Query 003878
Match_columns 789
No_of_seqs 430 out of 4131
Neff 8.7
Searched_HMMs 29240
Date Mon Mar 25 06:58:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/003878.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/003878hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3iuj_A Prolyl endopeptidase; h 100.0 1.6E-98 5E-103 896.7 83.4 677 6-786 5-687 (693)
2 2xdw_A Prolyl endopeptidase; a 100.0 9.5E-95 3.2E-99 867.5 88.3 700 11-789 4-710 (710)
3 2bkl_A Prolyl endopeptidase; m 100.0 2.8E-93 9.4E-98 852.6 81.7 674 12-787 2-679 (695)
4 1yr2_A Prolyl oligopeptidase; 100.0 2.7E-91 9.3E-96 841.2 82.1 678 10-788 37-722 (741)
5 2xe4_A Oligopeptidase B; hydro 100.0 8.3E-91 2.8E-95 835.4 79.1 676 1-788 21-746 (751)
6 4hvt_A Ritya.17583.B, post-pro 100.0 1.4E-89 4.7E-94 807.4 71.4 665 24-787 13-710 (711)
7 3azo_A Aminopeptidase; POP fam 100.0 1.2E-50 4.1E-55 481.0 58.3 593 81-787 24-652 (662)
8 4a5s_A Dipeptidyl peptidase 4 100.0 1.9E-48 6.4E-53 468.4 64.1 610 107-786 38-728 (740)
9 2ecf_A Dipeptidyl peptidase IV 100.0 2.6E-46 8.8E-51 449.5 62.5 607 87-784 45-740 (741)
10 2z3z_A Dipeptidyl aminopeptida 100.0 2.3E-45 8E-50 438.8 64.6 606 82-783 27-706 (706)
11 1z68_A Fibroblast activation p 100.0 3.8E-46 1.3E-50 446.8 56.8 604 106-784 37-719 (719)
12 3o4h_A Acylamino-acid-releasin 100.0 2.9E-46 1E-50 436.7 51.5 553 67-785 9-581 (582)
13 1xfd_A DIP, dipeptidyl aminope 100.0 7.1E-45 2.4E-49 435.6 43.7 601 106-785 38-723 (723)
14 2jbw_A Dhpon-hydrolase, 2,6-di 99.9 1.8E-23 6.1E-28 231.1 22.1 278 465-786 85-367 (386)
15 1vlq_A Acetyl xylan esterase; 99.9 1.9E-22 6.4E-27 218.2 21.6 246 504-785 64-336 (337)
16 3ga7_A Acetyl esterase; phosph 99.9 9.1E-22 3.1E-26 212.1 26.2 244 505-785 60-324 (326)
17 2o7r_A CXE carboxylesterase; a 99.9 8.9E-24 3E-28 229.0 10.4 286 459-786 4-334 (338)
18 3hxk_A Sugar hydrolase; alpha- 99.9 3.9E-22 1.3E-26 209.0 21.3 237 511-785 17-268 (276)
19 3bxp_A Putative lipase/esteras 99.9 1.1E-21 3.9E-26 205.5 23.9 235 507-783 3-271 (277)
20 3doh_A Esterase; alpha-beta hy 99.9 3E-21 1E-25 212.8 22.3 221 507-782 143-378 (380)
21 4ao6_A Esterase; hydrolase, th 99.9 2.2E-21 7.7E-26 202.0 20.0 215 508-784 30-259 (259)
22 1l7a_A Cephalosporin C deacety 99.9 2.4E-21 8.2E-26 206.4 20.6 243 504-784 52-317 (318)
23 3f67_A Putative dienelactone h 99.9 3.4E-21 1.1E-25 196.9 19.8 225 505-781 3-240 (241)
24 3ebl_A Gibberellin receptor GI 99.9 2.1E-20 7.1E-25 204.8 27.0 246 504-786 60-354 (365)
25 3qh4_A Esterase LIPW; structur 99.9 5.5E-21 1.9E-25 205.3 21.0 236 505-784 57-316 (317)
26 3bjr_A Putative carboxylestera 99.9 3.3E-21 1.1E-25 202.9 16.9 233 508-782 19-282 (283)
27 3fak_A Esterase/lipase, ESTE5; 99.9 8E-21 2.8E-25 204.4 19.7 229 521-786 66-311 (322)
28 1mpx_A Alpha-amino acid ester 99.9 9.3E-21 3.2E-25 221.4 20.9 253 504-786 21-357 (615)
29 2zsh_A Probable gibberellin re 99.9 4E-20 1.4E-24 201.4 24.4 237 505-781 69-350 (351)
30 3ls2_A S-formylglutathione hyd 99.8 4.2E-21 1.5E-25 201.6 14.4 247 508-784 15-279 (280)
31 3fcy_A Xylan esterase 1; alpha 99.8 9.3E-21 3.2E-25 205.7 17.3 239 504-781 78-343 (346)
32 2b9v_A Alpha-amino acid ester 99.8 1.6E-20 5.5E-25 220.2 19.6 251 505-786 34-369 (652)
33 3i6y_A Esterase APC40077; lipa 99.8 5.1E-21 1.7E-25 201.0 13.8 247 507-784 16-279 (280)
34 3e4d_A Esterase D; S-formylglu 99.8 7.6E-21 2.6E-25 199.3 13.8 247 507-784 14-278 (278)
35 3ain_A 303AA long hypothetical 99.8 3.6E-19 1.2E-23 191.6 27.1 238 504-785 61-322 (323)
36 2hm7_A Carboxylesterase; alpha 99.8 1.2E-19 4.1E-24 193.8 23.2 241 504-784 44-310 (310)
37 1lzl_A Heroin esterase; alpha/ 99.8 1.8E-19 6E-24 193.9 24.2 242 504-786 47-319 (323)
38 3fcx_A FGH, esterase D, S-form 99.8 6.7E-21 2.3E-25 199.9 11.4 246 509-784 17-281 (282)
39 2wir_A Pesta, alpha/beta hydro 99.8 5.4E-20 1.9E-24 196.8 18.3 236 506-784 49-312 (313)
40 2c7b_A Carboxylesterase, ESTE1 99.8 2.4E-19 8.2E-24 191.5 23.2 240 505-785 45-310 (311)
41 3k6k_A Esterase/lipase; alpha/ 99.8 1.9E-19 6.4E-24 193.7 21.5 235 503-786 55-311 (322)
42 3k2i_A Acyl-coenzyme A thioest 99.8 4.9E-19 1.7E-23 197.9 24.7 223 521-786 144-414 (422)
43 1zi8_A Carboxymethylenebutenol 99.8 6E-20 2E-24 186.9 15.3 214 510-786 5-235 (236)
44 2hdw_A Hypothetical protein PA 99.8 1.3E-19 4.5E-24 197.7 19.0 244 505-783 65-367 (367)
45 2i3d_A AGR_C_3351P, hypothetic 99.8 1.5E-18 5.2E-23 178.9 25.7 209 510-786 25-236 (249)
46 2o2g_A Dienelactone hydrolase; 99.8 2.8E-19 9.7E-24 179.8 19.4 215 505-784 9-223 (223)
47 3hlk_A Acyl-coenzyme A thioest 99.8 7.1E-19 2.4E-23 197.9 24.5 223 521-786 160-430 (446)
48 4b6g_A Putative esterase; hydr 99.8 2.5E-20 8.5E-25 196.2 11.2 246 508-784 22-283 (283)
49 1jkm_A Brefeldin A esterase; s 99.8 7.1E-19 2.4E-23 192.4 22.8 246 505-783 79-358 (361)
50 3ksr_A Putative serine hydrola 99.8 4.9E-19 1.7E-23 186.4 18.7 234 507-785 5-243 (290)
51 2uz0_A Esterase, tributyrin es 99.8 1.3E-19 4.4E-24 188.0 13.4 244 506-786 5-259 (263)
52 2wtm_A EST1E; hydrolase; 1.60A 99.8 8.1E-19 2.8E-23 181.1 17.8 235 511-784 4-250 (251)
53 4e15_A Kynurenine formamidase; 99.8 2.4E-19 8.2E-24 190.9 14.3 213 508-760 58-280 (303)
54 1jjf_A Xylanase Z, endo-1,4-be 99.8 6E-18 2E-22 176.6 24.2 217 507-782 31-260 (268)
55 1jji_A Carboxylesterase; alpha 99.8 8.4E-19 2.9E-23 187.6 17.1 229 507-781 55-310 (311)
56 3pfb_A Cinnamoyl esterase; alp 99.8 4.7E-18 1.6E-22 176.4 19.8 237 507-782 21-267 (270)
57 2gop_A Trilobed protease; beta 99.8 2.9E-16 9.9E-21 169.5 34.5 308 75-495 9-338 (347)
58 1sfr_A Antigen 85-A; alpha/bet 99.8 6.4E-18 2.2E-22 180.2 21.0 249 507-787 8-287 (304)
59 3h04_A Uncharacterized protein 99.8 1.5E-17 5E-22 172.1 23.0 231 509-784 4-274 (275)
60 3trd_A Alpha/beta hydrolase; c 99.8 9E-18 3.1E-22 167.7 20.4 200 508-779 6-207 (208)
61 3fnb_A Acylaminoacyl peptidase 99.8 5.4E-18 1.8E-22 188.4 20.1 240 507-785 134-403 (405)
62 1jfr_A Lipase; serine hydrolas 99.8 1.5E-17 5.2E-22 172.7 21.6 207 504-786 21-234 (262)
63 4h0c_A Phospholipase/carboxyle 99.8 1.1E-18 3.9E-23 175.4 12.6 186 536-780 20-209 (210)
64 2fuk_A XC6422 protein; A/B hyd 99.8 1.5E-17 5E-22 167.4 20.6 208 507-785 9-218 (220)
65 3vis_A Esterase; alpha/beta-hy 99.8 1.2E-17 4.2E-22 178.1 19.8 203 506-786 67-278 (306)
66 2pbl_A Putative esterase/lipas 99.8 1.3E-17 4.5E-22 173.0 19.0 201 510-764 40-247 (262)
67 3hju_A Monoglyceride lipase; a 99.8 3.8E-17 1.3E-21 176.1 23.0 242 505-784 31-313 (342)
68 3d7r_A Esterase; alpha/beta fo 99.8 1.1E-17 3.6E-22 180.3 18.4 222 522-784 84-323 (326)
69 1lns_A X-prolyl dipeptidyl ami 99.8 9.5E-18 3.2E-22 199.6 19.5 253 501-786 161-524 (763)
70 3mve_A FRSA, UPF0255 protein V 99.7 2.4E-17 8.1E-22 183.5 19.6 235 506-784 166-414 (415)
71 1vkh_A Putative serine hydrola 99.7 1.6E-18 5.5E-23 181.3 9.4 206 535-779 38-272 (273)
72 1r88_A MPT51/MPB51 antigen; AL 99.7 2E-17 6.8E-22 174.2 17.3 241 506-785 9-275 (280)
73 3og9_A Protein YAHD A copper i 99.7 2.6E-17 8.8E-22 164.9 17.2 185 535-782 14-208 (209)
74 2hqs_A Protein TOLB; TOLB, PAL 99.7 4.2E-15 1.4E-19 165.6 36.3 264 90-462 143-409 (415)
75 4fhz_A Phospholipase/carboxyle 99.7 1.4E-17 4.9E-22 175.1 14.9 204 520-784 50-267 (285)
76 3llc_A Putative hydrolase; str 99.7 1.2E-16 4.1E-21 165.1 21.6 235 508-781 11-268 (270)
77 3d0k_A Putative poly(3-hydroxy 99.7 1.8E-16 6.1E-21 168.7 23.3 226 509-781 25-286 (304)
78 2qm0_A BES; alpha-beta structu 99.7 1.2E-17 3.9E-22 175.5 13.7 232 507-780 17-273 (275)
79 3iii_A COCE/NOND family hydrol 99.7 5.3E-17 1.8E-21 186.0 20.3 241 507-786 40-323 (560)
80 4ezi_A Uncharacterized protein 99.7 9.2E-17 3.2E-21 175.5 21.1 253 504-786 39-373 (377)
81 1ufo_A Hypothetical protein TT 99.7 5.5E-17 1.9E-21 164.4 17.3 220 514-784 8-236 (238)
82 3pe6_A Monoglyceride lipase; a 99.7 4.7E-16 1.6E-20 162.9 24.8 237 512-785 21-296 (303)
83 4fbl_A LIPS lipolytic enzyme; 99.7 5.5E-17 1.9E-21 170.8 16.5 213 536-782 49-281 (281)
84 1fj2_A Protein (acyl protein t 99.7 1.5E-16 5.3E-21 161.1 18.8 201 526-785 14-230 (232)
85 1dqz_A 85C, protein (antigen 8 99.7 9.9E-17 3.4E-21 168.7 17.0 244 507-784 5-279 (280)
86 3u0v_A Lysophospholipase-like 99.7 1.8E-16 6.2E-21 161.7 17.1 195 536-785 21-233 (239)
87 1auo_A Carboxylesterase; hydro 99.7 6.5E-16 2.2E-20 154.8 20.2 197 526-784 5-218 (218)
88 3bdi_A Uncharacterized protein 99.7 8E-16 2.7E-20 152.6 20.0 199 509-780 5-205 (207)
89 2r8b_A AGR_C_4453P, uncharacte 99.7 3E-16 1E-20 161.6 17.1 184 536-785 60-250 (251)
90 3b5e_A MLL8374 protein; NP_108 99.7 2.5E-16 8.7E-21 159.0 15.6 197 520-783 16-217 (223)
91 2qru_A Uncharacterized protein 99.7 3.4E-16 1.2E-20 164.0 16.9 230 513-781 9-273 (274)
92 3dkr_A Esterase D; alpha beta 99.7 3.9E-16 1.3E-20 159.2 16.3 216 535-782 19-248 (251)
93 3pe7_A Oligogalacturonate lyas 99.7 1.3E-14 4.6E-19 158.9 28.5 262 137-495 41-337 (388)
94 3cn9_A Carboxylesterase; alpha 99.7 1E-15 3.4E-20 155.0 17.9 190 534-783 20-226 (226)
95 1k32_A Tricorn protease; prote 99.7 2.9E-14 9.9E-19 177.5 34.9 340 82-487 16-463 (1045)
96 4f0j_A Probable hydrolytic enz 99.7 2.3E-15 7.9E-20 159.0 21.4 238 506-781 18-313 (315)
97 1gkl_A Endo-1,4-beta-xylanase 99.7 2.3E-15 7.8E-20 159.8 21.1 205 507-761 40-272 (297)
98 2h1i_A Carboxylesterase; struc 99.7 2.1E-15 7.3E-20 152.3 19.9 184 536-783 36-226 (226)
99 3g8y_A SUSD/RAGB-associated es 99.7 1.5E-16 5.1E-21 175.8 12.3 149 504-656 83-262 (391)
100 2hqs_A Protein TOLB; TOLB, PAL 99.7 7.3E-14 2.5E-18 155.5 34.0 206 237-486 181-388 (415)
101 3rm3_A MGLP, thermostable mono 99.7 3.2E-16 1.1E-20 162.6 13.8 213 537-784 39-270 (270)
102 4fle_A Esterase; structural ge 99.7 4.1E-16 1.4E-20 155.1 13.2 188 539-785 3-195 (202)
103 1k8q_A Triacylglycerol lipase, 99.7 2E-15 6.8E-20 164.4 19.0 148 505-655 24-185 (377)
104 3nuz_A Putative acetyl xylan e 99.7 8.5E-17 2.9E-21 178.1 8.2 148 504-655 88-266 (398)
105 3i2k_A Cocaine esterase; alpha 99.7 6.5E-16 2.2E-20 179.2 15.7 139 508-657 9-149 (587)
106 4f21_A Carboxylesterase/phosph 99.6 1.4E-15 4.8E-20 156.5 16.2 215 506-785 13-246 (246)
107 2ecf_A Dipeptidyl peptidase IV 99.6 4.2E-14 1.4E-18 169.1 30.2 297 133-486 38-416 (741)
108 1tht_A Thioesterase; 2.10A {Vi 99.6 9.2E-15 3.2E-19 155.7 20.8 237 509-782 8-264 (305)
109 3c5m_A Oligogalacturonate lyas 99.6 1.9E-14 6.4E-19 157.8 23.5 260 134-495 38-337 (396)
110 3h2g_A Esterase; xanthomonas o 99.6 9.9E-15 3.4E-19 161.5 21.2 150 506-656 44-212 (397)
111 2gzs_A IROE protein; enterobac 99.6 1.1E-14 3.8E-19 152.9 20.1 223 507-781 12-264 (278)
112 2fx5_A Lipase; alpha-beta hydr 99.6 5.3E-15 1.8E-19 153.3 17.0 185 524-784 34-229 (258)
113 3d59_A Platelet-activating fac 99.6 5.2E-15 1.8E-19 163.0 17.4 207 520-786 82-353 (383)
114 2qjw_A Uncharacterized protein 99.6 1.1E-14 3.9E-19 140.8 17.6 173 536-780 2-174 (176)
115 3pe7_A Oligogalacturonate lyas 99.6 5.3E-14 1.8E-18 154.1 24.9 313 84-486 41-385 (388)
116 3c8d_A Enterochelin esterase; 99.6 5.2E-15 1.8E-19 163.7 16.4 224 507-784 167-399 (403)
117 2ojh_A Uncharacterized protein 99.6 6E-13 2.1E-17 138.5 30.0 258 105-471 22-292 (297)
118 2y6u_A Peroxisomal membrane pr 99.6 8.3E-15 2.8E-19 161.4 15.2 239 513-784 25-346 (398)
119 4a5s_A Dipeptidyl peptidase 4 99.6 1.8E-13 6.1E-18 164.0 27.9 293 135-486 20-401 (740)
120 2pl5_A Homoserine O-acetyltran 99.6 3.8E-14 1.3E-18 153.9 19.8 236 517-781 29-364 (366)
121 2qs9_A Retinoblastoma-binding 99.6 5.8E-14 2E-18 138.5 18.3 181 537-783 3-186 (194)
122 3r0v_A Alpha/beta hydrolase fo 99.6 5E-14 1.7E-18 144.7 17.9 212 512-780 6-261 (262)
123 3guu_A Lipase A; protein struc 99.6 9.4E-14 3.2E-18 154.0 21.1 249 505-785 72-408 (462)
124 3c5m_A Oligogalacturonate lyas 99.6 5.2E-14 1.8E-18 154.2 19.0 313 85-487 42-386 (396)
125 3ia2_A Arylesterase; alpha-bet 99.6 6.3E-14 2.2E-18 145.5 18.6 221 513-780 3-270 (271)
126 3u1t_A DMMA haloalkane dehalog 99.6 3.1E-14 1.1E-18 149.8 16.2 222 517-786 17-300 (309)
127 1l0q_A Surface layer protein; 99.6 9E-12 3.1E-16 136.4 36.5 320 134-531 34-386 (391)
128 3vdx_A Designed 16NM tetrahedr 99.6 2.7E-13 9.3E-18 152.7 24.8 229 509-784 4-281 (456)
129 1qlw_A Esterase; anisotropic r 99.6 6.6E-14 2.3E-18 150.7 18.8 206 520-785 48-323 (328)
130 3i1i_A Homoserine O-acetyltran 99.6 3.3E-14 1.1E-18 154.7 16.6 249 511-784 15-374 (377)
131 3kxp_A Alpha-(N-acetylaminomet 99.6 3.2E-14 1.1E-18 151.2 16.0 215 516-780 55-313 (314)
132 3oos_A Alpha/beta hydrolase fa 99.6 3.7E-14 1.3E-18 146.6 16.1 117 517-654 11-127 (278)
133 1uxo_A YDEN protein; hydrolase 99.6 1.2E-13 4.2E-18 135.7 18.8 183 537-784 3-188 (192)
134 1imj_A CIB, CCG1-interacting f 99.6 7.5E-15 2.6E-19 146.2 10.0 191 517-781 15-208 (210)
135 3dqz_A Alpha-hydroxynitrIle ly 99.5 1.2E-13 4.2E-18 141.6 18.4 214 539-783 5-258 (258)
136 3sty_A Methylketone synthase 1 99.5 5.9E-14 2E-18 144.8 15.3 215 536-781 10-265 (267)
137 1xfd_A DIP, dipeptidyl aminope 99.5 3.2E-13 1.1E-17 160.9 23.2 289 134-485 19-395 (723)
138 1brt_A Bromoperoxidase A2; hal 99.5 2.5E-13 8.7E-18 141.8 19.5 218 515-780 9-276 (277)
139 3v48_A Aminohydrolase, putativ 99.5 6.4E-14 2.2E-18 145.9 14.8 209 536-783 13-261 (268)
140 3e0x_A Lipase-esterase related 99.5 6E-14 2.1E-18 142.2 14.0 184 536-762 14-230 (245)
141 1qe3_A PNB esterase, para-nitr 99.5 3.3E-15 1.1E-19 169.2 5.0 217 522-763 83-316 (489)
142 3i28_A Epoxide hydrolase 2; ar 99.5 6.7E-14 2.3E-18 160.7 15.1 126 508-653 237-362 (555)
143 3fsg_A Alpha/beta superfamily 99.5 2.4E-14 8.4E-19 147.6 10.3 220 517-784 9-270 (272)
144 1a8q_A Bromoperoxidase A1; hal 99.5 2E-12 7E-17 134.3 24.9 223 513-780 3-273 (274)
145 4dnp_A DAD2; alpha/beta hydrol 99.5 1E-13 3.5E-18 142.6 14.8 210 537-781 19-268 (269)
146 3qvm_A OLEI00960; structural g 99.5 2.3E-14 7.7E-19 148.5 9.7 209 539-783 29-279 (282)
147 1a8s_A Chloroperoxidase F; hal 99.5 5.6E-13 1.9E-17 138.5 20.3 118 513-652 3-121 (273)
148 3qit_A CURM TE, polyketide syn 99.5 2.5E-13 8.5E-18 140.6 17.4 122 516-655 11-132 (286)
149 3hss_A Putative bromoperoxidas 99.5 1.8E-13 6.1E-18 143.3 16.5 207 536-781 41-290 (293)
150 2ocg_A Valacyclovir hydrolase; 99.5 5.3E-13 1.8E-17 137.3 19.6 219 517-779 10-253 (254)
151 1mtz_A Proline iminopeptidase; 99.5 2E-13 6.7E-18 143.5 16.4 122 516-654 12-133 (293)
152 1z68_A Fibroblast activation p 99.5 2.9E-13 9.9E-18 161.4 19.5 289 136-486 20-394 (719)
153 3om8_A Probable hydrolase; str 99.5 4.7E-13 1.6E-17 139.3 18.2 221 512-780 8-265 (266)
154 4g9e_A AHL-lactonase, alpha/be 99.5 2.8E-14 9.6E-19 147.7 8.9 214 536-785 22-272 (279)
155 2yys_A Proline iminopeptidase- 99.5 5.1E-13 1.8E-17 140.5 18.5 225 511-781 5-275 (286)
156 2b61_A Homoserine O-acetyltran 99.5 2.1E-13 7.1E-18 148.8 16.0 115 538-654 59-190 (377)
157 3fob_A Bromoperoxidase; struct 99.5 1.1E-12 3.6E-17 137.4 20.5 117 514-652 12-129 (281)
158 1a88_A Chloroperoxidase L; hal 99.5 1.5E-12 5E-17 135.4 21.3 120 513-652 3-123 (275)
159 2xua_A PCAD, 3-oxoadipate ENOL 99.5 4.6E-13 1.6E-17 139.1 16.8 219 516-780 9-263 (266)
160 1tqh_A Carboxylesterase precur 99.5 2.5E-13 8.7E-18 139.5 14.2 209 538-782 16-245 (247)
161 1wm1_A Proline iminopeptidase; 99.5 1.1E-12 3.9E-17 139.4 19.7 124 510-652 16-139 (317)
162 3bdv_A Uncharacterized protein 99.5 7.4E-13 2.5E-17 130.1 16.9 174 536-784 15-189 (191)
163 3o4h_A Acylamino-acid-releasin 99.5 1.1E-12 3.8E-17 152.3 21.1 243 134-483 24-274 (582)
164 1j1i_A META cleavage compound 99.5 2.7E-13 9.3E-18 143.3 14.4 226 516-787 23-287 (296)
165 1ycd_A Hypothetical 27.3 kDa p 99.5 2.1E-13 7.1E-18 139.6 12.9 206 537-785 4-240 (243)
166 3g9x_A Haloalkane dehalogenase 99.5 1.4E-13 4.8E-18 144.2 11.9 116 517-653 18-133 (299)
167 1q0r_A RDMC, aclacinomycin met 99.5 3.3E-12 1.1E-16 134.8 22.3 122 516-653 8-129 (298)
168 1zoi_A Esterase; alpha/beta hy 99.5 1.5E-12 5.2E-17 135.6 19.4 120 513-652 4-124 (276)
169 2r11_A Carboxylesterase NP; 26 99.5 1.1E-12 3.7E-17 139.1 18.4 236 509-780 46-305 (306)
170 1iup_A META-cleavage product h 99.5 4.1E-13 1.4E-17 140.9 14.8 220 516-781 12-272 (282)
171 4g56_B MGC81050 protein; prote 99.5 3E-12 1E-16 139.3 22.1 260 130-487 41-303 (357)
172 2puj_A 2-hydroxy-6-OXO-6-pheny 99.5 5.4E-13 1.8E-17 140.3 15.1 208 538-781 33-285 (286)
173 1c4x_A BPHD, protein (2-hydrox 99.4 4.9E-13 1.7E-17 140.2 14.0 222 515-780 13-283 (285)
174 2vat_A Acetyl-COA--deacetylcep 99.4 2.2E-13 7.4E-18 153.0 11.9 116 537-654 108-236 (444)
175 1azw_A Proline iminopeptidase; 99.4 4.9E-12 1.7E-16 134.1 20.9 124 510-652 13-136 (313)
176 1hkh_A Gamma lactamase; hydrol 99.4 1.7E-12 5.6E-17 135.5 16.5 117 515-653 9-126 (279)
177 4fol_A FGH, S-formylglutathion 99.4 4.6E-13 1.6E-17 141.3 12.2 251 507-785 13-298 (299)
178 1u2e_A 2-hydroxy-6-ketonona-2, 99.4 2E-12 6.8E-17 135.8 17.1 206 539-780 37-287 (289)
179 3p2m_A Possible hydrolase; alp 99.4 4.8E-13 1.7E-17 143.5 12.5 202 538-780 81-328 (330)
180 2qvb_A Haloalkane dehalogenase 99.4 1.1E-12 3.7E-17 137.2 14.6 120 516-654 15-135 (297)
181 3gff_A IROE-like serine hydrol 99.4 1.1E-12 3.8E-17 140.7 14.9 225 507-783 11-266 (331)
182 3nwo_A PIP, proline iminopepti 99.4 1.9E-12 6.4E-17 139.2 16.8 126 517-653 36-161 (330)
183 1k32_A Tricorn protease; prote 99.4 2.9E-11 9.8E-16 150.5 29.8 324 83-487 206-602 (1045)
184 2ojh_A Uncharacterized protein 99.4 5.1E-11 1.8E-15 123.7 27.0 208 237-487 44-260 (297)
185 2gop_A Trilobed protease; beta 99.4 5.9E-11 2E-15 127.6 28.3 235 133-482 16-290 (347)
186 3r40_A Fluoroacetate dehalogen 99.4 1.4E-12 4.9E-17 136.7 15.2 120 515-652 19-138 (306)
187 2xdw_A Prolyl endopeptidase; a 99.4 3.5E-11 1.2E-15 143.3 29.1 264 139-487 79-370 (710)
188 3azo_A Aminopeptidase; POP fam 99.4 3.1E-11 1.1E-15 142.2 28.4 258 88-446 88-375 (662)
189 3ow8_A WD repeat-containing pr 99.4 3.9E-11 1.3E-15 128.4 26.3 240 130-483 79-319 (321)
190 1mj5_A 1,3,4,6-tetrachloro-1,4 99.4 1.5E-12 5.3E-17 136.7 14.9 121 515-654 15-136 (302)
191 3vgz_A Uncharacterized protein 99.4 1.7E-10 6E-15 123.8 31.3 249 134-487 43-305 (353)
192 4gqb_B Methylosome protein 50; 99.4 9.4E-11 3.2E-15 126.8 29.1 205 237-487 85-291 (344)
193 2xmz_A Hydrolase, alpha/beta h 99.4 2.8E-12 9.7E-17 133.1 16.1 104 537-653 15-118 (269)
194 2wfl_A Polyneuridine-aldehyde 99.4 6.6E-12 2.3E-16 130.2 18.7 106 536-652 8-113 (264)
195 2z3z_A Dipeptidyl aminopeptida 99.4 5.2E-11 1.8E-15 141.5 28.9 277 91-441 93-437 (706)
196 3zwl_B Eukaryotic translation 99.4 9.6E-11 3.3E-15 126.1 28.4 284 132-486 33-347 (369)
197 1xkl_A SABP2, salicylic acid-b 99.4 1.1E-11 3.7E-16 129.4 19.0 215 538-783 4-260 (273)
198 2e3j_A Epoxide hydrolase EPHB; 99.4 6.5E-12 2.2E-16 136.4 17.8 122 516-653 10-131 (356)
199 3pic_A CIP2; alpha/beta hydrol 99.4 2.8E-11 9.5E-16 128.3 21.8 118 520-655 90-221 (375)
200 3fla_A RIFR; alpha-beta hydrol 99.4 2.8E-12 9.6E-17 132.2 14.1 208 535-783 17-250 (267)
201 1l0q_A Surface layer protein; 99.4 5.3E-10 1.8E-14 122.1 33.1 256 158-487 12-277 (391)
202 2rau_A Putative esterase; NP_3 99.4 2.5E-12 8.7E-17 139.1 14.2 114 536-651 48-178 (354)
203 2q0x_A Protein DUF1749, unchar 99.4 6.2E-12 2.1E-16 135.6 17.1 104 537-654 37-146 (335)
204 3kda_A CFTR inhibitory factor 99.4 5.1E-12 1.7E-16 132.6 15.9 114 516-652 17-131 (301)
205 2wue_A 2-hydroxy-6-OXO-6-pheny 99.4 3.4E-12 1.1E-16 134.6 14.2 208 536-780 34-288 (291)
206 3bf7_A Esterase YBFF; thioeste 99.4 4.5E-12 1.5E-16 130.6 14.5 204 537-781 15-254 (255)
207 2d81_A PHB depolymerase; alpha 99.4 1.4E-12 4.7E-17 138.6 10.8 149 613-783 6-176 (318)
208 1wom_A RSBQ, sigma factor SIGB 99.4 3.7E-12 1.3E-16 132.6 13.7 210 538-783 20-271 (271)
209 1ukc_A ESTA, esterase; fungi, 99.4 8.8E-13 3E-17 150.4 9.6 233 515-762 82-327 (522)
210 2cjp_A Epoxide hydrolase; HET: 99.4 1.4E-11 4.9E-16 131.7 18.5 120 515-651 17-137 (328)
211 1isp_A Lipase; alpha/beta hydr 99.4 4.1E-12 1.4E-16 123.7 12.9 169 538-782 3-176 (181)
212 3bwx_A Alpha/beta hydrolase; Y 99.4 1.9E-11 6.5E-16 127.9 19.0 124 509-650 6-129 (285)
213 1got_B GT-beta; complex (GTP-b 99.4 6.6E-10 2.3E-14 119.6 31.6 245 132-487 56-303 (340)
214 3vgz_A Uncharacterized protein 99.4 8.4E-10 2.9E-14 118.4 32.1 248 135-482 92-352 (353)
215 4g4g_A 4-O-methyl-glucuronoyl 99.3 5.3E-11 1.8E-15 127.4 22.0 117 520-655 123-255 (433)
216 2qmq_A Protein NDRG2, protein 99.3 7.5E-12 2.6E-16 130.9 15.4 125 517-653 19-146 (286)
217 3afi_E Haloalkane dehalogenase 99.3 6.4E-12 2.2E-16 134.2 14.9 114 517-651 15-128 (316)
218 3c6x_A Hydroxynitrilase; atomi 99.3 1.5E-11 5E-16 127.1 16.7 212 539-781 4-255 (257)
219 1gxr_A ESG1, transducin-like e 99.3 1.2E-09 4E-14 116.0 31.9 271 133-483 53-335 (337)
220 4ery_A WD repeat-containing pr 99.3 6.1E-10 2.1E-14 117.9 29.5 274 131-482 23-309 (312)
221 3iuj_A Prolyl endopeptidase; h 99.3 1.3E-10 4.6E-15 137.9 26.8 261 87-442 137-408 (693)
222 2xt0_A Haloalkane dehalogenase 99.3 1.3E-11 4.3E-16 130.6 16.1 104 538-652 46-149 (297)
223 2pbi_B Guanine nucleotide-bind 99.3 5.9E-10 2E-14 120.8 29.3 261 130-466 63-342 (354)
224 1vyh_C Platelet-activating fac 99.3 3.3E-10 1.1E-14 125.5 27.6 271 130-482 107-408 (410)
225 1b6g_A Haloalkane dehalogenase 99.3 6.2E-12 2.1E-16 133.9 13.0 104 538-652 47-150 (310)
226 4h5i_A Guanine nucleotide-exch 99.3 5.7E-10 2E-14 121.6 28.9 206 134-438 136-342 (365)
227 4gqb_B Methylosome protein 50; 99.3 1.7E-10 5.9E-15 124.7 24.5 199 237-486 130-332 (344)
228 2ynn_A Coatomer subunit beta'; 99.3 5.6E-10 1.9E-14 118.1 28.0 242 133-487 15-261 (304)
229 2bkl_A Prolyl endopeptidase; m 99.3 1.2E-10 4E-15 138.4 25.0 260 139-486 75-352 (695)
230 1m33_A BIOH protein; alpha-bet 99.3 5E-12 1.7E-16 130.2 11.1 95 538-651 12-107 (258)
231 1pja_A Palmitoyl-protein thioe 99.3 1.2E-11 4.3E-16 130.4 13.9 104 535-653 33-139 (302)
232 1nr0_A Actin interacting prote 99.3 9E-10 3.1E-14 128.7 29.9 275 135-487 22-357 (611)
233 1ehy_A Protein (soluble epoxid 99.3 7.1E-11 2.4E-15 124.5 18.5 117 516-651 16-132 (294)
234 1nir_A Nitrite reductase; hemo 99.3 4.1E-09 1.4E-13 121.2 34.2 288 134-527 181-498 (543)
235 3bws_A Protein LP49; two-domai 99.3 5.9E-09 2E-13 115.4 34.0 279 135-484 126-431 (433)
236 3hfq_A Uncharacterized protein 99.3 4.4E-09 1.5E-13 113.1 31.9 210 237-487 88-321 (347)
237 3ibt_A 1H-3-hydroxy-4-oxoquino 99.3 7.3E-12 2.5E-16 128.8 9.5 116 517-653 7-123 (264)
238 3u4y_A Uncharacterized protein 99.3 2.9E-09 9.9E-14 113.4 29.3 250 136-486 44-305 (331)
239 2pm9_A Protein WEB1, protein t 99.3 1.1E-10 3.7E-15 128.5 18.5 291 133-487 14-339 (416)
240 1gxr_A ESG1, transducin-like e 99.2 5.3E-09 1.8E-13 110.9 31.0 218 216-487 65-298 (337)
241 1pby_B Quinohemoprotein amine 99.2 7.2E-10 2.5E-14 117.8 23.7 254 134-487 36-312 (337)
242 3s25_A Hypothetical 7-bladed b 99.2 8.9E-09 3.1E-13 108.7 31.6 264 85-484 20-292 (302)
243 2psd_A Renilla-luciferin 2-mon 99.2 7E-11 2.4E-15 126.2 15.5 116 516-651 28-144 (318)
244 3l80_A Putative uncharacterize 99.2 2.9E-12 1E-16 134.2 4.1 103 538-652 41-144 (292)
245 2ymu_A WD-40 repeat protein; u 99.2 1.3E-09 4.4E-14 125.7 26.2 264 132-482 304-577 (577)
246 3u4y_A Uncharacterized protein 99.2 3.4E-09 1.1E-13 112.9 27.4 203 239-487 44-254 (331)
247 1erj_A Transcriptional repress 99.2 5.2E-09 1.8E-13 115.0 29.7 200 237-487 126-343 (393)
248 1yr2_A Prolyl oligopeptidase; 99.2 2.2E-09 7.5E-14 128.4 28.5 265 87-446 171-447 (741)
249 3mkq_A Coatomer beta'-subunit; 99.2 1.8E-09 6E-14 130.1 27.4 272 133-484 15-301 (814)
250 1thg_A Lipase; hydrolase(carbo 99.2 1.1E-11 3.7E-16 142.0 7.4 231 515-762 102-359 (544)
251 3qmv_A Thioesterase, REDJ; alp 99.2 1.9E-11 6.4E-16 127.7 8.6 187 539-763 52-264 (280)
252 2vdu_B TRNA (guanine-N(7)-)-me 99.2 6.2E-09 2.1E-13 116.5 29.8 248 133-487 104-395 (450)
253 1r5m_A SIR4-interacting protei 99.2 1.7E-09 5.9E-14 118.6 24.8 294 134-484 48-424 (425)
254 1r3d_A Conserved hypothetical 99.2 1.3E-10 4.4E-15 120.3 14.6 103 538-652 16-121 (264)
255 2vdu_B TRNA (guanine-N(7)-)-me 99.2 6.9E-09 2.4E-13 116.1 29.6 204 237-483 105-337 (450)
256 3ow8_A WD repeat-containing pr 99.2 1.9E-09 6.5E-14 115.2 23.9 198 237-487 83-281 (321)
257 4h5i_A Guanine nucleotide-exch 99.2 7.9E-10 2.7E-14 120.5 21.0 201 238-486 137-344 (365)
258 3iz6_a 40S ribosomal protein R 99.2 9.1E-10 3.1E-14 120.5 21.6 281 130-486 65-376 (380)
259 3b12_A Fluoroacetate dehalogen 98.8 2.2E-12 7.4E-17 135.2 0.0 120 517-654 13-132 (304)
260 1llf_A Lipase 3; candida cylin 99.2 4.9E-12 1.7E-16 144.5 2.9 230 515-762 94-346 (534)
261 4g56_B MGC81050 protein; prote 99.2 9.1E-10 3.1E-14 119.5 20.8 200 237-486 142-344 (357)
262 3fm0_A Protein CIAO1; WDR39,SG 99.2 6.7E-09 2.3E-13 112.0 27.5 284 133-487 18-337 (345)
263 2ymu_A WD-40 repeat protein; u 99.2 1.3E-08 4.5E-13 117.2 31.0 266 132-484 263-538 (577)
264 1got_B GT-beta; complex (GTP-b 99.2 1.1E-08 3.9E-13 109.9 28.0 226 133-466 99-328 (340)
265 4gga_A P55CDC, cell division c 99.2 6.1E-09 2.1E-13 115.5 26.6 239 132-441 148-397 (420)
266 3bws_A Protein LP49; two-domai 99.2 2.2E-08 7.4E-13 110.9 31.0 227 215-487 135-392 (433)
267 4i19_A Epoxide hydrolase; stru 99.2 2.5E-09 8.7E-14 117.4 22.9 122 515-653 74-204 (388)
268 3i2n_A WD repeat-containing pr 99.1 7.2E-09 2.5E-13 111.0 25.7 283 132-486 19-354 (357)
269 3vl1_A 26S proteasome regulato 99.1 4.4E-09 1.5E-13 115.9 24.1 240 135-487 60-324 (420)
270 1nr0_A Actin interacting prote 99.1 1.5E-08 5.3E-13 118.2 29.8 309 88-486 28-398 (611)
271 2xe4_A Oligopeptidase B; hydro 99.1 8.7E-09 3E-13 123.2 27.8 208 238-483 177-398 (751)
272 2ogt_A Thermostable carboxyles 99.1 1.6E-11 5.5E-16 139.2 3.8 221 515-763 81-316 (498)
273 3ei3_B DNA damage-binding prot 99.1 1.1E-08 3.7E-13 111.5 26.4 247 133-487 75-341 (383)
274 1erj_A Transcriptional repress 99.1 8.6E-09 2.9E-13 113.3 25.5 237 133-484 125-388 (393)
275 1nir_A Nitrite reductase; hemo 99.1 4.5E-08 1.5E-12 112.5 32.2 209 237-487 282-516 (543)
276 3scy_A Hypothetical bacterial 99.1 8.1E-08 2.8E-12 103.7 32.5 165 239-442 159-342 (361)
277 2j04_A TAU60, YPL007P, hypothe 99.1 1.1E-08 3.7E-13 115.5 26.0 256 119-469 7-286 (588)
278 1jmx_B Amine dehydrogenase; ox 99.1 6.4E-09 2.2E-13 111.1 23.2 204 237-487 45-327 (349)
279 3zwl_B Eukaryotic translation 99.1 1.7E-08 6E-13 108.2 26.7 236 132-441 75-348 (369)
280 2ynn_A Coatomer subunit beta'; 99.1 1.6E-08 5.3E-13 106.9 25.6 223 133-464 57-284 (304)
281 1k8k_C P40, ARP2/3 complex 41 99.1 7.8E-09 2.7E-13 111.5 23.6 243 133-485 10-274 (372)
282 2h7c_A Liver carboxylesterase 99.1 1.1E-10 3.9E-15 133.6 9.4 133 515-655 95-234 (542)
283 1ri6_A Putative isomerase YBHE 99.1 2.3E-08 7.8E-13 106.4 26.6 213 237-494 86-317 (343)
284 3f3f_A Nucleoporin SEH1; struc 99.1 6.9E-08 2.4E-12 102.2 29.6 262 129-487 9-339 (351)
285 4aez_A CDC20, WD repeat-contai 99.1 3.9E-08 1.3E-12 108.1 28.3 243 132-487 135-382 (401)
286 2xzm_R RACK1; ribosome, transl 99.1 2.3E-08 7.7E-13 107.6 25.8 242 130-486 75-341 (343)
287 3s25_A Hypothetical 7-bladed b 99.1 3E-08 1E-12 104.6 25.9 225 87-442 61-295 (302)
288 4aow_A Guanine nucleotide-bind 99.1 5.6E-08 1.9E-12 103.3 28.3 283 129-487 36-339 (340)
289 1sq9_A Antiviral protein SKI8; 99.1 4E-08 1.4E-12 107.2 27.6 284 131-486 16-396 (397)
290 1pgu_A Actin interacting prote 99.1 2.7E-08 9.3E-13 115.1 27.7 245 132-487 19-285 (615)
291 3dwl_C Actin-related protein 2 99.0 2.7E-09 9.2E-14 115.9 17.1 243 134-484 14-280 (377)
292 3fle_A SE_1780 protein; struct 99.0 2.2E-09 7.6E-14 110.0 15.4 212 538-779 6-247 (249)
293 3frx_A Guanine nucleotide-bind 99.0 3.3E-07 1.1E-11 97.4 33.0 194 237-486 68-268 (319)
294 2wj6_A 1H-3-hydroxy-4-oxoquina 99.0 4.2E-10 1.5E-14 117.5 9.2 116 516-651 11-127 (276)
295 4gga_A P55CDC, cell division c 99.0 1.4E-07 4.8E-12 104.4 30.2 293 119-486 95-396 (420)
296 3dw8_B Serine/threonine-protei 99.0 8.1E-08 2.8E-12 106.5 27.8 249 133-442 30-376 (447)
297 3sfz_A APAF-1, apoptotic pepti 99.0 2E-08 6.9E-13 127.1 25.7 287 130-484 614-912 (1249)
298 4ggc_A P55CDC, cell division c 99.0 9.9E-08 3.4E-12 100.3 27.1 237 132-439 68-315 (318)
299 3frx_A Guanine nucleotide-bind 99.0 9.1E-08 3.1E-12 101.8 26.9 240 130-486 64-318 (319)
300 3qyj_A ALR0039 protein; alpha/ 99.0 1E-08 3.5E-13 107.8 19.2 117 516-650 12-128 (291)
301 4ggc_A P55CDC, cell division c 99.0 3.4E-07 1.1E-11 96.2 31.0 295 115-485 12-315 (318)
302 3jrp_A Fusion protein of prote 99.0 7.2E-08 2.5E-12 103.9 25.5 247 130-486 10-288 (379)
303 1ea5_A ACHE, acetylcholinester 99.0 2.6E-10 8.9E-15 130.4 6.0 222 515-761 91-331 (537)
304 2aq5_A Coronin-1A; WD40 repeat 99.0 1.9E-08 6.5E-13 110.6 20.7 254 130-487 80-344 (402)
305 2pm9_A Protein WEB1, protein t 99.0 9.5E-09 3.3E-13 112.8 18.1 242 132-442 68-340 (416)
306 1jof_A Carboxy-CIS,CIS-muconat 99.0 8.2E-08 2.8E-12 104.2 25.2 165 302-486 147-342 (365)
307 3vl1_A 26S proteasome regulato 99.0 6.1E-08 2.1E-12 106.6 24.5 250 135-486 101-366 (420)
308 1ri6_A Putative isomerase YBHE 99.0 1.2E-07 4.1E-12 100.7 26.0 168 237-442 131-313 (343)
309 3dm0_A Maltose-binding peripla 99.0 1.4E-07 4.8E-12 111.7 28.8 280 130-484 381-692 (694)
310 3k26_A Polycomb protein EED; W 99.0 2.3E-07 7.8E-12 99.4 27.9 295 130-484 17-365 (366)
311 3ds8_A LIN2722 protein; unkonw 99.0 4.6E-09 1.6E-13 108.3 13.9 154 599-783 77-243 (254)
312 4a11_B DNA excision repair pro 99.0 1.2E-07 4.2E-12 103.2 26.0 298 132-487 44-367 (408)
313 2ha2_A ACHE, acetylcholinester 98.9 6.1E-10 2.1E-14 127.6 7.1 131 515-653 93-232 (543)
314 3odt_A Protein DOA1; ubiquitin 98.9 2.2E-07 7.6E-12 97.2 26.3 264 132-487 19-298 (313)
315 3g4e_A Regucalcin; six bladed 98.9 4.1E-07 1.4E-11 95.7 28.3 232 135-472 16-263 (297)
316 1p0i_A Cholinesterase; serine 98.9 7.7E-10 2.6E-14 126.4 7.6 221 515-760 89-328 (529)
317 1yfq_A Cell cycle arrest prote 98.9 5.8E-08 2E-12 103.4 21.8 244 130-487 10-284 (342)
