Query 003876
Match_columns 790
No_of_seqs 386 out of 2178
Neff 7.0
Searched_HMMs 29240
Date Mon Mar 25 06:56:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003876.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003876hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3abz_A Beta-glucosidase I; gly 100.0 1E-142 4E-147 1284.2 53.7 623 63-787 4-830 (845)
2 3zyz_A Beta-D-glucoside glucoh 100.0 4E-142 1E-146 1263.0 53.9 632 60-788 11-707 (713)
3 2x41_A Beta-glucosidase; hydro 100.0 5E-140 2E-144 1251.4 51.2 624 63-787 2-707 (721)
4 1x38_A Beta-D-glucan exohydrol 100.0 1E-111 5E-116 988.4 39.9 516 53-646 4-601 (602)
5 3rrx_A EXO-1,3/1,4-beta-glucan 100.0 2E-111 6E-116 1001.1 37.5 506 60-651 21-619 (822)
6 3bmx_A Uncharacterized lipopro 100.0 1.7E-98 6E-103 882.9 35.1 487 58-648 28-640 (642)
7 3sql_A Glycosyl hydrolase fami 100.0 1.7E-68 5.9E-73 607.9 27.0 402 91-588 82-523 (535)
8 3tev_A Glycosyl hyrolase, fami 100.0 5.9E-55 2E-59 476.1 19.3 239 90-386 70-339 (351)
9 4g6c_A Beta-hexosaminidase 1; 100.0 2.9E-48 9.8E-53 422.5 8.4 237 88-377 59-322 (348)
10 4gvf_A Beta-hexosaminidase; TI 100.0 5.4E-48 1.9E-52 420.0 8.3 209 92-353 54-271 (349)
11 2oxn_A Beta-hexosaminidase; TI 100.0 1E-47 3.4E-52 417.4 9.1 206 92-353 54-265 (340)
12 3idu_A Uncharacterized protein 96.0 0.021 7.1E-07 53.0 8.4 51 694-754 33-84 (127)
13 2l0d_A Cell surface protein; s 94.5 0.12 4E-06 47.0 8.3 51 694-754 19-71 (114)
14 2kut_A Uncharacterized protein 94.1 0.053 1.8E-06 49.8 5.2 55 694-753 16-72 (122)
15 3isy_A Bsupi, intracellular pr 91.1 0.81 2.8E-05 41.8 8.6 69 694-778 18-99 (120)
16 4ep8_B Urease subunit beta; al 89.7 0.55 1.9E-05 40.9 5.8 52 696-751 20-82 (101)
17 4ubp_B Protein (urease (chain 85.5 1.1 3.6E-05 40.7 5.3 52 696-751 26-88 (126)
18 4ac7_B Urease subunit beta; hy 85.5 1.1 3.6E-05 40.7 5.3 52 696-751 26-88 (126)
19 1w8o_A Bacterial sialidase; 3D 81.7 2.7 9.3E-05 48.3 8.4 52 694-755 373-426 (601)
20 1yew_A Particulate methane mon 73.2 7.4 0.00025 41.6 7.7 56 694-754 264-336 (382)
21 3qga_A UREA2, fusion of urease 72.6 3.5 0.00012 40.9 4.7 51 697-751 126-187 (225)
22 2e6j_A Hydin protein; PAPD, st 69.8 5.2 0.00018 35.1 5.0 69 694-769 26-94 (112)
23 2x3c_A Toxic extracellular end 69.0 6.3 0.00021 42.4 6.3 63 695-759 37-116 (343)
24 3fsa_A Azurin; copper, cupredo 67.4 5 0.00017 36.8 4.3 69 697-767 28-116 (125)
25 2ys4_A Hydrocephalus-inducing 66.5 6.9 0.00024 35.2 5.2 67 694-772 41-107 (122)
26 1cuo_A Protein (azurin ISO-2); 60.1 11 0.00037 34.6 5.2 25 739-763 86-113 (129)
27 1nwp_A Azurin; electron transp 60.1 14 0.00047 33.8 5.9 25 739-763 86-113 (128)
28 2ccw_A Azurin II, AZN-2; elect 60.0 12 0.00041 34.3 5.5 25 739-763 86-113 (129)
29 2iaa_C Azurin; quinoprotein, t 59.9 13 0.00043 34.1 5.7 25 739-763 85-112 (128)
30 1xf1_A C5A peptidase, SCP; hyd 58.7 8.5 0.00029 47.0 5.5 60 694-754 499-564 (926)
31 1e9y_A Urease subunit alpha; h 57.1 8.2 0.00028 38.6 4.0 52 697-752 126-188 (238)
32 3rfr_A PMOB; membrane, oxidore 56.3 21 0.00071 38.6 7.2 56 694-754 298-368 (419)
33 3kmh_A D-lyxose isomerase; cup 54.5 11 0.00036 38.3 4.4 48 701-754 130-186 (246)
34 3qbt_B Inositol polyphosphate 53.9 32 0.0011 31.7 7.5 55 695-754 44-100 (140)
35 2qsv_A Uncharacterized protein 42.8 38 0.0013 33.6 6.5 52 694-754 134-185 (220)
36 4dzg_A PLIG; lysozyme inhibito 41.1 28 0.00096 31.1 4.6 16 766-781 77-95 (114)
37 3qis_A Inositol polyphosphate 39.1 55 0.0019 35.2 7.5 56 695-755 47-104 (366)
38 3ay2_A Lipid modified azurin p 36.7 31 0.0011 33.0 4.5 24 739-763 125-151 (167)
39 2x0j_A Malate dehydrogenase; o 34.7 11 0.00038 39.6 1.0 57 495-556 66-124 (294)
40 3vku_A L-LDH, L-lactate dehydr 34.3 21 0.00073 38.0 3.1 58 494-556 72-131 (326)
41 3ldh_A Lactate dehydrogenase; 32.7 25 0.00087 37.5 3.4 56 496-556 87-144 (330)
42 5mdh_A Malate dehydrogenase; o 31.8 24 0.00084 37.5 3.1 58 494-556 75-135 (333)
43 3dnf_A ISPH, LYTB, 4-hydroxy-3 31.3 2.5E+02 0.0084 29.3 10.5 138 400-574 125-266 (297)
44 1oju_A MDH, malate dehydrogena 31.2 13 0.00045 38.9 0.9 58 494-556 65-124 (294)
45 4djm_A DRAB; chaperone, PILI; 30.9 92 0.0032 31.5 7.1 52 697-753 39-91 (239)
46 4h7p_A Malate dehydrogenase; s 30.0 15 0.00051 39.5 1.0 56 494-555 96-155 (345)
47 3q48_A Chaperone CUPB2; IG fol 29.8 1.2E+02 0.004 31.1 7.7 54 697-753 45-102 (257)
48 4gy7_A Urease; JACK bean, hydr 29.2 44 0.0015 40.3 5.0 52 695-751 150-213 (840)
49 3tl2_A Malate dehydrogenase; c 29.0 16 0.00056 38.6 1.1 58 494-556 74-133 (315)
50 1exg_A EXO-1,4-beta-D-glycanas 28.7 80 0.0027 27.8 5.5 59 693-753 18-89 (110)
51 3pqe_A L-LDH, L-lactate dehydr 28.4 16 0.00055 38.9 0.9 58 494-556 69-128 (326)
52 3nep_X Malate dehydrogenase; h 27.1 17 0.00057 38.5 0.8 58 494-556 65-124 (314)
53 4aj2_A L-lactate dehydrogenase 27.1 22 0.00075 37.9 1.7 57 495-556 84-142 (331)
54 3hhp_A Malate dehydrogenase; M 26.4 21 0.00072 37.7 1.4 58 494-556 65-124 (312)
55 4ay0_A Chaperone protein CAF1M 26.3 1.3E+02 0.0043 30.0 7.1 52 697-753 29-83 (218)
56 3fi9_A Malate dehydrogenase; s 25.3 14 0.00048 39.7 -0.2 58 494-555 72-131 (343)
57 3gvi_A Malate dehydrogenase; N 25.3 24 0.00083 37.4 1.6 58 494-556 71-130 (324)
58 7mdh_A Protein (malate dehydro 25.1 25 0.00087 38.1 1.8 57 494-556 104-164 (375)
59 2co7_B SAFB chaperone, putativ 24.4 1.6E+02 0.0053 29.3 7.4 52 697-753 29-81 (221)
60 3hrz_B Cobra venom factor; ser 24.0 96 0.0033 31.4 5.8 59 694-755 96-155 (252)
61 4hs4_A Chromate reductase; tri 23.2 1.3E+02 0.0046 29.0 6.6 55 487-552 62-121 (199)
62 2aan_A Auracyanin A; cupredoxi 22.8 1.1E+02 0.0037 27.6 5.5 17 737-753 98-114 (139)
63 1mld_A Malate dehydrogenase; o 20.7 51 0.0017 34.6 3.0 58 494-556 64-123 (314)
64 3p7m_A Malate dehydrogenase; p 20.3 30 0.001 36.6 1.1 58 494-556 69-128 (321)
65 1eiw_A Hypothetical protein MT 20.0 90 0.0031 27.7 4.0 77 494-591 34-110 (111)
No 1
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=100.00 E-value=1.1e-142 Score=1284.20 Aligned_cols=623 Identities=27% Similarity=0.436 Sum_probs=535.4
Q ss_pred HHHHHHHhcCCHHHHHHhhcC----CCCCcccCCCCchhhhhccccceecCCCCccccCCCCccccCchhhhhhhcCCHH
Q 003876 63 TRAKSLISLLTLQEKIQQLSD----NASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRS 138 (790)
Q Consensus 63 ~r~~~ll~~mtleEKv~ql~~----~~~~i~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~ 138 (790)
.|+++||++||||||++||.+ ...+++|+|||.+ +++|++||+. +.++.+ ...+|.||+++++|||||++
T Consensus 4 ~r~~~ll~~mTleEKi~~l~g~~~~~~~~~~rlgiP~l-~~~D~~~G~~----~~~~~~-~~~~t~fP~~~~laat~d~~ 77 (845)
T 3abz_A 4 FDVEQLLSELNQDEKISLLSAVDFWHTKKIERLGIPAV-RVSDGPNGIR----GTKFFD-GVPSGCFPNGTGLASTFDRD 77 (845)
T ss_dssp CCHHHHHHHCCHHHHHHHTBCSSSSBCCCBGGGTBCCC-BEEECTTSCC----CSCSTT-CCCBCCCCCHHHHHHTCCHH
T ss_pred HHHHHHHHcCCHHHHHHHhcCCCccccccCcccCCCCE-EEEecCCCee----eeeccC-CCCcCcCcCHHHHHhcCCHH
Confidence 579999999999999999986 4678999999999 6899999986 222221 12489999999999999999
Q ss_pred HHHHHHHHHHHHHHHhhccCCCcceeeCceecccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCCccc
Q 003876 139 LWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGF 218 (790)
Q Consensus 139 l~~~~g~~~g~E~ra~~~~G~~g~~~laP~~di~r~p~~gr~~esfgeDp~l~~~~~~a~v~GlQ~~~~~~~~~~~~~~~ 218 (790)
|++++|+++|+|+|++ |+ +++ |||++||.|||+|||++|||||||+|+++|+.|+|+|||++
T Consensus 78 l~~~~g~~~g~E~ra~---Gi-~~~-laP~vdi~r~P~~gR~~EsfgeDP~lv~~~a~a~v~GlQ~~------------- 139 (845)
T 3abz_A 78 LLETAGKLMAKESIAK---NA-AVI-LGPTTNMQRGPLGGRGFESFSEDPYLAGMATSSVVKGMQGE------------- 139 (845)
T ss_dssp HHHHHHHHHHHHHHHT---TC-SEE-ECCBCCCCSSTTCTTGGGSCCSSHHHHHHHHHHHHHHHHHT-------------
T ss_pred HHHHHHHHHHHHHHHc---CC-CEE-ecceECCCcCCCCCcccccCCCCHHHHHHHHHHHHHHHhhC-------------
Confidence 9999999999999999 66 444 69999999999999999999999999999999999999998
Q ss_pred ccceeeccCCCCCCCCCccceeeeecccccCCccccCCCccceeccccChhhhhhccChhHHHHHH-hCCCceeeeeccc
Q 003876 219 REKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIE-QGKASCIMCSYNQ 297 (790)
Q Consensus 219 ~~~~~~~~~~~~~~~g~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~-~g~~~~vM~sy~~ 297 (790)
| |++|+|||||||++ ++|+..++.+++++|+|+||+||+++|+ +|+. +||||||+
T Consensus 140 ---------------g----V~a~~KHFpg~g~e----~~r~~~~~~v~~~~L~e~~L~PF~~ai~~ag~~-~VM~syn~ 195 (845)
T 3abz_A 140 ---------------G----IAATVKHFVCNDLE----DQRFSSNSIVSERALREIYLEPFRLAVKHANPV-CIMTAYNK 195 (845)
T ss_dssp ---------------T----CBCEEEEETTCCCC----TTTTTCEEECCHHHHHHTTSHHHHHHHHHHCCS-EEEECSSE
T ss_pred ---------------C----eeEEeeccccCCcc----cCCccccCCCCHHHHHHhhHHHHHHHHHhcCCC-EEEecCCC
Confidence 6 99999999999965 3566677889999999999999999997 6655 99999999
Q ss_pred cCCcccccCHHHHHH-HHHHhCCCcEEEccchHHHHhhh-------ccccCC---CHHHHHHHHHHHhcCC-CcHHHHHH
Q 003876 298 VNGVPACLRGDLFQK-ARNEWGFKGYITSDCDAVATIFE-------YQNYTK---THEDSAAGVLKADKGK-VQEKDIDR 365 (790)
Q Consensus 298 vng~pa~~s~~ll~~-LR~e~gF~G~VvSD~~~~~~~~~-------~~~~~~---~~~~a~~~al~A~~g~-i~~~~id~ 365 (790)
+||+|||+|++||++ ||+||||+|+|||||++|..... ...... ...+.+..|+ ++|+ |++++||+
T Consensus 196 ing~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~Al~AG~D~~m~~~~~~~~~~~l~~av--~~G~~i~~~~id~ 273 (845)
T 3abz_A 196 VNGEHCSQSKKLLIDILRDEWKWDGMLMSDWFGTYTTAAAIKNGLDIEFPGPTRWRTRALVSHSL--NSREQITTEDVDD 273 (845)
T ss_dssp ETTEEGGGCHHHHTCCCCCCTCCCSEEECCTTCCCCSHHHHHHTCCBBCSSSCSSCCHHHHHHHH--HTTCSCCHHHHHH
T ss_pred cCCEeccCCHHHHHHHHhhccCCCeEEEcccccHHHHHHHHHcCCCcccCCchhhhHHHHHHHHH--HcCccchHHHHHH
Confidence 999999999999999 99999999999999997653221 100011 1123566666 8999 99999999
Q ss_pred HHHHHHHHHHHhc----ccCCCCCCCCCCCCCCCccCcHHHHHHHHHHHHhhhhhhccCCCcccCCCCCCCeEEEEccCc
Q 003876 366 ALLNLFSVQLRLG----LFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLV 441 (790)
Q Consensus 366 av~Ril~~k~~~G----lf~~~p~~~~~~~~~~~~v~~~~h~~lA~e~A~esiVLLKN~~~~LPL~~~~~~kIaViGp~a 441 (790)
||+|||++|+++| +|+ +|+.. .....+++++|+++|+++|++|||||||++++|||++ .+||+||||+|
T Consensus 274 av~RIL~~k~~~g~l~~~~~-~p~~~----~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~--~~~iaviGp~A 346 (845)
T 3abz_A 274 RVRQVLKMIKFVVDNLEKTG-IVENG----PESTSNNTKETSDLLRKIAADSIVLLKNKNNILPLKK--EDNIIVIGPNA 346 (845)
T ss_dssp HHHHHHHHHHHHHHTHHHHC-CCTTC----CCCCTTCSHHHHHHHHHHHHHHCEEEEECTTCCSCCT--TSCEEEESTTT
T ss_pred HHHHHHHHHHHhCCcccccc-CCccC----ccccccCCHHHHHHHHHHHHhCcEEeccCCcccCCCC--CCEEEEEcCCc
Confidence 9999999999999 998 55321 1123478999999999999999999999999999986 36999999999
Q ss_pred ccccccCCCccC-CCCCcCcHHHHHHhhhc-ceeEeccCCCC------------------------------------C-
Q 003876 442 NNISQMGGGYTG-IPCSPKSLLRGLEAYVS-KTHYASGCHDV------------------------------------P- 482 (790)
Q Consensus 442 ~~~~~~~G~~~g-~~~~~~t~~egL~~~~~-~~~y~~g~~~~------------------------------------~- 482 (790)
+....++|+|+. .+.+.+||++||++++. .+.|..||... .
T Consensus 347 ~~~~~~Gggs~~~~~~~~vtpl~gi~~~~~~~v~y~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~G~~~~~~~~~~~~~~ 426 (845)
T 3abz_A 347 KAKTSSGGGSASMNSYYVVSPYEGIVNKLGKEVDYTVGAYSHKSIGGLAESSLIDAAKPADAENSGLIAKFYSNPVEERS 426 (845)
T ss_dssp SCCCCSCBSTTCCCBSCCCCHHHHHHHHHTSCCEEECCCCCCSSCCBSGGGEESSTTSCSCTTTBSEEEEEESSCTTTSC
T ss_pred chhhccCCCccCcccCCcCCHHHHHHHhhcCceeeccccccccccccccccccccccccccCCCCceEEEEeccCcccCc
Confidence 988776666654 46778999999998764 36666665310 0
Q ss_pred -------------------------------C------------------------------------------------
Q 003876 483 -------------------------------C------------------------------------------------ 483 (790)
Q Consensus 483 -------------------------------~------------------------------------------------ 483 (790)
.
T Consensus 427 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~l~idg~~v~~~~~~~~~~~~ 506 (845)
T 3abz_A 427 DDEEPFHVTKVNRSNVHLFDFKHEKVDPKNPYFFVTLTGQYVPQEDGDYIFSLQVYGSGLFYLNDELIIDQKHNQERGSF 506 (845)
T ss_dssp TTCCCSEEEEECSSEEECTTCCCTTSBTTBCCCEEEEEEEECCSSSEEEEEEEEEESEEEEEETTEEEEEESSSCCBCST
T ss_pred ccccceeeeeccccceeecccccccccccccceeEEEEEEEecCCCccEEEEEeecCceEEEECCEEEeecccccccccc
Confidence 0
Q ss_pred ---------------------------------------------------CC-chhHHHHHHHhhcCCEEEEEEecCCC
Q 003876 484 ---------------------------------------------------NS-DAGFHEAVRIAKKADFVIVVAGLDLT 511 (790)
Q Consensus 484 ---------------------------------------------------~~-~~~~~~a~~~a~~aDvvIv~vG~~~~ 511 (790)
.+ ...+++|+++|++||+||||+|.+..
T Consensus 507 ~~~~~~~~~~~~~~l~~g~~y~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Av~~A~~ADvvVv~vG~~~~ 586 (845)
T 3abz_A 507 CFGAGTKERTKKLTLKKGQVYNVRVEYGSGPTSGLVGEFGAGGFQAGVIKAIDDDEEIRNAAELAAKHDKAVLIIGLNGE 586 (845)
T ss_dssp TTTTSBCCEEEEEEECTTCCEEEEEEEECTTTSCCSSCCCCCEEEEEEEECCCHHHHHHHHHHHHHTSSEEEEEEECCTT
T ss_pred ccccCcccceeEEEecCCceeeEEEEeccCCcccccccccccceeecccccccchhhHHHHHHHHhcCCEEEEEEecCCc
Confidence 00 13478899999999999999999999
Q ss_pred CccccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEEeCCCcccccccccccCccEEEEccCCChhHHHHHHHHHhCCCCC
Q 003876 512 QETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNP 591 (790)
Q Consensus 512 ~e~Eg~Dr~~l~Lp~~q~~LI~~va~~~~~~vVVVl~~g~P~~l~~~~~~~~v~AiL~a~~pGqe~g~AiAdVL~G~~nP 591 (790)
.++||.||.+|.||+.|++||++|+++ ++|||||+++|+|++|+|++ +++|||++||||||+|+||||||||++||
T Consensus 587 ~e~Eg~DR~~l~LP~~Q~~LI~aV~a~-~~~tVVVl~sG~pv~m~w~~---~v~AIL~aw~pGqegG~AiAdVLfG~vNP 662 (845)
T 3abz_A 587 WETEGYDRENMDLPKRTNELVRAVLKA-NPNTVIVNQSGTPVEFPWLE---DANALVQAWYGGNELGNAIADVLYGDVVP 662 (845)
T ss_dssp TSBTTBCCSSSCCCTTHHHHHHHHHHH-CSCEEEEEECSSCCCCTTGG---GCSEEEECCCCCTTHHHHHHHHHTTSSCC
T ss_pred cccccCCcccccCCHHHHHHHHHHHHh-CCCEEEEEeCCCcccCcchh---ccCeEEEcCCCcHHHHHHHHHHhcCCcCC
Confidence 999999999999999999999999999 89999999999999999884 79999999999999999999999999999
Q ss_pred CccCCceeCCCCCCCCCCCCCCcccC-----CCCCCCCCcccccC---CCcccccCCccCCCCceec--cCCCccccccc
Q 003876 592 GGRLPMTWYPESFTKVPMNDMNMRAD-----SSRQYPGRSYRFYT---GTQVYGFGHGLSYTNYSYK--FLSAPSELTIS 661 (790)
Q Consensus 592 SGkLPvT~~p~~~~~~p~~~~~~~~~-----~~~~~~g~~Yr~~~---~~~~ypFG~GLSYTtF~ys--~l~~~~~~~~~ 661 (790)
|||||+|| |++++|+|.++...... .++.| .+||||+ .+|+||||||||||||+|| +++ +
T Consensus 663 SGkLP~T~-p~~~~d~P~~~~~~~~~g~~~y~eg~~--vgYR~y~~~~~~plfPFG~GLSYTtF~ys~~~l~------v- 732 (845)
T 3abz_A 663 NGKLSLSW-PFKLQDNPAFLNFKTEFGRVIYGEDIF--VGYRYYEKLQRKVAFPFGYGLSYTTFELDISDFK------V- 732 (845)
T ss_dssp CCCCSSCB-CSSGGGSTTTTSCSCBTTEEECTTTTC--CTHHHHHHHTCCCSBCTTCCBCSSCEEEEEEEEE------E-
T ss_pred CCCCceee-eCchhhCCccccCCCCCCceeccCCcc--CCCcchhcCCCceeecccCCCcceeEEEeccccc------c-
Confidence 99999997 88899999764321100 12233 3699997 5799999999999999999 887 1
Q ss_pred cccccCCCcccccccCCCCcccccccccccccceEEEEEEEEecC-CCCCceEEEEEEecCCCCCCcccccccccccccc
Q 003876 662 ASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAG-DVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHT 740 (790)
Q Consensus 662 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vsv~VtNtG-~~~G~eVvQlY~~~p~~~~~~P~k~L~gF~kv~L 740 (790)
+ ++.++|+|+||||| +++|+||||||+++|.+++.+|.||||||+||+|
T Consensus 733 ----~--------------------------~~~~~v~v~V~NtG~~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~L 782 (845)
T 3abz_A 733 ----T--------------------------DDKIAISVDVKNTGDKFAGSEVVQVYFSALNSKVSRPVKELKGFEKVHL 782 (845)
T ss_dssp ----C--------------------------SSEEEEEEEEEECCSSCCEEEEEEEEEEESSCSSCCCSCEEEEEEEEEE
T ss_pred ----c--------------------------CCeEEEEEEEEECCcCCCcceeeeeeEeCCCCCcchhhheeccceeEEE
Confidence 0 04689999999999 9999999999999999988999999999999999
Q ss_pred CCCCEEEEEEEec-CCCCceEEeCC-CcEEecCceEEEEEecCCceEEE
Q 003876 741 VAKGSKEISFGVD-PCEQLSIANKH-GRRILPLGNHVLMVGELRHSLTI 787 (790)
Q Consensus 741 ~pGes~~V~~~l~-~~~~ls~~d~~-~~~~~~~G~y~i~vG~~s~~~~~ 787 (790)
+||||++|+|+|+ . ++|++||+. ++|++|+|+|+|+||.||+++.+
T Consensus 783 ~pGes~~V~~~l~~~-~~l~~~d~~~~~~~~e~G~y~v~vG~ss~di~l 830 (845)
T 3abz_A 783 EPGEKKTVNIDLELK-DAISYFNEELGKWHVEAGEYLVSVGTSSDDILS 830 (845)
T ss_dssp CTTCEEEEEEEEEHH-HHHCEEETTTTEEEECSEEEEEEEESSTTCEEE
T ss_pred CCCCEEEEEEEeCCh-HHeeEEecCCCeEEEcCCEEEEEEECCCCCcee
Confidence 9999999999999 7 689999996 78999999999999999998754
No 2
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=100.00 E-value=3.6e-142 Score=1262.95 Aligned_cols=632 Identities=24% Similarity=0.356 Sum_probs=525.5
Q ss_pred CHHHHHHHHHhcCCHHHHHHhhcC----------CCCCcccCCCCchhhhhccccceecCCCCccccCCCCccccCchhh
Q 003876 60 SISTRAKSLISLLTLQEKIQQLSD----------NASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVL 129 (790)
Q Consensus 60 ~~~~r~~~ll~~mtleEKv~ql~~----------~~~~i~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~ 129 (790)
..++|+++||++||||||++||.+ .+++|+|||||.+ ++.|++||++.. ..+|.||+++
T Consensus 11 ~a~~ra~~l~~~lTl~EK~~l~~g~~~~~~~~~~~~~~i~rlgiP~~-~~~Dg~~G~r~~----------~~~T~fP~~~ 79 (713)
T 3zyz_A 11 TAYDKAKAALAKLNLQDKVGIVSGVGWNGGPCVGNTSPASKISYPSL-CLQDGPLGVRYS----------TGSTAFTPGV 79 (713)
T ss_dssp HHHHHHHHHHTTCCHHHHHHHHBBCCTTCSSSSEEBCCBGGGTBCCC-EEECCTTSCTTC----------SSCCCCCCHH
T ss_pred hHHHHHHHHHHhCCHHHHHHHhcCCCcccCccccccCCcCCCCCceE-EEEecCceEECC----------CCCCcCcCHH
Confidence 378999999999999999999975 3678999999999 578999987531 2589999999
Q ss_pred hhhhcCCHHHHHHHHHHHHHHHHHhhccCCCcceeeCceec-ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCC
Q 003876 130 VSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNIN-IFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWK 208 (790)
Q Consensus 130 ~laat~d~~l~~~~g~~~g~E~ra~~~~G~~g~~~laP~~d-i~r~p~~gr~~esfgeDp~l~~~~~~a~v~GlQ~~~~~ 208 (790)
++|||||++|++++|+++|+|+|++ |+ +++ |+|++| |.|||+|||++|||||||+|+++|+.|+|+|||++
T Consensus 80 ~laat~d~~l~~~~g~~~g~E~ra~---Gi-~~~-laP~vd~v~r~P~~gR~~e~fgeDP~l~~~~a~a~v~Glq~~--- 151 (713)
T 3zyz_A 80 QAASTWDVNLIRERGQFIGEEVKAS---GI-HVI-LGPVAGPLGKTPQGGRNWEGFGVDPYLTGIAMGQTINGIQSV--- 151 (713)
T ss_dssp HHHHHTCHHHHHHHHHHHHHHHHHT---TC-SEE-CCCBCSSCCCSTTCTTGGGTTCSCHHHHHHHHHHHHHHHHHT---
T ss_pred HHHhcCCHHHHHHHHHHHHHHHHhc---CC-CEE-ECCeecccCCCCCCCcccccccCCHHHHHHHHHHHHHHHhhC---
Confidence 9999999999999999999999999 66 444 599999 88999999999999999999999999999999998
Q ss_pred CCCCCCCcccccceeeccCCCCCCCCCccceeeeecccccCCccccCCCccceeccccChhhhhhccChhHHHHHHhCCC
Q 003876 209 SDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKA 288 (790)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~~g~~ 288 (790)
| |++|+|||||||++. +|...++++++++|+|+||+||+++|++|+.
