321 12568899991 112233333333332
Q ss_pred CCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 588 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 588 ~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
+.+ +|.|+....-.-...++..||+..+.|+. |..|++-+-+|..|++.|++--|..-|+..+. .|+++|
T Consensus 71 ----~~~--~i~~~~~~~~~~l~~~~~~~di~v~~s~~--e~~~~~~~Ea~~~g~pvI~~~~~~~~e~~~~~--~~g~~~ 140 (172)
T PF00534_consen 71 ----LKE--NIIFLGYVPDDELDELYKSSDIFVSPSRN--EGFGLSLLEAMACGCPVIASDIGGNNEIINDG--VNGFLF 140 (172)
T ss_dssp ----CGT--TEEEEESHSHHHHHHHHHHTSEEEE-BSS--BSS-HHHHHHHHTT-EEEEESSTHHHHHSGTT--TSEEEE
T ss_pred ----ccc--cccccccccccccccccccceeccccccc--cccccccccccccccceeeccccCCceeeccc--cceEEe
Confidence 122 58888776655666777889999999999 99999999999999999999989998888665 477877
Q ss_pred cc
Q 003875 668 GA 669 (790)
Q Consensus 668 G~ 669 (790)
-.
T Consensus 141 ~~ 142 (172)
T PF00534_consen 141 DP 142 (172)
T ss_dssp ST
T ss_pred CC
Confidence 44
No 25
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=96.90 E-value=0.0026 Score=60.41 Aligned_cols=120 Identities=18% Similarity=0.101 Sum_probs=88.6
Q ss_pred ccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcce
Q 003875 518 QVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLK 597 (790)
Q Consensus 518 q~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lK 597 (790)
++-|+..+|...+ ++..+.+..+- ....+++|.|+..+.+...+.+. ..+ ..+ +
T Consensus 109 ~~g~~~~~k~~~~-~~~a~~~l~~~-----------~~~~~~~i~G~~~~~~~~~~~~~----~~~--------~~~--~ 162 (229)
T cd01635 109 FVGRLAPEKGLDD-LIEAFALLKER-----------GPDLKLVIAGDGPEREYLEELLA----ALL--------LLD--R 162 (229)
T ss_pred EEEeecccCCHHH-HHHHHHHHHHh-----------CCCeEEEEEeCCCChHHHHHHHH----hcC--------Ccc--c
Confidence 7888999988877 65554443221 12568999999988776665521 111 122 7
Q ss_pred EEEecCC-ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 598 VIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 598 VvFlenY-~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
|.|++.+ ..+..+.+..+||+....|+. |+.|++-+-+|..|.+.|+|-+|++-|+.++ .+++|+|
T Consensus 163 v~~~~~~~~~~~~~~~~~~~di~l~~~~~--e~~~~~~~Eam~~g~pvi~s~~~~~~e~i~~--~~~g~~~ 229 (229)
T cd01635 163 VIFLGGLDPEELLALLLAAADVFVLPSLR--EGFGLVVLEAMACGLPVIATDVGGPPEIVED--GLTGLLV 229 (229)
T ss_pred EEEeCCCCcHHHHHHHhhcCCEEEecccc--cCcChHHHHHHhCCCCEEEcCCCCcceEEEC--CCceEEC
Confidence 8999887 567777888889999987775 5999999999999999999999999886443 3666664
No 26
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.77 E-value=0.015 Score=65.51 Aligned_cols=123 Identities=14% Similarity=0.086 Sum_probs=89.0
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 510 ~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
+++....+++-|+...|.... ++..+.+ +++. .....+++.|.........+++-+++.+.+
T Consensus 290 ~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~~~--------~p~~~l~IvG~g~~~~~~~~e~~~li~~l~------ 351 (475)
T cd03813 290 EKEPPVVGLIGRVVPIKDIKT-FIRAAAI---VRKK--------IPDAEGWVIGPTDEDPEYAEECRELVESLG------ 351 (475)
T ss_pred CCCCcEEEEEeccccccCHHH-HHHHHHH---HHHh--------CCCeEEEEECCCCcChHHHHHHHHHHHHhC------
Confidence 356778999999999999877 6655544 3321 124678888866444455566666665553
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccc
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 659 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~ 659 (790)
+.+ +|.|+. ...+.+ +++++|+-...|. .|+.|++-+-+|.-|++.|+|--|..-|+.++.
T Consensus 352 --l~~--~V~f~G--~~~v~~-~l~~aDv~vlpS~--~Eg~p~~vlEAma~G~PVVatd~g~~~elv~~~ 412 (475)
T cd03813 352 --LED--NVKFTG--FQNVKE-YLPKLDVLVLTSI--SEGQPLVILEAMAAGIPVVATDVGSCRELIEGA 412 (475)
T ss_pred --CCC--eEEEcC--CccHHH-HHHhCCEEEeCch--hhcCChHHHHHHHcCCCEEECCCCChHHHhcCC
Confidence 223 788988 445554 5689999998876 599999999999999999999888888877654
No 27
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=96.75 E-value=0.012 Score=58.93 Aligned_cols=129 Identities=18% Similarity=0.019 Sum_probs=90.0
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 510 ~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
+++....+++-|+..+|+..+ ++..+.+ +++. ..+.++++.|...+.+...+. ++....
T Consensus 185 ~~~~~~i~~~G~~~~~k~~~~-li~~~~~---l~~~--------~~~~~l~i~G~~~~~~~~~~~---~~~~~~------ 243 (359)
T cd03808 185 PEDDPVFLFVARLLKDKGIDE-LLEAARI---LKAK--------GPNVRLLLVGDGDEENPAAIL---EIEKLG------ 243 (359)
T ss_pred CCCCcEEEEEeccccccCHHH-HHHHHHH---HHhc--------CCCeEEEEEcCCCcchhhHHH---HHHhcC------
Confidence 456788999999999998877 6655444 3320 125789999988877665544 222211
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
... +|.|+.. .+-...++..||+-...|.. |..|++-+-+|..|.+.|+|-.|..-|+.++ .++++++..
T Consensus 244 --~~~--~v~~~g~--~~~~~~~~~~adi~i~ps~~--e~~~~~~~Ea~~~G~Pvi~s~~~~~~~~i~~--~~~g~~~~~ 313 (359)
T cd03808 244 --LEG--RVEFLGF--RDDVPELLAAADVFVLPSYR--EGLPRVLLEAMAMGRPVIATDVPGCREAVID--GVNGFLVPP 313 (359)
T ss_pred --Ccc--eEEEeec--cccHHHHHHhccEEEecCcc--cCcchHHHHHHHcCCCEEEecCCCchhhhhc--CcceEEECC
Confidence 112 6777765 44556778899998876665 9999999999999999999977777666543 256666643
No 28
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=96.70 E-value=0.012 Score=62.50 Aligned_cols=148 Identities=18% Similarity=0.182 Sum_probs=98.3
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
..++..+.+++-|+.+.|.+.+ ++..+.++.+-. + . .....+++.|...+.....-.....+.+.++..
T Consensus 207 ~~~~~~~i~~~grl~~~Kg~~~-ll~a~~~l~~~~---~-~----~~~~~l~i~G~~~~~~~~~~~~~~~l~~~~~~~-- 275 (392)
T cd03805 207 PKSGKKTFLSINRFERKKNIAL-AIEAFAILKDKL---A-E----FKNVRLVIAGGYDPRVAENVEYLEELQRLAEEL-- 275 (392)
T ss_pred cCCCceEEEEEeeecccCChHH-HHHHHHHHHhhc---c-c----ccCeEEEEEcCCCCCCchhHHHHHHHHHHHHHh--
Confidence 4467788999999999999988 777766643221 0 0 024678888876554333322233333333210
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
..+.+ +|.|+....-.....++.+||+....|. .|..|.+-+-+|..|++.|+|--|...|+... ..+++++.
T Consensus 276 -~~l~~--~V~f~g~~~~~~~~~~l~~ad~~l~~s~--~E~~g~~~lEAma~G~PvI~s~~~~~~e~i~~--~~~g~~~~ 348 (392)
T cd03805 276 -LLLED--QVIFLPSISDSQKELLLSSARALLYTPS--NEHFGIVPLEAMYAGKPVIACNSGGPLETVVD--GETGFLCE 348 (392)
T ss_pred -cCCCc--eEEEeCCCChHHHHHHHhhCeEEEECCC--cCCCCchHHHHHHcCCCEEEECCCCcHHHhcc--CCceEEeC
Confidence 12233 7999988766655678899999887665 58899999999999999999977777776543 25677765
Q ss_pred cchhhh
Q 003875 669 ARAHEI 674 (790)
Q Consensus 669 ~~~~ev 674 (790)
.+.+++
T Consensus 349 ~~~~~~ 354 (392)
T cd03805 349 PTPEEF 354 (392)
T ss_pred CCHHHH
Confidence 444433
No 29
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.64 E-value=0.048 Score=58.53 Aligned_cols=124 Identities=14% Similarity=0.068 Sum_probs=84.3
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
++++..+.+++=|++..|...+ ++..+.++.+. . ...+++++|...+.....+.+.+.+....
T Consensus 186 ~~~~~~~i~~vgrl~~~Kg~~~-ll~a~~~l~~~---~--------~~~~l~i~G~g~~~~~~~~~~~~~~~~~~----- 248 (372)
T cd03792 186 IDPERPYITQVSRFDPWKDPFG-VIDAYRKVKER---V--------PDPQLVLVGSGATDDPEGWIVYEEVLEYA----- 248 (372)
T ss_pred CCCCCcEEEEEeccccccCcHH-HHHHHHHHHhh---C--------CCCEEEEEeCCCCCCchhHHHHHHHHHHh-----
Confidence 5778889999999999999998 76665544222 1 13467788876544333344444433321
Q ss_pred CcCCCCcceEEEecCC--ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchh
Q 003875 589 DPEIGDLLKVIFVPDY--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEI 655 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY--~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi 655 (790)
...+ +|.|+... .-.....++.+||+-...|+ .|..|-+-+-+|..|.+.|+|--|...|+
T Consensus 249 --~~~~--~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~--~Eg~g~~~lEA~a~G~Pvv~s~~~~~~~~ 311 (372)
T cd03792 249 --EGDP--DIHVLTLPPVSDLEVNALQRASTVVLQKSI--REGFGLTVTEALWKGKPVIAGPVGGIPLQ 311 (372)
T ss_pred --CCCC--CeEEEecCCCCHHHHHHHHHhCeEEEeCCC--ccCCCHHHHHHHHcCCCEEEcCCCCchhh
Confidence 1222 57787665 44555678999999976665 68899999999999999999965544443
No 30
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=96.61 E-value=0.026 Score=59.50 Aligned_cols=134 Identities=13% Similarity=0.075 Sum_probs=85.8
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeec-CCCCcHHHHHHHHHHHHHhhhhc
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK-AFATYVQAKRIVKFITDVGATVN 587 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGK-A~P~y~~aK~iIk~I~~va~~vn 587 (790)
..++....+++=|+...|...+ ++..+.++.+. . .+.++++.|. ..+.......-++.+.+- .
T Consensus 216 ~~~~~~~i~~~gr~~~~k~~~~-ll~a~~~l~~~---~--------~~~~l~i~G~~~~~~~~~~~~~~~~~~~~---~- 279 (398)
T cd03800 216 RDPDKPRILAVGRLDPRKGIDT-LIRAYAELPEL---R--------ERANLVIVGGPRDDILAMDEEELRELARE---L- 279 (398)
T ss_pred cCCCCcEEEEEcccccccCHHH-HHHHHHHHHHh---C--------CCeEEEEEECCCCcchhhhhHHHHHHHHh---c-
Confidence 3456677889999998887766 66655444322 1 1345555554 433322222222222221 1
Q ss_pred CCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 588 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 588 ~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
.+.+ +|.|++-..-+-...++..||+-...|. .|..|.+-+-+|..|.+.|++-.|..-|+.++. +++++|
T Consensus 280 ---~~~~--~v~~~g~~~~~~~~~~~~~adi~l~ps~--~e~~~~~l~Ea~a~G~Pvi~s~~~~~~e~i~~~--~~g~~~ 350 (398)
T cd03800 280 ---GVID--RVDFPGRVSREDLPALYRAADVFVNPAL--YEPFGLTALEAMACGLPVVATAVGGPRDIVVDG--VTGLLV 350 (398)
T ss_pred ---CCCc--eEEEeccCCHHHHHHHHHhCCEEEeccc--ccccCcHHHHHHhcCCCEEECCCCCHHHHccCC--CCeEEe
Confidence 1222 6889887766666677888999887665 589999999999999999999888877765443 455555
No 31
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=96.42 E-value=0.041 Score=55.58 Aligned_cols=127 Identities=19% Similarity=0.171 Sum_probs=84.8
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
++++..+.+++-|++.+|+..+ ++..+.+ +++ . ..+.++++.|....... -+..++ ...
T Consensus 189 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~---l~~-~-------~~~~~l~i~G~~~~~~~-~~~~~~--~~~------ 247 (365)
T cd03807 189 LPEDTFLIGIVARLHPQKDHAT-LLRAAAL---LLK-K-------FPNARLLLVGDGPDRAN-LELLAL--KEL------ 247 (365)
T ss_pred CCCCCeEEEEecccchhcCHHH-HHHHHHH---HHH-h-------CCCeEEEEecCCcchhH-HHHHHH--Hhc------
Confidence 4577788899999999998876 6655443 332 1 12568999998654332 222222 011
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
.+.+ .|.|+.. ++-...++..||+-...|.. |..|++-+-+|.-|++.|++--|..-|+.++ ++++|.
T Consensus 248 --~~~~--~v~~~g~--~~~~~~~~~~adi~v~ps~~--e~~~~~~~Ea~a~g~PvI~~~~~~~~e~~~~----~g~~~~ 315 (365)
T cd03807 248 --GLED--KVILLGE--RSDVPALLNALDVFVLSSLS--EGFPNVLLEAMACGLPVVATDVGDNAELVGD----TGFLVP 315 (365)
T ss_pred --CCCc--eEEEccc--cccHHHHHHhCCEEEeCCcc--ccCCcHHHHHHhcCCCEEEcCCCChHHHhhc----CCEEeC
Confidence 1222 5666653 23344678999999887666 9999999999999999999987877766533 455543
No 32
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=96.35 E-value=0.032 Score=60.60 Aligned_cols=137 Identities=15% Similarity=0.187 Sum_probs=88.1
Q ss_pred CCCCcceeccccc-ccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHH----HH-HHHHHHHHH
Q 003875 509 VSPDAMFDIQVKR-IHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQ----AK-RIVKFITDV 582 (790)
Q Consensus 509 l~pd~lfdvq~kR-~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~----aK-~iIk~I~~v 582 (790)
++++....+++=| +..+|...+ ++..+.++ ++.. ....+++.|...|.|.. +. ..-+++..+
T Consensus 207 ~~~~~~~i~~vgR~l~~~Kg~~~-ll~a~~~l---~~~~--------~~~~lvivG~~~~~~g~~~~~~~~~~~~~~~~~ 274 (396)
T cd03818 207 LTPGDEVITFVARNLEPYRGFHV-FMRALPRL---LRAR--------PDARVVIVGGDGVSYGAPPPDGESWKQHMLDEL 274 (396)
T ss_pred CCCCCeEEEEECCCcccccCHHH-HHHHHHHH---HHHC--------CCcEEEEEcCCCcccCCCCCCcccHHHHHHHHh
Confidence 4566677888877 999998877 66655443 3211 13567888875554321 11 112233333
Q ss_pred hhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCc
Q 003875 583 GATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEE 662 (790)
Q Consensus 583 a~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~e 662 (790)
+...+ .+ +|.|+....-.-...++.+||+....|. .|..|.+-+-+|.-|++.|+|-.|..-|+.+. .+
T Consensus 275 ~~~~~-----~~--~V~f~G~v~~~~~~~~l~~adv~v~~s~--~e~~~~~llEAmA~G~PVIas~~~g~~e~i~~--~~ 343 (396)
T cd03818 275 GGRLD-----LS--RVHFLGRVPYDQYLALLQVSDVHVYLTY--PFVLSWSLLEAMACGCLVVGSDTAPVREVITD--GE 343 (396)
T ss_pred hcccC-----cc--eEEEeCCCCHHHHHHHHHhCcEEEEcCc--ccccchHHHHHHHCCCCEEEcCCCCchhhccc--CC
Confidence 32111 12 6999987555555567899999987765 47777788999999999999988877776643 25
Q ss_pred ceeecc
Q 003875 663 NFFLFG 668 (790)
Q Consensus 663 n~~~fG 668 (790)
|++++-
T Consensus 344 ~G~lv~ 349 (396)
T cd03818 344 NGLLVD 349 (396)
T ss_pred ceEEcC
Confidence 666653
No 33
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=96.25 E-value=0.031 Score=60.81 Aligned_cols=134 Identities=15% Similarity=0.133 Sum_probs=92.6
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 510 ~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
+++....+++-|+...|...+ ++..+. .+++.+ ...+++++|.. |.. ..+-+++.+.