318 1pby_B Quinohemoprotein amine 98.9 8.7E-08 3E-12 101.5 22.6 201 238-487 37-271 (337)
319 2aq5_A Coronin-1A; WD40 repeat 98.9 4.4E-07 1.5E-11 99.6 28.7 205 237-487 84-301 (402)
320 3hfq_A Uncharacterized protein 98.9 1.6E-07 5.6E-12 100.6 24.6 166 238-442 144-322 (347)
321 3c5v_A PME-1, protein phosphat 98.9 1.3E-08 4.4E-13 108.2 15.6 101 537-651 37-144 (316)
322 2hes_X YDR267CP; beta-propelle 98.9 7.9E-08 2.7E-12 102.8 21.6 203 237-485 110-328 (330)
323 2xzm_R RACK1; ribosome, transl 98.9 5.2E-07 1.8E-11 96.8 28.0 194 237-487 79-287 (343)
324 3g02_A Epoxide hydrolase; alph 98.9 2.2E-08 7.4E-13 110.5 17.1 121 517-653 93-220 (408)
325 2pm7_B Protein transport prote 98.9 5E-07 1.7E-11 94.9 26.8 245 131-484 9-284 (297)
326 3sfz_A APAF-1, apoptotic pepti 98.9 2.8E-08 9.5E-13 125.8 20.2 271 133-487 842-1160(1249)
327 1k8k_C P40, ARP2/3 complex 41 98.9 1.7E-07 5.9E-12 100.8 23.7 215 132-439 53-274 (372)
328 1jmx_B Amine dehydrogenase; ox 98.9 1.1E-07 3.6E-12 101.5 21.8 72 366-449 262-335 (349)
329 1qks_A Cytochrome CD1 nitrite 98.9 3.6E-06 1.2E-10 96.8 35.8 248 238-527 243-522 (567)
330 3ils_A PKS, aflatoxin biosynth 98.9 6.5E-09 2.2E-13 107.8 11.7 101 536-652 19-122 (265)
331 3mmy_A MRNA export factor; mRN 98.9 2.3E-07 7.7E-12 99.4 23.6 244 130-469 38-334 (368)
332 2fj0_A JuvenIle hormone estera 98.9 1.2E-09 4.1E-14 125.3 5.9 129 515-653 87-233 (551)
333 2j04_A TAU60, YPL007P, hypothe 98.9 1.2E-07 4.1E-12 107.0 21.8 185 237-469 132-349 (588)
334 1kez_A Erythronolide synthase; 98.9 1.1E-08 3.6E-13 108.2 12.3 206 535-783 64-282 (300)
335 1pgu_A Actin interacting prote 98.8 4.7E-07 1.6E-11 104.6 26.7 200 237-486 119-329 (615)
336 3e5z_A Putative gluconolactona 98.8 1.5E-06 5E-11 91.0 28.0 238 134-487 30-288 (296)
337 3ei3_B DNA damage-binding prot 98.8 4.2E-07 1.4E-11 98.7 24.7 245 130-438 117-381 (383)
338 3scy_A Hypothetical bacterial 98.8 2E-06 6.8E-11 92.7 29.6 174 303-487 158-341 (361)
339 3v7d_B Cell division control p 98.8 4.2E-06 1.4E-10 93.4 33.1 259 130-470 161-451 (464)
340 3gre_A Serine/threonine-protei 98.8 2.8E-07 9.4E-12 102.2 23.2 246 130-448 62-368 (437)
341 3lcr_A Tautomycetin biosynthet 98.8 3.5E-08 1.2E-12 105.3 14.7 208 536-783 79-303 (319)
342 1vyh_C Platelet-activating fac 98.8 8.6E-07 2.9E-11 97.8 26.3 220 215-487 121-371 (410)
343 4e54_B DNA damage-binding prot 98.8 9E-08 3.1E-12 106.5 18.5 206 237-487 167-389 (435)
344 4ery_A WD repeat-containing pr 98.8 2.6E-06 9E-11 89.6 28.8 220 215-487 36-270 (312)
345 4aow_A Guanine nucleotide-bind 98.8 3E-07 1E-11 97.6 21.4 236 131-441 86-339 (340)
346 2ghs_A AGR_C_1268P; regucalcin 98.8 5.7E-06 2E-10 88.2 31.1 230 135-472 52-293 (326)
347 2mad_H Methylamine dehydrogena 98.8 2.5E-06 8.6E-11 92.9 28.7 73 412-487 272-352 (373)
348 1sq9_A Antiviral protein SKI8; 98.8 6.9E-07 2.4E-11 97.2 24.3 245 132-441 63-397 (397)
349 2bce_A Cholesterol esterase; h 98.8 4.4E-09 1.5E-13 120.8 7.0 134 513-652 75-222 (579)
350 3vu4_A KMHSV2; beta-propeller 98.8 1.5E-06 5.1E-11 93.9 26.7 234 132-486 20-272 (355)
351 2dg1_A DRP35, lactonase; beta 98.8 5.8E-06 2E-10 87.8 31.0 211 237-485 89-316 (333)
352 4e54_B DNA damage-binding prot 98.8 5.5E-08 1.9E-12 108.3 15.6 245 130-442 163-433 (435)
353 3dm0_A Maltose-binding peripla 98.8 3.9E-07 1.3E-11 107.9 23.7 232 130-438 429-692 (694)
354 3fm0_A Protein CIAO1; WDR39,SG 98.8 8.5E-07 2.9E-11 95.3 24.0 251 129-442 59-338 (345)
355 3mkq_A Coatomer beta'-subunit; 98.8 8.7E-07 3E-11 106.5 26.7 222 215-487 26-261 (814)
356 2k2q_B Surfactin synthetase th 98.8 7.7E-09 2.6E-13 105.2 6.9 92 536-643 11-109 (242)
357 2oiz_A Aromatic amine dehydrog 98.8 5.5E-06 1.9E-10 89.8 30.0 91 365-463 260-360 (361)
358 3lp5_A Putative cell surface h 98.7 1.3E-07 4.4E-12 96.9 15.8 198 539-780 5-232 (250)
359 4aez_A CDC20, WD repeat-contai 98.7 2.5E-06 8.5E-11 93.5 27.2 198 237-487 137-338 (401)
360 1dx4_A ACHE, acetylcholinester 98.7 1.6E-08 5.6E-13 116.6 9.9 117 535-653 138-267 (585)
361 1yfq_A Cell cycle arrest prote 98.7 1E-06 3.6E-11 93.5 23.3 224 132-469 57-311 (342)
362 1gpl_A RP2 lipase; serine este 98.7 1.9E-08 6.7E-13 111.8 9.8 113 536-653 68-181 (432)
363 2xyi_A Probable histone-bindin 98.7 1.2E-06 4.2E-11 97.1 24.6 206 237-486 184-411 (430)
364 2hes_X YDR267CP; beta-propelle 98.7 1.5E-06 5.1E-11 92.7 24.3 204 237-486 61-281 (330)
365 2oiz_A Aromatic amine dehydrog 98.7 2.5E-06 8.6E-11 92.5 26.3 68 412-486 259-335 (361)
366 3jro_A Fusion protein of prote 98.7 2.6E-07 9E-12 110.5 19.4 248 130-486 8-286 (753)
367 3sjl_D Methylamine dehydrogena 98.7 2.1E-05 7.3E-10 85.2 32.1 110 368-487 236-365 (386)
368 2pbi_B Guanine nucleotide-bind 98.7 4E-06 1.4E-10 90.4 26.6 222 215-487 77-317 (354)
369 2j04_B YDR362CP, TAU91; beta p 98.7 2.2E-07 7.5E-12 106.1 17.3 201 237-486 210-429 (524)
370 1tca_A Lipase; hydrolase(carbo 98.7 1.1E-07 3.8E-12 101.1 13.8 120 520-654 14-136 (317)
371 3iz6_a 40S ribosomal protein R 98.7 1.1E-06 3.7E-11 95.8 21.1 240 134-440 111-376 (380)
372 3bix_A Neuroligin-1, neuroligi 98.7 2.3E-08 7.7E-13 115.2 7.7 130 515-652 108-248 (574)
373 3bg1_A Protein SEC13 homolog; 98.7 6.7E-07 2.3E-11 94.8 18.8 248 130-484 12-292 (316)
374 1r5m_A SIR4-interacting protei 98.6 5.7E-06 2E-10 90.2 26.4 216 216-487 60-321 (425)
375 2oaj_A Protein SNI1; WD40 repe 98.6 2.1E-06 7.2E-11 104.7 25.0 208 133-443 19-246 (902)
376 3lrv_A PRE-mRNA-splicing facto 98.6 2.6E-06 9E-11 91.2 23.0 157 301-486 127-293 (343)
377 4a11_B DNA excision repair pro 98.6 1.7E-06 5.7E-11 94.1 21.4 247 130-442 98-368 (408)
378 3v7d_B Cell division control p 98.6 4.4E-06 1.5E-10 93.2 24.8 208 237-487 165-383 (464)
379 2ovr_B FBW7, F-BOX/WD repeat p 98.6 3.6E-05 1.2E-09 85.3 31.3 268 132-486 160-443 (445)
380 2mad_H Methylamine dehydrogena 98.6 1.7E-05 5.8E-10 86.3 27.2 77 365-445 273-356 (373)
381 3dwl_C Actin-related protein 2 98.6 3.3E-07 1.1E-11 99.2 13.2 215 130-438 54-280 (377)
382 3c75_H MADH, methylamine dehyd 98.6 1.7E-05 5.6E-10 87.5 26.4 72 412-487 324-404 (426)
383 4gq1_A NUP37; propeller, trans 98.5 1.3E-06 4.6E-11 95.7 17.7 199 237-468 139-377 (393)
384 3jrp_A Fusion protein of prote 98.5 4E-06 1.4E-10 90.0 20.6 209 131-440 55-288 (379)
385 3dr2_A Exported gluconolactona 98.5 1.3E-05 4.4E-10 84.4 23.6 153 304-483 135-304 (305)
386 1bu8_A Protein (pancreatic lip 98.5 2.1E-07 7.1E-12 103.9 9.5 114 535-653 67-181 (452)
387 3dsm_A Uncharacterized protein 98.5 2.3E-05 7.7E-10 83.6 24.8 201 237-487 86-303 (328)
388 2oaj_A Protein SNI1; WD40 repe 98.5 4.8E-06 1.7E-10 101.5 21.6 159 298-487 574-785 (902)
389 1jof_A Carboxy-CIS,CIS-muconat 98.4 0.00031 1E-08 75.7 33.1 211 237-487 42-294 (365)
390 1w52_X Pancreatic lipase relat 98.4 3.4E-07 1.2E-11 102.1 9.5 114 535-653 67-181 (452)
391 3dw8_B Serine/threonine-protei 98.4 4.9E-06 1.7E-10 92.0 18.9 117 237-395 229-375 (447)
392 1ei9_A Palmitoyl protein thioe 98.4 1.9E-06 6.5E-11 89.8 13.7 104 540-651 7-114 (279)
393 2xyi_A Probable histone-bindin 98.4 6.9E-06 2.4E-10 91.0 18.8 161 237-438 234-409 (430)
394 1ys1_X Lipase; CIS peptide Leu 98.4 8.3E-07 2.8E-11 94.4 10.3 104 536-652 6-113 (320)
395 1ex9_A Lactonizing lipase; alp 98.4 5.5E-07 1.9E-11 94.3 8.7 101 536-652 5-108 (285)
396 3dsm_A Uncharacterized protein 98.4 7.6E-05 2.6E-09 79.5 25.5 177 275-487 64-255 (328)
397 2ovr_B FBW7, F-BOX/WD repeat p 98.4 0.00025 8.4E-09 78.5 30.4 257 138-487 124-393 (445)
398 3n2z_B Lysosomal Pro-X carboxy 98.3 1.6E-06 5.3E-11 96.1 11.7 113 537-651 38-159 (446)
399 3icv_A Lipase B, CALB; circula 98.3 1.1E-06 3.7E-11 92.4 9.7 119 522-655 50-171 (316)
400 3i2n_A WD repeat-containing pr 98.3 4E-05 1.4E-09 81.4 22.4 204 237-486 21-244 (357)
401 3c75_H MADH, methylamine dehyd 98.3 6.8E-05 2.3E-09 82.6 24.4 78 365-446 325-409 (426)
402 2pm7_B Protein transport prote 98.3 8.6E-05 2.9E-09 77.6 24.2 202 237-486 12-239 (297)
403 1qks_A Cytochrome CD1 nitrite 98.3 0.00026 8.9E-09 81.2 29.9 212 237-487 300-540 (567)
404 2cb9_A Fengycin synthetase; th 98.3 4.1E-06 1.4E-10 85.3 13.3 91 537-652 21-114 (244)
405 1hpl_A Lipase; hydrolase(carbo 98.3 8.1E-07 2.8E-11 98.6 8.5 113 535-652 66-179 (449)
406 2w18_A PALB2, fancn, partner a 98.3 7.9E-05 2.7E-09 79.0 23.1 153 305-483 184-355 (356)
407 2j04_B YDR362CP, TAU91; beta p 98.3 1.6E-05 5.6E-10 90.5 19.2 179 237-465 269-458 (524)
408 4gq1_A NUP37; propeller, trans 98.3 5.8E-06 2E-10 90.5 14.9 50 383-437 338-387 (393)
409 3odt_A Protein DOA1; ubiquitin 98.3 0.00051 1.7E-08 71.2 29.1 214 216-487 31-257 (313)
410 1pjx_A Dfpase, DIISOPROPYLFLUO 98.3 0.00019 6.6E-09 74.9 25.6 160 303-486 120-300 (314)
411 1rp1_A Pancreatic lipase relat 98.2 1.6E-06 5.3E-11 96.4 8.3 112 535-652 67-179 (450)
412 3k26_A Polycomb protein EED; W 98.2 5.6E-05 1.9E-09 80.5 20.1 220 215-487 35-320 (366)
413 3sjl_D Methylamine dehydrogena 98.2 0.00019 6.7E-09 77.6 24.2 251 137-487 38-322 (386)
414 1p22_A F-BOX/WD-repeat protein 98.2 0.00056 1.9E-08 75.5 28.0 190 238-486 177-366 (435)
415 3fvz_A Peptidyl-glycine alpha- 98.2 0.00064 2.2E-08 72.1 27.1 202 238-484 94-321 (329)
416 2dst_A Hypothetical protein TT 98.1 7.6E-06 2.6E-10 74.5 9.8 96 516-642 9-104 (131)
417 3gre_A Serine/threonine-protei 98.1 0.00016 5.3E-09 79.8 22.4 209 237-487 66-294 (437)
418 3lrv_A PRE-mRNA-splicing facto 98.1 0.00033 1.1E-08 74.6 24.1 158 237-440 128-293 (343)
419 1jmk_C SRFTE, surfactin synthe 98.1 7E-06 2.4E-10 82.4 10.3 89 538-652 17-108 (230)
420 1mda_H Methylamine dehydrogena 98.1 0.00021 7.3E-09 77.2 22.6 73 412-487 269-348 (368)
421 2x5x_A PHB depolymerase PHAZ7; 98.1 3.5E-06 1.2E-10 90.1 8.3 109 538-653 40-165 (342)
422 1mda_H Methylamine dehydrogena 98.1 9E-05 3.1E-09 80.1 18.7 80 365-449 270-356 (368)
423 2hfk_A Pikromycin, type I poly 98.1 5.8E-06 2E-10 87.9 9.0 209 540-784 91-313 (319)
424 1npe_A Nidogen, entactin; glyc 98.1 0.0014 4.8E-08 67.1 26.8 164 238-448 82-247 (267)
425 3f3f_A Nucleoporin SEH1; struc 98.1 0.00049 1.7E-08 72.0 23.5 213 237-486 14-250 (351)
426 3mmy_A MRNA export factor; mRN 98.1 0.0008 2.7E-08 71.3 25.0 201 237-487 42-306 (368)
427 3vu4_A KMHSV2; beta-propeller 98.0 0.0011 3.6E-08 71.2 26.0 205 134-440 61-272 (355)
428 3hrp_A Uncharacterized protein 98.0 0.0012 4.1E-08 72.5 26.6 163 240-442 176-357 (409)
429 3jro_A Fusion protein of prote 98.0 8.7E-05 3E-09 88.6 18.8 201 237-486 12-239 (753)
430 1npe_A Nidogen, entactin; glyc 98.0 0.01 3.5E-07 60.4 31.5 200 237-487 38-240 (267)
431 3g4e_A Regucalcin; six bladed 98.0 0.0023 7.7E-08 66.7 26.2 194 238-487 16-231 (297)
432 3e5z_A Putative gluconolactona 98.0 0.0011 3.8E-08 68.7 23.6 192 238-485 31-246 (296)
433 2iwa_A Glutamine cyclotransfer 98.0 0.00074 2.5E-08 69.2 21.4 199 238-486 24-238 (266)
434 3tej_A Enterobactin synthase c 97.9 3.2E-05 1.1E-09 82.5 11.4 102 536-653 99-204 (329)
435 1p22_A F-BOX/WD-repeat protein 97.9 0.00066 2.3E-08 74.9 22.4 172 276-486 234-415 (435)
436 1rwi_B Serine/threonine-protei 97.9 0.0023 7.9E-08 65.0 23.9 194 237-485 69-264 (270)
437 2zyr_A Lipase, putative; fatty 97.9 6.7E-06 2.3E-10 91.0 4.7 113 536-654 20-167 (484)
438 2qe8_A Uncharacterized protein 97.8 0.0014 4.8E-08 70.0 21.3 206 237-470 69-309 (343)
439 2oit_A Nucleoporin 214KDA; NH2 97.8 0.00043 1.5E-08 76.8 17.5 124 133-334 94-222 (434)
440 3nol_A Glutamine cyclotransfer 97.8 0.0035 1.2E-07 63.6 22.4 194 238-483 46-254 (262)
441 3sov_A LRP-6, low-density lipo 97.7 0.041 1.4E-06 57.9 31.2 199 238-487 38-240 (318)
442 2w18_A PALB2, fancn, partner a 97.7 0.00075 2.5E-08 71.5 17.3 123 238-391 230-355 (356)
443 3bg1_A Protein SEC13 homolog; 97.7 0.00046 1.6E-08 72.7 15.6 203 237-485 16-247 (316)
444 3no2_A Uncharacterized protein 97.7 0.0056 1.9E-07 63.2 23.4 196 237-486 39-253 (276)
445 3tjm_A Fatty acid synthase; th 97.7 0.00019 6.6E-09 74.5 11.9 95 536-651 22-122 (283)
446 2p4o_A Hypothetical protein; p 97.7 0.025 8.5E-07 59.0 28.4 97 366-471 174-278 (306)
447 1q7f_A NHL, brain tumor CG1071 97.7 0.019 6.3E-07 58.9 27.0 153 302-485 123-280 (286)
448 3v65_B Low-density lipoprotein 97.7 0.018 6.1E-07 62.5 28.0 162 238-446 162-325 (386)
449 2hih_A Lipase 46 kDa form; A1 97.6 0.00018 6.2E-09 79.1 10.9 115 536-652 50-211 (431)
450 3v64_C Agrin; beta propeller, 97.6 0.049 1.7E-06 58.1 29.7 198 238-487 76-277 (349)
451 3nok_A Glutaminyl cyclase; bet 97.6 0.0082 2.8E-07 60.9 21.8 191 238-483 58-264 (268)
452 3v65_B Low-density lipoprotein 97.6 0.03 1E-06 60.7 27.9 199 237-487 118-320 (386)
453 2z2n_A Virginiamycin B lyase; 97.6 0.05 1.7E-06 55.5 28.4 193 237-486 59-255 (299)
454 3v64_C Agrin; beta propeller, 97.5 0.047 1.6E-06 58.3 28.5 162 238-446 119-282 (349)
455 1ijq_A LDL receptor, low-densi 97.5 0.088 3E-06 55.2 30.1 200 237-487 32-240 (316)
456 3dr2_A Exported gluconolactona 97.5 0.0065 2.2E-07 63.4 21.0 194 238-486 48-268 (305)
457 1ijq_A LDL receptor, low-densi 97.5 0.12 4E-06 54.2 30.6 163 238-446 80-245 (316)
458 3hrp_A Uncharacterized protein 97.5 0.013 4.3E-07 64.3 23.5 197 238-487 134-356 (409)
459 4ebb_A Dipeptidyl peptidase 2; 97.4 0.0006 2E-08 76.2 11.9 115 536-652 41-162 (472)
460 2dsn_A Thermostable lipase; T1 97.4 0.00059 2E-08 73.9 11.4 102 537-651 5-162 (387)
461 3qqz_A Putative uncharacterize 97.4 0.024 8.3E-07 57.5 22.5 207 237-484 29-252 (255)
462 1fwx_A Nitrous oxide reductase 97.4 0.017 5.9E-07 65.3 23.2 122 364-494 282-438 (595)
463 2z2n_A Virginiamycin B lyase; 97.4 0.1 3.5E-06 53.1 27.8 190 238-486 102-296 (299)
464 3sov_A LRP-6, low-density lipo 97.4 0.047 1.6E-06 57.5 25.4 162 238-446 82-245 (318)
465 3mbr_X Glutamine cyclotransfer 97.4 0.026 9E-07 56.6 22.0 194 238-483 24-233 (243)
466 3p5b_L Low density lipoprotein 97.4 0.16 5.6E-06 55.1 30.3 164 238-447 162-328 (400)
467 3p5b_L Low density lipoprotein 97.4 0.065 2.2E-06 58.3 27.1 201 237-487 114-322 (400)
468 3qqz_A Putative uncharacterize 97.3 0.11 3.8E-06 52.6 26.5 228 117-438 13-252 (255)
469 1fwx_A Nitrous oxide reductase 97.3 0.002 6.7E-08 73.0 13.9 80 304-393 281-361 (595)
470 2dg1_A DRP35, lactonase; beta 97.3 0.017 5.8E-07 60.6 20.6 159 302-485 47-213 (333)
471 2qc5_A Streptogramin B lactona 97.3 0.2 6.8E-06 50.9 28.5 193 238-486 65-260 (300)
472 2ghs_A AGR_C_1268P; regucalcin 97.3 0.022 7.5E-07 60.1 21.5 152 302-484 51-209 (326)
473 1rwi_B Serine/threonine-protei 97.3 0.013 4.4E-07 59.3 19.0 152 238-438 111-263 (270)
474 2ece_A 462AA long hypothetical 97.2 0.037 1.3E-06 60.4 23.0 39 134-172 140-178 (462)
475 3fvz_A Peptidyl-glycine alpha- 97.2 0.13 4.6E-06 53.9 27.0 115 302-438 198-321 (329)
476 3m0c_C LDL receptor, low-densi 97.2 0.2 6.9E-06 59.4 30.8 163 238-446 474-639 (791)
477 2oit_A Nucleoporin 214KDA; NH2 97.2 0.0064 2.2E-07 67.2 16.7 169 302-486 95-279 (434)
478 1q7f_A NHL, brain tumor CG1071 97.1 0.29 9.8E-06 49.7 27.7 153 238-438 124-279 (286)
479 2iwa_A Glutamine cyclotransfer 97.1 0.054 1.8E-06 55.3 20.9 155 302-487 23-183 (266)
480 3m0c_C LDL receptor, low-densi 97.0 0.14 4.6E-06 60.9 27.3 199 238-487 427-634 (791)
481 2qc5_A Streptogramin B lactona 97.0 0.25 8.5E-06 50.2 26.4 187 238-484 107-299 (300)
482 2ece_A 462AA long hypothetical 97.0 0.43 1.5E-05 52.1 28.7 206 242-484 89-351 (462)
483 2fp8_A Strictosidine synthase; 96.9 0.23 8E-06 51.7 24.9 157 302-485 128-313 (322)
484 3tc9_A Hypothetical hydrolase; 96.8 0.17 5.9E-06 55.5 24.2 121 237-393 181-301 (430)
485 1whs_A Serine carboxypeptidase 96.8 0.0039 1.3E-07 63.0 9.6 145 509-658 22-191 (255)
486 3nol_A Glutamine cyclotransfer 96.8 0.17 5.9E-06 51.1 21.5 155 300-487 43-203 (262)
487 1ivy_A Human protective protei 96.7 0.0029 1E-07 70.0 8.7 134 513-656 26-184 (452)
488 3mbr_X Glutamine cyclotransfer 96.7 0.23 7.7E-06 49.7 21.5 150 242-437 70-233 (243)
489 4a0p_A LRP6, LRP-6, low-densit 96.6 0.87 3E-05 52.5 28.6 157 238-442 83-240 (628)
490 2vpj_A Kelch-like protein 12; 96.4 0.63 2.2E-05 47.7 24.1 195 274-494 77-285 (301)
491 4hw6_A Hypothetical protein, I 96.3 0.36 1.2E-05 53.0 22.3 70 304-393 232-304 (433)
492 4a0p_A LRP6, LRP-6, low-densit 96.3 2.4 8.2E-05 48.8 30.5 196 238-487 40-239 (628)
493 2qe8_A Uncharacterized protein 96.3 0.2 6.8E-06 52.9 19.4 148 134-335 122-278 (343)
494 1n7d_A LDL receptor, low-densi 96.1 0.01 3.5E-07 69.8 8.9 199 238-487 409-616 (699)
495 1n7d_A LDL receptor, low-densi 96.1 0.017 5.7E-07 68.0 10.6 164 238-448 456-623 (699)
496 3kya_A Putative phosphatase; s 96.1 1.1 3.7E-05 49.8 24.4 131 238-393 189-341 (496)
497 3no2_A Uncharacterized protein 96.0 0.4 1.4E-05 49.0 19.3 179 274-487 14-197 (276)
498 3s94_A LRP-6, low-density lipo 95.9 0.64 2.2E-05 53.5 22.9 199 238-487 43-245 (619)
499 3nok_A Glutaminyl cyclase; bet 95.9 0.66 2.3E-05 46.9 19.9 151 301-487 56-212 (268)
500 1pjx_A Dfpase, DIISOPROPYLFLUO 95.8 0.33 1.1E-05 49.7 18.1 118 238-394 175-300 (314)
No 1
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=100.00 E-value=1.6e-98 Score=896.68 Aligned_cols=677 Identities=41% Similarity=0.750 Sum_probs=587.5
Q ss_pred CCCCCCCCCccccCCceeeeecCccccCCCCcccCCCCHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHhhhcCCCCCC
Q 003878 6 GIDESLQYPVARRDESVVDDYHGVKIVDPYRWLEDPDAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSPRYDA 85 (789)
Q Consensus 6 ~~~~~~~~p~~~~~~~~~~~~~g~~~~D~y~wled~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (789)
.....+.||+|+|+|+ ++++||+++.|||+||||.++|||++||++||+||+++|++++++++|++||+++++++++++
T Consensus 5 ~~~~~~~~p~~~~~~~-~~~~~g~~~~d~y~wl~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 83 (693)
T 3iuj_A 5 SGKARLHYPVTRQGEQ-VDHYFGQAVADPYRWLEDDRSPETEAWVKAQNAVTQDYLAQIPYRAAIKEKLAASWNYAKEGA 83 (693)
T ss_dssp -----CCCCCCCCCCC-EEEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHSCCCEECC
T ss_pred ccccCCCCCCCCCCCe-EEEeCCccccCCchhhcCCCCHHHHHHHHHHHHHHHHHHccChhHHHHHHHHHHhhccccCCC
Confidence 3344578999999995 899999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEeCCEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEc
Q 003878 86 PFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRI 165 (789)
Q Consensus 86 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl 165 (789)
|.++|+++||++++++++|+++||++ .++++++|||+|++++++++.+++++|||||++|||+++.+|+++++|+++|+
T Consensus 84 p~~~g~~~y~~~~~~~~~~~~~~r~~-~~~~~~vllD~n~la~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl 162 (693)
T 3iuj_A 84 PFREGRYHYFFKNDGLQNQNVLWRQQ-EGKPAEVFLDPNTLSPDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDV 162 (693)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEEC-TTSCCEEEECGGGGSTTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEET
T ss_pred CEEECCEEEEEEEcCCCceeEEEEeC-CCCCcEEEEehhhccCCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEEC
Confidence 99999999999999999999899875 46778999999999999988999999999999999999999999999999999
Q ss_pred CCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeecccccceEEEEeC
Q 003878 166 EDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHD 245 (789)
Q Consensus 166 ~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspD 245 (789)
+||+.+++.+.++ +..+++|| |
T Consensus 163 ~tg~~~~~~~~~~---------------------------------------------------------k~~~~~Ws-D 184 (693)
T 3iuj_A 163 ESKQPLETPLKDV---------------------------------------------------------KFSGISWL-G 184 (693)
T ss_dssp TTCSEEEEEEEEE---------------------------------------------------------ESCCCEEE-T
T ss_pred CCCCCCccccCCc---------------------------------------------------------eeccEEEe-C
Confidence 9998877655554 35789999 9
Q ss_pred CcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCC-CCeeEEEEEEecCCcEEEEEEEcCCCC
Q 003878 246 SKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPE-HPKYIFSGHVTEDGQYLVMCIEENCDP 324 (789)
Q Consensus 246 g~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~SpDG~~l~~~~~~~~~~ 324 (789)
|++|+|++.+.+. .+..++.+++.+||+|++++++.++++++++++ ++.++.++.|||||++|++.+.... .
T Consensus 185 g~~l~y~~~~~~~------~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~-~ 257 (693)
T 3iuj_A 185 NEGFFYSSYDKPD------GSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST-S 257 (693)
T ss_dssp TTEEEEEESSCCC-------------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS-S
T ss_pred CCEEEEEEecCcc------cccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC-C
Confidence 9999999987531 123445678899999999999999999999876 5666678999999999999886554 2
Q ss_pred ceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC--CeEEecc
Q 003878 325 VNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN--DWFEVIP 402 (789)
Q Consensus 325 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~--~~~~l~~ 402 (789)
.++||++|++++. ..+..+....+..+..++++|+.|||++|.++++++|+++|+++++ .|+++++
T Consensus 258 ~~~i~~~d~~~~~------------~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~ 325 (693)
T 3iuj_A 258 GNRLYVKDLSQEN------------APLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIP 325 (693)
T ss_dssp CCEEEEEETTSTT------------CCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEEC
T ss_pred CcEEEEEECCCCC------------CceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEec
Confidence 4699999998742 2245555555545555889999999999998889999999998875 4789999
Q ss_pred CCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-CeeEEEeecccCCcEEEEEEcCCCCCcEEEEE
Q 003878 403 EAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISFTSFLIPGIVYQC 481 (789)
Q Consensus 403 ~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~-~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~ 481 (789)
+.+. .+ ++++.+ ++|++.+.+++.++|++++++ |...+.|+++ .+.+..++++++++.++++++++++|+++|.+
T Consensus 326 ~~~~-~~-~~s~~g-~~lv~~~~~~g~~~l~~~d~~-g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~ 401 (693)
T 3iuj_A 326 ERQQ-VL-TVHSGS-GYLFAEYMVDATARVEQFDYE-GKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRF 401 (693)
T ss_dssp CCSS-CE-EEEEET-TEEEEEEEETTEEEEEEECTT-SCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEE
T ss_pred CCCC-EE-EEEEEC-CEEEEEEEECCeeEEEEEECC-CCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEE
Confidence 8754 45 777776 899999999999999999998 4444778776 56777888889999999999999999999999
Q ss_pred ECCCCCceEEEeeeccCCCCCCCCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHH
Q 003878 482 NLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRT 561 (789)
Q Consensus 482 dl~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~ 561 (789)
|+.+++ .++++.... .+++..+.++++++++.|| ++||+++++|++...+++.|+||++|||++.+..+.|+....
T Consensus 402 d~~~g~--~~~l~~~~~-~~~~~~~~~~~~~~~~~dg-~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~ 477 (693)
T 3iuj_A 402 EPKSGA--ISLYRASAA-PFKPEDYVSEQRFYQSKDG-TRVPLIISYRKGLKLDGSNPTILYGYGGFDVSLTPSFSVSVA 477 (693)
T ss_dssp CTTTCC--EEEEECCCS-SCCGGGEEEEEEEEECTTS-CEEEEEEEEESSCCCSSCCCEEEECCCCTTCCCCCCCCHHHH
T ss_pred ECCCCe--EEEEEeCCC-CcChhhCeeEEEEEecCCC-cEEEEEEEecCCCCCCCCccEEEEECCCCCcCCCCccCHHHH
Confidence 999885 677776544 4777888999999999999 999999999998766789999999999999999999998777
Q ss_pred HHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC
Q 003878 562 ILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD 641 (789)
Q Consensus 562 ~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd 641 (789)
.|++ +||+|+++|+||+|++|+.|+.++....+.+.++|+++++++|++++++|++||+|+|+|+||++++++++++|+
T Consensus 478 ~l~~-~G~~v~~~d~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~~~~~p~ 556 (693)
T 3iuj_A 478 NWLD-LGGVYAVANLRGGGEYGQAWHLAGTQQNKQNVFDDFIAAAEYLKAEGYTRTDRLAIRGGSNGGLLVGAVMTQRPD 556 (693)
T ss_dssp HHHH-TTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCTT
T ss_pred HHHH-CCCEEEEEeCCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHhhCcc
Confidence 7777 999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceeEEEecCCcccccccccccCCccchhhcCCCCcHHH-HHHHHhcCcccCCCC-CCCCCCCCCCCCCeEEEEecCCCCC
Q 003878 642 LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEE-FYWLIKYSPLHNVRR-PWEQNPDKPFQYPSTLLLTADHDDR 719 (789)
Q Consensus 642 ~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~-~~~l~~~sP~~~v~~-~~~~~~~~~~~~pp~Li~~g~~D~~ 719 (789)
+|+|+|+.+|++|+..++.++.+..|..+||+|.+++. +++|.++||+++++. + .+||+||+||.+|++
T Consensus 557 ~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~sp~~~~~~~~---------~~Pp~Li~~G~~D~~ 627 (693)
T 3iuj_A 557 LMRVALPAVGVLDMLRYHTFTAGTGWAYDYGTSADSEAMFDYLKGYSPLHNVRPGV---------SYPSTMVTTADHDDR 627 (693)
T ss_dssp SCSEEEEESCCCCTTTGGGSGGGGGCHHHHCCTTSCHHHHHHHHHHCHHHHCCTTC---------CCCEEEEEEESSCSS
T ss_pred ceeEEEecCCcchhhhhccCCCchhHHHHcCCccCHHHHHHHHHhcCHHHhhcccC---------CCCceeEEecCCCCC
Confidence 99999999999999998887777788899999988777 889999999999998 5 578899999999999
Q ss_pred CCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCC
Q 003878 720 VVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 720 V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
||++++.+|+++|++. ..+|+++++++++++||++..+..+..+..+.+++||.++||..
T Consensus 628 v~~~~~~~~~~~l~~~-------~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 687 (693)
T 3iuj_A 628 VVPAHSFKFAATLQAD-------NAGPHPQLIRIETNAGHGAGTPVAKLIEQSADIYAFTLYEMGYR 687 (693)
T ss_dssp SCTHHHHHHHHHHHHH-------CCSSSCEEEEEEC-------CHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred CChhHHHHHHHHHHhh-------CCCCCCEEEEEeCCCCCCCcccHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999987 33468999999999999998765666889999999999999875
No 2
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=100.00 E-value=9.5e-95 Score=867.51 Aligned_cols=700 Identities=56% Similarity=1.047 Sum_probs=606.4
Q ss_pred CCCCccccCCceeeeecCccccCCCCcccCCCCHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHhhhcCCCCCCceEeC
Q 003878 11 LQYPVARRDESVVDDYHGVKIVDPYRWLEDPDAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSPRYDAPFKRG 90 (789)
Q Consensus 11 ~~~p~~~~~~~~~~~~~g~~~~D~y~wled~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 90 (789)
+.||+|+|+|++++++||+++.|||+||||+++|++++||++||++++++|++++++++|.++|+++++.++++.|.++|
T Consensus 4 ~~~p~~~~~~~~~~~~~g~~~~d~y~wl~~~~~~~~~~~~~~en~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~dG 83 (710)
T 2xdw_A 4 FQYPDVYRDETAIQDYHGHKVCDPYAWLEDPDSEQTKAFVEAQNKITVPFLEQCPIRGLYKERMTELYDYPKYSCHFKKG 83 (710)
T ss_dssp SCCCCCCCCTTCEEEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHHHHHHCSCEECCCEEET
T ss_pred CCCCCCCCCCCeeeeeCCcEEccCChhhcCCCCHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHhhccccCCCCEEEC
Confidence 57999999993479999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCce
Q 003878 91 NKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV 170 (789)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~ 170 (789)
+++||+++.+++++..||+++..++++++|+|+|+|++++++.+.+++|||||++|||+.+.+|+++++|+++|+++|+.
T Consensus 84 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~ 163 (710)
T 2xdw_A 84 KRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKE 163 (710)
T ss_dssp TEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEE
T ss_pred CEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCC
Confidence 99999999998888899999877788899999999999988899999999999999999999999999999999999987
Q ss_pred ecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEE
Q 003878 171 EADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFF 250 (789)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~ 250 (789)
++..+.+. ++.+++|||||+.|+
T Consensus 164 ~~~~~~~~---------------------------------------------------------~~~~~~wspDg~~l~ 186 (710)
T 2xdw_A 164 LPDVLERV---------------------------------------------------------KFSCMAWTHDGKGMF 186 (710)
T ss_dssp EEEEEEEE---------------------------------------------------------CSCCEEECTTSSEEE
T ss_pred CcccccCc---------------------------------------------------------ccceEEEEeCCCEEE
Confidence 76544443 347899999999999
Q ss_pred EEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEE
Q 003878 251 YSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYY 330 (789)
Q Consensus 251 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~ 330 (789)
|++.+..... ..+..++..++.+||+|++++++.+++++++.++++.+..++.|||||++|++.+.+..+..++||+
T Consensus 187 ~~~~~~~~~~---~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~ 263 (710)
T 2xdw_A 187 YNAYPQQDGK---SDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWY 263 (710)
T ss_dssp EEECCCCSSC---CSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEE
T ss_pred EEEECCcccc---ccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEE
Confidence 9987653211 1133455678889999999998888889998876666667899999999999988755433578999
Q ss_pred EECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC--CeEEeccCCCCce
Q 003878 331 CDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN--DWFEVIPEAERDV 408 (789)
Q Consensus 331 ~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~--~~~~l~~~~~~~~ 408 (789)
+|+++...+. .....+..+....+.....|++||+.|++.++.++++++|+++|+++++ .|+.++++.+...
T Consensus 264 ~d~~~~~~~~------~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 337 (710)
T 2xdw_A 264 CDLQQESNGI------TGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDV 337 (710)
T ss_dssp EEGGGSSSSS------CSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE
T ss_pred EECccccccc------CCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCe
Confidence 9987610000 0011244555544444556899999999999988889999999998875 4789999876567
Q ss_pred eeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCCc
Q 003878 409 LESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETP 488 (789)
Q Consensus 409 i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~ 488 (789)
+.++.+++++++++.++.++..+|+++++.+|+..+.|+++.+.+..++++++++.++++++|+++|+++|+||+.+++.