T Consensus 152 -------------------------g----V~a~~KHF~g~g~e~----~r~~~~~~v~~~~l~e~~l~pF~~ai~ag~~ 198 (713)
T 3zyz_A 152 -------------------------G----VQATAKHYILNEQEL----NRETISSNPDDRTLHELYTWPFADAVQANVA 198 (713)
T ss_dssp -------------------------T----CEEEEEEETTCCCST----TTTTCEECCCHHHHHHTTTHHHHHHHHTTCS
T ss_pred -------------------------C----eEEEEecCccCCccc----cCccccCcCCHHHHHHhhhHHHHHHHHcCCC
Confidence 6 999999999999764 4555678899999999999999999998876
Q ss_pred ceeeeeccccCCcccccCHHHHHH-HHHHhCCCcEEEccchHHHHhh-------hccccCC-------CHHHHHHHHHHH
Q 003876 289 SCIMCSYNQVNGVPACLRGDLFQK-ARNEWGFKGYITSDCDAVATIF-------EYQNYTK-------THEDSAAGVLKA 353 (790)
Q Consensus 289 ~~vM~sy~~vng~pa~~s~~ll~~-LR~e~gF~G~VvSD~~~~~~~~-------~~~~~~~-------~~~~a~~~al~A 353 (790)
+||||||++||+|+|+|+++|++ ||+||||+|+|||||+++.... +...... ...+....|+
T Consensus 199 -~VM~syn~vng~pa~~s~~ll~~iLR~e~GF~G~VvSD~~a~~~~~~ai~AG~D~~m~~~~~~~~~~~~~~~l~~av-- 275 (713)
T 3zyz_A 199 -SVMCSYNKVNTTWACEDQYTLQTVLKDQLGFPGYVMTDWNAQHTTVQSANSGLDMSMPGTDFNGNNRLWGPALTNAV-- 275 (713)
T ss_dssp -EEEECSSEETTEEGGGCHHHHCCCCCCCSCCCSEEEESTTCCCCSHHHHHHTCCBBSSSSCTTSCCCCSTHHHHHHH--
T ss_pred -eEEeeccccCCccCcCCHHHHHHHHHHHcCCCEEEEecCccHHHHHHHHHcCCCEeCCCCcccchhHHHHHHHHHHH--
Confidence 99999999999999999999999 9999999999999999754321 1000011 1125566666
Q ss_pred hcCCCcHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccCcHHHHHHHHHHHHhhhhhhccCCCcccCCCCCCCe
Q 003876 354 DKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSS 433 (790)
Q Consensus 354 ~~g~i~~~~id~av~Ril~~k~~~Glf~~~p~~~~~~~~~~~~v~~~~h~~lA~e~A~esiVLLKN~~~~LPL~~~~~~k 433 (790)
++|+|++++||+||+|||++|+++|+|+ +++. .... ....+++|+++||++|++|||||||++++|||++. +|
T Consensus 276 ~~G~i~~~~id~av~RIL~~k~~lg~~~-~~~~--~~~~--~~~~~~~h~~la~~~a~~sivLLKN~~~~LPL~~~--~~ 348 (713)
T 3zyz_A 276 NSNQVPTSRVDDMVTRILAAWYLTGQDQ-AGYP--SFNI--SRNVQGNHKTNVRAIARDGIVLLKNDANILPLKKP--AS 348 (713)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHTTTTS-TTCC--CCCT--TSCCCTTTHHHHHHHHHHTCEEEEEGGGCCSCCCC--SE
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHhCCcc-cCCC--Cccc--ccccCHHHHHHHHHhhhcceEEEccCCCccccCCC--CE
Confidence 8999999999999999999999999997 3331 1111 12247899999999999999999999999999864 79
Q ss_pred EEEEccCccccc-----------------ccCCCccC--CCCCcCcHHHHHHhhhcc----eeEeccCCCCCCCCchhHH
Q 003876 434 LAIIGPLVNNIS-----------------QMGGGYTG--IPCSPKSLLRGLEAYVSK----THYASGCHDVPCNSDAGFH 490 (790)
Q Consensus 434 IaViGp~a~~~~-----------------~~~G~~~g--~~~~~~t~~egL~~~~~~----~~y~~g~~~~~~~~~~~~~ 490 (790)
|+||||+|+... ...|++++ .+++.+||+++|++++.. +.+.. ...++
T Consensus 349 IaViG~~A~~~~~G~~~~~~~~~~~~~~~~~~g~gs~~~~~~~~~t~~~~i~~~~~~~g~~v~~~~---------~~~~~ 419 (713)
T 3zyz_A 349 IAVVGSAAIIGNHARNSPSCNDKGCDDGALGMGWGSGAVNYPYFVAPYDAINTRASSQGTQVTLSN---------TDNTS 419 (713)
T ss_dssp EEEESGGGSCCTTTTTCTTSGGGCCCCSSCCCCBSTTCCCCSCCCCHHHHHHHHHHTTTCEEEEEC---------SCCHH
T ss_pred EEEECCCccccccccccccccccccccCceecccCCCCcCcCCCCCHHHHHHHHhccCCeEEEEeC---------CccHH
Confidence 999999997421 11233343 466789999999987632 22221 23578
Q ss_pred HHHHHhhcCCEEEEEEecCCCCccccC--------CCCCCCCCHHHHHHHHHHHHhCCCCEEEEEeCCCcccc-cccccc
Q 003876 491 EAVRIAKKADFVIVVAGLDLTQETEDR--------DRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDV-SFAEAD 561 (790)
Q Consensus 491 ~a~~~a~~aDvvIv~vG~~~~~e~Eg~--------Dr~~l~Lp~~q~~LI~~va~~~~~~vVVVl~~g~P~~l-~~~~~~ 561 (790)
+|+++|+++|+|||++|.. ++||. ||.+|.||+.|++||++|+++ ++|||||+++|+|++| +|+ +.
T Consensus 420 ~a~~~A~~aDv~Iv~vg~~---~gEg~~~~~g~~gDR~~l~Lp~~Q~~Li~~v~~~-~~~~VVVl~sG~p~~~~~w~-~~ 494 (713)
T 3zyz_A 420 SGASAARGKDVAIVFITAD---SGEGYITVEGNAGDRNNLDPWHNGNALVQAVAGA-NSNVIVVVHSVGAIILEQIL-AL 494 (713)
T ss_dssp HHHHHHTTCSEEEEEEEEC---CBCTTCCBTTBCSSCSCSSCSTTHHHHHHHHHHH-CSCEEEEEEESSCCCCHHHH-TC
T ss_pred HHHHHhhcCCEEEEEeccc---CCCCccccccCCCCcccccCChhHHHHHHHHHHh-CCCeEEEEecCCcccchhhh-hc
Confidence 9999999999999999964 56666 999999999999999999999 8999999999999999 665 45
Q ss_pred cCccEEEEccCCChhHHHHHHHHHhCCCCCCccCCceeCCCCCCCCCCCCCCcccCCCCCCCC---CcccccCC---Ccc
Q 003876 562 SQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPG---RSYRFYTG---TQV 635 (790)
Q Consensus 562 ~~v~AiL~a~~pGqe~g~AiAdVL~G~~nPSGkLPvT~~p~~~~~~p~~~~~~~~~~~~~~~g---~~Yr~~~~---~~~ 635 (790)
++++|||++|||||++|+||||||||++|||||||+|| |++.+|+|.+.. +.+ ...|.+ ++|||||. +|+
T Consensus 495 ~~v~Ail~aw~pGqegG~AiAdvL~G~~nPSGkLP~T~-p~~~~d~p~~~~-~~~--~~~y~eg~~vgYRy~d~~~~~pl 570 (713)
T 3zyz_A 495 PQVKAVVWAGLPSQESGNALVDVLWGDVSPSGKLVYTI-AKSPNDYNTRIV-SGG--SDSFSEGLFIDYKHFDDANITPR 570 (713)
T ss_dssp TTEEEEEECCCCGGGHHHHHHHHHTTSSCCCCCCSSCB-CSCGGGSSCCCC-CSS--EECCTTTTCCHHHHHHHTTCCCS
T ss_pred cccCEEEEcCCCCchhhheehhhhcCCcCCCccCccee-cCChhhCCCccc-cCC--ccccCCCCccCceeccCCCCcee
Confidence 78999999999999999999999999999999999997 888888885421 111 112332 47999986 789
Q ss_pred cccCCccCCCCceeccCCCccccccccccccCCCcccccccCCCCcccccccccccccceEEEEEEEEecCCCCCceEEE
Q 003876 636 YGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQISVTNAGDVDGSHVVM 715 (790)
Q Consensus 636 ypFG~GLSYTtF~ys~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vsv~VtNtG~~~G~eVvQ 715 (790)
||||||||||||+|++++++... +.. . . ... .......+|+++.++|+|+|||||+++|+||||
T Consensus 571 ypFG~GLSYTtF~ys~l~~~~~~------~~~-----~-~---~~~-~~~gg~~~~~~~~~~vsv~VtNtG~~~G~EVvQ 634 (713)
T 3zyz_A 571 YEFGYGLSYTKFNYSRLSVLSTA------KSG-----P-A---TGA-VVPGGPSDLFQNVATVTVDIANSGQVTGAEVAQ 634 (713)
T ss_dssp BCTTCCBCSSCEEEEEEEEEECC------CCE-----E-C---CSC-EETTEETTTTSEEEEEEEEEEECSSSCEEEEEE
T ss_pred ecCCCCCCcccEEEeeeEecccc------ccC-----c-c---ccc-ccccccccccCCeEEEEEEEEeCCCCccceeee
Confidence 99999999999999999843210 000 0 0 000 000001223446899999999999999999999
Q ss_pred EEEecCCCCCCccccccccccccccCCCCEEEEEEEecCCCCceEEeCC-CcEEecCceEEEEEecCCceEEEE
Q 003876 716 LFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKH-GRRILPLGNHVLMVGELRHSLTIE 788 (790)
Q Consensus 716 lY~~~p~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~-~~~~~~~G~y~i~vG~~s~~~~~~ 788 (790)
||+++|.+++.+|.||||||+||+|+||||++|+|+|+. ++|++||+. ++|++|+|+|+|+||.||+++.++
T Consensus 635 lYv~~~~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~-~~ls~~d~~~~~w~ve~G~y~v~vG~sS~d~~l~ 707 (713)
T 3zyz_A 635 LYITYPSSAPRTPPKQLRGFAKLNLTPGQSGTATFNIRR-RDLSYWDTASQKWVVPSGSFGISVGASSRDIRLT 707 (713)
T ss_dssp EEEECCTTSSSCCSCEEEEEEEEEECTTCEEEEEEEEEG-GGGCEEETTTTEEEECCEEEEEEEESSSSCEEEE
T ss_pred eeeecCCCCCCchhHHhhhcccceeCCCCeEEEEEEEcH-HHeeeeecCCCeEEEcCceEEEEEECCCCCccee
Confidence 999999999899999999999999999999999999998 689999985 789999999999999999997653
No 3
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=100.00 E-value=4.7e-140 Score=1251.44 Aligned_cols=624 Identities=28% Similarity=0.481 Sum_probs=525.1
Q ss_pred HHHHHHHhcCCHHHHHHhhcC-------------------CCCCcccCCCCchhhhhccccceecCCCCccccCCCCccc
Q 003876 63 TRAKSLISLLTLQEKIQQLSD-------------------NASAIPRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVT 123 (790)
Q Consensus 63 ~r~~~ll~~mtleEKv~ql~~-------------------~~~~i~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t 123 (790)
+|+++||++||||||++||.+ .+.+++|+|||.+ +++|++||+... .+..+.....++|
T Consensus 2 ~r~~~ll~~mTleEK~~~l~g~~~~~~~g~~~~~~~g~~g~~~~v~rlgiP~~-~~~D~~~G~~~~-~~~~~~~~~~~~t 79 (721)
T 2x41_A 2 EKVNEILSQLTLEEKVKLVVGVGLPGLFGNPHSRVAGAAGETHPVPRVGLPAF-VLADGPAGLRIN-PTRENDENTYYTT 79 (721)
T ss_dssp CHHHHHHHHCCHHHHHHHTBCCCSTTSTTCCCCSSTTCSEECCCBGGGTBCCC-EEECCTTSCCCC-SCCTTCCCCCCCC
T ss_pred hhHHHHHHcCCHHHHHHHhcCCCCCccccccccccccccccccCcccCCCCCE-EEEcCCCCcccc-ccccccccCCCcc
Confidence 589999999999999999986 4567899999999 789999998631 1110011123589
Q ss_pred cCchhhhhhhcCCHHHHHHHHHHHHHHHHHhhccCCCcceeeCceecccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhh
Q 003876 124 SFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQ 203 (790)
Q Consensus 124 ~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~G~~g~~~laP~~di~r~p~~gr~~esfgeDp~l~~~~~~a~v~GlQ 203 (790)
.||+++++|||||++|++++|+++|+|+|++ |+ +++ |||++||.|||+|||++|||||||+|+++|+.|+|+|||
T Consensus 80 ~fP~~~~laat~d~~l~~~~g~~~a~E~~a~---Gi-~~~-~aP~vdi~r~p~~gR~~e~fgeDP~l~~~~a~a~v~G~q 154 (721)
T 2x41_A 80 AFPVEIMLASTWNRELLEEVGKAMGEEVREY---GV-DVL-LAPAMNIHRNPLCGRNFEYYSEDPVLSGEMASSFVKGVQ 154 (721)
T ss_dssp CCCCHHHHHHTCCHHHHHHHHHHHHHHHHHT---TC-SEE-CCCBCCCCCSTTCTTGGGSCCSSHHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHhhcCCHHHHHHHHHHHHHHHHHh---CC-CEE-eeceECCCCCCCCCcccccCCCCHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999 66 444 699999999999999999999999999999999999999
Q ss_pred cCCCCCCCCCCCcccccceeeccCCCCCCCCCccceeeeecccccCCccccCCCccceeccccChhhhhhccChhHHHHH
Q 003876 204 GENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCI 283 (790)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i 283 (790)
++ | |++|+|||||||++ +.|...++.+++++|+|+||+||+++|
T Consensus 155 ~~----------------------------g----V~a~~KHF~g~g~e----~~r~~~ds~~~~~~l~e~~l~pF~~ai 198 (721)
T 2x41_A 155 SQ----------------------------G----VGACIKHFVANNQE----TNRMVVDTIVSERALREIYLRGFEIAV 198 (721)
T ss_dssp TT----------------------------T----CBCEEEEETTCCCC----TTTTTCEEECCHHHHHHTHHHHHHHHH
T ss_pred hC----------------------------C----eEEEecccccCCCC----CCCCcccCCCCHHHHHhhhHHHHHHHH
Confidence 98 6 99999999999965 456777888999999999999999999
Q ss_pred HhCCCceeeeeccccCCcccccCHHHHHH-HHHHhCCCcEEEccchHHHHhhhc-------cccCCCH---------HHH
Q 003876 284 EQGKASCIMCSYNQVNGVPACLRGDLFQK-ARNEWGFKGYITSDCDAVATIFEY-------QNYTKTH---------EDS 346 (790)
Q Consensus 284 ~~g~~~~vM~sy~~vng~pa~~s~~ll~~-LR~e~gF~G~VvSD~~~~~~~~~~-------~~~~~~~---------~~a 346 (790)
+++.+.+||||||.+||+|||+|+++|++ ||+||||+|+|||||+++...... ....... -+.
T Consensus 199 ~~a~~~~vM~sy~~i~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~~~~~~~~~al~AG~D~~m~~~~~~~~~~~~~~~~~ 278 (721)
T 2x41_A 199 KKSKPWSVMSAYNKLNGKYCSQNEWLLKKVLREEWGFEGFVMSDWYAGDNPVEQLKAGNDLIMPGKAYQVNTERRDEIEE 278 (721)
T ss_dssp HHHCCSEEEECSSEETTEEGGGCHHHHTCCCCCCTCCCSEEEECTTCSSCHHHHHHHTCCBBCSCCGGGTCTTCCCHHHH
T ss_pred HhcCCCEEEecCCCCCCccccCCHHHHHHHHHHhcCCCEEEEccCchHHHHHHHHHcCCCcccCCCcccccchhHHHHHH
Confidence 94334599999999999999999999999 999999999999999976533210 0001111 145
Q ss_pred HHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhcccCCCCCCCCCCCCCCCccCcHHHHHHHHHHHHhhhhhhccCCCcccC
Q 003876 347 AAGVLKADKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPL 426 (790)
Q Consensus 347 ~~~al~A~~g~i~~~~id~av~Ril~~k~~~Glf~~~p~~~~~~~~~~~~v~~~~h~~lA~e~A~esiVLLKN~~~~LPL 426 (790)
+..|+ ++|+|++++||+||+|||++|+++|+|+ +|. + ...+++++|+++|+++|+||||||||++ +|||
T Consensus 279 l~~av--~~G~i~~~~id~av~Ril~~k~~~gl~~-~~~---~----~~~~~~~~h~~la~~~A~esiVLLKN~~-~LPL 347 (721)
T 2x41_A 279 IMEAL--KEGKLSEEVLDECVRNILKVLVNAPSFK-NYR---Y----SNKPDLEKHAKVAYEAGAEGVVLLRNEE-ALPL 347 (721)
T ss_dssp HHHHH--HHTSSCHHHHHHHHHHHHHHHTTSGGGG-TCC---C----CSCCCHHHHHHHHHHHHHHHCEEEEESS-CCSC
T ss_pred HHHHH--HcCCccHHHHHHHHHHHHHHHHHhCCCC-CCC---c----ccccCCHHHHHHHHHHHHhchhhhcCCC-cCCC
Confidence 55666 8999999999999999999999999998 442 1 2356789999999999999999999998 9999
Q ss_pred CCCCCCeEEEEccCcccccccCCC-ccCCCCCcCcHHHHHHhh-hc-----ceeEe-------------cc---CCCC--
Q 003876 427 NKNAVSSLAIIGPLVNNISQMGGG-YTGIPCSPKSLLRGLEAY-VS-----KTHYA-------------SG---CHDV-- 481 (790)
Q Consensus 427 ~~~~~~kIaViGp~a~~~~~~~G~-~~g~~~~~~t~~egL~~~-~~-----~~~y~-------------~g---~~~~-- 481 (790)
++. +||+||||+++....++++ +...+.+.+||+++|+++ +. .+.|. .| |...
