Query 003875
Match_columns 790
No_of_seqs 210 out of 1154
Neff 4.1
Searched_HMMs 29240
Date Mon Mar 25 06:54:41 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ygp_A Yeast glycogen phosphor 100.0 1E-225 4E-230 1924.2 42.8 679 1-788 177-879 (879)
2 2gj4_A Glycogen phosphorylase, 100.0 3E-202 9E-207 1735.8 53.8 676 1-790 136-822 (824)
3 1l5w_A Maltodextrin phosphoryl 100.0 8E-202 3E-206 1727.3 47.0 665 1-786 126-796 (796)
4 2c4m_A Glycogen phosphorylase; 100.0 1E-198 4E-203 1701.2 46.2 661 1-790 127-794 (796)
5 3vue_A GBSS-I, granule-bound s 99.4 5.7E-13 1.9E-17 149.0 11.5 275 388-782 230-508 (536)
6 2qzs_A Glycogen synthase; glyc 97.8 0.00027 9.3E-09 75.4 15.8 128 501-658 280-407 (485)
7 1rzu_A Glycogen synthase 1; gl 97.7 0.00064 2.2E-08 72.5 16.9 184 502-780 281-471 (485)
8 3nb0_A Glycogen [starch] synth 97.6 0.00086 3E-08 78.4 16.0 219 389-658 250-559 (725)
9 3fro_A GLGA glycogen synthase; 97.1 0.0069 2.3E-07 62.5 14.2 134 503-668 244-378 (439)
10 2x6q_A Trehalose-synthase TRET 97.0 0.0056 1.9E-07 63.8 12.9 134 509-668 227-364 (416)
11 3s28_A Sucrose synthase 1; gly 96.9 0.0043 1.5E-07 73.6 12.7 145 503-669 562-714 (816)
12 3okp_A GDP-mannose-dependent a 96.8 0.0083 2.8E-07 61.1 11.7 129 509-668 194-327 (394)
13 3oy2_A Glycosyltransferase B73 96.7 0.0093 3.2E-07 62.0 12.0 132 505-658 176-314 (413)
14 3c48_A Predicted glycosyltrans 96.5 0.011 3.8E-07 61.7 11.0 136 509-668 239-374 (438)
15 2f9f_A First mannosyl transfer 96.5 0.0063 2.1E-07 57.0 7.7 136 506-673 16-151 (177)
16 2bfw_A GLGA glycogen synthase; 96.3 0.011 3.7E-07 55.3 8.6 135 502-669 28-164 (200)
17 2jjm_A Glycosyl transferase, g 96.3 0.01 3.5E-07 61.4 9.0 127 509-668 207-333 (394)
18 2r60_A Glycosyl transferase, g 96.3 0.018 6.3E-07 61.8 11.2 136 509-669 258-408 (499)
19 2gek_A Phosphatidylinositol ma 95.2 0.07 2.4E-06 54.7 9.7 124 512-667 207-331 (406)
20 2iw1_A Lipopolysaccharide core 95.0 0.036 1.2E-06 56.2 6.9 128 509-668 192-319 (374)
21 3qhp_A Type 1 capsular polysac 94.5 0.16 5.5E-06 46.0 9.2 111 514-656 3-115 (166)
22 2iuy_A Avigt4, glycosyltransfe 93.5 0.14 4.8E-06 51.8 7.5 130 512-674 161-298 (342)
23 2vsy_A XCC0866; transferase, g 88.6 3.9 0.00014 44.4 13.2 104 515-647 378-482 (568)
24 1uqt_A Alpha, alpha-trehalose- 81.8 8.8 0.0003 42.6 11.9 141 512-668 254-402 (482)
25 3beo_A UDP-N-acetylglucosamine 81.4 4.2 0.00014 41.2 8.5 125 511-672 204-330 (375)
26 1vgv_A UDP-N-acetylglucosamine 80.6 14 0.00048 37.5 12.1 65 597-671 264-329 (384)
27 2x0d_A WSAF; GT4 family, trans 53.1 41 0.0014 36.0 9.0 123 512-669 240-363 (413)
28 3t5t_A Putative glycosyltransf 49.8 57 0.0019 36.8 9.8 137 512-668 280-421 (496)
29 1f0k_A MURG, UDP-N-acetylgluco 47.1 45 0.0015 33.5 7.8 102 510-650 180-283 (364)
30 2hy7_A Glucuronosyltransferase 35.1 1.2E+02 0.0041 32.0 9.1 105 514-668 223-335 (406)
31 3emu_A Leucine rich repeat and 28.5 60 0.0021 30.2 4.8 37 182-222 88-127 (161)
32 3s4e_A Dual specificity protei 26.7 69 0.0023 28.9 4.7 38 181-222 81-121 (144)
33 3ezz_A Dual specificity protei 22.8 99 0.0034 27.7 5.0 38 181-222 81-121 (144)
34 3d4u_A Tafia, carboxypeptidase 21.4 2.9E+02 0.0099 28.4 8.8 68 556-624 58-147 (309)
No 1
>1ygp_A Yeast glycogen phosphorylase; phosphorylated form, glycosyltransferase; HET: PLP; 2.80A {Saccharomyces cerevisiae} SCOP: c.87.1.4
Probab=100.00 E-value=1.2e-225 Score=1924.25 Aligned_cols=679 Identities=48% Similarity=0.849 Sum_probs=648.2
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEee--CC-CCCe--eeecCce
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVP--GS-DGKS--HWIGGED 75 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~--~~-~G~~--~w~~~~~ 75 (790)
|||||+|++||||||+||||+|+|.||||+|.||+||..|||||++|++.+|+|+|+|+++. +. +|+. .|+|++.
T Consensus 177 ~AtLglP~~GyGlrY~~G~F~Q~i~dG~Q~E~pd~Wl~~g~pwe~~r~~~~~~V~f~G~v~~~~~~~~G~~~~~w~~~~~ 256 (879)
T 1ygp_A 177 MATEGIPAWGYGLRYEYGIFAQKIIDGYQVETPDYWLNSGNPWEIERNEVQIPVTFYGYVDRPEGGKTTLSASQWIGGER 256 (879)
T ss_dssp HHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCTTTTCCTTCEEEEEEEEEEEESCEEECC----CTTSCCEEECSEE
T ss_pred HHhCCCCeEEEEeeecCCceEEEeeCCeeEEeccchhccCCcccccCCCceEEEeeCCEEeeccccCCCcceeEeeCCcE
Confidence 68999999999999999999999999999999999999999999999999999999999983 34 6865 4999999
Q ss_pred EEEEEEeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhh
Q 003875 76 IKAVAYDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTL 155 (790)
Q Consensus 76 v~A~~yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl 155 (790)
|+|+|||+|||||+|+++|+||||+++++ ..|||..||.|||.+|+++++.+|+||++|||+|++++||+|||||||||
T Consensus 257 v~av~yD~Pi~Gy~~~~~n~lRLW~a~~~-~~f~l~~fn~gdy~~a~~~~~~~e~IT~vLYp~D~~~~GkeLRLkQEyfl 335 (879)
T 1ygp_A 257 VLAVAYDFPVPGFKTSNVNNLRLWQARPT-TEFDLNKFNNGDYKNSVAQQQRAESITAVLYPNDNFAQGKELRLKQQYFW 335 (879)
T ss_dssp EEEEEEEEEEECSSCCCEEEEEEEEEEES-CSCCHHHHHTTCHHHHTHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHH
T ss_pred EEEEEccccccCcCCCceEEEEEEEeccC-cccchhhccCccHhHhhhChHhhhchhccCCCCCCCccchhhheehhhhh
Confidence 99999999999999999999999999955 48999999999999999999999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCccc
Q 003875 156 CSASLQDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEAL 235 (790)
Q Consensus 156 ~saslqdiirrf~~~~gG~~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpeal 235 (790)
||||+|||||+|++.+| +|+.||++++|||||||||||||||||+|+|++|++|++||+||+++|+|||||||||||
T Consensus 336 ~sa~lqdilr~~~~~~~---~l~~l~~~~~ihlNDtHpalai~ELmR~L~d~~gl~wd~Aw~iv~~t~~yTnHT~lpeal 412 (879)
T 1ygp_A 336 CAASLHDILRRFKKSKR---PWTEFPDQVAIQLNDTHPTLAIVELQRVLVDLEKLDWHEAWDIVTKTFAYTNHTVMQEAL 412 (879)
T ss_dssp HHHHHHHHHHHHHHHTC---CGGGHHHHEEEEEESSTTTHHHHHHHHHHHHTTCCCHHHHHHHHHHHEEEEECCCSGGGS
T ss_pred hhhHHHHHHHHHHHhCC---ChhhcCCceEEEccCCcHHHHHHHHHHHHhhhcCCCHHHHHHHHHHheeeecCcCchHhh
Confidence 99999999999999873 799999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCccc
Q 003875 236 EKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDEL 315 (790)
Q Consensus 236 Ekw~~~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (790)
|+||++||+++||||++||++||.+|+..++.+||+ +.+++.+|+||+
T Consensus 413 E~wpv~l~~~lLpr~~~II~ein~~f~~~~~~~~~~-----d~~~~~~l~ii~--------------------------- 460 (879)
T 1ygp_A 413 EKWPRRLFGHLLPRHLEIIYDINWFFLEDVAKKFPK-----DVDLLSRISIIE--------------------------- 460 (879)
T ss_dssp CEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTT-----CTHHHHHHCSEE---------------------------
T ss_pred ccCCHHHHHHHCCcHHHHHHHHHHHHHHHHHHHcCC-----CHHHHHhcceec---------------------------
Confidence 999999999999999999999999999999999998 899999999987
Q ss_pred ccccCCCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeee
Q 003875 316 ENCDEEGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANL 395 (790)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~L 395 (790)
+ .+++++||||+|
T Consensus 461 -----------------------------------------------------------------~--~~~~~~v~MA~L 473 (879)
T 1ygp_A 461 -----------------------------------------------------------------E--NSPERQIRMAFL 473 (879)
T ss_dssp -----------------------------------------------------------------C--CSSSCEEEHHHH
T ss_pred -----------------------------------------------------------------c--CCCcceeehHHH
Confidence 1 012368999999
Q ss_pred eeccCcchHHHHHHHHHHHhhhhhhhhhhhcCC-CCcccccccCccccccccChhHHHHHHHhcCC--CccccCcchHHH
Q 003875 396 CVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPE-KFQNKTNGVTPRRWIRFCNPDLSSILTSWLGT--EDWVTNTGKLAE 472 (790)
Q Consensus 396 al~~S~~vNGVS~lHsei~k~~~f~~f~~l~P~-kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~--~~W~~~~~~l~~ 472 (790)
||++||+|||||+|||+|+|+++|++|+++||+ ||+|||||||+|||+.+|||+|++||+++||+ ++|.+++++|++
T Consensus 474 Ai~~S~~vNGVs~LH~ev~k~~~f~df~~l~P~~kf~n~TNGVt~rrWl~~~Np~L~~Li~~~iG~~~~~W~~d~~~L~~ 553 (879)
T 1ygp_A 474 AIVGSHKVNGVVELHSELIKTTIFKDFIKFYGPSKFVNVTNGITPRRWLKQANPSLAKLISETLNDPTEEYLLDMAKLTQ 553 (879)
T ss_dssp HHHHEEEEEESSHHHHHHHHHTTTHHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHTTCTTCGGGTCGGGGGG
T ss_pred HHHhcCceeEehHHHHHHHHHHHhHHHHHhCCCCcccCcCCCcCCchhhhhcCHHHHHHHHHhcCCChhhhhhCHHHHHH
Confidence 999999999999999999999999999999999 99999999999999999999999999999993 499999999999
Q ss_pred hhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHc-CCcCC-----CCcceecccccccccccccchhhhHHHHHHHHHhcC
Q 003875 473 LRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKT-GYSVS-----PDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMS 546 (790)
Q Consensus 473 l~~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~-g~~l~-----pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~ 546 (790)
|+++++|++|+++|+++|++||.+|++||++++ |+.|| |++|||||||||||||||+||+|++++||.+||+ +
T Consensus 554 l~~~~~D~~f~~~l~~iK~~nK~~La~~i~~~~~g~~ld~~~~~p~sLfdvq~KR~heYKRq~LniL~ii~ry~~Ik~-~ 632 (879)
T 1ygp_A 554 LEKYVEDKEFLKKWNQVKLNNKIRLVDLIKKENDGVDIINREYLDDTLFDMQVKRIHEYKRQQLNVFGIIYRYLAMKN-M 632 (879)
T ss_dssp GGGGGGCTHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSCSTTGGGCEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-H
T ss_pred HHhhCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCcEecCCCCCCCeeeeeeeehhhHhHHHHHHHHHHHHHHHHHHh-C
Confidence 999999999999999999999999999999999 99999 9999999999999999999999999999999998 5
Q ss_pred ------hhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhcccccccc
Q 003875 547 ------AVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQ 620 (790)
Q Consensus 547 ------~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~ 620 (790)
|....++++||||||||||||+|.+||.|||+|++||++|||||+++++||||||||||||+||+||||||||+
T Consensus 633 ~~~~~~p~~~~~~~~P~~~IFaGKAaP~y~~aK~iIklI~~va~~iN~Dp~v~~~LKVVFlenY~VslAe~iipaaDvse 712 (879)
T 1ygp_A 633 LKNGASIEEVARKYPRKVSIFGGKSAPGYYMAKLIIKLINCVADIVNNDESIEHLLKVVFVADYNVSKAEIIIPASDLSE 712 (879)
T ss_dssp HHTTCCHHHHHHHSCCEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCGGGTTSEEEEEETTCCHHHHHHHGGGCSEEE
T ss_pred ccccCCCcccccCCCCeEEEEeccCCCCcHHHHHHHHHHHHHHHHhccChhhCCceEEEEeCCCCHHHHHHhhhhhhhhh
Confidence 54222447899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecccchhhhhhhhhhcCCCCCCCChhHHHHHHHHh
Q 003875 621 HISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVK 700 (790)
Q Consensus 621 ~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~~i~ 700 (790)
||||||+||||||||||||||+|||||||||||||+++||+||+|+||++++||..++.+++...|..+|.+++|+|+|.
T Consensus 713 qistag~EASGTsnMKfalNGaLtlgtlDGanvEi~e~vG~eN~fiFG~~~~ev~~~~~~~~~~~y~~~~~l~~v~d~i~ 792 (879)
T 1ygp_A 713 HISTAGTEASGTSNMKFVMNGGLIIGTVDGANVEITREIGEDNVFLFGNLSENVEELRYNHQYHPQDLPSSLDSVLSYIE 792 (879)
T ss_dssp ECCCTTCCSCCHHHHHHHTTTCEEEEESCTHHHHHHHHHCGGGSEEESCCHHHHHHHHHHHHHSCCCCCHHHHHHHHHTC
T ss_pred hCCCCCccccCchhhHHHHcCCeeeecccchhHHHHHHcCcccEEEccCCHHHHHHHHHhCchhccCCCHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999887777889999999999999
Q ss_pred cCCCCCc---cHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHh-HHHHHHHHHhhcCCCCChHHHHHH
Q 003875 701 SGVFGSY---NYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQK-RWTRMSIMNTAGSSKFSSDRTIQE 776 (790)
Q Consensus 701 ~g~f~~~---~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~-~W~~~~i~NIA~sg~FSSDRtI~E 776 (790)
+|.|++. +|++||++|+.+ +|+|||++||+||++||++|++.|.|++ +|++|||.|||+||+|||||||+|
T Consensus 793 ~g~f~~~~~~~f~~l~~~L~~~-----~D~y~vl~Df~sY~~~q~~v~~~Y~d~~~~W~~~~i~NiA~~G~FSSDRtI~e 867 (879)
T 1ygp_A 793 SGQFSPENPNEFKPLVDSIKYH-----GDYYLVSDDFESYLATHELVDQEFHNQRSEWLKKSVLSLANVGFFSSDRCIEE 867 (879)
T ss_dssp --CCCTTSTTTTHHHHHHHHHS-----TTTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHGGGBHHHHHHH
T ss_pred cCCCCCCChHHHHHHHHHHhcC-----CCeEEEeccHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHhcCccCchHHHHH
Confidence 9999864 499999999865 7999999999999999999999999999 999999999999999999999999
Q ss_pred HHHHhhcccccC
Q 003875 777 YARDIWNIIPVE 788 (790)
Q Consensus 777 Ya~~IW~i~p~~ 788 (790)
||++||+++|++
T Consensus 868 Ya~~IW~~~p~~ 879 (879)
T 1ygp_A 868 YSDTIWNVEPVT 879 (879)
T ss_dssp HHHHTTCCCCC-
T ss_pred HHHHhhCCCCCC
Confidence 999999999964
No 2
>2gj4_A Glycogen phosphorylase, muscle form; transferase; HET: PLR 2TH; 1.60A {Oryctolagus cuniculus} SCOP: c.87.1.4 PDB: 2gm9_A* 1abb_A* 3nc4_A* 3l79_A* 2pyd_A* 2pyi_A* 3l7a_A* 3l7b_A* 3l7c_A* 3l7d_A* 2qnb_A* 1c8l_A* 1axr_A* 1gpy_A* 1e1y_A* 1lwo_A* 1pyg_A* 1uzu_A* 1lwn_A* 1xkx_A* ...