T Consensus 338 ~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 417 (710)
T 2xdw_A 338 LEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEEL 417 (710)
T ss_dssp EEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSSC
T ss_pred EEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCcc
Confidence 88899985589999999999999999999768766788888777888889999999999999999999999999998841
Q ss_pred eEEEeeeccCCCCCCCCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCC
Q 003878 489 EMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLG 568 (789)
Q Consensus 489 ~~~~l~~~~~~~~~~~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G 568 (789)
+.++++....++|++..+..+++++++.|| .+|++++++|++...+++.|+||++|||++....+.|+..+..|++++|
T Consensus 418 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~dg-~~i~~~~~~p~~~~~~~~~P~vl~~hGg~~~~~~~~~~~~~~~l~~~~G 496 (710)
T 2xdw_A 418 EPRVFREVTVKGIDASDYQTVQIFYPSKDG-TKIPMFIVHKKGIKLDGSHPAFLYGYGGFNISITPNYSVSRLIFVRHMG 496 (710)
T ss_dssp CCEEEEECCCTTCCGGGEEEEEEEEECTTS-CEEEEEEEEETTCCCSSCSCEEEECCCCTTCCCCCCCCHHHHHHHHHHC
T ss_pred ceEEeeecccCCcCccccEEEEEEEEcCCC-CEEEEEEEecCCCCCCCCccEEEEEcCCCCCcCCCcccHHHHHHHHhCC
Confidence 156777766666888888999999999999 9999999999987667889999999999999888999887666665489
Q ss_pred eEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEe
Q 003878 569 AVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALA 648 (789)
Q Consensus 569 ~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~ 648 (789)
|+|+++|+||+|++|..|+.++...++.+.++|+++++++|++++++|++||+|+|+|+||++++++++++|++|+|+|+
T Consensus 497 ~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~a~~~p~~~~~~v~ 576 (710)
T 2xdw_A 497 GVLAVANIRGGGEYGETWHKGGILANKQNCFDDFQCAAEYLIKEGYTSPKRLTINGGSNGGLLVATCANQRPDLFGCVIA 576 (710)
T ss_dssp CEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEE
T ss_pred cEEEEEccCCCCCCChHHHHhhhhhcCCchHHHHHHHHHHHHHcCCCCcceEEEEEECHHHHHHHHHHHhCccceeEEEE
Confidence 99999999999999999999999899999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCC-----CCCCCCCCCCCCCCeEEEEecCCCCCCCcH
Q 003878 649 HVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVR-----RPWEQNPDKPFQYPSTLLLTADHDDRVVPL 723 (789)
Q Consensus 649 ~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~-----~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~ 723 (789)
.+|++|+..++.++.+..|..+||+|.+++.++.|.++||++++. .+ .+||+||+||++|.+||++
T Consensus 577 ~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~~~~~---------~~pP~Li~~G~~D~~v~~~ 647 (710)
T 2xdw_A 577 QVGVMDMLKFHKYTIGHAWTTDYGCSDSKQHFEWLIKYSPLHNVKLPEADDI---------QYPSMLLLTADHDDRVVPL 647 (710)
T ss_dssp ESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCCCSSTTC---------CCCEEEEEEETTCCSSCTH
T ss_pred cCCcccHhhccccCCChhHHHhCCCCCCHHHHHHHHHhCcHhhhcccccccC---------CCCcEEEEEeCCCCccChh
Confidence 999999999887777777889999998888899999999999998 54 4689999999999999999
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCCCCC
Q 003878 724 HSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGASWVE 789 (789)
Q Consensus 724 ~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 789 (789)
++.+++++|+...++ ..+++.++++++++++||++..+..+..+..+.+++||.++||..|.+
T Consensus 648 ~~~~~~~~l~~~~~~---~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~~ 710 (710)
T 2xdw_A 648 HSLKFIATLQYIVGR---SRKQNNPLLIHVDTKAGHGAGKPTAKVIEEVSDMFAFIARCLNIDWIP 710 (710)
T ss_dssp HHHHHHHHHHHHTTT---STTCCSCEEEEEESSCCSSTTCCHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred HHHHHHHHHHhhhcc---ccCCCcCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCccCC
Confidence 999999999875111 123478999999999999998766556789999999999999998763
No 3
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=100.00 E-value=2.8e-93 Score=852.64 Aligned_cols=674 Identities=36% Similarity=0.668 Sum_probs=590.0
Q ss_pred CCCccccCCceeeeecCccccCCCCcccCCCCHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHhhhcCCCCCCceEeCC
Q 003878 12 QYPVARRDESVVDDYHGVKIVDPYRWLEDPDAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSPRYDAPFKRGN 91 (789)
Q Consensus 12 ~~p~~~~~~~~~~~~~g~~~~D~y~wled~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 91 (789)
.||+|+|+|+ ++++||+++.|||+||||+++|+|++||++||+||+++|++++++++|+++|+++++.++++.|.++|+
T Consensus 2 ~~p~~~~~~~-~~~~~g~~~~d~y~wl~~~~~~~~~~~~~~en~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~~dG~ 80 (695)
T 2bkl_A 2 SYPATRAEQV-VDTLHGVQVADPYRWLEDEKAPEVQTWMTAQNAHAREALAKFPGREALAARFKELFYTDSVSTPSRRNG 80 (695)
T ss_dssp CCSCCCCCCC-EEEETTEEEECTTGGGGCTTSHHHHHHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHSCCEECCCEEETT
T ss_pred CCCCCCCCCe-eeeeCCcEEecCChHhcCCCCHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHhhccccCCCCEEECC
Confidence 6899999995 799999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCcee
Q 003878 92 KYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE 171 (789)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~ 171 (789)
++||+++++++++..||+++..++++++|+|+|++++++.+.+.+++|||||++|||+.+.+|+++.+|+++|++||+.+
T Consensus 81 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~ 160 (695)
T 2bkl_A 81 RFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS 160 (695)
T ss_dssp EEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC
T ss_pred EEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCc
Confidence 99999999988889999998777888999999999999889999999999999999999999999999999999999876
Q ss_pred -cccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEE
Q 003878 172 -ADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFF 250 (789)
Q Consensus 172 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~ 250 (789)
.+.+.++ ++.+++|||||+.|+
T Consensus 161 ~~~~~~~~---------------------------------------------------------~~~~~~wspDg~~l~ 183 (695)
T 2bkl_A 161 KVDVIEGG---------------------------------------------------------KYATPKWTPDSKGFY 183 (695)
T ss_dssp SSCCBSCC---------------------------------------------------------TTCCCEECTTSSEEE
T ss_pred CCcccCcc---------------------------------------------------------cccceEEecCCCEEE
Confidence 4444443 247899999999999
Q ss_pred EEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEE
Q 003878 251 YSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYY 330 (789)
Q Consensus 251 y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~ 330 (789)
|++.+... .+..++..++.+||+|++++++.+++++++.++++.++.++.|||||++|++.+.+.. ..++||+
T Consensus 184 ~~~~d~~~------~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~-~~~~l~~ 256 (695)
T 2bkl_A 184 YEWLPTDP------SIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGW-SENDVYW 256 (695)
T ss_dssp EEECCCCT------TSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETT-TEEEEEE
T ss_pred EEEecCCC------CCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCC-CceEEEE
Confidence 99876531 1233455778899999999998888899988776666778999999999999887652 3678999
Q ss_pred EECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC--CeEEeccCCCCce
Q 003878 331 CDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN--DWFEVIPEAERDV 408 (789)
Q Consensus 331 ~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~--~~~~l~~~~~~~~ 408 (789)
++..+++ +..+....+.....+.++|+ ||+.++.++++++|+++|+++++ .|+.++++.+...
T Consensus 257 ~~~~~~~--------------~~~l~~~~~~~~~~~~~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~ 321 (695)
T 2bkl_A 257 KRPGEKD--------------FRLLVKGVGAKYEVHAWKDR-FYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSAS 321 (695)
T ss_dssp ECTTCSS--------------CEEEEECSSCCEEEEEETTE-EEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCE
T ss_pred EcCCCCc--------------eEEeecCCCceEEEEecCCc-EEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCe
Confidence 9765431 34444433333333458888 99999988789999999998765 3789998876677
Q ss_pred eeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-CeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 409 LESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 409 i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~-~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+.++++++ +++++.++.++..+|++++++ |+..+.+.++ .+.+..++++++++.++++++|+++|+++|++|+.+++
T Consensus 322 l~~~~~~~-~~lv~~~~~dg~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 322 LLSVSIVG-GHLSLEYLKDATSEVRVATLK-GKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEEEEEET-TEEEEEEEETTEEEEEEEETT-CCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred EEEEEEEC-CEEEEEEEECCEEEEEEEeCC-CCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 88999985 899999999999999999986 6555778776 67777788889999999999999999999999999985
Q ss_pred ceEEEeeeccCCCCCCCCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcC
Q 003878 488 PEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHL 567 (789)
Q Consensus 488 ~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~ 567 (789)
.++++..... |++..+..+++++++.|| .+|++++++|++...+++.|+||++|||++....+.|......|++ +
T Consensus 400 --~~~l~~~~~~-~~~~~~~~~~~~~~~~dg-~~i~~~~~~p~~~~~~~~~p~vl~~hGg~~~~~~~~~~~~~~~l~~-~ 474 (695)
T 2bkl_A 400 --SELWAKVDVP-MNPEQYQVEQVFYASKDG-TKVPMFVVHRKDLKRDGNAPTLLYGYGGFNVNMEANFRSSILPWLD-A 474 (695)
T ss_dssp --EEEEEECCCS-SCGGGEEEEEEEEECTTS-CEEEEEEEEETTCCCSSCCCEEEECCCCTTCCCCCCCCGGGHHHHH-T
T ss_pred --EEEEecCCCC-CCHHHCeEEEEEEECCCC-CEEEEEEEECCCCCCCCCccEEEEECCCCccccCCCcCHHHHHHHh-C
Confidence 6777765543 777778899999999999 9999999999987667889999999999999888889877666776 9
Q ss_pred CeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEE
Q 003878 568 GAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCAL 647 (789)
Q Consensus 568 G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v 647 (789)
||+|+++|+||+|++|..|+..+....+.+.++|+++++++|++++++|++||+|+|+|+||++++++++++|++|+|+|
T Consensus 475 G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~~i~i~G~S~GG~la~~~~~~~p~~~~~~v 554 (695)
T 2bkl_A 475 GGVYAVANLRGGGEYGKAWHDAGRLDKKQNVFDDFHAAAEYLVQQKYTQPKRLAIYGGSNGGLLVGAAMTQRPELYGAVV 554 (695)
T ss_dssp TCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEE
T ss_pred CCEEEEEecCCCCCcCHHHHHhhHhhcCCCcHHHHHHHHHHHHHcCCCCcccEEEEEECHHHHHHHHHHHhCCcceEEEE
Confidence 99999999999999999999999888999999999999999999999999999999999999999999999999999999
Q ss_pred ecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHH
Q 003878 648 AHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLK 727 (789)
Q Consensus 648 ~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~ 727 (789)
+.+|++|+..+..+..+..|..+||+|.+++.++.|.++||+++++.+ ..+||+||+||.+|.+||++++.+
T Consensus 555 ~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~--------~~~~P~Li~~G~~D~~v~~~~~~~ 626 (695)
T 2bkl_A 555 CAVPLLDMVRYHLFGSGRTWIPEYGTAEKPEDFKTLHAYSPYHHVRPD--------VRYPALLMMAADHDDRVDPMHARK 626 (695)
T ss_dssp EESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGCCCSS--------CCCCEEEEEEETTCSSSCTHHHHH
T ss_pred EcCCccchhhccccCCCcchHHHhCCCCCHHHHHHHHhcChHhhhhhc--------CCCCCEEEEeeCCCCCCChHHHHH
Confidence 999999999887766677788899999888899999999999999986 357999999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCCC
Q 003878 728 LLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGASW 787 (789)
Q Consensus 728 ~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 787 (789)
++++|++. ...|.++++++++++||++..+..+..+..+.+++||.++|+..+
T Consensus 627 ~~~~l~~~-------~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 679 (695)
T 2bkl_A 627 FVAAVQNS-------PGNPATALLRIEANAGHGGADQVAKAIESSVDLYSFLFQVLDVQG 679 (695)
T ss_dssp HHHHHHTS-------TTCCSCEEEEEETTCBTTBCSCHHHHHHHHHHHHHHHHHHTTC--
T ss_pred HHHHHHhh-------ccCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99999983 222789999999999999876656567889999999999998764
No 4
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=100.00 E-value=2.7e-91 Score=841.23 Aligned_cols=678 Identities=42% Similarity=0.695 Sum_probs=576.6
Q ss_pred CCCCCccccCCceeeeecCccccCCCCcccCC--CCHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHhhhcCCCCCCce
Q 003878 10 SLQYPVARRDESVVDDYHGVKIVDPYRWLEDP--DAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSPRYDAPF 87 (789)
Q Consensus 10 ~~~~p~~~~~~~~~~~~~g~~~~D~y~wled~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (789)
...||+|+|+|+ ++++||+++.|||+||||. ++|+|++||++||++++++|++++.+++|+++|+++++.++++.|.
T Consensus 37 ~~~~p~~~~~~~-~~~~~g~~~~d~y~wl~~~~~~~~~~~~~~~aen~~t~~~l~~~~~~~~l~~~~~~~~~~~~~~~p~ 115 (741)
T 1yr2_A 37 LPPYPASPQVPL-VEDHFGEKVSDPWRWLEADVRTDAKVAAWVQAQSAYTAAYLKQLPERAALEKRMKALIDYERFGLPQ 115 (741)
T ss_dssp -CCCCCCCCCCC-EEEETTEEEECTTGGGGSCTTTCHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHSCCCEECCCE
T ss_pred cCCCCCCCCCCe-eeeeCCcEEccCcHHHhCCCCCCHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHhhcccccCCCE
Confidence 357999999995 7999999999999999998 8999999999999999999999999999999999999999999999
Q ss_pred EeCCEEEEEEEcCCCCeeEEEEecCC---CCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEE
Q 003878 88 KRGNKYFYFHNTGLQPQSVLYVQDSL---DAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMR 164 (789)
Q Consensus 88 ~~g~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~d 164 (789)
++|+++||+++++++++..||+++.. ++++++|+|+|+|++++++.+.+++|||||++|||+.+.+|+++.+|+++|
T Consensus 116 pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~d 195 (741)
T 1yr2_A 116 RRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVG 195 (741)
T ss_dssp EETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEE
T ss_pred EECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEE
Confidence 99999999999999888999999876 678899999999999888889999999999999999999999999999999
Q ss_pred cCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeecccccceEEEEe
Q 003878 165 IEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTH 244 (789)
Q Consensus 165 l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wsp 244 (789)
+++|+.+...+.+. ++.+++|||
T Consensus 196 l~tg~~~~~~~~~~---------------------------------------------------------~~~~~~wsp 218 (741)
T 1yr2_A 196 VADGKPLADELKWV---------------------------------------------------------KFSGLAWLG 218 (741)
T ss_dssp TTTCCEEEEEEEEE---------------------------------------------------------ESCCCEEST
T ss_pred CCCCCCCCccCCCc---------------------------------------------------------eeccEEEEC
Confidence 99998876544443 346899999
Q ss_pred CCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCC
Q 003878 245 DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDP 324 (789)
Q Consensus 245 Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 324 (789)
| +.|+|++.+.+.. .+..++.+++.+||+|++++++.+++++++.++++.++.++.|||||++|++.+.+..+.
T Consensus 219 D-~~l~~~~~~~~~~-----~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~ 292 (741)
T 1yr2_A 219 N-DALLYSRFAEPKE-----GQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDP 292 (741)
T ss_dssp T-SEEEEEECCCC-------------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCS
T ss_pred C-CEEEEEEecCccc-----ccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCC
Confidence 9 9999998765311 022344567889999999999888889998877655667899999999999998765434
Q ss_pred ceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCC-CCeEEeccC
Q 003878 325 VNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP-NDWFEVIPE 403 (789)
Q Consensus 325 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~-~~~~~l~~~ 403 (789)
.++||++|++++. ..++..+....+.....++|+|+.|++.++.++++++|+++|++++ ..|+.++++
T Consensus 293 ~~~l~~~d~~~~~-----------~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~ 361 (741)
T 1yr2_A 293 VNTVHVARVTNGK-----------IGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE 361 (741)
T ss_dssp CCEEEEEEEETTE-----------ECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC
T ss_pred cceEEEEECCCCC-----------CcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC
Confidence 6899999997631 0113445444433444467999999999999888999999999885 358899987
Q ss_pred CCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-CeeEEEeecccCCcEEEEEEcCCCCCcEEEEEE
Q 003878 404 AERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISFTSFLIPGIVYQCN 482 (789)
Q Consensus 404 ~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~-~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~d 482 (789)
.+ ..+.++++++ +++++.++.++..+|++++++ |+..+.++++ .+.+..++++++++.++++++|+++|+++|+||
T Consensus 362 ~~-~~l~~~~~~~-~~lv~~~~~dg~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d 438 (741)
T 1yr2_A 362 SK-DNLESVGIAG-NRLFASYIHDAKSQVLAFDLD-GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALD 438 (741)
T ss_dssp CS-SEEEEEEEEB-TEEEEEEEETTEEEEEEEETT-SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEE
T ss_pred CC-CeEEEEEEEC-CEEEEEEEECCEEEEEEEeCC-CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEE
Confidence 64 4678888886 899999999999999999986 5555778876 677878889999999999999999999999999
Q ss_pred CCCCCceEEEeeeccCCCCCCCCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHH
Q 003878 483 LKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTI 562 (789)
Q Consensus 483 l~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~ 562 (789)
+.++ +.+++++.. ..|++..+..+++++++.|| .+|++++++|++. +++.|+||++|||++....+.|+.....
T Consensus 439 ~~tg--~~~~l~~~~-~~~~~~~~~~~~~~~~~~dg-~~i~~~~~~p~~~--~~~~p~vl~~hGg~~~~~~~~~~~~~~~ 512 (741)
T 1yr2_A 439 PATA--KTTPWEPVH-LTFDPADFRVEQVFYPSKDG-TKVPMFIVRRKDA--KGPLPTLLYGYGGFNVALTPWFSAGFMT 512 (741)
T ss_dssp TTTT--EEEECSCCC-CSSCGGGEEEEEEEEECTTS-CEEEEEEEEETTC--CSCCCEEEECCCCTTCCCCCCCCHHHHH
T ss_pred CCCC--cEEEEecCC-CCCChhHCEEEEEEEEcCCC-CEEEEEEEecCCC--CCCCcEEEEECCCCCccCCCCcCHHHHH
Confidence 9998 467776633 35788788899999999999 9999999999975 5789999999999999888899887766
Q ss_pred HHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCc
Q 003878 563 LMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL 642 (789)
Q Consensus 563 ~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~ 642 (789)
|++ +||+|+++|+||+|++|+.|+..+...++.+.++|+++++++|++++++|++||+|+|+|+||++++++++++|++
T Consensus 513 l~~-~G~~v~~~d~rG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~~~~ri~i~G~S~GG~la~~~~~~~p~~ 591 (741)
T 1yr2_A 513 WID-SGGAFALANLRGGGEYGDAWHDAGRRDKKQNVFDDFIAAGEWLIANGVTPRHGLAIEGGSNGGLLIGAVTNQRPDL 591 (741)
T ss_dssp HHT-TTCEEEEECCTTSSTTHHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSSCTTCEEEEEETHHHHHHHHHHHHCGGG
T ss_pred HHH-CCcEEEEEecCCCCCCCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHEEEEEECHHHHHHHHHHHhCchh
Confidence 665 9999999999999999999999999899999999999999999999999999999999999999999999999999
Q ss_pred eeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCC-CCCCCCCCCCCCCeEEEEecCCCCCCC
Q 003878 643 FGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRR-PWEQNPDKPFQYPSTLLLTADHDDRVV 721 (789)
Q Consensus 643 f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~-~~~~~~~~~~~~pp~Li~~g~~D~~V~ 721 (789)
|+|+|+.+|++|+..+..+..+..|..+||+|.+++.++.+.++||+++++. + .+||+||+||++|.+||
T Consensus 592 ~~~~v~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~sp~~~~~~~~---------~~~P~Li~~G~~D~~v~ 662 (741)
T 1yr2_A 592 FAAASPAVGVMDMLRFDQFTAGRYWVDDYGYPEKEADWRVLRRYSPYHNVRSGV---------DYPAILVTTADTDDRVV 662 (741)
T ss_dssp CSEEEEESCCCCTTSGGGSTTGGGGHHHHCCTTSHHHHHHHHTTCGGGCCCTTS---------CCCEEEEEECSCCSSSC
T ss_pred heEEEecCCccccccccCCCCCchhHHHcCCCCCHHHHHHHHHcCchhhhhccC---------CCCCEEEEeeCCCCCCC
Confidence 9999999999999988776677778889999988888999999999999987 5 46899999999999999
Q ss_pred cHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCCCC
Q 003878 722 PLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGASWV 788 (789)
Q Consensus 722 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 788 (789)
++++.+++++|+.. .+.|.++++++++++||++..+..+..+..+.+++||.++|+..+.
T Consensus 663 ~~~~~~~~~~l~~~-------~~~g~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 722 (741)
T 1yr2_A 663 PGHSFKYTAALQTA-------AIGPKPHLIRIETRAGHGSGKPIDKQIEETADVQAFLAHFTGLTPR 722 (741)
T ss_dssp THHHHHHHHHHHHS-------CCCSSCEEEEEC---------CHHHHHHHHHHHHHHHHHHHTCCCC
T ss_pred hhHHHHHHHHHhhh-------hcCCCCEEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHHHcCCCcc
Confidence 99999999999983 2238999999999999998776665678899999999999987753
No 5
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=100.00 E-value=8.3e-91 Score=835.41 Aligned_cols=676 Identities=25% Similarity=0.408 Sum_probs=566.4
Q ss_pred CCCCCCCCCCCCCCccccCCceeeeecC---------------ccccCCCCcccCCC--CHHHHHHHHHHHHHHHHHHcC
Q 003878 1 MASLSGIDESLQYPVARRDESVVDDYHG---------------VKIVDPYRWLEDPD--AEEVKDFVQKQVELTDSVLKN 63 (789)
Q Consensus 1 ~~~~~~~~~~~~~p~~~~~~~~~~~~~g---------------~~~~D~y~wled~~--~~~~~~~~~~~~~~~~~~~~~ 63 (789)
|+|.+.......||+|+|+|+ +++ || +++.|||+||||++ +|||++||++||+||+++|++
T Consensus 21 ~~~~~~~~~~~~~p~~~~~~~-~~~-~g~~~~~~~~~~~~~~~~~~~d~y~wl~d~~~~~~~~~~~~~~~n~~~~~~~~~ 98 (751)
T 2xe4_A 21 MSSDSSVAASAQPPIAAKKPH-RVT-LGYVEGEDRGPNPMNPPRYREDPYFWMRDDDRKDPAVIEHLNKEKVYFQARSAD 98 (751)
T ss_dssp ---------CCCCCCCCCCCC-EEE-ESCCTTSCCCSSCCSSCEEEECTTGGGCCTTSCCHHHHHHHHHHHHHHHHHHGG
T ss_pred ccccccCCCCCCCCCCCCCCe-eec-CCCcccccccccccCCCeEEeeCCccccCCCCCCHHHHHHHHHHHHHHHHHHhh
Confidence 455544444467999999995 788 99 99999999999999 999999999999999999999
Q ss_pred C-ccHHHHHHHHHhhhcCCCCCCceEeCCEEEEEEEcCCCCeeEEEEecC---CCC--CceEEeccCCCCCCCc-EEEEe
Q 003878 64 C-DVRDKLREKITKLFDSPRYDAPFKRGNKYFYFHNTGLQPQSVLYVQDS---LDA--KAKVLLDPNTLSDDGT-AALIK 136 (789)
Q Consensus 64 ~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~---~~~--~~~~l~d~~~~~~~~~-~~~~~ 136 (789)
+ +++++|++||++++..+++++|.++|+++||.++.+++++.++|+++. .++ ++++|+|+|++++++. +.++.
T Consensus 99 ~~~~~~~l~~e~~~~~~~~~~~~p~~~g~~~yy~~~~~g~~~~vl~r~~~~~~~~~~~~~~vlld~n~~a~~~~~~~~~~ 178 (751)
T 2xe4_A 99 IAQLRDDIYAEHISHINEDDMSAPYVYGKYRYYTREVKGKPYKIYCRVFTDKEPGDVAAEEVIIDVNQVAEGKAFCDVME 178 (751)
T ss_dssp GHHHHHHHHHHHHHTSCSSEECCCEEETTEEEEEEECTTCCSCEEEEEETTSCTTCTTTCEEEEEHHHHTTTCSCCEEEE
T ss_pred hhHHHHHHHHHHHHhcccccCCCCeEECCEEEEEEECCCCceeEEEEEcCCCCCCCCcCCEEEechhHhccCCCeEEEee
Confidence 9 999999999999999999999999999999999999988888888875 444 6799999999998854 58999
Q ss_pred EEeC-CCCcEEEEEEecCCceEEEEEEEEcCCC-ceecccccccccccccCccceeeeeeccccccccccccccccceee
Q 003878 137 VSVS-EDAKYLAYALSYSGSDWATIKLMRIEDQ-IVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFF 214 (789)
Q Consensus 137 ~~~S-pDg~~la~~~~~~g~~~~~i~v~dl~tg-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 214 (789)
++|| |||++|||+.+..|+++++|+++|+++| +.+++.+.+.
T Consensus 179 ~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~------------------------------------ 222 (751)
T 2xe4_A 179 VKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGT------------------------------------ 222 (751)
T ss_dssp EEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEE------------------------------------
T ss_pred eEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCc------------------------------------
Confidence 9999 9999999999999999999999999999 7655444443
Q ss_pred EEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEe
Q 003878 215 FYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWK 294 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~ 294 (789)
..+++|||||++|+|++.+. ..++.+||+|++++++.+++++++
T Consensus 223 ----------------------~~~~~WspDg~~l~y~~~d~--------------~~~~~~v~~~~lgt~~~~~~lv~~ 266 (751)
T 2xe4_A 223 ----------------------NGEIVWGPDHTSLFYVTKDE--------------TLRENKVWRHVMGKLQSEDVCLYE 266 (751)
T ss_dssp ----------------------CSCCEECSSTTEEEEEEECT--------------TCCEEEEEEEETTSCGGGCEEEEE
T ss_pred ----------------------eeeEEEecCCCEEEEEEECC--------------CCCCCEEEEEECCCCchhcEEEEe
Confidence 47899999999999998653 345678999999998888889998
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCcc--Eeeeccc-cceeEEEe-cCC
Q 003878 295 DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPF--VKLIDGF-DAQYEVIA-NDD 370 (789)
Q Consensus 295 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~--~~l~~~~-~~~~~~~s-~dG 370 (789)
+++.. +..++.|||||++|++.+.... .++||++|++++. ..+ +.++.+. ...+. .. ++|
T Consensus 267 ~~~~~-~~~~~~~SpDg~~l~~~~~~~~--~~~l~~~d~~~~~------------~~~~~~~l~~~~~~~~~s-~~~~~g 330 (751)
T 2xe4_A 267 EHNPL-FSAFMYKAADTNTLCIGSQSPE--TAEVHLLDLRKGN------------AHNTLEIVRPREKGVRYD-VQMHGT 330 (751)
T ss_dssp CCCTT-CEEEEEECTTSSEEEEEEECSS--CEEEEEEESSSCT------------TCCCEEESSCCCTTCCEE-EEEETT
T ss_pred cCCCc-eEEEEEECCCCCEEEEEecCCC--CceEEEEECCCCC------------CCceeEEeecCCCCceEE-EeeeeC
Confidence 76543 4568899999999999986543 6899999998741 112 3333322 11222 22 349
Q ss_pred CEEEEEECCC-CCCceEEEEECCCCCCeEE-eccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEEC-------CCCc
Q 003878 371 TVFTFLTNKD-APKYKIIRVDLKEPNDWFE-VIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDL-------KNGS 441 (789)
Q Consensus 371 ~~l~~~tn~~-~~~~~L~~~dl~~~~~~~~-l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl-------~tG~ 441 (789)
+.|||++|++ +++++|++++++++..|+. ++++..+..+.++.+++ +++++.++.++..+|+++++ ++|+
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~~-~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~ 409 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVRS-NYLVVAGRRAGLTRIWTMMADSQDGVFKAGT 409 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEECS-SEEEEEEEETTEEEEEEEECCTTTSCCCTTT
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEEC-CEEEEEEEeCCEEEEEEEecccccccccCCc
Confidence 9999999987 7899999999986434777 88887666788899886 89999999999999999996 5455
Q ss_pred eeeecccC-CeeEEEeec----ccCCcEEEEEEcCCCCCcEEEEEECCCCCceEEEeeeccCC-CCCCCCCcEEEEEEec
Q 003878 442 LLHQLPIE-IGSVNAISA----RREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIP-GFDRSEFHVHQVFVPS 515 (789)
Q Consensus 442 ~~~~l~~~-~~~v~~~s~----s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~~~~~l~~~~~~-~~~~~~~~~~~~~~~s 515 (789)
..+.|+++ .+.+..+++ +++++.++++++|+++|+++|.+|+.+++ .+++++...+ .+++..+.++++++++
T Consensus 410 ~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~s 487 (751)
T 2xe4_A 410 GLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDHS--RTAVKVREVGGGFDAANYKVERRFATA 487 (751)
T ss_dssp CCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTCC--EEEEEECCCCTTCCGGGEEEEEEEEEC
T ss_pred cceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCCc--EEEEeccccccCCCccceEEEEEEEEC
Confidence 13677766 333335543 45888899999999999999999999885 6777766554 5777788899999999
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHh-cccccC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK-GGALAK 594 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~-~~~~~~ 594 (789)
.|| .+|++++++|++..++++.|+||++|||++....+.|+.....|++ +||+|+++|+||+|++|+.|+. ++...+
T Consensus 488 ~dG-~~i~~~l~~p~~~~~~~~~P~vl~~HGg~~~~~~~~~~~~~~~l~~-~G~~v~~~d~RG~g~~G~~~~~~~~~~~~ 565 (751)
T 2xe4_A 488 PDQ-TKIPLSVVYHKDLDMSQPQPCMLYGYGSYGLSMDPQFSIQHLPYCD-RGMIFAIAHIRGGSELGRAWYEIGAKYLT 565 (751)
T ss_dssp TTC-CEEEEEEEEETTSCTTSCCCEEEECCCCTTCCCCCCCCGGGHHHHT-TTCEEEEECCTTSCTTCTHHHHTTSSGGG
T ss_pred CCC-cEEEEEEEcCCCCCCCCCccEEEEECCCCCcCCCCcchHHHHHHHh-CCcEEEEEeeCCCCCcCcchhhccccccc
Confidence 999 9999999999987667889999999999998888888876665655 9999999999999999999999 988888
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCC----ccchhh
Q 003878 595 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG----HAWVSD 670 (789)
Q Consensus 595 ~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~----~~~~~e 670 (789)
+.+.++|+++++++|++++++|++||+|+|+|+||++++++++++|++|+|+|+.+|++|+..++..... ..| .+
T Consensus 566 ~~~~~~D~~~~~~~l~~~~~~d~~ri~i~G~S~GG~la~~~a~~~p~~~~a~v~~~~~~d~~~~~~~~~~~~~~~~~-~~ 644 (751)
T 2xe4_A 566 KRNTFSDFIAAAEFLVNAKLTTPSQLACEGRSAGGLLMGAVLNMRPDLFKVALAGVPFVDVMTTMCDPSIPLTTGEW-EE 644 (751)
T ss_dssp THHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGGGCSEEEEESCCCCHHHHHTCTTSTTHHHHT-TT
T ss_pred cCccHHHHHHHHHHHHHCCCCCcccEEEEEECHHHHHHHHHHHhCchheeEEEEeCCcchHHhhhcccCcccchhhH-HH
Confidence 9999999999999999999999999999999999999999999999999999999999999776421111 123 67
Q ss_pred cCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEE
Q 003878 671 FGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPII 750 (789)
Q Consensus 671 ~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 750 (789)
||+|.+++.++.+.++||+.+++++ .+||+||+||++|.+||++++.+++++|+.. ...+.++.
T Consensus 645 ~g~p~~~~~~~~~~~~sp~~~~~~~---------~~Pp~Lii~G~~D~~vp~~~~~~~~~~L~~~-------~~~~~~~~ 708 (751)
T 2xe4_A 645 WGNPNEYKYYDYMLSYSPMDNVRAQ---------EYPNIMVQCGLHDPRVAYWEPAKWVSKLREC-------KTDNNEIL 708 (751)
T ss_dssp TCCTTSHHHHHHHHHHCTGGGCCSS---------CCCEEEEEEETTCSSSCTHHHHHHHHHHHHH-------CCSCCCEE
T ss_pred cCCCCCHHHHHHHHhcChhhhhccC---------CCCceeEEeeCCCCCCCHHHHHHHHHHHHhc-------CCCCceEE
Confidence 8999888888899999999999986 4678999999999999999999999999987 23356788
Q ss_pred EEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCCCC
Q 003878 751 GRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGASWV 788 (789)
Q Consensus 751 l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~~ 788 (789)
+++++++||++.....+..+..+.+++||.++||..|.
T Consensus 709 ~~~~~~~gH~~~~~~~~~~~~~~~~~~Fl~~~l~~~~~ 746 (751)
T 2xe4_A 709 LNIDMESGHFSAKDRYKFWKESAIQQAFVCKHLKSTVR 746 (751)
T ss_dssp EEEETTCCSSCCSSHHHHHHHHHHHHHHHHHHTTCCSC
T ss_pred EEECCCCCCCCcCChhHHHHHHHHHHHHHHHHhCCCch
Confidence 99999999998876655678889999999999998764
No 6
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=100.00 E-value=1.4e-89 Score=807.44 Aligned_cols=665 Identities=24% Similarity=0.369 Sum_probs=562.0
Q ss_pred eeecCccccCCCCcccCCCCHHHHHHHHHHHHHHHHHHcCCccHHHHHHHHHhhhcCC-CCCCceEeCCEEEEEEEcCCC
Q 003878 24 DDYHGVKIVDPYRWLEDPDAEEVKDFVQKQVELTDSVLKNCDVRDKLREKITKLFDSP-RYDAPFKRGNKYFYFHNTGLQ 102 (789)
Q Consensus 24 ~~~~g~~~~D~y~wled~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~ 102 (789)
+.-||+++.|||+||||.++||+++||++||++|.++|++++.+++|+++|+++++++ +++.|+++|+++||+|+++.+
T Consensus 13 ~~~~~~~~~Dpy~wLEd~~~~~~~~wv~aqN~~T~~~l~~~p~~~~l~~~~~~~~~~~~ri~~p~~~g~~~y~f~~d~~~ 92 (711)
T 4hvt_A 13 DNNKQIFNPKETKFLEEAEGVEALEWAKERTSKTEKALQAMQEYKQIKKEIETIFYDQRKTPYGVIRKGYVYNFWMDDKN 92 (711)
T ss_dssp -------CHHHHGGGGSSSSSHHHHHHHHHHHHHHHHHHTSTTHHHHHHHHHHHHTCTTSCCCCEEETTEEEEEECCSSC
T ss_pred cCCCceeeCCCchhhcCCCCHHHHHHHHHHHHHHHHHHhCCccHHHHHHHHHHHhccccccCCcEEECCEEEEEEecCCC
Confidence 4568999999999999999999999999999999999999999999999999999987 899999999999999999999
Q ss_pred CeeEEEEecCC------CCCceEEeccCCCCCC-Cc-EEEEeEE-eCCCCcEEEEEEecCCceEEEEEEEEcCCCceecc
Q 003878 103 PQSVLYVQDSL------DAKAKVLLDPNTLSDD-GT-AALIKVS-VSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEAD 173 (789)
Q Consensus 103 ~~~~~~~~~~~------~~~~~~l~d~~~~~~~-~~-~~~~~~~-~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~ 173 (789)
+| +||||.++ +++|+||||+|+|+++ |+ +.+.+++ +||||+++||+++.+|+|+.+|+++|++|++.+++
T Consensus 93 ~~-gl~rrt~~~~~~~~~p~wevllD~d~l~~~~g~~~~~~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~ 171 (711)
T 4hvt_A 93 PQ-GLWRRTLVDNYSKDKPNWEVLIDFDKLSKKIGKKVAYRGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKN 171 (711)
T ss_dssp SS-CEEEEEEHHHHTSSSCCCEEEEEHHHHHHHHTSCEEEEEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTT
T ss_pred Cc-EEEEEccchhcccCCCCcEEEeccccccccCCCcEEEeceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCC
Confidence 99 79999654 5779999999999977 65 8999998 99999999999999999999999999999998876
Q ss_pred ccc-ccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEE
Q 003878 174 ALS-WVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYS 252 (789)
Q Consensus 174 ~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~ 252 (789)
.+. +.+ .|| + +| .+++.++|. |++++||.
T Consensus 172 ~~~~~~k---------------------~~~-~----------------------~~-----~~~~~~~W~-d~~~~~~~ 201 (711)
T 4hvt_A 172 GFEPITN---------------------SGK-L----------------------LE-----GKFTYPTWI-NKDTIIFN 201 (711)
T ss_dssp CSCCBCT---------------------TCC-B----------------------CC-----EETCCEEEE-ETTEEEEC
T ss_pred Ccccccc---------------------ccc-c----------------------cc-----cccceeeEE-CCCEEEEE
Confidence 555 210 000 0 00 035677998 77888887
Q ss_pred EccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcE----EEEEEEcCCCCceEE
Q 003878 253 RYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQY----LVMCIEENCDPVNKV 328 (789)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~----l~~~~~~~~~~~~~i 328 (789)
+... .+..+++++++++|+|++||+++++++||++++.+. ..++..++|+++ +++... .+...+++
T Consensus 202 ~~~~--------~~~~~~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~i~~~-~~~~~~~~ 271 (711)
T 4hvt_A 202 LVLH--------KNEITSSLYPNSLYIWKRGESIEKAKKLFEVPKEYI-YVSAGKLLSDTISSSLIFISAN-KDFYNYDN 271 (711)
T ss_dssp CCCS--------TTCBCTTSSBCEEEEEETTSCGGGCEEEEECCTTSC-EEEEEESSCTTTCSSEEEEEEE-SSSSCEEE
T ss_pred eCCC--------CCCcCcCCCCCEEEEEECCCChHHCeEEeccCCCce-EEEEEEecCCCceEEEEEEEEe-cccCceeE
Confidence 5432 245677899999999999999999999999987655 457788999985 455443 23345899
Q ss_pred EEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCC-------CCCceEEEEECCCC-------
Q 003878 329 YYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKD-------APKYKIIRVDLKEP------- 394 (789)
Q Consensus 329 ~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~-------~~~~~L~~~dl~~~------- 394 (789)
|+++++.. ...+.++....+... ... .++++|+.+..+ .++++|++++++++
T Consensus 272 ~~~~~~~~------------~~~~~~l~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 337 (711)
T 4hvt_A 272 YILDTKYK------------NLKLQKINMPSDATL-QGS-FKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDK 337 (711)
T ss_dssp EEEECSSS------------SCEEEECCSCTTCEE-EEE-ETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGC
T ss_pred EEEcCCCC------------CCcceEeecCCcceE-eee-ECCEEEEEECcccccccccCCCCeEEEEECCccccccccc
Confidence 99997641 112344433333222 223 366888876432 47899999998763
Q ss_pred CCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCc-eeee-cccC-CeeEEEeecccCCcEEEEEEcC
Q 003878 395 NDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGS-LLHQ-LPIE-IGSVNAISARREDSVVFISFTS 471 (789)
Q Consensus 395 ~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~-~~~~-l~~~-~~~v~~~s~s~d~~~l~~~~ss 471 (789)
..|++++++..+..++++.+++ +++++.+..++.++|+++++++|+ ..+. +.+| .+.+...+.+++++.++++++|
T Consensus 338 ~~~~~~~~~~~~~~l~~~~~~~-~~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~~~~~~~~~~~~~~~~~~~~~ss 416 (711)
T 4hvt_A 338 TSLKILFTPTANEVFNFISTTK-DRVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPYQNAIFGMSSYEEEEEALITIEN 416 (711)
T ss_dssp TTCEEEECCCTTEEEEEEEECS-SCEEEEEEETTEEEEEEECEETTEECCCEEECCCSTTCEEEEECCTTCSCEEEEEEC
T ss_pred ccceEEECCCCCCeEEEEEEEC-CEEEEEEEECCEEEEEEEECCCCceEEEeccCCCCCeEEEEEeecCcCCEEEEEEec
Confidence 2588877777778999999998 799999999999999999987675 2355 7776 5677777777888999999999
Q ss_pred CCCCcEEEEEECCCCCceEEEeeeccCCCCCCCCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCcc
Q 003878 472 FLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS 551 (789)
Q Consensus 472 ~~~P~~ly~~dl~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~ 551 (789)
+++|+++|++|+. ++ .++++... +.+++..+..+++++++.|| ++|++++++|++..++++.|+||++|||++.+
T Consensus 417 ~~~P~~~~~~d~~-~~--~~~l~~~~-~~~~~~~~~~e~v~~~s~DG-~~i~~~l~~P~~~~~~~~~P~vl~~HGG~~~~ 491 (711)
T 4hvt_A 417 SIVPPTIYLWVKT-HE--LKIIRKAL-YSFDSENYVLEQKEATSFDG-VKIPYFLVYKKGIKFDGKNPTLLEAYGGFQVI 491 (711)
T ss_dssp SSSCCEEEEECTT-SC--EEEEECCS-SCCCGGGEEEEEEEEECTTS-CEEEEEEEEETTCCCSSCCCEEEECCCCTTCC
T ss_pred CCCCCEEEEEeCC-Cc--EEEEecCC-cccCcccCeeEEEEEECCCC-eEEEEEEEecCCCCCCCCccEEEEECCCCCCC
Confidence 9999999999998 63 67777643 45777788899999999999 99999999999876778999999999999999
Q ss_pred CCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHH
Q 003878 552 VTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLL 631 (789)
Q Consensus 552 ~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l 631 (789)
..+.|+..+.+.+.++||+|+++|+||+|++|++|+..+...++.+.++|+++++++|++++++|++||+|+|+|+||++
T Consensus 492 ~~~~~~~~~~q~la~~Gy~Vv~~d~RGsg~~G~~~~~~~~~~~~~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~l 571 (711)
T 4hvt_A 492 NAPYFSRIKNEVWVKNAGVSVLANIRGGGEFGPEWHKSAQGIKRQTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLL 571 (711)
T ss_dssp CCCCCCHHHHHHTGGGTCEEEEECCTTSSTTCHHHHHTTSGGGTHHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHH
T ss_pred CCCcccHHHHHHHHHCCCEEEEEeCCCCCCcchhHHHhhhhccCcCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHH
Confidence 99999987654444599999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEE
Q 003878 632 VGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLL 711 (789)
Q Consensus 632 ~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li 711 (789)
++++++++|++|+|+|+.+|++|+..+..+..+..|..+||+|.+++.++.+.++||+++++++ ..+||+||
T Consensus 572 a~~~a~~~pd~f~a~V~~~pv~D~~~~~~~~~~~~~~~~~G~p~~~~~~~~l~~~SP~~~v~~i--------~~~pPvLi 643 (711)
T 4hvt_A 572 VSVAMTQRPELFGAVACEVPILDMIRYKEFGAGHSWVTEYGDPEIPNDLLHIKKYAPLENLSLT--------QKYPTVLI 643 (711)
T ss_dssp HHHHHHHCGGGCSEEEEESCCCCTTTGGGSTTGGGGHHHHCCTTSHHHHHHHHHHCGGGSCCTT--------SCCCEEEE
T ss_pred HHHHHHhCcCceEEEEEeCCccchhhhhccccchHHHHHhCCCcCHHHHHHHHHcCHHHHHhhc--------CCCCCEEE
Confidence 9999999999999999999999999988777777888999999888889999999999999986 45789999
Q ss_pred EecCCCCCCCcHHHHHHHHHH-HHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCCC
Q 003878 712 LTADHDDRVVPLHSLKLLATM-QYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGASW 787 (789)
Q Consensus 712 ~~g~~D~~V~~~~~~~~~~~L-~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 787 (789)
+||++|++||++++.+++++| ++. |.|+++++++++||++.....+..+..+.+++||.++||..+
T Consensus 644 i~G~~D~~Vp~~~s~~~~~aL~~~~----------g~pv~l~~~p~~gHg~~~~~~~~~~~~~~i~~FL~~~Lg~~i 710 (711)
T 4hvt_A 644 TDSVLDQRVHPWHGRIFEYVLAQNP----------NTKTYFLESKDSGHGSGSDLKESANYFINLYTFFANALKLKI 710 (711)
T ss_dssp EEETTCCSSCTHHHHHHHHHHTTCT----------TCCEEEEEESSCCSSSCSSHHHHHHHHHHHHHHHHHHHTCCC
T ss_pred EecCCCCcCChHHHHHHHHHHHHHc----------CCCEEEEEECCCCCcCcCCcchHHHHHHHHHHHHHHHhCCcc
Confidence 999999999999999999999 987 899999999999999987777778889999999999999875
No 7
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=100.00 E-value=1.2e-50 Score=480.97 Aligned_cols=593 Identities=14% Similarity=0.083 Sum_probs=427.3
Q ss_pred CCCCCceEeCCEEEEEEEc-CCCCeeEEEEecCCCCCceEEeccCC--CCCCCcEEEEeEEe--CCCCcE-EEEEEecCC
Q 003878 81 PRYDAPFKRGNKYFYFHNT-GLQPQSVLYVQDSLDAKAKVLLDPNT--LSDDGTAALIKVSV--SEDAKY-LAYALSYSG 154 (789)
Q Consensus 81 ~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~d~~~--~~~~~~~~~~~~~~--SpDg~~-la~~~~~~g 154 (789)
..+..|...|+++||.... ..+....||++. .+++.+.|+.... .+..+.+.-..+.+ ||||++ |||+.+.
T Consensus 24 ~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~-- 100 (662)
T 3azo_A 24 GRPACVGAVGDEVWWVAPRPAEAGRATLVRRR-ADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFG-- 100 (662)
T ss_dssp SCCEEEEEETTEEEEEEEETTTTTEEEEEEEC-TTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTT--
T ss_pred CccceeEEcCCeEEEEecCcccCCcEEEEEEC-CCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECC--
Confidence 3566677789999998874 234467799873 3455454443321 11100011113333 599999 9987653
Q ss_pred ceEEEEEEEEcC--C-CceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeee
Q 003878 155 SDWATIKLMRIE--D-QIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSV 231 (789)
Q Consensus 155 ~~~~~i~v~dl~--t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~ 231 (789)
..+||++|+. + ++... +.... ......