T Consensus 348 ~~~--~kIaviG~~A~~~~~~g~gs~~~~~~~~vt~~~gl~~~G~~~~~~~~v~y~~~~~~~~~~~~~~~G~~~~~~~~~ 425 (721)
T 2x41_A 348 SEN--SKIALFGTGQIETIKGGTGSGDTHPRYAISILEGIKERGLNFDEELAKTYEDYIKKMRETEEYKPRRDSWGTIIK 425 (721)
T ss_dssp CTT--CCEEEESGGGTSCCCSCBSTTCCCCSCCCCHHHHHHHTTCCBCHHHHHHHHHHHHHHHHSTTTSCBC-----CBC
T ss_pred CCC--CEEEEEecCCcCccccCCCCCCcCcCCCCCHHHHHHHhccCCCCceEEEEeecccccccccccCCCccceecccc
Confidence 864 6999999999887653322 233567789999999998 43 25565 45 3210
Q ss_pred CCCCchhH--HHHHHHhhcCCEEEEEEecCCCCccccCCCC----CCCCCHHHHHHHHHHH----HhCCCCEEEEEeCCC
Q 003876 482 PCNSDAGF--HEAVRIAKKADFVIVVAGLDLTQETEDRDRV----SLLLPGQQMSLVTSVA----RTSKRPVILVLTGGG 551 (790)
Q Consensus 482 ~~~~~~~~--~~a~~~a~~aDvvIv~vG~~~~~e~Eg~Dr~----~l~Lp~~q~~LI~~va----~~~~~~vVVVl~~g~ 551 (790)
...+...+ ++|+++|+++|+|||++|.+ ++||.||. +|.||..|.+||++|+ ++ ++|||||+++|+
T Consensus 426 ~~~~~~~~~~~~a~~~a~~aDvvIv~vg~~---~gEg~Dr~~~~~~l~Lp~~q~~LI~~v~~~~~~~-~~~vVVVl~~g~ 501 (721)
T 2x41_A 426 PKLPENFLSEKEIHKLAKKNDVAVIVISRI---SGEGYDRKPVKGDFYLSDDETDLIKTVSREFHEQ-GKKVIVLLNIGS 501 (721)
T ss_dssp CCCCSCCSCHHHHHHHHHHCSEEEEEEECC---CBTTCCCCSSBTTTBCCHHHHHHHHHHHHHHHHT-TCCEEEEEECSS
T ss_pred CCCchhhhcHHHHHHHHhcCCEEEEEEecc---ccccccccCCCCCccCCHHHHHHHHHHHHHHHHh-CCCEEEEEecCC
Confidence 11223455 88999999999999999987 78999999 9999999999999999 77 889999999999
Q ss_pred cccc-cccccccCccEEEEccCCChhHHHHHHHHHhCCCCCCccCCceeCCCCCCCCCCCCCCcccCC---CCCCC-C--
Q 003876 552 PLDV-SFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADS---SRQYP-G-- 624 (790)
Q Consensus 552 P~~l-~~~~~~~~v~AiL~a~~pGqe~g~AiAdVL~G~~nPSGkLPvT~~p~~~~~~p~~~~~~~~~~---~~~~~-g-- 624 (790)
|++| +|. ++++|||++|+|||++|+|+||||||++|||||||+|| |++++|+|.+++...+.. ...|. |
T Consensus 502 P~~l~~~~---~~v~AiL~a~~pG~egg~AlAdVL~G~vnPSGkLPvT~-p~~~~~~p~~~~~~~~~~~~~~~~y~eg~~ 577 (721)
T 2x41_A 502 PVEVVSWR---DLVDGILLVWQAGQETGRIVADVLTGRINPSGKLPTTF-PRDYSDVPSWTFPGEPKDNPQKVVYEEDIY 577 (721)
T ss_dssp CCCCTTTG---GGCSEEEECCCCGGGHHHHHHHHHHTSSCCCCCCSSCE-ESSGGGCSCTTTTCBSTTSCSEEECTTTTC
T ss_pred ceEccchh---hcCCEEEEcCCCchhHHHHHHHHHcCCCCCCCCCceee-cCccccCccccCCCCCccccccccccCCcc
Confidence 9999 665 47999999999999999999999999999999999998 888999997212111100 01122 1
Q ss_pred CcccccCC---CcccccCCccCCCCceeccCCCccccccccccccCCCcccccccCCCCcccccccccccccceEEEEEE
Q 003876 625 RSYRFYTG---TQVYGFGHGLSYTNYSYKFLSAPSELTISASLKAGSDKNILQQTGSRLDYVHIDEVTSCTSLRFHVQIS 701 (790)
Q Consensus 625 ~~Yr~~~~---~~~ypFG~GLSYTtF~ys~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vsv~ 701 (790)
.+|||||. +|+||||||||||||+||++++ . . . ++.++|+|+
T Consensus 578 vgYry~d~~~~~plypFG~GLSYTtF~ys~~~~------~-------------~------------~----~~~~~v~v~ 622 (721)
T 2x41_A 578 VGYRYYDTFGVEPAYEFGYGLSYTTFEYSDLNV------S-------------F------------D----GETLRVQYR 622 (721)
T ss_dssp CTHHHHHHHTCCEEECTTCCBCSSCEEEEEEEE------E-------------E------------C----SSEEEEEEE
T ss_pred cccceeecCCCceeeccCCCCCcceeEeeceEe------e-------------c------------C----CCeEEEEEE
Confidence 37999974 7999999999999999999872 1 0 0 146999999
Q ss_pred EEecCCCCCceEEEEEEecCCCCCCcccccccccccc-ccCCCCEEEEEEEecCCCCceEEeCCCcEEecCceEEEEEec
Q 003876 702 VTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRV-HTVAKGSKEISFGVDPCEQLSIANKHGRRILPLGNHVLMVGE 780 (790)
Q Consensus 702 VtNtG~~~G~eVvQlY~~~p~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G~y~i~vG~ 780 (790)
|||||+++|+||||||+++|.+++.+|.||||||+|| +|+||||++|+|+|++ ++|++|| +++|++|+|+|+|+||+
T Consensus 623 VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L~pGes~~V~~~l~~-~~l~~~d-~~~~~~e~G~y~v~vG~ 700 (721)
T 2x41_A 623 IENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLLNPGESEEVVLEIPV-RDLASFN-GEEWVVEAGEYEVRVGA 700 (721)
T ss_dssp EEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCBCTTCEEEEEEEEEG-GGGCEEC-SSCEEECCEEEEEEEEE
T ss_pred EEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccCCCCCeEEEEEEECH-HHhcEEc-CCeEEEeCceEEEEEEC
Confidence 9999999999999999999999999999999999999 9999999999999998 6899999 99999999999999999
Q ss_pred CCceEEE
Q 003876 781 LRHSLTI 787 (790)
Q Consensus 781 ~s~~~~~ 787 (790)
||+++.+
T Consensus 701 ss~d~~~ 707 (721)
T 2x41_A 701 SSRNIKL 707 (721)
T ss_dssp ETTEEEE
T ss_pred CCCCcce
Confidence 9998743
No 4
>1x38_A Beta-D-glucan exohydrolase isoenzyme EXOI; 2-domain fold, ligand-protein complex; HET: NAG BMA FUC MAN IDD GOL; 1.70A {Hordeum vulgare} SCOP: c.1.8.7 c.23.11.1 PDB: 1lq2_A* 1x39_A* 1ex1_A* 1ieq_A* 1iev_A* 1iew_A* 1iex_A* 1j8v_A*
Probab=100.00 E-value=1.4e-111 Score=988.41 Aligned_cols=516 Identities=28% Similarity=0.438 Sum_probs=433.5
Q ss_pred CccCCCCCHHHHHHHHHhcCCHHHHHHhhcCCC------------------------C--------------------Cc
Q 003876 53 PFCNTSLSISTRAKSLISLLTLQEKIQQLSDNA------------------------S--------------------AI 88 (790)
Q Consensus 53 ~~~~~~~~~~~r~~~ll~~mtleEKv~ql~~~~------------------------~--------------------~i 88 (790)
||+|++++.++|+++||++|||||||+||++.. + ..
T Consensus 4 ~~~d~~~~~~~rv~~ll~~MTleEKigQl~~~~~~~~~~~~i~~~~vG~vi~~~~~~~~~~~~~~~~~~l~~~lq~~a~~ 83 (602)
T 1x38_A 4 LYKDATKPVEDRVADLLGRMTLAEKIGQMTQIERLVATPDVLRDNFIGSLLSGGGSVPRKGATAKEWQDMVDGFQKACMS 83 (602)
T ss_dssp GGGCTTSCHHHHHHHHHTTCCHHHHHHHTEEEEGGGCCHHHHHHTTCCEEEECTTCCSSTTCCHHHHHHHHHHHHHHHHT
T ss_pred cccCCCCCHHHHHHHHHHcCCHHHHHhhhcccccccccHHHHHhcCCceEEeCCcccccccCCHHHHHHHHHHHHHHhcc
Confidence 899999999999999999999999999996310 0 14
Q ss_pred ccCCCCchhhhhccccceecCCCCccccCCCCccccCchhhhhhhcCCHHHHHHHHHHHHHHHHHhhccCCCcceeeCce
Q 003876 89 PRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPN 168 (790)
Q Consensus 89 ~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~G~~g~~~laP~ 168 (790)
+|+|||++ ++.|++||+.. ..++|.||+++++|||||++|++++|+++|+|+|++ |+ +++ |||+
T Consensus 84 ~rlgiP~l-~~~D~~~G~~~----------~~~~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~---Gi-~~~-~aP~ 147 (602)
T 1x38_A 84 TRLGIPMI-YGIDAVHGQNN----------VYGATIFPHNVGLGATRDPYLVKRIGEATALEVRAT---GI-QYA-FAPC 147 (602)
T ss_dssp SSSCCCCE-EEECCSSSSTT----------STTCCCCCCHHHHHHHTCHHHHHHHHHHHHHHHHHT---TC-CEE-CCCB
T ss_pred ccCCCCcE-EEEcCCCceeC----------CCCCCCCCCHHHHHhccCHHHHHHHHHHHHHHHHHc---CC-CEE-eece
Confidence 68899998 78999998752 125899999999999999999999999999999999 66 444 6999
Q ss_pred ecccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccceeeccCCCCCCCCCccceeeeeccccc
Q 003876 169 INIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIA 248 (790)
Q Consensus 169 ~di~r~p~~gr~~esfgeDp~l~~~~~~a~v~GlQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~a~~KHF~g 248 (790)
+||.|||+|||++|||||||+++++|+. +|+|||+... .+|. + |....-+..+|++|+|||||
T Consensus 148 vdv~r~p~~GR~~esfgeDP~lv~~~a~-~v~GlQ~~~~-------~~~~------~---~~~~~~~~~gV~a~~KHFpg 210 (602)
T 1x38_A 148 IAVCRDPRWGRCYESYSEDRRIVQSMTE-LIPGLQGDVP-------KDFT------S---GMPFVAGKNKVAACAKHFVG 210 (602)
T ss_dssp CCCCSCTTSTTGGGSSCSSHHHHHHGGG-HHHHHHCCCC-------TTCC------T---TCCCCCSTTSCBCEEEEETT
T ss_pred eccccCCCcCccccCcCCCHHHHHHHHH-HHHHhcCCCc-------cccc------c---ccccccccCCeEEEeccccC
Confidence 9999999999999999999999999999 9999998421 0000 0 00000000139999999999
Q ss_pred CCccccCCCccceeccccChhhhhhccChhHHHHHHhCCCceeeeeccccCCcccccCHHHHHH-HHHHhCCCcEEEccc
Q 003876 249 YDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQK-ARNEWGFKGYITSDC 327 (790)
Q Consensus 249 ~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~~g~~~~vM~sy~~vng~pa~~s~~ll~~-LR~e~gF~G~VvSD~ 327 (790)
||.+..+ ++..++++++++|+|+||+||+++|++|+. +||||||.+||+|+|+|+++|++ ||+||||+|+|||||
T Consensus 211 ~g~~~~~---~~~~~~~~~~~~l~e~~l~pF~~ai~ag~~-~vM~sy~~v~g~pa~~s~~ll~~lLR~e~GF~G~VvSD~ 286 (602)
T 1x38_A 211 DGGTVDG---INENNTIINREGLMNIHMPAYKNAMDKGVS-TVMISYSSWNGVKMHANQDLVTGYLKDTLKFKGFVISDW 286 (602)
T ss_dssp GGGCGGG---CTTCEECCCHHHHHHHTSHHHHHHHHTTCC-EEEECSSEETTEEGGGCHHHHCCCCCTTSCCCSEEECCT
T ss_pred CCccccC---cccccCcCCHHHHHHHHHHHHHHHHHcCCC-EEEecccccCCccccCCHHHHHHHhhcccCCCeEEEccc
Confidence 9986533 333457899999999999999999999865 99999999999999999999999 999999999999999
Q ss_pred hHHHHhhhccccCCCHHHHHHHHHHH----------------------hcCCCcHHHHHHHHHHHHHHHHHhcccCCCCC
Q 003876 328 DAVATIFEYQNYTKTHEDSAAGVLKA----------------------DKGKVQEKDIDRALLNLFSVQLRLGLFNGDPR 385 (790)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~a~~~al~A----------------------~~g~i~~~~id~av~Ril~~k~~~Glf~~~p~ 385 (790)
++|.++...++ .+..+++++||+| ++|+|+++|||+||+|||++|+++|||+ +|+
T Consensus 287 ~~~~~~~~~~~--~~~~~a~~~al~AG~D~~m~~~~~~~~~~~l~~av~~G~i~~~~id~av~RiL~~k~~~glf~-~p~ 363 (602)
T 1x38_A 287 EGIDRITTPAG--SDYSYSVKASILAGLDMIMVPNKYQQFISILTGHVNGGVIPMSRIDDAVTRILRVKFTMGLFE-NPY 363 (602)
T ss_dssp TTTGGGSSSTT--TTHHHHHHHHHHHTCCBEECCSCHHHHHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHTTTTT-CCS
T ss_pred hHHHHHHhhcC--CCHHHHHHHHHHcCCCcccCCcchhhHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHhCCCC-CCC
Confidence 99998865433 3667888888877 8999999999999999999999999999 654
Q ss_pred CCCCCCCCCCccCcHHHHHHHHHHHHhhhhhhccCC--C---cccCCCCCCCeEEEEccCcccccccCCCccC-------
Q 003876 386 KGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDK--K---FLPLNKNAVSSLAIIGPLVNNISQMGGGYTG------- 453 (790)
Q Consensus 386 ~~~~~~~~~~~v~~~~h~~lA~e~A~esiVLLKN~~--~---~LPL~~~~~~kIaViGp~a~~~~~~~G~~~g------- 453 (790)
..+ . ....+++++|+++|+++|+||||||||++ + +|||++. .+||+||||+|+....++|+|+.
T Consensus 364 ~~~--~-~~~~~~~~~~~~la~~~a~~sivLLKN~~~~~~~~~LPL~~~-~~~iaviG~~A~~~~~~~gg~~~~~~g~~~ 439 (602)
T 1x38_A 364 ADP--A-MAEQLGKQEHRDLAREAARKSLVLLKNGKTSTDAPLLPLPKK-APKILVAGSHADNLGYQCGGWTIEWQGDTG 439 (602)
T ss_dssp CCG--G-GGGGTTCHHHHHHHHHHHHHHCEEEEECSSTTSCCCCSCCSC-CSEEEEESTTTTCHHHHHCSSSSSTTCCSS
T ss_pred CCc--c-hhhccCCHHHHHHHHHHHHhceEEeccCCCCCcccccccCCC-CCEEEEEcCCCccccccCCcceeeccCCCC
Confidence 211 1 12357899999999999999999999997 4 9999864 57999999999886555566532
Q ss_pred CCCCcCcHHHHHHhhhc---ceeEeccCCCCCCCCchhHHHHHHHhhcCCEEEEEEecCCCCccccCCCCCCCCCHHHHH
Q 003876 454 IPCSPKSLLRGLEAYVS---KTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMS 530 (790)
Q Consensus 454 ~~~~~~t~~egL~~~~~---~~~y~~g~~~~~~~~~~~~~~a~~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~~q~~ 530 (790)
.+...+|++++|++.+. .+.|..++. . ++. .++++|+|||++|.+...++|| ||.+|.||+.|.+
T Consensus 440 ~~~~~~t~~~~l~~~~~~~~~v~~~~~~~---------~-~~~-~a~~aD~viv~~g~~~~~e~~g-dr~~l~lp~~q~~ 507 (602)
T 1x38_A 440 RTTVGTTILEAVKAAVDPSTVVVFAENPD---------A-EFV-KSGGFSYAIVAVGEHPYTETKG-DNLNLTIPEPGLS 507 (602)
T ss_dssp CCSSCBCHHHHHHHHSCTTCEEEEESSCC---------H-HHH-HHTTCSCEEEEEECCCCCGGGG-CCSSCCCCSSSHH
T ss_pred CCCCcccHHHHHHHHhCCCeEEEEcCCCC---------H-HHH-HHhhCCEEEEEeccCcccccCC-CcCCcCCChhHHH
Confidence 24567899999998753 366766542 1 222 3899999999999988888998 9999999999999
Q ss_pred HHHHHHHhCCCCEEEEEeCCCcccccccccccCccEEEEccCCChhHHHHHHHHHhCCCCCCccCCceeCCCCCCCCCCC
Q 003876 531 LVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMN 610 (790)
Q Consensus 531 LI~~va~~~~~~vVVVl~~g~P~~l~~~~~~~~v~AiL~a~~pGqe~g~AiAdVL~G~~nPSGkLPvT~~p~~~~~~p~~ 610 (790)
||++|++ ++|||||+++|+|++|.++. ++++|||++|+||+++ +|+||||||++|||||||+|| |++.+|+|.+
T Consensus 508 li~~v~~--~~~~VvVl~~g~P~~l~~~~--~~~~Ail~a~~pG~~g-~AiadvL~G~~nPsGkLP~t~-p~~~~~~p~~ 581 (602)
T 1x38_A 508 TVQAVCG--GVRCATVLISGRPVVVQPLL--AASDALVAAWLPGSEG-QGVTDALFGDFGFTGRLPRTW-FKSVDQLPMN 581 (602)
T ss_dssp HHHHHHT--TSCEEEEEECSSCCCCHHHH--HHCSEEEEEECCCSBT-HHHHHHHTTSSCCCCCCSSCB-CSCGGGCSCC
T ss_pred HHHHHHh--CCCEEEEEeCCCceeccchh--hccCeEEeccCCchHH-HHHHHHHcCCCCCCccCcccc-cCccccCCcc
Confidence 9999987 68999999999999996543 5899999999999998 999999999999999999997 8888888863
Q ss_pred CCCcccCCCCCCCCCcccccCCCcccccCCccCCCC
Q 003876 611 DMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTN 646 (790)
Q Consensus 611 ~~~~~~~~~~~~~g~~Yr~~~~~~~ypFG~GLSYTt 646 (790)
+ +||||+ |+||||||||||+
T Consensus 582 ~--------------g~~~~~--plypFG~GLSYt~ 601 (602)
T 1x38_A 582 V--------------GDAHYD--PLFRLGYGLTTNA 601 (602)
T ss_dssp T--------------TCSSCC--CSBCTTCCBCCCC
T ss_pred C--------------CCCCCC--ccCcCCCCcCCCC
Confidence 1 488886 9999999999996
No 5
>3rrx_A EXO-1,3/1,4-beta-glucanase; (alpha/beta)8 barrel,(alpha/beta)6 sheet, hydrolase; 1.90A {Pseudoalteromonas SP} PDB: 3usz_A 3f93_A 3f94_A 3ut0_A
Probab=100.00 E-value=1.8e-111 Score=1001.11 Aligned_cols=506 Identities=26% Similarity=0.422 Sum_probs=416.1
Q ss_pred CHHHHHHHHHhcCCHHHHHHhhcCCC--------------------CC-----------------------------ccc
Q 003876 60 SISTRAKSLISLLTLQEKIQQLSDNA--------------------SA-----------------------------IPR 90 (790)
Q Consensus 60 ~~~~r~~~ll~~mtleEKv~ql~~~~--------------------~~-----------------------------i~r 90 (790)
+.++||++||++|||||||+||++.. .+ ..|
T Consensus 21 ~~~~rV~~ll~~MTLeEKiGQL~~~~~~~~~~~~i~~~~vGgvi~~~~~~p~~~~~~s~~q~~~l~~~lq~~a~~~~~~r 100 (822)
T 3rrx_A 21 AVEAQIEKLLAKMTIEQKVAQMIQPEIGYLTVEQMRKYGFGSYLNGGNTAPYGNKRADQATWLKYADEMYLAAMDSTLDG 100 (822)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHEECBTTTCCHHHHHHHCCSEEEECSSSCGGGCSSCCHHHHHHHHHHHHHHHHCCTTTC
T ss_pred cHHHHHHHHHHcCCHHHHHhCccccccCCCCHHHHHhCCCceEEECCccCccccccCCHHHHHHHHHHHHHHHHhhhccc
Confidence 67999999999999999999996410 00 136
Q ss_pred CCCCchhhhhccccceecCCCCccccCCCCccccCchhhhhhhcCCHHHHHHHHHHHHHHHHHhhccCCCcceeeCceec
Q 003876 91 LGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNIN 170 (790)
Q Consensus 91 lgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~G~~g~~~laP~~d 170 (790)
+|||++ ++.|++||+.. ..++|.||+++++|||||++|++++|+++|+|+|++ |+ +++ |+|++|
T Consensus 101 lgIPll-~~~D~~~G~~~----------~~~aT~FP~~i~laAt~d~~L~~~~g~~ia~E~ra~---Gi-n~~-~aPvvD 164 (822)
T 3rrx_A 101 IAIPTV-WGTDAMHGHSN----------VYGATLFPHNIGLGAARDTDLIKRIGQATAKEVAAT---GI-EWS-FAPTVA 164 (822)
T ss_dssp CCCCCE-EEEECTTSSTT----------STTCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHTT---TC-CEE-EEEECC
T ss_pred CCCCeE-EEeccCCcEEc----------cCCCCCCcCHHHHhhcCCHHHHHHHHHHHHHHHHhc---CC-cEe-eccccc
Confidence 899998 78999999752 125899999999999999999999999999999999 66 444 699999
Q ss_pred ccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccceeeccCCCCCCCCCccceeeeecccccCC
Q 003876 171 IFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAYD 250 (790)
Q Consensus 171 i~r~p~~gr~~esfgeDp~l~~~~~~a~v~GlQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~a~~KHF~g~g 250 (790)
|.|||+|||++|||||||+|+++|+.|+|+|||+.... ++. ...+|++|+|||||||
T Consensus 165 v~rdPr~GR~~EsfGEDP~lv~~~a~A~V~GlQ~~~~~----------------~~~-------~~~gV~a~~KHFpG~G 221 (822)
T 3rrx_A 165 VVRDDRWGRTYESYSEDPDLVKRYAGEMVTGIQGDVGA----------------DFL-------KGSNRIATAKHFVGDG 221 (822)
T ss_dssp CCSCTTSTTGGGSSCSCHHHHHHHHHHHHHHHHCCSST----------------TTT-------CTTCCEEEEEEESCGG
T ss_pred cccCCCcCccccCCCCCHHHHHHHHHHHHHHHhccccc----------------ccc-------cCCCeEEEeeeccCCC
Confidence 99999999999999999999999999999999986200 000 0113999999999999
Q ss_pred ccccCCCccceeccccChhhhhhccChhHHHHHHhCCCceeeeeccccCCcccccCHHHHHH-HHHHhCCCcEEEccchH
Q 003876 251 LEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVNGVPACLRGDLFQK-ARNEWGFKGYITSDCDA 329 (790)
Q Consensus 251 ~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~~g~~~~vM~sy~~vng~pa~~s~~ll~~-LR~e~gF~G~VvSD~~~ 329 (790)
.+.. +|+..++.+++++|+|+||+||+.+|++|+. +||||||.+||+|+|.|++||++ ||+||||+|+|||||++
T Consensus 222 ~~~~---~r~~~~~~vs~~~L~e~~L~PF~~aI~ag~~-sVM~syn~vng~pa~~s~~lLtdlLR~e~GF~G~VvSD~~~ 297 (822)
T 3rrx_A 222 GTER---GVDRGNTLIDEKGLRDIHSAGYFSAINQGVQ-SVMASFNSWNGKRVHGDKHLLTDVLKNQLGFDGFVVSDWNA 297 (822)
T ss_dssp GBGG---GCTTCEECCCHHHHHHTTSHHHHHHHHTTCS-EEEECSSEETTEEGGGCHHHHTCCCCCCSCCCSEEECCTTG
T ss_pred cccc---CccCccCcCCHHHHHHHhhHHHHHHHHcCCC-EEEeccccCCCccccCCHHHHHHHHHHhcCCCeEEecccch
Confidence 6532 3444567889999999999999999999876 99999999999999999999999 99999999999999999
Q ss_pred HHHhhhcc----------c-----cCCCHH---HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhcccCCCCCCC--CC
Q 003876 330 VATIFEYQ----------N-----YTKTHE---DSAAGVLKADKGKVQEKDIDRALLNLFSVQLRLGLFNGDPRKG--KY 389 (790)
Q Consensus 330 ~~~~~~~~----------~-----~~~~~~---~a~~~al~A~~g~i~~~~id~av~Ril~~k~~~Glf~~~p~~~--~~ 389 (790)
|+.+.... + ...+.. +....++ ++|+|+++|||+||+|||++|+++|||+ +|+.. ++
T Consensus 298 ~~~i~~~~~ea~~~Al~AG~Dm~m~~~~~~~~~~~l~~aV--~~G~i~e~rID~av~RIL~~K~~lGLfd-~p~~~~~~~ 374 (822)
T 3rrx_A 298 HKFVEGCDLEQCAQAINAGVDVIMVPEHFEAFYHNTVKQV--KAGVIAESRINDAVRRFLRAKIRWGVFT-KSKPSARPE 374 (822)
T ss_dssp GGGSTTCBTTBCHHHHHHTCCBEECTTTHHHHHHHHHHHH--HTTSSCHHHHHHHHHHHHHHHHHHTTTT-SCCGGGSGG
T ss_pred hhhhcCChHHHHHHHHHcCCCEECCCccHHHHHHHHHHHH--HcCCCCHHHHHHHHHHHHHHHHHcCCCC-CCCcccccc
Confidence 87653210 0 001111 1222233 8999999999999999999999999999 55321 11
Q ss_pred CCCCCCccCcHHHHHHHHHHHHhhhhhhccCCCcccCCCCCCCeEEEEccCcccccccCCCcc----C------CCCCcC
Q 003876 390 GKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYT----G------IPCSPK 459 (790)
Q Consensus 390 ~~~~~~~v~~~~h~~lA~e~A~esiVLLKN~~~~LPL~~~~~~kIaViGp~a~~~~~~~G~~~----g------~~~~~~ 459 (790)
.. ....+++++|+++||++|+||||||||++++|||++. +||+||||+|++...+.|+|+ | .+++.+
T Consensus 375 ~~-~~~~v~~~eh~~lAre~A~eSiVLLKN~~~~LPL~~~--~~IaViGp~A~~~~~~~Ggws~~~~G~gs~~~~~~~~~ 451 (822)
T 3rrx_A 375 SQ-HPQWLGAAEHRTLAREAVRKSLVLLKNNESILPIKAS--SRILVAGKGANAINMQAGGWSVSWQGTDNTNSDFPNAT 451 (822)
T ss_dssp GS-CGGGTTCHHHHHHHHHHHHHHCEEEEEGGGCCSBCTT--SEEEEESTTTTCHHHHHCSSSSSSSCTTCCGGGSTTCB
T ss_pred cc-cccccCCHHHHHHHHHHHHhceEEEecCCCccCCCCC--CeEEEEcCCccchhhccCCcceeccccCCCcCCCCCCC
Confidence 11 1245789999999999999999999999899999874 699999999998766667664 1 134679
Q ss_pred cHHHHHHhhhcc----eeEeccCCCCCCCCchhHHHHHHHhhcCCEEEEEEecCCCCccccCCCCCCCCC---HHHHHHH
Q 003876 460 SLLRGLEAYVSK----THYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLP---GQQMSLV 532 (790)
Q Consensus 460 t~~egL~~~~~~----~~y~~g~~~~~~~~~~~~~~a~~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp---~~q~~LI 532 (790)
|+++||++++.. +.|.... +.++++|++||++|++...|++| ||.+|.|| +.|.+||
T Consensus 452 t~l~gi~~~~~~~~~~v~~~~~~---------------~~a~~aDv~Iv~~Ge~~~~e~~g-Dr~~L~lp~g~~~q~~Li 515 (822)
T 3rrx_A 452 SIFSGLQSQVTKAGGKITLSESG---------------EYTSKPDVAIVVIGEEPYAEWFG-DIELLEFQHETKHALALL 515 (822)
T ss_dssp CHHHHHHHHHHHTTCEEEECTTC---------------CCSSCCSEEEEEEECCCCCGGGG-CCSCCBTTTTTCHHHHHH
T ss_pred CHHHHHHHHHHhcCCeEEEcccc---------------cccccCCeEEEEecCCcccccCC-CcccccCCCCChHHHHHH
Confidence 999999987642 3333211 24688999999999988777776 99999999 6899999
Q ss_pred HHHHHhCCCCEEEEEeCCCcccccccccccCccEEEEccCCChhHHHHHHHHHhCCC------CCCccCCceeCCCCCCC
Q 003876 533 TSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEAGAKALAEIIFGDF------NPGGRLPMTWYPESFTK 606 (790)
Q Consensus 533 ~~va~~~~~~vVVVl~~g~P~~l~~~~~~~~v~AiL~a~~pGqe~g~AiAdVL~G~~------nPSGkLPvT~~p~~~~~ 606 (790)
++|+++ ++|||||+++|+|+.|.++. ++++|||++||||++++ ||||||||++ |||||||+|| |++.+|
T Consensus 516 ~av~a~-g~pvVvVl~sGrP~~l~~~~--~~~~Ail~aw~pG~eGg-AiAdVLfG~v~g~~~~nPSGkLP~T~-P~~~~q 590 (822)
T 3rrx_A 516 KQLKAD-NIPVVTVFLSGRPLWVNKEL--NASDAFVAAWLPGSEGE-GVADVLLTNKQGKTQFDFTGKLSFSW-PKYDDQ 590 (822)
T ss_dssp HHHHHT-TCCEEEEEECSSCCBCHHHH--HTCSEEEEEECCCSBTH-HHHHHHBBCTTSCBSCCCCCCCSSCB-CSSTTC
T ss_pred HHHHHh-CCCEEEEEeCCcceeccchh--hhCCeEEEcCCCCchhH-HHHHHHhcccccccccCCCCCCceec-cCCccc
Confidence 999998 89999999999999997654 47999999999999987 9999999997 9999999997 999999
Q ss_pred CCCCCCCcccCCCCCCCCCcccccCCCcccccCCccCCCCceecc
Q 003876 607 VPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYSYKF 651 (790)
Q Consensus 607 ~p~~~~~~~~~~~~~~~g~~Yr~~~~~~~ypFG~GLSYTtF~ys~ 651 (790)
+|+.+. +.+| +|+||||||||||||+|..