T Consensus 190 ~~~~~~i~~~grl~~~Kg~~~-li~a~~---~l~~~~--------~~~~l~i~G~g-~~~---~~l~~~~~~~------- 246 (398)
T cd03796 190 DNDKITIVVISRLVYRKGIDL-LVGIIP---EICKKH--------PNVRFIIGGDG-PKR---ILLEEMREKY------- 246 (398)
T ss_pred CCCceEEEEEeccchhcCHHH-HHHHHH---HHHhhC--------CCEEEEEEeCC-chH---HHHHHHHHHh-------
Confidence 357788999999999999887 665543 343211 25688899964 322 2233333332
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
.+.+ +|.|+...+-+-...++++||+-...|. .|..|.+-+-+|..|++.|+|--|..-|+.++. +.++...
T Consensus 247 -~l~~--~v~~~G~~~~~~~~~~l~~ad~~v~pS~--~E~~g~~~~EAma~G~PVI~s~~gg~~e~i~~~---~~~~~~~ 318 (398)
T cd03796 247 -NLQD--RVELLGAVPHERVRDVLVQGHIFLNTSL--TEAFCIAIVEAASCGLLVVSTRVGGIPEVLPPD---MILLAEP 318 (398)
T ss_pred -CCCC--eEEEeCCCCHHHHHHHHHhCCEEEeCCh--hhccCHHHHHHHHcCCCEEECCCCCchhheeCC---ceeecCC
Confidence 2334 6888876665666778899999998876 599999999999999999999989888877542 2344443
Q ss_pred chhhh
Q 003875 670 RAHEI 674 (790)
Q Consensus 670 ~~~ev 674 (790)
+.+++
T Consensus 319 ~~~~l 323 (398)
T cd03796 319 DVESI 323 (398)
T ss_pred CHHHH
Confidence 44443
No 34
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=96.22 E-value=0.11 Score=51.76 Aligned_cols=131 Identities=16% Similarity=0.147 Sum_probs=86.8
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
..++....+++-|+..+|.-.+ ++.. +..+++. ....++++.|. -.....+.+++...
T Consensus 195 ~~~~~~~i~~~g~~~~~k~~~~-~i~~---~~~~~~~--------~~~~~l~i~G~----~~~~~~~~~~~~~~------ 252 (374)
T cd03801 195 IPEDEPVILFVGRLVPRKGVDL-LLEA---LAKLRKE--------YPDVRLVIVGD----GPLREELEALAAEL------ 252 (374)
T ss_pred CcCCCeEEEEecchhhhcCHHH-HHHH---HHHHhhh--------cCCeEEEEEeC----cHHHHHHHHHHHHh------
Confidence 3456778889999998886555 4443 3334321 12467888881 12222333333222
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
...+ +|.|++...-.-...++..||+-...++. |+.|++-+-++..|++.|+|-.|+.-|+.+. ..+++++.
T Consensus 253 --~~~~--~v~~~g~~~~~~~~~~~~~~di~i~~~~~--~~~~~~~~Ea~~~g~pvI~~~~~~~~~~~~~--~~~g~~~~ 324 (374)
T cd03801 253 --GLGD--RVTFLGFVPDEDLPALYAAADVFVLPSLY--EGFGLVLLEAMAAGLPVVASDVGGIPEVVED--GETGLLVP 324 (374)
T ss_pred --CCCc--ceEEEeccChhhHHHHHHhcCEEEecchh--ccccchHHHHHHcCCcEEEeCCCChhHHhcC--CcceEEeC
Confidence 1223 68888877656666777889999987777 9999999999999999999987888776643 35666654
Q ss_pred c
Q 003875 669 A 669 (790)
Q Consensus 669 ~ 669 (790)
.
T Consensus 325 ~ 325 (374)
T cd03801 325 P 325 (374)
T ss_pred C
Confidence 4
No 35
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=96.20 E-value=0.068 Score=59.61 Aligned_cols=139 Identities=15% Similarity=0.113 Sum_probs=87.4
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCC-CcH--HHHHHHHHHHHHhhh
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA-TYV--QAKRIVKFITDVGAT 585 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P-~y~--~aK~iIk~I~~va~~ 585 (790)
.+++..+.+++=|+++.|.+.+ ++..+.++.+++. .|..+|++|.... ... ..+...+.+..+++.
T Consensus 244 ~~~~~~~i~~vGrl~~~Kg~~~-li~A~~~l~~~~~----------~~~l~li~G~g~~~~~l~~~~~~~~~~~~~~~~~ 312 (439)
T TIGR02472 244 KDPEKPPILAISRPDRRKNIPS-LVEAYGRSPKLQE----------MANLVLVLGCRDDIRKMESQQREVLQKVLLLIDR 312 (439)
T ss_pred cccCCcEEEEEcCCcccCCHHH-HHHHHHhChhhhh----------hccEEEEeCCccccccccHHHHHHHHHHHHHHHH
Confidence 3566778899999999999988 7776655433332 1333445664321 111 222333333333332
Q ss_pred hcCCcCCCCcceEEEecCCChhhhhhhcccc----ccccccCCCccccCCCccchhhcccceEeeecccccchhcccccC
Q 003875 586 VNHDPEIGDLLKVIFVPDYNVSVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGE 661 (790)
Q Consensus 586 vn~Dp~i~~~lKVvFlenY~vslAe~lipa~----Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~ 661 (790)
+ .+.+ +|.|+....-+-...++++| |+-..-|. .|+-|..-+-+|.-|++.|+|--|...|+.+. .
T Consensus 313 ~----~l~~--~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~--~E~fg~~~lEAma~G~PvV~s~~gg~~eiv~~--~ 382 (439)
T TIGR02472 313 Y----DLYG--KVAYPKHHRPDDVPELYRLAARSRGIFVNPAL--TEPFGLTLLEAAACGLPIVATDDGGPRDIIAN--C 382 (439)
T ss_pred c----CCCc--eEEecCCCCHHHHHHHHHHHhhcCCEEecccc--cCCcccHHHHHHHhCCCEEEeCCCCcHHHhcC--C
Confidence 1 2445 78888654433334555555 88776665 59999999999999999999988888877643 2
Q ss_pred cceeecc
Q 003875 662 ENFFLFG 668 (790)
Q Consensus 662 en~~~fG 668 (790)
+|++++-
T Consensus 383 ~~G~lv~ 389 (439)
T TIGR02472 383 RNGLLVD 389 (439)
T ss_pred CcEEEeC
Confidence 5677663
No 36
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=96.18 E-value=0.087 Score=58.49 Aligned_cols=129 Identities=18% Similarity=0.130 Sum_probs=87.8
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 003875 512 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 591 (790)
Q Consensus 512 d~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~ 591 (790)
+.+..+++=|+.++|.... ++..+.+ +++.+ .+.++++.|.- . .-.++.+++.+.+
T Consensus 221 ~~~~il~vGrl~~~Kg~~~-ll~a~~~---l~~~~--------~~~~l~ivG~G---~-~~~~l~~~~~~~~-------- 276 (406)
T PRK15427 221 TPLEIISVARLTEKKGLHV-AIEACRQ---LKEQG--------VAFRYRILGIG---P-WERRLRTLIEQYQ-------- 276 (406)
T ss_pred CCeEEEEEeCcchhcCHHH-HHHHHHH---HHhhC--------CCEEEEEEECc---h-hHHHHHHHHHHcC--------
Confidence 3456788999999999887 6665544 43211 24677777752 1 2234555554442
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCCc----cccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 592 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAG----MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 592 i~~~lKVvFlenY~vslAe~lipa~Dls~~istag----~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
+.+ +|.|+.-..-+-...++.+||+-...|..+ +|+.|..-|-+|.-|.+.|+|-.|...|+.+.. ++++++
T Consensus 277 l~~--~V~~~G~~~~~el~~~l~~aDv~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g~~E~v~~~--~~G~lv 352 (406)
T PRK15427 277 LED--VVEMPGFKPSHEVKAMLDDADVFLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSGIPELVEAD--KSGWLV 352 (406)
T ss_pred CCC--eEEEeCCCCHHHHHHHHHhCCEEEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCCchhhhcCC--CceEEe
Confidence 233 677776544444457889999999887754 688889999999999999999888877766432 566665
Q ss_pred c
Q 003875 668 G 668 (790)
Q Consensus 668 G 668 (790)
-
T Consensus 353 ~ 353 (406)
T PRK15427 353 P 353 (406)
T ss_pred C
Confidence 3
No 37
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.18 E-value=0.063 Score=56.32 Aligned_cols=126 Identities=19% Similarity=0.270 Sum_probs=85.5
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
++++....+++-|+..+|.... ++..+ .++++ . .|.++++.|.. |. .+.+.+++...+
T Consensus 193 ~~~~~~~il~~g~l~~~K~~~~-li~a~---~~l~~-~--------~~~~l~i~G~g-~~---~~~~~~~~~~~~----- 250 (371)
T cd04962 193 APEGEKVLIHISNFRPVKRIDD-VIRIF---AKVRK-E--------VPARLLLVGDG-PE---RSPAERLARELG----- 250 (371)
T ss_pred CCCCCeEEEEecccccccCHHH-HHHHH---HHHHh-c--------CCceEEEEcCC-cC---HHHHHHHHHHcC-----
Confidence 5667778889999999999877 65544 33442 1 25678888864 22 233333333221
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
+.+ +|.|+..- +-...++.+||+....|+ .|+.|.+-+-+|..|.+.|+|--|..-|+.++. .|+|+|
T Consensus 251 ---~~~--~v~~~g~~--~~~~~~~~~~d~~v~ps~--~E~~~~~~~EAma~g~PvI~s~~~~~~e~i~~~--~~G~~~ 318 (371)
T cd04962 251 ---LQD--DVLFLGKQ--DHVEELLSIADLFLLPSE--KESFGLAALEAMACGVPVVASNAGGIPEVVKHG--ETGFLV 318 (371)
T ss_pred ---CCc--eEEEecCc--ccHHHHHHhcCEEEeCCC--cCCCccHHHHHHHcCCCEEEeCCCCchhhhcCC--CceEEc
Confidence 223 68887743 334566889999998875 799999999999999999999777766655432 455555
No 38
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=96.07 E-value=0.052 Score=67.63 Aligned_cols=186 Identities=14% Similarity=0.184 Sum_probs=116.8
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCc------HHHHHHHHHHHHH
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY------VQAKRIVKFITDV 582 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y------~~aK~iIk~I~~v 582 (790)
.+|+..+++++=|+...|.... ++..+.++.++.. . ...++|.|+...... .....+.++|.++
T Consensus 475 ~~pdkpvIL~VGRL~p~KGi~~-LIeAf~~L~~l~~-~--------~nL~LIiG~gdd~d~l~~~~~~~l~~L~~li~~l 544 (1050)
T TIGR02468 475 TNPRKPMILALARPDPKKNITT-LVKAFGECRPLRE-L--------ANLTLIMGNRDDIDEMSSGSSSVLTSVLKLIDKY 544 (1050)
T ss_pred ccCCCcEEEEEcCCccccCHHH-HHHHHHHhHhhcc-C--------CCEEEEEecCchhhhhhccchHHHHHHHHHHHHh
Confidence 4688889999999999999887 7766655544322 1 123445444221110 1123344444433
Q ss_pred hhhhcCCcCCCCcceEEEecCCCh-hhhhhhcccc----ccccccCCCccccCCCccchhhcccceEeeecccccchhcc
Q 003875 583 GATVNHDPEIGDLLKVIFVPDYNV-SVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQ 657 (790)
Q Consensus 583 a~~vn~Dp~i~~~lKVvFlenY~v-slAe~lipa~----Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e 657 (790)
. +.+ +|.|+.--.- .+.+ ++.+| ||..+.|. .|.-|..-+-+|.-|.+.|+|-.|...||.+
T Consensus 545 g--------L~g--~V~FlG~v~~edvp~-lYr~Ad~s~DVFV~PS~--~EgFGLvlLEAMAcGlPVVASdvGG~~EII~ 611 (1050)
T TIGR02468 545 D--------LYG--QVAYPKHHKQSDVPD-IYRLAAKTKGVFINPAF--IEPFGLTLIEAAAHGLPMVATKNGGPVDIHR 611 (1050)
T ss_pred C--------CCC--eEEecCCCCHHHHHH-HHHHhhhcCCeeeCCcc--cCCCCHHHHHHHHhCCCEEEeCCCCcHHHhc
Confidence 2 445 7888653222 3333 44444 68777665 6999999999999999999999999998875
Q ss_pred cccCcceeecccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCCCCCccHHHHHHHhccCCCCCCCcccccccChhHH
Q 003875 658 EVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSY 737 (790)
Q Consensus 658 ~~g~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~~i~~g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY 737 (790)
.. +|+++|-. .|-+.|.+
T Consensus 612 ~g--~nGlLVdP-------------------------------------~D~eaLA~----------------------- 629 (1050)
T TIGR02468 612 VL--DNGLLVDP-------------------------------------HDQQAIAD----------------------- 629 (1050)
T ss_pred cC--CcEEEECC-------------------------------------CCHHHHHH-----------------------
Confidence 43 67777642 12222322
Q ss_pred HHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhcc
Q 003875 738 LECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNI 784 (790)
Q Consensus 738 ~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i 784 (790)
.+...+.|+..|.+|........-.||-++++++|.+.+=.+
T Consensus 630 -----AL~~LL~Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 630 -----ALLKLVADKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred -----HHHHHhhCHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 222334567777776665554444699999999998776544
No 39
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=96.04 E-value=0.076 Score=54.44 Aligned_cols=134 Identities=13% Similarity=0.061 Sum_probs=84.1
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHH-HHHHHHHhhhhcC
Q 003875 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRI-VKFITDVGATVNH 588 (790)
Q Consensus 510 ~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~i-Ik~I~~va~~vn~ 588 (790)
.++....+++-|++++|...+ ++..+.+ +++ . ..+.++++.|..++....-+.. .++|.+.+
T Consensus 182 ~~~~~~i~~~G~~~~~K~~~~-ll~a~~~---~~~-~-------~~~~~l~i~G~~~~~~~~~~~~~~~~i~~~~----- 244 (366)
T cd03822 182 LDGRPVLLTFGLLRPYKGLEL-LLEALPL---LVA-K-------HPDVRLLVAGETHPDLERYRGEAYALAERLG----- 244 (366)
T ss_pred CCCCeEEEEEeeccCCCCHHH-HHHHHHH---HHh-h-------CCCeEEEEeccCccchhhhhhhhHhHHHhcC-----
Confidence 345677888899999998766 6655544 332 1 1256888999877655433221 12233322
Q ss_pred CcCCCCcceEEEecC-CChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 589 DPEIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 589 Dp~i~~~lKVvFlen-Y~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
+.+ +|.|++. ..-+-...++..||+-...|+...+.-|..-+-+|.-|.+.|+|-.|. .|... ...++++|
T Consensus 245 ---~~~--~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-~~~i~--~~~~g~~~ 316 (366)
T cd03822 245 ---LAD--RVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-AEEVL--DGGTGLLV 316 (366)
T ss_pred ---CCC--cEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-hheee--eCCCcEEE
Confidence 233 6999988 445556678889999887655433355555667789999999997777 44332 23455555
Q ss_pred c
Q 003875 668 G 668 (790)
Q Consensus 668 G 668 (790)
.
T Consensus 317 ~ 317 (366)
T cd03822 317 P 317 (366)
T ss_pred c
Confidence 3
No 40
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=95.90 E-value=0.096 Score=53.68 Aligned_cols=120 Identities=15% Similarity=0.051 Sum_probs=84.0
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 510 ~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
.++....+++-|+..+|+..+ ++..+.. +++.+ .+..+++.|...+.+......+ ...
T Consensus 192 ~~~~~~i~~~G~~~~~K~~~~-~l~~~~~---~~~~~--------~~~~l~i~G~~~~~~~~~~~~~---~~~------- 249 (365)
T cd03809 192 LLPRPYFLYVGTIEPRKNLER-LLEAFAR---LPAKG--------PDPKLVIVGKRGWLNEELLARL---REL------- 249 (365)
T ss_pred CCCCCeEEEeCCCccccCHHH-HHHHHHH---HHHhc--------CCCCEEEecCCccccHHHHHHH---HHc-------
Confidence 445678889999999998776 6555443 43211 1467888887776666554443 111
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhc
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 656 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~ 656 (790)
...+ +|.|+...+-.-...++.+||+-...|+ .|..|.+-+-+|.-|++.|+|--|+..|+.