T Consensus 101 --~~~l~~~~~~~~g~~~~~~--l~~~~-----------------~~~~~~----------------------------- 130 (662)
T 3azo_A 101 --DQRLYAFEPDAPGGAVPRP--LTPVS-----------------AVGGGL----------------------------- 130 (662)
T ss_dssp --TCCEEEECTTSTTCCCCEE--CSCCC-----------------CSTTCE-----------------------------
T ss_pred --CCeEEEEcCCCCCCCCCEe--ccCCc-----------------cCCCCc-----------------------------
Confidence 3479999987 4 54332 22210 000000
Q ss_pred ecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCC----CCcEEEEecCCCCeeEEEEEE
Q 003878 232 VSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ----SEDILCWKDPEHPKYIFSGHV 307 (789)
Q Consensus 232 ~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~----~~~~~~~~~~~~~~~~~~~~~ 307 (789)
...+++|||||+.|+|++.+.... .......+|+++++.+.. .+...+.+ .+......+.|
T Consensus 131 ----~~~~~~~spDg~~l~~~~~~~~~~---------~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~ 195 (662)
T 3azo_A 131 ----RWADPVLLPERGEVWCMAEEFTGE---------GPSDVRRFLAAVPLDGSAAADRSAVRELSD--DAHRFVTGPRL 195 (662)
T ss_dssp ----EEEEEEEETTTTEEEEEEEEECSS---------STTCEEEEEEEEETTSTTTTCGGGSEESSC--SCSSEECCCEE
T ss_pred ----cccCcEECCCCCEEEEEEecccCC---------CCCCceeEEEEEECCCCccccCCceeEEEe--cCCCcccCceE
Confidence 247899999999999997642100 001344679999998721 22333330 12234557899
Q ss_pred ecCCcEEEEEEEcCCC---CceEEEEEECC-CCCCCcccccccCCCCccEeeecc--ccceeEEEecCCCEEEEEECCCC
Q 003878 308 TEDGQYLVMCIEENCD---PVNKVYYCDLS-ALPEGLEGFKKRDGLLPFVKLIDG--FDAQYEVIANDDTVFTFLTNKDA 381 (789)
Q Consensus 308 SpDG~~l~~~~~~~~~---~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~s~dG~~l~~~tn~~~ 381 (789)
||||++|++.+.+... ...+||++|++ ++. ......+..+ .....+.|+|||+ +++.++.+
T Consensus 196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~-----------~~~~~~l~~~~~~~~~~~~~spdg~-l~~~~~~~- 262 (662)
T 3azo_A 196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGR-----------FADTRTLLGGPEEAIAQAEWAPDGS-LIVATDRT- 262 (662)
T ss_dssp CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSC-----------EEEEEEEEEETTBCEEEEEECTTSC-EEEEECTT-
T ss_pred CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCc-----------ccccEEeCCCCCceEcceEECCCCe-EEEEECCC-
Confidence 9999999998865421 13789999998 431 0012334332 2223356999999 88888875
Q ss_pred CCceEEEEECCCCCCeEEeccCCCCce-------eeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEE
Q 003878 382 PKYKIIRVDLKEPNDWFEVIPEAERDV-------LESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVN 454 (789)
Q Consensus 382 ~~~~L~~~dl~~~~~~~~l~~~~~~~~-------i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~ 454 (789)
...+|+++|+++++ ++.+++...... +..+++++++++++.... +..+|+++|+++|+. +.|+.+.+.+.
T Consensus 263 ~~~~l~~~~~~~~~-~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~~-~~l~~~~~~~~ 339 (662)
T 3azo_A 263 GWWNLHRVDPATGA-ATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGEL-VDAAGPWTEWA 339 (662)
T ss_dssp SSCEEEEECTTTCC-EEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTEE-EECCSSCCEEE
T ss_pred CCeEEEEEECCCCc-eeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCcE-EEecCCCCeEE
Confidence 45799999997776 677766432211 456777776788888888 888999999986664 77776666665
Q ss_pred EeecccCCcEEEEEEcCCCCCcEEEEEECCCCCceEEEeeeccCCCCCCCCC-cEEEEEEecCCCceEEEEEEEecCCCC
Q 003878 455 AISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSEF-HVHQVFVPSKDGSTKIPMFIVSKKNIK 533 (789)
Q Consensus 455 ~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~~~~~l~~~~~~~~~~~~~-~~~~~~~~s~dg~~~i~~~l~~p~~~~ 533 (789)
.+. +++++.+++..++...|.++|++|+.+++ .+.++....+.+.+..+ ..+.+.+++.|| .+|+++++.|++..
T Consensus 340 ~~~-s~~~~~~~~~~~~~~~~~~i~~~d~~~g~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~dg-~~i~~~~~~P~~~~ 415 (662)
T 3azo_A 340 ATL-TVSGTRAVGVAASPRTAYEVVELDTVTGR--ARTIGARHTDPVDPAYYPEPQIRTFTAPDG-REIHAHIYPPHSPD 415 (662)
T ss_dssp EEE-EEETTEEEEEEEETTEEEEEEEEETTTCC--EEEEESCCCCSSCGGGSCCCEEEEEECTTS-CEEEEEEECCCCSS
T ss_pred EEE-ecCCCEEEEEEcCCCCCCEEEEEECCCCc--eEEeecCCcccCCccccCcceEEEEEcCCC-CEEEEEEECCCCcc
Confidence 442 56788899999999999999999999885 66666544334554445 368889999999 99999999999754
Q ss_pred ----CCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHH
Q 003878 534 ----LDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYL 609 (789)
Q Consensus 534 ----~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L 609 (789)
++++.|+||++||+++......|.... ..|+++||+|+++|+||++++|+.|.......++...++|+.+++++|
T Consensus 416 ~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~G~~~~~~~~~~~~~~~~~d~~~~~~~l 494 (662)
T 3azo_A 416 FTGPADELPPYVVMAHGGPTSRVPAVLDLDV-AYFTSRGIGVADVNYGGSTGYGRAYRERLRGRWGVVDVEDCAAVATAL 494 (662)
T ss_dssp EECCTTCCCCEEEEECSSSSSCCCCSCCHHH-HHHHTTTCEEEEEECTTCSSSCHHHHHTTTTTTTTHHHHHHHHHHHHH
T ss_pred ccCCCCCCccEEEEECCCCCccCcccchHHH-HHHHhCCCEEEEECCCCCCCccHHHHHhhccccccccHHHHHHHHHHH
Confidence 457889999999999887777787654 455559999999999999999999998876677778899999999999
Q ss_pred HHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc-ccC--Cccch-hhcCCC-CcHHHHHHHH
Q 003878 610 ISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-FTI--GHAWV-SDFGCS-EEEEEFYWLI 684 (789)
Q Consensus 610 ~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~-~~~--~~~~~-~e~g~p-~~~~~~~~l~ 684 (789)
++++++|++||+|+|+|+||+++++++.+ |++|+|+|+.+|+.|+..+.. ... ...+. ..+|.+ ++ .+.+.
T Consensus 495 ~~~~~~~~~~i~l~G~S~GG~~a~~~~~~-~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 570 (662)
T 3azo_A 495 AEEGTADRARLAVRGGSAGGWTAASSLVS-TDVYACGTVLYPVLDLLGWADGGTHDFESRYLDFLIGSFEEF---PERYR 570 (662)
T ss_dssp HHTTSSCTTCEEEEEETHHHHHHHHHHHH-CCCCSEEEEESCCCCHHHHHTTCSCGGGTTHHHHHTCCTTTC---HHHHH
T ss_pred HHcCCcChhhEEEEEECHHHHHHHHHHhC-cCceEEEEecCCccCHHHHhcccccchhhHhHHHHhCCCccc---hhHHH
Confidence 99999999999999999999999999887 999999999999999865432 111 11111 124543 33 34467
Q ss_pred hcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc
Q 003878 685 KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP 764 (789)
Q Consensus 685 ~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~ 764 (789)
+++|+.++.++ .+|+|++||++|.+||++++.+++++|++. |.++++++++++||++...
T Consensus 571 ~~sp~~~~~~~----------~~P~lii~G~~D~~vp~~~~~~~~~~l~~~----------g~~~~~~~~~~~gH~~~~~ 630 (662)
T 3azo_A 571 DRAPLTRADRV----------RVPFLLLQGLEDPVCPPEQCDRFLEAVAGC----------GVPHAYLSFEGEGHGFRRK 630 (662)
T ss_dssp HTCGGGGGGGC----------CSCEEEEEETTCSSSCTHHHHHHHHHHTTS----------CCCEEEEEETTCCSSCCSH
T ss_pred hhChHhHhccC----------CCCEEEEeeCCCCCCCHHHHHHHHHHHHHc----------CCCEEEEEECCCCCCCCCh
Confidence 88999998886 689999999999999999999999999987 8999999999999998654
Q ss_pred hhhHHHHHHHHHHHHHHHhCCCC
Q 003878 765 TQKMIDEAADRYGFMAKMLGASW 787 (789)
Q Consensus 765 ~~~~~~~~~~~~~fl~~~l~~~~ 787 (789)
.. ..+..+.+++||.++|+...
T Consensus 631 ~~-~~~~~~~~~~fl~~~l~~~~ 652 (662)
T 3azo_A 631 ET-MVRALEAELSLYAQVFGVEV 652 (662)
T ss_dssp HH-HHHHHHHHHHHHHHHTTCCC
T ss_pred HH-HHHHHHHHHHHHHHHhCCCC
Confidence 44 46788999999999998764
No 8
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=100.00 E-value=1.9e-48 Score=468.43 Aligned_cols=610 Identities=12% Similarity=0.137 Sum_probs=423.1
Q ss_pred EEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecC----CceEEEEEEEEcCCCceeccccccccccc
Q 003878 107 LYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYS----GSDWATIKLMRIEDQIVEADALSWVCFCF 182 (789)
Q Consensus 107 ~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~----g~~~~~i~v~dl~tg~~~~~~~~~~~~~~ 182 (789)
|++.+..+++.++++....+..- .....++++||||++|||+.+.. -+...++++||+++|+... +...
T Consensus 38 i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~--l~~~---- 110 (740)
T 4a5s_A 38 ILVFNAEYGNSSVFLENSTFDEF-GHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT--EERI---- 110 (740)
T ss_dssp EEEEETTTCCEEEEECTTTTTTC-CSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC--SSCC----
T ss_pred EEEEECCCCceEEEEechhhhhh-cccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE--cccC----
Confidence 66656556776777776654311 11123478999999999987631 1234789999999997654 2221
Q ss_pred ccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeec------ccc--------------------
Q 003878 183 SHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVS------QFK-------------------- 236 (789)
Q Consensus 183 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~------~~~-------------------- 236 (789)
. ....++.++|+|+ +++|.+|. +||.++. ++.
T Consensus 111 ---~----~~~~~~~~SPdG~-----------~la~~~~~----~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee 168 (740)
T 4a5s_A 111 ---P----NNTQWVTWSPVGH-----------KLAYVWNN----DIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEE 168 (740)
T ss_dssp ---C----TTEEEEEECSSTT-----------CEEEEETT----EEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHH
T ss_pred ---C----CcceeeEECCCCC-----------EEEEEECC----eEEEEECCCCceEEEcCCCCccceecCcccccccch
Confidence 0 1245688899998 55555442 3333322 111
Q ss_pred ----cceEEEEeCCcEEEEEEccCCCCC-CCC---CCC--c---------cc--cCCcccEEEEEECCC---CCCCcEEE
Q 003878 237 ----FSSIAWTHDSKGFFYSRYPAPKEG-KDM---DAG--T---------ET--DSNLYHEFYYHFLGT---KQSEDILC 292 (789)
Q Consensus 237 ----~~~~~wspDg~~i~y~~~~~~~~~-~~~---~~~--~---------~~--~~~~~~~i~~~~lg~---~~~~~~~~ 292 (789)
..+++|||||+.|+|.+.+..... ..+ ... . .. ..+...+|+++++.+ +.......
T Consensus 169 ~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~ 248 (740)
T 4a5s_A 169 VFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQ 248 (740)
T ss_dssp TSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEE
T ss_pred hcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEE
Confidence 124889999999999987654211 000 000 0 00 011123688899877 52111122
Q ss_pred EecC----CCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEee----ecccc----
Q 003878 293 WKDP----EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL----IDGFD---- 360 (789)
Q Consensus 293 ~~~~----~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l----~~~~~---- 360 (789)
...+ .+..++..++|||||+.+++...+. .....|+++|++++..... ......+ ...+.
T Consensus 249 l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~-~~~~~i~~~d~~tg~~~~~-------~~~~~~l~~~~~~~~v~~~~ 320 (740)
T 4a5s_A 249 ITAPASMLIGDHYLCDVTWATQERISLQWLRRI-QNYSVMDICDYDESSGRWN-------CLVARQHIEMSTTGWVGRFR 320 (740)
T ss_dssp ECCCHHHHTSCEEEEEEEEEETTEEEEEEEESS-TTEEEEEEEEEETTTTEEE-------ECGGGCEEEECSSSCSSSSS
T ss_pred ecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCC-CCEEEEEEEECCCCccccc-------eeEEEEeeeccCCceEccCc
Confidence 2221 1456778899999999887776543 3356899999988630000 0001111 11111
Q ss_pred ceeEEEecCCCEEE-EEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEe----CCeEEEEEE
Q 003878 361 AQYEVIANDDTVFT-FLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLS----DVKYVLQIR 435 (789)
Q Consensus 361 ~~~~~~s~dG~~l~-~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~----~g~~~L~~~ 435 (789)
...+.|+|||+.|+ +.++++ +..+|+++++++++ .+.|+... .....-+.+. ++.+++.... .+..+|+.+
T Consensus 321 ~~~p~fspDG~~l~~~~s~~~-G~~~l~~~~~~~~~-~~~lT~g~-~~v~~~~~~d-~~~i~f~~~~~~~~~~~~~ly~v 396 (740)
T 4a5s_A 321 PSEPHFTLDGNSFYKIISNEE-GYRHICYFQIDKKD-CTFITKGT-WEVIGIEALT-SDYLYYISNEYKGMPGGRNLYKI 396 (740)
T ss_dssp CCCCEECTTSSEEEEEEECTT-SCEEEEEEETTCSS-CEESCCSS-SCEEEEEEEC-SSEEEEEESCGGGCTTCBEEEEE
T ss_pred CCCceEcCCCCEEEEEEEcCC-CceEEEEEECCCCc-eEecccCC-EEEEEEEEEe-CCEEEEEEecCCCCCceeEEEEE
Confidence 12456999999988 666664 56899999998876 55665443 3333333454 4788888776 345699999
Q ss_pred ECCCCceeeecccC----CeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCCceEEEeeecc-C-CCCCCCCCc-E
Q 003878 436 DLKNGSLLHQLPIE----IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETI-I-PGFDRSEFH-V 508 (789)
Q Consensus 436 dl~tG~~~~~l~~~----~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~~~~~l~~~~-~-~~~~~~~~~-~ 508 (789)
++++++..+.|+.. .+.+..++++++++.+++.++++. |+.+++++..+++ ...++.... . +.+....+. .
T Consensus 397 ~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~~~~~~~s~~~-~p~~~l~~~~~~~-~~~~l~~n~~~~~~~~~~~~~~~ 474 (740)
T 4a5s_A 397 QLIDYTKVTCLSCELNPERCQYYSVSFSKEAKYYQLRCSGPG-LPLYTLHSSVNDK-GLRVLEDNSALDKMLQNVQMPSK 474 (740)
T ss_dssp ETTEEEEEEESSTTTSTTTBCBEEEEECTTSSEEEEEECSBS-SCEEEEEETTTTE-EEEEEECCHHHHHHHTTEECCEE
T ss_pred ECCCCCcceeeccccCCCCCceEEEEECCCCCEEEEEeCCCC-CCEEEEEECCCCc-EEEEeccChhhhhhhhhccCCcc
Confidence 99855443356532 245667889999999999999987 8899999998774 233433211 0 112222333 4
Q ss_pred EEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccC-CCCCCHHHHH-HHHcCCeEEEEEeecCCCCCChhH
Q 003878 509 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSVSRTI-LMRHLGAVFCIANIRGGGEYGEEW 586 (789)
Q Consensus 509 ~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~~~~~-~l~~~G~~v~~~~~RG~g~~g~~~ 586 (789)
+.+.+ +.|| .+|+++++.|++..+.++.|+||++|||++... ...|...+.. +++++||+|+++|+||+|++|..|
T Consensus 475 ~~~~~-~~dg-~~l~~~~~~P~~~~~~~~~P~vv~~HGg~~~~~~~~~~~~~~~~~l~~~~G~~Vv~~D~rG~g~~g~~~ 552 (740)
T 4a5s_A 475 KLDFI-ILNE-TKFWYQMILPPHFDKSKKYPLLLDVYAGPCSQKADTVFRLNWATYLASTENIIVASFDGRGSGYQGDKI 552 (740)
T ss_dssp EEEEE-EETT-EEEEEEEEECTTCCTTSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEEEECCTTCSSSCHHH
T ss_pred EEEEE-ccCC-eEEEEEEEeCCCCCCCCCccEEEEECCCCcccccccccCcCHHHHHHhcCCeEEEEEcCCCCCcCChhH
Confidence 55666 7799 999999999998777789999999999987743 3344423333 443599999999999999999999
Q ss_pred HhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCcc
Q 003878 587 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHA 666 (789)
Q Consensus 587 ~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~ 666 (789)
........+...++|+.+++++|++++++|++||+|+|+|+||+++++++.++|++|+|+|+.+|+.|+..+.. .
T Consensus 553 ~~~~~~~~~~~~~~D~~~~i~~l~~~~~~d~~ri~i~G~S~GG~~a~~~a~~~p~~~~~~v~~~p~~~~~~~~~-----~ 627 (740)
T 4a5s_A 553 MHAINRRLGTFEVEDQIEAARQFSKMGFVDNKRIAIWGWSYGGYVTSMVLGSGSGVFKCGIAVAPVSRWEYYDS-----V 627 (740)
T ss_dssp HGGGTTCTTSHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHTTTCSCCSEEEEESCCCCGGGSBH-----H
T ss_pred HHHHHhhhCcccHHHHHHHHHHHHhcCCcCCccEEEEEECHHHHHHHHHHHhCCCceeEEEEcCCccchHHhhh-----H
Confidence 99888888888899999999999999999999999999999999999999999999999999999999865532 2
Q ss_pred chhh-cCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCC
Q 003878 667 WVSD-FGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQ 745 (789)
Q Consensus 667 ~~~e-~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~ 745 (789)
|... .|.|...+..+.+...+|..+++++ ..+|+|++||++|.+||+.++.+++++|+++
T Consensus 628 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~i---------~~~P~Lii~G~~D~~v~~~~~~~l~~~l~~~---------- 688 (740)
T 4a5s_A 628 YTERYMGLPTPEDNLDHYRNSTVMSRAENF---------KQVEYLLIHGTADDNVHFQQSAQISKALVDV---------- 688 (740)
T ss_dssp HHHHHHCCSSTTTTHHHHHHSCSGGGGGGG---------GGSEEEEEEETTCSSSCTHHHHHHHHHHHHT----------
T ss_pred HHHHHcCCCCccccHHHHHhCCHHHHHhcC---------CCCcEEEEEcCCCCccCHHHHHHHHHHHHHC----------
Confidence 2233 3655222333456788999988886 2359999999999999999999999999998
Q ss_pred CCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCC
Q 003878 746 TNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 746 ~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
+.++++.+++++||++..... ..+....+.+||.++|+..
T Consensus 689 g~~~~~~~~~~~~H~~~~~~~-~~~~~~~i~~fl~~~l~~~ 728 (740)
T 4a5s_A 689 GVDFQAMWYTDEDHGIASSTA-HQHIYTHMSHFIKQCFSLP 728 (740)
T ss_dssp TCCCEEEEETTCCTTCCSHHH-HHHHHHHHHHHHHHHTTCC
T ss_pred CCCeEEEEECCCCCcCCCCcc-HHHHHHHHHHHHHHHcCCC
Confidence 889999999999999865444 3678889999999999764
No 9
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=100.00 E-value=2.6e-46 Score=449.50 Aligned_cols=607 Identities=15% Similarity=0.154 Sum_probs=427.3
Q ss_pred eEeCCEEEEEEE-cCCCCeeEEEEecCCCCCceEEeccCCCCC-------C-----------CcEEEEeEEeCCCCcEEE
Q 003878 87 FKRGNKYFYFHN-TGLQPQSVLYVQDSLDAKAKVLLDPNTLSD-------D-----------GTAALIKVSVSEDAKYLA 147 (789)
Q Consensus 87 ~~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~-------~-----------~~~~~~~~~~SpDg~~la 147 (789)
.++|.+++|... +++.....||+.+..+++.+.+++...... + +...+..++|||||++|+
T Consensus 45 SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~SpDg~~l~ 124 (741)
T 2ecf_A 45 APDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQWSPDAQRLL 124 (741)
T ss_dssp CTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCEECTTSSEEE
T ss_pred ecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeEECCCCCEEE
Confidence 458889999887 554455678888876777777776543321 0 002356789999999999
Q ss_pred EEEecCCceEEEEEEEEcCCC---ceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeecccc
Q 003878 148 YALSYSGSDWATIKLMRIEDQ---IVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKST 224 (789)
Q Consensus 148 ~~~~~~g~~~~~i~v~dl~tg---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g 224 (789)
++.. .+|++||+.++ +... +... . .-..++.+.|+++ +++|.++.
T Consensus 125 ~~~~------~~i~~~d~~~~~~~~~~~--l~~~-------~----~~~~~~~~SPDG~-----------~la~~~~~-- 172 (741)
T 2ecf_A 125 FPLG------GELYLYDLKQEGKAAVRQ--LTHG-------E----GFATDAKLSPKGG-----------FVSFIRGR-- 172 (741)
T ss_dssp EEET------TEEEEEESSSCSTTSCCB--CCCS-------S----SCEEEEEECTTSS-----------EEEEEETT--
T ss_pred EEeC------CcEEEEECCCCCcceEEE--cccC-------C----cccccccCCCCCC-----------EEEEEeCC--
Confidence 9875 48999999998 4432 2111 0 1134566789997 56666643
Q ss_pred ceeeeeeec------ccc----------------------cceEEEEeCCcEEEEEEccCCCCCCCCC------C-----
Q 003878 225 IYSFWSVVS------QFK----------------------FSSIAWTHDSKGFFYSRYPAPKEGKDMD------A----- 265 (789)
Q Consensus 225 ~~~l~~~~~------~~~----------------------~~~~~wspDg~~i~y~~~~~~~~~~~~~------~----- 265 (789)
+||.++. ++. ..+++|||||+.|+|...+...... +. .
T Consensus 173 --~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~-~~~~~~~p~~~~~~ 249 (741)
T 2ecf_A 173 --NLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPV-QKRYEVYADRTDVI 249 (741)
T ss_dssp --EEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCE-EEEEEECSSCEEEE
T ss_pred --cEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCce-EecCCCCCCcccce
Confidence 3444433 110 2569999999999998765421100 00 0
Q ss_pred ----CccccCCcccEEEEEECCC-CCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCc
Q 003878 266 ----GTETDSNLYHEFYYHFLGT-KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGL 340 (789)
Q Consensus 266 ----~~~~~~~~~~~i~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~ 340 (789)
....+.....+|+++++.+ +.. ..+.....+...+..+.| |||++|++...++.....+|+++|++++.
T Consensus 250 ~~~~~~~g~~~~~~~l~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~--- 323 (741)
T 2ecf_A 250 EQRYPAAGDANVQVKLGVISPAEQAQT--QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQ--- 323 (741)
T ss_dssp EEECCBTTSCCCEEEEEEECSSTTCCC--EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCC---
T ss_pred EeecCCCCCCCCeeEEEEEECCCCCce--EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCc---
Confidence 0000011223688888876 432 222222123456778999 99999999887555556889999998853
Q ss_pred ccccccCCCCccEeeecccc------ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeE-E
Q 003878 341 EGFKKRDGLLPFVKLIDGFD------AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESA-T 413 (789)
Q Consensus 341 ~~~~~~~~~~~~~~l~~~~~------~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v-~ 413 (789)
...+..... .....|+|||+ +++.++.+ +..+|+.+++++. .+.+..+. ..+..+ .
T Consensus 324 -----------~~~~~~~~~~~~~~~~~~~~~spdg~-~~~~~~~~-g~~~l~~~~~~~~--~~~l~~~~--~~v~~~~~ 386 (741)
T 2ecf_A 324 -----------QRVLAHETSPTWVPLHNSLRFLDDGS-ILWSSERT-GFQHLYRIDSKGK--AAALTHGN--WSVDELLA 386 (741)
T ss_dssp -----------EEEEEEEECSSCCCCCSCCEECTTSC-EEEEECTT-SSCEEEEECSSSC--EEESCCSS--SCEEEEEE
T ss_pred -----------eEEEEEcCCCCcCCcCCceEECCCCe-EEEEecCC-CccEEEEEcCCCC--eeeeeecc--eEEEeEeE
Confidence 112221110 12345999999 66666654 4578999997654 56665543 334455 4
Q ss_pred EecCC-EEEEEEEeCC--eEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCCceE
Q 003878 414 AVNLN-QMIVSYLSDV--KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEM 490 (789)
Q Consensus 414 ~~~~~-~lv~~~~~~g--~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~~~ 490 (789)
+++++ .+++....++ ..+||.++++ |+..+.|+. ...+..+++++|++.+++.+++...|+.+|+++..++ ..
T Consensus 387 ~s~dg~~l~~~~~~~~~~~~~l~~~~~~-g~~~~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~~~l~~~~~~--~~ 462 (741)
T 2ecf_A 387 VDEKAGLAYFRAGIESARESQIYAVPLQ-GGQPQRLSK-APGMHSASFARNASVYVDSWSNNSTPPQIELFRANGE--KI 462 (741)
T ss_dssp EETTTTEEEEEECSSCTTCBEEEEEETT-CCCCEECCC-SCSEEEEEECTTSSEEEEEEEETTEEEEEEEEETTSC--EE
T ss_pred EeCCCCEEEEEEeCCCCceEEEEEEEcC-CCCeeeccc-CCCceEEEECCCCCEEEEEecCCCCCCeEEEEEcCCC--eE
Confidence 77754 5777776665 4567777775 554466665 3345578899999999999999999999999998665 34
Q ss_pred EEeeeccC---C-CCCCC--CC-cEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC-CCCCH----
Q 003878 491 KIFRETII---P-GFDRS--EF-HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSV---- 558 (789)
Q Consensus 491 ~~l~~~~~---~-~~~~~--~~-~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~---- 558 (789)
+.+..... . .+.+. .+ ..+.+.+++.||..+|+++++.|++..+.++.|+||++||+++.... ..|..
T Consensus 463 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~P~~~~~~~~~p~vv~~hG~~~~~~~~~~~~~~~~~ 542 (741)
T 2ecf_A 463 ATLVENDLADPKHPYARYREAQRPVEFGTLTAADGKTPLNYSVIKPAGFDPAKRYPVAVYVYGGPASQTVTDSWPGRGDH 542 (741)
T ss_dssp ECSSCCCSSSTTSTTHHHHTTCCCEEEEEEECTTSSCEEEEEEECCSSCCTTSCEEEEEECCCSTTCCSCSSCCCCSHHH
T ss_pred EEeccCcccccccchhhhhccCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCcCEEEEEcCCCCcccccccccccchh
Confidence 44443211 0 12211 34 57889999887735899999999876556778999999999876532 33431
Q ss_pred HHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHh
Q 003878 559 SRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ 638 (789)
Q Consensus 559 ~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~ 638 (789)
.....|+++||+|+++|+||.|++|..|........+...++|+.+++++|.+++.+|++||+++|+|+||++++.++.+
T Consensus 543 ~~~~~l~~~G~~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~ 622 (741)
T 2ecf_A 543 LFNQYLAQQGYVVFSLDNRGTPRRGRDFGGALYGKQGTVEVADQLRGVAWLKQQPWVDPARIGVQGWSNGGYMTLMLLAK 622 (741)
T ss_dssp HHHHHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEEEecCCCCCCChhhhHHHhhhcccccHHHHHHHHHHHHhcCCCChhhEEEEEEChHHHHHHHHHHh
Confidence 24456656999999999999999999998877667777789999999999999988999999999999999999999999
Q ss_pred CCCceeEEEecCCcccccccccccCCccchhh-cCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCC
Q 003878 639 RPDLFGCALAHVGVMDMLRYHKFTIGHAWVSD-FGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHD 717 (789)
Q Consensus 639 ~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e-~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D 717 (789)
+|++|+++|+.+|+.++..+.. .|... .+.|... .+.+...+|+.++.++ .+|+|++||++|
T Consensus 623 ~p~~~~~~v~~~~~~~~~~~~~-----~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i----------~~P~lii~G~~D 685 (741)
T 2ecf_A 623 ASDSYACGVAGAPVTDWGLYDS-----HYTERYMDLPARN--DAGYREARVLTHIEGL----------RSPLLLIHGMAD 685 (741)
T ss_dssp CTTTCSEEEEESCCCCGGGSBH-----HHHHHHHCCTGGG--HHHHHHHCSGGGGGGC----------CSCEEEEEETTC
T ss_pred CCCceEEEEEcCCCcchhhhcc-----ccchhhcCCcccC--hhhhhhcCHHHHHhhC----------CCCEEEEccCCC
Confidence 9999999999999998754321 12222 3555321 2335678999888876 689999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 718 DRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 718 ~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
.+||+.++.+++++|+.. +.++++.+++++||++..... .+....+.+||.++|+
T Consensus 686 ~~v~~~~~~~~~~~l~~~----------~~~~~~~~~~~~~H~~~~~~~--~~~~~~i~~fl~~~l~ 740 (741)
T 2ecf_A 686 DNVLFTNSTSLMSALQKR----------GQPFELMTYPGAKHGLSGADA--LHRYRVAEAFLGRCLK 740 (741)
T ss_dssp SSSCTHHHHHHHHHHHHT----------TCCCEEEEETTCCSSCCHHHH--HHHHHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHHHHC----------CCceEEEEECCCCCCCCCCch--hHHHHHHHHHHHHhcC
Confidence 999999999999999987 889999999999999864333 5677889999999986
No 10
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=100.00 E-value=2.3e-45 Score=438.85 Aligned_cols=606 Identities=15% Similarity=0.106 Sum_probs=414.7
Q ss_pred CCCCceEeCCEEEEEEEcCCCCeeEEEEecCCCCCc--eEEeccCCC----CCC-Cc-----EEEEeEEeCCCCcEEEEE
Q 003878 82 RYDAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKA--KVLLDPNTL----SDD-GT-----AALIKVSVSEDAKYLAYA 149 (789)
Q Consensus 82 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~d~~~~----~~~-~~-----~~~~~~~~SpDg~~la~~ 149 (789)
+...+.+.|+.|+|...++ | +.+..+++. ++|++.+.+ +.. +. ..+..+++||| ++++|+
T Consensus 27 ~~~~~~w~g~~~~~~~~~~------i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~ 98 (706)
T 2z3z_A 27 YVVGLQWMGDNYVFIEGDD------L-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF 98 (706)
T ss_dssp -CTTCEEETTEEEEEETTE------E-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE
T ss_pred cCCCCcCcCCeEEEEeCCc------E-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE
Confidence 3444555588877754321 4 555556777 888888754 111 11 34778999999 889988
Q ss_pred EecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeee
Q 003878 150 LSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFW 229 (789)
Q Consensus 150 ~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~ 229 (789)
.+ .+|++||+.+++......... -..++.+.|+++.+.+.+. +...+|
T Consensus 99 ~~------~~i~~~d~~~~~~~~l~~~~~-------------~~~~~~~SpdG~~la~~~~-------------~~i~v~ 146 (706)
T 2z3z_A 99 TQ------GGLVGFDMLARKVTYLFDTNE-------------ETASLDFSPVGDRVAYVRN-------------HNLYIA 146 (706)
T ss_dssp ET------TEEEEEETTTTEEEEEECCTT-------------CCTTCEECTTSSEEEEEET-------------TEEEEE
T ss_pred EC------CEEEEEECCCCceEEccCCcc-------------cccCCcCCCCCCEEEEEEC-------------CeEEEE
Confidence 54 489999999986543211110 1234667799974333322 223333
Q ss_pred eee------c--------ccc---------------cceEEEEeCCcEEEEEEccCCCCCC----CCCCC----------
Q 003878 230 SVV------S--------QFK---------------FSSIAWTHDSKGFFYSRYPAPKEGK----DMDAG---------- 266 (789)
Q Consensus 230 ~~~------~--------~~~---------------~~~~~wspDg~~i~y~~~~~~~~~~----~~~~~---------- 266 (789)
.+. . ... ..+++|||||+.|++.+.+...... +....
T Consensus 147 ~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~ 226 (706)
T 2z3z_A 147 RGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYP 226 (706)
T ss_dssp ECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCC
T ss_pred ecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCC
Confidence 321 1 001 2578999999999999854321100 00000
Q ss_pred ccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCccccccc
Q 003878 267 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 346 (789)
Q Consensus 267 ~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~ 346 (789)
.........+|+++++.++.. ..+.....+...+..+.|||||++|++...++......|+++|++++.
T Consensus 227 ~~g~~~~~~~l~~~d~~~~~~--~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~--------- 295 (706)
T 2z3z_A 227 MAGTPSHHVTVGIYHLATGKT--VYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGR--------- 295 (706)
T ss_dssp BTTSCCCEEEEEEEETTTTEE--EECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCC---------
T ss_pred CCCCCCCeeEEEEEECCCCce--EeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCc---------
Confidence 000012345799999876532 222222223455678999999999999876655456789999998751
Q ss_pred CCCCccEeeeccccc------eeEEEec--CCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeee-EEEecC
Q 003878 347 DGLLPFVKLIDGFDA------QYEVIAN--DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLES-ATAVNL 417 (789)
Q Consensus 347 ~~~~~~~~l~~~~~~------~~~~~s~--dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~-v~~~~~ 417 (789)
....+...... ....|+| ||+ +++.++.+ ...+|+.++++++. .+.+..+. ..+.. +.++++
T Consensus 296 ----~~~~~~~~~~~~~~~~~~~~~~sp~~dg~-~l~~~~~~-g~~~l~~~~~~~~~-~~~l~~~~--~~v~~~~~~spd 366 (706)
T 2z3z_A 296 ----FVRTLFVETDKHYVEPLHPLTFLPGSNNQ-FIWQSRRD-GWNHLYLYDTTGRL-IRQVTKGE--WEVTNFAGFDPK 366 (706)
T ss_dssp ----EEEEEEEEECSSCCCCCSCCEECTTCSSE-EEEEECTT-SSCEEEEEETTSCE-EEECCCSS--SCEEEEEEECTT
T ss_pred ----eeeEEEEccCCCeECccCCceeecCCCCE-EEEEEccC-CccEEEEEECCCCE-EEecCCCC--eEEEeeeEEcCC
Confidence 01122211010 1235899 987 44556554 46789999976553 55555443 23444 678875
Q ss_pred C-EEEEEEEeCC--eEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCCceEEEee
Q 003878 418 N-QMIVSYLSDV--KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFR 494 (789)
Q Consensus 418 ~-~lv~~~~~~g--~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~~~~~l~ 494 (789)
+ .+++....++ ..+|+.+++++|+. +.++. ...+..+++++|++.+++..++...|+.++++|+.+++ .+.+.
T Consensus 367 g~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~-~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~--~~~~~ 442 (706)
T 2z3z_A 367 GTRLYFESTEASPLERHFYCIDIKGGKT-KDLTP-ESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS--HTLLE 442 (706)
T ss_dssp SSEEEEEESSSCTTCBEEEEEETTCCCC-EESCC-SSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE--EEEEE
T ss_pred CCEEEEEecCCCCceEEEEEEEcCCCCc-eeccC-CCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe--Eeecc
Confidence 4 5666665554 35899999987764 56653 33466789999999999999999999999999998883 44444
Q ss_pred eccCCCCCCCCC-cEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC-CCCCHH---HHHHHHcCCe
Q 003878 495 ETIIPGFDRSEF-HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVS---RTILMRHLGA 569 (789)
Q Consensus 495 ~~~~~~~~~~~~-~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~---~~~~l~~~G~ 569 (789)
... .+....+ ..+.+.+++.||..+|+++++.|++..++++.|+||++|||++.... ..|... +...|+++||
T Consensus 443 ~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~P~~~~~~~~~p~iv~~HGg~~~~~~~~~~~~~~~~~~~~la~~G~ 520 (706)
T 2z3z_A 443 AKN--PDTGYAMPEIRTGTIMAADGQTPLYYKLTMPLHFDPAKKYPVIVYVYGGPHAQLVTKTWRSSVGGWDIYMAQKGY 520 (706)
T ss_dssp CC--------CCCCEEEEEEECTTSSSEEEEEEECCTTCCTTSCEEEEEECCCCTTCCCCCSCC----CCHHHHHHHTTC
T ss_pred ccc--hhhhcCCCCcEEEEEEcCCCCEEEEEEEEeCCCCCCCCCccEEEEecCCCCceeeccccccCchHHHHHHHhCCc
Confidence 321 1322223 46778888887635899999999987666789999999999876542 345543 4566666999
Q ss_pred EEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEec
Q 003878 570 VFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 649 (789)
Q Consensus 570 ~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~ 649 (789)
+|+++|+||.|++|..|........+...++|+.+++++|.+++.+|++|++|+|+|+||++++.++.++|++|+++|+.
T Consensus 521 ~v~~~d~rG~g~s~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 600 (706)
T 2z3z_A 521 AVFTVDSRGSANRGAAFEQVIHRRLGQTEMADQMCGVDFLKSQSWVDADRIGVHGWSYGGFMTTNLMLTHGDVFKVGVAG 600 (706)
T ss_dssp EEEEECCTTCSSSCHHHHHTTTTCTTHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTTTEEEEEEE
T ss_pred EEEEEecCCCcccchhHHHHHhhccCCccHHHHHHHHHHHHhCCCCCchheEEEEEChHHHHHHHHHHhCCCcEEEEEEc
Confidence 99999999999999999887777777788999999999999998899999999999999999999999999999999999
Q ss_pred CCcccccccccccCCccchhh-cCCC-CcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHH
Q 003878 650 VGVMDMLRYHKFTIGHAWVSD-FGCS-EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLK 727 (789)
Q Consensus 650 ~p~~d~~~~~~~~~~~~~~~e-~g~p-~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~ 727 (789)
+|+.++..+.. .|... .+.| .+++. +...+|...+.++ .+|+|++||++|.+||++++.+
T Consensus 601 ~~~~~~~~~~~-----~~~~~~~~~~~~~~~~---~~~~~~~~~~~~i----------~~P~lii~G~~D~~v~~~~~~~ 662 (706)
T 2z3z_A 601 GPVIDWNRYAI-----MYGERYFDAPQENPEG---YDAANLLKRAGDL----------KGRLMLIHGAIDPVVVWQHSLL 662 (706)
T ss_dssp SCCCCGGGSBH-----HHHHHHHCCTTTCHHH---HHHHCGGGGGGGC----------CSEEEEEEETTCSSSCTHHHHH
T ss_pred CCccchHHHHh-----hhhhhhcCCcccChhh---hhhCCHhHhHHhC----------CCCEEEEeeCCCCCCCHHHHHH
Confidence 99998754322 12222 3555 33333 4677898888876 6899999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 728 LLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 728 ~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
++++|+.. +.++++.+++++||++... ...+..+.+.+||.++|
T Consensus 663 ~~~~l~~~----------~~~~~~~~~~~~gH~~~~~--~~~~~~~~i~~fl~~~l 706 (706)
T 2z3z_A 663 FLDACVKA----------RTYPDYYVYPSHEHNVMGP--DRVHLYETITRYFTDHL 706 (706)
T ss_dssp HHHHHHHH----------TCCCEEEEETTCCSSCCTT--HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHC----------CCCeEEEEeCCCCCCCCcc--cHHHHHHHHHHHHHHhC
Confidence 99999988 8899999999999998755 33577889999999875
No 11
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=100.00 E-value=3.8e-46 Score=446.79 Aligned_cols=604 Identities=13% Similarity=0.086 Sum_probs=410.8
Q ss_pred EEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCC----ceEEEEEEEEcCCCceec-cccccccc
Q 003878 106 VLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSG----SDWATIKLMRIEDQIVEA-DALSWVCF 180 (789)
Q Consensus 106 ~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g----~~~~~i~v~dl~tg~~~~-~~~~~~~~ 180 (789)
.|++.+..+++.+.+++....+. ..+..++|||||++|||+.+..+ +...+|++||+++|+.+. ..+...
T Consensus 37 ~i~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~-- 111 (719)
T 1z68_A 37 NIVLYNIETGQSYTILSNRTMKS---VNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRP-- 111 (719)
T ss_dssp CEEEEESSSCCEEEEECHHHHHT---TTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSS--
T ss_pred CEEEEEcCCCcEEEEEccccccc---cceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecCcc--
Confidence 37777766677778887654311 12467899999999999886432 335799999999997621 112111
Q ss_pred ccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeec----cc---------------------
Q 003878 181 CFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVS----QF--------------------- 235 (789)
Q Consensus 181 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~----~~--------------------- 235 (789)
..++.+.|+|+ .++|.++ +...+|.+.. ++
T Consensus 112 ------------~~~~~~SPDG~-----------~la~~~~--~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee 166 (719)
T 1z68_A 112 ------------IQYLCWSPVGS-----------KLAYVYQ--NNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEE 166 (719)
T ss_dssp ------------BCCEEECSSTT-----------CEEEEET--TEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHH
T ss_pred ------------cccceECCCCC-----------EEEEEEC--CeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeee
Confidence 23467789998 4455443 2223332211 00
Q ss_pred ---ccceEEEEeCCcEEEEEEccCCCCCC----CCCCC-----------ccccCCcccEEEEEECCCCCCC-cEEEEe--
Q 003878 236 ---KFSSIAWTHDSKGFFYSRYPAPKEGK----DMDAG-----------TETDSNLYHEFYYHFLGTKQSE-DILCWK-- 294 (789)
Q Consensus 236 ---~~~~~~wspDg~~i~y~~~~~~~~~~----~~~~~-----------~~~~~~~~~~i~~~~lg~~~~~-~~~~~~-- 294 (789)
...+++|||||+.|+|.+.+...... ..... ..-......+|+++++.++... ...+..
T Consensus 167 ~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 246 (719)
T 1z68_A 167 MLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPA 246 (719)
T ss_dssp TTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCH
T ss_pred cccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCc
Confidence 01479999999999998875421100 00000 0000112236888888764321 011100
Q ss_pred -cCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEE----CCCCCCCcccccccCCCCccE----eeeccccc----
Q 003878 295 -DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCD----LSALPEGLEGFKKRDGLLPFV----KLIDGFDA---- 361 (789)
Q Consensus 295 -~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d----~~~g~~~~~~~~~~~~~~~~~----~l~~~~~~---- 361 (789)
...+..++..++|||||+.++. ..++.....+||++| ++++.. .... ....+...