T Consensus 591 ~P~~~~--------------~~~~--~PlypFG~GLSYt~f~~~~ 619 (822)
T 3rrx_A 591 FTLNLN--------------DADY--DPLFAYGYGLTYQDNINVP 619 (822)
T ss_dssp TTCCTT--------------CSSC--CCSBCTTCCBCTTCCCCCC
T ss_pred CCcccC--------------CCCC--ccccCCCCCcCCCCCcccc
Confidence 997321 1122 7999999999999999864
No 6
>3bmx_A Uncharacterized lipoprotein YBBD; beta-N-hexosaminidase, TIM barrel, glycos hydrolase, membrane, palmitate; HET: P4G; 1.40A {Bacillus subtilis} PDB: 3cqm_A* 3nvd_A* 3lk6_A*
Probab=100.00 E-value=1.7e-98 Score=882.90 Aligned_cols=487 Identities=19% Similarity=0.260 Sum_probs=386.8
Q ss_pred CCCHHHHHHHHHhcCCHHHHHHhhcCCCC-------------C-------------------------------------
Q 003876 58 SLSISTRAKSLISLLTLQEKIQQLSDNAS-------------A------------------------------------- 87 (790)
Q Consensus 58 ~~~~~~r~~~ll~~mtleEKv~ql~~~~~-------------~------------------------------------- 87 (790)
+.+.++|+++||++|||||||+||++... +
T Consensus 28 ~~~~~~rv~~ll~~MTleEKiGQl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vGgvil~~~n~~~~~q~~~l~~ 107 (642)
T 3bmx_A 28 ASKRAIDANQIVNRMSLDEKLGQMLMPDFRNWQKEGESSPQALTKMNDEVASLVKKYQFGGIILFAENVKTTKQTVQLTD 107 (642)
T ss_dssp HHHHHHHHHHHHHTSCHHHHHHHTEECBCSEECCTTCSSCEECCSCCHHHHHHHHHHCCSEEECCGGGCSSHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCHHHHHhCceeecccccccccccccCCCCCCcHHHHHHHHhCCCcEEEECCCCCCCHHHHHHHHH
Confidence 45679999999999999999999964210 0
Q ss_pred -c--ccCCCCchhhhhccccceecCCCCccccCCCCccccCchhhhhhhcCCHHHHHHHHHHHHHHHHHhhccCCCccee
Q 003876 88 -I--PRLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTF 164 (790)
Q Consensus 88 -i--~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~G~~g~~~ 164 (790)
+ .++|||++ +..|++||. +.+... .|.||+++++|||||++|++++|+++|+|+|++ |+ +++
T Consensus 108 ~lq~~~~~iPll-i~~D~e~G~--------v~r~~~-~t~fP~~~~laat~d~~l~~~~g~~~a~E~ra~---Gi-~~~- 172 (642)
T 3bmx_A 108 DYQKASPKIPLM-LSIDQEGGI--------VTRLGE-GTNFPGNMALGAARSRINAYQTGSIIGKELSAL---GI-NTD- 172 (642)
T ss_dssp HHHHHCSSSCCE-EEECCCBTT--------BCCCSS-SCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHH---TC-CEE-
T ss_pred HHHHHhcCCCcE-EEEcCCCCc--------eecCCC-CCCCCCHHHHHhhCCHHHHHHHHHHHHHHHHHc---CC-CEE-
Confidence 0 24678877 455666654 333323 399999999999999999999999999999999 66 454
Q ss_pred eCceecccCCCCCCC-CCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccceeeccCCCCCCCCCccceeeee
Q 003876 165 WAPNINIFRDPRWGR-GQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACC 243 (790)
Q Consensus 165 laP~~di~r~p~~gr-~~esfgeDp~l~~~~~~a~v~GlQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~a~~ 243 (790)
|||++||.|||+||| ++|||||||+++++|+.|+|+|||+. | |++|+
T Consensus 173 ~aPvvDv~r~p~~grig~rsfgeDP~lv~~~a~a~v~Glq~~----------------------------g----V~a~~ 220 (642)
T 3bmx_A 173 FSPVVDINNNPDNPVIGVRSFSSNRELTSRLGLYTMKGLQRQ----------------------------D----IASAL 220 (642)
T ss_dssp CCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHHHT----------------------------T----CEEEE
T ss_pred ECCccccCCCCCCCcccccccCCCHHHHHHHHHHHHHHHHhC----------------------------C----ceEEe
Confidence 699999999999997 79999999999999999999999998 6 99999
Q ss_pred cccccCCccccCCCccceeccccChhhhhhccChhHHHHHHhCCCceeeee---ccccC-------------CcccccCH
Q 003876 244 KHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCS---YNQVN-------------GVPACLRG 307 (790)
Q Consensus 244 KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~~g~~~~vM~s---y~~vn-------------g~pa~~s~ 307 (790)
|||||||.+..+.|... ..+.+++++|+|+||+||+++|++|+. +|||| ||.+| |+|||+|+
T Consensus 221 KHFpg~g~~~~dsh~~~-~~~~~~~~~l~e~~l~PF~~ai~ag~~-~VM~ah~~y~~id~~~~~~~~~g~~~g~pa~~s~ 298 (642)
T 3bmx_A 221 KHFPGHGDTDVDSHYGL-PLVSHGQERLREVELYPFQKAIDAGAD-MVMTAHVQFPAFDDTTYKSKLDGSDILVPATLSK 298 (642)
T ss_dssp EEETCCTTCSSCTTTSC-CBCCCCHHHHHHTTHHHHHHHHHTTCC-EEEECCCBCTTTCCCEEECTTTSCEEECBGGGCH
T ss_pred ccccCCCCccCCCCCCC-ceeccCHHHHhhhhHHHHHHHHHcCCC-EEEEccccccccCccccccccccccCcccccCCH
Confidence 99999998766655322 235679999999999999999999875 99999 66778 78999999
Q ss_pred HHHHH-HHHHhCCCcEEEccchHHHHhhhccccCCCHHHHHHHHHHH-------------------------------hc
Q 003876 308 DLFQK-ARNEWGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKA-------------------------------DK 355 (790)
Q Consensus 308 ~ll~~-LR~e~gF~G~VvSD~~~~~~~~~~~~~~~~~~~a~~~al~A-------------------------------~~ 355 (790)
++|++ ||+||||+|+|||||++|+++.+. .+..+++++||+| ++
T Consensus 299 ~ll~~lLR~e~GF~G~VvSD~~~m~ai~~~----~~~~~a~~~Al~AG~D~~l~~~~~~~~~~~~~~~~~~~~l~~av~~ 374 (642)
T 3bmx_A 299 KVMTGLLRQEMGFNGVIVTDALNMKAIADH----FGQEEAVVMAVKAGVDIALMPASVTSLKEEQKFARVIQALKEAVKN 374 (642)
T ss_dssp HHHCCCCCCCSCCCSEEECSCTTSHHHHTT----SCHHHHHHHHHHHTCSBEESCSCCCSGGGTHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhCcCCCCEEEEeCchhhHHHHhc----CCHHHHHHHHHHcCCCEecccccccccccchhHHHHHHHHHHHHHc
Confidence 99999 999999999999999999887642 1223333333322 78
Q ss_pred CCCcHHHHHHHHHHHHHHHHHhcccCCCCCCCCCC--CCCCCccCcHHHHHHHHHHHHhhhhhhccCCCcccCCCCCCCe
Q 003876 356 GKVQEKDIDRALLNLFSVQLRLGLFNGDPRKGKYG--KLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLNKNAVSS 433 (790)
Q Consensus 356 g~i~~~~id~av~Ril~~k~~~Glf~~~p~~~~~~--~~~~~~v~~~~h~~lA~e~A~esiVLLKN~~~~LPL~~~~~~k 433 (790)
|+|+++|||+||+|||++|+++|+|+..|+..... ......+++++|+++|+++|++|||||||++++|||++.+.+|
T Consensus 375 G~i~~~~id~av~RiL~~k~~~gl~~~~p~~~~~~~~~~~~~~~~~~~~~~la~~~a~~sivLLKN~~~~LPL~~~~~~~ 454 (642)
T 3bmx_A 375 GDIPEQQINNSVERIISLKIKRGMYPARNSDSTKEKIAKAKKIVGSKQHLKAEKKLAEKAVTVLKNEQHTLPFKPKKGSR 454 (642)
T ss_dssp TSSCHHHHHHHHHHHHHHHHHTTCSSCCCCCCHHHHHHHHHHHTTCHHHHHHHHHHHHHHCEEEEEGGGCCSCCCCTTCE
T ss_pred CchhHHHHHHHHHHHHHHHHHcCCCcCCCCcccccchhhhhhhcCCHHHHHHHHHHHHhCEEEEccCCCcCCCCCCCCCE
Confidence 99999999999999999999999999325321000 0002346799999999999999999999998999998645679
Q ss_pred EEEEccCcccccccCCCccCCCCCcCcHHHHHHhhhc--ceeEeccCCCCCCCCchhHHHHHHHhhcCCEEEEEEecCCC
Q 003876 434 LAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVS--KTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLT 511 (790)
Q Consensus 434 IaViGp~a~~~~~~~G~~~g~~~~~~t~~egL~~~~~--~~~y~~g~~~~~~~~~~~~~~a~~~a~~aDvvIv~vG~~~~ 511 (790)
|+||||++.. ..+++++|+++.. ...+..+|... ......+++++++++++|+|||+++....
T Consensus 455 iaviG~~~~~--------------~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~a~~~a~~aDvvIv~~~~~~~ 519 (642)
T 3bmx_A 455 ILIVAPYEEQ--------------TASIEQTIHDLIKRKKIKPVSLSKMN-FASQVFKTEHEKQVKEADYIITGSYVVKN 519 (642)
T ss_dssp EEEEESSHHH--------------HHHHHHHHHHHHHTTSSCCCEEEEEE-CTTCCCCHHHHHHHHHCSEEEEEECCSSC
T ss_pred EEEEeCCccc--------------hhhHHHHHHHhhCCCCeeEEeccCCC-CcchhhHHHHHHHHhhCCEEEEEecCCCC
Confidence 9999998543 3578999998762 22333332110 01124567899999999999996654311
Q ss_pred CccccCCCCCCCCCHHH------------HHHHHHHHHhCCCCEEEEEeCCCcccccccccccCccEEEEccCC------
Q 003876 512 QETEDRDRVSLLLPGQQ------------MSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYP------ 573 (790)
Q Consensus 512 ~e~Eg~Dr~~l~Lp~~q------------~~LI~~va~~~~~~vVVVl~~g~P~~l~~~~~~~~v~AiL~a~~p------ 573 (790)
...| ++.+|+.| .+||+++++. ++|+|||+ .|+||+++|+. +++|||++|++
T Consensus 520 ~~~e-----~~~l~~~q~~~~~~~~~~~~~~li~~~~~~-~~pvVvv~-~g~P~~l~~~~---~~~Ail~a~~~~G~~~g 589 (642)
T 3bmx_A 520 DPVV-----NDGVIDDTISDSSKWATVFPRAVMKAALQH-NKPFVLMS-LRNPYDAANFE---EAKALIAVYGFKGYANG 589 (642)
T ss_dssp CCCE-----ETTEECCCCCSSTTHHHHHHHHHHHHHHHT-TCCEEEEE-CSCGGGGGGCT---TCSEEEECSCCCCEETT
T ss_pred Cchh-----ccCCccccccccccccchhHHHHHHHHHHc-CCCEEEEe-cCChhcccccc---ccCeEEEEccCcccccc
Confidence 1222 34566677 8999999887 88988876 59999999883 69999999999
Q ss_pred --ChhHHHHHHHHHhCCCCCCccCCceeCCCCCCCCCCCCCCcccCCCCCCCCCcccccCCCcccccCCccCCCCce
Q 003876 574 --GEAGAKALAEIIFGDFNPGGRLPMTWYPESFTKVPMNDMNMRADSSRQYPGRSYRFYTGTQVYGFGHGLSYTNYS 648 (790)
Q Consensus 574 --Gqe~g~AiAdVL~G~~nPSGkLPvT~~p~~~~~~p~~~~~~~~~~~~~~~g~~Yr~~~~~~~ypFG~GLSYTtF~ 648 (790)
|+++|+|+||||||++|||||||+|| |++. ++ .+|+||||||||||+|.
T Consensus 590 ~~g~~~g~AiadvLfG~~nPsGkLPvt~-p~~~-----------------~~--------~~plfpfG~GLsYt~~~ 640 (642)
T 3bmx_A 590 RYLQPNIPAGVMAIFGQAKPKGTLPVDI-PSVT-----------------KP--------GNTLYPLGYGLNIKTGR 640 (642)
T ss_dssp EESCSHHHHHHHHHTTSSCCCCCCSSCE-ECSS-----------------ST--------TSEEECTTCCBCTTTCS
T ss_pred cccchHHHHHHHHHcCCCCCCccCceee-eccC-----------------CC--------CCcccCCCCCccCCCCC
Confidence 89999999999999999999999998 5532 11 25899999999999984
No 7
>3sql_A Glycosyl hydrolase family 3; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM-barrel, alpha-beta-alpha sandwich; HET: MSE; 2.25A {Synechococcus SP} PDB: 3sqm_A*
Probab=100.00 E-value=1.7e-68 Score=607.89 Aligned_cols=402 Identities=15% Similarity=0.171 Sum_probs=301.9
Q ss_pred CCCCchhhhhccccceecCCCCccccCCCCccccCchhhhhhhcCCH------HHHHHHHHHHHHHHHHhhccCCCccee
Q 003876 91 LGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNR------SLWSNIGSAVAVEARAMYNLGQAGLTF 164 (790)
Q Consensus 91 lgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~------~l~~~~g~~~g~E~ra~~~~G~~g~~~ 164 (790)
.|||++ +..|.+||.. .+. .++|.||+++++|||||. +|++++|+++|+|+|++ |+ +++
T Consensus 82 agiPll-i~~D~egG~v--------~rl-~~~T~fP~~~alaat~~~d~~~~~~La~~~G~~~a~Elra~---Gi-n~~- 146 (535)
T 3sql_A 82 AEIPLL-IAADIEEGVG--------QRF-RGATEFPPPMAFGEIWRTDPHQAIALAETMGATTAQEALSL---GI-NWV- 146 (535)
T ss_dssp CSSCCE-EEECCSSCHH--------HHS-TTSCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHH---TC-CEE-
T ss_pred cCCCeE-EEeccCCCce--------eec-CCCCCCCCHHHHHHHhCCChhHHHHHHHHHHHHHHHHHHHh---CC-CEE-
Confidence 467776 4556666542 221 258999999999999955 68999999999999999 66 444
Q ss_pred eCceecccCCCCCC-CCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccceeeccCCCCCCCCCccceeeee
Q 003876 165 WAPNINIFRDPRWG-RGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACC 243 (790)
Q Consensus 165 laP~~di~r~p~~g-r~~esfgeDp~l~~~~~~a~v~GlQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~a~~ 243 (790)
|||++||.|||+|| |++|||||||+++++|+.|||+|||+. | |++|+
T Consensus 147 fAPvvDv~r~P~~g~ig~rsfGEDP~lv~~~a~A~v~GlQ~~----------------------------g----V~a~~ 194 (535)
T 3sql_A 147 LAPVLDVNNNPHNPVINIRAFGETPDQVSALGTAFIRGAQQY----------------------------A----VLTTA 194 (535)
T ss_dssp CCCBCCCCCCTTCSSSGGGSSCSSHHHHHHHHHHHHHHHTTS----------------------------S----CBCEE
T ss_pred ecCeeccCCCCCCCCccccCCCCCHHHHHHHHHHHHHHHhhc----------------------------c----cceee
Confidence 59999999999999 789999999999999999999999998 6 99999
Q ss_pred cccccCCccccCCCccceeccccChhhhhhccChhHHHHHHhCCCceeeeeccccC----CcccccCHHHHHH-HHHHhC
Q 003876 244 KHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCSYNQVN----GVPACLRGDLFQK-ARNEWG 318 (790)
Q Consensus 244 KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~~g~~~~vM~sy~~vn----g~pa~~s~~ll~~-LR~e~g 318 (790)
|||||||.+..++|.... .++.++++|+|+||+||+++|++|+. +||||||.+| ++|||+|+++|++ ||+|||
T Consensus 195 KHFpG~G~~~~Dsh~~~~-~v~~s~~~L~e~~L~PF~~aI~ag~~-sVM~ah~~v~~lD~~~PAs~S~~lLtdlLR~e~G 272 (535)
T 3sql_A 195 KHFPGHGDTATDSHLALP-TISHDDTRLNTVELPPFKAAIQGGVD-AVMNAHLMIPAWDQQYPATLSPAILTGQLRHKLG 272 (535)
T ss_dssp EEETCCCSCSCCTTTSCC-BCCCCHHHHHHTTSHHHHHHHHTTCS-EEEECCCBBTTTBSSSCGGGCHHHHCCCCCCCSC
T ss_pred eeecccCCcccCCccCCC-cCCCCHHHHHHHHHHHHHHHHHcCCC-EEEecCccCCCcCCCcCcccCHHHHHHHHHHhcC
Confidence 999999988766663332 35679999999999999999999866 9999999887 4899999999999 999999
Q ss_pred CCcEEEccchHHHHhhhccccCCCHHHHHHHHHHH----------------------hcCCCcHHHHHHHHHHHHHHHHH
Q 003876 319 FKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKA----------------------DKGKVQEKDIDRALLNLFSVQLR 376 (790)
Q Consensus 319 F~G~VvSD~~~~~~~~~~~~~~~~~~~a~~~al~A----------------------~~g~i~~~~id~av~Ril~~k~~ 376 (790)
|+|+|||||++|+++.. ..+..+++++||+| ++|+|+++|||+||+|||++|++
T Consensus 273 F~G~VvSD~l~m~ai~~----~~~~~eaa~~Al~AG~Dm~l~~~~~~~~~~~l~~AV~~G~i~e~rId~av~RIL~~K~~ 348 (535)
T 3sql_A 273 FKGLIVTDALVMGGITQ----FAAPDTVVVQAIAAGADILLMPPDVDGAIIAIETAIKTGQLSESRIYESVERIWQAKQK 348 (535)
T ss_dssp CCSEEECSCTTSHHHHT----TSCHHHHHHHHHHHTCSBEESCSCHHHHHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHH
T ss_pred CCceEEcChhHHHHHHh----cCCHHHHHHHHHHCCCCeecCCCCHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999875 23677888888887 89999999999999999999999
Q ss_pred hcccCCCCCCCCCCCCCCCccCcHHHHHHHHHHHHhhhhhhccCCCcccCC----CCCCCeEEEEccCcccccccCCCcc
Q 003876 377 LGLFNGDPRKGKYGKLGPDDVCTSEHKKLALDAARQGIVLLKNDKKFLPLN----KNAVSSLAIIGPLVNNISQMGGGYT 452 (790)
Q Consensus 377 ~Glf~~~p~~~~~~~~~~~~v~~~~h~~lA~e~A~esiVLLKN~~~~LPL~----~~~~~kIaViGp~a~~~~~~~G~~~ 452 (790)
+|+|+ .+.. .. ...+++++|+++|+|+|+||||| + ++|||+ +.+.++|+|||++++.+. |+
T Consensus 349 lGl~~-~~~~----~~-~~~~~~~eh~~lA~e~A~eSiVL---~-~~LPL~~~~~~~~~~~laVIG~~a~~~~-----~~ 413 (535)
T 3sql_A 349 ILTAT-PSTF----PQ-GISGDRPETRKTVAMVLERATKH---Q-KSLVKISSFPDNFARNLIVVDSVLKSPF-----LR 413 (535)
T ss_dssp HHTSC-CCCT----TT-TCCTTCHHHHHHHHHHHHHHCEE---C-SSCCCCCCCSTTSEEEEEEESCGGGCTT-----CC
T ss_pred hcCCC-CCcc----ch-hhccCCHHHHHHHHHHHHhCeEE---C-CcCCCCcccccCCCCEEEEECCCCCCcc-----cC
Confidence 99998 3321 11 23678999999999999999999 3 599998 345689999999997643 45
Q ss_pred CCCCCcCcHHHHHHhhhcceeEeccCCCCCCCCchhHHHHHHHhhcCCEEEEEEecCCCCccccCCCCCCCCCHHHHHHH
Q 003876 453 GIPCSPKSLLRGLEAYVSKTHYASGCHDVPCNSDAGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLV 532 (790)
Q Consensus 453 g~~~~~~t~~egL~~~~~~~~y~~g~~~~~~~~~~~~~~a~~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~~q~~LI 532 (790)
|.++..++| ++..-++.+...++. ... ......-.+=+|+-.++-.. +.. |+ .+++
T Consensus 414 g~~~~~~~P----~~~G~~~~~~~~~~~---------~~~-~~~~~~~~~q~f~r~~~f~~-------~~~-~~--~~~~ 469 (535)
T 3sql_A 414 PNCPAIAIP----QRHGYAAEIVELKTL---------PRL-QLEAIPTLIQCFLRGNPFTE-------KLA-DP--IDVL 469 (535)
T ss_dssp TTCHHHHHH----HTTTEEEEEEETTTG---------GGB-CCCSSCEEEEEEECCCSSCS-------SCC-CC--HHHH
T ss_pred CCCCcccCH----HHcCceEEEEcCccc---------ccc-ccCCCCeEEEEeecCCCCCC-------Ccc-hH--HHHH
Confidence 555555555 333223444433210 000 00111223334553333221 222 33 5678
Q ss_pred HHHHHhCCCCEEEEEeCCCcccccccccccCccEEEEccCCChh--HHHHHHHHHhCC
Q 003876 533 TSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYPGEA--GAKALAEIIFGD 588 (790)
Q Consensus 533 ~~va~~~~~~vVVVl~~g~P~~l~~~~~~~~v~AiL~a~~pGqe--~g~AiAdVL~G~ 588 (790)
+++.+. +.=.-+|+. |+||.+.|+. +..+.|-|+|.+||. +..-+...|++.