T Consensus 250 -~~~~--~v~~~g~~~~~~~~~~~~~~d~~l~ps~--~e~~~~~~~Ea~a~G~pvI~~~~~~~~e~~ 311 (365)
T cd03809 250 -GLGD--RVRFLGYVSDEELAALYRGARAFVFPSL--YEGFGLPVLEAMACGTPVIASNISSLPEVA 311 (365)
T ss_pred -CCCC--eEEECCCCChhHHHHHHhhhhhhcccch--hccCCCCHHHHhcCCCcEEecCCCCcccee
Confidence 1222 6888877666666778899999887665 488888899999999999999777666544
No 41
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=95.86 E-value=0.15 Score=55.88 Aligned_cols=136 Identities=16% Similarity=0.146 Sum_probs=88.7
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCC-CcHHHHHHHHHHHHHhhhhc
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA-TYVQAKRIVKFITDVGATVN 587 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P-~y~~aK~iIk~I~~va~~vn 587 (790)
++++....+++-|+..+|.... ++..+.+ +++.. ....+++.|.... .........+.+..+++..
T Consensus 189 ~~~~~~~il~~Grl~~~Kg~~~-Li~A~~~---l~~~~--------p~~~lvivG~g~~~~~~~~~~~~~~l~~~~~~l- 255 (380)
T PRK15484 189 ISPDETVLLYAGRISPDKGILL-LMQAFEK---LATAH--------SNLKLVVVGDPTASSKGEKAAYQKKVLEAAKRI- 255 (380)
T ss_pred CCCCCeEEEEeccCccccCHHH-HHHHHHH---HHHhC--------CCeEEEEEeCCccccccchhHHHHHHHHHHHhc-
Confidence 4556677889999999999887 6665544 33201 1356777765332 2111223344444444322
Q ss_pred CCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 588 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 588 ~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
++ +|.|+..-.-+-...++++||+-...|+. .|.-|..-+-+|.-|++.|+|--|...|+.+.. .|+|++
T Consensus 256 -----~~--~v~~~G~~~~~~l~~~~~~aDv~v~pS~~-~E~f~~~~lEAma~G~PVI~s~~gg~~Eiv~~~--~~G~~l 325 (380)
T PRK15484 256 -----GD--RCIMLGGQPPEKMHNYYPLADLVVVPSQV-EEAFCMVAVEAMAAGKPVLASTKGGITEFVLEG--ITGYHL 325 (380)
T ss_pred -----CC--cEEEeCCCCHHHHHHHHHhCCEEEeCCCC-ccccccHHHHHHHcCCCEEEeCCCCcHhhcccC--CceEEE
Confidence 12 68888765545556778999999875542 388888888999999999999889888876543 566643
No 42
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=95.77 E-value=0.13 Score=54.72 Aligned_cols=130 Identities=15% Similarity=0.077 Sum_probs=84.3
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 510 ~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
.++.+..+++-|+.+.|.+.+ ++..+..+.+- .+.. ....++++.|.. |. -+.+.+++.+..
T Consensus 191 ~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~---~~~~----~~~~~l~i~G~g-~~---~~~~~~~~~~~~------ 252 (374)
T TIGR03088 191 ADESVVVGTVGRLQAVKDQPT-LVRAFALLVRQ---LPEG----AERLRLVIVGDG-PA---RGACEQMVRAAG------ 252 (374)
T ss_pred CCCCeEEEEEecCCcccCHHH-HHHHHHHHHHh---Cccc----ccceEEEEecCC-ch---HHHHHHHHHHcC------
Confidence 456788999999999999887 66655544221 1110 114688888852 21 234444554332
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
+.+ .|.|+ .+ ..-...++.+||+-...|. .|+.|.+-+-+|..|.+.|+|--|...|+.++. .++++|
T Consensus 253 --~~~--~v~~~-g~-~~~~~~~~~~adi~v~pS~--~Eg~~~~~lEAma~G~Pvv~s~~~g~~e~i~~~--~~g~~~ 320 (374)
T TIGR03088 253 --LAH--LVWLP-GE-RDDVPALMQALDLFVLPSL--AEGISNTILEAMASGLPVIATAVGGNPELVQHG--VTGALV 320 (374)
T ss_pred --Ccc--eEEEc-CC-cCCHHHHHHhcCEEEeccc--cccCchHHHHHHHcCCCEEEcCCCCcHHHhcCC--CceEEe
Confidence 222 34444 33 2334566799999887665 699999999999999999999877777766432 455554
No 43
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=95.73 E-value=0.028 Score=58.00 Aligned_cols=129 Identities=16% Similarity=0.104 Sum_probs=92.0
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 510 ~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
+.+....+++-|+.++|+... ++..+.++. ...+++.|..- ....+.+++...+
T Consensus 188 ~~~~~~i~~~G~~~~~K~~~~-li~a~~~l~---------------~~~l~i~G~g~----~~~~~~~~~~~~~------ 241 (357)
T cd03795 188 AAGRPFFLFVGRLVYYKGLDV-LLEAAAALP---------------DAPLVIVGEGP----LEAELEALAAALG------ 241 (357)
T ss_pred CCCCcEEEEecccccccCHHH-HHHHHHhcc---------------CcEEEEEeCCh----hHHHHHHHHHhcC------
Confidence 345678899999999998877 665544321 34788888642 2233334442222
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
... +|.|++...=+-...++..||+-...|+...|..|.+-+-+|..|.+.|+|-.|..-|..+. ..+|++++..
T Consensus 242 --~~~--~V~~~g~v~~~~~~~~~~~ad~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~-~~~~g~~~~~ 316 (357)
T cd03795 242 --LLD--RVRFLGRLDDEEKAALLAACDVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL-HGVTGLVVPP 316 (357)
T ss_pred --Ccc--eEEEcCCCCHHHHHHHHHhCCEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh-CCCceEEeCC
Confidence 222 69999987755566788999999988877789999999999999999999987877775554 3478877753
No 44
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=95.59 E-value=0.051 Score=57.69 Aligned_cols=166 Identities=18% Similarity=0.139 Sum_probs=103.5
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 003875 514 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 593 (790)
Q Consensus 514 lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~ 593 (790)
...+++-|+...|.... ++..+.++.+- .| ...+++.|...... .+-+++.. ..+.
T Consensus 205 ~~i~~vgrl~~~K~~~~-li~a~~~l~~~---~~--------~~~l~i~G~g~~~~----~~~~~~~~--------~~~~ 260 (372)
T cd04949 205 HKIITVARLAPEKQLDQ-LIKAFAKVVKQ---VP--------DATLDIYGYGDEEE----KLKELIEE--------LGLE 260 (372)
T ss_pred CeEEEEEccCcccCHHH-HHHHHHHHHHh---CC--------CcEEEEEEeCchHH----HHHHHHHH--------cCCc
Confidence 35678889999998877 66665554321 11 35677777654332 22222211 1223
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc-ccchhcccccCcceeecccchh
Q 003875 594 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG-ANVEIRQEVGEENFFLFGARAH 672 (790)
Q Consensus 594 ~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDG-a~vEi~e~~g~en~~~fG~~~~ 672 (790)
+ .|.|.. |. +-...++..||+....|. .|+-|.+-+-+|..|++.|++--| ..-|+.+. .+|++++..
T Consensus 261 ~--~v~~~g-~~-~~~~~~~~~ad~~v~~S~--~Eg~~~~~lEAma~G~PvI~~~~~~g~~~~v~~--~~~G~lv~~--- 329 (372)
T cd04949 261 D--YVFLKG-YT-RDLDEVYQKAQLSLLTSQ--SEGFGLSLMEALSHGLPVISYDVNYGPSEIIED--GENGYLVPK--- 329 (372)
T ss_pred c--eEEEcC-CC-CCHHHHHhhhhEEEeccc--ccccChHHHHHHhCCCCEEEecCCCCcHHHccc--CCCceEeCC---
Confidence 3 455554 54 334567788999999987 599999999999999999998544 34444322 245555432
Q ss_pred hhhhhhhhcCCCCCCCChhHHHHHHHHhcCCCCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHh
Q 003875 673 EIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQK 752 (790)
Q Consensus 673 ev~~l~~~~~~~~~~~~~~~~~v~~~i~~g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~ 752 (790)
.+.++|.+ .+..+..|++
T Consensus 330 ----------------------------------~d~~~la~----------------------------~i~~ll~~~~ 347 (372)
T cd04949 330 ----------------------------------GDIEALAE----------------------------AIIELLNDPK 347 (372)
T ss_pred ----------------------------------CcHHHHHH----------------------------HHHHHHcCHH
Confidence 12333322 2333445777
Q ss_pred HHHHHHHHHhhcCCCCChHHHHHH
Q 003875 753 RWTRMSIMNTAGSSKFSSDRTIQE 776 (790)
Q Consensus 753 ~W~~~~i~NIA~sg~FSSDRtI~E 776 (790)
.|.++...+.+.+..||++++++.
T Consensus 348 ~~~~~~~~a~~~~~~~s~~~~~~~ 371 (372)
T cd04949 348 LLQKFSEAAYENAERYSEENVWEK 371 (372)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHhc
Confidence 788888877777788888887765
No 45
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.44 E-value=0.22 Score=52.27 Aligned_cols=128 Identities=17% Similarity=0.169 Sum_probs=84.9
Q ss_pred cceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCC
Q 003875 513 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 592 (790)
Q Consensus 513 ~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i 592 (790)
....+++=|+..+|.... ++..+.. |++. .....++++|.- | .-.++-+++.+.+ +
T Consensus 188 ~~~i~~~G~~~~~K~~~~-li~a~~~---l~~~--------~~~~~l~ivG~g-~---~~~~~~~~~~~~~--------~ 243 (367)
T cd05844 188 PPRILFVGRFVEKKGPLL-LLEAFAR---LARR--------VPEVRLVIIGDG-P---LLAALEALARALG--------L 243 (367)
T ss_pred CcEEEEEEeeccccChHH-HHHHHHH---HHHh--------CCCeEEEEEeCc-h---HHHHHHHHHHHcC--------C
Confidence 346778889999998776 6555443 3321 124678888852 1 1123334443321 2
Q ss_pred CCcceEEEecCCChhhhhhhccccccccccCCC---c-cccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 593 GDLLKVIFVPDYNVSVAELLIPASELSQHISTA---G-MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 593 ~~~lKVvFlenY~vslAe~lipa~Dls~~ista---g-~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
.+ +|.|+....-.-...++.+||+-...|.. | .|+.|++-+-+|.=|++.|+|-.|.+.|+.++. .++++|.
T Consensus 244 ~~--~v~~~g~~~~~~l~~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~~~e~i~~~--~~g~~~~ 319 (367)
T cd05844 244 GG--RVTFLGAQPHAEVRELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGGIPEAVEDG--ETGLLVP 319 (367)
T ss_pred CC--eEEECCCCCHHHHHHHHHhCCEEEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCCchhheecC--CeeEEEC
Confidence 23 68898887656566778999997765543 2 689999999999999999999888877765432 5666664
No 46
>PLN02949 transferase, transferring glycosyl groups
Probab=95.34 E-value=0.25 Score=56.57 Aligned_cols=136 Identities=16% Similarity=0.151 Sum_probs=86.5
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeec-CCCCcHH-HHHHHHHHHHHhhhhcCC
Q 003875 512 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK-AFATYVQ-AKRIVKFITDVGATVNHD 589 (790)
Q Consensus 512 d~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGK-A~P~y~~-aK~iIk~I~~va~~vn~D 589 (790)
+..+.+++=||...|+..+ ++..+.++.+-. +.. .....++++|. ..+.+.. -+++-+++.+.+
T Consensus 267 ~~~~il~vGR~~~~Kg~~l-lI~A~~~l~~~~---~~~----~~~~~LvIvG~~~~~~~~~~~~eL~~la~~l~------ 332 (463)
T PLN02949 267 DPPYIISVAQFRPEKAHAL-QLEAFALALEKL---DAD----VPRPKLQFVGSCRNKEDEERLQKLKDRAKELG------ 332 (463)
T ss_pred CCCEEEEEEeeeccCCHHH-HHHHHHHHHHhc---ccc----CCCcEEEEEeCCCCcccHHHHHHHHHHHHHcC------
Confidence 3345667779999999999 888777664321 100 11234555554 3444432 234444444332
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccc-cchhcc-cccCcceeec
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGA-NVEIRQ-EVGEENFFLF 667 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa-~vEi~e-~~g~en~~~f 667 (790)
+.+ +|.|+.+-.-+--..++..||+-.+.|. .|.=|.+-+-+|.-|++.|++--|- ..||.. +.+.+++|++
T Consensus 333 --L~~--~V~f~g~v~~~el~~ll~~a~~~v~~s~--~E~FGivvlEAMA~G~PVIa~~~gGp~~eIV~~~~~g~tG~l~ 406 (463)
T PLN02949 333 --LDG--DVEFHKNVSYRDLVRLLGGAVAGLHSMI--DEHFGISVVEYMAAGAVPIAHNSAGPKMDIVLDEDGQQTGFLA 406 (463)
T ss_pred --CCC--cEEEeCCCCHHHHHHHHHhCcEEEeCCc--cCCCChHHHHHHHcCCcEEEeCCCCCcceeeecCCCCcccccC
Confidence 344 6999988655555667889999997664 6999999999999999999986543 445543 3334556555
No 47
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=95.32 E-value=0.076 Score=55.08 Aligned_cols=133 Identities=19% Similarity=0.187 Sum_probs=94.5
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
.+++....+++-|+...|.+.. ++..+.. +++ . ..+.++++.|...+.....+.+.+++.+.+
T Consensus 181 ~~~~~~~i~~~Gr~~~~Kg~~~-li~~~~~---l~~-~-------~~~~~l~ivG~~~~~~~~~~~~~~~~~~~~----- 243 (355)
T cd03819 181 LPKGKPVILLPGRLTRWKGQEV-FIEALAR---LKK-D-------DPDVHLLIVGDAQGRRFYYAELLELIKRLG----- 243 (355)
T ss_pred CCCCceEEEEeeccccccCHHH-HHHHHHH---HHh-c-------CCCeEEEEEECCcccchHHHHHHHHHHHcC-----
Confidence 4567788899999999999887 6655444 432 1 126789999987766555566666555443
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
+.+ +|.|+.. .+--..++.+||+-...|. ..|..|++-+=+|.-|.+.|+|-.|..-|+.++. .+++++.
T Consensus 244 ---~~~--~v~~~g~--~~~~~~~l~~ad~~i~ps~-~~e~~~~~l~EA~a~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 313 (355)
T cd03819 244 ---LQD--RVTFVGH--CSDMPAAYALADIVVSAST-EPEAFGRTAVEAQAMGRPVIASDHGGARETVRPG--ETGLLVP 313 (355)
T ss_pred ---Ccc--eEEEcCC--cccHHHHHHhCCEEEecCC-CCCCCchHHHHHHhcCCCEEEcCCCCcHHHHhCC--CceEEeC
Confidence 122 5777766 3333456788999887663 3689999999999999999999888888776553 3677764
No 48
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.31 E-value=0.22 Score=58.82 Aligned_cols=128 Identities=17% Similarity=0.143 Sum_probs=89.1
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 510 ~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
.++..+.+++=||+..|.+.. ++..+.++. ++ . ....+++.|.. | .-.++-+++.+.+
T Consensus 395 ~~~~~vIg~VgRl~~~Kg~~~-LI~A~a~ll--k~-~--------pdirLvIVGdG-~---~~eeLk~la~elg------ 452 (578)
T PRK15490 395 QDADTTIGGVFRFVGDKNPFA-WIDFAARYL--QH-H--------PATRFVLVGDG-D---LRAEAQKRAEQLG------ 452 (578)
T ss_pred CCCCcEEEEEEEEehhcCHHH-HHHHHHHHH--hH-C--------CCeEEEEEeCc-h---hHHHHHHHHHHcC------
Confidence 455667889999999999987 555443331 21 1 24578888853 1 1223444444332
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
+.+ +|.|+.. .-.+ ..++.++|+....|. .|+.|.+-+-+|.-|.+.|+|--|...|+.++. +|+|++..