T Consensus 247 ~~~~~~~~~~~~~~SpD~~~~~~-~~~~~~~~~~l~~~d~~~~~~~g~~-----------~~~~~~~~~~~~~~~~~~~~ 314 (719)
T 1z68_A 247 MIASSDYYFSWLTWVTDERVCLQ-WLKRVQNVSVLSICDFREDWQTWDC-----------PKTQEHIEESRTGWAGGFFV 314 (719)
T ss_dssp HHHTSCEEEEEEEESSSSEEEEE-EEESSTTEEEEEEEEECSSSSSEEC-----------CGGGEEEEECSSSCSSSSSC
T ss_pred cCCCCcceEEEeEEeCCCeEEEE-EeccccCeEEEEEEcccCCCCCCce-----------EEEEecccccCCceEccccC
Confidence 0123456678999999765544 433334457899999 766421 1111 00011111
Q ss_pred eeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEe----CCeEEEEEEEC
Q 003878 362 QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLS----DVKYVLQIRDL 437 (789)
Q Consensus 362 ~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~----~g~~~L~~~dl 437 (789)
..+.|+|||+.|++.+....+..+|+++++++++ .+.+..+. ..+.++.+.+++.+++.... .+..+|+.+++
T Consensus 315 ~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-~~~lt~~~--~~v~~~~~~d~~~i~~~~~~~~~~~~~~~l~~~~~ 391 (719)
T 1z68_A 315 STPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-AIQITSGK--WEAINIFRVTQDSLFYSSNEFEEYPGRRNIYRISI 391 (719)
T ss_dssp CCCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-CEECSCSS--SCEEEEEEECSSEEEEEESCGGGCTTCBEEEEEEC
T ss_pred CccEECCCCCeEEEEEEccCCceEEEEEECCCCc-eEecccCc--eEEEEEEEEeCCEEEEEEecCCCCCceEEEEEEeC
Confidence 1356999999988865544457899999998876 56665443 22344433354677777665 46678999998
Q ss_pred CCCc-eeeeccc----CCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCCceEEEeeecc-C-CCCCCCCC-cEE
Q 003878 438 KNGS-LLHQLPI----EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETI-I-PGFDRSEF-HVH 509 (789)
Q Consensus 438 ~tG~-~~~~l~~----~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~~~~~l~~~~-~-~~~~~~~~-~~~ 509 (789)
++|. ..+.++. ....+..+++++|++.+++.++++..| .++++|+++++ ...++.... + ..++...+ ..+
T Consensus 392 ~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~~~p-~~~l~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~ 469 (719)
T 1z68_A 392 GSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGPGIP-ISTLHDGRTDQ-EIKILEENKELENALKNIQLPKEE 469 (719)
T ss_dssp SSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCBSSC-EEEEECSSSCC-EEEEEECCHHHHHHTTSBCCCEEE
T ss_pred CCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCCCCC-eEEEEECCCCC-EEEEeecchhhhhhhccccCCceE
Confidence 6553 1245542 233455678899999999999998887 68999998885 233443211 1 12333344 467
Q ss_pred EEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccC-CCCCCHHH-HHHHHcCCeEEEEEeecCCCCCChhHH
Q 003878 510 QVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSVSR-TILMRHLGAVFCIANIRGGGEYGEEWH 587 (789)
Q Consensus 510 ~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~g~~~~ 587 (789)
.+.+++.| .+|+++++.|++..+.++.|+||++||+++... ...|...+ ..+++++||+|+++|+||+|++|..|.
T Consensus 470 ~~~~~~~~--~~l~~~~~~P~~~~~~~~~p~vl~~hG~~~~~~~~~~~~~~~~~~l~~~~G~~v~~~d~rG~g~~~~~~~ 547 (719)
T 1z68_A 470 IKKLEVDE--ITLWYKMILPPQFDRSKKYPLLIQVYGGPCSQSVRSVFAVNWISYLASKEGMVIALVDGRGTAFQGDKLL 547 (719)
T ss_dssp EEEEEETT--EEEEEEEEECTTCCSSSCEEEEEEECCCTTBCCCCCCCCCCHHHHHHHTTCCEEEEEECTTBSSSCHHHH
T ss_pred EEEEecCC--eEEEEEEEeCCCCCCCCCccEEEEECCCCCcCcccccchhhHHHHHHhcCCeEEEEEcCCCCCCCchhhH
Confidence 88888755 799999999998766678999999999987754 33444223 334446999999999999999999998
Q ss_pred hcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccc
Q 003878 588 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAW 667 (789)
Q Consensus 588 ~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~ 667 (789)
.......+...++|+.+++++|++++.+|++||+|+|+|+||++++.++.++|++|+++|+.+|+.++..+.. .+
T Consensus 548 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~-----~~ 622 (719)
T 1z68_A 548 YAVYRKLGVYEVEDQITAVRKFIEMGFIDEKRIAIWGWSYGGYVSSLALASGTGLFKCGIAVAPVSSWEYYAS-----VY 622 (719)
T ss_dssp GGGTTCTTHHHHHHHHHHHHHHHTTSCEEEEEEEEEEETHHHHHHHHHHTTSSSCCSEEEEESCCCCTTTSBH-----HH
T ss_pred HHHhhccCcccHHHHHHHHHHHHhcCCCCCceEEEEEECHHHHHHHHHHHhCCCceEEEEEcCCccChHHhcc-----cc
Confidence 8877777778899999999999998889999999999999999999999999999999999999998765421 12
Q ss_pred hh-hcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCC
Q 003878 668 VS-DFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT 746 (789)
Q Consensus 668 ~~-e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 746 (789)
.. .+|.|...+..+.+...+|..++.++ ..||+|++||++|.+||+.++.+++++|++. +
T Consensus 623 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~---------~~~P~li~~G~~D~~v~~~~~~~~~~~l~~~----------~ 683 (719)
T 1z68_A 623 TERFMGLPTKDDNLEHYKNSTVMARAEYF---------RNVDYLLIHGTADDNVHFQNSAQIAKALVNA----------Q 683 (719)
T ss_dssp HHHHHCCSSTTTTHHHHHHTCSGGGGGGG---------TTSEEEEEEETTCSSSCTHHHHHHHHHHHHT----------T
T ss_pred chhhcCCcccccchhhhhhCCHhHHHhcC---------CCCcEEEEEeCCCCCcCHHHHHHHHHHHHHC----------C
Confidence 22 24666322233446778898888876 3459999999999999999999999999988 8
Q ss_pred CcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 747 NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 747 ~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
.++++++++++||++. .. ...+..+.+.+||.++|+
T Consensus 684 ~~~~~~~~~~~gH~~~-~~-~~~~~~~~i~~fl~~~l~ 719 (719)
T 1z68_A 684 VDFQAMWYSDQNHGLS-GL-STNHLYTHMTHFLKQCFS 719 (719)
T ss_dssp CCCEEEEETTCCTTCC-TH-HHHHHHHHHHHHHHHHHC
T ss_pred CceEEEEECcCCCCCC-cc-cHHHHHHHHHHHHHHhhC
Confidence 8999999999999983 22 235778899999999875
No 12
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=100.00 E-value=2.9e-46 Score=436.75 Aligned_cols=553 Identities=14% Similarity=0.134 Sum_probs=404.1
Q ss_pred HHHHHHHHHhhhcCCCCCC-ceEeCCEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcE
Q 003878 67 RDKLREKITKLFDSPRYDA-PFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKY 145 (789)
Q Consensus 67 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~ 145 (789)
..++.+.+.++...+-+++ ..++|.+++|..+..+ ...||..+ +++.+.|+.. +...+..+.|||| +
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~DG~~la~~s~~~g--~~~lw~~~--~g~~~~lt~~------~~~~~~~~~~spd--~ 76 (582)
T 3o4h_A 9 FSRIVRDVERLIAVEKYSLQGVVDGDKLLVVGFSEG--SVNAYLYD--GGETVKLNRE------PINSVLDPHYGVG--R 76 (582)
T ss_dssp HHHHHHHHHHHHHSCEEEEEEEETTTEEEEEEEETT--EEEEEEEE--TTEEEECCSS------CCSEECEECTTCS--E
T ss_pred HHHHHHHHHHHhccchheeecCCCCCeEEEEEccCC--ceeEEEEc--CCCcEeeecc------cccccccccCCCC--e
Confidence 4556666666655554433 3578999999877444 34588853 3443443322 2235678899999 6
Q ss_pred EEEEEec-CCceEEEEEEEEc--CCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeecc
Q 003878 146 LAYALSY-SGSDWATIKLMRI--EDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVK 222 (789)
Q Consensus 146 la~~~~~-~g~~~~~i~v~dl--~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~ 222 (789)
++|+.+. +|.+...||.+++ .++.. . +....
T Consensus 77 ~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~--l~~~~------------------------------------------- 110 (582)
T 3o4h_A 77 VILVRDVSKGAEQHALFKVNTSRPGEEQ-R--LEAVK------------------------------------------- 110 (582)
T ss_dssp EEEEEECSTTSCCEEEEEEETTSTTCCE-E--CTTSC-------------------------------------------
T ss_pred EEEEeccCCCCcceEEEEEeccCCCccc-c--ccCCC-------------------------------------------
Confidence 7887775 5667788999998 55433 1 11110
Q ss_pred ccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeE
Q 003878 223 STIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYI 302 (789)
Q Consensus 223 ~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~ 302 (789)
.....+|||||+.++|..... ..+.++++.++. ...+...+.
T Consensus 111 -------------~~~~~~~s~dg~~~~~~s~~~------------------~~~~l~d~~~g~--~~~l~~~~~----- 152 (582)
T 3o4h_A 111 -------------PMRILSGVDTGEAVVFTGATE------------------DRVALYALDGGG--LRELARLPG----- 152 (582)
T ss_dssp -------------SBEEEEEEECSSCEEEEEECS------------------SCEEEEEEETTE--EEEEEEESS-----
T ss_pred -------------CceeeeeCCCCCeEEEEecCC------------------CCceEEEccCCc--EEEeecCCC-----
Confidence 124679999999998875432 113356776543 233444332
Q ss_pred EEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEEecCCCEEEEEECCCC
Q 003878 303 FSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDA 381 (789)
Q Consensus 303 ~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dG~~l~~~tn~~~ 381 (789)
.++.|||||++|++.+.+.. ....||++|++++. ...++.... ...+.|||||+.|+ .++.+
T Consensus 153 ~~~~~spDG~~la~~~~~~~-~~~~i~~~d~~~g~--------------~~~l~~~~~~~~~~~~SpDG~~l~-~~~~~- 215 (582)
T 3o4h_A 153 FGFVSDIRGDLIAGLGFFGG-GRVSLFTSNLSSGG--------------LRVFDSGEGSFSSASISPGMKVTA-GLETA- 215 (582)
T ss_dssp CEEEEEEETTEEEEEEEEET-TEEEEEEEETTTCC--------------CEEECCSSCEEEEEEECTTSCEEE-EEECS-
T ss_pred ceEEECCCCCEEEEEEEcCC-CCeEEEEEcCCCCC--------------ceEeecCCCccccceECCCCCEEE-EccCC-
Confidence 36889999999998876543 23669999998753 233433222 23456999999998 44443
Q ss_pred CCceEEEEECCCCCCeEEeccCCCCceeeeEE--------EecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeE
Q 003878 382 PKYKIIRVDLKEPNDWFEVIPEAERDVLESAT--------AVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSV 453 (789)
Q Consensus 382 ~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~--------~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v 453 (789)
...+|+++|+++++ .+ ++... ...+.++. |++++.++++...++. +.+|++ |+..+ .+.+.+
T Consensus 216 ~~~~i~~~d~~~~~-~~-~~~~~-~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~--~~l~~~--g~~~~---~~~~~v 285 (582)
T 3o4h_A 216 REARLVTVDPRDGS-VE-DLELP-SKDFSSYRPTAITWLGYLPDGRLAVVARREGR--SAVFID--GERVE---APQGNH 285 (582)
T ss_dssp SCEEEEEECTTTCC-EE-ECCCS-CSHHHHHCCSEEEEEEECTTSCEEEEEEETTE--EEEEET--TEEEC---CCSSEE
T ss_pred CeeEEEEEcCCCCc-EE-EccCC-CcChhhhhhccccceeEcCCCcEEEEEEcCCc--EEEEEE--CCeec---cCCCce
Confidence 34689999999887 44 44433 23344555 8887789999998885 555556 65533 234567
Q ss_pred EEeecccCCcEEEEEEcCCCCCcEEEEEECCCCCceEEEeeeccCCCCCC---CC-CcEEEEEEecCCCceEEEEEEEec
Q 003878 454 NAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDR---SE-FHVHQVFVPSKDGSTKIPMFIVSK 529 (789)
Q Consensus 454 ~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~~~~~l~~~~~~~~~~---~~-~~~~~~~~~s~dg~~~i~~~l~~p 529 (789)
..++++ ++. ++++.++..+|+++|.+|..+ + .+.+ .+++ .. ...+.+.+++.+| .+|+++++.|
T Consensus 286 ~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~-~--~~~l------~~~~~~~~~~~~~~~~~~~~~~g-~~i~~~~~~p 353 (582)
T 3o4h_A 286 GRVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE-P--LLEG------GLPEDLRRSIAGSRLVWVESFDG-SRVPTYVLES 353 (582)
T ss_dssp EEEEEE-TTE-EEEEEEETTEEEEEEEETTCC-E--EECC------CCCHHHHHTEEEEEEEEEECTTS-CEEEEEEEEE
T ss_pred EEEEec-CCE-EEEEEcCCCCCCeEEEEcCCC-c--eEEE------ecCCccccccCcceEEEEECCCC-CEEEEEEEcC
Confidence 778888 665 567888999999999999754 2 3333 1222 22 3578899999999 9999999999
Q ss_pred CCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHH
Q 003878 530 KNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYL 609 (789)
Q Consensus 530 ~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L 609 (789)
++.. .+.|+||++||+++......|.... ..|+++||+|+++|+||++++|..|............++|+.+++++|
T Consensus 354 ~~~~--~~~p~vv~~HG~~~~~~~~~~~~~~-~~l~~~G~~v~~~d~rG~~~~G~s~~~~~~~~~~~~~~~d~~~~~~~l 430 (582)
T 3o4h_A 354 GRAP--TPGPTVVLVHGGPFAEDSDSWDTFA-ASLAAAGFHVVMPNYRGSTGYGEEWRLKIIGDPCGGELEDVSAAARWA 430 (582)
T ss_dssp TTSC--SSEEEEEEECSSSSCCCCSSCCHHH-HHHHHTTCEEEEECCTTCSSSCHHHHHTTTTCTTTHHHHHHHHHHHHH
T ss_pred CCCC--CCCcEEEEECCCcccccccccCHHH-HHHHhCCCEEEEeccCCCCCCchhHHhhhhhhcccccHHHHHHHHHHH
Confidence 9753 3889999999998877677777654 444459999999999999999999999888888888999999999999
Q ss_pred HHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCcc--chhh-cCCCCcHHHHHHHHhc
Q 003878 610 ISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHA--WVSD-FGCSEEEEEFYWLIKY 686 (789)
Q Consensus 610 ~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~--~~~e-~g~p~~~~~~~~l~~~ 686 (789)
++++.+| +|+++|+|+||++++.++.++|++|+++|+.+|+.++........... |... +| .++ +.+..+
T Consensus 431 ~~~~~~d--~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---~~~~~~ 503 (582)
T 3o4h_A 431 RESGLAS--ELYIMGYSYGGYMTLCALTMKPGLFKAGVAGASVVDWEEMYELSDAAFRNFIEQLTG--GSR---EIMRSR 503 (582)
T ss_dssp HHTTCEE--EEEEEEETHHHHHHHHHHHHSTTTSSCEEEESCCCCHHHHHHTCCHHHHHHHHHHTT--TCH---HHHHHT
T ss_pred HhCCCcc--eEEEEEECHHHHHHHHHHhcCCCceEEEEEcCCccCHHHHhhcccchhHHHHHHHcC--cCH---HHHHhc
Confidence 9998887 999999999999999999999999999999999999876543222211 2222 23 333 446889
Q ss_pred CcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchh
Q 003878 687 SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQ 766 (789)
Q Consensus 687 sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~ 766 (789)
+|+.++.++ .+|+|++||++|.+||+.++.+++++|+.. |.++++++++++||++.....
T Consensus 504 sp~~~~~~i----------~~P~lii~G~~D~~v~~~~~~~~~~~l~~~----------g~~~~~~~~~~~gH~~~~~~~ 563 (582)
T 3o4h_A 504 SPINHVDRI----------KEPLALIHPQNASRTPLKPLLRLMGELLAR----------GKTFEAHIIPDAGHAINTMED 563 (582)
T ss_dssp CGGGGGGGC----------CSCEEEEEETTCSSSCHHHHHHHHHHHHHT----------TCCEEEEEETTCCSSCCBHHH
T ss_pred CHHHHHhcC----------CCCEEEEecCCCCCcCHHHHHHHHHHHHhC----------CCCEEEEEECCCCCCCCChHH
Confidence 999998886 799999999999999999999999999998 899999999999999874434
Q ss_pred hHHHHHHHHHHHHHHHhCC
Q 003878 767 KMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 767 ~~~~~~~~~~~fl~~~l~~ 785 (789)
..+..+.+.+||.++|+.
T Consensus 564 -~~~~~~~i~~fl~~~l~~ 581 (582)
T 3o4h_A 564 -AVKILLPAVFFLATQRER 581 (582)
T ss_dssp -HHHHHHHHHHHHHHHHTC
T ss_pred -HHHHHHHHHHHHHHHcCC
Confidence 467888999999999874
No 13
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=100.00 E-value=7.1e-45 Score=435.59 Aligned_cols=601 Identities=14% Similarity=0.126 Sum_probs=400.6
Q ss_pred EEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCc----eEEEEEEEEcCCCceecccccccccc
Q 003878 106 VLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGS----DWATIKLMRIEDQIVEADALSWVCFC 181 (789)
Q Consensus 106 ~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~----~~~~i~v~dl~tg~~~~~~~~~~~~~ 181 (789)
.|++-+..+++.+.+++...... ..+.+++|||||++|||+.+..+. ...+|++||+++|+... +....+
T Consensus 38 ~i~~~d~~~g~~~~~~~~~~~~~---~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~--l~~~~~- 111 (723)
T 1xfd_A 38 TVRLWNVETNTSTVLIEGKKIES---LRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQS--LDPPEV- 111 (723)
T ss_dssp CEEEBCGGGCCCEEEECTTTTTT---TTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEE--CCCTTC-
T ss_pred CEEEEECCCCcEEEEeccccccc---cccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEe--ccCCcc-
Confidence 36666655666677776544321 125688999999999999764332 13689999999997522 111100
Q ss_pred cccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeec------cc--------------------
Q 003878 182 FSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVS------QF-------------------- 235 (789)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~------~~-------------------- 235 (789)
+ ..-..++.+.|+|+ .++|.++ + +||.++. ++
T Consensus 112 --~-----~~~~~~~~~SPdG~-----------~la~~~~--~--~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~e 169 (723)
T 1xfd_A 112 --S-----NAKLQYAGWGPKGQ-----------QLIFIFE--N--NIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE 169 (723)
T ss_dssp --C-----SCCCSBCCBCSSTT-----------CEEEEET--T--EEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHH
T ss_pred --c-----cccccccEECCCCC-----------EEEEEEC--C--eEEEEECCCCceEEEecCCCCCceECcccceeEEE
Confidence 0 00123567889998 4455544 1 2333222 00
Q ss_pred ----ccceEEEEeCCcEEEEEEccCCCCC-CCCC--CCc----------cc--cCCcccEEEEEECCCCCCCcEEEEecC
Q 003878 236 ----KFSSIAWTHDSKGFFYSRYPAPKEG-KDMD--AGT----------ET--DSNLYHEFYYHFLGTKQSEDILCWKDP 296 (789)
Q Consensus 236 ----~~~~~~wspDg~~i~y~~~~~~~~~-~~~~--~~~----------~~--~~~~~~~i~~~~lg~~~~~~~~~~~~~ 296 (789)
...+++|||||+.|+|...+..... ..+. .+. .. ......+|+++++.++... .....+
T Consensus 170 e~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~--~~l~~~ 247 (723)
T 1xfd_A 170 EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHD--LEMMPP 247 (723)
T ss_dssp TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCC--EECCCC
T ss_pred EeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCcee--EEeeCC
Confidence 0146999999999999987642110 0000 000 00 0112347889998765422 112211
Q ss_pred C----CCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec----cccc---eeEE
Q 003878 297 E----HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID----GFDA---QYEV 365 (789)
Q Consensus 297 ~----~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~----~~~~---~~~~ 365 (789)
. +...+..+.|||||++|++...+. .....|+++|++++. ...+.. ++.. ....
T Consensus 248 ~~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~~i~~~d~~~g~--------------~~~~~~~~~~~~~~~~~~~~~ 312 (723)
T 1xfd_A 248 DDPRMREYYITMVKWATSTKVAVTWLNRA-QNVSILTLCDATTGV--------------CTKKHEDESEAWLHRQNEEPV 312 (723)
T ss_dssp CCGGGSSEEEEEEEESSSSEEEEEEEETT-SCEEEEEEEETTTCC--------------EEEEEEEECSSCCCCCCCCCE
T ss_pred ccCCCccceeEEEEEeCCCeEEEEEEcCC-CCeEEEEEEeCCCCc--------------ceEEEEeccCCEEeccCCCce
Confidence 1 134567899999999887766543 335789999998752 111111 1110 1356
Q ss_pred EecCCCEEEEE-ECCCC---CCceEEEEE-CCCCCC--eEEeccCCCCceeeeEEEecCC-EEEEEEEeC--CeEEEEEE
Q 003878 366 IANDDTVFTFL-TNKDA---PKYKIIRVD-LKEPND--WFEVIPEAERDVLESATAVNLN-QMIVSYLSD--VKYVLQIR 435 (789)
Q Consensus 366 ~s~dG~~l~~~-tn~~~---~~~~L~~~d-l~~~~~--~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~--g~~~L~~~ 435 (789)
|+|||+.|++. ++.++ ...+|+.+| ..++.. .+.+.... ......+.|++++ .|++....+ +..+|+.+
T Consensus 313 ~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~-~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~ 391 (723)
T 1xfd_A 313 FSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGD-WDVTKILAYDEKGNKIYFLSTEDLPRRRQLYSA 391 (723)
T ss_dssp ECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSS-SCEEEEEEEETTTTEEEEEESSSCTTCCEEEEE
T ss_pred EcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCC-eEEEeeeEEcCCCCEEEEEEcCCCCcceEEEEE
Confidence 99999999987 44432 145899999 444320 34444332 2333346788754 566665554 55678888
Q ss_pred ECCCCceeeeccc---CCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCCceEEEeeecc-C-CCCCCCCC-cEE
Q 003878 436 DLKNGSLLHQLPI---EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRETI-I-PGFDRSEF-HVH 509 (789)
Q Consensus 436 dl~tG~~~~~l~~---~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~~~~~l~~~~-~-~~~~~~~~-~~~ 509 (789)
+++++...+.|+. +.+.+..+++++|++.+++.++++..|..++. +..+++ +...+.... . ..+....+ ..+
T Consensus 392 ~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~p~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 469 (723)
T 1xfd_A 392 NTVGNFNRQCLSCDLVENCTYFSASFSHSMDFFLLKCEGPGVPMVTVH-NTTDKK-KMFDLETNEHVKKAINDRQMPKVE 469 (723)
T ss_dssp CSSTTCCCBCSSTTSSSSCCCCEEEECTTSSEEEEECCSSSSCCEEEE-ETTTCC-EEEEEECCHHHHHHHHTSCCCBCC
T ss_pred eCCCCCCcceecccccCCCCeEEEEECCCCCEEEEEccCCCCCeEEEE-ECCCCC-EEEEeccChhhhhhhhhccCCCce
Confidence 7764433345553 23445678899999999999999999987654 765554 333443211 0 01112223 456
Q ss_pred EEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccC-CCCCCH-HHHHHHHcCCeEEEEEeecCCCCCChhHH
Q 003878 510 QVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSV-SRTILMRHLGAVFCIANIRGGGEYGEEWH 587 (789)
Q Consensus 510 ~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~-~~~~~l~~~G~~v~~~~~RG~g~~g~~~~ 587 (789)
.+.+++.|| +|+++++.|++..+.++.|+||++||+++... ...|.. ....+++++||+|+++|+||+|++|..|.
T Consensus 470 ~~~~~~~~g--~l~~~~~~P~~~~~~~~~p~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~G~~vv~~d~rG~g~~g~~~~ 547 (723)
T 1xfd_A 470 YRDIEIDDY--NLPMQILKPATFTDTTHYPLLLVVDGTPGSQSVAEKFEVSWETVMVSSHGAVVVKCDGRGSGFQGTKLL 547 (723)
T ss_dssp BCCEEETTE--EECCBEEBCSSCCSSSCEEEEEECCCCTTCCCCCCCCCCSHHHHHHHTTCCEEECCCCTTCSSSHHHHH
T ss_pred EEEEEcCCc--eEEEEEEeCCCCCCCCccCEEEEEcCCCCccccCccccccHHHHHhhcCCEEEEEECCCCCccccHHHH
Confidence 778888887 89999999998766788999999999987642 333331 23456666899999999999999999998
Q ss_pred hcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC----CCceeEEEecCCcccccccccccC
Q 003878 588 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR----PDLFGCALAHVGVMDMLRYHKFTI 663 (789)
Q Consensus 588 ~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~----pd~f~a~v~~~p~~d~~~~~~~~~ 663 (789)
.......+...++|+.+++++|.+++.+|++||+|+|+|+||++++.++.++ |++|+++|+.+|+.++..+..
T Consensus 548 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~v~~~~~~~~~~~~~--- 624 (723)
T 1xfd_A 548 HEVRRRLGLLEEKDQMEAVRTMLKEQYIDRTRVAVFGKDYGGYLSTYILPAKGENQGQTFTCGSALSPITDFKLYAS--- 624 (723)
T ss_dssp HTTTTCTTTHHHHHHHHHHHHHHSSSSEEEEEEEEEEETHHHHHHHHCCCCSSSTTCCCCSEEEEESCCCCTTSSBH---
T ss_pred HHHHhccCcccHHHHHHHHHHHHhCCCcChhhEEEEEECHHHHHHHHHHHhccccCCCeEEEEEEccCCcchHHhhh---
Confidence 7766666667899999999999998888999999999999999999999999 999999999999988754321
Q ss_pred Cccchh-hcCCCC-cHHHHHHHHhcCcccCCCCCCCCCCCCCCCC-CeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCC
Q 003878 664 GHAWVS-DFGCSE-EEEEFYWLIKYSPLHNVRRPWEQNPDKPFQY-PSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSL 740 (789)
Q Consensus 664 ~~~~~~-e~g~p~-~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~-pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~ 740 (789)
.+.. ..|.|. .++ .+...+|..++.++ . +|+||+||++|.+||+.++.+++++|+..
T Consensus 625 --~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~----------~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~----- 684 (723)
T 1xfd_A 625 --AFSERYLGLHGLDNR---AYEMTKVAHRVSAL----------EEQQFLIIHPTADEKIHFQHTAELITQLIRG----- 684 (723)
T ss_dssp --HHHHHHHCCCSSCCS---STTTTCTHHHHTSC----------CSCEEEEEEETTCSSSCHHHHHHHHHHHHHT-----
T ss_pred --hccHhhcCCccCChh---HHHhcChhhHHhhc----------CCCCEEEEEeCCCCCcCHhHHHHHHHHHHHC-----
Confidence 1111 124442 211 13455666666665 5 79999999999999999999999999987
Q ss_pred CCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 741 ENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 741 ~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
+.++++++++++||++..... ..+....+.+||.++|++
T Consensus 685 -----~~~~~~~~~~~~~H~~~~~~~-~~~~~~~i~~fl~~~l~~ 723 (723)
T 1xfd_A 685 -----KANYSLQIYPDESHYFTSSSL-KQHLYRSIINFFVECFRI 723 (723)
T ss_dssp -----TCCCEEEEETTCCSSCCCHHH-HHHHHHHHHHHHTTTTCC
T ss_pred -----CCCeEEEEECCCCcccccCcc-hHHHHHHHHHHHHHHhcC
Confidence 889999999999999854433 357788899999988874
No 14
>2jbw_A Dhpon-hydrolase, 2,6-dihydroxy-pseudo-oxynicotine hydrolase; alpha/beta hydrolase, META-cleavage pathway; 2.1A {Arthrobacter nicotinovorans} SCOP: c.69.1.41
Probab=99.91 E-value=1.8e-23 Score=231.09 Aligned_cols=278 Identities=13% Similarity=0.070 Sum_probs=200.0
Q ss_pred EEEEEcCCCCCcEEEEEECCCCCceEEEeeeccCCCCCCCCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEE
Q 003878 465 VFISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYG 544 (789)
Q Consensus 465 l~~~~ss~~~P~~ly~~dl~tg~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~ 544 (789)
+++..+++..|.++|.++..+.......++. ....++......+++.+++ || .+|+++++.|++. ++.|+||++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~-dg-~~i~~~l~~p~~~---~~~P~vl~~ 158 (386)
T 2jbw_A 85 LLMSAALCAQYAQFLWFDERRQKGQARKVEL-YQKAAPLLSPPAERHELVV-DG-IPMPVYVRIPEGP---GPHPAVIML 158 (386)
T ss_dssp HHHHHHHHHHHHHTTCCSTHHHHHHHHHHHH-HHHHGGGSSSCEEEEEEEE-TT-EEEEEEEECCSSS---CCEEEEEEE
T ss_pred HHHHHHHhhceeeeeccCCCCCHHHHHHHHH-HHHHHhhcCCCeEEEEEEe-CC-EEEEEEEEcCCCC---CCCCEEEEe
Confidence 4455566677888777664311000000000 0011222245688999988 89 9999999999873 678999999
Q ss_pred cCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEe
Q 003878 545 YGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEG 624 (789)
Q Consensus 545 hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G 624 (789)
||+.+.. ...+.. ...+.++||+|+++|+||.|+.. ..........+|+.+++++|.+++.+++++|+|+|
T Consensus 159 hG~~~~~-~~~~~~--~~~l~~~G~~v~~~d~rG~G~s~------~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G 229 (386)
T 2jbw_A 159 GGLESTK-EESFQM--ENLVLDRGMATATFDGPGQGEMF------EYKRIAGDYEKYTSAVVDLLTKLEAIRNDAIGVLG 229 (386)
T ss_dssp CCSSCCT-TTTHHH--HHHHHHTTCEEEEECCTTSGGGT------TTCCSCSCHHHHHHHHHHHHHHCTTEEEEEEEEEE
T ss_pred CCCCccH-HHHHHH--HHHHHhCCCEEEEECCCCCCCCC------CCCCCCccHHHHHHHHHHHHHhCCCcCcccEEEEE
Confidence 8865433 333332 34444599999999999987641 11223345557899999999999989999999999
Q ss_pred eChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCC---ccchhhcCCCCcHHHH-HHHHhcCcccCCCCCCCCCC
Q 003878 625 GSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG---HAWVSDFGCSEEEEEF-YWLIKYSPLHNVRRPWEQNP 700 (789)
Q Consensus 625 ~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~---~~~~~e~g~p~~~~~~-~~l~~~sP~~~v~~~~~~~~ 700 (789)
+|+||++++.++.+ |++|+++|+. |+.++......... ..+...+|.+...+.+ +.+..++|..++.++
T Consensus 230 ~S~GG~la~~~a~~-~~~~~a~v~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i----- 302 (386)
T 2jbw_A 230 RSLGGNYALKSAAC-EPRLAACISW-GGFSDLDYWDLETPLTKESWKYVSKVDTLEEARLHVHAALETRDVLSQI----- 302 (386)
T ss_dssp ETHHHHHHHHHHHH-CTTCCEEEEE-SCCSCSTTGGGSCHHHHHHHHHHTTCSSHHHHHHHHHHHTCCTTTGGGC-----
T ss_pred EChHHHHHHHHHcC-CcceeEEEEe-ccCChHHHHHhccHHHHHHHHHHhCCCCHHHHHHHHHHhCChhhhhccc-----
Confidence 99999999999999 8999999999 99988655431100 1112345665444555 678899999888876
Q ss_pred CCCCCCCeEEEEecCCCCCCCcHHHHHHHHHH-HHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHH
Q 003878 701 DKPFQYPSTLLLTADHDDRVVPLHSLKLLATM-QYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 779 (789)
Q Consensus 701 ~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L-~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl 779 (789)
.+|+|+++|++|. |++.++.+++++| +. ++++++++++||.+.. ...+..+.+.+||
T Consensus 303 -----~~P~Lii~G~~D~-v~~~~~~~l~~~l~~~-------------~~~~~~~~~~gH~~~~---~~~~~~~~i~~fl 360 (386)
T 2jbw_A 303 -----ACPTYILHGVHDE-VPLSFVDTVLELVPAE-------------HLNLVVEKDGDHCCHN---LGIRPRLEMADWL 360 (386)
T ss_dssp -----CSCEEEEEETTSS-SCTHHHHHHHHHSCGG-------------GEEEEEETTCCGGGGG---GTTHHHHHHHHHH
T ss_pred -----CCCEEEEECCCCC-CCHHHHHHHHHHhcCC-------------CcEEEEeCCCCcCCcc---chHHHHHHHHHHH
Confidence 6899999999999 9999999999988 42 4689999999997632 2346778899999
Q ss_pred HHHhCCC
Q 003878 780 AKMLGAS 786 (789)
Q Consensus 780 ~~~l~~~ 786 (789)
.++|+..
T Consensus 361 ~~~l~~~ 367 (386)
T 2jbw_A 361 YDVLVAG 367 (386)
T ss_dssp HHHHTSS
T ss_pred HHhcCCc
Confidence 9999864
No 15
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=99.89 E-value=1.9e-22 Score=218.21 Aligned_cols=246 Identities=19% Similarity=0.210 Sum_probs=178.8
Q ss_pred CCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCC
Q 003878 504 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 583 (789)
Q Consensus 504 ~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g 583 (789)
..+.++.+.+++.|| .+|+++++.|++. .++.|+||++||+.+... +......++. +||+|+++|+||.|+.+
T Consensus 64 ~~~~~~~~~~~~~dg-~~i~~~~~~P~~~--~~~~p~vv~~HG~g~~~~---~~~~~~~l~~-~G~~v~~~d~rG~g~s~ 136 (337)
T 1vlq_A 64 KTVEAYDVTFSGYRG-QRIKGWLLVPKLE--EEKLPCVVQYIGYNGGRG---FPHDWLFWPS-MGYICFVMDTRGQGSGW 136 (337)
T ss_dssp SSEEEEEEEEECGGG-CEEEEEEEEECCS--CSSEEEEEECCCTTCCCC---CGGGGCHHHH-TTCEEEEECCTTCCCSS
T ss_pred CCeEEEEEEEEcCCC-CEEEEEEEecCCC--CCCccEEEEEcCCCCCCC---Cchhhcchhh-CCCEEEEecCCCCCCcc
Confidence 456788999999999 9999999999873 467899999999765532 2222234444 99999999999998554
Q ss_pred hh-----------------HHhcccccCC----cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCc
Q 003878 584 EE-----------------WHKGGALAKK----QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL 642 (789)
Q Consensus 584 ~~-----------------~~~~~~~~~~----~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~ 642 (789)
.. |...+..... ...++|+.+++++|.+++.+|+++|+++|+|+||.+++.++.++| .
T Consensus 137 ~~~~~~~~p~~~~~~~~~~~~~~g~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p-~ 215 (337)
T 1vlq_A 137 LKGDTPDYPEGPVDPQYPGFMTRGILDPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIALAVSALSK-K 215 (337)
T ss_dssp SCCCCCBCCSSSBCCCCSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHCS-S
T ss_pred cCCCCcccccccCCCCCCcccccCCCCHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHHHHHHhcCC-C
Confidence 21 0001100100 145899999999999998889999999999999999999999998 4
Q ss_pred eeEEEecCCccccccc-ccccCCccch--hhc--CCC-CcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCC
Q 003878 643 FGCALAHVGVMDMLRY-HKFTIGHAWV--SDF--GCS-EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADH 716 (789)
Q Consensus 643 f~a~v~~~p~~d~~~~-~~~~~~~~~~--~e~--g~p-~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~ 716 (789)
++++|+.+|+++.... ........+. .+| ..+ ...+.+..+..++|...+.++ .+|+|+++|++
T Consensus 216 v~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----------~~P~lii~G~~ 285 (337)
T 1vlq_A 216 AKALLCDVPFLCHFRRAVQLVDTHPYAEITNFLKTHRDKEEIVFRTLSYFDGVNFAARA----------KIPALFSVGLM 285 (337)
T ss_dssp CCEEEEESCCSCCHHHHHHHCCCTTHHHHHHHHHHCTTCHHHHHHHHHTTCHHHHHTTC----------CSCEEEEEETT
T ss_pred ccEEEECCCcccCHHHHHhcCCCcchHHHHHHHHhCchhHHHHHHhhhhccHHHHHHHc----------CCCEEEEeeCC
Confidence 8899999986653221 1111100110 111 233 233445566777888777776 69999999999
Q ss_pred CCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 717 DDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 717 D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
|.+||++++.+++++|+ .++++.+++++||++.. .+....+++||.++|+.
T Consensus 286 D~~~p~~~~~~~~~~l~-------------~~~~~~~~~~~gH~~~~-----~~~~~~~~~fl~~~l~~ 336 (337)
T 1vlq_A 286 DNICPPSTVFAAYNYYA-------------GPKEIRIYPYNNHEGGG-----SFQAVEQVKFLKKLFEK 336 (337)
T ss_dssp CSSSCHHHHHHHHHHCC-------------SSEEEEEETTCCTTTTH-----HHHHHHHHHHHHHHHC-
T ss_pred CCCCCchhHHHHHHhcC-------------CCcEEEEcCCCCCCCcc-----hhhHHHHHHHHHHHHhc
Confidence 99999999998887764 25789999999999732 24567889999998863
No 16
>3ga7_A Acetyl esterase; phosphoserine, IDP00896, hydrolase, serine structural genomics, center for structural genomics of INFE diseases, csgid; HET: SEP MSE; 1.55A {Salmonella typhimurium}
Probab=99.89 E-value=9.1e-22 Score=212.11 Aligned_cols=244 Identities=16% Similarity=0.113 Sum_probs=171.4
Q ss_pred CCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHc-CCeEEEEEeecCCCCCC
Q 003878 505 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH-LGAVFCIANIRGGGEYG 583 (789)
Q Consensus 505 ~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~g 583 (789)
.+..+.+++++.|| +|++.++.|++. +.|+||++|||................|++ .||+|+.+|||++++..
T Consensus 60 ~~~~~~~~~~~~~g--~i~~~~~~p~~~----~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~V~~~dyr~~p~~~ 133 (326)
T 3ga7_A 60 SMTTRTCAVPTPYG--DVTTRLYSPQPT----SQATLYYLHGGGFILGNLDTHDRIMRLLARYTGCTVIGIDYSLSPQAR 133 (326)
T ss_dssp CCEEEEEEECCTTS--CEEEEEEESSSS----CSCEEEEECCSTTTSCCTTTTHHHHHHHHHHHCSEEEEECCCCTTTSC
T ss_pred CcceEEEEeecCCC--CeEEEEEeCCCC----CCcEEEEECCCCcccCChhhhHHHHHHHHHHcCCEEEEeeCCCCCCCC
Confidence 45568899999888 699999999862 339999999987443333333334555553 69999999999887642
Q ss_pred hhHHhcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCCCc------eeEEEecCCccc
Q 003878 584 EEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPDL------FGCALAHVGVMD 654 (789)
Q Consensus 584 ~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~pd~------f~a~v~~~p~~d 654 (789)
....++|+.++++||.++. .+|++||+|+|+|+||.+++.++.++|+. ++++|+.+|+.+
T Consensus 134 -----------~~~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~la~~~a~~~~~~~~~~~~~~~~vl~~~~~~ 202 (326)
T 3ga7_A 134 -----------YPQAIEETVAVCSYFSQHADEYSLNVEKIGFAGDSAGAMLALASALWLRDKHIRCGNVIAILLWYGLYG 202 (326)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTTTTTTCCCSEEEEEEETHHHHHHHHHHHHHHHHTCCSSEEEEEEEESCCCS
T ss_pred -----------CCcHHHHHHHHHHHHHHhHHHhCCChhheEEEEeCHHHHHHHHHHHHHHhcCCCccCceEEEEeccccc
Confidence 3456799999999999874 46999999999999999999999988775 899999999887
Q ss_pred ccccccccCCccchhhcCCCCcHHHHHHHHhc--------CcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHH
Q 003878 655 MLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKY--------SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSL 726 (789)
Q Consensus 655 ~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~--------sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~ 726 (789)
......... +...+-.........++..| +|+...... .-....||+||+||+.|.+| .++.
T Consensus 203 ~~~~~~~~~---~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~P~li~~G~~D~~~--~~~~ 272 (326)
T 3ga7_A 203 LQDSVSRRL---FGGAWDGLTREDLDMYEKAYLRNDEDRESPWYCLFNN-----DLTRDVPPCFIASAEFDPLI--DDSR 272 (326)
T ss_dssp CSCCHHHHH---CCCTTTTCCHHHHHHHHHHHCSSGGGGGCTTTSGGGS-----CCSSCCCCEEEEEETTCTTH--HHHH
T ss_pred cCCChhHhh---hcCCCCCCCHHHHHHHHHHhCCCCCccCCcccCCCcc-----hhhcCCCCEEEEecCcCcCH--HHHH
Confidence 643221000 00000000111111111111 333221000 00013789999999999998 4889
Q ss_pred HHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc---hhhHHHHHHHHHHHHHHHhCC
Q 003878 727 KLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 727 ~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~ 785 (789)
+++++|++. |.+++++++++++|++... ..+..+..+++.+||.++++.
T Consensus 273 ~~~~~l~~~----------g~~~~~~~~~g~~H~f~~~~~~~~~~~~~~~~~~~fl~~~l~~ 324 (326)
T 3ga7_A 273 LLHQTLQAH----------QQPCEYKMYPGTLHAFLHYSRMMTIADDALQDGARFFMARMKT 324 (326)
T ss_dssp HHHHHHHHT----------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHC----------CCcEEEEEeCCCccchhhhcCccHHHHHHHHHHHHHHHHHhcc
Confidence 999999998 9999999999999998432 123457788999999998864
No 17
>2o7r_A CXE carboxylesterase; alpha/beta hydrolase; 1.40A {Actinidia eriantha} PDB: 2o7v_A
Probab=99.89 E-value=8.9e-24 Score=228.99 Aligned_cols=286 Identities=12% Similarity=0.032 Sum_probs=178.0
Q ss_pred ccCCcEEEEEEcCCCCCcEEEEEECCCCCceEEE-eeeccCC-CCCC---CCCcEEEEEEecCCCceEEEEEEEecCCC-
Q 003878 459 RREDSVVFISFTSFLIPGIVYQCNLKTETPEMKI-FRETIIP-GFDR---SEFHVHQVFVPSKDGSTKIPMFIVSKKNI- 532 (789)
Q Consensus 459 s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~~~~~-l~~~~~~-~~~~---~~~~~~~~~~~s~dg~~~i~~~l~~p~~~- 532 (789)
+++.+++++.+.++..|...++++. +|+ ... +.....+ ..++ ..+..+.+.+.+ + ..+++.++.|++.