T Consensus 470 ~~l~~~-~~~~~~~~y-g~py~~~~~~--~~~~~~p~~~~~gq~~~~q~~~~~~~~~~ 523 (535)
T 3sql_A 470 QKIAAQ-IPLQGVIFY-GSPYFLEALQ--TTLPEIPWWFSYGQMAIAQAEICTSLWEE 523 (535)
T ss_dssp HHHHHH-SCEEEEEEE-ECCTTHHHHH--HHCTTSCEEEESCCSHHHHHHHHHHTCSS
T ss_pred HHHHhc-CceeEEEEe-CChhHHHHHH--HHhhcCCcccCCccCHHHHHHHHHHHhcc
Confidence 888777 443344444 8999998875 223245567778863 344445556653
No 8
>3tev_A Glycosyl hyrolase, family 3; PSI-biology, midwest center for structural genomics, structu genomic, MCSG, hydrolase; 2.30A {Deinococcus radiodurans}
Probab=100.00 E-value=5.9e-55 Score=476.11 Aligned_cols=239 Identities=18% Similarity=0.249 Sum_probs=197.4
Q ss_pred cCCCCchhhhhccccceecCCCCccccCCCCccccCchhhhhhhcCCHHHHHHHHHHHHHHHHHhhccCCCcceeeCcee
Q 003876 90 RLGIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNRSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNI 169 (790)
Q Consensus 90 rlgip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~~l~~~~g~~~g~E~ra~~~~G~~g~~~laP~~ 169 (790)
++|||++ +..|.+||. +.+ ...+|.||+++++|||||++|++++|+++|+|+|++ |+ +++ |+|++
T Consensus 70 ~~~iPll-i~~D~egG~--------v~r-~~~~t~~P~~~~laat~d~~l~~~~g~~~a~E~ra~---Gi-~~~-~aPv~ 134 (351)
T 3tev_A 70 VMGEHAL-IAIDHEGGA--------ITR-PEFWPFAPSAMSLGAADDQQLTEDVNAALARQLRSV---GI-NWN-FTPVL 134 (351)
T ss_dssp HHCTTCE-EEECC----------------------CCCHHHHHHHCCHHHHHHHHHHHHHHHHHH---TC-CEE-CCCBC
T ss_pred HhCCCCc-eeEeCCCCe--------EeC-CCCCCCCCCHHHHHhcCCHHHHHHHHHHHHHHHHHc---CC-CEe-cccee
Confidence 4689988 456666654 333 235899999999999999999999999999999999 66 444 59999
Q ss_pred cccCCCCCCCC-CCCCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccceeeccCCCCCCCCCccceeeeeccccc
Q 003876 170 NIFRDPRWGRG-QETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIA 248 (790)
Q Consensus 170 di~r~p~~gr~-~esfgeDp~l~~~~~~a~v~GlQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~a~~KHF~g 248 (790)
||.|||+|||. .|||||||+++++|+.|+|+|||+. | |++|+|||||
T Consensus 135 Dv~r~p~~~rig~RsfgeDP~lv~~~a~a~v~Glq~~----------------------------g----V~a~~KHFpG 182 (351)
T 3tev_A 135 DINVNPANPVIGDRAYGSDAARVTRHGRAALAGHTRE----------------------------G----VAPCAKHFPG 182 (351)
T ss_dssp CCCCCTTCCSSGGGSSCSSHHHHHHHHHHHHHHHHTT----------------------------T----CEECEEEETC
T ss_pred EeccCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHc----------------------------C----CeEEeeeccC
Confidence 99999999986 5799999999999999999999998 6 9999999999
Q ss_pred CCccccCCCccceeccccChhhhhhccChhHHHHHHhCCCceeeee---ccccCC-cccccCHHHHHH-HHHHhCCCcEE
Q 003876 249 YDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCS---YNQVNG-VPACLRGDLFQK-ARNEWGFKGYI 323 (790)
Q Consensus 249 ~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~~g~~~~vM~s---y~~vng-~pa~~s~~ll~~-LR~e~gF~G~V 323 (790)
||.+..++|... ..+++++++|+|+||+||+++ ++|.. +|||| ||.||| .|||+|+++|++ ||+||||+|+|
T Consensus 183 ~g~~~~dsh~~~-~~~~~s~~~L~e~~l~PF~~a-~ag~~-~VM~aHi~y~~id~~~Pa~~s~~ll~~lLR~elGF~G~V 259 (351)
T 3tev_A 183 HGDTHQDSHLAL-PRVSKSRAELDAGELAPFRAL-LPETP-AIMTAHIVYDALDAEHPATLSPRILTGLLREEWGYDGVI 259 (351)
T ss_dssp CTTCBCSSTTSC-CEECCCHHHHHHTTTHHHHHH-GGGCS-EEEECSCEETTTBSSSCGGGCHHHHCCCCCCCSCCCSEE
T ss_pred CCCCcCCCCcCC-CcCCCCHHHHHHhhhHHHHHH-hcCCC-EEEecceEecCCCCCcCccCCHHHHHHHHHhhcCCCeEE
Confidence 998876666333 346789999999999999999 87776 99999 889998 699999999999 99999999999
Q ss_pred EccchHHHHhhhccccCCCHHHHHHHHHHH-------------------------hcCCCcHHHHHHHHHHHHHHHHHhc
Q 003876 324 TSDCDAVATIFEYQNYTKTHEDSAAGVLKA-------------------------DKGKVQEKDIDRALLNLFSVQLRLG 378 (790)
Q Consensus 324 vSD~~~~~~~~~~~~~~~~~~~a~~~al~A-------------------------~~g~i~~~~id~av~Ril~~k~~~G 378 (790)
||||++|+++... .+..+++++||+| ++ ++++||+||+|||++|+++|
T Consensus 260 vSD~~~m~~i~~~----~~~~~~~~~Al~AG~D~~l~~~~~~~~~~~~~~l~~av~~---~~~~id~av~RIL~~k~~~g 332 (351)
T 3tev_A 260 VTDSMGMQAIDAN----YGRGEAAVRALRAGADLVMALGRREVQQATLAAVAEYVPE---NQAAVATKRERLRALARRFP 332 (351)
T ss_dssp EECCTTSHHHHHH----SCHHHHHHHHHHHTCSBEECCSSHHHHHHHHHHHHHHGGG---CHHHHHHHHHHHHHHHHHSC
T ss_pred EeccchHHHHHhc----CCHHHHHHHHHHcCCCEECCCCChhHHHHHHHHHHHHHhC---cHHHHHHHHHHHHHHHHHhC
Confidence 9999999988762 2456777777777 22 89999999999999999999
Q ss_pred ccCCCCCC
Q 003876 379 LFNGDPRK 386 (790)
Q Consensus 379 lf~~~p~~ 386 (790)
+|+ +||.
T Consensus 333 ~f~-~Py~ 339 (351)
T 3tev_A 333 AQA-DETL 339 (351)
T ss_dssp CCC-----
T ss_pred CCC-CCCC
Confidence 999 7754
No 9
>4g6c_A Beta-hexosaminidase 1; ssgcid, niaid, structural genomics, Na institute of allergy and infectious diseases; 1.38A {Burkholderia cenocepacia} PDB: 4gnv_A*
Probab=100.00 E-value=2.9e-48 Score=422.52 Aligned_cols=237 Identities=18% Similarity=0.196 Sum_probs=191.1
Q ss_pred cccCCCCchhhhhccccceecCCCCccccCCC-CccccCchhhhhhhcCCH------HHHHHHHHHHHHHHHHhhccCCC
Q 003876 88 IPRLGIPAYEWWSESLHGIASNGPGVNFNGTV-SSVTSFPQVLVSAASFNR------SLWSNIGSAVAVEARAMYNLGQA 160 (790)
Q Consensus 88 i~rlgip~~~~~~d~~~G~~~~~~g~~~~~~~-~~~t~fP~~~~laat~d~------~l~~~~g~~~g~E~ra~~~~G~~ 160 (790)
+.+++||++ +..|.++ +++.+.. .++|.||+++++|||||+ +|++++|+++|+|+|++ |+
T Consensus 59 i~~~~iPll-i~vD~Eg--------G~v~r~~~~g~t~fP~~~~laat~d~d~~~~~~la~~~g~~~a~El~a~---Gi- 125 (348)
T 4g6c_A 59 IRAVREDIL-IAVDHEG--------GRVQRFRTDGFTVLPAMRRLGELWDRDVLLATKVATAVGYILAAELRAC---GI- 125 (348)
T ss_dssp HHHHCTTCE-EEECEEE--------TTEESCCSTTCCCCCCHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHT---TC-
T ss_pred HHHhCCCce-EEecCCC--------CceecCCCCCCCCCCCHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHc---CC-
Confidence 456678887 4444444 4444443 468999999999999998 79999999999999999 66
Q ss_pred cceeeCceecccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccceeeccCCCCCCCCCcccee
Q 003876 161 GLTFWAPNINIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLS 240 (790)
Q Consensus 161 g~~~laP~~di~r~p~~gr~~esfgeDp~l~~~~~~a~v~GlQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~ 240 (790)
+++ |+|++||..++.+.++.|+|||||+++++|+.|+|+|||+. | |+
T Consensus 126 ~~~-~aPv~Dv~~gr~~~iG~rsfgeDP~lv~~~a~A~v~Glq~~----------------------------G----V~ 172 (348)
T 4g6c_A 126 DMS-FTPVLDLDYGHSKVIGDRAFHRDPRVVTLLAKSLNHGLSLA----------------------------G----MA 172 (348)
T ss_dssp CEE-CCCBCCCCCSCCTTTGGGSCCSSHHHHHHHHHHHHHHHHHT----------------------------T----CC
T ss_pred CEe-ecCccCCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHHhc----------------------------C----Cc
Confidence 444 59999998555555677999999999999999999999998 6 99
Q ss_pred eeecccccCCccccCCCccceeccccChhhhhhccChhHHHHHHhCCCceeeee---ccccCCcccccCHHHHHH-HHHH
Q 003876 241 ACCKHLIAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCS---YNQVNGVPACLRGDLFQK-ARNE 316 (790)
Q Consensus 241 a~~KHF~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~~g~~~~vM~s---y~~vng~pa~~s~~ll~~-LR~e 316 (790)
+|+|||||||.+..+.|.... ....+.++|++.||+||+.+ ++|.. +|||| ||.+|++|||+|+++|++ ||+|
T Consensus 173 a~~KHFpG~G~~~~dsh~~~~-v~~~~~~el~~~~l~PF~~a-~ag~~-~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~e 249 (348)
T 4g6c_A 173 NCGKHFPGHGFAEADSHVALP-TDDRTLDAILEQDVAPYDWL-GLSLA-AVIPAHVIYTQVDKRPAGFSRVWLQDILRGK 249 (348)
T ss_dssp CCEEEETCSSSCCC----CCC-EECCCHHHHHHTTSHHHHHH-GGGCC-EEEECSCEETTTCSSCGGGCHHHHCCCCCCC
T ss_pred eeeCCCCCCCCccCCCCCCCC-cCCCCHHHHHHHHHHHHHHH-hcCCC-eEEecceeecCCCCccccCCHHHHHHHHhhc
Confidence 999999999988766664322 23456778888899999999 88866 99999 999999999999999999 9999
Q ss_pred hCCCcEEEccchHHHHhhhccccCCCHHHHHHHHHHH-------hc---------CCCcHHHHHHHHHHHHHHHHHh
Q 003876 317 WGFKGYITSDCDAVATIFEYQNYTKTHEDSAAGVLKA-------DK---------GKVQEKDIDRALLNLFSVQLRL 377 (790)
Q Consensus 317 ~gF~G~VvSD~~~~~~~~~~~~~~~~~~~a~~~al~A-------~~---------g~i~~~~id~av~Ril~~k~~~ 377 (790)
|||+|+|||||++|.++.. ..+..+++++||+| -+ ..+..++++++++||++++.|.
T Consensus 250 lGF~G~VvSD~l~m~~~~~----~~~~~e~a~~Al~AG~Dm~l~~~~~~~~~~~~~al~~~~~~~~~~Ri~~l~~r~ 322 (348)
T 4g6c_A 250 LGFTGAIFSDDLSMEAARE----GGTLTQAADAALAAGCDMVLVCNQPDAAEVVLNGLKARASAESVRRIKRMRARG 322 (348)
T ss_dssp SCCCSEEEEEETTCGGGGT----TCCHHHHHHHHHHHTCSEEECCSCHHHHHHHHHHCCC--CHHHHHHHHTTSCCS
T ss_pred cCCCeEEEccCCchhhhhh----cCCHHHHHHHHHHcCCCEECCCCChHHHHHHHHHhhcccchHHHHHHHHHHhcc
Confidence 9999999999999987643 56788999999999 00 0123356789999999987653
No 10
>4gvf_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: NDG NAG MES; 1.35A {Salmonella enterica subsp} PDB: 4gvg_A* 4gvh_A* 4gvi_A*
Probab=100.00 E-value=5.4e-48 Score=420.04 Aligned_cols=209 Identities=20% Similarity=0.189 Sum_probs=180.1
Q ss_pred CCCchhhhhccccceecCCCCccccCCCCccccCchhhhhhhcCCH----HHHHHHHHHHHHHHHHhhccCCCcceeeCc
Q 003876 92 GIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFNR----SLWSNIGSAVAVEARAMYNLGQAGLTFWAP 167 (790)
Q Consensus 92 gip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d~----~l~~~~g~~~g~E~ra~~~~G~~g~~~laP 167 (790)
+||++ +..|.+| +++++...++|.||+++++|||||+ +|++++|+++|+|+|++ |+ +++ |+|
T Consensus 54 ~iPll-i~vD~eg--------G~v~r~~~g~t~fP~~~~lgat~d~~~~~~la~~~g~~~a~Elra~---Gi-n~~-faP 119 (349)
T 4gvf_A 54 RNHLV-VAVDQEG--------GRVQRFREGFTRLPAAQSFFALHGLEEGGRLAQEAGWLMASEMIAM---DI-DIS-FAP 119 (349)
T ss_dssp SSCCE-EEECEEE--------TTEESCCTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---TC-CEE-CCC
T ss_pred CCCce-eeecCCC--------ceeeccCCCCCCCccHHHHHHhcCcchHHHHHHHHHHHHHHHHHHc---CC-CEE-ecC
Confidence 68887 4445444 4444544578999999999999999 89999999999999999 66 454 599
Q ss_pred eecccC-CCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccceeeccCCCCCCCCCccceeeeeccc
Q 003876 168 NINIFR-DPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHL 246 (790)
Q Consensus 168 ~~di~r-~p~~gr~~esfgeDp~l~~~~~~a~v~GlQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~a~~KHF 246 (790)
++||.| +|.| ++|||||||+++++|+.|+|+|||+. | |++|+|||
T Consensus 120 v~Dv~r~~~~i--g~rsfgeDP~lv~~~a~a~v~Glq~~----------------------------G----V~a~~KHF 165 (349)
T 4gvf_A 120 VLDVGHISAAI--GERSYHADPAKALAMATRFIDGMHDA----------------------------G----MKTTGKHF 165 (349)
T ss_dssp BCCCCSCCTTT--GGGSSCSSHHHHHHHHHHHHHHHHHH----------------------------T----CCCEEEEE
T ss_pred cccCCCCCCCC--cCcCCCCCHHHHHHHHHHHHHHHHHc----------------------------C----ceeeeccc
Confidence 999998 4655 58999999999999999999999998 6 99999999
Q ss_pred ccCCccccCCCccceeccccChhhhhhccChhHHHHHHhCCCceeeee---ccccCCcccccCHHHHHH-HHHHhCCCcE
Q 003876 247 IAYDLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCS---YNQVNGVPACLRGDLFQK-ARNEWGFKGY 322 (790)
Q Consensus 247 ~g~g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~~g~~~~vM~s---y~~vng~pa~~s~~ll~~-LR~e~gF~G~ 322 (790)
||||.+..++|...+ ....+.++|+|.||+||+.+|++|.+.+|||| ||.||++|||+|+++|++ ||+||||+|+
T Consensus 166 pG~G~~~~dsh~~~~-v~~~s~~el~~~~l~PF~~aI~~g~~~~VM~aHv~y~~id~~Pa~~S~~ll~~lLR~elGF~G~ 244 (349)
T 4gvf_A 166 PGHGAVTADSHKETP-CDPRPETDIRGKDMSVFRTLISENKLDAIMPAHVIYRAIDPRPASGSPYWLKTVLRQELGFDGV 244 (349)
T ss_dssp TCCTTCCCCSSSSCC-BCCCCHHHHHHTHHHHHHHHHHTTCCSEEEECSCBCTTTCSSCGGGCHHHHCCCCCCCTCCCSE
T ss_pred ccCCCcccCCCCCCC-CCCcCHHHHHHHHhHHHHHHHHcCCCCeEeecccccCCCCCCCCcCCHHHHHHHHHHhcCCCEE
Confidence 999998777664332 23567889999999999999999955599999 999999999999999999 9999999999
Q ss_pred EEccchHHHHhhhccccCCCHHHHHHHHHHH
Q 003876 323 ITSDCDAVATIFEYQNYTKTHEDSAAGVLKA 353 (790)
Q Consensus 323 VvSD~~~~~~~~~~~~~~~~~~~a~~~al~A 353 (790)
|||||++|.++.. ..+..+++++||+|
T Consensus 245 VvSD~l~m~~~~~----~~~~~eaa~~Al~A 271 (349)
T 4gvf_A 245 IFSDDLSMEGAAI----MGSYAERAQASLDA 271 (349)
T ss_dssp EEEEEGGGCCCGG----GCCHHHHHHHHHHH
T ss_pred EEecCCccccccc----cCCHHHHHHHHHHc
Confidence 9999999987543 55788999999998
No 11
>2oxn_A Beta-hexosaminidase; TIM-barrel, hydrolase; HET: OAN; 1.70A {Vibrio cholerae} PDB: 3gs6_A* 3gsm_A* 1y65_A* 1tr9_A
Probab=100.00 E-value=1e-47 Score=417.43 Aligned_cols=206 Identities=19% Similarity=0.175 Sum_probs=177.7
Q ss_pred CCCchhhhhccccceecCCCCccccCCCCccccCchhhhhhhcCC--HHHHHHHHHHHHHHHHHhhccCCCcceeeCcee
Q 003876 92 GIPAYEWWSESLHGIASNGPGVNFNGTVSSVTSFPQVLVSAASFN--RSLWSNIGSAVAVEARAMYNLGQAGLTFWAPNI 169 (790)
Q Consensus 92 gip~~~~~~d~~~G~~~~~~g~~~~~~~~~~t~fP~~~~laat~d--~~l~~~~g~~~g~E~ra~~~~G~~g~~~laP~~ 169 (790)
+||++ +..|.+|| ++++...++|.||+++++|| || ++|++++|+++|+|+|++ |+ +++ |+|++
T Consensus 54 ~iPll-i~~D~egG--------~v~r~~~~~t~fP~~~~laa-~d~~~~la~~~g~~~a~E~ra~---Gi-~~~-~aPv~ 118 (340)
T 2oxn_A 54 KRPIL-IGVDQEGG--------RVQRFREGFSRIPPAQYYAR-AENGVELAEQGGWLMAAELIAH---DV-DLS-FAPVL 118 (340)
T ss_dssp SSCCE-EEECEEET--------TEESCCTTSCCCCCGGGGGG-STTHHHHHHHHHHHHHHHHHTT---TC-CEE-CCCBC
T ss_pred CCCeE-eeecCCCe--------eEeccCCCCCCCCCHHHHhC-CCcHHHHHHHHHHHHHHHHHHh---CC-CEE-ecCcc
Confidence 68887 44555554 44444456999999999999 99 999999999999999999 66 454 59999
Q ss_pred cccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhhcCCCCCCCCCCCcccccceeeccCCCCCCCCCccceeeeecccccC
Q 003876 170 NIFRDPRWGRGQETPGEDPMVVSAYAVEFVKSFQGENWKSDDGGIGFGFREKRVLKGFGEESDRGDELMLSACCKHLIAY 249 (790)
Q Consensus 170 di~r~p~~gr~~esfgeDp~l~~~~~~a~v~GlQ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~v~a~~KHF~g~ 249 (790)
||.|+ +|.|+.|+|||||+++++|+.|+|+|||+. | |++|+||||||
T Consensus 119 Dv~~~-~~~ig~rsfgeDP~lv~~~a~a~v~Glq~~----------------------------g----V~a~~KHFpG~ 165 (340)
T 2oxn_A 119 DMGFA-CKAIGNRAFGEDVQTVLKHSSAFLRGMKAV----------------------------G----MATTGKHFPGH 165 (340)
T ss_dssp CCCSC-STTTGGGSSCSSHHHHHHHHHHHHHHHHHT----------------------------T----CCCEEEEETCC
T ss_pred CCCCC-CCcCcCCCCCCCHHHHHHHHHHHHHHHHHC----------------------------C----ceeeeccCcCC
Confidence 99999 888999999999999999999999999998 6 99999999999
Q ss_pred CccccCCCccceeccccChhhhhhccChhHHHHHHhCCCceeeee---ccccCCcccccCHHHHHH-HHHHhCCCcEEEc
Q 003876 250 DLEKWGNFSRYSFNAMITEQDTEDTFQPPFRSCIEQGKASCIMCS---YNQVNGVPACLRGDLFQK-ARNEWGFKGYITS 325 (790)
Q Consensus 250 g~~~~~~~~r~~~~~~~~~~~l~e~~l~PF~~~i~~g~~~~vM~s---y~~vng~pa~~s~~ll~~-LR~e~gF~G~VvS 325 (790)
|.+..+.|...+ ..+.++| |.||+||+.+|++|.+.+|||| ||.||++|||+|+++|++ ||+||||+|+|||
T Consensus 166 G~~~~dsh~~~~---v~~~~~l-~~~l~PF~~ai~~g~~~~VM~aHv~y~~id~~Pa~~s~~ll~~lLR~elGF~G~VvS 241 (340)
T 2oxn_A 166 GAVIADSHLETP---YDERETI-AQDMAIFRAQIEAGVLDAMMPAHVVYPHYDAQPASGSSYWLKQVLREELGFKGIVFS 241 (340)
T ss_dssp TTCCSCCSSSSC---BCCCSCC-HHHHHHHHHHHHHTCCSEEEECSCBBTTTBSSCGGGCHHHHTCCCCCCTCCCSEEEE
T ss_pred CCccCCCCCCCc---cCCHHHH-HHHHHHHHHHHHcCCCCeeeeccccccccCCcCcccCHHHHHHHhhcccCCCeEEEc
Confidence 988766553322 1233889 9999999999999944599999 999999999999999999 9999999999999
Q ss_pred cchHHHHhhhccccCCCHHHHHHHHHHH
Q 003876 326 DCDAVATIFEYQNYTKTHEDSAAGVLKA 353 (790)
Q Consensus 326 D~~~~~~~~~~~~~~~~~~~a~~~al~A 353 (790)
||++|+++.. ..+..+++++||+|
T Consensus 242 D~l~m~~~~~----~~~~~ea~~~Al~A 265 (340)
T 2oxn_A 242 DDLSMEGAAV----MGGPVERSHQALVA 265 (340)
T ss_dssp EEGGGSCHHH----HCSHHHHHHHHHHH
T ss_pred ccchhhhhhc----cCCHHHHHHHHHHc
Confidence 9999987653 35778999999998
No 12
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=95.95 E-value=0.021 Score=52.98 Aligned_cols=51 Identities=22% Similarity=0.198 Sum_probs=40.1
Q ss_pred ceEEEEEEEEecCCCC-CceEEEEEEecCCCCCCccccccccccccccCCCCEEEEEEEecC
Q 003876 694 LRFHVQISVTNAGDVD-GSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDP 754 (790)
Q Consensus 694 ~~v~vsv~VtNtG~~~-G~eVvQlY~~~p~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 754 (790)
+.++++|+|+|.|..+ +.--|.||+... +.+-+-+.|+||++++|+|++.+
T Consensus 33 ~~~ti~vtV~N~G~~~a~~~~V~lyvng~----------~v~t~~v~La~G~s~tv~f~~~~ 84 (127)
T 3idu_A 33 KLAEYEVHVKNLGGIGVPSTKVRVYINGT----------LYKNWTVSLGPKEEKVLTFNWTP 84 (127)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEEEEETTE----------EEEEEEEEECTTCEEEEEEEECC
T ss_pred CEEEEEEEEEECCCCccCCcEEEEEECCE----------EEeeEEeccCCCCeEEEEEEEEc
Confidence 5799999999999875 667789998432 22333457999999999999986
No 13
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=94.50 E-value=0.12 Score=46.96 Aligned_cols=51 Identities=16% Similarity=0.165 Sum_probs=41.2
Q ss_pred ceEEEEEEEEecCCC-CCceEEEEEEecCCCCCCcccccccccccc-ccCCCCEEEEEEEecC
Q 003876 694 LRFHVQISVTNAGDV-DGSHVVMLFARVPKVSQGTPEKQLIGFDRV-HTVAKGSKEISFGVDP 754 (790)
Q Consensus 694 ~~v~vsv~VtNtG~~-~G~eVvQlY~~~p~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~~ 754 (790)
+.++++++|+|.|.. ++.-.|-+|+.. .+.+...| .|.+|++++|+|+..+
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly~~g----------~~v~t~~v~~LaaG~s~tv~~~w~~ 71 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLLVDG----------IVVDTQTVTSLESENSTNVDFHWTL 71 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEETT----------EEEEEEEESCBCBTCEEEEEEEEEC
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEEECC----------EEEcceecccccCCCEEEEEEEEee
Confidence 578999999999975 577788899853 25566677 5999999999998765
No 14
>2kut_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Geobacter metallireducens}
Probab=94.13 E-value=0.053 Score=49.75 Aligned_cols=55 Identities=20% Similarity=0.185 Sum_probs=40.8
Q ss_pred ceEEEEEEEEecCCC-CCceEEEEEEecCCCCCCcccccccccccc-ccCCCCEEEEEEEec
Q 003876 694 LRFHVQISVTNAGDV-DGSHVVMLFARVPKVSQGTPEKQLIGFDRV-HTVAKGSKEISFGVD 753 (790)
Q Consensus 694 ~~v~vsv~VtNtG~~-~G~eVvQlY~~~p~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~ 753 (790)
+.++|+++|+|.|.. ++.--|.+|+..|.... .+.|-..| .|+||++.+++|++.