Probab=100.00 E-value=2.7e-202 Score=1735.81 Aligned_cols=676 Identities=45% Similarity=0.840 Sum_probs=634.3
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCCCCeeeecCceEEEEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVA 80 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~ 80 (790)
|||||+|++||||||+||||+|+|+||||+|.||+||..|||||++|++.+++|+|+|+++.+.+|. +|++++.|+|+|
T Consensus 136 ~AtL~~P~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~Wl~~~~pwe~~r~~~~~~V~f~g~v~~~~~g~-~w~~~~~v~av~ 214 (824)
T 2gj4_A 136 MATLGLAAYGYGIRYEFGIFNQKICGGWQMEEADDWLRYGNPWEKARPEFTLPVHFYGRVEHTSQGA-KWVDTQVVLAMP 214 (824)
T ss_dssp HHHTTCCEEEEEECCSBCSCEEEEETTEEEEECCCTTTTCCTTCEECGGGCEEEEESCEEEECSSSE-EEESCEEEEEEE
T ss_pred HHhCCCCeEEEeecccCCCeeEEeeCCEEEEcCccccccCCcccccCCCceEEEEeCCEEEecCCCc-eecccceEEEee
Confidence 6899999999999999999999999999999999999999999999999999999999998767783 799999999999
Q ss_pred EeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhhchH
Q 003875 81 YDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASL 160 (790)
Q Consensus 81 yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~sasl 160 (790)
||+|||||+|++||+||||+++ ++++|||..||.|+|..|+.++..+++||++|||+|++++||+|||||||||||||+
T Consensus 215 yD~pi~Gy~~~~vn~lRlW~a~-~~~~f~~~~fn~G~~~~a~~d~~~~enIt~~LYp~D~~~~Gk~lRL~Qeyf~~sa~l 293 (824)
T 2gj4_A 215 YDTPVPGYRNNVVNTMRLWSAK-APNDFNLKDFNVGGYIQAVLDRNLAENISRVLYPNDNFFEGKELRLKQEYFVVAATL 293 (824)
T ss_dssp EEEEEECSSSSCEEEEEEEEEE-CCC----------CHHHHHHTHHHHHGGGSBCCCCSSCCCCCHHHHHHHHHHHHHHH
T ss_pred ccCCcCCCCCCceEEEEEEEee-cCcccchhhccCccHHHHHhcccchhhcCcCCCCCCCccchHhHhhhhhhhhhhhHH
Confidence 9999999999999999999999 778999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcc-----cccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCccc
Q 003875 161 QDIIARFEKRSGAN-----VNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEAL 235 (790)
Q Consensus 161 qdiirrf~~~~gG~-----~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpeal 235 (790)
|||||+|++.+.|. .+|+.||++++||||||||||++|||||+|+|++|++|++||++|+++|+||||||+|||+
T Consensus 294 qdilr~~~~~~~g~~~~~~~~~~~~~~p~viHlNDtHpal~i~ElmR~l~d~~~l~~d~A~~i~~~~~vfT~HTl~~egl 373 (824)
T 2gj4_A 294 QDIIRRFKSSKFGCRDPVRTNFDAFPDKVAIQLNDTHPSLAIPELMRVLVDLERLDWDKAWEVTVKTCAYTNHTVLPEAL 373 (824)
T ss_dssp HHHHHHHHC-----------CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHTSCCCHHHHHHHHHHHEEEECCCCCGGGS
T ss_pred HHHHHHHHHhccccccccccchhhcCCCcEEEccCCchHhHHHHHHHHHHHhcCCCHHHHHHHhcCcEEEEeCCChHHHh
Confidence 99999999875332 3799999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCCHHHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCccc
Q 003875 236 EKWSFELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDEL 315 (790)
Q Consensus 236 Ekw~~~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (790)
|+||++||+++||||++||++||++|+..+..++|+ +.+++.++++++
T Consensus 374 E~wp~~l~~~lLPr~~~ii~~in~~f~~~~~~~~~~-----~~~~~~~~~~i~--------------------------- 421 (824)
T 2gj4_A 374 ERWPVHLLETLLPRHLQIIYEINQRFLNRVAAAFPG-----DVDRLRRMSLVE--------------------------- 421 (824)
T ss_dssp CEEEHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSTT-----CHHHHHHHCSEE---------------------------
T ss_pred hhchHHHHHHhCchHHHHHHHHHHHHHHHHHHHcCC-----cHHHHHhhhhhh---------------------------
Confidence 999999999999999999999999999999999998 788898999877
Q ss_pred ccccCCCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeee
Q 003875 316 ENCDEEGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANL 395 (790)
Q Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~L 395 (790)
+ +..+.||||+|
T Consensus 422 -----------------------------------------------------------------~---~~~~~vnMa~l 433 (824)
T 2gj4_A 422 -----------------------------------------------------------------E---GAVKRINMAHL 433 (824)
T ss_dssp -----------------------------------------------------------------C---SSSCEEEHHHH
T ss_pred -----------------------------------------------------------------h---cCCCcccHHHH
Confidence 2 23468999999
Q ss_pred eeccCcchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhh
Q 003875 396 CVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRK 475 (790)
Q Consensus 396 al~~S~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~ 475 (790)
||++||+|||||++|++++|+.+|++|+++||++|+|||||||+|||+.+|||+++++|++.||+ +|.+++++|++|.+
T Consensus 434 ai~~S~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~lI~~~ig~-~W~~~~~~l~~L~~ 512 (824)
T 2gj4_A 434 CIAGSHAVNGVARIHSEILKKTIFKDFYELEPHKFQNKTNGITPRRWLVLCNPGLAEIIAERIGE-EYISDLDQLRKLLS 512 (824)
T ss_dssp HHHTCSCEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCCTCHHHHHHHHHHHCS-GGGGCGGGGGGGGG
T ss_pred HHHhcCceeeEcHHHHHHHhhHHhHHHHHcChhhcccccCCcChhhhcccCCHhHHHHHHHhcCc-hhhhCHHHHHHHHh
Confidence 99999999999999999999999999999999999999999999999999999999999999996 99999999999999
Q ss_pred cCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhcccc
Q 003875 476 FADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFV 555 (790)
Q Consensus 476 ~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~ 555 (790)
+.+|++|+++|+++|++||.+|+++|++++|..+||+++||+|||||||||||+||+|++++||.+|++ +|.. .++
T Consensus 513 y~~d~~~~~~~~~~K~~nK~~la~~l~~~~Gl~vdpd~l~~g~vkRl~eYKRq~L~~l~~i~~~~~i~~-~~~~---~~~ 588 (824)
T 2gj4_A 513 YVDDEAFIRDVAKVKQENKLKFAAYLEREYKVHINPNSLFDVQVKRIHEYKRQLLNCLHVITLYNRIKK-EPNK---FVV 588 (824)
T ss_dssp GTTCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHH-CTTS---CCC
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcchhhHHHHHHHHHHHHHh-CCCC---CCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999998 6653 377
Q ss_pred CeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccc
Q 003875 556 PRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNM 635 (790)
Q Consensus 556 P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnM 635 (790)
|+||||||||||+|++||.|||+|+++|+++||||+++++|||||+|||||++|++|+||||||+||||||+||||||||
T Consensus 589 p~q~If~GKA~P~y~~aK~iIkli~~va~~in~Dp~v~~~lKVvFl~nYdvslA~~I~~gaDv~l~~S~ag~EAsGTs~M 668 (824)
T 2gj4_A 589 PRTVMIGGKAAPGYHMAKMIIKLITAIGDVVNHDPVVGDRLRVIFLENYRVSLAEKVIPAADLSEQISTAGTEASGTGNM 668 (824)
T ss_dssp CEEEEEECCCCTTCHHHHHHHHHHHHHHHHHTTCTTTGGGEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCSHHH
T ss_pred CEEEEEEEeCCHhHHHHHHHHHHHHHHHHHhccCcccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccceEeeecccccchhcccccCcceeecccchhhhhhhhhhcCCC---CCCCChhHHHHHHHHhcCCCCCc---cH
Q 003875 636 KFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEG---KFVPDARFEEVKKFVKSGVFGSY---NY 709 (790)
Q Consensus 636 KfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~~~~---~~~~~~~~~~v~~~i~~g~f~~~---~~ 709 (790)
||||||+|||||||||||||.++||++|+|+||..++++..++..+ +. .|..++.++++++.+.+|.|+.. .|
T Consensus 669 KamlNGaLtigtlDGanvEi~e~vG~~Ngf~FG~~~~ev~~l~~~~-~~a~~~Y~~~~~l~~v~d~i~~g~fs~~~~~~y 747 (824)
T 2gj4_A 669 KFMLNGALTIGTMDGANVEMAEEAGEENFFIFGMRVEDVDRLDQRG-YNAQEYYDRIPELRQIIEQLSSGFFSPKQPDLF 747 (824)
T ss_dssp HHHHTTCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTCTTSTTTT
T ss_pred HHHHcCceEEEEecCccchhhhccCCCCEEEeCCcHHHHHHHHHcC-CCHHHHhcCCHHHHHHHHHHHhCCCCCCChHHH
Confidence 9999999999999999999999999999999999999998886654 33 26678999999999999999854 49
Q ss_pred HHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhcccccCC
Q 003875 710 DELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVEL 789 (790)
Q Consensus 710 ~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i~p~~~ 789 (790)
.+||++|.. +|+|||++||+||++||++|+.+|.|+++|++||+.|||.+|+|||||||+|||++||+++|++.
T Consensus 748 ~~ly~~l~~------~D~~~~~~Df~~y~~~q~~v~~~y~d~~~W~~~~~~nia~~g~FssdRtI~eY~~~iw~~~~~~~ 821 (824)
T 2gj4_A 748 KDIVNMLMH------HDRFKVFADYEEYVKCQERVSALYKNPREWTRMVIRNIATSGKFSSDRTIAQYAREIWGVEPSRQ 821 (824)
T ss_dssp HHHHHHHHH------CCTTCTGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHTTCGGGBHHHHHHHHHHHTTCCCCCCC
T ss_pred HHHHHHHHc------CChhhhhhhHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHhCCcCcHHHHHHHHHHHhCCCCCCC
Confidence 999999985 59999999999999999999999999999999999999999999999999999999999999876
Q ss_pred C
Q 003875 790 P 790 (790)
Q Consensus 790 p 790 (790)
|
T Consensus 822 ~ 822 (824)
T 2gj4_A 822 R 822 (824)
T ss_dssp C
T ss_pred C
Confidence 5
No 3
>1l5w_A Maltodextrin phosphorylase; enzymatic catalysis, substrate complex, trans; HET: GLC PLP; 1.80A {Escherichia coli} SCOP: c.87.1.4 PDB: 1l5v_A* 1l6i_A* 2asv_A* 2av6_A* 2aw3_A* 2azd_A* 1qm5_A* 1e4o_A* 2ecp_A* 1ahp_A*
Probab=100.00 E-value=8e-202 Score=1727.26 Aligned_cols=665 Identities=44% Similarity=0.781 Sum_probs=639.3
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCCCCeeeecCceEEEEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVA 80 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~ 80 (790)
|||||+|++||||||+||||+|+|.||||+|.||+|+..|+|||++|++.+|+|+|+|+++. + + +|++++.|+|+|
T Consensus 126 ~a~l~~p~~G~Gi~Y~~G~F~Q~i~dG~Q~E~~d~wl~~~~pwe~~r~~~~~~V~f~g~~~~--~-~-~w~~~~~v~av~ 201 (796)
T 1l5w_A 126 MATVGQSATGYGLNYQYGLFRQSFVDGKQVEAPDDWHRSNYPWFRHNEALDVQVGIGGKVTK--D-G-RWEPEFTITGQA 201 (796)
T ss_dssp HHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCCCGGGCTTCEECGGGCEEEEESCEECT--T-S-CEECSEEEEEEE
T ss_pred HHhCCCCeEEEeeeecCCceeEEecCCeeEEecCccccCCCcceeecCCcEEEEeeCCEEee--c-c-eecCCceEEEEE
Confidence 68999999999999999999999999999999999999999999999999999999999984 2 4 699999999999
Q ss_pred EeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhhchH
Q 003875 81 YDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASL 160 (790)
Q Consensus 81 yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~sasl 160 (790)
||+|||||+|+++|+||||+++++. .|||..||.|||.+|+++++.+|+||++|||+|++++||+||||||||||+||+
T Consensus 202 yd~pi~Gy~~~~~n~lrlW~a~~~~-~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~l 280 (796)
T 1l5w_A 202 WDLPVVGYRNGVAQPLRLWQATHAH-PFDLTKFNDGDFLRAEQQGINAEKLTKVLYPNDNAFEGKKLRLMQQYFQCACSV 280 (796)
T ss_dssp EEEEEECSSSCCEEEEEEEEEECSS-CCCHHHHHTTCTTGGGHHHHHHHGGGTCSSCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ecccccCCCCCceEEEEEEEeccCc-ccChhhcCCccHhhhhhchHhHhhhhhcCcCCCCccchHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999655 799999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCCH
Q 003875 161 QDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSF 240 (790)
Q Consensus 161 qdiirrf~~~~gG~~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpealEkw~~ 240 (790)
|||+|+|+++++ +|+.||++++||||||||||++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||+
T Consensus 281 q~ilr~~~~~~~---~~~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~ 357 (796)
T 1l5w_A 281 ADILRRHHLAGR---KLHELADYEVIQLNDTHPTIAIPELLRVLIDEHQMSWDDAWAITSKTFAYTNHTLMPEALERWDV 357 (796)
T ss_dssp HHHHHHHHHTTC---CGGGHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHTTTEEEECCCCSGGGSCEEEH
T ss_pred HHHHHHHHHcCC---ChhhcCCccEEEecCCccHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCCcHhhhhcCCH
Confidence 999999999873 78889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccC
Q 003875 241 ELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDE 320 (790)
Q Consensus 241 ~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (790)
+||+++||||++||++||.+|++++..++|+ +.+++.+++++.