T Consensus 453 --L~d--~V~FlG~-~~Dv-~~~LaaADVfVlPS~--~EGfp~vlLEAMA~GlPVVATdvGG~~EiV~dG--~nG~LVp~ 522 (578)
T PRK15490 453 --ILE--RILFVGA-SRDV-GYWLQKMNVFILFSR--YEGLPNVLIEAQMVGVPVISTPAGGSAECFIEG--VSGFILDD 522 (578)
T ss_pred --CCC--cEEECCC-hhhH-HHHHHhCCEEEEccc--ccCccHHHHHHHHhCCCEEEeCCCCcHHHcccC--CcEEEECC
Confidence 233 6888864 3334 457899999998875 699999999999999999999999998877643 78888754
No 49
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=95.21 E-value=0.17 Score=51.39 Aligned_cols=129 Identities=12% Similarity=0.136 Sum_probs=83.7
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 510 ~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
+.+.+..+++-|+..+|...+ ++..+. ++.+ . .+.++++.|...... .+.+++...
T Consensus 217 ~~~~~~i~~~G~~~~~k~~~~-l~~~~~---~l~~-~--------~~~~l~i~G~~~~~~----~~~~~~~~~------- 272 (394)
T cd03794 217 LDDKFVVLYAGNIGRAQGLDT-LLEAAA---LLKD-R--------PDIRFLIVGDGPEKE----ELKELAKAL------- 272 (394)
T ss_pred CCCcEEEEEecCcccccCHHH-HHHHHH---HHhh-c--------CCeEEEEeCCcccHH----HHHHHHHHc-------
Confidence 456788999999999998777 665544 3432 1 156788888644322 222222111
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCcc---ccCCCccchhhcccceEeeecccccchhcccccCcceee
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGM---EASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFL 666 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~---EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~ 666 (790)
... .|.|++..+-+-...++..||+-...+.... .++++.-+-+|.-|++.|+|-.|..-|+..+. .++++
T Consensus 273 -~~~---~v~~~g~~~~~~~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~~~~~--~~g~~ 346 (394)
T cd03794 273 -GLD---NVTFLGRVPKEELPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAELVEEA--GAGLV 346 (394)
T ss_pred -CCC---cEEEeCCCChHHHHHHHHhhCeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhhhccC--CcceE
Confidence 111 5899986555566678899999988776553 33344457899999999999888887765432 45555
Q ss_pred cc
Q 003875 667 FG 668 (790)
Q Consensus 667 fG 668 (790)
|.
T Consensus 347 ~~ 348 (394)
T cd03794 347 VP 348 (394)
T ss_pred eC
Confidence 43
No 50
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=94.93 E-value=0.073 Score=53.17 Aligned_cols=130 Identities=17% Similarity=0.102 Sum_probs=88.0
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
.+.+....+++-|+.+.|+..+ ++..+. ++++ . ..+.++++.|.....+. +.+++....
T Consensus 185 ~~~~~~~i~~~g~~~~~k~~~~-~i~~~~---~l~~-~-------~~~~~l~i~G~~~~~~~----~~~~~~~~~----- 243 (353)
T cd03811 185 IPPDGPVILAVGRLSPQKGFDT-LIRAFA---LLRK-E-------GPDARLVILGDGPLREE----LEALAKELG----- 243 (353)
T ss_pred CCCCceEEEEEecchhhcChHH-HHHHHH---Hhhh-c-------CCCceEEEEcCCccHHH----HHHHHHhcC-----
Confidence 4566788899999999998776 554443 3432 1 12567888886543322 223333322
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
..+ +|.|+.. ++-...++..||+....|.. |..|++-+-+|.-|++.|+|-.|..-|+.+.. .+++++.
T Consensus 244 ---~~~--~v~~~g~--~~~~~~~~~~~d~~i~ps~~--e~~~~~~~Ea~~~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 312 (353)
T cd03811 244 ---LAD--RVHFLGF--QSNPYPYLKAADLFVLSSRY--EGFPNVLLEAMALGTPVVATDCPGPREILEDG--ENGLLVP 312 (353)
T ss_pred ---CCc--cEEEecc--cCCHHHHHHhCCEEEeCccc--CCCCcHHHHHHHhCCCEEEcCCCChHHHhcCC--CceEEEC
Confidence 122 4666665 33345688999999887654 99999999999999999999888877766543 6788776
Q ss_pred cc
Q 003875 669 AR 670 (790)
Q Consensus 669 ~~ 670 (790)
..
T Consensus 313 ~~ 314 (353)
T cd03811 313 VG 314 (353)
T ss_pred CC
Confidence 43
No 51
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=94.79 E-value=0.075 Score=54.86 Aligned_cols=131 Identities=18% Similarity=0.100 Sum_probs=90.1
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003875 511 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 511 pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp 590 (790)
.+....+++-|+..+|...+ ++..+.++ +. . ..+.++++.|...+.. .+-+++....
T Consensus 177 ~~~~~i~~~g~~~~~k~~~~-l~~~~~~l---~~-~-------~~~~~l~i~G~~~~~~----~~~~~~~~~~------- 233 (355)
T cd03799 177 GEPLRILSVGRLVEKKGLDY-LLEALALL---KD-R-------GIDFRLDIVGDGPLRD----ELEALIAELG------- 233 (355)
T ss_pred CCCeEEEEEeeeccccCHHH-HHHHHHHH---hh-c-------CCCeEEEEEECCccHH----HHHHHHHHcC-------
Confidence 45567788899999998777 77766543 32 1 1256788888654432 2333333321
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCC----ccccCCCccchhhcccceEeeecccccchhcccccCcceee
Q 003875 591 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTA----GMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFL 666 (790)
Q Consensus 591 ~i~~~lKVvFlenY~vslAe~lipa~Dls~~ista----g~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~ 666 (790)
..+ .|.|.....-.-...++..||+-...|.. ..|+.|++-+-+|.-|++.|+|-.|+.-|+.+.. .++++
T Consensus 234 -~~~--~v~~~g~~~~~~l~~~~~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~i~~~--~~g~~ 308 (355)
T cd03799 234 -LED--RVTLLGAKSQEEVRELLRAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSGIPELVEDG--ETGLL 308 (355)
T ss_pred -CCC--eEEECCcCChHHHHHHHHhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCCcchhhhCC--CceEE
Confidence 122 58888777666667788899999887665 2488899999999999999999888877766542 47777
Q ss_pred ccc
Q 003875 667 FGA 669 (790)
Q Consensus 667 fG~ 669 (790)
+..
T Consensus 309 ~~~ 311 (355)
T cd03799 309 VPP 311 (355)
T ss_pred eCC
Confidence 753
No 52
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=94.76 E-value=0.15 Score=51.93 Aligned_cols=132 Identities=17% Similarity=0.166 Sum_probs=91.8
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
++++....+++-|+..+|+... ++..+. ++++ . ....++++.|... ..+.+.+++....
T Consensus 198 ~~~~~~~i~~~G~~~~~k~~~~-l~~~~~---~~~~-~-------~~~~~l~i~G~~~----~~~~~~~~~~~~~----- 256 (374)
T cd03817 198 IPEDEPVLLYVGRLAKEKNIDF-LIRAFA---RLLK-E-------EPDVKLVIVGDGP----EREELEELARELG----- 256 (374)
T ss_pred CCCCCeEEEEEeeeecccCHHH-HHHHHH---HHHH-h-------CCCeEEEEEeCCc----hHHHHHHHHHHcC-----
Confidence 4566778899999999998766 555544 3432 1 1246788888642 2233444443222
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
..+ +|.|++...-+-...++..||+-...|. .|..|++-+-+|.-|++.|+|-.|+.-|+.+.. ++++++.
T Consensus 257 ---~~~--~v~~~g~~~~~~~~~~~~~ad~~l~~s~--~e~~~~~~~Ea~~~g~PvI~~~~~~~~~~i~~~--~~g~~~~ 327 (374)
T cd03817 257 ---LAD--RVIFTGFVPREELPDYYKAADLFVFAST--TETQGLVLLEAMAAGLPVVAVDAPGLPDLVADG--ENGFLFP 327 (374)
T ss_pred ---CCC--cEEEeccCChHHHHHHHHHcCEEEeccc--ccCcChHHHHHHHcCCcEEEeCCCChhhheecC--ceeEEeC
Confidence 122 6889988776666778889999887664 578888888999999999999999988876553 6788876
Q ss_pred cc
Q 003875 669 AR 670 (790)
Q Consensus 669 ~~ 670 (790)
..
T Consensus 328 ~~ 329 (374)
T cd03817 328 PG 329 (374)
T ss_pred CC
Confidence 43
No 53
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=94.56 E-value=0.08 Score=55.90 Aligned_cols=113 Identities=17% Similarity=0.174 Sum_probs=81.7
Q ss_pred eecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCC
Q 003875 515 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD 594 (790)
Q Consensus 515 fdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~ 594 (790)
+.+++-|+..+|++.. ++..+.++ |..+++.|.-.. .+.+ +. . ..+
T Consensus 197 ~il~~G~~~~~K~~~~-li~a~~~~----------------~~~l~ivG~g~~----~~~l-~~--~----------~~~ 242 (351)
T cd03804 197 YYLSVGRLVPYKRIDL-AIEAFNKL----------------GKRLVVIGDGPE----LDRL-RA--K----------AGP 242 (351)
T ss_pred EEEEEEcCccccChHH-HHHHHHHC----------------CCcEEEEECChh----HHHH-Hh--h----------cCC
Confidence 5678999999999887 65543221 346777775321 1222 21 1 112
Q ss_pred cceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 595 LLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 595 ~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
+|.|+..-.-+-...++.+||+....|+ |..|++.+-+|..|++.|+|-.|...|+.++. ++++++.
T Consensus 243 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~---e~~g~~~~Eama~G~Pvi~~~~~~~~e~i~~~--~~G~~~~ 309 (351)
T cd03804 243 --NVTFLGRVSDEELRDLYARARAFLFPAE---EDFGIVPVEAMASGTPVIAYGKGGALETVIDG--VTGILFE 309 (351)
T ss_pred --CEEEecCCCHHHHHHHHHhCCEEEECCc---CCCCchHHHHHHcCCCEEEeCCCCCcceeeCC--CCEEEeC
Confidence 6999988766667789999999997766 99999999999999999999999888876442 5777764
No 54
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=94.25 E-value=0.5 Score=49.05 Aligned_cols=123 Identities=12% Similarity=-0.019 Sum_probs=80.6
Q ss_pred CCCCcceecccccccc--cccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhh
Q 003875 509 VSPDAMFDIQVKRIHE--YKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATV 586 (790)
Q Consensus 509 l~pd~lfdvq~kR~he--YKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~v 586 (790)
++++.....+..|... +|...+ ++..+.. ++. . . ..+.++++.|...+....
T Consensus 187 ~~~~~~~i~~~~~~~~~~~K~~~~-ll~a~~~---l~~-~--~----~~~~~~~i~G~~~~~~~~--------------- 240 (365)
T cd03825 187 LPADKKIILFGAVGGTDPRKGFDE-LIEALKR---LAE-R--W----KDDIELVVFGASDPEIPP--------------- 240 (365)
T ss_pred CCCCCeEEEEEecCCCccccCHHH-HHHHHHH---hhh-c--c----CCCeEEEEeCCCchhhhc---------------
Confidence 4455555566666655 777766 5555433 332 0 0 125688888876543221
Q ss_pred cCCcCCCCcceEEEecCCC-hhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCccee
Q 003875 587 NHDPEIGDLLKVIFVPDYN-VSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFF 665 (790)
Q Consensus 587 n~Dp~i~~~lKVvFlenY~-vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~ 665 (790)
...+ +|.|+.... -.....++..||+-...|. .|+.|.+-+-+|..|++.|++-.|...|+.... ++++
T Consensus 241 ----~~~~--~v~~~g~~~~~~~~~~~~~~ad~~l~ps~--~e~~g~~~~Eam~~g~PvI~~~~~~~~e~~~~~--~~g~ 310 (365)
T cd03825 241 ----DLPF--PVHYLGSLNDDESLALIYSAADVFVVPSL--QENFPNTAIEALACGTPVVAFDVGGIPDIVDHG--VTGY 310 (365)
T ss_pred ----cCCC--ceEecCCcCCHHHHHHHHHhCCEEEeccc--cccccHHHHHHHhcCCCEEEecCCCChhheeCC--CceE
Confidence 1122 577877765 4445567889999988665 699999999999999999999888887765432 3555
Q ss_pred ec
Q 003875 666 LF 667 (790)
Q Consensus 666 ~f 667 (790)
++
T Consensus 311 ~~ 312 (365)
T cd03825 311 LA 312 (365)
T ss_pred Ee
Confidence 44
No 55
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=94.23 E-value=0.73 Score=53.33 Aligned_cols=122 Identities=19% Similarity=0.129 Sum_probs=82.8
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 003875 514 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 593 (790)
Q Consensus 514 lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~ 593 (790)
...+++-|+.+.|+... ++..+.++ ++.. ...++++.|.. .. -..+-+++.... +.
T Consensus 320 ~~il~vGrl~~~Kg~~~-li~A~~~l---~~~~--------p~~~l~i~G~G---~~-~~~l~~~i~~~~--------l~ 375 (500)
T TIGR02918 320 FSIITASRLAKEKHIDW-LVKAVVKA---KKSV--------PELTFDIYGEG---GE-KQKLQKIINENQ--------AQ 375 (500)
T ss_pred eEEEEEeccccccCHHH-HHHHHHHH---HhhC--------CCeEEEEEECc---hh-HHHHHHHHHHcC--------CC
Confidence 46788999999999887 66665443 3201 24566666642 11 123334443321 23
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc-ccchhcccccCcceeecc
Q 003875 594 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG-ANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 594 ~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDG-a~vEi~e~~g~en~~~fG 668 (790)
+ +|.|+. + +.+++ +...||+....|. .|+-|.+-|-||..|++.|+|--| ...|+.+. ++|++++-
T Consensus 376 ~--~V~f~G-~-~~~~~-~~~~adv~v~pS~--~Egfgl~~lEAma~G~PVI~~dv~~G~~eiI~~--g~nG~lv~ 442 (500)
T TIGR02918 376 D--YIHLKG-H-RNLSE-VYKDYELYLSAST--SEGFGLTLMEAVGSGLGMIGFDVNYGNPTFIED--NKNGYLIP 442 (500)
T ss_pred C--eEEEcC-C-CCHHH-HHHhCCEEEEcCc--cccccHHHHHHHHhCCCEEEecCCCCCHHHccC--CCCEEEEe
Confidence 3 677777 4 46665 5689999998886 799999999999999999999644 67777654 37888874
No 56
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=93.49 E-value=0.37 Score=50.15 Aligned_cols=120 Identities=17% Similarity=0.085 Sum_probs=82.7
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
..++....+++-|+..+|...+ ++..+.+ |++. ....++++.|..... +.+-+++.+.
T Consensus 188 ~~~~~~~i~~vGr~~~~Kg~~~-li~a~~~---l~~~--------~~~~~l~ivG~g~~~----~~~~~~~~~~------ 245 (358)
T cd03812 188 ILEDKFVIGHVGRFSEQKNHEF-LIEIFAE---LLKK--------NPNAKLLLVGDGELE----EEIKKKVKEL------ 245 (358)
T ss_pred CCCCCEEEEEEeccccccChHH-HHHHHHH---HHHh--------CCCeEEEEEeCCchH----HHHHHHHHhc------
Confidence 5667888999999999999887 6655444 4321 124678888854321 2222222221
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhccc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 658 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~ 658 (790)
.+.+ +|.|+.- .+-...++..||+-.+.|+ .|..|.+-+-+|.-|++.|+|--|..-|+.+.
T Consensus 246 --~~~~--~v~~~g~--~~~~~~~~~~adi~v~ps~--~E~~~~~~lEAma~G~PvI~s~~~~~~~~i~~ 307 (358)
T cd03812 246 --GLED--KVIFLGV--RNDVPELLQAMDVFLFPSL--YEGLPLVLIEAQASGLPCILSDTITKEVDLTD 307 (358)
T ss_pred --CCCC--cEEEecc--cCCHHHHHHhcCEEEeccc--ccCCCHHHHHHHHhCCCEEEEcCCchhhhhcc
Confidence 1223 5777764 4444567899999998886 49999999999999999999988887776544
No 57
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=93.46 E-value=0.42 Score=53.71 Aligned_cols=124 Identities=14% Similarity=0.110 Sum_probs=81.6
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 510 ~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
.++..+.+++-|+..+|...+ ++..+ +. . ....++++|. .|.. ..+-+++ + .