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~-~g~--~~r~~~~~~~~~~~~~~~~~~v~~~~v~~~~--~-~~~~~~~~~P~~~~ 77 (338)
T 2o7r_A 4 DHLETTGSSDPNTNLLKYLPIVLNP-DRT--ITRPIQIPSTAASPDPTSSSPVLTKDLALNP--L-HNTFVRLFLPRHAL 77 (338)
T ss_dssp --------------CTTTCSCEECT-TSC--EECCSCCCBCCCCCCTTSSCSEEEEEEEEET--T-TTEEEEEEEEGGGG
T ss_pred CCCCCceeeccCcccccccceEECC-CCe--EEecCCCCCCCCCCCcccCCCEEEEEEEecC--C-CCeEEEEEeCCCCC
Confidence 3456678888888888887777765 443 222 2222222 2333 456778888876 4 5688888999864
Q ss_pred CCCCCccEEEEEcCCCCccCCCC---CCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHH
Q 003878 533 KLDGSHPCLLYGYGGFNISVTPS---FSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYL 609 (789)
Q Consensus 533 ~~~~~~P~ll~~hGg~~~~~~~~---~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L 609 (789)
..+++.|+||++|||........ |......+..++|++|+.+|+||+++.. ....++|+.++++||
T Consensus 78 ~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~~~la~~~g~~vv~~d~rg~~~~~-----------~~~~~~d~~~~~~~l 146 (338)
T 2o7r_A 78 YNSAKLPLVVYFHGGGFILFSAASTIFHDFCCEMAVHAGVVIASVDYRLAPEHR-----------LPAAYDDAMEALQWI 146 (338)
T ss_dssp GSSCCEEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHHTCEEEEEECCCTTTTC-----------TTHHHHHHHHHHHHH
T ss_pred cCCCCceEEEEEcCCcCcCCCCCchhHHHHHHHHHHHCCcEEEEecCCCCCCCC-----------CchHHHHHHHHHHHH
Confidence 34578999999999875544333 4443444543589999999999977532 245689999999999
Q ss_pred HHcC------CCCCCcEEEEeeChHHHHHHHHHHhCCC--------ceeEEEecCCcccccccccccCCccchhhcCCC-
Q 003878 610 ISAG------YTQSRKLCIEGGSNGGLLVGACINQRPD--------LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCS- 674 (789)
Q Consensus 610 ~~~~------~~d~~~i~i~G~S~GG~l~~~~~~~~pd--------~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p- 674 (789)
.++. .+|++|++++|+|+||.+++.++.++|+ +++++|+.+|+.++...... .......+
T Consensus 147 ~~~~~~~~~~~~d~~~v~l~G~S~GG~ia~~~a~~~~~~~~~~~~~~v~~~vl~~p~~~~~~~~~~-----~~~~~~~~~ 221 (338)
T 2o7r_A 147 KDSRDEWLTNFADFSNCFIMGESAGGNIAYHAGLRAAAVADELLPLKIKGLVLDEPGFGGSKRTGS-----ELRLANDSR 221 (338)
T ss_dssp HTCCCHHHHHHEEEEEEEEEEETHHHHHHHHHHHHHHTTHHHHTTCCEEEEEEESCCCCCSSCCHH-----HHHTTTCSS
T ss_pred HhCCcchhhccCCcceEEEEEeCccHHHHHHHHHHhccccccCCCCceeEEEEECCccCCCcCChh-----hhccCCCcc
Confidence 9863 2677999999999999999999999888 89999999998876433210 00000000
Q ss_pred CcHHHHHH-HHhc------------CcccCC------CCCCCCCCCCCCCCC-eEEEEecCCCCCCCcHHHHHHHHHHHH
Q 003878 675 EEEEEFYW-LIKY------------SPLHNV------RRPWEQNPDKPFQYP-STLLLTADHDDRVVPLHSLKLLATMQY 734 (789)
Q Consensus 675 ~~~~~~~~-l~~~------------sP~~~v------~~~~~~~~~~~~~~p-p~Li~~g~~D~~V~~~~~~~~~~~L~~ 734 (789)
......+. +..+ +|+... ... ...| |+||++|++|..++ ++.+++++|++
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l--------~~~~~P~Lvi~G~~D~~~~--~~~~~~~~l~~ 291 (338)
T 2o7r_A 222 LPTFVLDLIWELSLPMGADRDHEYCNPTAESEPLYSFDKI--------RSLGWRVMVVGCHGDPMID--RQMELAERLEK 291 (338)
T ss_dssp SCHHHHHHHHHHHSCTTCCTTSTTTCCC----CCTHHHHH--------HHHTCEEEEEEETTSTTHH--HHHHHHHHHHH
T ss_pred cCHHHHHHHHHHhCCCCCCCCCcccCCCCCCcccccHhhh--------cCCCCCEEEEECCCCcchH--HHHHHHHHHHH
Confidence 00000001 1111 111110 000 0134 99999999999887 56889999998
Q ss_pred hhccCCCCCCCCCcEEEEEeCCCCcCCCCc-hhhHHHHHHHHHHHHHHHhCCC
Q 003878 735 VLCTSLENSPQTNPIIGRIERKAGHGVGLP-TQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~-~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
. +.++++++++++||++... ..+..+..+.+.+||.++++..
T Consensus 292 ~----------~~~~~~~~~~g~gH~~~~~~~~~~~~~~~~i~~Fl~~~~~~~ 334 (338)
T 2o7r_A 292 K----------GVDVVAQFDVGGYHAVKLEDPEKAKQFFVILKKFVVDSCTTK 334 (338)
T ss_dssp T----------TCEEEEEEESSCCTTGGGTCHHHHHHHHHHHHHHHC------
T ss_pred C----------CCcEEEEEECCCceEEeccChHHHHHHHHHHHHHHHhhcccc
Confidence 7 8899999999999987432 2233567788999999887643
No 18
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=99.89 E-value=3.9e-22 Score=208.95 Aligned_cols=237 Identities=13% Similarity=0.093 Sum_probs=172.0
Q ss_pred EEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcc
Q 003878 511 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG 590 (789)
Q Consensus 511 ~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~ 590 (789)
..+.+.+| .++.+++..|....++++.|+||++|||................|+++||.|+++|+||.|+...
T Consensus 17 ~~~~~~~g-~~l~~~~~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~------ 89 (276)
T 3hxk_A 17 STFSLNDT-AWVDFYQLQNPRQNENYTFPAIIICPGGGYQHISQRESDPLALAFLAQGYQVLLLNYTVMNKGTN------ 89 (276)
T ss_dssp EECCCBTT-BEEEEECCCC------CCBCEEEEECCSTTTSCCGGGSHHHHHHHHHTTCEEEEEECCCTTSCCC------
T ss_pred ccccCCCC-eEEEEEEeCCcccccCCCCCEEEEEcCCccccCCchhhHHHHHHHHHCCCEEEEecCccCCCcCC------
Confidence 34566788 88887766554332347889999999975343333333334555656999999999999875220
Q ss_pred cccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHh-CCCceeEEEecCCcccccccccccCCcc
Q 003878 591 ALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ-RPDLFGCALAHVGVMDMLRYHKFTIGHA 666 (789)
Q Consensus 591 ~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~-~pd~f~a~v~~~p~~d~~~~~~~~~~~~ 666 (789)
.........|+.+++++|.+.. .+|+++|+++|+|+||.+++.++.+ .+++++++|+.+|++++....... ..
T Consensus 90 -~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~p~~~~~~~~~~~--~~ 166 (276)
T 3hxk_A 90 -YNFLSQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGNSEQIHRPKGVILCYPVTSFTFGWPSD--LS 166 (276)
T ss_dssp -SCTHHHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSSSCSTTCCSEEEEEEECCBTTSSCSSS--SS
T ss_pred -CCcCchHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHhhccCCCccEEEEecCcccHHhhCCcc--hh
Confidence 0111245789999999998864 2688999999999999999999988 788999999999998865543211 11
Q ss_pred chhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCC
Q 003878 667 WVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT 746 (789)
Q Consensus 667 ~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 746 (789)
+ ..+- +... ..++|...+.+. .+|+|++||++|..||+.++.+++++|+.. +
T Consensus 167 ~-~~~~-~~~~------~~~~~~~~~~~~----------~~P~lii~G~~D~~vp~~~~~~~~~~l~~~----------~ 218 (276)
T 3hxk_A 167 H-FNFE-IENI------SEYNISEKVTSS----------TPPTFIWHTADDEGVPIYNSLKYCDRLSKH----------Q 218 (276)
T ss_dssp S-SCCC-CSCC------GGGBTTTTCCTT----------SCCEEEEEETTCSSSCTHHHHHHHHHHHTT----------T
T ss_pred h-hhcC-chhh------hhCChhhccccC----------CCCEEEEecCCCceeChHHHHHHHHHHHHc----------C
Confidence 1 1111 1110 356777777765 789999999999999999999999999987 8
Q ss_pred CcEEEEEeCCCCcCCCCchh-----------hHHHHHHHHHHHHHHHhCC
Q 003878 747 NPIIGRIERKAGHGVGLPTQ-----------KMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 747 ~~~~l~~~~~~gH~~~~~~~-----------~~~~~~~~~~~fl~~~l~~ 785 (789)
.++++++++++||++..... ...++...+.+||.++.+.
T Consensus 219 ~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~wl~~~~~~ 268 (276)
T 3hxk_A 219 VPFEAHFFESGPHGVSLANRTTAPSDAYCLPSVHRWVSWASDWLERQIKN 268 (276)
T ss_dssp CCEEEEEESCCCTTCTTCSTTSCSSSTTCCHHHHTHHHHHHHHHHHHHHT
T ss_pred CCeEEEEECCCCCCccccCccccccccccCchHHHHHHHHHHHHHhCccc
Confidence 89999999999998764222 3456778889999988754
No 19
>3bxp_A Putative lipase/esterase; putative carboxylesterase, structural genomics, joint center structural genomics, JCSG; HET: EPE; 1.70A {Lactobacillus plantarum WCFS1} PDB: 3d3n_A*
Probab=99.89 E-value=1.1e-21 Score=205.50 Aligned_cols=235 Identities=11% Similarity=0.040 Sum_probs=166.6
Q ss_pred cEEEEEEecCCCceEEEEEEEecCC---CCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCC
Q 003878 507 HVHQVFVPSKDGSTKIPMFIVSKKN---IKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 583 (789)
Q Consensus 507 ~~~~~~~~s~dg~~~i~~~l~~p~~---~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g 583 (789)
..+.+.+. .+| .++++.++.|++ ....++.|+||++|||................|+++||.|+++|+||+|+.+
T Consensus 3 ~~~~~~~~-~~~-~~~~~~~~~p~~~~~~~~~~~~p~vv~~HGgg~~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~~~ 80 (277)
T 3bxp_A 3 QVEQRTLN-TAA-HPFQITAYWLDQISDFETAVDYPIMIICPGGGFTYHSGREEAPIATRMMAAGMHTVVLNYQLIVGDQ 80 (277)
T ss_dssp EEEEEEEC-STT-CCEEEEEEEECCCCSSSCCCCEEEEEEECCSTTTSCCCTTHHHHHHHHHHTTCEEEEEECCCSTTTC
T ss_pred ceEEEEec-cCC-CcceEEEEeCCcccccccCCCccEEEEECCCccccCCCccchHHHHHHHHCCCEEEEEecccCCCCC
Confidence 34566664 577 789999999983 1235678999999997543333322223445555599999999999976322
Q ss_pred hhHHhcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC--------------CCceeEE
Q 003878 584 EEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR--------------PDLFGCA 646 (789)
Q Consensus 584 ~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~--------------pd~f~a~ 646 (789)
. ......+|+.+++++|.+.. .+++++|+++|+|+||.+++.++.++ |.+++++
T Consensus 81 ~---------~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 151 (277)
T 3bxp_A 81 S---------VYPWALQQLGATIDWITTQASAHHVDCQRIILAGFSAGGHVVATYNGVATQPELRTRYHLDHYQGQHAAI 151 (277)
T ss_dssp C---------CTTHHHHHHHHHHHHHHHHHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTSHHHHHHTTCTTCCCCCSEE
T ss_pred c---------cCchHHHHHHHHHHHHHhhhhhcCCChhheEEEEeCHHHHHHHHHHhhccCcccccccCcccccCCcCEE
Confidence 1 22356789999999998762 25788999999999999999999885 7789999
Q ss_pred EecCCcccccccccccCCccch-hhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHH
Q 003878 647 LAHVGVMDMLRYHKFTIGHAWV-SDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHS 725 (789)
Q Consensus 647 v~~~p~~d~~~~~~~~~~~~~~-~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~ 725 (789)
|+.+|+.++..... ....+. ..++ .+..++|...+... .+|+|++||++|..||+.++
T Consensus 152 v~~~p~~~~~~~~~--~~~~~~~~~~~---------~~~~~~~~~~~~~~----------~~P~lii~G~~D~~vp~~~~ 210 (277)
T 3bxp_A 152 ILGYPVIDLTAGFP--TTSAARNQITT---------DARLWAAQRLVTPA----------SKPAFVWQTATDESVPPINS 210 (277)
T ss_dssp EEESCCCBTTSSSS--SSHHHHHHHCS---------CGGGSBGGGGCCTT----------SCCEEEEECTTCCCSCTHHH
T ss_pred EEeCCcccCCCCCC--Cccccchhccc---------hhhhcCHhhccccC----------CCCEEEEeeCCCCccChHHH
Confidence 99999987543211 000111 0011 12345677666664 78999999999999999999
Q ss_pred HHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCch-------------hhHHHHHHHHHHHHHHHh
Q 003878 726 LKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT-------------QKMIDEAADRYGFMAKML 783 (789)
Q Consensus 726 ~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~-------------~~~~~~~~~~~~fl~~~l 783 (789)
.+++++|++. +.++++++++++||++.... ....++...+.+||.++.
T Consensus 211 ~~~~~~l~~~----------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~ 271 (277)
T 3bxp_A 211 LKYVQAMLQH----------QVATAYHLFGSGIHGLALANHVTQKPGKDKYLNDQAAIWPQLALRWLQEQG 271 (277)
T ss_dssp HHHHHHHHHT----------TCCEEEEECCCC----------------CHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHC----------CCeEEEEEeCCCCcccccccccccCccccccccchHHHHHHHHHHHHHhcc
Confidence 9999999987 88999999999999764332 223567888999998764
No 20
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga maritima} PDB: 3doi_A
Probab=99.87 E-value=3e-21 Score=212.79 Aligned_cols=221 Identities=15% Similarity=0.131 Sum_probs=173.0
Q ss_pred cEEEEEEecC-CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCC--------CCH-HHHHHHHcCCeEEEEEee
Q 003878 507 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPS--------FSV-SRTILMRHLGAVFCIANI 576 (789)
Q Consensus 507 ~~~~~~~~s~-dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~--------~~~-~~~~~l~~~G~~v~~~~~ 576 (789)
..+.+.+.+. || .++++.++.|++..+.++.|+||++||+.+...... +.. ....+....|+.++.+++
T Consensus 143 ~~~~~~~~~~~dg-~~l~~~v~~P~~~~~~~~~Pvvv~lHG~g~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~vv~pd~ 221 (380)
T 3doh_A 143 DFLAFTFKDPETG-VEIPYRLFVPKDVNPDRKYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQC 221 (380)
T ss_dssp GEEEEEEECTTTC-CEEEEEEECCSSCCTTSCEEEEEEECCGGGCSSSSSHHHHSSTTTTGGGSHHHHTTSCCEEEEECC
T ss_pred cccceeeccCCCC-cEEEEEEEcCCCCCCCCCccEEEEECCCCCCCCchhhhhhccccceeecCccccccCCEEEEEecC
Confidence 3577888998 99 999999999998666788999999999875533211 110 012233357889999999
Q ss_pred cCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccc
Q 003878 577 RGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDML 656 (789)
Q Consensus 577 RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~ 656 (789)
||++++|..|...+........+.|+.+++++++++..+|++||+++|+|+||++++.++.++|++|+++|+.+|..+.
T Consensus 222 ~g~~~~~~~~~~~~~~~~~~~~~~d~~~~i~~~~~~~~~d~~ri~l~G~S~GG~~a~~~a~~~p~~~~~~v~~sg~~~~- 300 (380)
T 3doh_A 222 PPNSSWSTLFTDRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAIPICGGGDV- 300 (380)
T ss_dssp CTTCCSBTTTTCSSCTTSBCHHHHHHHHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCG-
T ss_pred CCCCcccccccccccccCCcchHHHHHHHHHHHHHhcCCCcCcEEEEEECccHHHHHHHHHhCCccceEEEEecCCCCh-
Confidence 9999999888876555566778899999999999987789999999999999999999999999999999999987421
Q ss_pred ccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhh
Q 003878 657 RYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVL 736 (789)
Q Consensus 657 ~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 736 (789)
..+... ..+|+|++||++|..||+.++.+++++|++.
T Consensus 301 ---------------------------------~~~~~~---------~~~P~lii~G~~D~~vp~~~~~~~~~~l~~~- 337 (380)
T 3doh_A 301 ---------------------------------SKVERI---------KDIPIWVFHAEDDPVVPVENSRVLVKKLAEI- 337 (380)
T ss_dssp ---------------------------------GGGGGG---------TTSCEEEEEETTCSSSCTHHHHHHHHHHHHT-
T ss_pred ---------------------------------hhhhhc---------cCCCEEEEecCCCCccCHHHHHHHHHHHHHC-
Confidence 011111 2379999999999999999999999999988
Q ss_pred ccCCCCCCCCCcEEEEEeCCC---CcCCCCchhhHHHHHH--HHHHHHHHH
Q 003878 737 CTSLENSPQTNPIIGRIERKA---GHGVGLPTQKMIDEAA--DRYGFMAKM 782 (789)
Q Consensus 737 ~~~~~~~~~~~~~~l~~~~~~---gH~~~~~~~~~~~~~~--~~~~fl~~~ 782 (789)
|.++++.+++++ +|++..... ....+. .+++||.++
T Consensus 338 ---------g~~~~~~~~~~~~h~~h~~~~H~~-~~~~~~~~~i~~wL~~~ 378 (380)
T 3doh_A 338 ---------GGKVRYTEYEKGFMEKHGWDPHGS-WIPTYENQEAIEWLFEQ 378 (380)
T ss_dssp ---------TCCEEEEEECTTHHHHTTCCTTCT-HHHHHTCHHHHHHHHTC
T ss_pred ---------CCceEEEEecCCcccCCCCCCchh-HHHhcCCHHHHHHHHhh
Confidence 889999999999 443332211 223344 788999765
No 21
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=99.87 E-value=2.2e-21 Score=201.99 Aligned_cols=215 Identities=16% Similarity=0.109 Sum_probs=139.8
Q ss_pred EEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHH
Q 003878 508 VHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWH 587 (789)
Q Consensus 508 ~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~ 587 (789)
.|+......|| .+||++++.|++ .++.|+||++||+.+....+.+.. ..+.|+++||+|+.+|+||+|+.+....
T Consensus 30 ~e~~~~~~~dG-~~i~g~l~~P~~---~~~~p~Vl~~HG~g~~~~~~~~~~-~a~~la~~Gy~Vl~~D~rG~G~s~~~~~ 104 (259)
T 4ao6_A 30 QERGFSLEVDG-RTVPGVYWSPAE---GSSDRLVLLGHGGTTHKKVEYIEQ-VAKLLVGRGISAMAIDGPGHGERASVQA 104 (259)
T ss_dssp EEEEEEEEETT-EEEEEEEEEESS---SCCSEEEEEEC--------CHHHH-HHHHHHHTTEEEEEECCCC---------
T ss_pred eEEEEEEeeCC-eEEEEEEEeCCC---CCCCCEEEEeCCCcccccchHHHH-HHHHHHHCCCeEEeeccCCCCCCCCccc
Confidence 34444445799 999999999987 356799999999987655555543 3556666999999999999987654432
Q ss_pred hcccccC---------------CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 588 KGGALAK---------------KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 588 ~~~~~~~---------------~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
....... ....+.|..+++++|... +|+++|+++|+|+||.+++.++...|+ ++|+|+..+.
T Consensus 105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~l~~l~~~--~d~~rv~~~G~S~GG~~a~~~a~~~pr-i~Aav~~~~~ 181 (259)
T 4ao6_A 105 GREPTDVVGLDAFPRMWHEGGGTAAVIADWAAALDFIEAE--EGPRPTGWWGLSMGTMMGLPVTASDKR-IKVALLGLMG 181 (259)
T ss_dssp ----CCGGGSTTHHHHHHHTTHHHHHHHHHHHHHHHHHHH--HCCCCEEEEECTHHHHHHHHHHHHCTT-EEEEEEESCC
T ss_pred ccccchhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHhhhc--cCCceEEEEeechhHHHHHHHHhcCCc-eEEEEEeccc
Confidence 2211110 012245778888888654 688999999999999999999999886 5555544332
Q ss_pred ccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHH
Q 003878 653 MDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATM 732 (789)
Q Consensus 653 ~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L 732 (789)
.+.. .. .++...+.++ ..|+|++||++|.+||++++.+++++|
T Consensus 182 ~~~~-------------------~~--------~~~~~~a~~i----------~~P~Li~hG~~D~~vp~~~~~~l~~al 224 (259)
T 4ao6_A 182 VEGV-------------------NG--------EDLVRLAPQV----------TCPVRYLLQWDDELVSLQSGLELFGKL 224 (259)
T ss_dssp TTST-------------------TH--------HHHHHHGGGC----------CSCEEEEEETTCSSSCHHHHHHHHHHC
T ss_pred cccc-------------------cc--------cchhhhhccC----------CCCEEEEecCCCCCCCHHHHHHHHHHh
Confidence 2100 00 0122233444 679999999999999999999999988
Q ss_pred HHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 733 QYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
. +....++++++ +|... +. .+..+.+++||+++|+
T Consensus 225 ~------------~~~k~l~~~~G-~H~~~-p~---~e~~~~~~~fl~~hLk 259 (259)
T 4ao6_A 225 G------------TKQKTLHVNPG-KHSAV-PT---WEMFAGTVDYLDQRLK 259 (259)
T ss_dssp C------------CSSEEEEEESS-CTTCC-CH---HHHTHHHHHHHHHHCC
T ss_pred C------------CCCeEEEEeCC-CCCCc-CH---HHHHHHHHHHHHHhcC
Confidence 5 33567888876 66543 22 3556788999999986
No 22
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=99.87 E-value=2.4e-21 Score=206.40 Aligned_cols=243 Identities=15% Similarity=0.117 Sum_probs=172.6
Q ss_pred CCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCc-cCCCCCCHHHHHHHHcCCeEEEEEeecCCCCC
Q 003878 504 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNI-SVTPSFSVSRTILMRHLGAVFCIANIRGGGEY 582 (789)
Q Consensus 504 ~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 582 (789)
..+..+.+.+++.|| .+|+++++.|++ .++.|+||++||+.+. ... +. ....++. +||.|+++|+||.|+.
T Consensus 52 ~~~~~~~~~~~~~~g-~~i~~~~~~P~~---~~~~p~vv~~HG~~~~~~~~--~~-~~~~l~~-~g~~v~~~d~rg~g~s 123 (318)
T 1l7a_A 52 DGVKVYRLTYKSFGN-ARITGWYAVPDK---EGPHPAIVKYHGYNASYDGE--IH-EMVNWAL-HGYATFGMLVRGQQRS 123 (318)
T ss_dssp SSEEEEEEEEEEGGG-EEEEEEEEEESS---CSCEEEEEEECCTTCCSGGG--HH-HHHHHHH-TTCEEEEECCTTTSSS
T ss_pred CCeEEEEEEEEccCC-CEEEEEEEeeCC---CCCccEEEEEcCCCCCCCCC--cc-cccchhh-CCcEEEEecCCCCCCC
Confidence 345678899999999 999999999986 4678999999998765 322 22 2334454 8999999999999887
Q ss_pred ChhHHhcccccC--------------CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEe
Q 003878 583 GEEWHKGGALAK--------------KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALA 648 (789)
Q Consensus 583 g~~~~~~~~~~~--------------~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~ 648 (789)
+..+...+.... ....++|+.+++++|.++..+|+++|+++|+|+||.+++.++.++|+ ++++|+
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~~~-~~~~v~ 202 (318)
T 1l7a_A 124 EDTSISPHGHALGWMTKGILDKDTYYYRGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAAALSDI-PKAAVA 202 (318)
T ss_dssp CCCCCCSSCCSSSSTTTTTTCTTTCHHHHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHCSC-CSEEEE
T ss_pred CCcccccCCccccceeccCCCHHHHHHHHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHhccCCC-ccEEEe
Confidence 654321111000 02347999999999999988899999999999999999999999887 566677
Q ss_pred cCCccccc-ccccccCCcc------chhhcCCC-CcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 003878 649 HVGVMDML-RYHKFTIGHA------WVSDFGCS-EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRV 720 (789)
Q Consensus 649 ~~p~~d~~-~~~~~~~~~~------~~~e~g~p-~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V 720 (789)
.+|+++.. .......... +...++.+ ...+.+..+..++|...+.++ .+|+|+++|.+|..|
T Consensus 203 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~P~li~~g~~D~~~ 272 (318)
T 1l7a_A 203 DYPYLSNFERAIDVALEQPYLEINSFFRRNGSPETEVQAMKTLSYFDIMNLADRV----------KVPVLMSIGLIDKVT 272 (318)
T ss_dssp ESCCSCCHHHHHHHCCSTTTTHHHHHHHHSCCHHHHHHHHHHHHTTCHHHHGGGC----------CSCEEEEEETTCSSS
T ss_pred cCCcccCHHHHHhcCCcCccHHHHHHHhccCCcccHHHHHHhhccccHHHHHhhC----------CCCEEEEeccCCCCC
Confidence 88865422 1111110001 11111212 122333444555666666665 689999999999999
Q ss_pred CcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 721 VPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 721 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
|+.++.++++++. .++++.+++++||... .+....+.+||.++|+
T Consensus 273 ~~~~~~~~~~~l~-------------~~~~~~~~~~~~H~~~------~~~~~~~~~fl~~~l~ 317 (318)
T 1l7a_A 273 PPSTVFAAYNHLE-------------TKKELKVYRYFGHEYI------PAFQTEKLAFFKQILK 317 (318)
T ss_dssp CHHHHHHHHHHCC-------------SSEEEEEETTCCSSCC------HHHHHHHHHHHHHHHC
T ss_pred CcccHHHHHhhcC-------------CCeeEEEccCCCCCCc------chhHHHHHHHHHHHhC
Confidence 9999988887664 2478999999999932 2456788999999886
No 23
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=99.87 E-value=3.4e-21 Score=196.87 Aligned_cols=225 Identities=15% Similarity=0.139 Sum_probs=163.2
Q ss_pred CCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCCh
Q 003878 505 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE 584 (789)
Q Consensus 505 ~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~ 584 (789)
.+..+.+.+++ +| .+++++++.|++. .++.|+||++||..+.. ..+. .....|+++||.|+++|+||.|+...
T Consensus 3 ~~~~~~~~~~~-~~-~~~~~~~~~p~~~--~~~~p~vv~~HG~~g~~--~~~~-~~~~~l~~~G~~v~~~d~~g~g~~~~ 75 (241)
T 3f67_A 3 AIIAGETSIPS-QG-ENMPAYHARPKNA--DGPLPIVIVVQEIFGVH--EHIR-DLCRRLAQEGYLAIAPELYFRQGDPN 75 (241)
T ss_dssp CEEEEEEEEEE-TT-EEEEEEEEEETTC--CSCEEEEEEECCTTCSC--HHHH-HHHHHHHHTTCEEEEECTTTTTCCGG
T ss_pred cceeeeEEEec-CC-cceEEEEecCCCC--CCCCCEEEEEcCcCccC--HHHH-HHHHHHHHCCcEEEEecccccCCCCC
Confidence 45677888888 88 9999999999863 36789999999966543 2222 33455556999999999998765433
Q ss_pred hHHhcc-------cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccc
Q 003878 585 EWHKGG-------ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR 657 (789)
Q Consensus 585 ~~~~~~-------~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~ 657 (789)
.+.... .........+|+.+++++|.+++ .|+++|+++|+|+||.+++.++.++|+ ++++|+..+.....
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~-~d~~~i~l~G~S~Gg~~a~~~a~~~~~-~~~~v~~~~~~~~~- 152 (241)
T 3f67_A 76 EYHDIPTLFKELVSKVPDAQVLADLDHVASWAARHG-GDAHRLLITGFCWGGRITWLYAAHNPQ-LKAAVAWYGKLVGE- 152 (241)
T ss_dssp GCCSHHHHHHHTGGGSCHHHHHHHHHHHHHHHHTTT-EEEEEEEEEEETHHHHHHHHHHTTCTT-CCEEEEESCCCSCC-
T ss_pred chhhHHHHHHHhhhcCCchhhHHHHHHHHHHHHhcc-CCCCeEEEEEEcccHHHHHHHHhhCcC-cceEEEEeccccCC-
Confidence 221110 01111245789999999999987 789999999999999999999999998 56666655432110
Q ss_pred cccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhc
Q 003878 658 YHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 737 (789)
Q Consensus 658 ~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~ 737 (789)
. ..+ ...+|...+.+. .+|+|+++|++|..||+.++.+++++|++.
T Consensus 153 ------~----~~~------------~~~~~~~~~~~~----------~~P~l~~~g~~D~~~~~~~~~~~~~~l~~~-- 198 (241)
T 3f67_A 153 ------K----SLN------------SPKHPVDIAVDL----------NAPVLGLYGAKDASIPQDTVETMRQALRAA-- 198 (241)
T ss_dssp ------C----CSS------------SCCCHHHHGGGC----------CSCEEEEEETTCTTSCHHHHHHHHHHHHHT--
T ss_pred ------C----ccC------------CccCHHHhhhhc----------CCCEEEEEecCCCCCCHHHHHHHHHHHHHc--
Confidence 0 000 112333334444 679999999999999999999999999987
Q ss_pred cCCCCCCCCCcEEEEEeCCCCcCCCCc------hhhHHHHHHHHHHHHHH
Q 003878 738 TSLENSPQTNPIIGRIERKAGHGVGLP------TQKMIDEAADRYGFMAK 781 (789)
Q Consensus 738 ~~~~~~~~~~~~~l~~~~~~gH~~~~~------~~~~~~~~~~~~~fl~~ 781 (789)
+.++++.+++++||++... .....+....+.+||.+
T Consensus 199 --------~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~fl~~ 240 (241)
T 3f67_A 199 --------NATAEIVVYPEADHAFNADYRASYHEESAKDGWQRMLAWFAQ 240 (241)
T ss_dssp --------TCSEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHTT
T ss_pred --------CCCcEEEEECCCCcceecCCCCCCCHHHHHHHHHHHHHHHhh
Confidence 7899999999999998532 22234566778888864
No 24
>3ebl_A Gibberellin receptor GID1; alpha/beta hydrolase, lipase, gibberellin signaling pathway, hydrolase, nucleus, hydrolase receptor; HET: GA4; 1.90A {Oryza sativa subsp} PDB: 3ed1_A*
Probab=99.87 E-value=2.1e-20 Score=204.79 Aligned_cols=246 Identities=14% Similarity=0.123 Sum_probs=166.3
Q ss_pred CCCcEEEEEEecCCCceEEEEEEEe-cCCC--------------------CCCCCccEEEEEcCCCCccCCCC---CCHH
Q 003878 504 SEFHVHQVFVPSKDGSTKIPMFIVS-KKNI--------------------KLDGSHPCLLYGYGGFNISVTPS---FSVS 559 (789)
Q Consensus 504 ~~~~~~~~~~~s~dg~~~i~~~l~~-p~~~--------------------~~~~~~P~ll~~hGg~~~~~~~~---~~~~ 559 (789)
..+..+.+.+.+.+| +.+.++. |++. ...++.|+||++|||........ |...
T Consensus 60 ~~v~~~dv~~~~~~g---l~~~~~~~P~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Pvvv~~HGGg~~~g~~~~~~~~~~ 136 (365)
T 3ebl_A 60 EGVSSFDHIIDQSVG---LEVRIYRAAAEGDAEEGAAAVTRPILEFLTDAPAAEPFPVIIFFHGGSFVHSSASSTIYDSL 136 (365)
T ss_dssp TTEEEEEEEEETTTT---EEEEEEEEC----------------CGGGGSCCBSSCCEEEEEECCSTTTSCCTTBHHHHHH
T ss_pred CCCceeeEEecCCCC---ceEEEEeCCCccccccccccccccccccccCCCCCCcceEEEEEcCCccccCCCchhhHHHH
Confidence 345678899998888 5555665 7652 23467899999999865433332 3333
Q ss_pred HHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcC----CCCCC-cEEEEeeChHHHHHHH
Q 003878 560 RTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG----YTQSR-KLCIEGGSNGGLLVGA 634 (789)
Q Consensus 560 ~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~----~~d~~-~i~i~G~S~GG~l~~~ 634 (789)
...+..+.|++|+.+|||++++.. ....++|+.++++||.++. .+|++ ||+|+|+|+||.+++.
T Consensus 137 ~~~la~~~g~~Vv~~dyR~~p~~~-----------~~~~~~D~~~a~~~l~~~~~~~~~~d~~~ri~l~G~S~GG~la~~ 205 (365)
T 3ebl_A 137 CRRFVKLSKGVVVSVNYRRAPEHR-----------YPCAYDDGWTALKWVMSQPFMRSGGDAQARVFLSGDSSGGNIAHH 205 (365)
T ss_dssp HHHHHHHHTSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHHCTTTEETTTTEEEEEEEEETHHHHHHHH
T ss_pred HHHHHHHCCCEEEEeeCCCCCCCC-----------CcHHHHHHHHHHHHHHhCchhhhCCCCCCcEEEEeeCccHHHHHH
Confidence 344445349999999999877532 2345799999999999765 57999 9999999999999999
Q ss_pred HHHhCCC---ceeEEEecCCcccccccccccCCccchhhcCCC-CcHHHHHHH-H------------hcCccc-CCCCCC
Q 003878 635 CINQRPD---LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCS-EEEEEFYWL-I------------KYSPLH-NVRRPW 696 (789)
Q Consensus 635 ~~~~~pd---~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p-~~~~~~~~l-~------------~~sP~~-~v~~~~ 696 (789)
++.+.++ .++++|+.+|+++........ ......+ ......+++ . ..+|+. .....
T Consensus 206 ~a~~~~~~~~~~~g~vl~~p~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l- 279 (365)
T 3ebl_A 206 VAVRAADEGVKVCGNILLNAMFGGTERTESE-----RRLDGKYFVTLQDRDWYWKAYLPEDADRDHPACNPFGPNGRRL- 279 (365)
T ss_dssp HHHHHHHTTCCCCEEEEESCCCCCSSCCHHH-----HHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTCCCC-
T ss_pred HHHHHHhcCCceeeEEEEccccCCCcCChhh-----hhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCcchhh-
Confidence 9987766 799999999998864332100 0000000 001111111 1 112332 11111
Q ss_pred CCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCC--chhhHHHHHHH
Q 003878 697 EQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL--PTQKMIDEAAD 774 (789)
Q Consensus 697 ~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~--~~~~~~~~~~~ 774 (789)
.....||+||+||++|..+ .++.+++++|++. |.+++++++++++|++.. ...+..+.++.
T Consensus 280 -----~~~~~pP~Li~~G~~D~l~--~~~~~~~~~L~~~----------g~~v~l~~~~g~~H~f~~~~~~~~~~~~~~~ 342 (365)
T 3ebl_A 280 -----GGLPFAKSLIIVSGLDLTC--DRQLAYADALRED----------GHHVKVVQCENATVGFYLLPNTVHYHEVMEE 342 (365)
T ss_dssp -----TTSCCCCEEEEEETTSTTH--HHHHHHHHHHHHT----------TCCEEEEEETTCCTTGGGSSCSHHHHHHHHH
T ss_pred -----ccCCCCCEEEEEcCcccch--hHHHHHHHHHHHC----------CCCEEEEEECCCcEEEeccCCCHHHHHHHHH
Confidence 0003589999999999654 4678999999988 899999999999998752 12334678889
Q ss_pred HHHHHHHHhCCC
Q 003878 775 RYGFMAKMLGAS 786 (789)
Q Consensus 775 ~~~fl~~~l~~~ 786 (789)
+.+||.++++.+
T Consensus 343 i~~Fl~~~~~~~ 354 (365)
T 3ebl_A 343 ISDFLNANLYYG 354 (365)
T ss_dssp HHHHHHHHCC--
T ss_pred HHHHHHHhhhcc
Confidence 999999998754
No 25
>3qh4_A Esterase LIPW; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, tuberculosis, O LIPW, heroin esterase; 1.75A {Mycobacterium marinum}
Probab=99.86 E-value=5.5e-21 Score=205.29 Aligned_cols=236 Identities=17% Similarity=0.107 Sum_probs=171.8
Q ss_pred CCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCc-cCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCC
Q 003878 505 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNI-SVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 583 (789)
Q Consensus 505 ~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g 583 (789)
.+..+.+.+++.|| .+|+++++.|++ ++.|+||++|||... .....+......+..+.|++|+.+|||++++..
T Consensus 57 ~~~~~~~~i~~~~G-~~i~~~~~~P~~----~~~p~vv~~HGgG~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~ 131 (317)
T 3qh4_A 57 GVAVADDVVTGEAG-RPVPVRIYRAAP----TPAPVVVYCHAGGFALGNLDTDHRQCLELARRARCAVVSVDYRLAPEHP 131 (317)
T ss_dssp CCEEEEEEEECTTS-CEEEEEEEECSC----SSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTSC
T ss_pred cceEEEEEecCCCC-CeEEEEEEecCC----CCCcEEEEECCCcCccCChHHHHHHHHHHHHHcCCEEEEecCCCCCCCC
Confidence 46678899999999 999999999986 578999999997533 333445555556665579999999999887642
Q ss_pred hhHHhcccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhCCC----ceeEEEecCCccccc
Q 003878 584 EEWHKGGALAKKQNCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQRPD----LFGCALAHVGVMDML 656 (789)
Q Consensus 584 ~~~~~~~~~~~~~~~~~D~~~~~~~L~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~pd----~f~a~v~~~p~~d~~ 656 (789)
....++|+.++++|+.++ -.+|++||+|+|+|+||.+++.++.+.|+ .++++++.+|++|..
T Consensus 132 -----------~p~~~~D~~~a~~~l~~~~~~~~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~ 200 (317)
T 3qh4_A 132 -----------YPAALHDAIEVLTWVVGNATRLGFDARRLAVAGSSAGATLAAGLAHGAADGSLPPVIFQLLHQPVLDDR 200 (317)
T ss_dssp -----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTSSCCCCEEEEESCCCCSS
T ss_pred -----------CchHHHHHHHHHHHHHhhHHhhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCeeEEEEECceecCC
Confidence 245678999999999985 34689999999999999999999987665 489999999999875
Q ss_pred ccccccCCccchhhcCC-C-CcHHH----HHHHH-------hcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcH
Q 003878 657 RYHKFTIGHAWVSDFGC-S-EEEEE----FYWLI-------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPL 723 (789)
Q Consensus 657 ~~~~~~~~~~~~~e~g~-p-~~~~~----~~~l~-------~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~ 723 (789)
.... ..++.. + ..... +..+. ..+|.....- ...||+||+||+.|..++
T Consensus 201 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l---------~~lpP~li~~G~~D~~~~-- 262 (317)
T 3qh4_A 201 PTAS-------RSEFRATPAFDGEAASLMWRHYLAGQTPSPESVPGRRGQL---------AGLPATLITCGEIDPFRD-- 262 (317)
T ss_dssp CCHH-------HHHTTTCSSSCHHHHHHHHHHHHTTCCCCTTTCGGGCSCC---------TTCCCEEEEEEEESTTHH--
T ss_pred CCcC-------HHHhcCCCCcCHHHHHHHHHHhcCCCCCCcccCCCccccc---------CCCCceeEEecCcCCCch--
Confidence 2110 011110 1 11111 11111 1123222111 135899999999999875
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCC---chhhHHHHHHHHHHHHHHHhC
Q 003878 724 HSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL---PTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 724 ~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~---~~~~~~~~~~~~~~fl~~~l~ 784 (789)
++.+++++|++. |.+++++++++++|++.. ......+..+.+.+||.++|+
T Consensus 263 ~~~~~a~~l~~~----------g~~~~l~~~~g~~H~f~~~~~~~~~~~~~~~~~~~~l~~~l~ 316 (317)
T 3qh4_A 263 EVLDYAQRLLGA----------GVSTELHIFPRACHGFDSLLPEWTTSQRLFAMQGHALADAFY 316 (317)
T ss_dssp HHHHHHHHHHHT----------TCCEEEEEEEEEETTHHHHCTTSHHHHHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHc----------CCCEEEEEeCCCccchhhhcCCchHHHHHHHHHHHHHHHHhC
Confidence 889999999988 899999999999998532 223345778889999999875
No 26
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=99.86 E-value=3.3e-21 Score=202.89 Aligned_cols=233 Identities=12% Similarity=0.009 Sum_probs=167.4
Q ss_pred EEEEEEecCCCceEEEEEEEecCCC---CCCCCccEEEEEcCCCCccCC-CCCCHHHHHHHHcCCeEEEEEeecCCCCCC
Q 003878 508 VHQVFVPSKDGSTKIPMFIVSKKNI---KLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGEYG 583 (789)
Q Consensus 508 ~~~~~~~s~dg~~~i~~~l~~p~~~---~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g 583 (789)
.+.+.+...+| .++++.++ |+.. ...++.|+||++|||...... ..|. .+...|+++||.|+++|+||.++.+
T Consensus 19 ~~~v~~~~~~g-~~~~~~~y-p~~~~~~~~~~~~p~vv~lHGgg~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g~~~~~ 95 (283)
T 3bjr_A 19 GMQVIKQKLTA-TCAQLTGY-LHQPDTNAHQTNLPAIIIVPGGSYTHIPVAQAE-SLAMAFAGHGYQAFYLEYTLLTDQQ 95 (283)
T ss_dssp SSEEEEEECTT-SSCEEEEE-EC--------CCEEEEEEECCSTTTCCCHHHHH-HHHHHHHTTTCEEEEEECCCTTTCS
T ss_pred CcceEEeecCC-CceeEEEe-cCCccccccCCCCcEEEEECCCccccCCccccH-HHHHHHHhCCcEEEEEeccCCCccc
Confidence 45677888899 88999988 7652 135688999999997532222 2232 2345566699999999999977642
Q ss_pred hhHHhcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCCCc-------------eeEEE
Q 003878 584 EEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPDL-------------FGCAL 647 (789)
Q Consensus 584 ~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~pd~-------------f~a~v 647 (789)
........|+.+++++|.+.. .+|+++|+++|+|+||.+++.++.++|+. ++++|
T Consensus 96 ---------~~~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~v 166 (283)
T 3bjr_A 96 ---------PLGLAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWATRVATELNVTPAMLKPNNVV 166 (283)
T ss_dssp ---------SCBTHHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTTHHHHHHTCCHHHHCCSSEE
T ss_pred ---------cCchhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccccchhhcCCCcCCCCccEEE
Confidence 122345689999999998763 36888999999999999999999999987 89999
Q ss_pred ecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHH
Q 003878 648 AHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLK 727 (789)
Q Consensus 648 ~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~ 727 (789)
+.+|+.++........ ..+...++ .+..++|...+.+. .+|+|+++|++|..||+.++.+
T Consensus 167 ~~~p~~~~~~~~~~~~-~~~~~~~~---------~~~~~~~~~~~~~~----------~~P~lii~G~~D~~~p~~~~~~ 226 (283)
T 3bjr_A 167 LGYPVISPLLGFPKDD-ATLATWTP---------TPNELAADQHVNSD----------NQPTFIWTTADDPIVPATNTLA 226 (283)
T ss_dssp EESCCCCTTSBC---------CCCC---------CGGGGCGGGSCCTT----------CCCEEEEEESCCTTSCTHHHHH
T ss_pred EcCCcccccccccccc-chHHHHHH---------HhHhcCHHHhccCC----------CCCEEEEEcCCCCCCChHHHHH
Confidence 9999887543221100 00101111 12345677666665 7899999999999999999999
Q ss_pred HHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchh-----------hHHHHHHHHHHHHHHH
Q 003878 728 LLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQ-----------KMIDEAADRYGFMAKM 782 (789)
Q Consensus 728 ~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~-----------~~~~~~~~~~~fl~~~ 782 (789)
++++|+.. +.++++++++++||++..... ...++...+.+||.++
T Consensus 227 ~~~~l~~~----------g~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~i~~fl~~~ 282 (283)
T 3bjr_A 227 YATALATA----------KIPYELHVFKHGPHGLALANAQTAWKPDANQPHVAHWLTLALEWLADN 282 (283)
T ss_dssp HHHHHHHT----------TCCEEEEEECCCSHHHHHHHHHHSCC-------CCHHHHHHHHHHHHT
T ss_pred HHHHHHHC----------CCCeEEEEeCCCCcccccccccccccccccchhHHHHHHHHHHHHhhc
Confidence 99999987 889999999999997643321 1235677888898753
No 27
>3fak_A Esterase/lipase, ESTE5; HSL, hydrolase; 1.90A {Uncultured bacterium} PDB: 3g9t_A 3g9u_A 3g9z_A 3h17_A* 3h18_A* 3h19_A 3h1a_A 3h1b_A 3l1h_A 3l1i_A 3l1j_A 3v9a_A
Probab=99.86 E-value=8e-21 Score=204.44 Aligned_cols=229 Identities=17% Similarity=0.015 Sum_probs=159.6
Q ss_pred EEEEEEEecCCCCCCCCccEEEEEcCCCCccCCC-CCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchH
Q 003878 521 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-SFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCF 599 (789)
Q Consensus 521 ~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~ 599 (789)
.|+++++.|++ .++.|+||++|||....... .+......+....|++|+.+|||++++.. ....+
T Consensus 66 ~i~~~~~~p~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~vv~~dyr~~p~~~-----------~~~~~ 131 (322)
T 3fak_A 66 GCAAEWVRAPG---CQAGKAILYLHGGGYVMGSINTHRSMVGEISRASQAAALLLDYRLAPEHP-----------FPAAV 131 (322)
T ss_dssp TEEEEEEECTT---CCTTCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTSEEEEECCCCTTTSC-----------TTHHH
T ss_pred CeEEEEEeCCC---CCCccEEEEEcCCccccCChHHHHHHHHHHHHhcCCEEEEEeCCCCCCCC-----------CCcHH
Confidence 38889999976 35789999999986443332 22233344444469999999999877542 34467
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCc----eeEEEecCCcccccccccccCCccchhhcCCCC
Q 003878 600 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSE 675 (789)
Q Consensus 600 ~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~----f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~ 675 (789)
+|+.++++||.++ .+|++||+|+|+|+||.+++.++.+.|+. ++++|+.+|++|+...............+-...