T Consensus 358 ~l~~~~lpr~~~ii~~I~~~f~~~~~~~~~~-----~~~~~~~~~i~~-------------------------------- 400 (796)
T 1l5w_A 358 KLVKGLLPRHMQIINEINTRFKTLVEKTWPG-----DEKVWAKLAVVH-------------------------------- 400 (796)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHSTT-----CHHHHHHHCSEE--------------------------------
T ss_pred HHHHHHhHHHHHHHhccCHHHHHHHHHhcCC-----cHHHHhhhhccc--------------------------------
Confidence 9999999999999999999999999999998 899999999865
Q ss_pred CCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccC
Q 003875 321 EGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGS 400 (790)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~S 400 (790)
+ +.||||+|||++|
T Consensus 401 ------------------------------------------------------------~------~~vnMa~lai~~S 414 (796)
T 1l5w_A 401 ------------------------------------------------------------D------KQVHMANLCVVGG 414 (796)
T ss_dssp ------------------------------------------------------------T------TEEEHHHHHHHHS
T ss_pred ------------------------------------------------------------C------CcccHHHHHHHhc
Confidence 2 4799999999999
Q ss_pred cchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhhcCCCH
Q 003875 401 HAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNE 480 (790)
Q Consensus 401 ~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~~d~ 480 (790)
|+|||||++|++++|+.+|++|+++||+||+|||||||+|||+.+|||++++||++++|+ +|++|++.|++|.++++|+
T Consensus 415 ~~VNgVS~lH~e~ik~~~f~~~~~~~p~k~~~iTNGI~~rrWl~~~NP~l~~li~~~~g~-~w~~d~~~l~~l~~~~~d~ 493 (796)
T 1l5w_A 415 FAVNGVAALHSDLVVKDLFPEYHQLWPNKFHNVTNGITPRRWIKQCNPALAALLDKSLQK-EWANDLDQLINLEKFADDA 493 (796)
T ss_dssp SEEEESSHHHHHHHHHTTSHHHHHHCGGGEEECCCCBCHHHHTTTTCHHHHHHHHHHCSS-CCTTCGGGGGGGGGGGGCH
T ss_pred CccccccHHHHHHHHhHHhhHHHHhCccccCCCcCCCcHHHhhcccCHhHHHHHHHhcCc-ccccCHHHHHHHHhcCCCH
Confidence 999999999999999999999999999999999999999999999999999999999996 9999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEE
Q 003875 481 DLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCI 560 (790)
Q Consensus 481 ~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~I 560 (790)
+|+++|+++|++||.+|++||++++|..+||+++||+|||||||||||+||+|++++||.+||+ +|... ++|+|||
T Consensus 494 ~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRl~eYKRq~Lnil~ii~~~~~i~~-~~~~~---~~p~q~I 569 (796)
T 1l5w_A 494 KFRQQYREIKQANKVRLAEFVKVRTGIEINPQAIFDIQIKRLHEYKRQHLNLLHILALYKEIRE-NPQAD---RVPRVFL 569 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEESCCCGGGTHHHHHHHHHHHHHHHHT-CTTCC---CCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCCcceEeeeecchhhcccCEeHHHHHHHHHHHhc-CCCCC---CCCeEEE
Confidence 9999988999999999999999999999999999999999999999999999999999999998 76643 6899999
Q ss_pred EeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcc
Q 003875 561 FGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMN 640 (790)
Q Consensus 561 FaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamN 640 (790)
|||||||+|++||.|||+|+++|++|||||+++++|||||+|||||++|++|+||||||+||||||+|||||||||||||
T Consensus 570 f~GKA~P~y~~aK~iIk~i~~va~~in~Dp~~~~~lKVvfl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N 649 (796)
T 1l5w_A 570 FGAKAAPGYYLAKNIIFAINKVADVINNDPLVGDKLKVVFLPDYCVSAAEKLIPAADISEQISTAGKEASGTGNMKLALN 649 (796)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTGGGEEEEECSSCCHHHHHHHGGGCSEEEECCCTTTCCCCSHHHHHHHT
T ss_pred EEecCChhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEeeecccccchhcccccCcceeecccchhhhhhhhhhcCCC---CCCCChhHHHHHHHHhcCCCCCc---cHHHHHH
Q 003875 641 GCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEG---KFVPDARFEEVKKFVKSGVFGSY---NYDELMG 714 (790)
Q Consensus 641 G~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~~~~---~~~~~~~~~~v~~~i~~g~f~~~---~~~~l~~ 714 (790)
|+|+|||||||||||.+++|++|+|+||.+++||..++..+ +. .|..+|.++++++.+.+|.|+.. +|.+||+
T Consensus 650 GaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~~-y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~ 728 (796)
T 1l5w_A 650 GALTVGTLDGANVEIAEKVGEENIFIFGHTVEQVKAILAKG-YDPVKWRKKDKVLDAVLKELESGKYSDGDKHAFDQMLH 728 (796)
T ss_dssp TCEEEECSCTTHHHHHHHHCGGGSEECSCCHHHHHHHHHHC-CCHHHHHHHCHHHHHHHHHHHHTTTTTTCTTTTHHHHH
T ss_pred CCeeecCcCCeeeehhhccCCCcEEEecCCHHHHHHHHHcc-cCHHHHhhcCHHHHHHHHHHHcCCCCCCcHHHHHHHHH
Confidence 99999999999999999999999999999999999999875 33 25678899999999999999764 4999999
Q ss_pred HhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhcccc
Q 003875 715 SLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIP 786 (790)
Q Consensus 715 ~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i~p 786 (790)
+|+++ ++|+|+|++||+||++||++|+.+|.|+++|++||+.|||+||+|||||||+|||++||+++|
T Consensus 729 ~L~~~----~~D~~~v~~Df~~y~~~q~~v~~~Y~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~P 796 (796)
T 1l5w_A 729 SIGKQ----GGDPYLVMADFAAYVEAQKQVDVLYRDQEAWTRAAILNTARCGMFSSDRSIRDYQARIWQAKR 796 (796)
T ss_dssp HTSTT----TCCTTCHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHCGGGBHHHHHHHHHHHTTTSCC
T ss_pred HHhcc----CCCceeehhhHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCCCC
Confidence 99841 159999999999999999999999999999999999999999999999999999999999987
No 4
>2c4m_A Glycogen phosphorylase; allosteric control, phosphate dependence, starch degrading, transferase, glycosyltransferase; HET: PLP; 1.9A {Corynebacterium callunae}
Probab=100.00 E-value=1.1e-198 Score=1701.18 Aligned_cols=661 Identities=43% Similarity=0.735 Sum_probs=630.1
Q ss_pred CCCCCCCceEEeeCCCCcceEEEEeCCeeeeeccccccCCCCcccccCCceeeeeeCCeEeeCCCCCeeeecCceEEEEE
Q 003875 1 MATLNYPAWGYGLRYKYGLFKQRITKDGQEEVAEDWLELGNPWEIERNDVSYPVKFYGKIVPGSDGKSHWIGGEDIKAVA 80 (790)
Q Consensus 1 ~AtL~~P~~GyGlrY~yG~FkQ~I~dG~Q~E~pd~Wl~~gnpwei~r~~~~~~V~f~G~~~~~~~G~~~w~~~~~v~A~~ 80 (790)
|||||+|++||||||+||||+|+|.||||+|.||+|+..|+|||++|++.+|+|+|+|+ .|.|+|
T Consensus 127 ~a~l~~p~~G~Gl~Y~~G~F~Q~i~dG~Q~E~~d~wl~~g~pwe~~r~~~~~~V~f~g~---------------~v~a~~ 191 (796)
T 2c4m_A 127 AVTQDYPVTGYGLLYRFGLFRQSFNEGFQVEKPDPWREEEYPFTIRRASDQLVVCFDDM---------------KTRAIP 191 (796)
T ss_dssp HHHTTCCEEEEEECCSSCSCEEEEETTEEEEECCCSSSSCCTTSEECGGGCEEEEETTE---------------EEEEEE
T ss_pred HHhCCCCeEEEeecccCCCeEEEeeCCEEEeeCCccccCCCceeEecCCcEEEEEeCCE---------------EEEEEE
Confidence 68999999999999999999999999999999999999999999999999999999985 367899
Q ss_pred EeecCCCCCCCCeEEEEEEEeccCCCcccccccCCCchhhHHHHhhhcccccceecCCCCccccccchhhhhhhhhhchH
Q 003875 81 YDIPIPGYKTKTTINLRLWSTMVPSEDFDLSAFNAGDHTKAAEALTNAEKICYILYPGDESVEGKVLRLKQQYTLCSASL 160 (790)
Q Consensus 81 yd~pi~Gy~~~~~~~LRLW~a~v~~~~fdl~~fn~gdy~~a~e~~~~~e~It~vLYp~D~~~~GkelRLkQeyfl~sasl 160 (790)
||+|||||+|+++|+||||+++ +...|||..||.|||.+|+++++.+|+||++|||+|++++||+||||||||||+||+
T Consensus 192 yd~pi~gy~~~~~n~lrlW~a~-~~~~f~l~~fn~gdy~~a~~~~~~~~~It~~LYp~D~~~~Gk~lRL~Qe~ff~~a~l 270 (796)
T 2c4m_A 192 YDMPITGYGTHNVGTLRLWKAE-PWEEFDYDAFNAQRFTDAIIERERVSDICRVLYPNDTTYEGKKLRVRQQYFFTSASL 270 (796)
T ss_dssp EEEEECCTTCCCCEEEEEEEEE-ESSSSCHHHHHTTCHHHHHHHHHHHHHHHHSSSCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred EeccccCcCCCceEEEEEEecc-cccccchhhccCcchhhhhhchHhhhchhhcCcCCCCCcchHHHHHHhHHHHHHHHH
Confidence 9999999999999999999999 445899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCcccccccCCCCceEEeCCCChhhhHHHHHHHHHHhcCCCHHHHHHHHccceeecccCCCCcccccCCH
Q 003875 161 QDIIARFEKRSGANVNWEEFPEKVAVQMNDTHPTLCIPELIRILIDLKGLSWKEAWNITQRTVAYTNHTVLPEALEKWSF 240 (790)
Q Consensus 161 qdiirrf~~~~gG~~~l~~lp~~~~ihlNDtHpalai~ElmR~Lid~~gl~w~~Aw~it~~~~~fTnHT~vpealEkw~~ 240 (790)
|||+|+|++.+| +|+.||++++||||||||||++|||||+|+|++|++|++||+||+++|+||||||+|||+|+||+
T Consensus 271 q~ilr~~~~~~~---~l~~l~~p~viHlNDtHpal~i~ElmR~l~d~~~~~~d~A~~i~~~~~vyT~HTl~~egle~wp~ 347 (796)
T 2c4m_A 271 QAMIQDHLAHHK---DLSNFAEFHSVQLNDTHPVLAIPELMRLLMDEHDMGWEESWAIVSKTFAYTNHTVLTEALEQWDE 347 (796)
T ss_dssp HHHHHHHHHHSS---CSTTHHHHEEEEEESSTTTTHHHHHHHHHHHHSCCCHHHHHHHHHHHEEEECCCSSSTTSCEEEH
T ss_pred HHHHHHHHHhCC---ChhhcCCCeEEEeCCChHHhHHHHHHHHHhhhcCCCHHHHHHHhhccEEEEecCchHHHhhhCCH
Confidence 999999999874 68889999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhchhHHHHHHHHhHHHHHHHHHhhCCCCchhhHHHHhhhccccccCCchhhhhhhcccccCCCCCCCcccccccC
Q 003875 241 ELMQKLLPRHMEIIEMIDEELVHTIVSEYGTADPDLLEKRLKETRILENVDLPATFADLFVKTKESTDVVPDDELENCDE 320 (790)
Q Consensus 241 ~l~~~lLprh~~II~~In~~f~~~i~~~~~~~~~~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (790)
+||+++||||++||++||.+|+..+..+ |+ +++++.+++++.
T Consensus 348 ~l~~~~lpr~~~ii~~I~~~~~~~~~~~-~~-----~~~~~~~~~i~~-------------------------------- 389 (796)
T 2c4m_A 348 QIFQQLFWRVWEIIAEIDRRFRLERAAD-GL-----DEETINRMAPIQ-------------------------------- 389 (796)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHT-TC-----CHHHHHHHCSEE--------------------------------
T ss_pred HHHHHHhHHHHHHHcCcCHHHHHHHHhc-CC-----cHhhhhccccee--------------------------------
Confidence 9999999999999999999999999999 98 899999999865
Q ss_pred CCCCChhhhhhhhcccccccccCCCCCCcccccccCCCCCCccchhhhhhhhhHHHHHhhhhcCCCCCeeeeeeeeeccC
Q 003875 321 EGGPVDEELESAQEDGVLEEESTDVVPDDELENCDEEGGPVDEELESEQEDDVLEEEKEAEAVQEPPQLVRMANLCVVGS 400 (790)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~v~Ma~Lal~~S 400 (790)
+ +.||||+|||++|
T Consensus 390 ------------------------------------------------------------~------~~vnMa~lai~~S 403 (796)
T 2c4m_A 390 ------------------------------------------------------------H------GTVHMAWIACYAA 403 (796)
T ss_dssp ------------------------------------------------------------T------TEEEHHHHHHHHC
T ss_pred ------------------------------------------------------------C------CcccHHHHHHHhc
Confidence 2 4799999999999
Q ss_pred cchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcchHHHhhhcCCCH
Q 003875 401 HAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTGKLAELRKFADNE 480 (790)
Q Consensus 401 ~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~~l~~l~~~~~d~ 480 (790)
|+|||||++|++++|+.+|++|+++||+||+|||||||+|||+.+|||++++||++++|+++|.+|+++|++|.++++|+
T Consensus 404 ~~VNgVS~lHae~ik~~~f~~~~~~~p~kf~~iTNGI~~rrWl~~~NP~l~~li~~~~g~~~w~~d~~~l~~l~~~~~d~ 483 (796)
T 2c4m_A 404 YSINGVAALHTEIIKAETLADWYALWPEKFNNKTNGVTPRRWLRMINPGLSDLLTRLSGSDDWVTDLDELKKLRSYADDK 483 (796)
T ss_dssp SEEEESSHHHHHHHHHTTTHHHHHHCGGGEEECCCCBCTCCCCCTTCHHHHHHHHHHHSSSGGGGCGGGGGGGGGGGGCH
T ss_pred CceeeccHHHHHHhhhhhhhhHHHcCccccccccCCcchHHhhcccCHhHHHHHHHhcCchhhhhChHHHHHHHhhCCCH
Confidence 99999999999999999999999999999999999999999999999999999999999448999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEE
Q 003875 481 DLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCI 560 (790)
Q Consensus 481 ~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~I 560 (790)
+|+++|+++|++||.+|++||++++|..+||+++||+|||||||||||+||+|++++||.+||+ +|... ++|+|||
T Consensus 484 ~~~~~l~~~K~~nK~~L~~~l~~~~Gl~vdpd~l~~~~vkRlheYKRq~Lnil~ii~~~~~i~~-~~~~~---~~p~q~I 559 (796)
T 2c4m_A 484 SVLEELRAIKAANKQDFAEWILERQGIEIDPESIFDVQIKRLHEYKRQLMNALYVLDLYFRIKE-DGLTD---IPARTVI 559 (796)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCTTSEEEEEECCCCGGGTHHHHHHHHHHHHHHHHT-SCCCS---SCCEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeecchhhcccCEeHHHHHHHHHHHhh-CCCCC---CCCeEEE
Confidence 9999999999999999999999999999999999999999999999999999999999999997 66533 6899999
Q ss_pred EeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcc
Q 003875 561 FGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMN 640 (790)
Q Consensus 561 FaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamN 640 (790)
|||||||+|++||.|||+|+++|++|||||+++++|||||+|||||++|++|+||||||+||||||+|||||||||||||
T Consensus 560 f~GKA~P~y~~aK~iIk~i~~va~~in~dp~~~~~lKVvFl~nY~vslA~~I~~gaDv~l~~S~a~~EAsGTs~MKam~N 639 (796)
T 2c4m_A 560 FGAKAAPGYVRAKAIIKLINSIADLVNNDPEVSPLLKVVFVENYNVSPAEHILPASDVSEQISTAGKEASGTSNMKFMMN 639 (796)
T ss_dssp EECCCCTTCHHHHHHHHHHHHHHHHHHTCTTTTTTEEEEEETTCCHHHHHHHGGGCSEEEECCCTTSCSCCHHHHHHHHT
T ss_pred EEecCCHhHHHHHHHHHHHHHHHHHhccccccCCceEEEEECCCCHHHHHHHhhhcceeecCCCCCCCCCchHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEeeecccccchhcccccCcceeecccchhhhhhhhhhcCCCC---CCCChhHHHHHHHHhcCCCCCc---cHHHHHH
Q 003875 641 GCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGK---FVPDARFEEVKKFVKSGVFGSY---NYDELMG 714 (790)
Q Consensus 641 G~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~~~~~---~~~~~~~~~v~~~i~~g~f~~~---~~~~l~~ 714 (790)
|+|+|||||||||||.+++|++|+|+||.+++++..++.. +.. |..+|.++++++.+.+|.|+.. +|.+||+
T Consensus 640 GaL~iGtLDGanvEi~e~vG~~NgF~FG~~~~ev~~l~~~--y~a~~~y~~~~~~~~vvd~~~~g~fs~~~~~~y~~Ly~ 717 (796)
T 2c4m_A 640 GALTLGTMDGANVEIVDSVGEENAYIFGARVEELPALRES--YKPYELYETVPGLKRALDALDNGTLNDNNSGLFYDLKH 717 (796)
T ss_dssp TCEEEEESSTHHHHHHHHHCGGGSEEESCCTTTHHHHHHT--CCHHHHHHHSTTHHHHHHTTTSSSSCCTTCCHHHHHHH
T ss_pred CCeEEeccCCeEeehhhhcCCCcEEEecCchhhHHHHHHh--hChHHHhhcCHHHHHHHHHHHcCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999887 443 5567899999999999999864 3999999
Q ss_pred HhccCCCCCCCcccccccChhHHHHHHHHHHHHh-cCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhhcccccCCC
Q 003875 715 SLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAY-CDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIWNIIPVELP 790 (790)
Q Consensus 715 ~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y-~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW~i~p~~~p 790 (790)
+|..+.+.+++|+|||++||+||++||++|++.| .|+++|++||+.|||+||+|||||||+|||++||+++|++.|
T Consensus 718 ~L~~~~~~~~~D~~~~~~Df~~y~~~q~~v~~~y~~d~~~W~~~~i~nia~~g~FssdRti~eY~~~iw~~~~~~~~ 794 (796)
T 2c4m_A 718 SLIHGYGKDASDTYYVLGDFADYRETRDRMAADYASDPLGWARMAWINICESGRFSSDRTIRDYATEIWKLEPTPAV 794 (796)
T ss_dssp HHHSCCGGGCSCTTCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHGGGGBHHHHHHHHHHHTTCCCCCCC-
T ss_pred HHHhcccCCCCCcchhhhhHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHhcCccCchHHHHHHHHHHhCCCCCCcC
Confidence 9974211122699999999999999999999988 999999999999999999999999999999999999998754
No 5
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=99.40 E-value=5.7e-13 Score=148.99 Aligned_cols=275 Identities=14% Similarity=0.164 Sum_probs=191.3
Q ss_pred CeeeeeeeeeccCcchHHHHHHHHHHHhhhhhhhhh----hhcCCCCcccccccCccccccccChhHHHHHHHhcCCCcc
Q 003875 388 QLVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFY----KLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDW 463 (790)
Q Consensus 388 ~~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~f~~f~----~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W 463 (790)
+.+||-..++..|.+|+.||.-+.+-+.+. |.... .+-+.++.-|.|||....|- |.-.. .+..