T Consensus 260 ~~~~~~i~~vGrl~~~K~~~~-li~a~------~~-~--------~~~~l~ivG~-G~~~---~~l~~~~----~---~- 311 (465)
T PLN02871 260 EPEKPLIVYVGRLGAEKNLDF-LKRVM------ER-L--------PGARLAFVGD-GPYR---EELEKMF----A---G- 311 (465)
T ss_pred CCCCeEEEEeCCCchhhhHHH-HHHHH------Hh-C--------CCcEEEEEeC-ChHH---HHHHHHh----c---c-
Confidence 456778899999999998665 43322 11 1 1346888885 2211 2222222 1 1
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhccc-ccCcceeecc
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE-VGEENFFLFG 668 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~-~g~en~~~fG 668 (790)
.+|.|+.--.=+-...++.+||+-..-|. .|..|..-+-+|.-|.+.|+|-.|...|+.+. ...+|+++|.
T Consensus 312 ------~~V~f~G~v~~~ev~~~~~~aDv~V~pS~--~E~~g~~vlEAmA~G~PVI~s~~gg~~eiv~~~~~~~~G~lv~ 383 (465)
T PLN02871 312 ------TPTVFTGMLQGDELSQAYASGDVFVMPSE--SETLGFVVLEAMASGVPVVAARAGGIPDIIPPDQEGKTGFLYT 383 (465)
T ss_pred ------CCeEEeccCCHHHHHHHHHHCCEEEECCc--ccccCcHHHHHHHcCCCEEEcCCCCcHhhhhcCCCCCceEEeC
Confidence 15777653222345567899999987664 68888889999999999999988888887654 1237888885
Q ss_pred c
Q 003875 669 A 669 (790)
Q Consensus 669 ~ 669 (790)
.
T Consensus 384 ~ 384 (465)
T PLN02871 384 P 384 (465)
T ss_pred C
Confidence 3
No 58
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=93.44 E-value=0.81 Score=45.82 Aligned_cols=124 Identities=15% Similarity=0.055 Sum_probs=76.5
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 003875 512 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 591 (790)
Q Consensus 512 d~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~ 591 (790)
+....+++=|+...|.... ++..+.. +++.. ...++++.|....... +-+++...+
T Consensus 177 ~~~~i~~~g~~~~~K~~~~-l~~~~~~---l~~~~--------~~~~l~i~G~~~~~~~----~~~~~~~~~-------- 232 (348)
T cd03820 177 KSKRILAVGRLVPQKGFDL-LIEAWAK---IAKKH--------PDWKLRIVGDGPEREA----LEALIKELG-------- 232 (348)
T ss_pred CCcEEEEEEeeccccCHHH-HHHHHHH---HHhcC--------CCeEEEEEeCCCCHHH----HHHHHHHcC--------
Confidence 4456778889999998877 6655444 33211 2457888886543322 222222221
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccc-hhcccccCcceeec
Q 003875 592 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANV-EIRQEVGEENFFLF 667 (790)
Q Consensus 592 i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~v-Ei~e~~g~en~~~f 667 (790)
+.+ +|.|... .+-...++..||+-...|.. |..|++-+-+|..|++.|++-.|... |+.+. .+++++|
T Consensus 233 ~~~--~v~~~g~--~~~~~~~~~~ad~~i~ps~~--e~~~~~~~Ea~a~G~Pvi~~~~~~~~~~~~~~--~~~g~~~ 301 (348)
T cd03820 233 LED--RVILLGF--TKNIEEYYAKASIFVLTSRF--EGFPMVLLEAMAFGLPVISFDCPTGPSEIIED--GVNGLLV 301 (348)
T ss_pred CCC--eEEEcCC--cchHHHHHHhCCEEEeCccc--cccCHHHHHHHHcCCCEEEecCCCchHhhhcc--CcceEEe
Confidence 222 5666665 45556778889998876654 88999999999999999998544433 33221 1356655
No 59
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=93.29 E-value=0.91 Score=46.46 Aligned_cols=121 Identities=17% Similarity=0.136 Sum_probs=80.9
Q ss_pred CCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 510 SPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 510 ~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
+++....+++-|+..+|.... ++..+. ++++ . .+..+++.|.. |.. .-++ .
T Consensus 194 ~~~~~~i~~~G~~~~~k~~~~-~i~~~~---~l~~-~--------~~~~l~i~G~~-~~~----~~~~------~----- 244 (364)
T cd03814 194 PPDRPVLLYVGRLAPEKNLEA-LLDADL---PLRR-R--------PPVRLVIVGDG-PAR----ARLE------A----- 244 (364)
T ss_pred CCCCeEEEEEeccccccCHHH-HHHHHH---Hhhh-c--------CCceEEEEeCC-chH----HHHh------c-----
Confidence 345567788889998888766 554433 3432 1 14578888852 211 1112 1
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
..+ +|.|+.-....-...++.+||+-...+. .|.-|.+-+=+|.-|++.|++--|..-|+.++. .+++++
T Consensus 245 --~~~--~v~~~g~~~~~~~~~~~~~~d~~l~~s~--~e~~~~~~lEa~a~g~PvI~~~~~~~~~~i~~~--~~g~~~ 314 (364)
T cd03814 245 --RYP--NVHFLGFLDGEELAAAYASADVFVFPSR--TETFGLVVLEAMASGLPVVAPDAGGPADIVTDG--ENGLLV 314 (364)
T ss_pred --cCC--cEEEEeccCHHHHHHHHHhCCEEEECcc--cccCCcHHHHHHHcCCCEEEcCCCCchhhhcCC--cceEEc
Confidence 112 6888887666777788999999886654 578888889999999999999888777765442 455554
No 60
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=93.12 E-value=0.62 Score=52.07 Aligned_cols=143 Identities=16% Similarity=0.133 Sum_probs=91.5
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCc-H-HHHHHHHHHHHHhhhhcCC
Q 003875 512 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-V-QAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 512 d~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y-~-~aK~iIk~I~~va~~vn~D 589 (790)
+..+.+++=||...|+..+ ++..+..+.+- .|... ..+.+++++|.....+ . ..+.+-+++.+..
T Consensus 236 ~~~~il~vgr~~~~K~~~~-li~A~~~l~~~---~~~~~---~~~~~lvivG~~~~~~~~~~~~~L~~~~~~l~------ 302 (419)
T cd03806 236 RENQILSIAQFRPEKNHPL-QLRAFAKLLKR---LPEEI---KEKIKLVLIGSCRNEDDEKRVEDLKLLAKELG------ 302 (419)
T ss_pred CCcEEEEEEeecCCCCHHH-HHHHHHHHHHh---Ccccc---cCceEEEEEcCCCCcccHHHHHHHHHHHHHhC------
Confidence 3457888889999999988 77776655432 11100 0134666666543332 2 2233333443322
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc-ccchhcccc-cCcceeec
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG-ANVEIRQEV-GEENFFLF 667 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDG-a~vEi~e~~-g~en~~~f 667 (790)
+.+ +|.|+.+-.-+--..++..||+..+.|.. |.=|-+-.-+|.-|++.|++-.| ..-||.+.. +++++|++
T Consensus 303 --l~~--~V~f~g~v~~~~l~~~l~~adv~v~~s~~--E~Fgi~~lEAMa~G~pvIa~~~ggp~~~iv~~~~~g~~G~l~ 376 (419)
T cd03806 303 --LED--KVEFVVNAPFEELLEELSTASIGLHTMWN--EHFGIGVVEYMAAGLIPLAHASGGPLLDIVVPWDGGPTGFLA 376 (419)
T ss_pred --CCC--eEEEecCCCHHHHHHHHHhCeEEEECCcc--CCcccHHHHHHHcCCcEEEEcCCCCchheeeccCCCCceEEe
Confidence 334 79999876556666788999999987764 88899999999999999988654 444565411 34788887
Q ss_pred ccchhhh
Q 003875 668 GARAHEI 674 (790)
Q Consensus 668 G~~~~ev 674 (790)
. +.+++
T Consensus 377 ~-d~~~l 382 (419)
T cd03806 377 S-TAEEY 382 (419)
T ss_pred C-CHHHH
Confidence 4 44433
No 61
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=92.52 E-value=0.48 Score=47.72 Aligned_cols=129 Identities=16% Similarity=0.112 Sum_probs=86.4
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
.+.+....+++-|+...|.... ++..+.+ +.+ . ..+..+++.|...+. +.+.+++...
T Consensus 198 ~~~~~~~i~~~g~~~~~k~~~~-li~~~~~---~~~-~-------~~~~~l~i~g~~~~~----~~~~~~~~~~------ 255 (377)
T cd03798 198 LPEDKKVILFVGRLVPRKGIDY-LIEALAR---LLK-K-------RPDVHLVIVGDGPLR----EALEALAAEL------ 255 (377)
T ss_pred CCCCceEEEEeccCccccCHHH-HHHHHHH---HHh-c-------CCCeEEEEEcCCcch----HHHHHHHHhc------
Confidence 3456678889999999887666 6554433 432 1 125688898875432 2233333221
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
...+ .|.|++..+=+-...++..||+....|.. |+.|++-+-+|.-|++.|++-.|+.-|+.++. .++++|
T Consensus 256 --~~~~--~v~~~g~~~~~~~~~~~~~ad~~i~~~~~--~~~~~~~~Ea~~~G~pvI~~~~~~~~~~~~~~--~~g~~~ 326 (377)
T cd03798 256 --GLED--RVTFLGAVPHEEVPAYYAAADVFVLPSLR--EGFGLVLLEAMACGLPVVATDVGGIPEIITDG--ENGLLV 326 (377)
T ss_pred --CCcc--eEEEeCCCCHHHHHHHHHhcCeeecchhh--ccCChHHHHHHhcCCCEEEecCCChHHHhcCC--cceeEE
Confidence 1222 57777765545556778889999887766 99999999999999999999888887765443 334544
No 62
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=92.40 E-value=1.3 Score=45.96 Aligned_cols=113 Identities=15% Similarity=0.106 Sum_probs=71.7
Q ss_pred eecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCC
Q 003875 515 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD 594 (790)
Q Consensus 515 fdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~ 594 (790)
+.+++=|+.++|...+ ++..+. ++.. ...+++.|.........+.+.+ .. ...+
T Consensus 195 ~i~~~G~~~~~Kg~~~-li~a~~---~l~~-----------~~~l~ivG~~~~~~~~~~~~~~----~~-------~~~~ 248 (363)
T cd04955 195 YYLLVGRIVPENNIDD-LIEAFS---KSNS-----------GKKLVIVGNADHNTPYGKLLKE----KA-------AADP 248 (363)
T ss_pred EEEEEecccccCCHHH-HHHHHH---hhcc-----------CceEEEEcCCCCcchHHHHHHH----Hh-------CCCC
Confidence 4678899999999887 655432 2221 2468888877544433333332 11 1122
Q ss_pred cceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhc
Q 003875 595 LLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIR 656 (790)
Q Consensus 595 ~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~ 656 (790)
+|.|+.-..=.-...++..||+..-.|. ..|..|.+-+-+|.-|++.|+|-.|...|+.
T Consensus 249 --~V~~~g~~~~~~~~~~~~~ad~~v~ps~-~~e~~~~~~~EAma~G~PvI~s~~~~~~e~~ 307 (363)
T cd04955 249 --RIIFVGPIYDQELLELLRYAALFYLHGH-SVGGTNPSLLEAMAYGCPVLASDNPFNREVL 307 (363)
T ss_pred --cEEEccccChHHHHHHHHhCCEEEeCCc-cCCCCChHHHHHHHcCCCEEEecCCccceee
Confidence 5888765333333345566677654443 3488888889999999999999888777655
No 63
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=91.83 E-value=0.86 Score=46.40 Aligned_cols=125 Identities=13% Similarity=0.020 Sum_probs=85.9
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003875 511 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 511 pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp 590 (790)
.+....+++-|+...|...+ ++..+..+.+ ....+++.|.....+..-+.. +
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~-li~~~~~l~~-------------~~~~l~i~G~~~~~~~~~~~~-------~------- 240 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDL-LLEAFKRLPR-------------GDIELVIVGNGLELEEESYEL-------E------- 240 (359)
T ss_pred CCceEEEEEecCccccCHHH-HHHHHHHHHh-------------cCcEEEEEcCchhhhHHHHhh-------c-------
Confidence 45567788889999998876 6655544322 134677888765554433222 1
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 591 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 591 ~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
..+ .|.|+..+.-.....++..||+-...|. ..|..|.+-+-+|.-|.+.|+|--|..-|+.+.. .++++|..
T Consensus 241 -~~~--~v~~~g~~~~~~~~~~~~~ad~~i~ps~-~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~--~~g~~~~~ 313 (359)
T cd03823 241 -GDP--RVEFLGAYPQEEIDDFYAEIDVLVVPSI-WPENFPLVIREALAAGVPVIASDIGGMAELVRDG--VNGLLFPP 313 (359)
T ss_pred -CCC--eEEEeCCCCHHHHHHHHHhCCEEEEcCc-ccCCCChHHHHHHHCCCCEEECCCCCHHHHhcCC--CcEEEECC
Confidence 112 6888888877777778999999886543 3577888888899999999999777776665432 46777654
No 64
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=90.92 E-value=0.66 Score=56.04 Aligned_cols=127 Identities=17% Similarity=0.215 Sum_probs=87.1
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003875 511 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 511 pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp 590 (790)
.+.+.++++-|+.+.|.+.+ ++..+.++.+ + . ....+++.|.. | .-..+-+++.+.+
T Consensus 515 ~~~~vIg~VGRL~~~KG~~~-LI~A~a~l~~--~-~--------p~~~LvIvG~G-~---~~~~L~~l~~~lg------- 571 (694)
T PRK15179 515 DARFTVGTVMRVDDNKRPFL-WVEAAQRFAA--S-H--------PKVRFIMVGGG-P---LLESVREFAQRLG------- 571 (694)
T ss_pred CCCeEEEEEEeCCccCCHHH-HHHHHHHHHH--H-C--------cCeEEEEEccC-c---chHHHHHHHHHcC-------
Confidence 34667889999999999988 6665544421 1 1 13568788753 1 1233444444432
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 591 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 591 ~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
+.+ +|.|+. |.=.+ ..++.++|+....|. .|..|.+=+-+|..|.+.|+|--|..-|+.++. .|++++..
T Consensus 572 -L~~--~V~flG-~~~dv-~~ll~aaDv~VlpS~--~Egfp~vlLEAMA~G~PVVat~~gG~~EiV~dg--~~GlLv~~ 641 (694)
T PRK15179 572 -MGE--RILFTG-LSRRV-GYWLTQFNAFLLLSR--FEGLPNVLIEAQFSGVPVVTTLAGGAGEAVQEG--VTGLTLPA 641 (694)
T ss_pred -CCC--cEEEcC-CcchH-HHHHHhcCEEEeccc--cccchHHHHHHHHcCCeEEEECCCChHHHccCC--CCEEEeCC
Confidence 333 566655 43234 467899999998885 699999999999999999999888778776543 67888753
No 65
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=90.70 E-value=0.88 Score=46.89 Aligned_cols=122 Identities=13% Similarity=0.047 Sum_probs=81.9
Q ss_pred eecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCC
Q 003875 515 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGD 594 (790)
Q Consensus 515 fdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~ 594 (790)
+.+++=|+...|++.+ ++... +. ....+++.|.........+. +..... +.+
T Consensus 173 ~i~~~Gr~~~~Kg~~~-li~~~------~~----------~~~~l~i~G~~~~~~~~~~~----~~~~~~-------~~~ 224 (335)
T cd03802 173 YLLFLGRISPEKGPHL-AIRAA------RR----------AGIPLKLAGPVSDPDYFYRE----IAPELL-------DGP 224 (335)
T ss_pred EEEEEEeeccccCHHH-HHHHH------Hh----------cCCeEEEEeCCCCHHHHHHH----HHHhcc-------cCC
Confidence 5678889999999987 55432 11 12467788876443332222 211110 223
Q ss_pred cceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 595 LLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 595 ~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
+|.|+..-+=.-...++.++|+....|+ ..|.+|.+-+-+|--|++.|+|--|...|+.+.. .|++++..
T Consensus 225 --~v~~~G~~~~~~~~~~~~~~d~~v~ps~-~~E~~~~~~lEAma~G~PvI~~~~~~~~e~i~~~--~~g~l~~~ 294 (335)
T cd03802 225 --DIEYLGEVGGAEKAELLGNARALLFPIL-WEEPFGLVMIEAMACGTPVIAFRRGAVPEVVEDG--VTGFLVDS 294 (335)
T ss_pred --cEEEeCCCCHHHHHHHHHhCcEEEeCCc-ccCCcchHHHHHHhcCCCEEEeCCCCchhheeCC--CcEEEeCC
Confidence 6888876443334467899999997654 5699999999999999999999888888876542 58888754
No 66
>PRK10307 putative glycosyl transferase; Provisional
Probab=90.27 E-value=2.6 Score=46.09 Aligned_cols=126 Identities=11% Similarity=0.121 Sum_probs=78.1
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
++++....+++-|+.++|.... ++..+. ++++ . .+..+++.|.- |. -..+.+++....