T Consensus 16 ~~vTvsatVkN~Gt~~s~a~~V~~yl~~p~~gg-----~~vgt~tv~~LaaG~s~t~~v~~~ 72 (122)
T 2kut_A 16 EEITVSARVTNRGAAEAHNVPVAVYLGNPAQGG-----VEIGRDTISRIPVGGTGLARVQWK 72 (122)
T ss_dssp CEEEEEEEEECCSSSCBCCCCEEECSSCTTTCC-----CCCBCCCCSCBCTTCEEECCEEEE
T ss_pred CeEEEEEEEEeCCCcccCcEEEEEEeCCCccCC-----eEEeeEEccccCCCCeEEEEEEEe
Confidence 679999999999976 56677999999875432 23344446 499999999555544
No 15
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=91.07 E-value=0.81 Score=41.75 Aligned_cols=69 Identities=13% Similarity=0.099 Sum_probs=46.6
Q ss_pred ceEEEEEEEEecCCCC-------CceEEEEEEecCCCC------CCccccccccccccccCCCCEEEEEEEecCCCCceE
Q 003876 694 LRFHVQISVTNAGDVD-------GSHVVMLFARVPKVS------QGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSI 760 (790)
Q Consensus 694 ~~v~vsv~VtNtG~~~-------G~eVvQlY~~~p~~~------~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~ 760 (790)
+.+.++++|+|.|+.+ |.- ..+.|.+.... ..+---+ .+..+.|+|||+.+.+++++.
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~-~Df~v~d~~G~~VwrwS~~~~FtQ--a~~~~tl~pGE~~~f~~~w~~------ 88 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQK-FELVVYDSEHKERYRYSKEKMFTQ--AFQNLTLESGETYDFSDVWKE------ 88 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCC-EEEEEECTTCCEEEETTTTCCCCC--CCEEEEECTTCEEEEEEEESS------
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCE-EEEEEECCCCCEEEEccccchhhh--hhceEEECCCCEEEEEEEeCC------
Confidence 5799999999999844 221 34455554331 1122222 566778999999999888871
Q ss_pred EeCCCcEEecCceEEEEE
Q 003876 761 ANKHGRRILPLGNHVLMV 778 (790)
Q Consensus 761 ~d~~~~~~~~~G~y~i~v 778 (790)
.++||.|++.+
T Consensus 89 -------~~~pG~Ytl~a 99 (120)
T 3isy_A 89 -------VPEPGTYEVKV 99 (120)
T ss_dssp -------CCCSEEEEEEE
T ss_pred -------CCCCccEEEEE
Confidence 46899999865
No 16
>4ep8_B Urease subunit beta; alpha-beta barrel, nickel metalloenzyme, hydrolase, radiatio; HET: KCX; 1.55A {Enterobacter aerogenes} PDB: 1a5l_B 1a5k_B 1a5n_B 1a5o_B 1ef2_B* 1ejr_B* 1ejs_B* 1ejt_B* 1eju_B* 1ejv_B* 1a5m_B* 1ejw_B* 1ejx_B* 4epb_B* 4epd_B* 4epe_B* 1fwa_B* 1fwb_B* 1fwc_B* 1fwd_B* ...
Probab=89.68 E-value=0.55 Score=40.95 Aligned_cols=52 Identities=15% Similarity=0.172 Sum_probs=31.9
Q ss_pred EEEEEEEEecCCCCCceEEEEEEecCCC----CCCccccccccc-------cccccCCCCEEEEEEE
Q 003876 696 FHVQISVTNAGDVDGSHVVMLFARVPKV----SQGTPEKQLIGF-------DRVHTVAKGSKEISFG 751 (790)
Q Consensus 696 v~vsv~VtNtG~~~G~eVvQlY~~~p~~----~~~~P~k~L~gF-------~kv~L~pGes~~V~~~ 751 (790)
-+++++|+|||+++ +|+=-+..-. ...--...-.|| .-|..+||++++|++.
T Consensus 20 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~r~V~LV 82 (101)
T 4ep8_B 20 ATCRVVVENHGDRP----IQVGSHYHFAEVNPALKFDRQQAAGYRLNIPAGTAVRFEPGQKREVELV 82 (101)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCTTTTTTEEECSSTTCEEEECTTCEEEEEEE
T ss_pred CEEEEEEEeCCCcc----eEEccccChhHcCcceeecHhhccCceecccCCCeEeeCCCCeEEEEEE
Confidence 46899999999998 8984332211 111111111222 3467899999999984
No 17
>4ubp_B Protein (urease (chain B)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.85.3.1 PDB: 1s3t_B* 3ubp_B* 1ie7_B* 1ubp_B* 2ubp_B*
Probab=85.53 E-value=1.1 Score=40.75 Aligned_cols=52 Identities=17% Similarity=0.117 Sum_probs=32.2
Q ss_pred EEEEEEEEecCCCCCceEEEEEEecCCCC----CCccccccccc-------cccccCCCCEEEEEEE
Q 003876 696 FHVQISVTNAGDVDGSHVVMLFARVPKVS----QGTPEKQLIGF-------DRVHTVAKGSKEISFG 751 (790)
Q Consensus 696 v~vsv~VtNtG~~~G~eVvQlY~~~p~~~----~~~P~k~L~gF-------~kv~L~pGes~~V~~~ 751 (790)
-+++++|+|||+++ +|+=-+..-.. ..--...-.|| .-|..+||++++|++.
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ubp_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 46899999999998 89843322111 11111111222 3467899999999984
No 18
>4ac7_B Urease subunit beta; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_B* 3ubp_B* 1ie7_B* 4ubp_B* 1ubp_B* 2ubp_B*
Probab=85.53 E-value=1.1 Score=40.75 Aligned_cols=52 Identities=17% Similarity=0.117 Sum_probs=32.2
Q ss_pred EEEEEEEEecCCCCCceEEEEEEecCCCC----CCccccccccc-------cccccCCCCEEEEEEE
Q 003876 696 FHVQISVTNAGDVDGSHVVMLFARVPKVS----QGTPEKQLIGF-------DRVHTVAKGSKEISFG 751 (790)
Q Consensus 696 v~vsv~VtNtG~~~G~eVvQlY~~~p~~~----~~~P~k~L~gF-------~kv~L~pGes~~V~~~ 751 (790)
-+++++|+|||+++ +|+=-+..-.. ..--...-.|| .-|..+||++++|++.
T Consensus 26 ~~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 88 (126)
T 4ac7_B 26 EKTTIRVSNTGDRP----IQVGSHIHFVEVNKELLFDRAEGIGRRLNIPSGTAARFEPGEEMEVELT 88 (126)
T ss_dssp CEEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred cEEEEEEEeCCCCC----EEEccccchhhcCchhhccHhhhcCccccccCCCeEeeCCCCeEEEEEE
Confidence 46899999999998 89843322111 11111111222 3467899999999984
No 19
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=81.72 E-value=2.7 Score=48.35 Aligned_cols=52 Identities=15% Similarity=0.035 Sum_probs=37.9
Q ss_pred ceEEEEEEEEecCC--CCCceEEEEEEecCCCCCCccccccccccccccCCCCEEEEEEEecCC
Q 003876 694 LRFHVQISVTNAGD--VDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPC 755 (790)
Q Consensus 694 ~~v~vsv~VtNtG~--~~G~eVvQlY~~~p~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~ 755 (790)
++.+|+++|+|.+. ++|.+++ ||+..-... .+ .-..++|||+.+|.|+|...
T Consensus 373 ~~~~~~~~vtn~~~~~~~~~~~~-~~~~~~~~~--------~~-~~~~~~~g~~~t~~~~vt~~ 426 (601)
T 1w8o_A 373 QQVTVPVAVTNQSGIAVPKPSLQ-LDASPDWQV--------QG-SVEPLMPGRQAKGQVTITVP 426 (601)
T ss_dssp CEEEEEEEEECCSSSCBSSCEEE-EECCTTSEE--------EE-EECCBCTTCEEEEEEEEECC
T ss_pred ceeEEEEEEECCCceeccCceEE-EecCCCcEE--------ec-cccccCCCCceEEEEEEecC
Confidence 47899999999977 7898877 887332221 11 22678999999998888773
No 20
>1yew_A Particulate methane monooxygenase, B subunit; membrane protein, beta barrel, oxidoreductase; 2.80A {Methylococcus capsulatus} PDB: 3rgb_A
Probab=73.20 E-value=7.4 Score=41.63 Aligned_cols=56 Identities=16% Similarity=0.326 Sum_probs=36.3
Q ss_pred ceEEEEEEEEecCCCCCceEEEE---------EEecCC--CCCCcccccccccccc------ccCCCCEEEEEEEecC
Q 003876 694 LRFHVQISVTNAGDVDGSHVVML---------FARVPK--VSQGTPEKQLIGFDRV------HTVAKGSKEISFGVDP 754 (790)
Q Consensus 694 ~~v~vsv~VtNtG~~~G~eVvQl---------Y~~~p~--~~~~~P~k~L~gF~kv------~L~pGes~~V~~~l~~ 754 (790)
.+++++++|||.|+-+ |+| |+.+.. .....| .+|.+.+.. -++|||+++|+++...
T Consensus 264 R~l~~~~~VtN~g~~p----vrlgeF~tA~vrFln~~~~~~~~~~P-~~lla~~gL~vsd~~pI~PGETr~~~v~a~d 336 (382)
T 1yew_A 264 RAMRMKLTITNHGNSP----IRLGEFYTASVRFLDSDVYKDTTGYP-EDLLAEDGLSVSDNSPLAPGETRTVDVTASD 336 (382)
T ss_dssp SEEEEEEEEEECSSSC----EEEEEEECSSCEEECTTTCCCCSCCC-GGGEETTCEEESCCSCBCTTCEEEEEEEEEC
T ss_pred cEEEEEEEEEcCCCCc----eEeeeEEeccEEEeCCcccccCCCCh-HHhhccCCceeCCCCCcCCCceeEEEEEeeh
Confidence 5799999999987644 666 333211 112233 466654432 2999999999998863
No 21
>3qga_A UREA2, fusion of urease beta and gamma subunits; iron metalloenzyme, alpha-beta barrel, hydrolase; HET: FME KCX; 3.00A {Helicobacter mustelae} PDB: 3qgk_A*
Probab=72.55 E-value=3.5 Score=40.93 Aligned_cols=51 Identities=14% Similarity=0.118 Sum_probs=31.3
Q ss_pred EEEEEEEecCCCCCceEEEEEEecCCCCC----Cccccccccc-------cccccCCCCEEEEEEE
Q 003876 697 HVQISVTNAGDVDGSHVVMLFARVPKVSQ----GTPEKQLIGF-------DRVHTVAKGSKEISFG 751 (790)
Q Consensus 697 ~vsv~VtNtG~~~G~eVvQlY~~~p~~~~----~~P~k~L~gF-------~kv~L~pGes~~V~~~ 751 (790)
+++++|+|||+++ +|+=-+..-..+ .--...=.|| .-|..+||++++|++.
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTavRFEPG~~k~V~LV 187 (225)
T 3qga_A 126 ITELKVTNKGPKS----LHVGSHFHFFEANRALEFDREKAYGKRLDIPSGNTLRIGAGETKTVHLI 187 (225)
T ss_dssp CEEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred eEEEEEEECCCCc----eeeccccchhhcCchhhccHHHhCCcccccCCCCeEeeCCCCeeEEEEE
Confidence 5899999999998 888433221111 1111111222 3466899999999984
No 22
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=69.82 E-value=5.2 Score=35.13 Aligned_cols=69 Identities=10% Similarity=-0.012 Sum_probs=40.5
Q ss_pred ceEEEEEEEEecCCCCCceEEEEEEecCCCCCCccccccccccccccCCCCEEEEEEEecCCCCceEEeCCCcEEe
Q 003876 694 LRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRIL 769 (790)
Q Consensus 694 ~~v~vsv~VtNtG~~~G~eVvQlY~~~p~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~ 769 (790)
...+.+++++|+|+....- -+......- ...--....+-.|+||++.+|++++.+ +....++..-.+.+
T Consensus 26 ~~~~~~~~l~N~g~~p~~~----~~~~~~~~~--~~~f~v~p~~g~i~pg~~~~i~V~f~~-~~~g~f~~~i~v~~ 94 (112)
T 2e6j_A 26 SAHCYEAILYNKGSIDALF----NMTPPTSAL--GACFVFSPKEGIIEPSGVQAIQISFSS-IILGNFEEEFLVNV 94 (112)
T ss_dssp CCEEEEEEEEECCSSCEEE----EECCCSSHH--HHHCEEESSEEEECTTBCCEEEEEECC-CCCEEEEEEECEEE
T ss_pred CEEEEEEEEEECCcceEEE----EEecCCccc--cCcEEEECCcCEECCCCEEEEEEEEEC-CCcceEEEEEEEEE
Confidence 3467899999999985321 111111100 000001233456999999999999998 46777765433333
No 23
>2x3c_A Toxic extracellular endopeptidase; hydrolase; 1.99A {Aeromonas salmonicida subsp} PDB: 2x3a_A 2x3b_A
Probab=69.03 E-value=6.3 Score=42.43 Aligned_cols=63 Identities=16% Similarity=0.078 Sum_probs=34.9
Q ss_pred eEEEEEEEEecCCCCC------------ceEEEEEEec---CCCCC--CccccccccccccccCCCCEEEEEEEecCCCC
Q 003876 695 RFHVQISVTNAGDVDG------------SHVVMLFARV---PKVSQ--GTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQ 757 (790)
Q Consensus 695 ~v~vsv~VtNtG~~~G------------~eVvQlY~~~---p~~~~--~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ 757 (790)
.+.|+++|||+|+.+= .+.++++-.. |...+ .+..-.+..| +.|+||||.+++|+|..-.+
T Consensus 37 ~~~vk~tvtN~g~~~~~lLk~~~lD~~~~~~~~V~~~G~~v~f~Gi~~~~~~~~~d~f--~~L~pG~Sve~~~dla~~yd 114 (343)
T 2x3c_A 37 DVRVNLTLTNTGDKPIRLLKWQLPGSDDAPLFLVERDGQPVSYEGALIKRAAPTDKDF--QLLKAGQSLTVQAEVSGLYD 114 (343)
T ss_dssp CCEEEEEEEECSSSCEEEEGGGSCSSSCCCCEEEEETTEECCBCSCCCCCCCCCGGGE--EEECTTCEEEEEEECTTTBT
T ss_pred CeEEEEEEEeCCCCceEeeccCCCCcCccceEEEEeCCcccceeeEEEeccCCChhhc--EEeCCCCeEEEEEehhhccc
Confidence 4789999999998541 1233443110 11110 0111112222 35999999999999975444
Q ss_pred ce
Q 003876 758 LS 759 (790)
Q Consensus 758 ls 759 (790)
|+
T Consensus 115 Ls 116 (343)
T 2x3c_A 115 MS 116 (343)
T ss_dssp CC
T ss_pred cC
Confidence 54
No 24
>3fsa_A Azurin; copper, cupredoxin fold, metal-binding, protein-protein interaction, metal binding protein; 0.98A {Pseudomonas aeruginosa} SCOP: b.6.1.1 PDB: 2xv2_A 2xv0_A 3fs9_A 2fta_A* 2hx7_A 2hx8_A 2hx9_A 2hxa_A 1cc3_A 2ft6_A 2ft7_A 2ft8_A 1azn_A 3n2j_A 2iwe_A 2ghz_A 2gi0_A 1jzg_A* 1azu_A* 1bex_A ...
Probab=67.41 E-value=5 Score=36.77 Aligned_cols=69 Identities=14% Similarity=0.205 Sum_probs=38.9
Q ss_pred EEEEEEEecCCCC----CceEEEEEEecCCCC----C-Ccccc--------ccccccccccCCCCEEEEEEEec---CCC
Q 003876 697 HVQISVTNAGDVD----GSHVVMLFARVPKVS----Q-GTPEK--------QLIGFDRVHTVAKGSKEISFGVD---PCE 756 (790)
Q Consensus 697 ~vsv~VtNtG~~~----G~eVvQlY~~~p~~~----~-~~P~k--------~L~gF~kv~L~pGes~~V~~~l~---~~~ 756 (790)
+|+++++|+|+++ |-++|-.=-.....- . .-|.. +...-.+ .|.|||+.+|+|+.+ ..-
T Consensus 28 ~V~~~l~N~G~~p~~~M~Hn~Vl~~~~~~~~~~~~~m~~~~~~~y~~~~d~~via~t~-~l~pGes~~vtf~~~~l~~~G 106 (125)
T 3fsa_A 28 QFTVNLSHPGNLPKNVMGHNWVLSTAADMQGVVTDGMASGLDKDYLKPDDSRVIAHTK-LIGSGEKDSVTFDVSKLKEGE 106 (125)
T ss_dssp EEEEEEECCSSCCHHHHCBCCEEEEHHHHHHHHHHHHHHCGGGTTSCTTCTTCCEECC-CBCTTCEEEEEEEGGGC---C
T ss_pred EEEEEEEECCcccccccCceEEEcccchHHHHHHHHHhcChhhccCCCCCccceeccc-eeCCCcEEEEEEeCcCcCCCc
Confidence 5889999999998 888887621111100 0 01111 1111122 289999999999987 212
Q ss_pred CceEEeCCCcE
Q 003876 757 QLSIANKHGRR 767 (790)
Q Consensus 757 ~ls~~d~~~~~ 767 (790)
++.|+=. +.|
T Consensus 107 ~y~f~C~-gH~ 116 (125)
T 3fsa_A 107 QYMFFCA-AHA 116 (125)
T ss_dssp CEEEECS-SST
T ss_pred cEEEEcC-CCC
Confidence 3555543 444
No 25
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=66.47 E-value=6.9 Score=35.19 Aligned_cols=67 Identities=13% Similarity=0.060 Sum_probs=42.5
Q ss_pred ceEEEEEEEEecCCCCCceEEEEEEecCCCCCCccccccccccccccCCCCEEEEEEEecCCCCceEEeCCCcEEecCc
Q 003876 694 LRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDPCEQLSIANKHGRRILPLG 772 (790)
Q Consensus 694 ~~v~vsv~VtNtG~~~G~eVvQlY~~~p~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~~~~ls~~d~~~~~~~~~G 772 (790)
..-+.++.|+|+|+.+++--... ..|- ++ .|. +-.|+|||+.+|++++.+. ....|+..-.-.++.|
T Consensus 41 ~~~~~~~~l~N~g~~~~~f~~~~--~~~F-~i-~P~-------~g~L~pg~~~~i~V~F~P~-~~g~~~~~l~v~~~~g 107 (122)
T 2ys4_A 41 YSTQKILLVRNIGNKNAVFHIKT--CRPF-SI-EPA-------IGTLNVGESMQLEVEFEPQ-SVGDHSGRLIVCYDTG 107 (122)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEC--CTTE-EE-ESS-------EEEECTTCEEEEEEEECCS-SSBCCCCBCEEEESSS
T ss_pred CeEEEEEEEEECCCCCEEEEEec--CCCe-EE-ECC-------cCEECCCCEEEEEEEEEcC-CCccEEEEEEEEECCC
Confidence 35678999999999876532221 1100 11 232 2469999999999999994 5666665444444444
No 26
>1cuo_A Protein (azurin ISO-2); beta barrel, periplasmic, electron transport; 1.60A {Methylomonas SP} SCOP: b.6.1.1 PDB: 1uat_A
Probab=60.14 E-value=11 Score=34.58 Aligned_cols=25 Identities=12% Similarity=0.033 Sum_probs=18.0
Q ss_pred ccCCCCEEEEEEEec---CCCCceEEeC
Q 003876 739 HTVAKGSKEISFGVD---PCEQLSIANK 763 (790)
Q Consensus 739 ~L~pGes~~V~~~l~---~~~~ls~~d~ 763 (790)
.|.|||+.+|+|+++ ..-.+.||-.
T Consensus 86 ~l~pGet~svtf~~~~~~~~G~Y~f~C~ 113 (129)
T 1cuo_A 86 IIGGGEKTSVKFKVSALSKDEAYTYFCS 113 (129)
T ss_dssp CBCTTCEEEEEEEGGGCCTTSCEEEECC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeC
Confidence 489999999999985 2134566643
No 27
>1nwp_A Azurin; electron transport, cupredoxin, electron transfer; 1.60A {Pseudomonas putida} SCOP: b.6.1.1 PDB: 1nwo_A 1joi_A
Probab=60.07 E-value=14 Score=33.84 Aligned_cols=25 Identities=16% Similarity=0.159 Sum_probs=18.8
Q ss_pred ccCCCCEEEEEEEec---CCCCceEEeC
Q 003876 739 HTVAKGSKEISFGVD---PCEQLSIANK 763 (790)
Q Consensus 739 ~L~pGes~~V~~~l~---~~~~ls~~d~ 763 (790)
.|.|||+.+|+|+.+ +..++.||-.
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~ 113 (128)
T 1nwp_A 86 VIGAGEKDSVTFDVSKLAAGEKYGFFCS 113 (128)
T ss_dssp CBCTTCEEEEEEEGGGSCTTSCEEEECC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEEC
Confidence 489999999999985 3234777754
No 28
>2ccw_A Azurin II, AZN-2; electron transport (cuproprotein), alcaligenes xylosoxidans, electron transfer, cupredoxin, electron transport; 1.13A {Alcaligenes xylosoxydans} SCOP: b.6.1.1 PDB: 1dz0_A 1dyz_A 1aiz_A 1azb_A 1azc_A 1uri_A 2aza_A 1a4a_A 1a4b_A 1a4c_A
Probab=59.99 E-value=12 Score=34.29 Aligned_cols=25 Identities=16% Similarity=0.138 Sum_probs=18.2
Q ss_pred ccCCCCEEEEEEEec---CCCCceEEeC
Q 003876 739 HTVAKGSKEISFGVD---PCEQLSIANK 763 (790)
Q Consensus 739 ~L~pGes~~V~~~l~---~~~~ls~~d~ 763 (790)
.|.|||+.+|+|+.+ +..++.||-.