T Consensus 230 ~~~n~~k~~i~~ad~v~tVS~~~a~ei~~~-~~~g~~l~~~~~~~~i~~I~NGiD~~~~~----p~~d~----~~~~--- 297 (536)
T 3vue_A 230 RKINWMKAGILEADRVLTVSPYYAEELISG-IARGCELDNIMRLTGITGIVNGMDVSEWD----PSKDK----YITA--- 297 (536)
T ss_dssp EEEEHHHHHHHHCSEEEESCHHHHHHHHTT-CCCCSSSCCCSCCCSCEECCCCCCTTTSC----TTTCS----SSSC---
T ss_pred cchhHHHHHHHhccEEEEcCHHHhhhhhcc-cccccccccccccCCeEEEECCcchhhcC----CCCcc----cccc---
Confidence 578999999999999999998776633222 11000 11245788999999999994 54211 1110
Q ss_pred ccCcchHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHH
Q 003875 464 VTNTGKLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMK 543 (790)
Q Consensus 464 ~~~~~~l~~l~~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik 543 (790)
.+.... ..+.|..+|..| +++.|...|++..+.++|-|+.++|...+ ++..+.+ |+
T Consensus 298 -----------~~~~~~-----~~~~K~~~k~~l----~~~~gl~~d~~~p~i~~vgRl~~~Kg~~~-li~a~~~---l~ 353 (536)
T 3vue_A 298 -----------KYDATT-----AIEAKALNKEAL----QAEAGLPVDRKIPLIAFIGRLEEQKGPDV-MAAAIPE---LM 353 (536)
T ss_dssp -----------CCCTTT-----HHHHHHHHHHHH----HHHTTSCCCTTSCEEEEECCBSGGGCHHH-HHHHHHH---HT
T ss_pred -----------ccchhh-----hhhhhHHHHHHH----HHhcCCCCCCCCcEEEEEeeccccCChHH-HHHHHHH---hH
Confidence 011111 225677777665 45679999999999999999999999998 7776554 43
Q ss_pred hcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccC
Q 003875 544 EMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHIS 623 (790)
Q Consensus 544 ~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~is 623 (790)
+ . ..++++.|...+.+. ..++ ..+... .+ +|.|+..|+......+..+||+...-|
T Consensus 354 ~-~---------~~~l~l~G~G~~~~~---~~~~---~~~~~~------~~--~v~~~~~~~~~~~~~~~~~aD~~v~PS 409 (536)
T 3vue_A 354 Q-E---------DVQIVLLGTGKKKFE---KLLK---SMEEKY------PG--KVRAVVKFNAPLAHLIMAGADVLAVPS 409 (536)
T ss_dssp T-S---------SCEEEEECCBCHHHH---HHHH---HHHHHS------TT--TEEEECSCCHHHHHHHHHHCSEEEECC
T ss_pred h-h---------CCeEEEEeccCchHH---HHHH---HHHhhc------CC--ceEEEEeccHHHHHHHHHhhheeeccc
Confidence 2 0 235777775443322 2222 222211 12 799999999999999999999999888
Q ss_pred CCccccCCCccchhhcccceEeeecccccchhcccccCcceeecccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCC
Q 003875 624 TAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGV 703 (790)
Q Consensus 624 tag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~~i~~g~ 703 (790)
+ .|.+|.+-|-+|..|++.|+|--|...|+.++. +|+|+|+.... .+ -.
T Consensus 410 ~--~E~fgl~~lEAma~G~PvI~s~~gG~~e~V~dg--~~G~~~~~~~~-----------~g----------------~l 458 (536)
T 3vue_A 410 R--FEPCGLIQLQGMRYGTPCACASTGGLVDTVIEG--KTGFHMGRLSV-----------DC----------------KV 458 (536)
T ss_dssp S--CCSSCSHHHHHHHTTCCEEECSCTHHHHHCCBT--TTEEECCCCCS-----------CT----------------TC
T ss_pred c--cCCCCHHHHHHHHcCCCEEEcCCCCchheeeCC--CCccccccCCC-----------ce----------------eE
Confidence 7 599999999999999999999999999987654 89999876311 01 03
Q ss_pred CCCccHHHHHHHhccCCCCCCCcccccccChhHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHHhh
Q 003875 704 FGSYNYDELMGSLEGNEGFGQADYFLVGKDFPSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARDIW 782 (790)
Q Consensus 704 f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~IW 782 (790)
|.+.|.+.|.+.|. ++...|.+ ..|.+++...++. .||=+++.++|.+ +|
T Consensus 459 ~~~~d~~~la~ai~-------------------------ral~~~~~-~~~~~~~~~am~~--~fSW~~~A~~y~~-ly 508 (536)
T 3vue_A 459 VEPSDVKKVAATLK-------------------------RAIKVVGT-PAYEEMVRNCMNQ--DLSWKGPAKNWEN-VL 508 (536)
T ss_dssp CCHHHHHHHHHHHH-------------------------HHHHHTTS-HHHHHHHHHHHHS--CCSSHHHHHHHHH-HH
T ss_pred ECCCCHHHHHHHHH-------------------------HHHHhcCc-HHHHHHHHHHHHh--cCCHHHHHHHHHH-HH
Confidence 34455667766664 45556754 5698887766653 6999999999965 44
No 6
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=97.83 E-value=0.00027 Score=75.42 Aligned_cols=128 Identities=13% Similarity=0.104 Sum_probs=91.3
Q ss_pred HHHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHH
Q 003875 501 IKEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 580 (790)
Q Consensus 501 I~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~ 580 (790)
++++.|..-+++....+++=|+..+|...+ ++..+.+ +++ . +.++++.|...+ .....+-+++.
T Consensus 280 ~r~~~~~~~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~---l~~-~---------~~~l~ivG~g~~--~~~~~l~~~~~ 343 (485)
T 2qzs_A 280 LQIAMGLKVDDKVPLFAVVSRLTSQKGLDL-VLEALPG---LLE-Q---------GGQLALLGAGDP--VLQEGFLAAAA 343 (485)
T ss_dssp HHHHHTCCCCTTSCEEEEEEEESGGGCHHH-HHHHHHH---HHH-T---------TCEEEEEEEECH--HHHHHHHHHHH
T ss_pred HHHHcCCCCCCCCeEEEEeccCccccCHHH-HHHHHHH---Hhh-C---------CcEEEEEeCCch--HHHHHHHHHHH
Confidence 345567554457889999999999999887 6665544 332 1 346778886422 12233434443
Q ss_pred HHhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhccc
Q 003875 581 DVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 658 (790)
Q Consensus 581 ~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~ 658 (790)
+.+ + +|+|+..|.-.....++.+||+....|+ .|..|.+-+-+|.-|++.|+|-.|...|+.+.
T Consensus 344 ~~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~g~~~lEAma~G~PvI~s~~gg~~e~v~~ 407 (485)
T 2qzs_A 344 EYP----------G--QVGVQIGYHEAFSHRIMGGADVILVPSR--FEPCGLTQLYGLKYGTLPLVRRTGGLADTVSD 407 (485)
T ss_dssp HST----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCB
T ss_pred hCC----------C--cEEEeCCCCHHHHHHHHHhCCEEEECCc--cCCCcHHHHHHHHCCCCEEECCCCCccceecc
Confidence 321 2 6877777766666788999999998877 69999999999999999999988887777644
No 7
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=97.74 E-value=0.00064 Score=72.54 Aligned_cols=184 Identities=16% Similarity=0.141 Sum_probs=122.7
Q ss_pred HHHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHH
Q 003875 502 KEKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITD 581 (790)
Q Consensus 502 ~~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~ 581 (790)
+++.|..-++ ....+++=|+..+|...+ ++..+.++ ++ . ..++++.|...+ .....+-+++.+
T Consensus 281 r~~~~~~~~~-~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~-~---------~~~l~ivG~g~~--~~~~~l~~~~~~ 343 (485)
T 1rzu_A 281 AEHFRIDDDG-SPLFCVISRLTWQKGIDL-MAEAVDEI---VS-L---------GGRLVVLGAGDV--ALEGALLAAASR 343 (485)
T ss_dssp HHHHTCCCSS-SCEEEEESCBSTTTTHHH-HHTTHHHH---HH-T---------TCEEEEEECBCH--HHHHHHHHHHHH
T ss_pred HHhcCCCCCC-CeEEEEEccCccccCHHH-HHHHHHHH---Hh-c---------CceEEEEeCCch--HHHHHHHHHHHh
Confidence 4455644322 348889999999999888 77665544 32 0 347888887422 122334444433
Q ss_pred HhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccc--
Q 003875 582 VGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV-- 659 (790)
Q Consensus 582 va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~-- 659 (790)
.. + +|+|+..|.-.....++.+||+....|. .|..|.+-+-+|.-|++.|+|-.|...|+.+..
T Consensus 344 ~~----------~--~v~~~~g~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~gg~~e~v~~~~~ 409 (485)
T 1rzu_A 344 HH----------G--RVGVAIGYNEPLSHLMQAGCDAIIIPSR--FEPCGLTQLYALRYGCIPVVARTGGLADTVIDANH 409 (485)
T ss_dssp TT----------T--TEEEEESCCHHHHHHHHHHCSEEEECCS--CCSSCSHHHHHHHHTCEEEEESSHHHHHHCCBCCH
T ss_pred CC----------C--cEEEecCCCHHHHHHHHhcCCEEEECcc--cCCCCHHHHHHHHCCCCEEEeCCCChhheeccccc
Confidence 21 2 6887777876666789999999998877 699999999999999999999888887776432
Q ss_pred -----cCcceeecccchhhhhhhhhhcCCCCCCCChhHHHHHHHHhcCCCCCccHHHHHHHhccCCCCCCCcccccccCh
Q 003875 660 -----GEENFFLFGARAHEIAGLRKERSEGKFVPDARFEEVKKFVKSGVFGSYNYDELMGSLEGNEGFGQADYFLVGKDF 734 (790)
Q Consensus 660 -----g~en~~~fG~~~~ev~~l~~~~~~~~~~~~~~~~~v~~~i~~g~f~~~~~~~l~~~L~~~~~~~~~D~~~v~~Df 734 (790)
+.+|+++|.. .|.++|.+.|.
T Consensus 410 ~~~~~~~~~G~l~~~-------------------------------------~d~~~la~~i~----------------- 435 (485)
T 1rzu_A 410 AALASKAATGVQFSP-------------------------------------VTLDGLKQAIR----------------- 435 (485)
T ss_dssp HHHHTTCCCBEEESS-------------------------------------CSHHHHHHHHH-----------------
T ss_pred ccccccCCcceEeCC-------------------------------------CCHHHHHHHHH-----------------
Confidence 1145555532 12333433333
Q ss_pred hHHHHHHHHHHHHhcCHhHHHHHHHHHhhcCCCCChHHHHHHHHHH
Q 003875 735 PSYLECQEKVDEAYCDQKRWTRMSIMNTAGSSKFSSDRTIQEYARD 780 (790)
Q Consensus 735 ~sY~~aq~~V~~~Y~d~~~W~~~~i~NIA~sg~FSSDRtI~EYa~~ 780 (790)
.+...|.|+..|.++.....+ -.||.+++.++|.+-
T Consensus 436 --------~ll~~~~~~~~~~~~~~~~~~--~~fs~~~~~~~~~~~ 471 (485)
T 1rzu_A 436 --------RTVRYYHDPKLWTQMQKLGMK--SDVSWEKSAGLYAAL 471 (485)
T ss_dssp --------HHHHHHTCHHHHHHHHHHHHT--CCCBHHHHHHHHHHH
T ss_pred --------HHHHHhCCHHHHHHHHHHHHH--HhCChHHHHHHHHHH
Confidence 333445788888877766543 689999999988653
No 8
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=97.58 E-value=0.00086 Score=78.39 Aligned_cols=219 Identities=16% Similarity=0.160 Sum_probs=141.7
Q ss_pred eeeeeeeeeccCcchHHHHHHHHHHHhhhhhhhhhhhcCCCCcccccccCccccccccChhHHHHHHHhcCCCccccCcc
Q 003875 389 LVRMANLCVVGSHAVNGVAEIHSEIVTNEVFNEFYKLWPEKFQNKTNGVTPRRWIRFCNPDLSSILTSWLGTEDWVTNTG 468 (790)
Q Consensus 389 ~v~Ma~Lal~~S~~vNGVS~lHsei~k~~~f~~f~~l~P~kf~niTNGVt~rrWl~~~Np~L~~Li~~~iG~~~W~~~~~ 468 (790)
.++|-..+++.|..|+.||....+=++. +..--|.++ |-|||....|- |.
T Consensus 250 ~~~~EKaga~~AD~ITTVS~~yA~Ei~~-----Ll~r~~d~i--IpNGID~~~f~----p~------------------- 299 (725)
T 3nb0_A 250 RYCIERAAAHSADVFTTVSQITAFEAEH-----LLKRKPDGI--LPNGLNVIKFQ----AF------------------- 299 (725)
T ss_dssp HHHHHHHHHHHSSEEEESSHHHHHHHHH-----HTSSCCSEE--CCCCBCCCCCS----ST-------------------
T ss_pred HHHHHHHHHHhCCEEEECCHHHHHHHHH-----HhcCCCCEE--EcCCccccccC----cc-------------------
Confidence 4566667788999999998777664443 223334445 99999988883 42
Q ss_pred hHHHhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcC--CcCCCC-cceeccccccc-ccccccchhhhHHHHHHHHHh
Q 003875 469 KLAELRKFADNEDLQSQFRAAKRNNKMKVVSFIKEKTG--YSVSPD-AMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKE 544 (790)
Q Consensus 469 ~l~~l~~~~~d~~f~~~~~~vK~~nK~~L~~~I~~~~g--~~l~pd-~lfdvq~kR~h-eYKRq~Lnil~ii~ry~~ik~ 544 (790)
.+ +++.|..+|.+|.++++.+.+ ..++++ .++..-+-|+. +-|=-.| ++..+.|+.+...
T Consensus 300 -----------~~----~~~~k~~aK~klq~~l~~~~~~~l~l~~dk~liifivgRle~~nKGiDl-~ieAl~~L~~~l~ 363 (725)
T 3nb0_A 300 -----------HE----FQNLHALKKEKINDFVRGHFHGCFDFDLDNTLYFFIAGRYEYKNKGADM-FIEALARLNYRLK 363 (725)
T ss_dssp -----------TH----HHHHHHHHHHHHHHHHHHHTTTCCCSCGGGEEEEEEESSCCTTTTTHHH-HHHHHHHHHHHHH
T ss_pred -----------hh----hHHHHHHHHHHHHHHHHhhcccCCCCCCCceeEEEEEEEeccccCCHHH-HHHHHHHHHHHHh
Confidence 12 457889999999999988764 577744 56666689998 6688888 8888888887643
Q ss_pred cChhhhhccccCeEEEEeecCCCC----------------------cHHHHHHHHHHH----------------------
Q 003875 545 MSAVERKAKFVPRVCIFGGKAFAT----------------------YVQAKRIVKFIT---------------------- 580 (790)
Q Consensus 545 ~~~~~r~~~~~P~~~IFaGKA~P~----------------------y~~aK~iIk~I~---------------------- 580 (790)
.+...+ .+=..+|+.++..-- -.+||++.....