T Consensus 225 ~~~~~~~i~~~G~l~~~kg~~~-li~a~~---~l~~-~--------~~~~l~ivG~g-~~---~~~l~~~~~~~~----- 282 (412)
T PRK10307 225 LPDGKKIVLYSGNIGEKQGLEL-VIDAAR---RLRD-R--------PDLIFVICGQG-GG---KARLEKMAQCRG----- 282 (412)
T ss_pred CCCCCEEEEEcCccccccCHHH-HHHHHH---Hhcc-C--------CCeEEEEECCC-hh---HHHHHHHHHHcC-----
Confidence 5667788889999999997766 555443 3432 1 13678888842 21 123333443221
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCc-c---chhhcccceEeeeccccc--chhcccccCc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTS-N---MKFAMNGCILIGTLDGAN--VEIRQEVGEE 662 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTs-n---MKfamNG~l~lgtlDGa~--vEi~e~~g~e 662 (790)
+. +|.|+....-+-...++.+||+-...|+. |+.|.+ . .-+|..|++.|+|-.|-. -|+.+ +
T Consensus 283 ---l~---~v~f~G~~~~~~~~~~~~~aDi~v~ps~~--e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~~~i~----~ 350 (412)
T PRK10307 283 ---LP---NVHFLPLQPYDRLPALLKMADCHLLPQKA--GAADLVLPSKLTNMLASGRNVVATAEPGTELGQLVE----G 350 (412)
T ss_pred ---CC---ceEEeCCCCHHHHHHHHHhcCEeEEeecc--CcccccCcHHHHHHHHcCCCEEEEeCCCchHHHHHh----C
Confidence 11 48888765666677788999998876653 555432 2 347889999999966432 23332 4
Q ss_pred ceeecc
Q 003875 663 NFFLFG 668 (790)
Q Consensus 663 n~~~fG 668 (790)
|+++|.
T Consensus 351 ~G~~~~ 356 (412)
T PRK10307 351 IGVCVE 356 (412)
T ss_pred CcEEeC
Confidence 666664
No 67
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=89.45 E-value=1.9 Score=48.02 Aligned_cols=141 Identities=15% Similarity=0.168 Sum_probs=88.9
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003875 511 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 511 pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp 590 (790)
++..+.+.+-|+++.|.... ++..+.++.+... .... .....+++.|.. |. -..+.+++.+.+
T Consensus 230 ~~~~vi~~~grl~~~K~~~~-li~A~~~l~~~~~-~~~~----~~~i~l~ivG~G-~~---~~~l~~~~~~~~------- 292 (415)
T cd03816 230 ERPALLVSSTSWTPDEDFGI-LLDALVAYEKSAA-TGPK----LPKLLCIITGKG-PL---KEKYLERIKELK------- 292 (415)
T ss_pred CCceEEEEeccccCCCCHHH-HHHHHHHHHHhhc-cccc----CCCEEEEEEecC-cc---HHHHHHHHHHcC-------
Confidence 34456667889999998887 7777666544321 0000 112678888863 21 344555554332
Q ss_pred CCCCcceEEEecCC-ChhhhhhhccccccccccCCC-ccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 591 EIGDLLKVIFVPDY-NVSVAELLIPASELSQHISTA-GMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 591 ~i~~~lKVvFlenY-~vslAe~lipa~Dls~~ista-g~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
+. .++|+..| .-+-...++.+||+..-.+.. ..|.-|..-+-+|.=|.+.|+|--|..-|+.++. .|+++++
T Consensus 293 -l~---~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~~~~eiv~~~--~~G~lv~ 366 (415)
T cd03816 293 -LK---KVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFKCIDELVKHG--ENGLVFG 366 (415)
T ss_pred -CC---cEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHcCCCEEEeCCCCHHHHhcCC--CCEEEEC
Confidence 22 38887765 556666799999998621111 1233455567788999999999888888887653 7899996
Q ss_pred cchhhhh
Q 003875 669 ARAHEIA 675 (790)
Q Consensus 669 ~~~~ev~ 675 (790)
+.++++
T Consensus 367 -d~~~la 372 (415)
T cd03816 367 -DSEELA 372 (415)
T ss_pred -CHHHHH
Confidence 555554
No 68
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=89.36 E-value=4.1 Score=45.25 Aligned_cols=129 Identities=16% Similarity=0.089 Sum_probs=79.3
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 003875 512 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 591 (790)
Q Consensus 512 d~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~ 591 (790)
+....+++-|+...|+..+ ++..+.++ ++..|. ....+++.|... .-..+.+++....
T Consensus 229 ~~~~il~~Grl~~~Kg~~~-li~a~~~l---~~~~p~------~~l~~~iiG~g~----~~~~l~~~~~~~~-------- 286 (407)
T cd04946 229 DTLRIVSCSYLVPVKRVDL-IIKALAAL---AKARPS------IKIKWTHIGGGP----LEDTLKELAESKP-------- 286 (407)
T ss_pred CCEEEEEeeccccccCHHH-HHHHHHHH---HHhCCC------ceEEEEEEeCch----HHHHHHHHHHhcC--------
Confidence 3456888999999999876 66555444 321111 123455555422 1223334433111
Q ss_pred CCCcceEEEecCCC-hhhhhhhcc-ccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 592 IGDLLKVIFVPDYN-VSVAELLIP-ASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 592 i~~~lKVvFlenY~-vslAe~lip-a~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
..+ +|.|+.-.. -.+.+.+-. .+|+--+.| ..|+-|.+-|-+|.-|.+.|+|--|...|+.++. +|++++-
T Consensus 287 ~~~--~V~f~G~v~~~e~~~~~~~~~~~v~v~~S--~~Eg~p~~llEAma~G~PVIas~vgg~~e~i~~~--~~G~l~~ 359 (407)
T cd04946 287 ENI--SVNFTGELSNSEVYKLYKENPVDVFVNLS--ESEGLPVSIMEAMSFGIPVIATNVGGTPEIVDNG--GNGLLLS 359 (407)
T ss_pred CCc--eEEEecCCChHHHHHHHhhcCCCEEEeCC--ccccccHHHHHHHHcCCCEEeCCCCCcHHHhcCC--CcEEEeC
Confidence 122 677765433 234444433 467766555 4788899999999999999999889888876542 5777764
No 69
>PHA01630 putative group 1 glycosyl transferase
Probab=87.58 E-value=2.5 Score=46.27 Aligned_cols=118 Identities=9% Similarity=-0.020 Sum_probs=76.5
Q ss_pred cceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCC
Q 003875 513 AMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 592 (790)
Q Consensus 513 ~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i 592 (790)
.+..++++|++++|...+ ++..+.+ +++ . .....+++.|. -+. ..++. . +
T Consensus 142 ~~vl~~~g~~~~~Kg~d~-Li~A~~~---l~~-~-------~~~~~llivG~-~~~---~~~l~----~----------~ 191 (331)
T PHA01630 142 PCVLAILPHSWDRKGGDI-VVKIFHE---LQN-E-------GYDFYFLIKSS-NML---DPRLF----G----------L 191 (331)
T ss_pred CEEEEEeccccccCCHHH-HHHHHHH---HHh-h-------CCCEEEEEEeC-ccc---chhhc----c----------c
Confidence 346678999999998876 6555433 432 1 11356666772 111 11110 0 1
Q ss_pred CCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 593 GDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 593 ~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
.+ ..-+++ -+--..++.+||+....|+ .|+-|..-.-+|.-|++.|+|-.|.+-|+.++ ++|++++..
T Consensus 192 ~~--~~~~v~---~~~l~~~y~~aDv~v~pS~--~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~--~~ng~lv~~ 259 (331)
T PHA01630 192 NG--VKTPLP---DDDIYSLFAGCDILFYPVR--GGAFEIPVIEALALGLDVVVTEKGAWSEWVLS--NLDVYWIKS 259 (331)
T ss_pred cc--eeccCC---HHHHHHHHHhCCEEEECCc--cccCChHHHHHHHcCCCEEEeCCCCchhhccC--CCceEEeee
Confidence 11 011222 2334557899999999998 49999999999999999999999988887644 378888754
No 70
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=86.36 E-value=15 Score=41.99 Aligned_cols=132 Identities=12% Similarity=-0.006 Sum_probs=79.8
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCc-HHHHHHHHHHHHHhhhhcCC
Q 003875 511 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-VQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 511 pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y-~~aK~iIk~I~~va~~vn~D 589 (790)
++..+++++-|+...|...+ +|..+.++ ++..|.-+ ..++++..|...-++ ..-+++.+.|.+.+..+|..
T Consensus 262 ~~~~~il~vgRl~~~Kgi~~-ll~A~~~l---l~~~p~~~----~~v~Lv~vg~~~~g~~~~~~~l~~~l~~~v~~in~~ 333 (460)
T cd03788 262 GGRKLIVGVDRLDYSKGIPE-RLLAFERL---LERYPEWR----GKVVLVQIAVPSRTDVPEYQELRREVEELVGRINGK 333 (460)
T ss_pred CCCEEEEEecCccccCCHHH-HHHHHHHH---HHhChhhc----CCEEEEEEccCCCcCcHHHHHHHHHHHHHHHHHHhc
Confidence 46677899999999999877 66665554 32133211 124555544433222 22345666666666656531
Q ss_pred cCCCCcceEEEecCC-ChhhhhhhccccccccccCCCccccCCCccchhhcccce-----Eeeeccccc
Q 003875 590 PEIGDLLKVIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCI-----LIGTLDGAN 652 (790)
Q Consensus 590 p~i~~~lKVvFlenY-~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l-----~lgtlDGa~ 652 (790)
-...+.-.|+|+..+ +-+-...+..+||+-...|++ |+=|..-+-+|.=|.. .+|..-|.-
T Consensus 334 ~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~--Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~ 400 (460)
T cd03788 334 FGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLR--DGMNLVAKEYVACQDDDPGVLILSEFAGAA 400 (460)
T ss_pred cCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccc--cccCcccceeEEEecCCCceEEEeccccch
Confidence 111112247777543 555566678999999998874 8778777777777774 666555543
No 71
>PHA01633 putative glycosyl transferase group 1
Probab=81.97 E-value=16 Score=40.84 Aligned_cols=122 Identities=16% Similarity=0.080 Sum_probs=81.2
Q ss_pred CCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003875 511 PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 511 pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp 590 (790)
|+.+..+++-|++.+|.+.+ ++..+.++.+- .+.-. ...++++.|. + .+.+.
T Consensus 146 ~~~~~i~~vGRl~~~KG~~~-LI~A~~~L~~~---~p~~~----~~i~l~ivG~--------~----~~~~l-------- 197 (335)
T PHA01633 146 PDTIKFGIVSGLTKRKNMDL-MLQVFNELNTK---YPDIA----KKIHFFVISH--------K----QFTQL-------- 197 (335)
T ss_pred CCCeEEEEEeCCccccCHHH-HHHHHHHHHHh---CCCcc----ccEEEEEEcH--------H----HHHHc--------
Confidence 36677888999999999998 77776554321 11100 0235666662 1 11111
Q ss_pred CCCCcceEEEecCCC---hhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 591 EIGDLLKVIFVPDYN---VSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 591 ~i~~~lKVvFlenY~---vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
.+.+ +|.|+-.+. -+-...++.+||+-..-|+ .|+.|-.-+-+|--|++.|++--|...|+. |....++|
T Consensus 198 ~l~~--~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~--~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~---g~~~~~Li 270 (335)
T PHA01633 198 EVPA--NVHFVAEFGHNSREYIFAFYGAMDFTIVPSG--TEGFGMPVLESMAMGTPVIHQLMPPLDEFT---SWQWNLLI 270 (335)
T ss_pred CCCC--cEEEEecCCCCCHHHHHHHHHhCCEEEECCc--cccCCHHHHHHHHcCCCEEEccCCCceeec---CCccceee
Confidence 1333 688875332 2334568899999998887 599999999999999999999888888764 33333565
No 72
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=78.43 E-value=18 Score=39.69 Aligned_cols=109 Identities=6% Similarity=0.012 Sum_probs=64.4
Q ss_pred CCcceecccccccccccccchhhhHHH-HHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 511 PDAMFDIQVKRIHEYKRQLMNILGIVY-RYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 511 pd~lfdvq~kR~heYKRq~Lnil~ii~-ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
++..+.+++=|+..+|.... ++..+. -+.++++.. ....+++.|.... +. +.+.+. .
T Consensus 222 ~~~~~ilf~G~l~~~k~~~~-l~~~~~~~~~~l~~~~--------p~~~l~ivG~g~~-----~~----~~~l~~----~ 279 (397)
T TIGR03087 222 PGKRVLVFTGAMDYWPNIDA-VVWFAERVFPAVRARR--------PAAEFYIVGAKPS-----PA----VRALAA----L 279 (397)
T ss_pred CCCcEEEEEEecCCccCHHH-HHHHHHHHHHHHHHHC--------CCcEEEEECCCCh-----HH----HHHhcc----C
Confidence 45567888999999987765 443332 233444311 1356777776432 11 222221 1
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 650 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDG 650 (790)
+ .|.|+..-+ .+ ..++.+||+...-|+. .|..|..-+-+|.-|++.|+|-.|
T Consensus 280 ~------~V~~~G~v~-~~-~~~~~~adv~v~Ps~~-~eG~~~~~lEAma~G~PVV~t~~~ 331 (397)
T TIGR03087 280 P------GVTVTGSVA-DV-RPYLAHAAVAVAPLRI-ARGIQNKVLEAMAMAKPVVASPEA 331 (397)
T ss_pred C------CeEEeeecC-CH-HHHHHhCCEEEecccc-cCCcccHHHHHHHcCCCEEecCcc
Confidence 1 366664332 33 4577999999876542 244444567789999999999654
No 73
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=78.13 E-value=5.8 Score=41.15 Aligned_cols=125 Identities=16% Similarity=0.139 Sum_probs=81.3
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
++++..+.+++=|+...|...+ ++..+. ++++. ..+.++++.|. .|. .+.+.+++....
T Consensus 184 ~~~~~~~~l~~g~~~~~kg~~~-li~a~~---~l~~~--------~~~~~l~i~G~-g~~---~~~~~~~~~~~~----- 242 (360)
T cd04951 184 VKNDTFVILAVGRLVEAKDYPN-LLKAFA---KLLSD--------YLDIKLLIAGD-GPL---RATLERLIKALG----- 242 (360)
T ss_pred cCCCCEEEEEEeeCchhcCcHH-HHHHHH---HHHhh--------CCCeEEEEEcC-CCc---HHHHHHHHHhcC-----
Confidence 4567778888999999888876 555443 34321 12467888884 221 244444444332
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
..+ +|.|+.. ++-...++.+||+-...|+ .|..|..-+=+|.-|++.|++--|..-|+.++ ++++|
T Consensus 243 ---~~~--~v~~~g~--~~~~~~~~~~ad~~v~~s~--~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~----~g~~~ 308 (360)
T cd04951 243 ---LSN--RVKLLGL--RDDIAAYYNAADLFVLSSA--WEGFGLVVAEAMACELPVVATDAGGVREVVGD----SGLIV 308 (360)
T ss_pred ---CCC--cEEEecc--cccHHHHHHhhceEEeccc--ccCCChHHHHHHHcCCCEEEecCCChhhEecC----CceEe
Confidence 122 5777763 3334457899999876655 38888888899999999999977777776543 55544
No 74
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=77.17 E-value=1.1e+02 Score=35.42 Aligned_cols=134 Identities=13% Similarity=0.122 Sum_probs=76.7
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEee-cCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003875 512 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGG-KAFATYVQAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 512 d~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaG-KA~P~y~~aK~iIk~I~~va~~vn~Dp 590 (790)
+...++.|-|++.-|.... +|..+.++. ++ .|..+ ..+++|..| ........-.++.+.|.+.+..||..-
T Consensus 258 ~~~vIl~VgRLd~~KGi~~-ll~A~~~ll--~~-~p~~~----~~v~Lv~v~~p~rg~~~~~~~l~~~i~~lv~~in~~~ 329 (456)
T TIGR02400 258 GRKLIIGVDRLDYSKGLPE-RLLAFERFL--EE-HPEWR----GKVVLVQIAVPSRGDVPEYQQLRRQVEELVGRINGRF 329 (456)
T ss_pred CCeEEEEccccccccCHHH-HHHHHHHHH--Hh-Ccccc----CceEEEEEecCCccCchHHHHHHHHHHHHHHHHHhcc
Confidence 4567889999999998877 777666653 22 33321 123455443 222122223456666776666666421
Q ss_pred CCCCcceEEEecC-CChhhhhhhccccccccccCCCccccCCCccchhhcc-----cceEeeecccccchh
Q 003875 591 EIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMN-----GCILIGTLDGANVEI 655 (790)
Q Consensus 591 ~i~~~lKVvFlen-Y~vslAe~lipa~Dls~~istag~EASGTsnMKfamN-----G~l~lgtlDGa~vEi 655 (790)
..-+...|+|+.. .+-+---.+..+|||-.-+|.+ |.-|..-+-+|.- |++.+|...|+--++
T Consensus 330 ~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~--EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~~l 398 (456)
T TIGR02400 330 GTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLR--DGMNLVAKEYVAAQDPKDGVLILSEFAGAAQEL 398 (456)
T ss_pred CCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccc--cccCccHHHHHHhcCCCCceEEEeCCCCChHHh
Confidence 1112234777764 3344445578999998887764 5544444444433 556888888876544
No 75
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=76.09 E-value=6.3 Score=35.85 Aligned_cols=103 Identities=17% Similarity=0.071 Sum_probs=58.1
Q ss_pred Ccceecccccccccccccchhhh-HHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003875 512 DAMFDIQVKRIHEYKRQLMNILG-IVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 512 d~lfdvq~kR~heYKRq~Lnil~-ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp 590 (790)
|.++.+.+-+++.+|.-.. ++. .+.+ +++. ..+.++++.|...+ + ++.. .