T Consensus 86 ~l~pGet~svtf~~~~l~~G~~Y~f~C~ 113 (129)
T 2ccw_A 86 VIGGGESDSVTFDVSKIAAGENYAYFCS 113 (129)
T ss_dssp CBCTTCEEEEEEEGGGSCTTCCEEEECC
T ss_pred EECCCCEEEEEEeccccCCCceEEEEeC
Confidence 489999999999986 2123666643
No 29
>2iaa_C Azurin; quinoprotein, tryptophan tryptophylquinone, cupredoxin, electron transfer, oxidoreductase/electron transport comple; HET: TRQ; 1.95A {Alcaligenes faecalis} PDB: 2h47_C* 2h3x_C*
Probab=59.89 E-value=13 Score=34.08 Aligned_cols=25 Identities=12% Similarity=0.143 Sum_probs=18.6
Q ss_pred ccCCCCEEEEEEEec---CCCCceEEeC
Q 003876 739 HTVAKGSKEISFGVD---PCEQLSIANK 763 (790)
Q Consensus 739 ~L~pGes~~V~~~l~---~~~~ls~~d~ 763 (790)
.|.|||+.+|+|+++ +..++.||-.
T Consensus 85 ~l~pGes~~vtf~~~~l~~G~~Y~f~C~ 112 (128)
T 2iaa_C 85 VIGGGETDSVTFDVSKLKEGEDYAFFCS 112 (128)
T ss_dssp CBCTTCEEEEEEESSCCCTTCCEEEECC
T ss_pred eeCCCCEEEEEEeccccCCCceEEEEEC
Confidence 489999999999985 3224677754
No 30
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=58.74 E-value=8.5 Score=47.01 Aligned_cols=60 Identities=18% Similarity=0.209 Sum_probs=37.9
Q ss_pred ceEEEEEEEEecCCCCCceEEEEEEec--C-CCCC-Cccccccccc--cccccCCCCEEEEEEEecC
Q 003876 694 LRFHVQISVTNAGDVDGSHVVMLFARV--P-KVSQ-GTPEKQLIGF--DRVHTVAKGSKEISFGVDP 754 (790)
Q Consensus 694 ~~v~vsv~VtNtG~~~G~eVvQlY~~~--p-~~~~-~~P~k~L~gF--~kv~L~pGes~~V~~~l~~ 754 (790)
..++++++|+|.|..+.....++-+.. | ...+ ..|. .|.-+ +.+.|+|||+++++++++.
T Consensus 499 ~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~-~l~~~~~~~vtv~ag~~~~~~vt~~~ 564 (926)
T 1xf1_A 499 DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK-VLYETSWQKITIPANSSKQVTVPIDA 564 (926)
T ss_dssp SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE-EEEECCCEEEEECTTEEEEEEEEEEC
T ss_pred ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc-eeEeccCCeEEECCCCEEEEEEEEEc
Confidence 367899999999986644433332321 2 1111 1343 34323 4578999999999999986
No 31
>1e9y_A Urease subunit alpha; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.85.3.1 d.8.1.1 PDB: 1e9z_A*
Probab=57.15 E-value=8.2 Score=38.63 Aligned_cols=52 Identities=17% Similarity=0.134 Sum_probs=32.2
Q ss_pred EEEEEEEecCCCCCceEEEEEEecCCCC----CCccccccccc-------cccccCCCCEEEEEEEe
Q 003876 697 HVQISVTNAGDVDGSHVVMLFARVPKVS----QGTPEKQLIGF-------DRVHTVAKGSKEISFGV 752 (790)
Q Consensus 697 ~vsv~VtNtG~~~G~eVvQlY~~~p~~~----~~~P~k~L~gF-------~kv~L~pGes~~V~~~l 752 (790)
+++++|+|||+++ +|+=-+..-.. ..--...=.|| .-|..+||++++|++.-
T Consensus 126 ~~~l~V~NtGDRP----IQVGSHyHF~E~N~aL~FDR~~A~G~RLdIpAGTAVRFEPG~~r~V~LV~ 188 (238)
T 1e9y_A 126 AVSVKVKNVGDRP----VQIGSHFHFFEVNRCLDFDREKTFGKRLDIAAGTAVRFEPGEEKSVELID 188 (238)
T ss_dssp CCEEEEEECSSSC----EEEETTSCGGGSCTTEESCGGGGTTEEECSSTTCEEEECTTCEEEEEEEE
T ss_pred eEEEEEEeCCCCc----eEeccccchHhcCccccccHHHhCCcccCcCCCCeEeeCCCCeeEEEEEE
Confidence 5889999999998 89843332211 11111112222 34678999999999853
No 32
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=56.32 E-value=21 Score=38.63 Aligned_cols=56 Identities=21% Similarity=0.255 Sum_probs=34.5
Q ss_pred ceEEEEEEEEecCCCCCceEEEE--EE----ecCCCCC----Cccccccc---c--ccccccCCCCEEEEEEEecC
Q 003876 694 LRFHVQISVTNAGDVDGSHVVML--FA----RVPKVSQ----GTPEKQLI---G--FDRVHTVAKGSKEISFGVDP 754 (790)
Q Consensus 694 ~~v~vsv~VtNtG~~~G~eVvQl--Y~----~~p~~~~----~~P~k~L~---g--F~kv~L~pGes~~V~~~l~~ 754 (790)
.+++++++|||.|+-+ ||| |. ++.+.++ ..-..+|. | =.. -++|||+++|++++.-
T Consensus 298 R~l~~~~~VtN~g~~p----vrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~GL~s~~-pI~PGETrt~~V~a~d 368 (419)
T 3rfr_A 298 RELTINVKVKNGTSQP----VRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRGLSNDD-VIAPGESKEIVVKIQD 368 (419)
T ss_dssp SEEEEEEEEECCSSSC----BEEEEEECSSCEEECTTTCSSCCCCCTTTEESCCCCCCC-CBCTTCEEEEEEEEEC
T ss_pred cEEEEEEEEecCCCCc----eEEeeEEEccEEEeCcccccCCCCCchhhhhccCCCCCC-CcCCCcceEEEEEeeh
Confidence 6799999999987654 555 22 2222211 01122332 2 333 6999999999998864
No 33
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=54.55 E-value=11 Score=38.26 Aligned_cols=48 Identities=15% Similarity=0.211 Sum_probs=32.5
Q ss_pred EEEecCCCCCceEEEEEEecCCCCCC-cc--------ccccccccccccCCCCEEEEEEEecC
Q 003876 701 SVTNAGDVDGSHVVMLFARVPKVSQG-TP--------EKQLIGFDRVHTVAKGSKEISFGVDP 754 (790)
Q Consensus 701 ~VtNtG~~~G~eVvQlY~~~p~~~~~-~P--------~k~L~gF~kv~L~pGes~~V~~~l~~ 754 (790)
++-|.|. |.=+|+||.+.+..... .| .+.+..+.+|.|.||||-+ |.+
T Consensus 130 diinRgG--G~L~v~Ly~~~~~~~~~~~~v~V~~DG~~~~~~aG~~i~L~PGESiT----l~P 186 (246)
T 3kmh_A 130 DIINRGG--GNLIVELWNADSNEQTADSDITVVIDGCRQKHTAGSQLRLSPGESIC----LPP 186 (246)
T ss_dssp EEEEEEE--SCEEEEEEEBCTTSSBCCSCEEEEETTEEEEECTTCEEEECTTCEEE----ECT
T ss_pred cEEecCC--CeEEEEEEecCCCccccCCCeEEecCCeEEEeCCCCEEEECCCCeEe----cCC
Confidence 3455554 57778888887663221 11 2568888999999999855 666
No 34
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=53.89 E-value=32 Score=31.73 Aligned_cols=55 Identities=16% Similarity=-0.048 Sum_probs=33.1
Q ss_pred eEEEEEEEEecCCCCCceEEEEEEecCC-CCCCccccccccc-cccccCCCCEEEEEEEecC
Q 003876 695 RFHVQISVTNAGDVDGSHVVMLFARVPK-VSQGTPEKQLIGF-DRVHTVAKGSKEISFGVDP 754 (790)
Q Consensus 695 ~v~vsv~VtNtG~~~G~eVvQlY~~~p~-~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~ 754 (790)
..+-+++|+|||.+.-. .-+..+. .....+ ..|.=. .+-.|+|||+.+|++++..
T Consensus 44 ~~~~~l~I~Ntg~vpa~----F~f~~~~~~~~~~~-~wl~v~P~~G~L~Pge~~~I~v~~~v 100 (140)
T 3qbt_B 44 LQKEKFQISNNGQVPCH----FSFIPKLNDSQYCK-PWLRAEPFEGYLEPNETVDISLDVYV 100 (140)
T ss_dssp CEEEEEEEEECSSSCEE----EEEECCTTCSSSSC-TTEEEESCEEEECTTCEEEEEEEECB
T ss_pred eeeeEEEEEcCCccceE----EEEecCCCchhhhh-HhhhcCCcccccCCCCeeEEEEEEEE
Confidence 35779999999999854 3333221 111000 111111 2346999999999999986
No 35
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=42.76 E-value=38 Score=33.62 Aligned_cols=52 Identities=23% Similarity=0.189 Sum_probs=34.3
Q ss_pred ceEEEEEEEEecCCCCCceEEEEEEecCCCCCCccccccccccccccCCCCEEEEEEEecC
Q 003876 694 LRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRVHTVAKGSKEISFGVDP 754 (790)
Q Consensus 694 ~~v~vsv~VtNtG~~~G~eVvQlY~~~p~~~~~~P~k~L~gF~kv~L~pGes~~V~~~l~~ 754 (790)
...+.+++++|+|+..-. +..+-.+. .-..| .+.|-.|+|||+.+|+++++.
T Consensus 134 ~~~~~~f~i~N~G~~pL~-I~~v~~sc---gct~~-----~~~~~~i~PGe~~~i~v~~~~ 185 (220)
T 2qsv_A 134 ETTKAAIEIRNVGAGPLR-LHSVTTRN---PALTA-----VPDRTEIKPGGSTLLRIAVDP 185 (220)
T ss_dssp SCEEEEEEEEECSSSCEE-EEEEEECS---TTEEE-----EESCSEECTTCEEEEEEEECH
T ss_pred CeEEEEEEEEECCCCCEE-EEEEEeCC---CCEee-----ecCCccCCCCCEEEEEEEEec
Confidence 457889999999887522 22222221 11112 245777999999999999987
No 36
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=41.14 E-value=28 Score=31.09 Aligned_cols=16 Identities=25% Similarity=0.422 Sum_probs=12.0
Q ss_pred cE--Eec-CceEEEEEecC
Q 003876 766 RR--ILP-LGNHVLMVGEL 781 (790)
Q Consensus 766 ~~--~~~-~G~y~i~vG~~ 781 (790)
.| +++ .|+|+|.|...
T Consensus 77 ~~~g~LP~sG~Y~i~V~~~ 95 (114)
T 4dzg_A 77 QWQGALPASGXYLIQVYQM 95 (114)
T ss_dssp CCEEECSSCC-CEEEEECC
T ss_pred eEEEEecCCCcEEEEEEec
Confidence 78 565 89999999864
No 37
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=39.11 E-value=55 Score=35.24 Aligned_cols=56 Identities=16% Similarity=-0.038 Sum_probs=34.8
Q ss_pred eEEEEEEEEecCCCCCceEEEEEEec-CCCCCCccccccccc-cccccCCCCEEEEEEEecCC
Q 003876 695 RFHVQISVTNAGDVDGSHVVMLFARV-PKVSQGTPEKQLIGF-DRVHTVAKGSKEISFGVDPC 755 (790)
Q Consensus 695 ~v~vsv~VtNtG~~~G~eVvQlY~~~-p~~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~~ 755 (790)
..+-+++|+|||.+.. +.-+.. +.... .+...|.=. .+-.|.|||+.+|++++...
T Consensus 47 ~~~~~l~i~N~g~~pa----~f~f~~~~~~~~-~~~~wl~v~p~~g~l~Pge~~~i~l~~~v~ 104 (366)
T 3qis_A 47 LQKEKFQISNNGQVPC----HFSFIPKLNDSQ-YCKPWLRAEPFEGYLEPNETVDISLDVYVS 104 (366)
T ss_dssp CEEEEEEEEECSSSCE----EEEEECCTTCSS-SSCTTEEEESCEEEECTTCEEEEEEEECBC
T ss_pred eEEEEEEEEecCCceE----EEEEEeCCCCCC-CCCCcEEEeCCccEECCCCEEEEEEEEEEC
Confidence 4678999999999874 332322 22221 111122111 23469999999999999874
No 38
>3ay2_A Lipid modified azurin protein; beta sandwich, bacterial protein, anticancer, anti-HIV/AIDS, antiparasitic activity, antitumor protein; 1.90A {Neisseria gonorrhoeae}
Probab=36.72 E-value=31 Score=33.01 Aligned_cols=24 Identities=4% Similarity=-0.031 Sum_probs=17.9
Q ss_pred ccCCCCEEEEEEEec---CCCCceEEeC
Q 003876 739 HTVAKGSKEISFGVD---PCEQLSIANK 763 (790)
Q Consensus 739 ~L~pGes~~V~~~l~---~~~~ls~~d~ 763 (790)
.|.|||+.+|+|+++ +. .+.||-.
T Consensus 125 ~l~pGet~svtf~~~~lkpG-~Y~f~Ct 151 (167)
T 3ay2_A 125 LIGGGEESSLTLDPAKLADG-DYKFACT 151 (167)
T ss_dssp CBCTTCEEEEEECGGGGTTS-CEEEECC
T ss_pred eeCCCCEEEEEEecCCCCCc-EEEEEcC
Confidence 489999999999875 43 3666654
No 39
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=34.66 E-value=11 Score=39.57 Aligned_cols=57 Identities=18% Similarity=0.337 Sum_probs=35.4
Q ss_pred HhhcCCEEEEEEecCCCCccccCCCCCCCCCHHH--HHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 495 IAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQ--MSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 495 ~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~~q--~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
..++||+||+..|... ..|.+|.+|---... .++++++++. +++.++++. .+|++..
T Consensus 66 ~~~~aDvVvitAG~pr---kpGmtR~dLl~~Na~I~~~i~~~i~~~-~p~aivlvv-sNPvd~~ 124 (294)
T 2x0j_A 66 LLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVV-TNPMDVM 124 (294)
T ss_dssp GGTTCSEEEECCCCCC---CSSSCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEEC-SSSHHHH
T ss_pred HhCCCCEEEEecCCCC---CCCCchHHHHHHHHHHHHHHHHHHHhc-CCceEEEEe-cCcchhh
Confidence 4689999999999653 345566654211111 3566677776 445555444 6999863
No 40
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=34.25 E-value=21 Score=37.95 Aligned_cols=58 Identities=24% Similarity=0.358 Sum_probs=30.8
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCCH--HHHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLPG--QQMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~--~q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
++.++||+||++.|... .+|.+|.+|---. --.++++++.+. +++.++++. ++|+++-
T Consensus 72 ~a~~~aDiVvi~ag~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~ilvv-tNPvdi~ 131 (326)
T 3vku_A 72 SDAKDADLVVITAGAPQ---KPGETRLDLVNKNLKILKSIVDPIVDS-GFNGIFLVA-ANPVDIL 131 (326)
T ss_dssp GGGTTCSEEEECCCCC-------------------CHHHHHHHHHTT-TCCSEEEEC-SSSHHHH
T ss_pred HHhcCCCEEEECCCCCC---CCCchHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEc-cCchHHH
Confidence 35789999999988642 3455676652111 124667777776 455665544 6999873
No 41
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=32.72 E-value=25 Score=37.45 Aligned_cols=56 Identities=13% Similarity=0.167 Sum_probs=36.2
Q ss_pred hhcCCEEEEEEecCCCCccccCCCCCCCCCHH--HHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 496 AKKADFVIVVAGLDLTQETEDRDRVSLLLPGQ--QMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 496 a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~~--q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
.++||+||++.|... .+|.+|.++-.-.. -.++++++.+. +++.++++. ++|+++.
T Consensus 87 ~~daDiVIitaG~p~---kpG~tR~dll~~N~~I~k~i~~~I~k~-~P~a~ilvv-tNPvdi~ 144 (330)
T 3ldh_A 87 SAGSKLVVITAGARQ---QEGESRLNLVQRNVNIFKFIIPNIVKH-SPDCLKELH-PELGTDK 144 (330)
T ss_dssp CSSCSEEEECCSCCC---CSSCCTTGGGHHHHHHHHHHHHHHHHH-CTTCEEEEC-SSSHHHH
T ss_pred hCCCCEEEEeCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHhh-CCCceEEeC-CCccHHH
Confidence 579999999998753 45667766532111 13566677777 556665554 6999873
No 42
>5mdh_A Malate dehydrogenase; oxidoreductase, (NAD(A)-CHOH(D)); HET: NAD; 2.40A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 4mdh_A*
Probab=31.75 E-value=24 Score=37.55 Aligned_cols=58 Identities=17% Similarity=0.242 Sum_probs=34.8
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCCH--HHHHHHHHHHHhCCCC-EEEEEeCCCccccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLPG--QQMSLVTSVARTSKRP-VILVLTGGGPLDVS 556 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~--~q~~LI~~va~~~~~~-vVVVl~~g~P~~l~ 556 (790)
+..+++|+||++.|... .+|.+|.+|---. -=.++++++.+. +++ +++++ .++|+++.
T Consensus 75 ~~~~daDvVvitAg~pr---kpG~tR~dll~~N~~i~~~i~~~i~~~-~~~~~~viv-vsNPvd~~ 135 (333)
T 5mdh_A 75 IAFKDLDVAILVGSMPR---RDGMERKDLLKANVKIFKCQGAALDKY-AKKSVKVIV-VGNPANTN 135 (333)
T ss_dssp HHTTTCSEEEECCSCCC---CTTCCTTTTHHHHHHHHHHHHHHHHHH-SCTTCEEEE-CSSSHHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEE-cCCchHHH
Confidence 45689999999887542 3455676542111 114566777777 444 33433 46999873
No 43
>3dnf_A ISPH, LYTB, 4-hydroxy-3-methylbut-2-ENYL diphosphate reductas; trilobal strucure, open alpha/beta, iron, iron-sulfur, isopr biosynthesis; 1.65A {Aquifex aeolicus}
Probab=31.27 E-value=2.5e+02 Score=29.33 Aligned_cols=138 Identities=12% Similarity=0.144 Sum_probs=74.1
Q ss_pred HHHHHHHHHHH--HhhhhhhccCCCcccCCCCCCCeEEEEccCcccccccCCCccCCCCCcCcHHHHHHhhhcceeEecc
Q 003876 400 SEHKKLALDAA--RQGIVLLKNDKKFLPLNKNAVSSLAIIGPLVNNISQMGGGYTGIPCSPKSLLRGLEAYVSKTHYASG 477 (790)
Q Consensus 400 ~~h~~lA~e~A--~esiVLLKN~~~~LPL~~~~~~kIaViGp~a~~~~~~~G~~~g~~~~~~t~~egL~~~~~~~~y~~g 477 (790)
||-.-+.-++. ...++|++|...+--|.. .+||+++-...-+.. ....+.+.|+++++++...
T Consensus 125 pEV~G~~g~~~~~~~~~~vV~~~ed~~~l~~--~~kv~~vsQTT~s~~-----------~~~~iv~~L~~r~p~~~~~-- 189 (297)
T 3dnf_A 125 PEVIGTLGYLRACNGKGIVVETLEDIGEALK--HERVGIVAQTTQNEE-----------FFKEVVGEIALWVKEVKVI-- 189 (297)
T ss_dssp HHHHHHHHHHHHTTCCEEEESSGGGGGGGGG--CSEEEEEECTTCCHH-----------HHHHHHHHHHHHSSEEEEE--
T ss_pred ceEEeeccccccCCCcEEEEcCHHHHHhcCC--CCcEEEEEecCCcHH-----------HHHHHHHHHHHhCCCCCCC--
Confidence 45555555542 345777777554433432 258888764322111 1234567888887754422
Q ss_pred CCCCCCCCchh-HHHHHHHhhcCCEEEEEEecCCCCccccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 478 CHDVPCNSDAG-FHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 478 ~~~~~~~~~~~-~~~a~~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~~q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
+..|+-+.. -+++.++|+++|++||+-|.++ .+-.+|.+ +++..++|+..| -+..=++..
T Consensus 190 --~tIC~AT~~RQ~av~~la~~~D~miVVGg~nS---------------SNT~rL~e-ia~~~~~~ty~I-e~~~el~~~ 250 (297)
T 3dnf_A 190 --NTICNATSLRQESVKKLAPEVDVMIIIGGKNS---------------GNTRRLYY-ISKELNPNTYHI-ETAEELQPE 250 (297)
T ss_dssp --CCCCSHHHHHHHHHHHHGGGSSEEEEESCTTC---------------HHHHHHHH-HHHHHCSSEEEE-SSGGGCCGG
T ss_pred --CCccHHHHHHHHHHHHHHhhCCEEEEECCCCC---------------chhHHHHH-HHHhcCCCEEEe-CChHHCCHH
Confidence 223443333 3455678899999999665432 34455555 444436777654 334445555
Q ss_pred ccccccCccEE-EEccCCC
Q 003876 557 FAEADSQISSI-LWIGYPG 574 (790)
Q Consensus 557 ~~~~~~~v~Ai-L~a~~pG 574 (790)
|+. ++..| |.++-..
T Consensus 251 wl~---~~~~VGITAGAST 266 (297)
T 3dnf_A 251 WFR---GVKRVGISAGAST 266 (297)
T ss_dssp GGT---TCSEEEEEECTTC
T ss_pred HhC---CCCEEEEeecCCC
Confidence 663 56555 4444333
No 44
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=31.25 E-value=13 Score=38.92 Aligned_cols=58 Identities=17% Similarity=0.315 Sum_probs=35.3
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCCH--HHHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLPG--QQMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~--~q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
++.++||+||++.|... .+|.+|.++..-. --.++++++.+. +++.++++. ++|+++.
T Consensus 65 ~a~~~aDiVViaag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivv-sNPvd~~ 124 (294)
T 1oju_A 65 SLLKGSEIIVVTAGLAR---KPGMTRLDLAHKNAGIIKDIAKKIVEN-APESKILVV-TNPMDVM 124 (294)
T ss_dssp GGGTTCSEEEECCCCCC---CSSCCHHHHHHHHHHHHHHHHHHHHTT-STTCEEEEC-SSSHHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEe-CCcchHH
Confidence 45689999999998653 3444565442111 113455666666 556666555 5999873
No 45
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=30.95 E-value=92 Score=31.45 Aligned_cols=52 Identities=12% Similarity=0.052 Sum_probs=33.8
Q ss_pred EEEEEEEecCCCCCceEEEEEEecCCCCCCcccccccccccc-ccCCCCEEEEEEEec
Q 003876 697 HVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRV-HTVAKGSKEISFGVD 753 (790)
Q Consensus 697 ~vsv~VtNtG~~~G~eVvQlY~~~p~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~ 753 (790)
.++++|+|+|+. --.+|..+.+.......| +.--==+ .|+||+.+.|.|...
T Consensus 39 ~~sl~l~N~~~~--P~LvQsWv~~~~~~~~~p---fivtPPlfRlep~~~q~lRIi~~ 91 (239)
T 4djm_A 39 GETLTVINDQDY--PMLVQSEVLSEDQKSPAP---FVVTPPLFRLDGQQSSRLRIVRT 91 (239)
T ss_dssp CEEEEEEECSSS--CEEEEEEEECTTSSSBCS---EEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--cEEEEEEEEcCCCCccCC---EEEcCCeEEECCCCceEEEEEEC
Confidence 478999999975 479999998643321111 0000112 489999999999653
No 46
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=30.03 E-value=15 Score=39.52 Aligned_cols=56 Identities=14% Similarity=0.175 Sum_probs=34.2
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCCHHH----HHHHHHHHHhCCCCEEEEEeCCCcccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQ----MSLVTSVARTSKRPVILVLTGGGPLDV 555 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~~q----~~LI~~va~~~~~~vVVVl~~g~P~~l 555 (790)
++.++||+||++.|... .+|.+|.+|- ..- .++.+++.+.+.+.++|++ .++|++.