T Consensus 364 ~~~~~~---~vvafii~p~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~l~~~ 440 (725)
T 3nb0_A 364 VSGSKK---TVVAFIVMPAKNNSFTVEALKGQAEVRALENTVHEVTTSIGKRIFDHAIRYPHNGLTTELPTDLGELLKSS 440 (725)
T ss_dssp HTTCCC---EEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCSSSCCCHHHHCCHH
T ss_pred hccCCC---cEEEEEEeCCCCCCCchhhhcchhHHHHHHHHHHHHHHHHhHHHHHHHhcccccccCCCCCCCHHHhcChH
Confidence 121111 111123444432211 112333332211
Q ss_pred ----------HHhh--------------------------hhcCCcCCCCcceEEEecCCChhh-------hhhhccccc
Q 003875 581 ----------DVGA--------------------------TVNHDPEIGDLLKVIFVPDYNVSV-------AELLIPASE 617 (790)
Q Consensus 581 ----------~va~--------------------------~vn~Dp~i~~~lKVvFlenY~vsl-------Ae~lipa~D 617 (790)
+..+ .++=...-.+++||||+|.|-=+. -+.++.+||
T Consensus 441 ~~~~lkr~~~~~~~~~~~lpp~~TH~~~~~~~D~Il~~~r~l~L~N~~~drVKVIf~P~~L~~~d~lf~~d~~~~~~~ad 520 (725)
T 3nb0_A 441 DKVMLKRRILALRRPEGQLPPIVTHNMVDDANDLILNKIRQVQLFNSPSDRVKMIFHPEFLNANNPILGLDYDEFVRGCH 520 (725)
T ss_dssp HHHHHHHHHHHHCCCTTCCCCSBSEEETTGGGCHHHHHHHHHTCCCCTTCSEEEEECCSCCCTTCSSSCCCHHHHHHHCS
T ss_pred HHHHHHHHHHhhccCCCCCCCeeeeecccCCccHHHHHHHhcCCCCCcCCceeEEEeccccCCCCccchhHHHHHHhhce
Confidence 0000 010011224889999999986553 356789999
Q ss_pred cccccCCCccccCCCccchhhcccceEeeecccccchhccc
Q 003875 618 LSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQE 658 (790)
Q Consensus 618 ls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~ 658 (790)
+...-|. .|..|-.-|-+|.-|++.|.|-=|---|...+
T Consensus 521 vfV~PS~--~EgfGl~~LEAmA~G~PvI~s~~gG~~d~V~d 559 (725)
T 3nb0_A 521 LGVFPSY--YEPWGYTPAECTVMGVPSITTNVSGFGSYMED 559 (725)
T ss_dssp EEECCCS--SBSSCHHHHHHHHTTCCEEEETTBHHHHHHHT
T ss_pred EEEeccc--cCCCCHHHHHHHHcCCCEEEeCCCChhhhhhc
Confidence 9999886 69999999999999999999977765554433
No 9
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.06 E-value=0.0069 Score=62.52 Aligned_cols=134 Identities=16% Similarity=0.083 Sum_probs=92.2
Q ss_pred HHcCCcCCCCcceeccccccc-ccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHH
Q 003875 503 EKTGYSVSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITD 581 (790)
Q Consensus 503 ~~~g~~l~pd~lfdvq~kR~h-eYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~ 581 (790)
++.| ++++ ...+++=|+. .+|...+ ++..+.+ +++ ... ..+..+++.|...+. ....+-+++.+
T Consensus 244 ~~~~--~~~~-~~i~~~G~~~~~~Kg~~~-li~a~~~---l~~-~~~-----~~~~~l~i~G~g~~~--~~~~l~~~~~~ 308 (439)
T 3fro_A 244 SKFG--MDEG-VTFMFIGRFDRGQKGVDV-LLKAIEI---LSS-KKE-----FQEMRFIIIGKGDPE--LEGWARSLEEK 308 (439)
T ss_dssp HHHT--CCSC-EEEEEECCSSCTTBCHHH-HHHHHHH---HHT-SGG-----GGGEEEEEECCCCHH--HHHHHHHHHHH
T ss_pred HHcC--CCCC-cEEEEEcccccccccHHH-HHHHHHH---HHh-ccc-----CCCeEEEEEcCCChh--HHHHHHHHHhh
Confidence 3445 4666 8999999999 9999887 6665554 432 110 125688899965422 12333333332
Q ss_pred HhhhhcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccC
Q 003875 582 VGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGE 661 (790)
Q Consensus 582 va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~ 661 (790)
.. + .|+|..-+.-+-...++.+||+....|.. |..|.+-+-+|.-|++.|+|-.|..-|+.+.
T Consensus 309 ~~----------~--~~~~~g~~~~~~~~~~~~~adv~v~ps~~--e~~~~~~~EAma~G~Pvi~s~~~~~~e~~~~--- 371 (439)
T 3fro_A 309 HG----------N--VKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDIITN--- 371 (439)
T ss_dssp CT----------T--EEEECSCCCHHHHHHHHTTCSEEEECBSC--CSSCHHHHHHHHTTCEEEEESSTHHHHHCCT---
T ss_pred cC----------C--EEEEcCCCCHHHHHHHHHHCCEEEeCCCC--CCccHHHHHHHHCCCCeEEcCCCCcceeEEc---
Confidence 22 1 35555546777777888999999988874 9999999999999999999988887776642
Q ss_pred cceeecc
Q 003875 662 ENFFLFG 668 (790)
Q Consensus 662 en~~~fG 668 (790)
.+++++.
T Consensus 372 ~~g~~~~ 378 (439)
T 3fro_A 372 ETGILVK 378 (439)
T ss_dssp TTCEEEC
T ss_pred CceEEeC
Confidence 3777764
No 10
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.00 E-value=0.0056 Score=63.84 Aligned_cols=134 Identities=19% Similarity=0.137 Sum_probs=92.4
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHH-HHHHHHHHHHhhhhc
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQA-KRIVKFITDVGATVN 587 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~a-K~iIk~I~~va~~vn 587 (790)
++++....+++=|+..+|...+ ++..+.++ ++.. ....+++.|.....+... ..+-+++...+
T Consensus 227 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l---~~~~--------~~~~l~i~G~g~~~~~~~~~~l~~~~~~~~---- 290 (416)
T 2x6q_A 227 VDPEKPIITQVSRFDPWKGIFD-VIEIYRKV---KEKI--------PGVQLLLVGVMAHDDPEGWIYFEKTLRKIG---- 290 (416)
T ss_dssp CCTTSCEEEEECCCCTTSCHHH-HHHHHHHH---HHHC--------TTCEEEEEECCCTTCHHHHHHHHHHHHHHT----
T ss_pred CCCCCcEEEEEeccccccCHHH-HHHHHHHH---HHhC--------CCeEEEEEecCcccchhHHHHHHHHHHHhC----
Confidence 5677888999999999999887 66655443 3211 135788888765433222 23333433332
Q ss_pred CCcCCCCcceEEEec---CCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcce
Q 003875 588 HDPEIGDLLKVIFVP---DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENF 664 (790)
Q Consensus 588 ~Dp~i~~~lKVvFle---nY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~ 664 (790)
+.+ +|.|+. +++-.-...++.+||+-...|. .|..|++-+-+|.-|++.|+|--|...|+.+.. +++
T Consensus 291 ----~~~--~V~~~G~~~~~~~~~~~~~~~~ad~~v~ps~--~E~~~~~~lEAma~G~PvI~~~~~g~~e~i~~~--~~g 360 (416)
T 2x6q_A 291 ----EDY--DVKVLTNLIGVHAREVNAFQRASDVILQMSI--REGFGLTVTEAMWKGKPVIGRAVGGIKFQIVDG--ETG 360 (416)
T ss_dssp ----TCT--TEEEEEGGGTCCHHHHHHHHHHCSEEEECCS--SCSSCHHHHHHHHTTCCEEEESCHHHHHHCCBT--TTE
T ss_pred ----CCC--cEEEecccCCCCHHHHHHHHHhCCEEEECCC--cCCCccHHHHHHHcCCCEEEccCCCChhheecC--CCe
Confidence 123 588865 4444455678899999988777 499999999999999999999878777776543 577
Q ss_pred eecc
Q 003875 665 FLFG 668 (790)
Q Consensus 665 ~~fG 668 (790)
+++.
T Consensus 361 ~l~~ 364 (416)
T 2x6q_A 361 FLVR 364 (416)
T ss_dssp EEES
T ss_pred EEEC
Confidence 7775
No 11
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=96.93 E-value=0.0043 Score=73.58 Aligned_cols=145 Identities=12% Similarity=0.059 Sum_probs=100.5
Q ss_pred HHcCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCC---CcHHHHHHHHHH
Q 003875 503 EKTGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFA---TYVQAKRIVKFI 579 (790)
Q Consensus 503 ~~~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P---~y~~aK~iIk~I 579 (790)
+..|...+++...++++=|+..+|...+ ++..+.++.+.. + ...+++.|...+ .+...+...+.+
T Consensus 562 ~~lg~l~~~~~~vIl~vGRl~~~KGid~-LIeA~~~L~~~~---~--------~v~LvIvG~g~~~~~~~~e~~~~~~~L 629 (816)
T 3s28_A 562 EHLCVLKDKKKPILFTMARLDRVKNLSG-LVEWYGKNTRLR---E--------LANLVVVGGDRRKESKDNEEKAEMKKM 629 (816)
T ss_dssp TEESCBSCTTSCEEEEECCCCTTTTHHH-HHHHHHHCHHHH---H--------HCEEEEECCCTTSCCCCHHHHHHHHHH
T ss_pred HHhcccCCCCCeEEEEEccCcccCCHHH-HHHHHHHHHhhC---C--------CeEEEEEeCCCcccccchhhHHHHHHH
Confidence 3456666889999999999999999887 776655543321 1 246777776552 334344444444
Q ss_pred HHHhhhhcCCcCCCCcceEEEec---CC--ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccch
Q 003875 580 TDVGATVNHDPEIGDLLKVIFVP---DY--NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVE 654 (790)
Q Consensus 580 ~~va~~vn~Dp~i~~~lKVvFle---nY--~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vE 654 (790)
.+.++..+ +.+ +|.|+. |+ .-.+.+.+-.++|+-...|. .|+.|.+-+-+|.-|++.|+|-.|...|
T Consensus 630 ~~li~~lg----L~~--~V~flG~~~~~v~~~eL~~~~~~aaDvfV~PS~--~EgfglvllEAMA~G~PVIasd~GG~~E 701 (816)
T 3s28_A 630 YDLIEEYK----LNG--QFRWISSQMDRVRNGELYRYICDTKGAFVQPAL--YEAFGLTVVEAMTCGLPTFATCKGGPAE 701 (816)
T ss_dssp HHHHHHTT----CBB--BEEEECCCCCHHHHHHHHHHHHHTTCEEEECCS--CBSSCHHHHHHHHTTCCEEEESSBTHHH
T ss_pred HHHHHHcC----CCC--cEEEccCccccCCHHHHHHHHHhcCeEEEECCC--ccCccHHHHHHHHcCCCEEEeCCCChHH
Confidence 44443222 333 788886 22 13355666668999999876 5999999999999999999999999988
Q ss_pred hcccccCcceeeccc
Q 003875 655 IRQEVGEENFFLFGA 669 (790)
Q Consensus 655 i~e~~g~en~~~fG~ 669 (790)
+.+.. +|+++|..
T Consensus 702 iV~dg--~~Gllv~p 714 (816)
T 3s28_A 702 IIVHG--KSGFHIDP 714 (816)
T ss_dssp HCCBT--TTBEEECT
T ss_pred HHccC--CcEEEeCC
Confidence 87543 68888865
No 12
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=96.77 E-value=0.0083 Score=61.13 Aligned_cols=129 Identities=12% Similarity=0.080 Sum_probs=91.3
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
++++....+++-|+..+|+..+ ++..+.++.+- . ....+++.|.. |. ...+-+++..+.
T Consensus 194 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l~~~---~--------~~~~l~i~G~g-~~---~~~l~~~~~~~~----- 252 (394)
T 3okp_A 194 FTDTTPVIACNSRLVPRKGQDS-LIKAMPQVIAA---R--------PDAQLLIVGSG-RY---ESTLRRLATDVS----- 252 (394)
T ss_dssp CCTTCCEEEEESCSCGGGCHHH-HHHHHHHHHHH---S--------TTCEEEEECCC-TT---HHHHHHHTGGGG-----
T ss_pred CCcCceEEEEEeccccccCHHH-HHHHHHHHHhh---C--------CCeEEEEEcCc-hH---HHHHHHHHhccc-----
Confidence 5677789999999999999887 76665544321 1 13577788853 21 233333332221
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCc-----cccCCCccchhhcccceEeeecccccchhcccccCcc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAG-----MEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEEN 663 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag-----~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en 663 (790)
+ +|.|+....-+-...++..||+....|+.+ .|+.|++-+-+|.-|++.|+|--|..-|+.+. .+
T Consensus 253 -----~--~v~~~g~~~~~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~---~~ 322 (394)
T 3okp_A 253 -----Q--NVKFLGRLEYQDMINTLAAADIFAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSGGAPETVTP---AT 322 (394)
T ss_dssp -----G--GEEEEESCCHHHHHHHHHHCSEEEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSSTTGGGGCCT---TT
T ss_pred -----C--eEEEcCCCCHHHHHHHHHhCCEEEecCccccccccccccCcHHHHHHHcCCCEEEeCCCChHHHHhc---CC
Confidence 2 689988865566667889999999988873 49999999999999999999988888776643 26
Q ss_pred eeecc
Q 003875 664 FFLFG 668 (790)
Q Consensus 664 ~~~fG 668 (790)
++++.
T Consensus 323 g~~~~ 327 (394)
T 3okp_A 323 GLVVE 327 (394)
T ss_dssp EEECC
T ss_pred ceEeC
Confidence 66664
No 13
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=96.73 E-value=0.0093 Score=61.95 Aligned_cols=132 Identities=14% Similarity=0.110 Sum_probs=88.7
Q ss_pred cCCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCC--cHHHHHHHHHHHHH
Q 003875 505 TGYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFAT--YVQAKRIVKFITDV 582 (790)
Q Consensus 505 ~g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~--y~~aK~iIk~I~~v 582 (790)
.|..-+.+....+++=|+..+|...+ ++..+.++.+- .+ ...+++.|...+. +..-+.+-+++.+.
T Consensus 176 ~~~~~~~~~~~il~vGr~~~~Kg~~~-li~a~~~l~~~---~~--------~~~l~ivG~g~~~~~~~l~~~~~~~~~~~ 243 (413)
T 3oy2_A 176 VGLSEYNDDVLFLNMNRNTARKRLDI-YVLAAARFISK---YP--------DAKVRFLCNSHHESKFDLHSIALRELVAS 243 (413)
T ss_dssp TTCGGGTTSEEEECCSCSSGGGTHHH-HHHHHHHHHHH---CT--------TCCEEEEEECCTTCSCCHHHHHHHHHHHH
T ss_pred cCCCcccCceEEEEcCCCchhcCcHH-HHHHHHHHHHh---CC--------CcEEEEEeCCcccchhhHHHHHHHHHHHc
Confidence 34333337889999999999999988 77766554221 21 3457777765443 32335555555544
Q ss_pred hhhhcCCcCCCCc----ceEEEecCC-ChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcc
Q 003875 583 GATVNHDPEIGDL----LKVIFVPDY-NVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQ 657 (790)
Q Consensus 583 a~~vn~Dp~i~~~----lKVvFlenY-~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e 657 (790)
+ +.++ -+||++..| +-+-...++.+||+-...|. .|..|.+-+-+|.-|++.|+|--|..-|+.+
T Consensus 244 ~--------l~~~v~~l~~vv~~~g~~~~~~~~~~~~~adv~v~pS~--~E~~~~~~lEAma~G~PvI~s~~~g~~e~v~ 313 (413)
T 3oy2_A 244 G--------VDNVFTHLNKIMINRTVLTDERVDMMYNACDVIVNCSS--GEGFGLCSAEGAVLGKPLIISAVGGADDYFS 313 (413)
T ss_dssp T--------CSCHHHHHTTEEEECSCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHTTTCCEEEECCHHHHHHSC
T ss_pred C--------cccccccccceeeccCcCCHHHHHHHHHhCCEEEeCCC--cCCCCcHHHHHHHcCCCEEEcCCCChHHHHc
Confidence 3 2221 025555554 43445557899999999776 6999999999999999999998888777664
Q ss_pred c
Q 003875 658 E 658 (790)
Q Consensus 658 ~ 658 (790)
.