T Consensus 1 ~~~~i~~~g~~~~~k~~~~-li~~~~~~---l~~~--------~p~~~l~i~G~~~~------~-l~~~--~-------- 51 (135)
T PF13692_consen 1 DILYIGYLGRIRPDKGLEE-LIEAALER---LKEK--------HPDIELIIIGNGPD------E-LKRL--R-------- 51 (135)
T ss_dssp --EEEE--S-SSGGGTHHH-HHH-HHHH---HHHH--------STTEEEEEECESS-------H-HCCH--H--------
T ss_pred Ccccccccccccccccccc-hhhhHHHH---HHHH--------CcCEEEEEEeCCHH------H-HHHh--c--------
Confidence 4567888889988888776 555 5444 4321 22468888888433 1 2211 0
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc
Q 003875 591 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 650 (790)
Q Consensus 591 ~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDG 650 (790)
.-+|.|++.. +-...++.+||+..... ..-+.+++.-+-+|..|++.|++-.|
T Consensus 52 ----~~~v~~~g~~--~e~~~~l~~~dv~l~p~-~~~~~~~~k~~e~~~~G~pvi~~~~~ 104 (135)
T PF13692_consen 52 ----RPNVRFHGFV--EELPEILAAADVGLIPS-RFNEGFPNKLLEAMAAGKPVIASDNG 104 (135)
T ss_dssp ----HCTEEEE-S---HHHHHHHHC-SEEEE-B-SS-SCC-HHHHHHHCTT--EEEEHHH
T ss_pred ----CCCEEEcCCH--HHHHHHHHhCCEEEEEe-eCCCcCcHHHHHHHHhCCCEEECCcc
Confidence 1168998887 33455678899999644 33446677778899999999998663
No 76
>PLN02275 transferase, transferring glycosyl groups
Probab=72.78 E-value=21 Score=39.05 Aligned_cols=142 Identities=13% Similarity=0.119 Sum_probs=85.7
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChh--h---hh-ccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhc
Q 003875 514 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAV--E---RK-AKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVN 587 (790)
Q Consensus 514 lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~--~---r~-~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn 587 (790)
.+.+.+-|+...|.... ++..+.++......-.. . ++ .......+++.|.- |. -.++-+++.+.+
T Consensus 214 ~~i~~~grl~~~k~~~~-li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~i~l~ivG~G-~~---~~~l~~~~~~~~---- 284 (371)
T PLN02275 214 ALVVSSTSWTPDEDFGI-LLEAAVMYDRRVAARLNESDSASGKQSLYPRLLFIITGKG-PQ---KAMYEEKISRLN---- 284 (371)
T ss_pred EEEEEeCceeccCCHHH-HHHHHHHHHhhhhhccccccccccccccCCCeEEEEEeCC-CC---HHHHHHHHHHcC----
Confidence 34556789999999876 66655555322100000 0 00 00123678888864 22 133444444332
Q ss_pred CCcCCCCcceEEEecCC-ChhhhhhhccccccccccCC-CccccCCCccchhhcccceEeeecccccchhcccccCccee
Q 003875 588 HDPEIGDLLKVIFVPDY-NVSVAELLIPASELSQHIST-AGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFF 665 (790)
Q Consensus 588 ~Dp~i~~~lKVvFlenY-~vslAe~lipa~Dls~~ist-ag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~ 665 (790)
+. .|+|++.| .-+-...++.+||+..-.+. ..-|..|++-+-+|.-|.+.|+|-.|..-|+.++. .|++
T Consensus 285 ----l~---~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~gg~~eiv~~g--~~G~ 355 (371)
T PLN02275 285 ----LR---HVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYSCIGELVKDG--KNGL 355 (371)
T ss_pred ----CC---ceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHCCCCEEEecCCChHHHccCC--CCeE
Confidence 22 38887764 44555677899999863211 11266677788899999999999999988887653 7899
Q ss_pred ecccchhhh
Q 003875 666 LFGARAHEI 674 (790)
Q Consensus 666 ~fG~~~~ev 674 (790)
++. +.+++
T Consensus 356 lv~-~~~~l 363 (371)
T PLN02275 356 LFS-SSSEL 363 (371)
T ss_pred EEC-CHHHH
Confidence 987 34443
No 77
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=68.99 E-value=4.1 Score=42.79 Aligned_cols=103 Identities=12% Similarity=0.104 Sum_probs=53.6
Q ss_pred EEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCC-CccccccchhhhhhhhhhchHHHHHHHHHHhcC
Q 003875 94 INLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGD-ESVEGKVLRLKQQYTLCSASLQDIIARFEKRSG 172 (790)
Q Consensus 94 ~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D-~~~~GkelRLkQeyfl~saslqdiirrf~~~~g 172 (790)
..+++|.... +.++.+.++...|.. | ..+|+.. ..+.....|. .||+-|.++
T Consensus 73 ~~~~v~~~~~--~~v~v~~i~~~~~f~--------r---~~iY~~~~~~~~d~~~rf---~~fs~a~le----------- 125 (245)
T PF08323_consen 73 YEVRVYRYPV--DGVPVYFIDNPEYFD--------R---PGIYGDNGGDYPDNAERF---AFFSRAALE----------- 125 (245)
T ss_dssp --EEEEEEEE--TTEEEEEEESHHHHG--------S---SSSSBSTSSBHTTHHHHH---HHHHHHHHH-----------
T ss_pred eEEEEEEEEc--CCccEEEecChhhcc--------c---cceeccCCCcchhHHHHH---HHHHHHHHH-----------
Confidence 4577888764 356766666655432 1 1288651 0011112343 377776553
Q ss_pred cccccccCC-CCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcc
Q 003875 173 ANVNWEEFP-EKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEA 234 (790)
Q Consensus 173 G~~~l~~lp-~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpea 234 (790)
.+..++ .+.+||+||-|.+++.+.|- ..- ..+.. .....++||-|...-.|
T Consensus 126 ---~~~~l~~~pDIIH~hDW~tal~p~~lk-~~~-----~~~~~--~~~~~~v~TIHN~~yqg 177 (245)
T PF08323_consen 126 ---LLKKLGWKPDIIHCHDWHTALAPLYLK-ERY-----QQDPF--FANIPTVFTIHNLEYQG 177 (245)
T ss_dssp ---HHCTCT-S-SEEEEECGGGTTHHHHHH-HCC-----SS--------SEEEEEESSTT---
T ss_pred ---HHHhhCCCCCEEEecCchHHHHHHHhc-ccc-----ccccc--cccceeEEEEcccccCC
Confidence 344443 56699999999999887653 221 11111 22567899999955444
No 78
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=65.64 E-value=28 Score=37.64 Aligned_cols=125 Identities=12% Similarity=0.042 Sum_probs=75.2
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 003875 514 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 593 (790)
Q Consensus 514 lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~ 593 (790)
...+++=|+..+|..-+ ...+..+.+++ .+..+++.|.. |... .+-+++.... +.
T Consensus 181 ~~i~~~Grl~~~~~k~~--~~l~~a~~~~~-----------~~~~l~ivG~g-~~~~---~l~~~~~~~~--------l~ 235 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNV--KELFDGLSQTT-----------GEWQLHIIGDG-SDFE---KCKAYSRELG--------IE 235 (359)
T ss_pred cEEEEEEEEecccCcCH--HHHHHHHHhhC-----------CCeEEEEEeCC-ccHH---HHHHHHHHcC--------CC
Confidence 44567778876643322 22233333332 14578888754 3222 2333332221 23
Q ss_pred CcceEEEecCCCh--hhhhhhccccccccccCCCccccCCCccchhhcccceEeeec-ccccchhcccccCcceeeccc
Q 003875 594 DLLKVIFVPDYNV--SVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTL-DGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 594 ~~lKVvFlenY~v--slAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtl-DGa~vEi~e~~g~en~~~fG~ 669 (790)
+ +|.|+.--+. +.....+..||+....|. .|+-|.+-.-+|--|.+.|+|- .|...|+.+. ..|++++..
T Consensus 236 ~--~v~f~G~~~~~~~~~~~~~~~~d~~v~~s~--~Egf~~~~lEAma~G~Pvv~s~~~~g~~eiv~~--~~~G~lv~~ 308 (359)
T PRK09922 236 Q--RIIWHGWQSQPWEVVQQKIKNVSALLLTSK--FEGFPMTLLEAMSYGIPCISSDCMSGPRDIIKP--GLNGELYTP 308 (359)
T ss_pred C--eEEEecccCCcHHHHHHHHhcCcEEEECCc--ccCcChHHHHHHHcCCCEEEeCCCCChHHHccC--CCceEEECC
Confidence 3 6888865332 333345567899998775 5988999999999999999996 5666676654 358888753
No 79
>PRK10125 putative glycosyl transferase; Provisional
Probab=41.68 E-value=71 Score=36.05 Aligned_cols=55 Identities=13% Similarity=-0.050 Sum_probs=46.4
Q ss_pred hhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 610 ELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 610 e~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
..++.+||+....|. .|+-|+..+-+|.-|.+.|+|-=|...|+.+. .|++++..
T Consensus 301 ~~~y~~aDvfV~pS~--~Egfp~vilEAmA~G~PVVat~~gG~~Eiv~~---~~G~lv~~ 355 (405)
T PRK10125 301 MSALNQMDALVFSSR--VDNYPLILCEALSIGVPVIATHSDAAREVLQK---SGGKTVSE 355 (405)
T ss_pred HHHHHhCCEEEECCc--cccCcCHHHHHHHcCCCEEEeCCCChHHhEeC---CcEEEECC
Confidence 456789999998776 79999999999999999999988887877643 48888864
No 80
>PLN02501 digalactosyldiacylglycerol synthase
Probab=40.08 E-value=1e+02 Score=38.44 Aligned_cols=118 Identities=11% Similarity=0.031 Sum_probs=78.7
Q ss_pred cccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcc
Q 003875 517 IQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLL 596 (790)
Q Consensus 517 vq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~l 596 (790)
.++=|++..|.... ++..+. +++. . .....+++.|.- |.- ..+-+++.+.+ +
T Consensus 550 LfVGRLa~EKGld~-LLeAla---~L~~-~-------~pnvrLvIVGDG-P~r---eeLe~la~eLg------------L 601 (794)
T PLN02501 550 YFLGKMVWAKGYRE-LIDLLA---KHKN-E-------LDGFNLDVFGNG-EDA---HEVQRAAKRLD------------L 601 (794)
T ss_pred EEEEcccccCCHHH-HHHHHH---HHHh-h-------CCCeEEEEEcCC-ccH---HHHHHHHHHcC------------C
Confidence 45669999999877 555443 3432 1 112466677743 321 22333333322 2
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 597 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 597 KVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
.|.|+.. ...++.++.++||.-+-|+ .|.=|+.-+-+|.-|++.|+|--|.+..+. +..|+++++.
T Consensus 602 ~V~FLG~--~dd~~~lyasaDVFVlPS~--sEgFGlVlLEAMA~GlPVVATd~pG~e~V~---~g~nGll~~D 667 (794)
T PLN02501 602 NLNFLKG--RDHADDSLHGYKVFINPSI--SDVLCTATAEALAMGKFVVCADHPSNEFFR---SFPNCLTYKT 667 (794)
T ss_pred EEEecCC--CCCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCCEEEecCCCCceEe---ecCCeEecCC
Confidence 5788754 4556678999999999887 699999999999999999999877653322 2478888854
No 81
>PF14474 RTC4: RTC4-like domain
Probab=38.84 E-value=25 Score=34.11 Aligned_cols=32 Identities=28% Similarity=0.553 Sum_probs=26.7
Q ss_pred hhhHHHH-HHHHHHhcCCCHHHHHHHHccceee
Q 003875 194 TLCIPEL-IRILIDLKGLSWKEAWNITQRTVAY 225 (790)
Q Consensus 194 alai~El-mR~Lid~~gl~w~~Aw~it~~~~~f 225 (790)
.+++||+ +|..+++.+++.++|++|.+.|.-|
T Consensus 85 ~VLvPEl~~~LI~EDm~v~~~~A~~il~eS~~~ 117 (124)
T PF14474_consen 85 YVLVPELAVRLIMEDMGVDDEEARQILEESSEY 117 (124)
T ss_pred HHhhHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 4689999 5666788899999999999988655
No 82
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=36.29 E-value=2.5e+02 Score=27.43 Aligned_cols=124 Identities=18% Similarity=0.183 Sum_probs=75.5
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccC-eEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCC
Q 003875 514 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVP-RVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEI 592 (790)
Q Consensus 514 lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P-~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i 592 (790)
.+..++-|+.+.|+..+ ++..+.. +.. ..| ..+++.|..... -..+.+++.... .
T Consensus 200 ~~i~~~g~~~~~k~~~~-~i~~~~~---~~~---------~~~~~~~~~~g~~~~~---~~~~~~~~~~~~----~---- 255 (381)
T COG0438 200 FVVLYVGRLDPEKGLDL-LIEAAAK---LKK---------RGPDIKLVIVGDGPER---REELEKLAKKLG----L---- 255 (381)
T ss_pred eEEEEeeccChhcCHHH-HHHHHHH---hhh---------hcCCeEEEEEcCCCcc---HHHHHHHHHHhC----C----
Confidence 67888888988888777 5544333 322 112 567777777665 111222222221 1
Q ss_pred CCcceEEEecCCC-hhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 593 GDLLKVIFVPDYN-VSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 593 ~~~lKVvFlenY~-vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
.+ +|.|+-.-. -.+.+ ++..||+...-|.- |+-|..-+.++.-|.+.|+|-=|...|+....+ +++++.
T Consensus 256 ~~--~v~~~g~~~~~~~~~-~~~~~~~~v~ps~~--e~~~~~~~Ea~a~g~pvi~~~~~~~~e~~~~~~--~g~~~~ 325 (381)
T COG0438 256 ED--NVKFLGYVPDEELAE-LLASADVFVLPSLS--EGFGLVLLEAMAAGTPVIASDVGGIPEVVEDGE--TGLLVP 325 (381)
T ss_pred CC--cEEEecccCHHHHHH-HHHhCCEEEecccc--ccchHHHHHHHhcCCcEEECCCCChHHHhcCCC--ceEecC
Confidence 11 466633322 23444 67777888877666 888888888889999999997777777665432 444443
No 83
>cd00127 DSPc Dual specificity phosphatases (DSP); Ser/Thr and Tyr protein phosphatases. Structurally similar to tyrosine-specific phosphatases but with a shallower active site cleft and a distinctive active site signature motif, HCxxGxxR. Characterized as VHR- or Cdc25-like.
Probab=31.39 E-value=1e+02 Score=28.53 Aligned_cols=38 Identities=32% Similarity=0.373 Sum_probs=30.4
Q ss_pred CCCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHHccc
Q 003875 181 PEKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 222 (790)
Q Consensus 181 p~~~~ihlNDtH---palai~ElmR~Lid~~gl~w~~Aw~it~~~ 222 (790)
+.++.||.+.|+ +++++..+|+ ..+++.++|++.+++.