T Consensus 132 ~D~~~a~~~l~~~-~~d~~ri~l~G~S~GG~lA~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~~~~~~~~~~~~~~~~~~ 210 (322)
T 3fak_A 132 EDGVAAYRWLLDQ-GFKPQHLSISGDSAGGGLVLAVLVSARDQGLPMPASAIPISPWADMTCTNDSFKTRAEADPMVAPG 210 (322)
T ss_dssp HHHHHHHHHHHHH-TCCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTHHHHTTTTCCSCCSS
T ss_pred HHHHHHHHHHHHc-CCCCceEEEEEcCcCHHHHHHHHHHHHhcCCCCceEEEEECCEecCcCCCcCHHHhCccCcccCHH
Confidence 9999999999998 56999999999999999999999887664 999999999998754321000000000000000
Q ss_pred cHHH-HHHH--------HhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCC
Q 003878 676 EEEE-FYWL--------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT 746 (789)
Q Consensus 676 ~~~~-~~~l--------~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 746 (789)
.... ...+ ...+|+...-. ..||+||+||+.|.. ..++.+++++|++. |
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~sp~~~~~~----------~~pP~li~~g~~D~~--~~~~~~~~~~l~~~----------g 268 (322)
T 3fak_A 211 GINKMAARYLNGADAKHPYASPNFANLK----------GLPPLLIHVGRDEVL--LDDSIKLDAKAKAD----------G 268 (322)
T ss_dssp HHHHHHHHHHTTSCTTCTTTCGGGSCCT----------TCCCEEEEEETTSTT--HHHHHHHHHHHHHT----------T
T ss_pred HHHHHHHHhcCCCCCCCcccCCCccccc----------CCChHhEEEcCcCcc--HHHHHHHHHHHHHc----------C
Confidence 0000 0001 12355533222 368999999999987 46889999999998 9
Q ss_pred CcEEEEEeCCCCcCCCCc---hhhHHHHHHHHHHHHHHHhCCC
Q 003878 747 NPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 747 ~~~~l~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
.+++++++++++|++... ..+..+..+.+.+||.++|+..
T Consensus 269 ~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3fak_A 269 VKSTLEIWDDMIHVWHAFHPMLPEGKQAIVRVGEFMREQWAAL 311 (322)
T ss_dssp CCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC-
T ss_pred CCEEEEEeCCceeehhhccCCCHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999987521 2234577889999999998654
No 28
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=99.85 E-value=9.3e-21 Score=221.41 Aligned_cols=253 Identities=13% Similarity=0.078 Sum_probs=179.4
Q ss_pred CCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCcc----CC-CCCCHHHH---HHHHcCCeEEEEEe
Q 003878 504 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS----VT-PSFSVSRT---ILMRHLGAVFCIAN 575 (789)
Q Consensus 504 ~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~----~~-~~~~~~~~---~~l~~~G~~v~~~~ 575 (789)
..+..+.+.+++.|| .+|.++++.|++. ++.|+||+.||..+.. .. ..|..... ++|+++||+|+.+|
T Consensus 21 ~~~~~~~v~i~~~DG-~~L~~~~~~P~~~---~~~P~vl~~hgyg~~~~~~~~~~~~~~~~~~~~~~~la~~Gy~Vv~~D 96 (615)
T 1mpx_A 21 NDYIKREVMIPMRDG-VKLHTVIVLPKGA---KNAPIVLTRTPYDASGRTERLASPHMKDLLSAGDDVFVEGGYIRVFQD 96 (615)
T ss_dssp CSEEEEEEEEECTTS-CEEEEEEEEETTC---CSEEEEEEEESSCHHHHTCSSCCSSHHHHSCGGGHHHHHTTCEEEEEE
T ss_pred CCCEEEEEEEECCCC-CEEEEEEEeCCCC---CCeeEEEEEcCCCCccccccccccccccccchhHHHHHhCCeEEEEEC
Confidence 356778899999999 9999999999863 6789999999743321 11 11111111 45556999999999
Q ss_pred ecCCCCCChhHHhccc-----ccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEec
Q 003878 576 IRGGGEYGEEWHKGGA-----LAKKQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 649 (789)
Q Consensus 576 ~RG~g~~g~~~~~~~~-----~~~~~~~~~D~~~~~~~L~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~ 649 (789)
+||+|+++..+..... ..++....+|+.++++||.++ ++.| .||+++|+|+||+++++++.++|+.++|+|+.
T Consensus 97 ~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~~-~rv~l~G~S~GG~~al~~a~~~~~~l~a~v~~ 175 (615)
T 1mpx_A 97 VRGKYGSEGDYVMTRPLRGPLNPSEVDHATDAWDTIDWLVKNVSESN-GKVGMIGSSYEGFTVVMALTNPHPALKVAVPE 175 (615)
T ss_dssp CTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHHCTTEE-EEEEEEEETHHHHHHHHHHTSCCTTEEEEEEE
T ss_pred CCCCCCCCCccccccccccccccccccHHHHHHHHHHHHHhcCCCCC-CeEEEEecCHHHHHHHHHhhcCCCceEEEEec
Confidence 9999888766543311 112227789999999999998 7776 59999999999999999998889999999999
Q ss_pred CCcccccc-c-c-ccc---C-Cccchhh----------------------------------c------------CCCCc
Q 003878 650 VGVMDMLR-Y-H-KFT---I-GHAWVSD----------------------------------F------------GCSEE 676 (789)
Q Consensus 650 ~p~~d~~~-~-~-~~~---~-~~~~~~e----------------------------------~------------g~p~~ 676 (789)
+|+.|+.. . . ... . ...|... + ..|..
T Consensus 176 ~~~~d~~~~~~~~~~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 255 (615)
T 1mpx_A 176 SPMIDGWMGDDWFNYGAFRQVNFDYFTGQLSKRGKGAGIARQGHDDYSNFLQAGSAGDFAKAAGLEQLPWWHKLTEHAAY 255 (615)
T ss_dssp SCCCCTTTTSSSEETTEEBGGGHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGSHHHHHHHHTCSS
T ss_pred CCccccccccccccCCeehhhhHHHHHHhhcccCCcccccccchhHHHHHhhcCCccchhhhhccccchHHHHHHhCCCc
Confidence 99999543 1 1 000 0 0001100 0 00100
Q ss_pred HHHHHHHHhcCcccCCCC--CCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCc---EEE
Q 003878 677 EEEFYWLIKYSPLHNVRR--PWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNP---IIG 751 (789)
Q Consensus 677 ~~~~~~l~~~sP~~~v~~--~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~---~~l 751 (789)
-+++++.||..++++ + ..|+|++||.+|.+ +..++.+++++|++. |.| ..|
T Consensus 256 ---d~~w~~~Sp~~~~~~~~I----------~~P~Lii~G~~D~~-~~~~~~~~~~aL~~~----------g~p~~~~~l 311 (615)
T 1mpx_A 256 ---DAFWQEQALDKVMARTPL----------KVPTMWLQGLWDQE-DMWGAIHSYAAMEPR----------DKRNTLNYL 311 (615)
T ss_dssp ---CHHHHTTCHHHHHHTSCC----------CSCEEEEEETTCSS-CSSHHHHHHHHHGGG----------CTTSSSEEE
T ss_pred ---ChhhhhcChhhhhhccCC----------CCCEEEeecccCcc-ccccHHHHHHHHHhh----------cCCCcCCEE
Confidence 123566788877777 7 78999999999998 889999999999987 544 889
Q ss_pred EEeCCCCcCCCC-----c-------hhhHHHHHHHHHHHHHHHhCCC
Q 003878 752 RIERKAGHGVGL-----P-------TQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 752 ~~~~~~gH~~~~-----~-------~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
.+.|. +|+... . ..........+++||+++|+..
T Consensus 312 vigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 357 (615)
T 1mpx_A 312 VMGPW-RHSQVNYDGSALGALNFEGDTARQFRHDVLRPFFDQYLVDG 357 (615)
T ss_dssp EEESC-CTTGGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred EECCC-CCCCccccccccCccccCcccchhhhhhHHHHHHHHHhcCC
Confidence 99887 697511 0 1111222567899999999754
No 29
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=99.85 E-value=4e-20 Score=201.44 Aligned_cols=237 Identities=14% Similarity=0.086 Sum_probs=164.7
Q ss_pred CCcEEEEEEecCCCceEEEEEEEecCCCC--------------CCCCccEEEEEcCCCCccCCCC---CCHHHHHHHHcC
Q 003878 505 EFHVHQVFVPSKDGSTKIPMFIVSKKNIK--------------LDGSHPCLLYGYGGFNISVTPS---FSVSRTILMRHL 567 (789)
Q Consensus 505 ~~~~~~~~~~s~dg~~~i~~~l~~p~~~~--------------~~~~~P~ll~~hGg~~~~~~~~---~~~~~~~~l~~~ 567 (789)
.+..+.+.+.+ + ..+++.++.|++.. ..++.|+||++|||........ |......+..++
T Consensus 69 ~v~~~dv~~~~--~-~~l~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~p~vv~~HGgg~~~g~~~~~~~~~~~~~la~~~ 145 (351)
T 2zsh_A 69 GVFSFDVLIDR--R-INLLSRVYRPAYADQEQPPSILDLEKPVDGDIVPVILFFHGGSFAHSSANSAIYDTLCRRLVGLC 145 (351)
T ss_dssp TEEEEEEEEET--T-TTEEEEEEEECCTTCSSCCCTTSTTCCCCSSSCEEEEEECCSTTTSCCTTBHHHHHHHHHHHHHH
T ss_pred CceEEEEEecC--C-CCeEEEEEecCCccccccccccccccccCCCCceEEEEECCCcCcCCCCcchhHHHHHHHHHHHc
Confidence 44566777765 4 56888999998742 2467899999999765433322 443334444258
Q ss_pred CeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcC----CCCCC-cEEEEeeChHHHHHHHHHHhCCC-
Q 003878 568 GAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG----YTQSR-KLCIEGGSNGGLLVGACINQRPD- 641 (789)
Q Consensus 568 G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~----~~d~~-~i~i~G~S~GG~l~~~~~~~~pd- 641 (789)
||+|+.+|+||+++.. ....++|+.++++||.++. .+|++ ||+++|+|+||.+++.++.++|+
T Consensus 146 g~~vv~~d~rg~~~~~-----------~~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~~~ 214 (351)
T 2zsh_A 146 KCVVVSVNYRRAPENP-----------YPCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAGES 214 (351)
T ss_dssp TSEEEEECCCCTTTSC-----------TTHHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHHTT
T ss_pred CCEEEEecCCCCCCCC-----------CchhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhhcc
Confidence 9999999999977642 2356899999999999864 47899 99999999999999999999898
Q ss_pred --ceeEEEecCCcccccccccccCCccchhhcCCC-CcHHHHH-HHHhcC------------ccc----CCCCCCCCCCC
Q 003878 642 --LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCS-EEEEEFY-WLIKYS------------PLH----NVRRPWEQNPD 701 (789)
Q Consensus 642 --~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p-~~~~~~~-~l~~~s------------P~~----~v~~~~~~~~~ 701 (789)
+++++|+.+|+++...... ......+.+ ....... .+..+. |+. .+.++
T Consensus 215 ~~~v~~~vl~~p~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i------ 283 (351)
T 2zsh_A 215 GIDVLGNILLNPMFGGNERTE-----SEKSLDGKYFVTVRDRDWYWKAFLPEGEDREHPACNPFSPRGKSLEGV------ 283 (351)
T ss_dssp TCCCCEEEEESCCCCCSSCCH-----HHHHHTTTSSCCHHHHHHHHHHHSCTTCCTTSTTTCTTSTTSCCCTTC------
T ss_pred CCCeeEEEEECCccCCCcCCh-----hhhhcCCCcccCHHHHHHHHHHhCCCCCCCCCcccCCCCCCccchhhC------
Confidence 8999999999887543211 000111111 0111111 112222 221 11111
Q ss_pred CCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc--hhhHHHHHHHHHHHH
Q 003878 702 KPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP--TQKMIDEAADRYGFM 779 (789)
Q Consensus 702 ~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~--~~~~~~~~~~~~~fl 779 (789)
..||+||++|++|..++ ++.+++++|++. +.++++++++++||++... .....+..+.+.+||
T Consensus 284 ---~~pP~Lii~G~~D~~~~--~~~~~~~~l~~~----------g~~~~~~~~~g~gH~~~~~~~~~~~~~~~~~i~~Fl 348 (351)
T 2zsh_A 284 ---SFPKSLVVVAGLDLIRD--WQLAYAEGLKKA----------GQEVKLMHLEKATVGFYLLPNNNHFHNVMDEISAFV 348 (351)
T ss_dssp ---CCCEEEEEEETTSTTHH--HHHHHHHHHHHT----------TCCEEEEEETTCCTTTTSSSCSHHHHHHHHHHHHHH
T ss_pred ---CCCCEEEEEcCCCcchH--HHHHHHHHHHHc----------CCCEEEEEECCCcEEEEecCCCHHHHHHHHHHHHHh
Confidence 24799999999999876 778899999987 8899999999999987641 123356777888998
Q ss_pred HH
Q 003878 780 AK 781 (789)
Q Consensus 780 ~~ 781 (789)
.+
T Consensus 349 ~~ 350 (351)
T 2zsh_A 349 NA 350 (351)
T ss_dssp HC
T ss_pred cC
Confidence 64
No 30
>3ls2_A S-formylglutathione hydrolase; psychrophilic organism; 2.20A {Pseudoalteromonas haloplanktis} SCOP: c.69.1.0
Probab=99.85 E-value=4.2e-21 Score=201.57 Aligned_cols=247 Identities=14% Similarity=0.113 Sum_probs=163.3
Q ss_pred EEEEEEec-CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCC-----
Q 003878 508 VHQVFVPS-KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGE----- 581 (789)
Q Consensus 508 ~~~~~~~s-~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~----- 581 (789)
.+++.+.+ .+| .++++.++.|++..+.++.|+||++||+.+.............+++++|++|+++|.++.|.
T Consensus 15 ~~~~~~~s~~~g-~~~~~~v~~P~~~~~~~~~P~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~~g~~~~~~ 93 (280)
T 3ls2_A 15 HKQYTHSAVSTH-CTMRFAVFLPPGASESNKVPVLYWLSGLTCTDENFMQKAGAFKKAAELGIAIVAPDTSPRGDNVPNE 93 (280)
T ss_dssp EEEEEEEETTTT-EEEEEEEEECTTCBTTBCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCCC
T ss_pred EEEEEEechhcC-CceEEEEEcCCCCCCCCCcCEEEEeCCCCCChhhhhcchhHHHHHhhCCeEEEEeCCcccccccccc
Confidence 45566655 578 99999999999876678899999999986654321110112456666899999999764331
Q ss_pred ------CChhHHhccccc--CCcchH-HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 582 ------YGEEWHKGGALA--KKQNCF-DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 582 ------~g~~~~~~~~~~--~~~~~~-~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
.|..|+...... .....+ +++.+.+..+++..+..++|++|+|+|+||++++.++.++|++|+++++.+|+
T Consensus 94 ~~~~~g~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~ 173 (280)
T 3ls2_A 94 DSYDFAQGAGFYVNATQAPYNTHFNMYDYVVNELPALIEQHFPVTSTKAISGHSMGGHGALMIALKNPQDYVSASAFSPI 173 (280)
T ss_dssp SCTTSSTTCCTTCBCCSTTTTTTCBHHHHHHTHHHHHHHHHSSEEEEEEEEEBTHHHHHHHHHHHHSTTTCSCEEEESCC
T ss_pred cccccccCCccccccccccccccccHHHHHHHHHHHHHHhhCCCCCCeEEEEECHHHHHHHHHHHhCchhheEEEEecCc
Confidence 122222221111 011122 33333333333333434589999999999999999999999999999999998
Q ss_pred ccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCC--CCeEEEEecCCCCCCCcHH-HHHHH
Q 003878 653 MDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQ--YPSTLLLTADHDDRVVPLH-SLKLL 729 (789)
Q Consensus 653 ~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~--~pp~Li~~g~~D~~V~~~~-~~~~~ 729 (789)
+++....... ..+...+|.. .+. +..++|...+.+. .. .+|+|++||++|..|+... +.+++
T Consensus 174 ~~~~~~~~~~--~~~~~~~g~~--~~~---~~~~~~~~~~~~~--------~~~~~~p~li~~G~~D~~v~~~~~~~~~~ 238 (280)
T 3ls2_A 174 VNPINCPWGV--KAFTGYLGAD--KTT---WAQYDSCKLMAKA--------EQSNYLPMLVSQGDADNFLDEQLKPQNLV 238 (280)
T ss_dssp SCGGGSHHHH--HHHHHHHCSC--GGG---TGGGCHHHHHHTC--------CGGGCCCEEEEEETTCTTCCCCCCHHHHH
T ss_pred cCcccCcchh--hHHHhhcCch--HHH---HHhcCHHHHHHhc--------cccCCCcEEEEEeCCCcccCCchhHHHHH
Confidence 8864321000 0011123321 111 1344555544443 11 5799999999999999854 88999
Q ss_pred HHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 730 ATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 730 ~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
++|++. |.+++++++++++|.+.. ......+.++|+.++|.
T Consensus 239 ~~l~~~----------g~~~~~~~~~g~~H~~~~----~~~~~~~~~~~~~~~l~ 279 (280)
T 3ls2_A 239 AVAKQK----------DYPLTLEMQTGYDHSYFF----ISSFIDQHLVFHHQYLS 279 (280)
T ss_dssp HHHHHH----------TCCEEEEEETTCCSSHHH----HHHHHHHHHHHHHHHHC
T ss_pred HHHHHh----------CCCceEEEeCCCCCchhh----HHHHHHHHHHHHHHHhc
Confidence 999998 899999999999998632 23567788999998875
No 31
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=99.85 E-value=9.3e-21 Score=205.73 Aligned_cols=239 Identities=16% Similarity=0.143 Sum_probs=171.6
Q ss_pred CCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCC
Q 003878 504 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 583 (789)
Q Consensus 504 ~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g 583 (789)
..+..+.+.+++.|| .+|+++++.|++ .++.|+||++||+.+.... |.. ...++. +||.|+++|+||.|+.+
T Consensus 78 ~~~~~~~~~~~~~~g-~~l~~~~~~P~~---~~~~p~vv~~HG~g~~~~~--~~~-~~~~~~-~G~~v~~~D~rG~g~s~ 149 (346)
T 3fcy_A 78 SFAECYDLYFTGVRG-ARIHAKYIKPKT---EGKHPALIRFHGYSSNSGD--WND-KLNYVA-AGFTVVAMDVRGQGGQS 149 (346)
T ss_dssp TTEEEEEEEEECGGG-CEEEEEEEEESC---SSCEEEEEEECCTTCCSCC--SGG-GHHHHT-TTCEEEEECCTTSSSSC
T ss_pred CceEEEEEEEEcCCC-CEEEEEEEecCC---CCCcCEEEEECCCCCCCCC--hhh-hhHHHh-CCcEEEEEcCCCCCCCC
Confidence 356778899999999 999999999987 4678999999998776543 332 235555 99999999999988765
Q ss_pred hhHHhc-----------ccc-cC----CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEE
Q 003878 584 EEWHKG-----------GAL-AK----KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCAL 647 (789)
Q Consensus 584 ~~~~~~-----------~~~-~~----~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v 647 (789)
...... +.. .. ....++|+.++++++.....+|++||+++|+|+||.+++.++.++|+ ++++|
T Consensus 150 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~-v~~~v 228 (346)
T 3fcy_A 150 QDVGGVTGNTLNGHIIRGLDDDADNMLFRHIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR-VRKVV 228 (346)
T ss_dssp CCCCCCSSCCSBCSSSTTTTSCGGGCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT-CCEEE
T ss_pred CCCcccCCCCcCcceeccccCCHHHHHHHHHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc-ccEEE
Confidence 432211 000 00 01236899999999999888899999999999999999999999998 99999
Q ss_pred ecCCcccccc-ccccc-CCc------cchhhcCCC---CcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCC
Q 003878 648 AHVGVMDMLR-YHKFT-IGH------AWVSDFGCS---EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADH 716 (789)
Q Consensus 648 ~~~p~~d~~~-~~~~~-~~~------~~~~e~g~p---~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~ 716 (789)
+.+|+++... ..... ... .|.. +..| ...+.+..+..+++...+.++ .+|+|+++|++
T Consensus 229 l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~~~~~~~i----------~~P~lii~G~~ 297 (346)
T 3fcy_A 229 SEYPFLSDYKRVWDLDLAKNAYQEITDYFR-LFDPRHERENEVFTKLGYIDVKNLAKRI----------KGDVLMCVGLM 297 (346)
T ss_dssp EESCSSCCHHHHHHTTCCCGGGHHHHHHHH-HHCTTCTTHHHHHHHHGGGCHHHHGGGC----------CSEEEEEEETT
T ss_pred ECCCcccCHHHHhhccccccchHHHHHHHH-hcCCCcchHHHHHHHhCcccHHHHHHhc----------CCCEEEEeeCC
Confidence 9999765321 11111 000 0111 1122 223344445555555566665 68999999999
Q ss_pred CCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 717 DDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 717 D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
|..||+.++.++++++. .++++.+++++||++.. +..+.+.+||.+
T Consensus 298 D~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~gH~~~~------~~~~~i~~fl~~ 343 (346)
T 3fcy_A 298 DQVCPPSTVFAAYNNIQ-------------SKKDIKVYPDYGHEPMR------GFGDLAMQFMLE 343 (346)
T ss_dssp CSSSCHHHHHHHHTTCC-------------SSEEEEEETTCCSSCCT------THHHHHHHHHHT
T ss_pred CCcCCHHHHHHHHHhcC-------------CCcEEEEeCCCCCcCHH------HHHHHHHHHHHH
Confidence 99999998877776543 26799999999999861 335577888875
No 32
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=99.84 E-value=1.6e-20 Score=220.22 Aligned_cols=251 Identities=14% Similarity=0.084 Sum_probs=179.3
Q ss_pred CCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccC--CCCCC-----HHH--H-HHHHcCCeEEEEE
Q 003878 505 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV--TPSFS-----VSR--T-ILMRHLGAVFCIA 574 (789)
Q Consensus 505 ~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~--~~~~~-----~~~--~-~~l~~~G~~v~~~ 574 (789)
.+..+.+.+++.|| .+|.++++.|++. ++.|+||+.||. +... ...+. ... . ++|+++||+|+.+
T Consensus 34 ~~~~~~v~i~~~DG-~~L~~~l~~P~~~---~~~PvIl~~hpy-g~~~~~~~~~~~~~~~~~~~~~~~~la~~GyaVv~~ 108 (652)
T 2b9v_A 34 DYIKREVMVPMRDG-VKLYTVIVIPKNA---RNAPILLTRTPY-NAKGRANRVPNALTMREVLPQGDDVFVEGGYIRVFQ 108 (652)
T ss_dssp SEEEEEEEEECTTS-CEEEEEEEEETTC---CSEEEEEEEESS-CHHHHTCSSTTCSSHHHHSCGGGHHHHHTTCEEEEE
T ss_pred CcEEEEEEEECCCC-cEEEEEEEecCCC---CCccEEEEECCC-CCCcccccccccccccccccchHHHHHhCCCEEEEE
Confidence 46678899999999 9999999999863 678999999863 3221 11111 111 1 4555699999999
Q ss_pred eecCCCCCChhHHhccc-----ccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEe
Q 003878 575 NIRGGGEYGEEWHKGGA-----LAKKQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALA 648 (789)
Q Consensus 575 ~~RG~g~~g~~~~~~~~-----~~~~~~~~~D~~~~~~~L~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~ 648 (789)
|+||+|+++..|..... ...+....+|+.++++||.++ ++.| .||+++|+|+||+++++++.++|+.++|+|+
T Consensus 109 D~RG~g~S~g~~~~~~~~~~~~~~~g~~~~~D~~~~i~~l~~~~~~~d-~rvgl~G~SyGG~~al~~a~~~~~~lka~v~ 187 (652)
T 2b9v_A 109 DIRGKYGSQGDYVMTRPPHGPLNPTKTDETTDAWDTVDWLVHNVPESN-GRVGMTGSSYEGFTVVMALLDPHPALKVAAP 187 (652)
T ss_dssp ECTTSTTCCSCCCTTCCCSBTTBCSSCCHHHHHHHHHHHHHHSCTTEE-EEEEEEEEEHHHHHHHHHHTSCCTTEEEEEE
T ss_pred ecCcCCCCCCcccccccccccccccccchhhHHHHHHHHHHhcCCCCC-CCEEEEecCHHHHHHHHHHhcCCCceEEEEe
Confidence 99999988876644321 112237889999999999999 8887 5999999999999999999988999999999
Q ss_pred cCCcccccc-cccccCCc------cchhh------------------c----------------------------CCCC
Q 003878 649 HVGVMDMLR-YHKFTIGH------AWVSD------------------F----------------------------GCSE 675 (789)
Q Consensus 649 ~~p~~d~~~-~~~~~~~~------~~~~e------------------~----------------------------g~p~ 675 (789)
.+|+.|+.. ......+. .|... | +.|.
T Consensus 188 ~~~~~d~~~~d~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 267 (652)
T 2b9v_A 188 ESPMVDGWMGDDWFHYGAFRQGAFDYFVSQMTARGGGNDIPRRDADDYTNFLKAGSAGSFATQAGLDQYPFWQRMHAHPA 267 (652)
T ss_dssp EEECCCTTTBSSSEETTEEBTTHHHHHHHHHSSSSCCCCCCCSSSCHHHHHHHHCSHHHHHHHTTGGGCHHHHHHHHCCS
T ss_pred cccccccccccceecCCchhhhhHHHHHHhhhcccCcccccccchHHHHHHhhcCchhhHHHhhccccchHHHHHHhCCC
Confidence 999999753 11000000 11100 0 0010
Q ss_pred cHHHHHHHHhcCcccCCCC--CCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCC--CcEEE
Q 003878 676 EEEEFYWLIKYSPLHNVRR--PWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT--NPIIG 751 (789)
Q Consensus 676 ~~~~~~~l~~~sP~~~v~~--~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~l 751 (789)
. -+++++.||..++++ + ..|+|++||.+|.+ +..++.+++++|++. + .+..|
T Consensus 268 ~---d~yw~~~Sp~~~~~~~~I----------~~PvLiv~G~~D~~-~~~~~~~~~~aL~~~----------g~~~~~~l 323 (652)
T 2b9v_A 268 Y---DAFWQGQALDKILAQRKP----------TVPMLWEQGLWDQE-DMWGAIHAWQALKDA----------DVKAPNTL 323 (652)
T ss_dssp S---SHHHHTTCHHHHHHHHCC----------CSCEEEEEETTCSS-CSSHHHHHHHHHHHT----------TCSSCEEE
T ss_pred C---ChHHhcCChhhhhhcCCC----------CCCEEEEeecCCcc-ccccHHHHHHHHHhc----------CCCCCCEE
Confidence 0 022456688777777 6 78999999999998 678999999999987 6 88899
Q ss_pred EEeCCCCcCCCC-----c------hh-hHHHHHHHHHHHHHHHhCCC
Q 003878 752 RIERKAGHGVGL-----P------TQ-KMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 752 ~~~~~~gH~~~~-----~------~~-~~~~~~~~~~~fl~~~l~~~ 786 (789)
.+.|. +|+... . .. ........+++||+++|+..
T Consensus 324 vigp~-~H~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~wfd~~Lkg~ 369 (652)
T 2b9v_A 324 VMGPW-RHSGVNYNGSTLGPLEFEGDTAHQYRRDVFRPFFDEYLKPG 369 (652)
T ss_dssp EEESC-CTTGGGSCCSEETTEECSSCHHHHHHHHTHHHHHHHHHSTT
T ss_pred EECCC-CCCCcccccccCCccccccccchhhhhhHHHHHHHHHhCCC
Confidence 99876 797521 0 01 11223577899999999754
No 33
>3i6y_A Esterase APC40077; lipase, structural genomics, PSI-2, PR structure initiative, midwest center for structural genomic hydrolase; HET: MSE; 1.75A {Oleispira antarctica} PDB: 3s8y_A
Probab=99.84 E-value=5.1e-21 Score=200.96 Aligned_cols=247 Identities=16% Similarity=0.093 Sum_probs=164.5
Q ss_pred cEEEEEEec-CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCC--CC
Q 003878 507 HVHQVFVPS-KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGE--YG 583 (789)
Q Consensus 507 ~~~~~~~~s-~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~--~g 583 (789)
..+.+.+.+ .+| .++++.++.|++....++.|+||++||+.+.............+++++|++|+++|.|+.|. .+
T Consensus 16 ~~~~~~~~s~~~g-~~~~~~v~~P~~~~~~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~pd~~~~g~~~~~ 94 (280)
T 3i6y_A 16 WHKQYSHVSNTLN-CAMRFAIYLPPQASTGAKVPVLYWLSGLTCSDENFMQKAGAQRLAAELGIAIVAPDTSPRGEGVAD 94 (280)
T ss_dssp EEEEEEEEETTTT-EEEEEEEEECGGGGTTCCEEEEEEECCTTCCSSHHHHHSCCHHHHHHHTCEEEEECSSCCSTTCCC
T ss_pred cEEEEEEeccccC-CeeEEEEEeCCCCCCCCCccEEEEecCCCCChhHHhhcccHHHHHhhCCeEEEEeCCcccccccCc
Confidence 345555555 578 99999999999866678899999999987654321110013456666899999999875432 11
Q ss_pred ---------hhHHhcccccC--CcchHHH-HH-HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecC
Q 003878 584 ---------EEWHKGGALAK--KQNCFDD-FI-SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHV 650 (789)
Q Consensus 584 ---------~~~~~~~~~~~--~~~~~~D-~~-~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~ 650 (789)
..|+....... ....+.+ +. +.+.++.+..-+ ++|++|+|+|+||++++.++.++|++|+++|+.+
T Consensus 95 ~~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s 173 (280)
T 3i6y_A 95 DEGYDLGQGAGFYVNATQAPWNRHYQMYDYVVNELPELIESMFPV-SDKRAIAGHSMGGHGALTIALRNPERYQSVSAFS 173 (280)
T ss_dssp CSSTTSSTTCCTTCBCCSTTGGGTCBHHHHHHTHHHHHHHHHSSE-EEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEES
T ss_pred ccccccccCccccccccCCCccchhhHHHHHHHHHHHHHHHhCCC-CCCeEEEEECHHHHHHHHHHHhCCccccEEEEeC
Confidence 11221111100 0112222 32 334444444323 6899999999999999999999999999999999
Q ss_pred CcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHH-HHHHH
Q 003878 651 GVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKLL 729 (789)
Q Consensus 651 p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~-~~~~~ 729 (789)
|++++..... . ...+...+|.. ++. +..++|...+... ...+|+|++||++|..|+... +.+++
T Consensus 174 ~~~~~~~~~~-~-~~~~~~~~~~~--~~~---~~~~~~~~~~~~~--------~~~~P~li~~G~~D~~v~~~~~~~~~~ 238 (280)
T 3i6y_A 174 PINNPVNCPW-G-QKAFTAYLGKD--TDT---WREYDASLLMRAA--------KQYVPALVDQGEADNFLAEQLKPEVLE 238 (280)
T ss_dssp CCCCGGGSHH-H-HHHHHHHHCSC--GGG---TGGGCHHHHHHHC--------SSCCCEEEEEETTCTTHHHHTCHHHHH
T ss_pred CccccccCch-H-HHHHHHhcCCc--hHH---HHhcCHHHHHHhc--------CCCccEEEEEeCCCccccchhhHHHHH
Confidence 9888643210 0 00111122321 111 1345565555443 114799999999999998755 89999
Q ss_pred HHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 730 ATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 730 ~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
++|++. |.++++++++++||.+. ...+...+.++|+.++|+
T Consensus 239 ~~l~~~----------g~~~~~~~~~g~~H~~~----~~~~~~~~~l~~~~~~l~ 279 (280)
T 3i6y_A 239 AAASSN----------NYPLELRSHEGYDHSYY----FIASFIEDHLRFHSNYLN 279 (280)
T ss_dssp HHHHHT----------TCCEEEEEETTCCSSHH----HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHc----------CCCceEEEeCCCCccHH----HHHHhHHHHHHHHHhhcc
Confidence 999988 89999999999999862 234567788999999885
No 34
>3e4d_A Esterase D; S-formylglutathione hydrolase, hydrolase fold family, catalytic triad, kinetics, proposed reaction mechanism; HET: MSE; 2.01A {Agrobacterium tumefaciens} SCOP: c.69.1.0
Probab=99.84 E-value=7.6e-21 Score=199.27 Aligned_cols=247 Identities=12% Similarity=0.074 Sum_probs=165.9
Q ss_pred cEEEEEEec-CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCCh-
Q 003878 507 HVHQVFVPS-KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE- 584 (789)
Q Consensus 507 ~~~~~~~~s-~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~- 584 (789)
..+.+.+.+ .+| .++++.++.|++.. .++.|+||++||+.+.............+++++|++|+++|.||.|....
T Consensus 14 ~~~~~~~~s~~~g-~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~g~G~s~~~ 91 (278)
T 3e4d_A 14 MQGVFSHQSETLK-SEMTFAVYVPPKAI-HEPCPVVWYLSGLTCTHANVMEKGEYRRMASELGLVVVCPDTSPRGNDVPD 91 (278)
T ss_dssp EEEEEEEEETTTT-EEEEEEEEECGGGG-TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEECCSSCCSTTSCC
T ss_pred cEEEEEEeccccC-CcceEEEEcCCCCC-CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEecCCcccCccccc
Confidence 345555544 578 99999999998754 57899999999987654321110013456665799999999998664321
Q ss_pred ---hH--------Hhccccc--CCcchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEec
Q 003878 585 ---EW--------HKGGALA--KKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 649 (789)
Q Consensus 585 ---~~--------~~~~~~~--~~~~~~~D~~--~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~ 649 (789)
.| +...... .....+.+.+ ++++++.+..-+|+++|+++|+|+||.+++.++.++|++|+++|+.
T Consensus 92 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~ 171 (278)
T 3e4d_A 92 ELTNWQMGKGAGFYLDATEEPWSEHYQMYSYVTEELPALIGQHFRADMSRQSIFGHSMGGHGAMTIALKNPERFKSCSAF 171 (278)
T ss_dssp CTTCTTSBTTBCTTSBCCSTTTTTTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCTTTCSCEEEE
T ss_pred ccccccccCCccccccCCcCcccchhhHHHHHHHHHHHHHHhhcCCCcCCeEEEEEChHHHHHHHHHHhCCcccceEEEe
Confidence 11 1111110 0111233333 3566666664578899999999999999999999999999999999
Q ss_pred CCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHH-HHHH
Q 003878 650 VGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKL 728 (789)
Q Consensus 650 ~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~-~~~~ 728 (789)
+|++++..... . ...+...+|... +. +..++|...+... ...+|+|++||++|..|+... +.++
T Consensus 172 ~~~~~~~~~~~-~-~~~~~~~~~~~~--~~---~~~~~~~~~~~~~--------~~~~p~li~~G~~D~~v~~~~~~~~~ 236 (278)
T 3e4d_A 172 APIVAPSSADW-S-EPALEKYLGADR--AA---WRRYDACSLVEDG--------ARFPEFLIDQGKADSFLEKGLRPWLF 236 (278)
T ss_dssp SCCSCGGGCTT-T-HHHHHHHHCSCG--GG---GGGGCHHHHHHTT--------CCCSEEEEEEETTCTTHHHHTCTHHH
T ss_pred CCcccccCCcc-c-hhhHHHhcCCcH--HH---HHhcChhhHhhcC--------CCCCcEEEEecCCCcccccchhHHHH
Confidence 99888643211 0 001112233221 11 1344555444443 235799999999999998532 7899
Q ss_pred HHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 729 LATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 729 ~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
.++|++. |.+++++++++++|.+.. ..+...+++.|+.++|+
T Consensus 237 ~~~l~~~----------g~~~~~~~~~g~~H~~~~----~~~~~~~~l~~~~~~l~ 278 (278)
T 3e4d_A 237 EEAIKGT----------DIGLTLRMHDRYDHSYYF----ISTFMDDHLKWHAERLG 278 (278)
T ss_dssp HHHHTTS----------SCEEEEEEETTCCSSHHH----HHHHHHHHHHHHHHHHC
T ss_pred HHHHHHc----------CCCceEEEeCCCCcCHHH----HHHHHHHHHHHHHHhcC
Confidence 9999887 899999999999998632 23567788999998875
No 35
>3ain_A 303AA long hypothetical esterase; carboxylesterase, thermophilic, dimer, archaea, R267G, hydro; 1.65A {Sulfolobus tokodaii} PDB: 3aio_A 3ail_A 3aik_A 3aim_A
Probab=99.84 E-value=3.6e-19 Score=191.62 Aligned_cols=238 Identities=15% Similarity=0.099 Sum_probs=168.6
Q ss_pred CCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCcc-CCCCCCHHHHHHHHcCCeEEEEEeecCCCCC
Q 003878 504 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS-VTPSFSVSRTILMRHLGAVFCIANIRGGGEY 582 (789)
Q Consensus 504 ~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~-~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 582 (789)
..+.++.+.+++.+| +|++.++.|++ .++.|+||++|||.... ....|......+..+.||.|+.+|+||.++.
T Consensus 61 ~~~~~~~~~i~~~~~--~i~~~iy~P~~---~~~~p~vv~~HGGg~~~g~~~~~~~~~~~La~~~g~~Vv~~Dyrg~~~~ 135 (323)
T 3ain_A 61 EVGKIEDITIPGSET--NIKARVYYPKT---QGPYGVLVYYHGGGFVLGDIESYDPLCRAITNSCQCVTISVDYRLAPEN 135 (323)
T ss_dssp CCSEEEEEEEECSSS--EEEEEEEECSS---CSCCCEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTS
T ss_pred CccEEEEEEecCCCC--eEEEEEEecCC---CCCCcEEEEECCCccccCChHHHHHHHHHHHHhcCCEEEEecCCCCCCC
Confidence 456788899988777 79999999986 35789999999975332 2334444333443334999999999998864
Q ss_pred ChhHHhcccccCCcchHHHHHHHHHHHHHcCCC--CCCcEEEEeeChHHHHHHHHHHhCCCce---eEEEecCCcccccc
Q 003878 583 GEEWHKGGALAKKQNCFDDFISASEYLISAGYT--QSRKLCIEGGSNGGLLVGACINQRPDLF---GCALAHVGVMDMLR 657 (789)
Q Consensus 583 g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~--d~~~i~i~G~S~GG~l~~~~~~~~pd~f---~a~v~~~p~~d~~~ 657 (789)
. ....++|+.++++|+.+.... |++||+|+|+|+||.+++.++.++|++. +++|+.+|+++...
T Consensus 136 ~-----------~p~~~~d~~~~~~~l~~~~~~lgd~~~i~l~G~S~GG~lA~~~a~~~~~~~~~~~~~vl~~p~~~~~~ 204 (323)
T 3ain_A 136 K-----------FPAAVVDSFDALKWVYNNSEKFNGKYGIAVGGDSAGGNLAAVTAILSKKENIKLKYQVLIYPAVSFDL 204 (323)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTGGGGTCTTCEEEEEETHHHHHHHHHHHHHHHTTCCCSEEEEESCCCSCCS
T ss_pred C-----------CcchHHHHHHHHHHHHHhHHHhCCCceEEEEecCchHHHHHHHHHHhhhcCCCceeEEEEeccccCCC
Confidence 2 234578999999999876311 7899999999999999999999888776 89999999887543
Q ss_pred cccccCCccchhhcCC-C-CcHHHHHH-H------------HhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCc
Q 003878 658 YHKFTIGHAWVSDFGC-S-EEEEEFYW-L------------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVP 722 (789)
Q Consensus 658 ~~~~~~~~~~~~e~g~-p-~~~~~~~~-l------------~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~ 722 (789)
... .+ .++.. + ...+...+ . ...+|+.. .. ...||+||++|++|..+
T Consensus 205 ~~~-----~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~sp~~~--~l--------~~l~P~lii~G~~D~l~-- 266 (323)
T 3ain_A 205 ITK-----SL-YDNGEGFFLTREHIDWFGQQYLRSFADLLDFRFSPILA--DL--------NDLPPALIITAEHDPLR-- 266 (323)
T ss_dssp CCH-----HH-HHHSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGS--CC--------TTCCCEEEEEETTCTTH--
T ss_pred CCc-----cH-HHhccCCCCCHHHHHHHHHHhCCCCcccCCcccCcccC--cc--------cCCCHHHEEECCCCccH--
Confidence 211 00 00000 0 01111100 1 12345443 11 13579999999999987
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc---hhhHHHHHHHHHHHHHHHhCC
Q 003878 723 LHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 723 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~ 785 (789)
.++.+++++|+.. |.++++.+++++||++... .....+..+.+.+||.++++.
T Consensus 267 ~~~~~~a~~l~~a----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 322 (323)
T 3ain_A 267 DQGEAYANKLLQS----------GVQVTSVGFNNVIHGFVSFFPFIEQGRDAIGLIGYVLRKVFYG 322 (323)
T ss_dssp HHHHHHHHHHHHT----------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHc----------CCCEEEEEECCCccccccccCcCHHHHHHHHHHHHHHHHHhcC
Confidence 5788999999988 8899999999999997542 123356778899999988753
No 36
>2hm7_A Carboxylesterase; alpha/beta hydrolase fold, hydrolase; 2.00A {Alicyclobacillus acidocaldarius} PDB: 1evq_A* 1u4n_A 1qz3_A
Probab=99.84 E-value=1.2e-19 Score=193.78 Aligned_cols=241 Identities=12% Similarity=0.061 Sum_probs=168.0
Q ss_pred CCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC-CCCCHHHHHHHHcCCeEEEEEeecCCCCC
Q 003878 504 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGEY 582 (789)
Q Consensus 504 ~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~ 582 (789)
.....+.+.+++.+| +|++.++.|++. .++.|+||++|||...... ..|......+..+.||.|+.+|+||.++.