T Consensus 314 ~ 314 (413)
T 3oy2_A 314 G 314 (413)
T ss_dssp T
T ss_pred c
Confidence 3
No 14
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=96.54 E-value=0.011 Score=61.73 Aligned_cols=136 Identities=15% Similarity=0.115 Sum_probs=92.5
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
++++....+++=|+...|...+ ++..+.+ +++..|. ....+++.|...+.....+.+.+++.+.+
T Consensus 239 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~---l~~~~p~------~~~~l~i~G~~~~~g~~~~~l~~~~~~~~----- 303 (438)
T 3c48_A 239 IPLHTKVVAFVGRLQPFKGPQV-LIKAVAA---LFDRDPD------RNLRVIICGGPSGPNATPDTYRHMAEELG----- 303 (438)
T ss_dssp CCSSSEEEEEESCBSGGGCHHH-HHHHHHH---HHHHCTT------CSEEEEEECCBC------CHHHHHHHHTT-----
T ss_pred CCCCCcEEEEEeeecccCCHHH-HHHHHHH---HHhhCCC------cceEEEEEeCCCCCCcHHHHHHHHHHHcC-----
Confidence 5677788999999999998877 6665544 3321111 13678888874332223345555554433
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
+.+ +|.|+....-+-...++.+||+-...|. .|..|++-+-+|.-|++.|+|--|...|+.+.. .+++++.
T Consensus 304 ---l~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~--~~g~~~~ 374 (438)
T 3c48_A 304 ---VEK--RIRFLDPRPPSELVAVYRAADIVAVPSF--NESFGLVAMEAQASGTPVIAARVGGLPIAVAEG--ETGLLVD 374 (438)
T ss_dssp ---CTT--TEEEECCCCHHHHHHHHHHCSEEEECCS--CCSSCHHHHHHHHTTCCEEEESCTTHHHHSCBT--TTEEEES
T ss_pred ---CCC--cEEEcCCCChHHHHHHHHhCCEEEECcc--ccCCchHHHHHHHcCCCEEecCCCChhHHhhCC--CcEEECC
Confidence 223 6889887654556678899999988775 589999999999999999999888888776542 5777765
No 15
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=96.45 E-value=0.0063 Score=56.95 Aligned_cols=136 Identities=15% Similarity=0.091 Sum_probs=95.4
Q ss_pred CCcCCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhh
Q 003875 506 GYSVSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGAT 585 (790)
Q Consensus 506 g~~l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~ 585 (790)
+..++++..+.+++-|+..+|+..+ ++..+.++ . ...+++.|..... ..+.+++.+...-
T Consensus 16 ~~~~~~~~~~i~~~G~~~~~Kg~~~-li~a~~~l---~------------~~~l~i~G~~~~~----~~l~~~~~~~~~~ 75 (177)
T 2f9f_A 16 KFKFKCYGDFWLSVNRIYPEKRIEL-QLEVFKKL---Q------------DEKLYIVGWFSKG----DHAERYARKIMKI 75 (177)
T ss_dssp TCCCCCCCSCEEEECCSSGGGTHHH-HHHHHHHC---T------------TSCEEEEBCCCTT----STHHHHHHHHHHH
T ss_pred ccccCCCCCEEEEEeccccccCHHH-HHHHHHhC---C------------CcEEEEEecCccH----HHHHHHHHhhhcc
Confidence 4678888899999999999998877 55443332 1 2357777754332 2344444422111
Q ss_pred hcCCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCccee
Q 003875 586 VNHDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFF 665 (790)
Q Consensus 586 vn~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~ 665 (790)
+.+ +|.|+...+-+-...++..||+....|+ .|..|++-+-+|.-|++.|+|-.|...|+.+.. .+++
T Consensus 76 ------l~~--~v~~~g~~~~~e~~~~~~~adi~v~ps~--~e~~~~~~~Eama~G~PvI~~~~~~~~e~i~~~--~~g~ 143 (177)
T 2f9f_A 76 ------APD--NVKFLGSVSEEELIDLYSRCKGLLCTAK--DEDFGLTPIEAMASGKPVIAVNEGGFKETVINE--KTGY 143 (177)
T ss_dssp ------SCT--TEEEEESCCHHHHHHHHHHCSEEEECCS--SCCSCHHHHHHHHTTCCEEEESSHHHHHHCCBT--TTEE
T ss_pred ------cCC--cEEEeCCCCHHHHHHHHHhCCEEEeCCC--cCCCChHHHHHHHcCCcEEEeCCCCHHHHhcCC--CccE
Confidence 222 6888887766667788899999998776 789999999999999999999888888876543 6778
Q ss_pred ecccchhh
Q 003875 666 LFGARAHE 673 (790)
Q Consensus 666 ~fG~~~~e 673 (790)
++..+.++
T Consensus 144 ~~~~d~~~ 151 (177)
T 2f9f_A 144 LVNADVNE 151 (177)
T ss_dssp EECSCHHH
T ss_pred EeCCCHHH
Confidence 87333333
No 16
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=96.32 E-value=0.011 Score=55.25 Aligned_cols=135 Identities=17% Similarity=0.075 Sum_probs=90.9
Q ss_pred HHHcCCcCCCCcceeccccccc-ccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHH
Q 003875 502 KEKTGYSVSPDAMFDIQVKRIH-EYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFIT 580 (790)
Q Consensus 502 ~~~~g~~l~pd~lfdvq~kR~h-eYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~ 580 (790)
+++.|. +++. +.+++-|+. .+|...+ ++..+.+ ++. +.. ..+..+++.|...|.+ .+.+.+++.
T Consensus 28 r~~~~~--~~~~-~i~~~G~~~~~~K~~~~-li~a~~~---l~~-~~~-----~~~~~l~i~G~~~~~~--~~~l~~~~~ 92 (200)
T 2bfw_A 28 LSKFGM--DEGV-TFMFIGRFDRGQKGVDV-LLKAIEI---LSS-KKE-----FQEMRFIIIGKGDPEL--EGWARSLEE 92 (200)
T ss_dssp HHHTTC--CSCE-EEEEESCBCSSSSCHHH-HHHHHHH---HTT-SGG-----GGGEEEEEECCBCHHH--HHHHHHHHH
T ss_pred HHHcCC--CCCC-EEEEeeccccccCCHHH-HHHHHHH---HHh-hcc-----CCCeEEEEECCCChHH--HHHHHHHHH
Confidence 444564 3333 778899999 8998877 6655443 430 000 1256788888754422 233334433
Q ss_pred HHhhhhcCCcCCCCcceEEE-ecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccc
Q 003875 581 DVGATVNHDPEIGDLLKVIF-VPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEV 659 (790)
Q Consensus 581 ~va~~vn~Dp~i~~~lKVvF-lenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~ 659 (790)
... +|.| +...+-+-...++..||+....|+. |..|++-+-+|..|++.|+|--|..-|+.
T Consensus 93 ~~~-------------~v~~~~g~~~~~~~~~~~~~ad~~l~ps~~--e~~~~~~~Ea~a~G~PvI~~~~~~~~e~~--- 154 (200)
T 2bfw_A 93 KHG-------------NVKVITEMLSREFVRELYGSVDFVIIPSYF--EPFGLVALEAMCLGAIPIASAVGGLRDII--- 154 (200)
T ss_dssp HCT-------------TEEEECSCCCHHHHHHHHTTCSEEEECCSC--CSSCHHHHHHHHTTCEEEEESCHHHHHHC---
T ss_pred hcC-------------CEEEEeccCCHHHHHHHHHHCCEEEECCCC--CCccHHHHHHHHCCCCEEEeCCCChHHHc---
Confidence 221 5888 7766555667788999999997765 99999999999999999999888777766
Q ss_pred cCcceeeccc
Q 003875 660 GEENFFLFGA 669 (790)
Q Consensus 660 g~en~~~fG~ 669 (790)
...+++++..
T Consensus 155 ~~~~g~~~~~ 164 (200)
T 2bfw_A 155 TNETGILVKA 164 (200)
T ss_dssp CTTTCEEECT
T ss_pred CCCceEEecC
Confidence 3467777753
No 17
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=96.31 E-value=0.01 Score=61.40 Aligned_cols=127 Identities=20% Similarity=0.239 Sum_probs=85.4
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
++++....+++-|+..+|...+ ++..+. ++++ . .|..+++.|.. |. ...+.+++.+.+
T Consensus 207 ~~~~~~~i~~~G~~~~~Kg~~~-li~a~~---~l~~-~--------~~~~l~i~G~g-~~---~~~l~~~~~~~~----- 264 (394)
T 2jjm_A 207 ISESEKILIHISNFRKVKRVQD-VVQAFA---KIVT-E--------VDAKLLLVGDG-PE---FCTILQLVKNLH----- 264 (394)
T ss_dssp CC---CEEEEECCCCGGGTHHH-HHHHHH---HHHH-S--------SCCEEEEECCC-TT---HHHHHHHHHTTT-----
T ss_pred CCCCCeEEEEeeccccccCHHH-HHHHHH---HHHh-h--------CCCEEEEECCc-hH---HHHHHHHHHHcC-----
Confidence 4466778889999999998877 655443 3443 1 25678888853 21 234444444332
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
+.+ +|.|+. + .+-...++.+||+....|. .|+.|++-+-+|..|++.|+|--|...|+.++. +++++|.
T Consensus 265 ---l~~--~v~~~g-~-~~~~~~~~~~adv~v~ps~--~e~~~~~~~EAma~G~PvI~~~~~~~~e~v~~~--~~g~~~~ 333 (394)
T 2jjm_A 265 ---IED--RVLFLG-K-QDNVAELLAMSDLMLLLSE--KESFGLVLLEAMACGVPCIGTRVGGIPEVIQHG--DTGYLCE 333 (394)
T ss_dssp ---CGG--GBCCCB-S-CSCTHHHHHTCSEEEECCS--CCSCCHHHHHHHHTTCCEEEECCTTSTTTCCBT--TTEEEEC
T ss_pred ---CCC--eEEEeC-c-hhhHHHHHHhCCEEEeccc--cCCCchHHHHHHhcCCCEEEecCCChHHHhhcC--CceEEeC
Confidence 122 577776 3 3334567789999998776 699999999999999999999888887776543 5777764
No 18
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=96.29 E-value=0.018 Score=61.84 Aligned_cols=136 Identities=14% Similarity=0.078 Sum_probs=94.2
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecC-CC--CcH-----H---HHHHHH
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKA-FA--TYV-----Q---AKRIVK 577 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA-~P--~y~-----~---aK~iIk 577 (790)
++++....+++=|+...|...+ ++..+.++.+-. +. ...++++|.. .| .|. . -+.+.+
T Consensus 258 ~~~~~~~i~~vGrl~~~Kg~~~-li~a~~~l~~~~---~~-------~~~l~i~G~~~~~~~~y~~l~~~~~~y~~~l~~ 326 (499)
T 2r60_A 258 ERMELPAIIASSRLDQKKNHYG-LVEAYVQNKELQ---DK-------ANLVLTLRGIENPFEDYSRAGQEEKEILGKIIE 326 (499)
T ss_dssp GGTTSCEEEECSCCCGGGCHHH-HHHHHHTCHHHH---HH-------CEEEEEESSCSBTTTBCTTSCHHHHHHHHHHHH
T ss_pred cCCCCcEEEEeecCccccCHHH-HHHHHHHHHHhC---CC-------ceEEEEECCCCCcccccccccccchHHHHHHHH
Confidence 4567778999999999999887 666554432211 11 3467777762 22 121 1 445555
Q ss_pred HHHHHhhhhcCCcCCCCcceEEEecCCChhhhhhhcccc----ccccccCCCccccCCCccchhhcccceEeeecccccc
Q 003875 578 FITDVGATVNHDPEIGDLLKVIFVPDYNVSVAELLIPAS----ELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANV 653 (790)
Q Consensus 578 ~I~~va~~vn~Dp~i~~~lKVvFlenY~vslAe~lipa~----Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~v 653 (790)
++.+.+ +.+ +|.|+....-+-...++.+| |+-...|. .|..|.+-+-+|.-|++.|+|--|...
T Consensus 327 ~~~~~~--------l~~--~V~~~G~v~~~~~~~~~~~a~~~~dv~v~pS~--~Eg~~~~~lEAma~G~PvI~s~~~g~~ 394 (499)
T 2r60_A 327 LIDNND--------CRG--KVSMFPLNSQQELAGCYAYLASKGSVFALTSF--YEPFGLAPVEAMASGLPAVVTRNGGPA 394 (499)
T ss_dssp HHHHTT--------CBT--TEEEEECCSHHHHHHHHHHHHHTTCEEEECCS--CBCCCSHHHHHHHTTCCEEEESSBHHH
T ss_pred HHHhcC--------CCc--eEEECCCCCHHHHHHHHHhcCcCCCEEEECcc--cCCCCcHHHHHHHcCCCEEEecCCCHH
Confidence 555443 223 68998876556666788999 99998776 499999999999999999999888888
Q ss_pred hhcccccCcceeeccc
Q 003875 654 EIRQEVGEENFFLFGA 669 (790)
Q Consensus 654 Ei~e~~g~en~~~fG~ 669 (790)
|+.+.. +|++++..
T Consensus 395 e~v~~~--~~g~l~~~ 408 (499)
T 2r60_A 395 EILDGG--KYGVLVDP 408 (499)
T ss_dssp HHTGGG--TSSEEECT
T ss_pred HHhcCC--ceEEEeCC
Confidence 876543 57787753
No 19
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=95.16 E-value=0.07 Score=54.69 Aligned_cols=124 Identities=10% Similarity=0.047 Sum_probs=83.8
Q ss_pred Ccceecccccc-cccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003875 512 DAMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 512 d~lfdvq~kR~-heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp 590 (790)
+....+++-|+ ..+|...+ ++..+. ++++.. ....+++.|... . +.+.+++.+.
T Consensus 207 ~~~~i~~~G~~~~~~Kg~~~-li~a~~---~l~~~~--------~~~~l~i~G~~~---~--~~l~~~~~~~-------- 261 (406)
T 2gek_A 207 EGRTVLFLGRYDEPRKGMAV-LLAALP---KLVARF--------PDVEILIVGRGD---E--DELREQAGDL-------- 261 (406)
T ss_dssp SSCEEEEESCTTSGGGCHHH-HHHHHH---HHHTTS--------TTCEEEEESCSC---H--HHHHHHTGGG--------
T ss_pred CCeEEEEEeeeCccccCHHH-HHHHHH---HHHHHC--------CCeEEEEEcCCc---H--HHHHHHHHhc--------
Confidence 45678889999 99998877 655443 344311 245788888642 2 4444444332
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeec
Q 003875 591 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLF 667 (790)
Q Consensus 591 ~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~f 667 (790)
.+ +|.|+...+=.-...++..||+-...|. ..|..|++-+-+|..|++.|+|--|..-|+.+.. +++++|
T Consensus 262 --~~--~v~~~g~~~~~~~~~~~~~adv~v~ps~-~~e~~~~~~~Ea~a~G~PvI~~~~~~~~e~i~~~--~~g~~~ 331 (406)
T 2gek_A 262 --AG--HLRFLGQVDDATKASAMRSADVYCAPHL-GGESFGIVLVEAMAAGTAVVASDLDAFRRVLADG--DAGRLV 331 (406)
T ss_dssp --GG--GEEECCSCCHHHHHHHHHHSSEEEECCC-SCCSSCHHHHHHHHHTCEEEECCCHHHHHHHTTT--TSSEEC
T ss_pred --cC--cEEEEecCCHHHHHHHHHHCCEEEecCC-CCCCCchHHHHHHHcCCCEEEecCCcHHHHhcCC--CceEEe
Confidence 11 5888876543434677889999998754 3688999999999999999999777776665432 456665
No 20
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=95.01 E-value=0.036 Score=56.18 Aligned_cols=128 Identities=13% Similarity=0.088 Sum_probs=90.3
Q ss_pred CCCCcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcC
Q 003875 509 VSPDAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNH 588 (790)
Q Consensus 509 l~pd~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~ 588 (790)
++++....+++-|+..+|+..+ ++..+.+ +.+ .. ..+..+++.|.... +.+.+++.+.+
T Consensus 192 ~~~~~~~i~~~G~~~~~K~~~~-li~a~~~---l~~---~~----~~~~~l~i~G~g~~-----~~~~~~~~~~~----- 250 (374)
T 2iw1_A 192 IKEQQNLLLQVGSDFGRKGVDR-SIEALAS---LPE---SL----RHNTLLFVVGQDKP-----RKFEALAEKLG----- 250 (374)
T ss_dssp CCTTCEEEEEECSCTTTTTHHH-HHHHHHT---SCH---HH----HHTEEEEEESSSCC-----HHHHHHHHHHT-----
T ss_pred CCCCCeEEEEeccchhhcCHHH-HHHHHHH---hHh---cc----CCceEEEEEcCCCH-----HHHHHHHHHcC-----
Confidence 5667788889999999999887 6554333 221 00 01467888887421 44555555543
Q ss_pred CcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeecc
Q 003875 589 DPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 589 Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG 668 (790)
+.+ +|.|+.. .+-...++.+||+-...|. .|+.|++-+-+|.-|.+.|+|--|...|+.++. .+++++.