T Consensus 81 ~~~vlVHC~~G~~Rs~~~~~~~l~~----~~~~~~~~a~~~vr~~ 121 (139)
T cd00127 81 GGKVLVHCLAGVSRSATLVIAYLMK----TLGLSLREAYEFVKSR 121 (139)
T ss_pred CCcEEEECCCCCchhHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 578899999998 4566666665 4599999999998875
No 84
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=26.47 E-value=5.3e+02 Score=30.62 Aligned_cols=140 Identities=11% Similarity=0.077 Sum_probs=85.6
Q ss_pred HHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCc-HHHHHHH
Q 003875 498 VSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATY-VQAKRIV 576 (790)
Q Consensus 498 ~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y-~~aK~iI 576 (790)
++.++++.| +.-.++.|=|+..-| -+...|.-.+++ |++ .|.-+ .-+++|..|...-++ ..-+++.
T Consensus 275 ~~~lr~~~~-----~~kiIl~VDRLDy~K-GI~~kl~Afe~~--L~~-~Pe~~----gkv~Lvqi~~psr~~v~~y~~l~ 341 (487)
T TIGR02398 275 MERIRSELA-----GVKLILSAERVDYTK-GILEKLNAYERL--LER-RPELL----GKVTLVTACVPAASGMTIYDELQ 341 (487)
T ss_pred HHHHHHHcC-----CceEEEEeccccccc-CHHHHHHHHHHH--HHh-Ccccc----CceEEEEEeCCCcccchHHHHHH
Confidence 344666666 344677888986555 444366665555 233 44432 234566555443222 3336677
Q ss_pred HHHHHHhhhhcCCcCCCCcceEEEecCC-ChhhhhhhccccccccccCCC------cccc--CCCccchhhcccceEeee
Q 003875 577 KFITDVGATVNHDPEIGDLLKVIFVPDY-NVSVAELLIPASELSQHISTA------GMEA--SGTSNMKFAMNGCILIGT 647 (790)
Q Consensus 577 k~I~~va~~vn~Dp~i~~~lKVvFlenY-~vslAe~lipa~Dls~~ista------g~EA--SGTsnMKfamNG~l~lgt 647 (790)
+.|.+++..||..=-.-+.--|+++..+ .-.---.+..+|||-+-+|.+ ++|+ |++ .-.|+|.||-
T Consensus 342 ~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGmNLVa~Eyva~~~-----~~~GvLILSe 416 (487)
T TIGR02398 342 GQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGLNLVAKEYVAAQG-----LLDGVLVLSE 416 (487)
T ss_pred HHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECccccccCcchhhHHhhhc-----CCCCCEEEec
Confidence 8888888888754222223346666654 555555688999999999987 3454 544 2479999999
Q ss_pred cccccchh
Q 003875 648 LDGANVEI 655 (790)
Q Consensus 648 lDGa~vEi 655 (790)
.-|+-.+.
T Consensus 417 faGaa~~l 424 (487)
T TIGR02398 417 FAGAAVEL 424 (487)
T ss_pred cccchhhc
Confidence 99997554
No 85
>smart00195 DSPc Dual specificity phosphatase, catalytic domain.
Probab=26.21 E-value=1.4e+02 Score=27.84 Aligned_cols=40 Identities=25% Similarity=0.318 Sum_probs=31.2
Q ss_pred CCCCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHHccce
Q 003875 180 FPEKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRTV 223 (790)
Q Consensus 180 lp~~~~ihlNDtH---palai~ElmR~Lid~~gl~w~~Aw~it~~~~ 223 (790)
-+.++.+|...|. +++++.-||+ ..|++.++|++.+++.-
T Consensus 77 ~~~~VlVHC~~G~~RS~~v~~~yl~~----~~~~~~~~A~~~v~~~R 119 (138)
T smart00195 77 KGGKVLVHCQAGVSRSATLIIAYLMK----YRNLSLNDAYDFVKDRR 119 (138)
T ss_pred CCCeEEEECCCCCchHHHHHHHHHHH----HhCCCHHHHHHHHHHHC
Confidence 3578999999996 5666666665 56999999999987653
No 86
>PLN02846 digalactosyldiacylglycerol synthase
Probab=25.97 E-value=1.9e+02 Score=33.97 Aligned_cols=119 Identities=14% Similarity=0.066 Sum_probs=79.2
Q ss_pred ecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCc
Q 003875 516 DIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDL 595 (790)
Q Consensus 516 dvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~ 595 (790)
.+++=|+..-|.... ++.. +.+|++..+ ...+++.|.- |.-. ++-+++.+.+
T Consensus 231 ~l~vGRL~~eK~~~~-Li~a---~~~l~~~~~--------~~~l~ivGdG-p~~~---~L~~~a~~l~------------ 282 (462)
T PLN02846 231 AYYIGKMVWSKGYKE-LLKL---LHKHQKELS--------GLEVDLYGSG-EDSD---EVKAAAEKLE------------ 282 (462)
T ss_pred EEEEecCcccCCHHH-HHHH---HHHHHhhCC--------CeEEEEECCC-ccHH---HHHHHHHhcC------------
Confidence 568899999998876 5544 444543111 2346666654 3222 2222222221
Q ss_pred ceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 596 LKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 596 lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
+.+.|+..+ ...+.++.++||..+.|+ .|.-|+.-+-+|.-|.+.|++-.|.+ |+... ..|++++..
T Consensus 283 l~~~vf~G~--~~~~~~~~~~DvFv~pS~--~Et~g~v~lEAmA~G~PVVa~~~~~~-~~v~~--~~ng~~~~~ 349 (462)
T PLN02846 283 LDVRVYPGR--DHADPLFHDYKVFLNPST--TDVVCTTTAEALAMGKIVVCANHPSN-EFFKQ--FPNCRTYDD 349 (462)
T ss_pred CcEEEECCC--CCHHHHHHhCCEEEECCC--cccchHHHHHHHHcCCcEEEecCCCc-ceeec--CCceEecCC
Confidence 123345554 244568899999999997 79999999999999999999988875 76655 489999854
No 87
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=23.61 E-value=4.1e+02 Score=32.59 Aligned_cols=135 Identities=11% Similarity=0.090 Sum_probs=75.1
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeec-CCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003875 512 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGK-AFATYVQAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 512 d~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGK-A~P~y~~aK~iIk~I~~va~~vn~Dp 590 (790)
+..+++.|=|+...|.... +|..+.++. +. .|..+ ..+++|..|- ...+-..-.++-+.+.+.+..||..=
T Consensus 264 ~~~~il~VgRl~~~Kgi~~-~l~A~~~ll--~~-~p~~~----~~v~lv~v~~~sr~~~~~~~~l~~~~~~~v~~in~~~ 335 (726)
T PRK14501 264 GRKIILSIDRLDYTKGIPR-RLLAFERFL--EK-NPEWR----GKVRLVQVAVPSRTGVPQYQEMKREIDELVGRINGEF 335 (726)
T ss_pred CCEEEEEecCcccccCHHH-HHHHHHHHH--Hh-Ccccc----CCEEEEEEecCCCcchHHHHHHHHHHHHHHHHHHhhc
Confidence 4458889999999998777 777766663 22 33321 1345555442 11111222345555555555555321
Q ss_pred CCCCcceEEEecC-CChhhhhhhccccccccccCCCccccCCCccchhhc-----ccceEeeecccccchhc
Q 003875 591 EIGDLLKVIFVPD-YNVSVAELLIPASELSQHISTAGMEASGTSNMKFAM-----NGCILIGTLDGANVEIR 656 (790)
Q Consensus 591 ~i~~~lKVvFlen-Y~vslAe~lipa~Dls~~istag~EASGTsnMKfam-----NG~l~lgtlDGa~vEi~ 656 (790)
..-+...|+|+.. ..-+---.+..+||+-.-+|.+ |.=|-.-+-+|. .|.+.+|+.-|+--|+.
T Consensus 336 ~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~--EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~l~ 405 (726)
T PRK14501 336 GTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLR--DGMNLVAKEYVASRTDGDGVLILSEMAGAAAELA 405 (726)
T ss_pred CCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccc--cccCcccceEEEEcCCCCceEEEecccchhHHhC
Confidence 1112234666654 3444444588999998877653 322222222232 38899999888877654
No 88
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=22.93 E-value=2.2e+02 Score=33.95 Aligned_cols=148 Identities=15% Similarity=0.082 Sum_probs=99.1
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecC--CCCcHHHHHHHHHHHHHhhhh
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKA--FATYVQAKRIVKFITDVGATV 586 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA--~P~y~~aK~iIk~I~~va~~v 586 (790)
+.-.-+|+.-+-||..-|.|.| +|....+...... .++ +.-...+|+|+- -+.+-.-..-++-+.++.+..
T Consensus 269 v~~~d~~~~siN~~~pgkd~~l-~l~a~~~~~~~i~-~~~-----~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~ 341 (495)
T KOG0853|consen 269 VSGIDRFFPSINRFEPGKDQDL-ALPAFTLLHDSIP-EPS-----ISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEY 341 (495)
T ss_pred ecccceEeeeeeecCCCCCcee-ehhhHHhhhcccC-CCC-----CCceEEEEecCCCccccchhhHHHHHHHHHHHHHh
Confidence 4444678888889999999999 8886665554432 211 222345555532 233334444555555555533
Q ss_pred cCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceee
Q 003875 587 NHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFL 666 (790)
Q Consensus 587 n~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~ 666 (790)
+ ..++ .|.|++-- +-++...-++|.-=..+++..|+=|=--.-||-=|.++|+|--|--+||.... .|+|+
T Consensus 342 ~---l~g~--~v~~~~s~--~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~glPvvAt~~GGP~EiV~~~--~tG~l 412 (495)
T KOG0853|consen 342 D---LLGQ--FVWFLPST--TRVAKYRLAADTKGVLYQPANEHFGIVPIEAMACGLPVVATNNGGPAEIVVHG--VTGLL 412 (495)
T ss_pred C---ccCc--eEEEecCC--chHHHHHHHHhcceEEecCCCCCccceeHHHHhcCCCEEEecCCCceEEEEcC--Cccee
Confidence 2 2234 57777763 33333555666666777777799999999999999999999999999998765 89998
Q ss_pred cccchh
Q 003875 667 FGARAH 672 (790)
Q Consensus 667 fG~~~~ 672 (790)
.-...+
T Consensus 413 ~dp~~e 418 (495)
T KOG0853|consen 413 IDPGQE 418 (495)
T ss_pred eCCchH
Confidence 877544
No 89
>PF00782 DSPc: Dual specificity phosphatase, catalytic domain; InterPro: IPR000340 Protein tyrosine (pTyr) phosphorylation is a common post-translational modification which can create novel recognition motifs for protein interactions and cellular localisation, affect protein stability, and regulate enzyme activity. Consequently, maintaining an appropriate level of protein tyrosine phosphorylation is essential for many cellular functions. Tyrosine-specific protein phosphatases (PTPase; 3.1.3.48 from EC) catalyse the removal of a phosphate group attached to a tyrosine residue, using a cysteinyl-phosphate enzyme intermediate. These enzymes are key regulatory components in signal transduction pathways (such as the MAP kinase pathway) and cell cycle control, and are important in the control of cell growth, proliferation, differentiation and transformation [, ]. The PTP superfamily can be divided into four subfamilies []: (1) pTyr-specific phosphatases (2) dual specificity phosphatases (dTyr and dSer/dThr) (3) Cdc25 phosphatases (dTyr and/or dThr) (4) LMW (low molecular weight) phosphatases Based on their cellular localisation, PTPases are also classified as: Receptor-like, which are transmembrane receptors that contain PTPase domains [] Non-receptor (intracellular) PTPases [] All PTPases carry the highly conserved active site motif C(X)5R (PTP signature motif), employ a common catalytic mechanism, and share a similar core structure made of a central parallel beta-sheet with flanking alpha-helices containing a beta-loop-alpha-loop that encompasses the PTP signature motif []. Functional diversity between PTPases is endowed by regulatory domains and subunits. This entry represents dual specificity protein-tyrosine phosphatases. Ser/Thr and Tyr dual specificity phosphatases are a group of enzymes with both Ser/Thr (3.1.3.16 from EC) and tyrosine specific protein phosphatase (3.1.3.48 from EC) activity able to remove both the serine/threonine or tyrosine-bound phosphate group from a wide range of phosphoproteins, including a number of enzymes which have been phosphorylated under the action of a kinase. Dual specificity protein phosphatases (DSPs) regulate mitogenic signal transduction and control the cell cycle. The crystal structure of a human DSP, vaccinia H1-related phosphatase (or VHR), has been determined at 2.1 angstrom resolution []. A shallow active site pocket in VHR allows for the hydrolysis of phosphorylated serine, threonine, or tyrosine protein residues, whereas the deeper active site of protein tyrosine phosphatases (PTPs) restricts substrate specificity to only phosphotyrosine. Positively charged crevices near the active site may explain the enzyme's preference for substrates with two phosphorylated residues. The VHR structure defines a conserved structural scaffold for both DSPs and PTPs. A "recognition region" connecting helix alpha1 to strand beta1, may determine differences in substrate specificity between VHR, the PTPs, and other DSPs. These proteins may also have inactive phosphatase domains, and dependent on the domain composition this loss of catalytic activity has different effects on protein function. Inactive single domain phosphatases can still specifically bind substrates, and protect again dephosphorylation, while the inactive domains of tandem phosphatases can be further subdivided into two classes. Those which bind phosphorylated tyrosine residues may recruit multi-phosphorylated substrates for the adjacent active domains and are more conserved, while the other class have accumulated several variable amino acid substitutions and have a complete loss of tyrosine binding capability. The second class shows a release of evolutionary constraint for the sites around the catalytic centre, which emphasises a difference in function from the first group. There is a region of higher conservation common to both classes, suggesting a new regulatory centre [].; GO: 0008138 protein tyrosine/serine/threonine phosphatase activity, 0006470 protein dephosphorylation; PDB: 2G6Z_A 1MKP_A 1YZ4_A 2P4D_A 1M3G_A 1ZZW_A 2OUD_A 2HXP_A 3LJ8_A 1OHD_A ....
Probab=21.16 E-value=1.4e+02 Score=27.69 Aligned_cols=38 Identities=21% Similarity=0.246 Sum_probs=31.8
Q ss_pred CCCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHHccc
Q 003875 181 PEKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 222 (790)
Q Consensus 181 p~~~~ihlNDtH---palai~ElmR~Lid~~gl~w~~Aw~it~~~ 222 (790)
+.++.||..-|. |++++.-||+ ..|++.++|++.+++.
T Consensus 73 ~~~VlVHC~~G~~RS~~v~~ayLm~----~~~~~~~~A~~~v~~~ 113 (133)
T PF00782_consen 73 GGKVLVHCKAGLSRSGAVAAAYLMK----KNGMSLEEAIEYVRSR 113 (133)
T ss_dssp TSEEEEEESSSSSHHHHHHHHHHHH----HHTSSHHHHHHHHHHH
T ss_pred cceeEEEeCCCcccchHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 356889999999 8888888876 4699999999998765
No 90
>COG4301 Uncharacterized conserved protein [Function unknown]
Probab=20.39 E-value=1.3e+02 Score=33.49 Aligned_cols=65 Identities=22% Similarity=0.385 Sum_probs=45.7
Q ss_pred CCCCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCH----hHHHHHHHHHhhcC--CCCChH
Q 003875 702 GVFGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQ----KRWTRMSIMNTAGS--SKFSSD 771 (790)
Q Consensus 702 g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~----~~W~~~~i~NIA~s--g~FSSD 771 (790)
|.|++.+.......|. .-+..+|+|+++-|. ++.-+++..+|.|+ .++++.|+.++.+. |.|..|
T Consensus 165 GN~tp~e~~~Fl~~l~--~a~~pGd~~LlGvDl---~k~Ae~Le~AYdDp~gVTa~FnlNvLa~lNr~f~~nFD~~ 235 (321)
T COG4301 165 GNLTPGECAVFLTQLR--GALRPGDYFLLGVDL---RKPAERLEAAYDDPQGVTAEFNLNVLAHLNRVFGGNFDVD 235 (321)
T ss_pred cCCChHHHHHHHHHHH--hcCCCcceEEEeccc---cCHHHHHHHhhcCccchHHHHHHHHHHHHHHHhccCCCcc
Confidence 6777766444444443 123448999999997 46677888899995 57888888888764 778655
Done!