T Consensus 96 ~a~~~advVvi~aG~pr---kpGmtR~DLl--~~Na~I~~~~~~~i~~~a~~~~~vlv-vsNPvd~ 155 (345)
T 4h7p_A 96 VAFDGVAIAIMCGAFPR---KAGMERKDLL--EMNARIFKEQGEAIAAVAASDCRVVV-VGNPANT 155 (345)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHHH--HHHHHHHHHHHHHHHHHSCTTCEEEE-CSSSHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHHH--HHhHHHHHHHHHHHHhhccCceEEEE-eCCCcch
Confidence 45789999999988653 4455666542 111 2445556665334555544 4799876
No 47
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=29.84 E-value=1.2e+02 Score=31.07 Aligned_cols=54 Identities=13% Similarity=0.148 Sum_probs=35.6
Q ss_pred EEEEEEEecCCCCCceEEEEEEecCCCCCCccccc---ccccccc-ccCCCCEEEEEEEec
Q 003876 697 HVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQ---LIGFDRV-HTVAKGSKEISFGVD 753 (790)
Q Consensus 697 ~vsv~VtNtG~~~G~eVvQlY~~~p~~~~~~P~k~---L~gF~kv-~L~pGes~~V~~~l~ 753 (790)
.++++|+|+|+. --.+|..+.+..... .|.+. +.--=-+ .|+||+++.|.|...
T Consensus 45 ~~sl~l~N~~~~--P~LvQsWid~~~~~~-~p~~~~~pfivtPPl~rl~pg~~q~lRI~~~ 102 (257)
T 3q48_A 45 EVTLRVSNTSGT--PVLAQAWIDDGRQDV-PPEELQVPFSVTPAVTRVEPNGGAVLRIAYL 102 (257)
T ss_dssp EEEEEEEECSSS--CEEEEEEEESSCCSS-CGGGGCCSEEEESSEEEECTTEEEEEEEEEC
T ss_pred EEEEEEEeCCCC--eEEEEEEEEcCCCcc-CcccccCCEEEcCCEEEECCCCceEEEEEEC
Confidence 589999999986 689999998644321 12211 1111223 499999999999643
No 48
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=29.22 E-value=44 Score=40.25 Aligned_cols=52 Identities=19% Similarity=0.245 Sum_probs=32.1
Q ss_pred eEEEEEEEEecCCCCCceEEEEEEecCCCCCCccc-----cccccc-------cccccCCCCEEEEEEE
Q 003876 695 RFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPE-----KQLIGF-------DRVHTVAKGSKEISFG 751 (790)
Q Consensus 695 ~v~vsv~VtNtG~~~G~eVvQlY~~~p~~~~~~P~-----k~L~gF-------~kv~L~pGes~~V~~~ 751 (790)
.=.++++|+|||+|. +|+=-+..--.+ .|. ..=.|| .-|..+|||+|+|++.
T Consensus 150 ~~~~~~~v~~~~~r~----~~v~sh~hf~e~-n~~l~fdr~~~~g~rl~~~~g~~~rf~pg~~~~v~l~ 213 (840)
T 4gy7_A 150 RKAVILKVTSKGDRP----IQVGSHYHFIEV-NPYLTFDRRKAYGMRLNIAAGTAVRFEPGDCKSVTLV 213 (840)
T ss_dssp CEEEEEEEEECCSSC----EEEETTSCGGGS-CTTEEBCHHHHTTEEECSCTTCEEEECTTCEEEEEEE
T ss_pred CceEEEEEEeCCCCc----eEeccccchhhc-CcccccchhhhccccccccCCCceeeCCCCeeEEEEE
Confidence 347899999999998 888433221111 111 111111 3466899999999984
No 49
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=29.02 E-value=16 Score=38.63 Aligned_cols=58 Identities=21% Similarity=0.321 Sum_probs=35.7
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCC--HHHHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLP--GQQMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp--~~q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
+..++||+||++.|... .+|.+|.+|--- .--.++++++.+. +++.++++. ++|+++.
T Consensus 74 ~a~~~aDvVIiaag~p~---kpg~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vlvv-sNPvd~~ 133 (315)
T 3tl2_A 74 ADTADSDVVVITAGIAR---KPGMSRDDLVATNSKIMKSITRDIAKH-SPNAIIVVL-TNPVDAM 133 (315)
T ss_dssp GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC-CSSHHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEC-CChHHHH
Confidence 35689999999998653 345566543211 1124566677776 455555444 6999873
No 50
>1exg_A EXO-1,4-beta-D-glycanase; cellulose binding domain, cellulose degradation; NMR {Cellulomonas fimi} SCOP: b.2.2.1 PDB: 1exh_A
Probab=28.67 E-value=80 Score=27.81 Aligned_cols=59 Identities=15% Similarity=0.249 Sum_probs=32.2
Q ss_pred cceEEEEEEEEecCCCC------------CceEEEEEEecCCCCCCccc-cccccccccccCCCCEEEEEEEec
Q 003876 693 SLRFHVQISVTNAGDVD------------GSHVVMLFARVPKVSQGTPE-KQLIGFDRVHTVAKGSKEISFGVD 753 (790)
Q Consensus 693 ~~~v~vsv~VtNtG~~~------------G~eVvQlY~~~p~~~~~~P~-k~L~gF~kv~L~pGes~~V~~~l~ 753 (790)
...++..|+|+|+|+.+ |..|.|+.-.....+. ..+ -.-.++.. .|+||++.++-|...
T Consensus 18 ~~Gf~~~vtVtN~g~~~i~gWtv~~~~~~g~~i~~~Wna~~s~sG-~~vt~~n~~wN~-~la~G~s~~fGf~~~ 89 (110)
T 1exg_A 18 NTGFTANVTVKNTSSAPVDGWTLTFSFPSGQQVTQAWSSTVTQSG-SAVTVRNAPWNG-SIPAGGTAQFGFNGS 89 (110)
T ss_dssp SSEEEEEEEEEECSSSCEESEEEEEECSSSCEEEEEESSEEEEET-TEEEEEECSGGG-EECSSEEEEEEEEEE
T ss_pred CCCEEEEEEEEeCCCCcccceEEEEEcCCCcEEecccceEEEccC-CEEEEecccccc-eeCCCcEEEEEEEEe
Confidence 35689999999999743 3445554321111010 111 11122322 489999988777764
No 51
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=28.41 E-value=16 Score=38.89 Aligned_cols=58 Identities=22% Similarity=0.306 Sum_probs=34.9
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCC--HHHHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLP--GQQMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp--~~q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
++.++||+||+++|... .+|.+|.+|--- .--.++++++.+. +++.++++ .++|+++-
T Consensus 69 ~a~~~aDvVvi~ag~p~---kpG~~R~dL~~~N~~Iv~~i~~~I~~~-~p~a~vlv-vtNPvd~~ 128 (326)
T 3pqe_A 69 EDCKDADIVCICAGANQ---KPGETRLELVEKNLKIFKGIVSEVMAS-GFDGIFLV-ATNPVDIL 128 (326)
T ss_dssp GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHT-TCCSEEEE-CSSSHHHH
T ss_pred HHhCCCCEEEEecccCC---CCCccHHHHHHHHHHHHHHHHHHHHHh-cCCeEEEE-cCChHHHH
Confidence 35689999999998643 334455443111 1124566677676 45555544 46999873
No 52
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=27.11 E-value=17 Score=38.52 Aligned_cols=58 Identities=21% Similarity=0.285 Sum_probs=31.9
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCCH--HHHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLPG--QQMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~--~q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
++.++||+||++.|.+. .+|.+|.+|---. --.++++++.+. +++.++++. ++|+++.
T Consensus 65 ~a~~~aDvVii~ag~~~---kpG~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivv-tNPvd~~ 124 (314)
T 3nep_X 65 GPTEDSDVCIITAGLPR---SPGMSRDDLLAKNTEIVGGVTEQFVEG-SPDSTIIVV-ANPLDVM 124 (314)
T ss_dssp GGGTTCSEEEECCCC----------CHHHHHHHHHHHHHHHHHHHTT-CTTCEEEEC-CSSHHHH
T ss_pred HHhCCCCEEEECCCCCC---CCCCCHHHHHHhhHHHHHHHHHHHHHh-CCCcEEEec-CCchhHH
Confidence 35689999999988642 3445565442111 123555666666 455665544 6999873
No 53
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=27.10 E-value=22 Score=37.94 Aligned_cols=57 Identities=19% Similarity=0.376 Sum_probs=35.9
Q ss_pred HhhcCCEEEEEEecCCCCccccCCCCCCCCCHH--HHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 495 IAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQ--QMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 495 ~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~~--q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
..++||+||++.|... .+|.+|.+|---.. -.++.+++.+. +++.++++. ++|+++-
T Consensus 84 ~~~~aDiVvi~aG~~~---kpG~tR~dL~~~N~~I~~~i~~~i~~~-~p~a~vlvv-tNPvdi~ 142 (331)
T 4aj2_A 84 VTANSKLVIITAGARQ---QEGESRLNLVQRNVNIFKFIIPNVVKY-SPQCKLLIV-SNPVDIL 142 (331)
T ss_dssp GGTTEEEEEECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTCEEEEC-SSSHHHH
T ss_pred HhCCCCEEEEccCCCC---CCCccHHHHHHHHHHHHHHHHHHHHHH-CCCeEEEEe-cChHHHH
Confidence 4689999999998653 35666765421111 13566667676 555665544 6999873
No 54
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=26.45 E-value=21 Score=37.71 Aligned_cols=58 Identities=26% Similarity=0.342 Sum_probs=34.8
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCC--HHHHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLP--GQQMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp--~~q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
+..++||+||++.|.+. .+|.+|.+|--- .--.++++++.+. +++.++++. ++|+++.
T Consensus 65 ~~~~~aDivii~ag~~r---kpG~~R~dll~~N~~I~~~i~~~i~~~-~p~a~vlvv-tNPvd~~ 124 (312)
T 3hhp_A 65 PALEGADVVLISAGVAR---KPGMDRSDLFNVNAGIVKNLVQQVAKT-CPKACIGII-TNPVNTT 124 (312)
T ss_dssp HHHTTCSEEEECCSCSC---CTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTSEEEEC-SSCHHHH
T ss_pred HHhCCCCEEEEeCCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHH-CCCcEEEEe-cCcchhH
Confidence 45689999999998643 345556543200 1113455666666 455555444 7999873
No 55
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=26.35 E-value=1.3e+02 Score=29.97 Aligned_cols=52 Identities=15% Similarity=0.091 Sum_probs=34.1
Q ss_pred EEEEEEEecCCCCCceEEEEEEecCCCCC--Ccccccccccccc-ccCCCCEEEEEEEec
Q 003876 697 HVQISVTNAGDVDGSHVVMLFARVPKVSQ--GTPEKQLIGFDRV-HTVAKGSKEISFGVD 753 (790)
Q Consensus 697 ~vsv~VtNtG~~~G~eVvQlY~~~p~~~~--~~P~k~L~gF~kv-~L~pGes~~V~~~l~ 753 (790)
.++++|+|+|+. --.||..+.+..... ..|- .--==+ .|+||+++.|.|...
T Consensus 29 ~~sl~l~N~~~~--p~LvQswv~~~~~~~~~~~pF---ivtPPl~Rl~p~~~q~lRI~~~ 83 (218)
T 4ay0_A 29 GVMVSVKNTQDY--PVLIQSRIYDENKEKESEDPF---VVTPPLFRLDAKQQNSLRIAQA 83 (218)
T ss_dssp CEEEEEECCSSS--CEEEEEEEECTTSCCCSSCSE---EEESSEEEECTTCEEEEEEEEC
T ss_pred EEEEEEEcCCCC--CEEEEEEEecCCCCccccCCE---EECCCeEEeCCCCceEEEEEec
Confidence 588999999976 479999997543321 1110 000112 489999999999765
No 56
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=25.34 E-value=14 Score=39.68 Aligned_cols=58 Identities=17% Similarity=0.150 Sum_probs=30.5
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCCH--HHHHHHHHHHHhCCCCEEEEEeCCCcccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLPG--QQMSLVTSVARTSKRPVILVLTGGGPLDV 555 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~--~q~~LI~~va~~~~~~vVVVl~~g~P~~l 555 (790)
++.++||+||++.|... .+|.+|.+|---. -=.++++++.+. +++.+.+++.++|+++
T Consensus 72 ~al~dADvVvitaG~p~---kpG~~R~dLl~~N~~I~~~i~~~i~~~-~p~a~~vlvvsNPvd~ 131 (343)
T 3fi9_A 72 EALTDAKYIVSSGGAPR---KEGMTREDLLKGNAEIAAQLGKDIKSY-CPDCKHVIIIFNPADI 131 (343)
T ss_dssp HHHTTEEEEEECCC----------CHHHHHHHHHHHHHHHHHHHHHH-CTTCCEEEECSSSHHH
T ss_pred HHhCCCCEEEEccCCCC---CCCCCHHHHHHHHHHHHHHHHHHHHHh-ccCcEEEEEecCchHH
Confidence 34679999999998643 3444565432110 113556667676 4455422334699987
No 57
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=25.28 E-value=24 Score=37.45 Aligned_cols=58 Identities=22% Similarity=0.229 Sum_probs=32.6
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCC--HHHHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLP--GQQMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp--~~q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
++.++||+||++.|... .+|.+|.++--- .--.++++++.+. +++.++++. ++|+++.
T Consensus 71 ~a~~~aDiVIiaag~p~---k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~iivv-tNPvd~~ 130 (324)
T 3gvi_A 71 AAIEGADVVIVTAGVPR---KPGMSRDDLLGINLKVMEQVGAGIKKY-APEAFVICI-TNPLDAM 130 (324)
T ss_dssp GGGTTCSEEEECCSCCC---C-----CHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC-CSSHHHH
T ss_pred HHHCCCCEEEEccCcCC---CCCCCHHHHHHhhHHHHHHHHHHHHHH-CCCeEEEec-CCCcHHH
Confidence 46789999999998653 234455543110 1123556666666 455665554 6999873
No 58
>7mdh_A Protein (malate dehydrogenase); chloroplastic malate dehydrogenase (NADP+), activated by LIG chloroplastic malate dehydrogenase; 2.40A {Sorghum bicolor} SCOP: c.2.1.5 d.162.1.1 PDB: 1civ_A*
Probab=25.12 E-value=25 Score=38.15 Aligned_cols=57 Identities=12% Similarity=0.296 Sum_probs=33.4
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCCHHH----HHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQ----MSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~~q----~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
+..++||+||++.|... .+|.+|.+|- ..- .++++++.+.++++.++++. ++|+++.
T Consensus 104 ~~~~daDvVVitag~pr---kpG~tR~DLl--~~N~~I~k~i~~~i~~~a~p~~ivlVv-sNPvD~~ 164 (375)
T 7mdh_A 104 EVFEDVDWALLIGAKPR---GPGMERAALL--DINGQIFADQGKALNAVASKNVKVLVV-GNPCNTN 164 (375)
T ss_dssp HHTTTCSEEEECCCCCC---CTTCCHHHHH--HHHHHHHHHHHHHHHHHSCTTCEEEEC-SSSHHHH
T ss_pred HHhCCCCEEEEcCCCCC---CCCCCHHHHH--HHHHHHHHHHHHHHHHhcCCCeEEEEe-cCchhHH
Confidence 56789999999877542 3455665432 111 23344455532445665544 6999874
No 59
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=24.37 E-value=1.6e+02 Score=29.29 Aligned_cols=52 Identities=13% Similarity=0.159 Sum_probs=34.7
Q ss_pred EEEEEEEecCCCCCceEEEEEEecCCCCCCcccccccccccc-ccCCCCEEEEEEEec
Q 003876 697 HVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGFDRV-HTVAKGSKEISFGVD 753 (790)
Q Consensus 697 ~vsv~VtNtG~~~G~eVvQlY~~~p~~~~~~P~k~L~gF~kv-~L~pGes~~V~~~l~ 753 (790)
.++++|+|+|+. --.+|..+.+.......| +.--=-+ .|+||+++.|.|...
T Consensus 29 ~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~p---fivtPPl~rl~p~~~q~lRI~~~ 81 (221)
T 2co7_B 29 GATLSVSNPQNY--PILVQSSVKAADKSSPAP---FLVMPPLFRLEANQQSQLRIVRT 81 (221)
T ss_dssp CEEEEEECCSSS--CEEEEEEEEETTSSSBCS---EEEESSEEEECTTCEEEEEEEEC
T ss_pred EEEEEEEcCCCC--cEEEEEEEecCCCCccCC---EEEeCCEEEECCCCceEEEEEEC
Confidence 478999999975 679999998643321111 1111112 489999999999654
No 60
>3hrz_B Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_G* 3hs0_B*
Probab=23.97 E-value=96 Score=31.44 Aligned_cols=59 Identities=17% Similarity=0.116 Sum_probs=36.4
Q ss_pred ceEEEEEEEEecCCCCCceEEEEEEecCCCCCCccccccccc-cccccCCCCEEEEEEEecCC
Q 003876 694 LRFHVQISVTNAGDVDGSHVVMLFARVPKVSQGTPEKQLIGF-DRVHTVAKGSKEISFGVDPC 755 (790)
Q Consensus 694 ~~v~vsv~VtNtG~~~G~eVvQlY~~~p~~~~~~P~k~L~gF-~kv~L~pGes~~V~~~l~~~ 755 (790)
+.+.+.++|-|..+..=+--|+|...........+. ..+ +++.|+||++++|.|.+.+.
T Consensus 96 E~~~l~~~V~Ny~~~~~~v~V~l~~~~~~~~~~~~~---~~~~~~v~v~a~~~~~v~f~i~p~ 155 (252)
T 3hrz_B 96 EQVEIRAILHNYVNEDIYVRVELLYNPAFCSASTKG---QRYRQQFPIKALSSRAVPFVIVPL 155 (252)
T ss_dssp CCEEEEEEEEECSSSCEEEEEEECCCTTEEESCCSS---CCEEEEEEECTTEEEEEEEEEEEC
T ss_pred CEEEEEEEEEcccCceEEEEEEEEcCCceEeecCCC---CceEEEEEECCCCeEEEEEEEEec
Confidence 579999999998776544334444322111111111 112 34679999999999999873
No 61
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=23.19 E-value=1.3e+02 Score=29.00 Aligned_cols=55 Identities=24% Similarity=0.290 Sum_probs=37.2
Q ss_pred hhHHHHHHHhhcCCEEEEEEecCCCCccccCCCCCCCCCHHHHHHHHHHHH-----hCCCCEEEEEeCCCc
Q 003876 487 AGFHEAVRIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVAR-----TSKRPVILVLTGGGP 552 (790)
Q Consensus 487 ~~~~~a~~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~~q~~LI~~va~-----~~~~~vVVVl~~g~P 552 (790)
+.+.+..+..+.||.+|++.= .+ +..+|+.-..+|+.+.. -.+||+.++..+|++
T Consensus 62 ~~~~~~~~~i~~AD~iVi~tP--~Y---------~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~tsgg~ 121 (199)
T 4hs4_A 62 APVLTMAQQIATADAVVIVTP--EY---------NYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTASPGM 121 (199)
T ss_dssp HHHHHHHHHHHHSSEEEEEEC--CB---------TTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEECSSS
T ss_pred HHHHHHHHHHHhCCEEEEEcC--cc---------CCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeCCCC
Confidence 456677788899999999762 11 34578888888988865 125666666555544
No 62
>2aan_A Auracyanin A; cupredoxin fold, electron transport; 1.85A {Chloroflexus aurantiacus}
Probab=22.85 E-value=1.1e+02 Score=27.64 Aligned_cols=17 Identities=12% Similarity=0.165 Sum_probs=14.0
Q ss_pred ccccCCCCEEEEEEEec
Q 003876 737 RVHTVAKGSKEISFGVD 753 (790)
Q Consensus 737 kv~L~pGes~~V~~~l~ 753 (790)
.+.|.|||+.+|+|+.+
T Consensus 98 t~~l~pGet~~v~f~~~ 114 (139)
T 2aan_A 98 SPLANGNETVEVTFTAP 114 (139)
T ss_dssp CCCBCTTCEEEEEEECC
T ss_pred ccccCCCCEEEEEEECC
Confidence 44589999999999874
No 63
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=20.69 E-value=51 Score=34.61 Aligned_cols=58 Identities=17% Similarity=0.264 Sum_probs=33.6
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCC--HHHHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLP--GQQMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp--~~q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
++.+++|+||+++|... .+|.+|.++..- .-=.++++++.+. +++.++++. .+|+++.
T Consensus 64 ~a~~~aDvVvi~ag~~~---~~g~~r~dl~~~n~~i~~~i~~~i~~~-~p~a~viv~-sNPv~~~ 123 (314)
T 1mld_A 64 DCLKGCDVVVIPAGVPR---KPGMTRDDLFNTNATIVATLTAACAQH-CPDAMICII-SNPVNST 123 (314)
T ss_dssp HHHTTCSEEEECCSCCC---CTTCCGGGGHHHHHHHHHHHHHHHHHH-CTTSEEEEC-SSCHHHH
T ss_pred HHhCCCCEEEECCCcCC---CCCCcHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEE-CCCcchh
Confidence 35689999999998653 334455543110 0113455566666 344444444 7999874
No 64
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=20.26 E-value=30 Score=36.62 Aligned_cols=58 Identities=21% Similarity=0.244 Sum_probs=34.6
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCC--HHHHHHHHHHHHhCCCCEEEEEeCCCccccc
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLP--GQQMSLVTSVARTSKRPVILVLTGGGPLDVS 556 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp--~~q~~LI~~va~~~~~~vVVVl~~g~P~~l~ 556 (790)
++.++||+||++.|... .+|.+|.++--- .--.++++++.+. +++.++++. ++|+++.
T Consensus 69 ~a~~~aDvVIi~ag~p~---k~G~~R~dl~~~N~~i~~~i~~~i~~~-~p~a~vivv-tNPvd~~ 128 (321)
T 3p7m_A 69 KDLENSDVVIVTAGVPR---KPGMSRDDLLGINIKVMQTVGEGIKHN-CPNAFVICI-TNPLDIM 128 (321)
T ss_dssp GGGTTCSEEEECCSCCC---CTTCCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEEC-CSSHHHH
T ss_pred HHHCCCCEEEEcCCcCC---CCCCCHHHHHHHhHHHHHHHHHHHHHH-CCCcEEEEe-cCchHHH
Confidence 46689999999988643 234455443100 1113556666676 455565555 7999873
No 65
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=20.04 E-value=90 Score=27.68 Aligned_cols=77 Identities=22% Similarity=0.170 Sum_probs=43.1
Q ss_pred HHhhcCCEEEEEEecCCCCccccCCCCCCCCCHHHHHHHHHHHHhCCCCEEEEEeCCCcccccccccccCccEEEEccCC
Q 003876 494 RIAKKADFVIVVAGLDLTQETEDRDRVSLLLPGQQMSLVTSVARTSKRPVILVLTGGGPLDVSFAEADSQISSILWIGYP 573 (790)
Q Consensus 494 ~~a~~aDvvIv~vG~~~~~e~Eg~Dr~~l~Lp~~q~~LI~~va~~~~~~vVVVl~~g~P~~l~~~~~~~~v~AiL~a~~p 573 (790)
...+.+|++||.+|...... ++.+.| |+...+. ++|+|.|---| .-.+|... .+...-+..|.
T Consensus 34 ~~I~~~~~vIvL~G~~t~~s-----------~wv~~E-I~~A~~~-gkpIigV~~~g-~~~~P~~l--~~~a~~iV~Wn- 96 (111)
T 1eiw_A 34 ATPEDADAVIVLAGLWGTRR-----------DEILGA-VDLARKS-SKPIITVRPYG-LENVPPEL--EAVSSEVVGWN- 96 (111)
T ss_dssp CCSSSCSEEEEEGGGTTTSH-----------HHHHHH-HHHHTTT-TCCEEEECCSS-SSCCCTTH--HHHCSEEECSC-
T ss_pred CccccCCEEEEEeCCCcCCC-----------hHHHHH-HHHHHHc-CCCEEEEEcCC-CCcCCHHH--HhhCceeccCC-
Confidence 45689999999999653211 233334 4443344 89988764433 23333211 12222345674
Q ss_pred ChhHHHHHHHHHhCCCCC
Q 003876 574 GEAGAKALAEIIFGDFNP 591 (790)
Q Consensus 574 Gqe~g~AiAdVL~G~~nP 591 (790)
.+.|.|.|-|..+|
T Consensus 97 ----~~~I~~aI~~~~~~ 110 (111)
T 1eiw_A 97 ----PHCIRDALEDALDV 110 (111)
T ss_dssp ----HHHHHHHHHHHHCC
T ss_pred ----HHHHHHHHHhccCC
Confidence 47788887776665
Done!