T Consensus 251 ---~~~--~v~~~g~--~~~~~~~~~~ad~~v~ps~--~e~~~~~~~Ea~a~G~Pvi~~~~~~~~e~i~~~--~~g~~~~ 319 (374)
T 2iw1_A 251 ---VRS--NVHFFSG--RNDVSELMAAADLLLHPAY--QEAAGIVLLEAITAGLPVLTTAVCGYAHYIADA--NCGTVIA 319 (374)
T ss_dssp ---CGG--GEEEESC--CSCHHHHHHHCSEEEECCS--CCSSCHHHHHHHHHTCCEEEETTSTTTHHHHHH--TCEEEEC
T ss_pred ---CCC--cEEECCC--cccHHHHHHhcCEEEeccc--cCCcccHHHHHHHCCCCEEEecCCCchhhhccC--CceEEeC
Confidence 112 6888874 3445667899999998776 599999999999999999999878888876543 6777775
No 21
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=94.47 E-value=0.16 Score=45.98 Aligned_cols=111 Identities=19% Similarity=0.165 Sum_probs=76.4
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 003875 514 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 593 (790)
Q Consensus 514 lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~ 593 (790)
+..+++=|+..+|...+ ++..+.+ +++ . .+..+++.|.. |. ...+.+++.+.+-
T Consensus 3 ~~i~~~G~~~~~Kg~~~-li~a~~~---l~~-~--------~~~~l~i~G~g-~~---~~~~~~~~~~~~~--------- 56 (166)
T 3qhp_A 3 FKIAMVGRYSNEKNQSV-LIKAVAL---SKY-K--------QDIVLLLKGKG-PD---EKKIKLLAQKLGV--------- 56 (166)
T ss_dssp EEEEEESCCSTTTTHHH-HHHHHHT---CTT-G--------GGEEEEEECCS-TT---HHHHHHHHHHHTC---------
T ss_pred eEEEEEeccchhcCHHH-HHHHHHH---hcc-C--------CCeEEEEEeCC-cc---HHHHHHHHHHcCC---------
Confidence 46778889999999887 6665444 332 1 25678888863 22 2455555554431
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccc-eEeeecc-cccchhc
Q 003875 594 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGC-ILIGTLD-GANVEIR 656 (790)
Q Consensus 594 ~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~-l~lgtlD-Ga~vEi~ 656 (790)
+|.| ...+-+-...++..||+....|. .|..|.+-+-+|..|+ +.|+|-+ |..-|+.
T Consensus 57 ---~v~~-g~~~~~~~~~~~~~adv~v~ps~--~e~~~~~~~Eama~G~vPvi~~~~~~~~~~~~ 115 (166)
T 3qhp_A 57 ---KAEF-GFVNSNELLEILKTCTLYVHAAN--VESEAIACLEAISVGIVPVIANSPLSATRQFA 115 (166)
T ss_dssp ---EEEC-CCCCHHHHHHHHTTCSEEEECCC--SCCCCHHHHHHHHTTCCEEEECCTTCGGGGGC
T ss_pred ---eEEE-eecCHHHHHHHHHhCCEEEECCc--ccCccHHHHHHHhcCCCcEEeeCCCCchhhhc
Confidence 4555 44444556678899999998777 6999999999999997 9999654 4555554
No 22
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=93.46 E-value=0.14 Score=51.76 Aligned_cols=130 Identities=19% Similarity=0.126 Sum_probs=88.1
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcC
Q 003875 512 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPE 591 (790)
Q Consensus 512 d~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~ 591 (790)
+..+.+++-|+...|...+ ++..+.+. +..+++.|.. |.. ..+-+++..++
T Consensus 161 ~~~~i~~vG~~~~~Kg~~~-li~a~~~~----------------~~~l~i~G~g-~~~---~~l~~~~~~~~-------- 211 (342)
T 2iuy_A 161 KEDFLLFMGRVSPHKGALE-AAAFAHAC----------------GRRLVLAGPA-WEP---EYFDEITRRYG-------- 211 (342)
T ss_dssp CCSCEEEESCCCGGGTHHH-HHHHHHHH----------------TCCEEEESCC-CCH---HHHHHHHHHHT--------
T ss_pred CCCEEEEEeccccccCHHH-HHHHHHhc----------------CcEEEEEeCc-ccH---HHHHHHHHHhC--------
Confidence 3457888999999999887 66544332 2357777764 222 22333333332
Q ss_pred CCCcceEEEecCCChhhhhhhccccccccccCCC--------ccccCCCccchhhcccceEeeecccccchhcccccCcc
Q 003875 592 IGDLLKVIFVPDYNVSVAELLIPASELSQHISTA--------GMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEEN 663 (790)
Q Consensus 592 i~~~lKVvFlenY~vslAe~lipa~Dls~~ista--------g~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en 663 (790)
+ +|.|+..-.=.-...++.+||+....|+. -.|..|++-+-+|.-|++.|+|--|..-|+.+..|.++
T Consensus 212 --~--~v~~~g~~~~~~l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~~~~e~~~~~~~~~ 287 (342)
T 2iuy_A 212 --S--TVEPIGEVGGERRLDLLASAHAVLAMSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNGCLAEIVPSVGEVV 287 (342)
T ss_dssp --T--TEEECCCCCHHHHHHHHHHCSEEEECCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTTTHHHHGGGGEEEC
T ss_pred --C--CEEEeccCCHHHHHHHHHhCCEEEECCcccccccccccccCccHHHHHHHhcCCCEEEcCCCChHHHhcccCCCc
Confidence 2 58887765443346678899999887761 16999999999999999999998888888876633467
Q ss_pred eeecccchhhh
Q 003875 664 FFLFGARAHEI 674 (790)
Q Consensus 664 ~~~fG~~~~ev 674 (790)
+++|..+.+++
T Consensus 288 g~~~~~d~~~l 298 (342)
T 2iuy_A 288 GYGTDFAPDEA 298 (342)
T ss_dssp CSSSCCCHHHH
T ss_pred eEEcCCCHHHH
Confidence 77776533333
No 23
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=88.63 E-value=3.9 Score=44.44 Aligned_cols=104 Identities=12% Similarity=0.087 Sum_probs=68.2
Q ss_pred eecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC-
Q 003875 515 FDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG- 593 (790)
Q Consensus 515 fdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~- 593 (790)
+.+++-|+.. |.... ++..+.+ |++..| ...+++.|.. +. .-..+.+++...+ +.
T Consensus 378 ~v~~~g~~~~-K~~~~-li~a~~~---l~~~~~--------~~~l~i~G~~--g~-~~~~l~~~~~~~~--------l~~ 433 (568)
T 2vsy_A 378 VVLCCFNNSY-KLNPQ-SMARMLA---VLREVP--------DSVLWLLSGP--GE-ADARLRAFAHAQG--------VDA 433 (568)
T ss_dssp CEEEECCCGG-GCCHH-HHHHHHH---HHHHCT--------TCEEEEECCS--TT-HHHHHHHHHHHTT--------CCG
T ss_pred EEEEeCCccc-cCCHH-HHHHHHH---HHHhCC--------CcEEEEecCC--HH-HHHHHHHHHHHcC--------CCh
Confidence 3447888888 88776 6655444 432121 3467777752 21 2344555554433 22
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeee
Q 003875 594 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGT 647 (790)
Q Consensus 594 ~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgt 647 (790)
+ +|+|+.--+-.-...++.+|||....|.. ..|++-+-+|.-|++.|+.
T Consensus 434 ~--~v~~~g~~~~~~~~~~~~~adv~v~ps~~---~~g~~~lEAma~G~Pvv~~ 482 (568)
T 2vsy_A 434 Q--RLVFMPKLPHPQYLARYRHADLFLDTHPY---NAHTTASDALWTGCPVLTT 482 (568)
T ss_dssp G--GEEEECCCCHHHHHHHGGGCSEEECCSSS---CCSHHHHHHHHTTCCEEBC
T ss_pred h--HEEeeCCCCHHHHHHHHhcCCEEeeCCCC---CCcHHHHHHHhCCCCEEec
Confidence 2 69998764433445678999999988775 7899999999999999994
No 24
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=81.76 E-value=8.8 Score=42.58 Aligned_cols=141 Identities=7% Similarity=0.010 Sum_probs=84.3
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcH-HHHHHHHHHHHHhhhhcCCc
Q 003875 512 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYV-QAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 512 d~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~-~aK~iIk~I~~va~~vn~Dp 590 (790)
+..++++|-|+...|.... +|.-+.++.+ + .|..+ ..+++|..|....++. .-..+-+.+.+++..+|..-
T Consensus 254 ~~~vil~VgRl~~~Kgi~~-ll~A~~~ll~--~-~p~~~----~~v~Lv~vG~p~~~~~~~~~~l~~~l~~l~~~in~~~ 325 (482)
T 1uqt_A 254 NVQNIFSVERLDYSKGLPE-RFLAYEALLE--K-YPQHH----GKIRYTQIAPTSRGDVQAYQDIRHQLENEAGRINGKY 325 (482)
T ss_dssp TCEEEEEECCBCGGGCHHH-HHHHHHHHHH--H-CGGGT----TTEEEEEECCBCSTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCcccCCHHH-HHHHHHHHHH--h-Ccccc----CcEEEEEEECCCccchHHHHHHHHHHHHHHHHHhhhc
Confidence 4567889999999998877 7766665522 2 33322 2456776665433322 12334445555554444211
Q ss_pred CCCCcceEEEec-CCChhhhhhhccccccccccCCCccccCCCccchhhccc------ceEeeecccccchhcccccCcc
Q 003875 591 EIGDLLKVIFVP-DYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNG------CILIGTLDGANVEIRQEVGEEN 663 (790)
Q Consensus 591 ~i~~~lKVvFle-nY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG------~l~lgtlDGa~vEi~e~~g~en 663 (790)
...+.-.|+|+. ...-+--..+..+|||-...|. .|.-|..-+-+|.-| .+.+|..-|..-|+ ++
T Consensus 326 g~~~~~~v~~~~g~v~~~el~~ly~~ADv~v~pS~--~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G~~~~l------~~ 397 (482)
T 1uqt_A 326 GQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPL--RDGMNLVAKEYVAAQDPANPGVLVLSQFAGAANEL------TS 397 (482)
T ss_dssp CBTTBCSEEEECSCCCHHHHHHHHHHCSEEEECCS--SBSCCHHHHHHHHHSCTTSCCEEEEETTBGGGGTC------TT
T ss_pred ccCCCceEEEeCCCCCHHHHHHHHHHccEEEECCC--cccCCchHHHHHHhCCCCCCCCEEEECCCCCHHHh------CC
Confidence 111122488764 3344444578899999999887 477777777776655 57777777876655 25
Q ss_pred eeecc
Q 003875 664 FFLFG 668 (790)
Q Consensus 664 ~~~fG 668 (790)
++++.
T Consensus 398 g~lv~ 402 (482)
T 1uqt_A 398 ALIVN 402 (482)
T ss_dssp SEEEC
T ss_pred eEEEC
Confidence 66664
No 25
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=81.41 E-value=4.2 Score=41.17 Aligned_cols=125 Identities=10% Similarity=0.055 Sum_probs=69.7
Q ss_pred CCcceeccccccccc-ccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCC
Q 003875 511 PDAMFDIQVKRIHEY-KRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHD 589 (790)
Q Consensus 511 pd~lfdvq~kR~heY-KRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~D 589 (790)
++..+.+.+-|+.+. |.... ++..+ .++++..| ...+|+++ +|.. .+.+.+.+... .
T Consensus 204 ~~~~vl~~~gr~~~~~K~~~~-li~a~---~~l~~~~~--------~~~~i~~~--g~~~----~~~~~~~~~~~---~- 261 (375)
T 3beo_A 204 NNRLVLMTAHRRENLGEPMRN-MFRAI---KRLVDKHE--------DVQVVYPV--HMNP----VVRETANDILG---D- 261 (375)
T ss_dssp TSEEEEEECCCGGGTTHHHHH-HHHHH---HHHHHHCT--------TEEEEEEC--CSCH----HHHHHHHHHHT---T-
T ss_pred CCCeEEEEecccccchhHHHH-HHHHH---HHHHhhCC--------CeEEEEeC--CCCH----HHHHHHHHHhh---c-
Confidence 344556678888765 76544 44443 33432011 24566653 4432 12222322211 1
Q ss_pred cCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccchhcccccCcceeecc
Q 003875 590 PEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEIRQEVGEENFFLFG 668 (790)
Q Consensus 590 p~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlD-Ga~vEi~e~~g~en~~~fG 668 (790)
.+ +|.|+....-.-...++.+||+-..-| |+.-+-+|.-|.+.|+|-+ |..-|+.+. .+++++.
T Consensus 262 ---~~--~v~~~g~~~~~~~~~~~~~ad~~v~~s-------g~~~lEA~a~G~Pvi~~~~~~~~~e~v~~---g~g~~v~ 326 (375)
T 3beo_A 262 ---YG--RIHLIEPLDVIDFHNVAARSYLMLTDS-------GGVQEEAPSLGVPVLVLRDTTERPEGIEA---GTLKLAG 326 (375)
T ss_dssp ---CT--TEEEECCCCHHHHHHHHHTCSEEEECC-------HHHHHHHHHHTCCEEECSSCCSCHHHHHT---TSEEECC
T ss_pred ---cC--CEEEeCCCCHHHHHHHHHhCcEEEECC-------CChHHHHHhcCCCEEEecCCCCCceeecC---CceEEcC
Confidence 12 588865443334456778999987543 4446789999999999966 666665432 2677764
Q ss_pred cchh
Q 003875 669 ARAH 672 (790)
Q Consensus 669 ~~~~ 672 (790)
.+.+
T Consensus 327 ~d~~ 330 (375)
T 3beo_A 327 TDEE 330 (375)
T ss_dssp SCHH
T ss_pred CCHH
Confidence 4433
No 26
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=80.58 E-value=14 Score=37.53 Aligned_cols=65 Identities=17% Similarity=0.046 Sum_probs=43.3
Q ss_pred eEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecc-cccchhcccccCcceeecccch
Q 003875 597 KVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLD-GANVEIRQEVGEENFFLFGARA 671 (790)
Q Consensus 597 KVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlD-Ga~vEi~e~~g~en~~~fG~~~ 671 (790)
+|.|+..-.-.-...++.+||+-..-| |+.-+-+|.-|.+.|+|-. |..-|+.+. .+++++..+.
T Consensus 264 ~v~~~g~~~~~~~~~~~~~ad~~v~~S-------g~~~lEA~a~G~PvI~~~~~~~~~e~v~~---g~g~lv~~d~ 329 (384)
T 1vgv_A 264 NVILIDPQEYLPFVWLMNHAWLILTDS-------GGIQEEAPSLGKPVLVMRDTTERPEAVTA---GTVRLVGTDK 329 (384)
T ss_dssp TEEEECCCCHHHHHHHHHHCSEEEESS-------STGGGTGGGGTCCEEEESSCCSCHHHHHH---TSEEEECSSH
T ss_pred CEEEeCCCCHHHHHHHHHhCcEEEECC-------cchHHHHHHcCCCEEEccCCCCcchhhhC---CceEEeCCCH
Confidence 588864322234456778999977544 5557799999999999976 666665432 2677765433
No 27
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=53.09 E-value=41 Score=35.97 Aligned_cols=123 Identities=10% Similarity=0.040 Sum_probs=76.2
Q ss_pred Ccceecccccc-cccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCc
Q 003875 512 DAMFDIQVKRI-HEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 512 d~lfdvq~kR~-heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp 590 (790)
+..+.+++=|+ .+.|...+ ++..+.++ ++..|.. .+..++++|...... .+
T Consensus 240 ~~~~il~~gr~~~~~Kg~~~-li~A~~~l---~~~~~~~-----~~~~l~ivG~~~~~~---------------~l---- 291 (413)
T 2x0d_A 240 KEKIILVYGRPSVKRNAFTL-IVEALKIF---VQKYDRS-----NEWKIISVGEKHKDI---------------AL---- 291 (413)
T ss_dssp CCSEEEEEECTTCGGGCHHH-HHHHHHHH---HHHCTTG-----GGCEEEEEESCCCCE---------------EE----
T ss_pred CCCEEEEEecCchhccCHHH-HHHHHHHH---HHhCCCC-----CceEEEEEcCCchhh---------------hc----
Confidence 33455666676 56666655 55555443 3211110 024677777643320 01
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeecccccchhcccccCcceeeccc
Q 003875 591 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDGANVEIRQEVGEENFFLFGA 669 (790)
Q Consensus 591 ~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDGa~vEi~e~~g~en~~~fG~ 669 (790)
.+. -+|.|+..-.-+--..++.+||+....|. .|.-|..-+-+|.-|++.|++ +|...|+.+. .+|++++-.
T Consensus 292 ~~~--~~v~f~G~~~~~~l~~~~~~adv~v~pS~--~E~~g~~~lEAmA~G~PVV~~-~~g~~e~v~~--~~~G~lv~~ 363 (413)
T 2x0d_A 292 GKG--IHLNSLGKLTLEDYADLLKRSSIGISLMI--SPHPSYPPLEMAHFGLRVITN-KYENKDLSNW--HSNIVSLEQ 363 (413)
T ss_dssp ETT--EEEEEEESCCHHHHHHHHHHCCEEECCCS--SSSCCSHHHHHHHTTCEEEEE-CBTTBCGGGT--BTTEEEESS
T ss_pred CCc--CcEEEcCCCCHHHHHHHHHhCCEEEEecC--CCCCCcHHHHHHhCCCcEEEe-CCCcchhhhc--CCCEEEeCC
Confidence 112 27889876555555667899999998876 366688889999999999997 4445677654 368888753
No 28
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=49.83 E-value=57 Score=36.80 Aligned_cols=137 Identities=13% Similarity=0.051 Sum_probs=80.7
Q ss_pred CcceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcH-HHHHHHHHHHHHhhhhcCCc
Q 003875 512 DAMFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYV-QAKRIVKFITDVGATVNHDP 590 (790)
Q Consensus 512 d~lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~-~aK~iIk~I~~va~~vn~Dp 590 (790)
+.-++.+|-|+...|-... +|.-. ++ +++ .|.- ..+++|..|....++. .-+.+-+.|.+++..||..-
T Consensus 280 ~~~lIl~VgRLd~~KGi~~-lL~Af-~l--l~~-~P~~-----~~v~Lv~Vg~psr~~~~~y~~l~~~l~~lv~~in~~~ 349 (496)
T 3t5t_A 280 GHRLVVHSGRTDPIKNAER-AVRAF-VL--AAR-GGGL-----EKTRMLVRMNPNRLYVPANADYVHRVETAVAEANAEL 349 (496)
T ss_dssp TSEEEEEEEESSGGGCHHH-HHHHH-HH--HHH-TSSC-----TTEEEEEEEECCCTTSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcccCccccCHHH-HHHHH-HH--HHh-Cccc-----ceEEEEEEECCCCCCchHHHHHHHHHHHHHHHhcccc
Confidence 3457888999998887766 66555 43 222 3321 1345665554443332 23445556666665555210
Q ss_pred CCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhc----ccceEeeecccccchhcccccCcceee
Q 003875 591 EIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAM----NGCILIGTLDGANVEIRQEVGEENFFL 666 (790)
Q Consensus 591 ~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfam----NG~l~lgtlDGa~vEi~e~~g~en~~~ 666 (790)
+ ..+|+|+..-...---.+..+|||-..+|++ |-=|.--+-+|. .|.+.+|..-|+--|+. +++++
T Consensus 350 --g-~~~V~f~g~v~~~el~aly~~ADv~vv~Slr--EGfgLv~~EamA~~~~~g~lVlSe~aGa~~~l~-----~~all 419 (496)
T 3t5t_A 350 --G-SDTVRIDNDNDVNHTIACFRRADLLIFNSTV--DGQNLSTFEAPLVNERDADVILSETCGAAEVLG-----EYCRS 419 (496)
T ss_dssp --C-TTSEEEEECCCHHHHHHHHHHCSEEEECCSS--BSCCSHHHHHHHHCSSCCEEEEETTBTTHHHHG-----GGSEE
T ss_pred --C-CcCEEEeCCCCHHHHHHHHHhccEEEECccc--ccCChhHHHHHHhCCCCCCEEEeCCCCCHHHhC-----CCEEE
Confidence 0 1168888643444445688999999988885 444444444443 47899999888876652 35555
Q ss_pred cc
Q 003875 667 FG 668 (790)
Q Consensus 667 fG 668 (790)
+.
T Consensus 420 Vn 421 (496)
T 3t5t_A 420 VN 421 (496)
T ss_dssp EC
T ss_pred EC
Confidence 54
No 29
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=47.09 E-value=45 Score=33.49 Aligned_cols=102 Identities=7% Similarity=-0.072 Sum_probs=61.1
Q ss_pred CCCc-ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeE-EEEeecCCCCcHHHHHHHHHHHHHhhhhc
Q 003875 510 SPDA-MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRV-CIFGGKAFATYVQAKRIVKFITDVGATVN 587 (790)
Q Consensus 510 ~pd~-lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~-~IFaGKA~P~y~~aK~iIk~I~~va~~vn 587 (790)
+++. .+.+.+.|+...|...+ ++..+.+ +++ +.. ++++|... . +.+.+++.+.+
T Consensus 180 ~~~~~~il~~~g~~~~~k~~~~-li~a~~~---l~~-----------~~~~l~i~G~~~---~--~~l~~~~~~~~---- 235 (364)
T 1f0k_A 180 REGPVRVLVVGGSQGARILNQT-MPQVAAK---LGD-----------SVTIWHQSGKGS---Q--QSVEQAYAEAG---- 235 (364)
T ss_dssp CCSSEEEEEECTTTCCHHHHHH-HHHHHHH---HGG-----------GEEEEEECCTTC---H--HHHHHHHHHTT----
T ss_pred CCCCcEEEEEcCchHhHHHHHH-HHHHHHH---hcC-----------CcEEEEEcCCch---H--HHHHHHHhhcC----
Confidence 3443 34556778888787665 4444333 321 223 56777654 1 34444443332
Q ss_pred CCcCCCCcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhhcccceEeeeccc
Q 003875 588 HDPEIGDLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFAMNGCILIGTLDG 650 (790)
Q Consensus 588 ~Dp~i~~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfamNG~l~lgtlDG 650 (790)
+ + +|.|+..- +-...++++||+-...| | |++-+-+|.-|.+.|+|--|
T Consensus 236 ----~-~--~v~~~g~~--~~~~~~~~~ad~~v~~s--g----~~~~~EAma~G~Pvi~~~~~ 283 (364)
T 1f0k_A 236 ----Q-P--QHKVTEFI--DDMAAAYAWADVVVCRS--G----ALTVSEIAAAGLPALFVPFQ 283 (364)
T ss_dssp ----C-T--TSEEESCC--SCHHHHHHHCSEEEECC--C----HHHHHHHHHHTCCEEECCCC
T ss_pred ----C-C--ceEEecch--hhHHHHHHhCCEEEECC--c----hHHHHHHHHhCCCEEEeeCC
Confidence 1 1 47777643 33456778999988765 2 56667899999999999444
No 30
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=35.12 E-value=1.2e+02 Score=31.97 Aligned_cols=105 Identities=12% Similarity=0.062 Sum_probs=70.4
Q ss_pred ceecccccccccccccchhhhHHHHHHHHHhcChhhhhccccCeEEEEeecCCCCcHHHHHHHHHHHHHhhhhcCCcCCC
Q 003875 514 MFDIQVKRIHEYKRQLMNILGIVYRYKKMKEMSAVERKAKFVPRVCIFGGKAFATYVQAKRIVKFITDVGATVNHDPEIG 593 (790)
Q Consensus 514 lfdvq~kR~heYKRq~Lnil~ii~ry~~ik~~~~~~r~~~~~P~~~IFaGKA~P~y~~aK~iIk~I~~va~~vn~Dp~i~ 593 (790)
...+++=|+..+|.. +..+++.. ....+++.|.. | + ....+.
T Consensus 223 ~~i~~vGrl~~~Kg~----------~~~l~~~~--------~~~~l~ivG~g-~---------------~----~~~~l~ 264 (406)
T 2hy7_A 223 IHAVAVGSMLFDPEF----------FVVASKAF--------PQVTFHVIGSG-M---------------G----RHPGYG 264 (406)
T ss_dssp EEEEEECCTTBCHHH----------HHHHHHHC--------TTEEEEEESCS-S---------------C----CCTTCC
T ss_pred cEEEEEeccccccCH----------HHHHHHhC--------CCeEEEEEeCc-h---------------H----HhcCCC
Confidence 578889999999886 22233211 13578888853 2 1 122234
Q ss_pred CcceEEEecCCChhhhhhhccccccccccCCCccccCCCccchhh-------cccceEeeecccccchhcccccCcceee
Q 003875 594 DLLKVIFVPDYNVSVAELLIPASELSQHISTAGMEASGTSNMKFA-------MNGCILIGTLDGANVEIRQEVGEENFFL 666 (790)
Q Consensus 594 ~~lKVvFlenY~vslAe~lipa~Dls~~istag~EASGTsnMKfa-------mNG~l~lgtlDGa~vEi~e~~g~en~~~ 666 (790)
+ +|.|+.--.-+-...++.+||+....|+ .|..|..-+-+| .-|.+.|+| |. | . +.+++++
T Consensus 265 ~--~V~f~G~~~~~~l~~~~~~adv~v~ps~--~E~~~~~~lEAm~Kl~eYla~G~PVIas-~~--v--~---~~~~G~l 332 (406)
T 2hy7_A 265 D--NVIVYGEMKHAQTIGYIKHARFGIAPYA--SEQVPVYLADSSMKLLQYDFFGLPAVCP-NA--V--V---GPYKSRF 332 (406)
T ss_dssp T--TEEEECCCCHHHHHHHHHTCSEEECCBS--CSCCCTTHHHHCHHHHHHHHHTCCEEEE-GG--G--T---CSCSSEE
T ss_pred C--CEEEcCCCCHHHHHHHHHhcCEEEECCC--cccCchHHHHHHHHHHHHhhCCCcEEEe-hh--c--c---cCcceEE
Confidence 4 6899876544445567899999998776 588888888899 999999999 43 2 2 2356666
Q ss_pred -cc
Q 003875 667 -FG 668 (790)
Q Consensus 667 -fG 668 (790)
+-
T Consensus 333 ~v~ 335 (406)
T 2hy7_A 333 GYT 335 (406)
T ss_dssp EEC
T ss_pred EeC
Confidence 54
No 31
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=28.49 E-value=60 Score=30.23 Aligned_cols=37 Identities=27% Similarity=0.318 Sum_probs=31.7
Q ss_pred CCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHHccc
Q 003875 182 EKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 222 (790)
Q Consensus 182 ~~~~ihlNDtH---palai~ElmR~Lid~~gl~w~~Aw~it~~~ 222 (790)
.++.||..-|. +++++.-||+ .+|+++++|++.+++.
T Consensus 88 ~~VlVHC~~G~sRS~~vv~ayLm~----~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 88 EGVLIISGTGVNKAPAIVIAFLMY----YQRLSFINAFNKVQGL 127 (161)
T ss_dssp CEEEEEESSSSSHHHHHHHHHHHH----HTTCCHHHHHHHHHHH
T ss_pred CeEEEEcCCCCcHHHHHHHHHHHH----HhCCCHHHHHHHHHHH
Confidence 56889999998 7888888886 4699999999998865
No 32
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=26.67 E-value=69 Score=28.88 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=31.4
Q ss_pred CCCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHHccc
Q 003875 181 PEKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 222 (790)
Q Consensus 181 p~~~~ihlNDtH---palai~ElmR~Lid~~gl~w~~Aw~it~~~ 222 (790)
+.++.||..-|. +++++.-||+ ..|+++++|++.+++.
T Consensus 81 ~~~VlVHC~~G~sRS~~~v~ayLm~----~~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 81 DGVVLVHSNAGVSRAAAIVIGFLMN----SEQTSFTSAFSLVKNA 121 (144)
T ss_dssp TCCEEEECSSSSSHHHHHHHHHHHH----HHCCCHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCchHHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 357899999998 7888888876 4599999999988865
No 33
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=22.82 E-value=99 Score=27.65 Aligned_cols=38 Identities=21% Similarity=0.372 Sum_probs=31.0
Q ss_pred CCCceEEeCCCC---hhhhHHHHHHHHHHhcCCCHHHHHHHHccc
Q 003875 181 PEKVAVQMNDTH---PTLCIPELIRILIDLKGLSWKEAWNITQRT 222 (790)
Q Consensus 181 p~~~~ihlNDtH---palai~ElmR~Lid~~gl~w~~Aw~it~~~ 222 (790)
+.++.||..-|. +++++.-||+ ..|+++++|++.+++.
T Consensus 81 ~~~VlVHC~~G~~RS~~~~~aylm~----~~~~~~~~A~~~v~~~ 121 (144)
T 3ezz_A 81 RGRVLVHSQAGISRSATICLAYLMM----KKRVRLEEAFEFVKQR 121 (144)
T ss_dssp TCCEEEEESSSSSHHHHHHHHHHHH----HHTCCHHHHHHHHHTT
T ss_pred CCeEEEECCCCCChhHHHHHHHHHH----HcCCCHHHHHHHHHHH
Confidence 357899999998 6677777665 4699999999999876
No 34
>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A
Probab=21.44 E-value=2.9e+02 Score=28.36 Aligned_cols=68 Identities=13% Similarity=0.111 Sum_probs=40.8
Q ss_pred CeEEEEeecCCCCcHHH-HHHHHHHHHHhhhhcCCcCCCC---cceEEEecCCChhhhhhh------------------c
Q 003875 556 PRVCIFGGKAFATYVQA-KRIVKFITDVGATVNHDPEIGD---LLKVIFVPDYNVSVAELL------------------I 613 (790)
Q Consensus 556 P~~~IFaGKA~P~y~~a-K~iIk~I~~va~~vn~Dp~i~~---~lKVvFlenY~vslAe~l------------------i 613 (790)
|+++|.|| -|+.-..+ ..++.+|..+..-..+||.+.. ...+++||-.|..=.+.- .
T Consensus 58 p~v~i~ag-iHg~E~~g~~~~~~l~~~L~~~~~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wr~~R~~~~~~~~ 136 (309)
T 3d4u_A 58 NAMWIDCG-IHAREWISPAFCLWFVGSVTYYYGKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKKDRMWRKNRSLHEKNAC 136 (309)
T ss_dssp CEEEEECC-SSTTCTHHHHHHHHHHHHHHHSTTC-----CCSTTCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCTTCSS
T ss_pred ceEEEEec-cCCcchhhHHHHHHHHHHHHHhhccCHHHHHHHhcCeEEEEeeeccchhheeecccceeecCCCCCCCCCC
Confidence 76666665 56655554 4456677777765556786554 457899999887654432 4
Q ss_pred cccccccccCC
Q 003875 614 PASELSQHIST 624 (790)
Q Consensus 614 pa~Dls~~ist 624 (790)
.|+|+--|-|.
T Consensus 137 ~GvDLNRnf~~ 147 (309)
T 3d4u_A 137 VGTDLNRNFAS 147 (309)
T ss_dssp CCCCGGGCSCC
T ss_pred cCccccCCCCh
Confidence 56777776666
Done!