T Consensus 44 ~~~~~~~~~i~~~~g--~l~~~~~~P~~~--~~~~p~vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~~~~ 119 (310)
T 2hm7_A 44 PVAEVREFDMDLPGR--TLKVRMYRPEGV--EPPYPALVYYHGGSWVVGDLETHDPVCRVLAKDGRAVVFSVDYRLAPEH 119 (310)
T ss_dssp CCSEEEEEEEEETTE--EEEEEEEECTTC--CSSEEEEEEECCSTTTSCCTTTTHHHHHHHHHHHTSEEEEECCCCTTTS
T ss_pred CcceEEEEEeccCCC--eEEEEEEecCCC--CCCCCEEEEECCCccccCChhHhHHHHHHHHHhcCCEEEEeCCCCCCCC
Confidence 345678888988776 899999999863 3678999999997533333 34444333344424999999999998864
Q ss_pred ChhHHhcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCCC----ceeEEEecCCcccc
Q 003878 583 GEEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPD----LFGCALAHVGVMDM 655 (789)
Q Consensus 583 g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~pd----~f~a~v~~~p~~d~ 655 (789)
. .....+|+.++++||.+.. .+|+++|+++|+|+||.+++.++.++|+ .++++|+.+|++++
T Consensus 120 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~v~~~vl~~p~~~~ 188 (310)
T 2hm7_A 120 K-----------FPAAVEDAYDALQWIAERAADFHLDPARIAVGGDSAGGNLAAVTSILAKERGGPALAFQLLIYPSTGY 188 (310)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTTGGGTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCCCEEEESCCCCC
T ss_pred C-----------CCccHHHHHHHHHHHHhhHHHhCCCcceEEEEEECHHHHHHHHHHHHHHhcCCCCceEEEEEcCCcCC
Confidence 3 2345789999999999874 3588999999999999999999988776 69999999999886
Q ss_pred cccccccCCccchhhcC-CC-CcHHHHHH-HH------------hcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 003878 656 LRYHKFTIGHAWVSDFG-CS-EEEEEFYW-LI------------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRV 720 (789)
Q Consensus 656 ~~~~~~~~~~~~~~e~g-~p-~~~~~~~~-l~------------~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V 720 (789)
..... ...+ .++. .+ .......+ .. ..+|.....- ...||+||++|++|..+
T Consensus 189 ~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l---------~~~~P~lii~G~~D~~~ 255 (310)
T 2hm7_A 189 DPAHP---PASI-EENAEGYLLTGGMMLWFRDQYLNSLEELTHPWFSPVLYPDL---------SGLPPAYIATAQYDPLR 255 (310)
T ss_dssp CTTSC---CHHH-HHTSSSSSSCHHHHHHHHHHHCSSGGGGGCTTTCGGGCSCC---------TTCCCEEEEEEEECTTH
T ss_pred CcccC---Ccch-hhcCCCCCCCHHHHHHHHHHhCCCCCccCCccCCCCcCccc---------cCCCCEEEEEecCCCch
Confidence 51110 0000 0110 00 01111111 11 1234332111 12479999999999987
Q ss_pred CcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc---hhhHHHHHHHHHHHHHHHhC
Q 003878 721 VPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 721 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~ 784 (789)
.++.+++++|++. |.++++++++++||++... ..+..+....+.+||.++|+
T Consensus 256 --~~~~~~~~~l~~~----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~ 310 (310)
T 2hm7_A 256 --DVGKLYAEALNKA----------GVKVEIENFEDLIHGFAQFYSLSPGATKALVRIAEKLRDALA 310 (310)
T ss_dssp --HHHHHHHHHHHHT----------TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHHHC
T ss_pred --HHHHHHHHHHHHC----------CCCEEEEEeCCCccchhhhcccChHHHHHHHHHHHHHHHHhC
Confidence 6789999999987 8899999999999986531 12235677889999998874
No 37
>1lzl_A Heroin esterase; alpha/beta hydrolase; 1.30A {Rhodococcus SP} SCOP: c.69.1.2 PDB: 1lzk_A
Probab=99.84 E-value=1.8e-19 Score=193.85 Aligned_cols=242 Identities=17% Similarity=0.137 Sum_probs=170.0
Q ss_pred CCCcEEEEEEecCCCce-EEEEEEEecCCCCCCCCccEEEEEcCCCCccCC-CCCCHHHHHHHHcCCeEEEEEeecCCCC
Q 003878 504 SEFHVHQVFVPSKDGST-KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGE 581 (789)
Q Consensus 504 ~~~~~~~~~~~s~dg~~-~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~ 581 (789)
..+..+.+.+++.|| . +|++.++.|++. .++.|+||++|||...... ..+......+..+.||.|+.+|+||.|+
T Consensus 47 ~~~~~~~~~i~~~~g-~~~l~~~~~~P~~~--~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~G~~Vv~~d~rg~~~ 123 (323)
T 1lzl_A 47 DGVSLRELSAPGLDG-DPEVKIRFVTPDNT--AGPVPVLLWIHGGGFAIGTAESSDPFCVEVARELGFAVANVEYRLAPE 123 (323)
T ss_dssp TTEEEEEEEECCSTT-CCCEEEEEEEESSC--CSCEEEEEEECCSTTTSCCGGGGHHHHHHHHHHHCCEEEEECCCCTTT
T ss_pred CCceEEEEEecCCCC-CceeEEEEEecCCC--CCCCcEEEEECCCccccCChhhhHHHHHHHHHhcCcEEEEecCCCCCC
Confidence 356788899999999 8 899999999852 4678999999998633222 2344434444443599999999999886
Q ss_pred CChhHHhcccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhCCC----ceeEEEecCCccc
Q 003878 582 YGEEWHKGGALAKKQNCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQRPD----LFGCALAHVGVMD 654 (789)
Q Consensus 582 ~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~pd----~f~a~v~~~p~~d 654 (789)
.. .....+|+.++++||.+. -.+|+++|+++|+|+||.+++.++.++|+ .++++|+.+|+++
T Consensus 124 ~~-----------~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~ 192 (323)
T 1lzl_A 124 TT-----------FPGPVNDCYAALLYIHAHAEELGIDPSRIAVGGQSAGGGLAAGTVLKARDEGVVPVAFQFLEIPELD 192 (323)
T ss_dssp SC-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHHCSSCCCEEEEESCCCC
T ss_pred CC-----------CCchHHHHHHHHHHHHhhHHHcCCChhheEEEecCchHHHHHHHHHHHhhcCCCCeeEEEEECCccC
Confidence 42 234578999999999874 23688999999999999999999988776 4999999999988
Q ss_pred ccccccccCCccchhhcCC-C-CcHHH----HHHHH--------------hcCcccCCCCCCCCCCCCCCCCCeEEEEec
Q 003878 655 MLRYHKFTIGHAWVSDFGC-S-EEEEE----FYWLI--------------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTA 714 (789)
Q Consensus 655 ~~~~~~~~~~~~~~~e~g~-p-~~~~~----~~~l~--------------~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g 714 (789)
...... . ..++.. + ..... ++.+. ..+|.....- ...||+||+||
T Consensus 193 ~~~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~---------~~~~P~li~~G 257 (323)
T 1lzl_A 193 DRLETV-----S-MTNFVDTPLWHRPNAILSWKYYLGESYSGPEDPDVSIYAAPSRATDL---------TGLPPTYLSTM 257 (323)
T ss_dssp TTCCSH-----H-HHHCSSCSSCCHHHHHHHHHHHHCTTCCCTTCSCCCTTTCGGGCSCC---------TTCCCEEEEEE
T ss_pred CCcCch-----h-HHHhccCCCCCHHHHHHHHHHhCCCCcccccccCCCcccCcccCccc---------CCCChhheEEC
Confidence 643211 0 001100 0 00000 00011 1233322111 12489999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc--hhhHHHHHHHHHHHHHHHhCCC
Q 003878 715 DHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP--TQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 715 ~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~--~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
++|..+ .++.+++++|++. |.++++++++++||++... ..+..+....+.+||.++++..
T Consensus 258 ~~D~~~--~~~~~~~~~l~~~----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 319 (323)
T 1lzl_A 258 ELDPLR--DEGIEYALRLLQA----------GVSVELHSFPGTFHGSALVATAAVSERGAAEALTAIRRGLRSL 319 (323)
T ss_dssp TTCTTH--HHHHHHHHHHHHT----------TCCEEEEEETTCCTTGGGSTTSHHHHHHHHHHHHHHHHHTCC-
T ss_pred CcCCch--HHHHHHHHHHHHc----------CCCEEEEEeCcCccCcccCccCHHHHHHHHHHHHHHHHHhccC
Confidence 999987 5889999999988 8899999999999986421 1223567788999999998643
No 38
>3fcx_A FGH, esterase D, S-formylglutathione hydrolase; retinoblastoma, genetic marker, cytoplasm, cytoplasmic vesicle, polymorphism, serine esterase; 1.50A {Homo sapiens} SCOP: c.69.1.0
Probab=99.83 E-value=6.7e-21 Score=199.88 Aligned_cols=246 Identities=14% Similarity=0.111 Sum_probs=158.9
Q ss_pred EEEEEe-cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEee--cCCCCCChh
Q 003878 509 HQVFVP-SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANI--RGGGEYGEE 585 (789)
Q Consensus 509 ~~~~~~-s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--RG~g~~g~~ 585 (789)
+.+.+. ..+| .++++.++.|++.. .++.|+||++||+.+.............+++++||+|+++|+ ||.+..|..
T Consensus 17 ~~~~~~s~~~~-~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rG~~~~~~~ 94 (282)
T 3fcx_A 17 KVFEHDSVELN-CKMKFAVYLPPKAE-TGKCPALYWLSGLTCTEQNFISKSGYHQSASEHGLVVIAPDTSPRGCNIKGED 94 (282)
T ss_dssp EEEEEEETTTT-EEEEEEEEECGGGG-TSCEEEEEEECCTTCCSHHHHHHSCCHHHHHHHTCEEEEECSCSSCCCC----
T ss_pred EEEEEEchhcC-CeeEEEEEcCCCCC-CCCCCEEEEEcCCCCCccchhhcchHHHHhhcCCeEEEEeccccCcccccccc
Confidence 444444 4578 99999999998753 368999999999876543211100113556669999999999 887765533
Q ss_pred --H--------HhcccccC---CcchHHHHH-HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCC
Q 003878 586 --W--------HKGGALAK---KQNCFDDFI-SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 651 (789)
Q Consensus 586 --~--------~~~~~~~~---~~~~~~D~~-~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p 651 (789)
| +....... ......++. +.++++.+.--+|++||+|+|+|+||++++.++.++|++|+++|+.+|
T Consensus 95 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~ 174 (282)
T 3fcx_A 95 ESWDFGTGAGFYVDATEDPWKTNYRMYSYVTEELPQLINANFPVDPQRMSIFGHSMGGHGALICALKNPGKYKSVSAFAP 174 (282)
T ss_dssp ----CCCCCCTTCBCCSTTHHHHCBHHHHHHTHHHHHHHHHSSEEEEEEEEEEETHHHHHHHHHHHTSTTTSSCEEEESC
T ss_pred ccccccCCcccccccCcccccchhhHHHHHHHHHHHHHHHHcCCCccceEEEEECchHHHHHHHHHhCcccceEEEEeCC
Confidence 1 11111000 001223334 334444434337899999999999999999999999999999999999
Q ss_pred cccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHH--HHHHH
Q 003878 652 VMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH--SLKLL 729 (789)
Q Consensus 652 ~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~--~~~~~ 729 (789)
++++....... ..+...+|.... .+..++|...+...- ...+|+|++||++|..||+.+ +.+++
T Consensus 175 ~~~~~~~~~~~--~~~~~~~~~~~~-----~~~~~~~~~~~~~~~-------~~~~p~li~~G~~D~~v~~~~~~~~~~~ 240 (282)
T 3fcx_A 175 ICNPVLCPWGK--KAFSGYLGTDQS-----KWKAYDATHLVKSYP-------GSQLDILIDQGKDDQFLLDGQLLPDNFI 240 (282)
T ss_dssp CCCGGGSHHHH--HHHHHHHC---C-----CGGGGCHHHHHTTCC----------CCEEEEEETTCHHHHTTSSCHHHHH
T ss_pred ccCcccCchhH--HHHHHhcCCchh-----hhhhcCHHHHHHhcc-------cCCCcEEEEcCCCCcccccchhhHHHHH
Confidence 98754321000 001112232200 012344444333320 126899999999999997665 66999
Q ss_pred HHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 730 ATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 730 ~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
++|++. |.++++++++++||.+.. ......+.+.|+.++|+
T Consensus 241 ~~l~~~----------g~~~~~~~~~g~~H~~~~----~~~~~~~~~~~~~~~l~ 281 (282)
T 3fcx_A 241 AACTEK----------KIPVVFRLQEDYDHSYYF----IATFITDHIRHHAKYLN 281 (282)
T ss_dssp HHHHHT----------TCCEEEEEETTCCSSHHH----HHHHHHHHHHHHHHHTT
T ss_pred HHHHHc----------CCceEEEECCCCCcCHHH----HHhhhHHHHHHHHHhhc
Confidence 999988 899999999999998732 23566778899988875
No 39
>2wir_A Pesta, alpha/beta hydrolase fold-3 domain protein; tertiary alcohol; 2.00A {Pyrobaculum calidifontis} PDB: 2yh2_A 3zwq_A
Probab=99.83 E-value=5.4e-20 Score=196.78 Aligned_cols=236 Identities=14% Similarity=0.135 Sum_probs=165.3
Q ss_pred CcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC-CCCCHHHHHHHHcCCeEEEEEeecCCCCCCh
Q 003878 506 FHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGEYGE 584 (789)
Q Consensus 506 ~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~ 584 (789)
...+.+.+++.+| +|+++++.|++ .++.|+||++|||...... ..+......+..+.||.|+.+|+||.|+..
T Consensus 49 ~~~~~~~i~~~~g--~~~~~~~~P~~---~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~d~rg~g~~~- 122 (313)
T 2wir_A 49 HRVEDITIPGRGG--PIRARVYRPRD---GERLPAVVYYHGGGFVLGSVETHDHVCRRLANLSGAVVVSVDYRLAPEHK- 122 (313)
T ss_dssp SEEEEEEEEETTE--EEEEEEEECSC---CSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHCCEEEEEECCCTTTSC-
T ss_pred ceEEEEEeeCCCC--cEEEEEEecCC---CCCccEEEEECCCcccCCChHHHHHHHHHHHHHcCCEEEEeecCCCCCCC-
Confidence 4578888988776 89999999986 3567999999998633222 334433334444359999999999988642
Q ss_pred hHHhcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCCCc----eeEEEecCCcccccc
Q 003878 585 EWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDMLR 657 (789)
Q Consensus 585 ~~~~~~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~pd~----f~a~v~~~p~~d~~~ 657 (789)
.....+|+.++++||.+.. .+|+++|+++|+|+||.+++.++.++|++ ++++|+.+|++|+..
T Consensus 123 ----------~~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~ 192 (313)
T 2wir_A 123 ----------FPAAVEDAYDAAKWVADNYDKLGVDNGKIAVAGDSAGGNLAAVTAIMARDRGESFVKYQVLIYPAVNLTG 192 (313)
T ss_dssp ----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCCSS
T ss_pred ----------CCchHHHHHHHHHHHHhHHHHhCCCcccEEEEEeCccHHHHHHHHHHhhhcCCCCceEEEEEcCccCCCC
Confidence 2345789999999998762 26788999999999999999999988887 999999999988432
Q ss_pred cccccCCccchhhcC----CCCcHHHHHHH-H------------hcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 003878 658 YHKFTIGHAWVSDFG----CSEEEEEFYWL-I------------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRV 720 (789)
Q Consensus 658 ~~~~~~~~~~~~e~g----~p~~~~~~~~l-~------------~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V 720 (789)
.... .+ ..+. .........++ . ..+|+...-. ..||+||++|++|..+
T Consensus 193 ~~~~----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~----------~~~P~lii~G~~D~~~ 257 (313)
T 2wir_A 193 SPTV----SR-VEYSGPEYVILTADLMAWFGRQYFSKPQDALSPYASPIFADLS----------NLPPALVITAEYDPLR 257 (313)
T ss_dssp CCCH----HH-HHTCSGGGCSSCHHHHHHHHHHHCSSGGGGGSTTTCGGGSCCT----------TCCCEEEEEEEECTTH
T ss_pred CCCc----CH-HHhcccCCCccCHHHHHHHHHHhCCCCCccCCCccCcCccccc----------CCCcceEEEcCcCcCh
Confidence 2100 00 0000 00011111111 1 1245422111 3589999999999987
Q ss_pred CcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc---hhhHHHHHHHHHHHHHHHhC
Q 003878 721 VPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 721 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~ 784 (789)
.++..++++|+.. |.+++++++++++|++... ..+..+....+.+||.++++
T Consensus 258 --~~~~~~~~~l~~~----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~~~ 312 (313)
T 2wir_A 258 --DEGELYAHLLKTR----------GVRAVAVRYNGVIHGFVNFYPILEEGREAVSQIAASIKSMAV 312 (313)
T ss_dssp --HHHHHHHHHHHHT----------TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHHTTT
T ss_pred --HHHHHHHHHHHHC----------CCCEEEEEeCCCceecccccccCHHHHHHHHHHHHHHHHHhc
Confidence 4788999999988 8999999999999987521 12335677888999988765
No 40
>2c7b_A Carboxylesterase, ESTE1; carboxyesterase, thermophilic enzyme, hydrolase, HSL, alpha/beta hydrolase fold; 2.3A {Uncultured archaeon}
Probab=99.83 E-value=2.4e-19 Score=191.51 Aligned_cols=240 Identities=17% Similarity=0.137 Sum_probs=164.6
Q ss_pred CCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC-CCCCHHHHHHHHcC-CeEEEEEeecCCCCC
Q 003878 505 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHL-GAVFCIANIRGGGEY 582 (789)
Q Consensus 505 ~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~-G~~v~~~~~RG~g~~ 582 (789)
....+.+.+++.+| +|++.++.|++ .++.|+||++||+...... ..|.. +...+.++ |+.|+++|+||.|+.
T Consensus 45 ~~~~~~~~i~~~~g--~i~~~~~~p~~---~~~~p~vv~~HGgg~~~g~~~~~~~-~~~~la~~~g~~v~~~d~rg~g~~ 118 (311)
T 2c7b_A 45 IAETRDVHIPVSGG--SIRARVYFPKK---AAGLPAVLYYHGGGFVFGSIETHDH-ICRRLSRLSDSVVVSVDYRLAPEY 118 (311)
T ss_dssp CSEEEEEEEEETTE--EEEEEEEESSS---CSSEEEEEEECCSTTTSCCTGGGHH-HHHHHHHHHTCEEEEECCCCTTTS
T ss_pred cceEEEEEecCCCC--cEEEEEEecCC---CCCCcEEEEECCCcccCCChhhhHH-HHHHHHHhcCCEEEEecCCCCCCC
Confidence 44678888988776 79999999986 2457999999998632222 23333 33444434 999999999998864
Q ss_pred ChhHHhcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCCC----ceeEEEecCCcccc
Q 003878 583 GEEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPD----LFGCALAHVGVMDM 655 (789)
Q Consensus 583 g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~pd----~f~a~v~~~p~~d~ 655 (789)
. .....+|+.+++++|.+.. .+|+++|+++|+|+||.+++.++.++|+ +++++|+.+|++++
T Consensus 119 ~-----------~~~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~ 187 (311)
T 2c7b_A 119 K-----------FPTAVEDAYAALKWVADRADELGVDPDRIAVAGDSAGGNLAAVVSILDRNSGEKLVKKQVLIYPVVNM 187 (311)
T ss_dssp C-----------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCC
T ss_pred C-----------CCccHHHHHHHHHHHHhhHHHhCCCchhEEEEecCccHHHHHHHHHHHHhcCCCCceeEEEECCccCC
Confidence 2 2335689999999998762 3588999999999999999999988776 59999999999884
Q ss_pred cccccccCCccchhhcCCC-CcHHHHHHH-------------HhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 003878 656 LRYHKFTIGHAWVSDFGCS-EEEEEFYWL-------------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVV 721 (789)
Q Consensus 656 ~~~~~~~~~~~~~~e~g~p-~~~~~~~~l-------------~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~ 721 (789)
........ ..+ ..+... .......++ ...+|+...-. ..||+|+++|++|..++
T Consensus 188 ~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~l~----------~~~P~lii~G~~D~~~~ 255 (311)
T 2c7b_A 188 TGVPTASL-VEF-GVAETTSLPIELMVWFGRQYLKRPEEAYDFKASPLLADLG----------GLPPALVVTAEYDPLRD 255 (311)
T ss_dssp SSCCCHHH-HHH-HHCTTCSSCHHHHHHHHHHHCSSTTGGGSTTTCGGGSCCT----------TCCCEEEEEETTCTTHH
T ss_pred ccccccCC-ccH-HHhccCCCCHHHHHHHHHHhCCCCccccCcccCccccccc----------CCCcceEEEcCCCCchH
Confidence 21110000 000 000000 000100000 12244433111 25799999999999885
Q ss_pred cHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc---hhhHHHHHHHHHHHHHHHhCC
Q 003878 722 PLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 722 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~ 785 (789)
++..++++|+.. +.++++++++++||++... ..+..+..+.+.+||.++++.
T Consensus 256 --~~~~~~~~l~~~----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~ 310 (311)
T 2c7b_A 256 --EGELYAYKMKAS----------GSRAVAVRFAGMVHGFVSFYPFVDAGREALDLAAASIRSGLQP 310 (311)
T ss_dssp --HHHHHHHHHHHT----------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHHHTCC
T ss_pred --HHHHHHHHHHHC----------CCCEEEEEeCCCccccccccccCHHHHHHHHHHHHHHHHHhcC
Confidence 667888889887 8899999999999987521 223356778899999998864
No 41
>3k6k_A Esterase/lipase; alpha/beta hydrolase fold; 2.20A {Uncultured bacterium} PDB: 3dnm_A
Probab=99.83 E-value=1.9e-19 Score=193.71 Aligned_cols=235 Identities=14% Similarity=0.061 Sum_probs=160.2
Q ss_pred CCCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC-CCCCHHHHHHHHcCCeEEEEEeecCCCC
Q 003878 503 RSEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGE 581 (789)
Q Consensus 503 ~~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~ 581 (789)
+.....+.+.+ +| .++ ++|++. ....|+||++|||...... ..+......++.+.||+|+++|||++++
T Consensus 55 ~~~~~~~~~~~---~g-~~~----~~p~~~--~~~~~~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~v~~~dyr~~~~ 124 (322)
T 3k6k_A 55 AEGVELTLTDL---GG-VPC----IRQATD--GAGAAHILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPE 124 (322)
T ss_dssp CTTCEEEEEEE---TT-EEE----EEEECT--TCCSCEEEEECCSTTTSCCHHHHHHHHHHHHHHHTCEEEEECCCCTTT
T ss_pred CCCceEEEEEE---CC-EeE----EecCCC--CCCCeEEEEEcCCcccCCChHHHHHHHHHHHHhcCCEEEEeeCCCCCC
Confidence 33455555555 67 655 466652 2334559999998533222 2233333444443599999999999775
Q ss_pred CChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCc----eeEEEecCCcccccc
Q 003878 582 YGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDMLR 657 (789)
Q Consensus 582 ~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~----f~a~v~~~p~~d~~~ 657 (789)
.. ....++|+.++++||.++ .+|+++|+|+|+|+||.+++.++.+.|+. ++++|+.+|++|+..
T Consensus 125 ~~-----------~~~~~~d~~~a~~~l~~~-~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~ 192 (322)
T 3k6k_A 125 NP-----------FPAAVDDCVAAYRALLKT-AGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTL 192 (322)
T ss_dssp SC-----------TTHHHHHHHHHHHHHHHH-HSSGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTC
T ss_pred CC-----------CchHHHHHHHHHHHHHHc-CCCCccEEEEecCccHHHHHHHHHHHHhcCCCCceEEEEecCCcCccc
Confidence 32 235679999999999998 46899999999999999999999887765 999999999998753
Q ss_pred cccccCCccchhhc-CCC-CcHHHHHHH------------HhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcH
Q 003878 658 YHKFTIGHAWVSDF-GCS-EEEEEFYWL------------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPL 723 (789)
Q Consensus 658 ~~~~~~~~~~~~e~-g~p-~~~~~~~~l------------~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~ 723 (789)
.... ..... ..+ ...+....+ ...+|+..... ..||+||+||++|.. ..
T Consensus 193 ~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~~~~~~----------~~pP~li~~G~~D~~--~~ 255 (322)
T 3k6k_A 193 SRWS-----NSNLADRDFLAEPDTLGEMSELYVGGEDRKNPLISPVYADLS----------GLPEMLIHVGSEEAL--LS 255 (322)
T ss_dssp CSHH-----HHHTGGGCSSSCHHHHHHHHHHHHTTSCTTCTTTCGGGSCCT----------TCCCEEEEEESSCTT--HH
T ss_pred Cccc-----hhhccCCCCcCCHHHHHHHHHHhcCCCCCCCCcCCccccccc----------CCCcEEEEECCcCcc--HH
Confidence 3210 00000 000 111111111 12355544333 368999999999987 46
Q ss_pred HHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc---hhhHHHHHHHHHHHHHHHhCCC
Q 003878 724 HSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 724 ~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
++.+++++|+.. |.++++++++++||++... ..+..+..+.+.+||.++|+..
T Consensus 256 ~~~~~~~~l~~~----------g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 311 (322)
T 3k6k_A 256 DSTTLAERAGAA----------GVSVELKIWPDMPHVFQMYGKFVNAADISIKEICHWISARISKL 311 (322)
T ss_dssp HHHHHHHHHHHT----------TCCEEEEEETTCCTTGGGGTTTCHHHHHHHHHHHHHHHTTCC--
T ss_pred HHHHHHHHHHHC----------CCCEEEEEECCCccccccccccChHHHHHHHHHHHHHHHHHhcc
Confidence 889999999998 8999999999999987532 2234577889999999998754
No 42
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=99.82 E-value=4.9e-19 Score=197.89 Aligned_cols=223 Identities=13% Similarity=0.064 Sum_probs=158.0
Q ss_pred EEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHH
Q 003878 521 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFD 600 (789)
Q Consensus 521 ~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~ 600 (789)
.+.+.++.|++ .++.|+||++||+.+. .+.. ...+|+++||+|+++|+||.++.... ......+
T Consensus 144 ~l~~~l~~P~~---~~~~P~Vv~~hG~~~~----~~~~-~a~~La~~Gy~V~a~D~rG~g~~~~~--------~~~~~~~ 207 (422)
T 3k2i_A 144 RVRATLFLPPG---PGPFPGIIDIFGIGGG----LLEY-RASLLAGHGFATLALAYYNFEDLPNN--------MDNISLE 207 (422)
T ss_dssp TEEEEEEECSS---SCCBCEEEEECCTTCS----CCCH-HHHHHHTTTCEEEEEECSSSTTSCSS--------CSCEETH
T ss_pred cEEEEEEcCCC---CCCcCEEEEEcCCCcc----hhHH-HHHHHHhCCCEEEEEccCCCCCCCCC--------cccCCHH
Confidence 68999999986 3678999999998654 2222 35667779999999999997764332 2224578
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccc----c-------cc-------
Q 003878 601 DFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH----K-------FT------- 662 (789)
Q Consensus 601 D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~----~-------~~------- 662 (789)
|+.+++++|.++..+++++|+++|+|+||.+++.++.++|+ ++++|+.+|........ . ..
T Consensus 208 d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (422)
T 3k2i_A 208 YFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN-VSATVSINGSGISGNTAINYKHSSIPPLGYDLRRIKVA 286 (422)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS-EEEEEEESCCSBCCSSCEEETTEEECCCCBCGGGCEEC
T ss_pred HHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC-ccEEEEEcCcccccCCchhhcCCcCCCcccchhhcccC
Confidence 99999999999988899999999999999999999999998 89999888776432110 0 00
Q ss_pred -CC-ccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHH-HHHHHHHHHhhccC
Q 003878 663 -IG-HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHS-LKLLATMQYVLCTS 739 (789)
Q Consensus 663 -~~-~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~-~~~~~~L~~~~~~~ 739 (789)
.+ ..+...+..+... ...++...+.++ .+|+|+++|++|..+|+.+. ..+.++|++.
T Consensus 287 ~~~~~~~~~~~~~~~~~------~~~~~~~~~~~i----------~~P~Lii~G~~D~~vp~~~~~~~~~~~l~~~---- 346 (422)
T 3k2i_A 287 FSGLVDIVDIRNALVGG------YKNPSMIPIEKA----------QGPILLIVGQDDHNWRSELYAQTVSERLQAH---- 346 (422)
T ss_dssp TTSCEECTTCBCCCTTG------GGSTTBCCGGGC----------CSCEEEEEETTCSSSCHHHHHHHHHHHHHHT----
T ss_pred cchhHHHHHHHhhhhhc------ccccccccHHHC----------CCCEEEEEeCCCCCCCHHHHHHHHHHHHHhc----
Confidence 00 0001111122110 011122223333 67999999999999999866 5888899987
Q ss_pred CCCCCCCCc-EEEEEeCCCCcCCCCc--------------------------hhhHHHHHHHHHHHHHHHhCCC
Q 003878 740 LENSPQTNP-IIGRIERKAGHGVGLP--------------------------TQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 740 ~~~~~~~~~-~~l~~~~~~gH~~~~~--------------------------~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
+.+ +++.+++++||.+..+ .....+....+.+||.++|+..
T Consensus 347 ------g~~~~~l~~~~gagH~~~~p~~p~~~~~~~~~~~~~~~~gg~~~~~~~~~~~~~~~i~~Fl~~~L~~~ 414 (422)
T 3k2i_A 347 ------GKEKPQIICYPGTGHYIEPPYFPLCPASLHRLLNKHVIWGGEPRAHSKAQEDAWKQILAFFCKHLGGT 414 (422)
T ss_dssp ------TCCCCEEEEETTCCSCCCSTTCCCCCEEEETTTTEEEECCCCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred ------CCCCCEEEEECCCCCEECCCCCCcchhhhccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 777 8999999999997321 1223567788999999999753
No 43
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=99.82 E-value=6e-20 Score=186.90 Aligned_cols=214 Identities=14% Similarity=0.109 Sum_probs=156.0
Q ss_pred EEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhc
Q 003878 510 QVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKG 589 (789)
Q Consensus 510 ~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~ 589 (789)
.+.+++.|| .++.++++.|++ ++.|+||++||..+... .+. .....|+++||.|+++|+||.|..+..+...
T Consensus 5 ~~~~~~~~g-~~l~~~~~~p~~----~~~p~vv~~hG~~~~~~--~~~-~~~~~l~~~g~~v~~~d~~g~g~s~~~~~~~ 76 (236)
T 1zi8_A 5 GISIQSYDG-HTFGALVGSPAK----APAPVIVIAQDIFGVNA--FMR-ETVSWLVDQGYAAVCPDLYARQAPGTALDPQ 76 (236)
T ss_dssp TCCEECTTS-CEECEEEECCSS----CSEEEEEEECCTTBSCH--HHH-HHHHHHHHTTCEEEEECGGGGTSTTCBCCTT
T ss_pred eEEEecCCC-CeEEEEEECCCC----CCCCEEEEEcCCCCCCH--HHH-HHHHHHHhCCcEEEeccccccCCCccccccc
Confidence 345778899 999999998874 67899999999766532 233 3445566589999999999987654321100
Q ss_pred -----------ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccc
Q 003878 590 -----------GALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY 658 (789)
Q Consensus 590 -----------~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~ 658 (789)
..........+|+.+++++|.++...+ ++|+++|+|+||.+++.++.++| ++++++..|....
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~--- 150 (236)
T 1zi8_A 77 DERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSN-GKVGLVGYSLGGALAFLVASKGY--VDRAVGYYGVGLE--- 150 (236)
T ss_dssp CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTSSTTEE-EEEEEEEETHHHHHHHHHHHHTC--SSEEEEESCSSGG---
T ss_pred chhhhhhhhhhhhccCcchhhHHHHHHHHHHHhccCCC-CCEEEEEECcCHHHHHHHhccCC--ccEEEEecCcccc---
Confidence 001111234689999999998876544 69999999999999999999988 8888877763211
Q ss_pred ccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhcc
Q 003878 659 HKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCT 738 (789)
Q Consensus 659 ~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~ 738 (789)
++...+.+. .+|+|+++|.+|..|++.++.++++.++..
T Consensus 151 ----------------------------~~~~~~~~~----------~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--- 189 (236)
T 1zi8_A 151 ----------------------------KQLNKVPEV----------KHPALFHMGGQDHFVPAPSRQLITEGFGAN--- 189 (236)
T ss_dssp ----------------------------GCGGGGGGC----------CSCEEEEEETTCTTSCHHHHHHHHHHHTTC---
T ss_pred ----------------------------cchhhhhhc----------CCCEEEEecCCCCCCCHHHHHHHHHHHHhC---
Confidence 011223333 579999999999999999999999998764
Q ss_pred CCCCCCCCCcEEEEEeCCCCcCCCCchh------hHHHHHHHHHHHHHHHhCCC
Q 003878 739 SLENSPQTNPIIGRIERKAGHGVGLPTQ------KMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 739 ~~~~~~~~~~~~l~~~~~~gH~~~~~~~------~~~~~~~~~~~fl~~~l~~~ 786 (789)
+ ++++++++++||++..... ...+....+.+||.++++.+
T Consensus 190 -------~-~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~~~i~~fl~~~l~~~ 235 (236)
T 1zi8_A 190 -------P-LLQVHWYEEAGHSFARTGSSGYVASAAALANERTLDFLVPLQSRK 235 (236)
T ss_dssp -------T-TEEEEEETTCCTTTTCTTSTTCCHHHHHHHHHHHHHHHGGGCC--
T ss_pred -------C-CceEEEECCCCcccccCCCCccCHHHHHHHHHHHHHHHHHhcCCC
Confidence 4 7899999999998764321 12356678999999988753
No 44
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=99.82 E-value=1.3e-19 Score=197.69 Aligned_cols=244 Identities=14% Similarity=0.038 Sum_probs=165.9
Q ss_pred CCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCCh
Q 003878 505 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE 584 (789)
Q Consensus 505 ~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~ 584 (789)
.+..+.+.+++.|| .+++++++.|++ .+.++.|+||++||+.+.. ..+.......+.++||.|+++|+||.|....
T Consensus 65 ~~~~~~~~~~~~~g-~~~~~~~~~p~~-~~~~~~p~vv~~hG~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~ 140 (367)
T 2hdw_A 65 KVEHRKVTFANRYG-ITLAADLYLPKN-RGGDRLPAIVIGGPFGAVK--EQSSGLYAQTMAERGFVTLAFDPSYTGESGG 140 (367)
T ss_dssp TEEEEEEEEECTTS-CEEEEEEEEESS-CCSSCEEEEEEECCTTCCT--TSHHHHHHHHHHHTTCEEEEECCTTSTTSCC
T ss_pred CceeEEEEEecCCC-CEEEEEEEeCCC-CCCCCCCEEEEECCCCCcc--hhhHHHHHHHHHHCCCEEEEECCCCcCCCCC
Confidence 45678899999999 999999999987 3356789999999986543 2233224455556999999999999875432
Q ss_pred hHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccccc--
Q 003878 585 EWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFT-- 662 (789)
Q Consensus 585 ~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~-- 662 (789)
.... ........+|+.+++++|.++..+|+++++++|+|+||.+++.++.++| .++++|+.+|+. +.......
T Consensus 141 ~~~~---~~~~~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p-~~~~~v~~~p~~-~~~~~~~~~~ 215 (367)
T 2hdw_A 141 QPRN---VASPDINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK-RVKAVVTSTMYD-MTRVMSKGYN 215 (367)
T ss_dssp SSSS---CCCHHHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT-TCCEEEEESCCC-HHHHHHHTTT
T ss_pred cCcc---ccchhhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC-CccEEEEecccc-ccHHHhhhhc
Confidence 1110 0112345789999999999998888999999999999999999999998 588999888763 21100000
Q ss_pred --------------------------------------C-Ccc----chhhcC-----CC--------CcHHHHHHHHhc
Q 003878 663 --------------------------------------I-GHA----WVSDFG-----CS--------EEEEEFYWLIKY 686 (789)
Q Consensus 663 --------------------------------------~-~~~----~~~e~g-----~p--------~~~~~~~~l~~~ 686 (789)
. ... ....+. .| ........+..+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (367)
T 2hdw_A 216 DSVTLEQRTRTLEQLGQQRWKDAESGTPAYQPPYNELKGGEAQFLVDYHDYYMTPRGYHPRAVNSGNAWTMTTPLSFMNM 295 (367)
T ss_dssp TCCCHHHHHHHHHHHHHHHHHHHHHTSCCBCSCTTCCCSCCCHHHHHHHHHHTSTTTCCTTCSTTTCCCBTTTHHHHTTS
T ss_pred cccchHHHHHHHHHHHHHHHHHhccCCceeecCCCccccccccccCCccceeecccccCcccccccchhhhhhHHHhcCC
Confidence 0 000 000000 00 000112334455
Q ss_pred CcccCCCCCCCCCCCCCCCC-CeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCch
Q 003878 687 SPLHNVRRPWEQNPDKPFQY-PSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT 765 (789)
Q Consensus 687 sP~~~v~~~~~~~~~~~~~~-pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~ 765 (789)
+|...+.++ . +|+|+++|++|. ++.++.+++++ . +.++++++++++||......
T Consensus 296 ~~~~~~~~i----------~~~PvLii~G~~D~--~~~~~~~~~~~---~----------~~~~~~~~~~g~gH~~~~~~ 350 (367)
T 2hdw_A 296 PILTYIKEI----------SPRPILLIHGERAH--SRYFSETAYAA---A----------AEPKELLIVPGASHVDLYDR 350 (367)
T ss_dssp CSCTTGGGG----------TTSCEEEEEETTCT--THHHHHHHHHH---S----------CSSEEEEEETTCCTTHHHHC
T ss_pred ChhHhHHhh----------cCCceEEEecCCCC--CHHHHHHHHHh---C----------CCCeeEEEeCCCCeeeeecC
Confidence 666666654 5 899999999998 77887777665 4 67899999999999843211
Q ss_pred hhHHHHHHHHHHHHHHHh
Q 003878 766 QKMIDEAADRYGFMAKML 783 (789)
Q Consensus 766 ~~~~~~~~~~~~fl~~~l 783 (789)
... .....+.+||.++|
T Consensus 351 ~~~-~~~~~i~~fl~~~l 367 (367)
T 2hdw_A 351 LDR-IPFDRIAGFFDEHL 367 (367)
T ss_dssp TTT-SCHHHHHHHHHHHC
T ss_pred chh-HHHHHHHHHHHhhC
Confidence 111 14667889998875
No 45
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=99.82 E-value=1.5e-18 Score=178.93 Aligned_cols=209 Identities=15% Similarity=0.090 Sum_probs=159.2
Q ss_pred EEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCC---CCCHHHHHHHHcCCeEEEEEeecCCCCCChhH
Q 003878 510 QVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP---SFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 586 (789)
Q Consensus 510 ~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~---~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~ 586 (789)
++.+++.+| +|.++++.|++ ++.|+||++||..+..... .+. .....|.++||.|+++|+||.|.....+
T Consensus 25 ~~~~~~~~g--~l~~~~~~p~~----~~~p~vv~~HG~~~~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g~G~s~~~~ 97 (249)
T 2i3d_A 25 EVIFNGPAG--RLEGRYQPSKE----KSAPIAIILHPHPQFGGTMNNQIVY-QLFYLFQKRGFTTLRFNFRSIGRSQGEF 97 (249)
T ss_dssp EEEEEETTE--EEEEEEECCSS----TTCCEEEEECCCGGGTCCTTSHHHH-HHHHHHHHTTCEEEEECCTTSTTCCSCC
T ss_pred EEEEECCCc--eEEEEEEcCCC----CCCCEEEEECCCcccCCCccchHHH-HHHHHHHHCCCEEEEECCCCCCCCCCCC
Confidence 888998887 79998887764 5679999999964332221 122 3445566699999999999977543221
Q ss_pred HhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCcc
Q 003878 587 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHA 666 (789)
Q Consensus 587 ~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~ 666 (789)
......++|+.+++++|.+++. ++++++++|+|+||.+++.++.++|+ ++++|+..|..++..
T Consensus 98 ------~~~~~~~~d~~~~i~~l~~~~~-~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~--------- 160 (249)
T 2i3d_A 98 ------DHGAGELSDAASALDWVQSLHP-DSKSCWVAGYSFGAWIGMQLLMRRPE-IEGFMSIAPQPNTYD--------- 160 (249)
T ss_dssp ------CSSHHHHHHHHHHHHHHHHHCT-TCCCEEEEEETHHHHHHHHHHHHCTT-EEEEEEESCCTTTSC---------
T ss_pred ------CCccchHHHHHHHHHHHHHhCC-CCCeEEEEEECHHHHHHHHHHhcCCC-ccEEEEEcCchhhhh---------
Confidence 1223446999999999998854 78899999999999999999999998 999999998765311
Q ss_pred chhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCC
Q 003878 667 WVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT 746 (789)
Q Consensus 667 ~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 746 (789)
...+... ..|+|+++|.+|..+++.++.++++++... .+
T Consensus 161 ----------------------~~~~~~~----------~~P~lii~G~~D~~~~~~~~~~~~~~~~~~---------~~ 199 (249)
T 2i3d_A 161 ----------------------FSFLAPC----------PSSGLIINGDADKVAPEKDVNGLVEKLKTQ---------KG 199 (249)
T ss_dssp ----------------------CTTCTTC----------CSCEEEEEETTCSSSCHHHHHHHHHHHTTS---------TT
T ss_pred ----------------------hhhhccc----------CCCEEEEEcCCCCCCCHHHHHHHHHHHhhc---------cC
Confidence 1122233 579999999999999999999999998752 15
Q ss_pred CcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCC
Q 003878 747 NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 747 ~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
..+++.+++++||.+.. . ..+....+.+||.++++..
T Consensus 200 ~~~~~~~~~g~~H~~~~-~--~~~~~~~i~~fl~~~l~~~ 236 (249)
T 2i3d_A 200 ILITHRTLPGANHFFNG-K--VDELMGECEDYLDRRLNGE 236 (249)
T ss_dssp CCEEEEEETTCCTTCTT-C--HHHHHHHHHHHHHHHHTTC
T ss_pred CceeEEEECCCCccccc-C--HHHHHHHHHHHHHHhcCCC
Confidence 68899999999999863 2 2466778999999988643
No 46
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=99.82 E-value=2.8e-19 Score=179.83 Aligned_cols=215 Identities=15% Similarity=0.121 Sum_probs=156.5
Q ss_pred CCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCCh
Q 003878 505 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE 584 (789)
Q Consensus 505 ~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~ 584 (789)
.+..+.+.+++ +| .+|.++++.|++ +.|+||++||+.+....+.+. .....|.++||.|+.+|+||.|....
T Consensus 9 ~~~~~~~~~~~-~g-~~l~~~~~~p~~-----~~p~vv~~hG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~g~g~s~~ 80 (223)
T 2o2g_A 9 QPQEYAVSVSV-GE-VKLKGNLVIPNG-----ATGIVLFAHGSGSSRYSPRNR-YVAEVLQQAGLATLLIDLLTQEEEEI 80 (223)
T ss_dssp CCCEEEEEEEE-TT-EEEEEEEECCTT-----CCEEEEEECCTTCCTTCHHHH-HHHHHHHHHTCEEEEECSSCHHHHHH
T ss_pred CceeeEEEEec-CC-eEEEEEEecCCC-----CceEEEEecCCCCCCCccchH-HHHHHHHHCCCEEEEEcCCCcCCCCc
Confidence 45678888887 89 999999998874 579999999987654433332 24455655899999999998653221
Q ss_pred hHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCC
Q 003878 585 EWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG 664 (789)
Q Consensus 585 ~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~ 664 (789)
..........-....+|+.++++++..++.+|+++++++|+|+||.+++.++.++|++++++|+..|..++..
T Consensus 81 ~~~~~~~~~~~~~~~~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~~------- 153 (223)
T 2o2g_A 81 DLRTRHLRFDIGLLASRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPETVQAVVSRGGRPDLAP------- 153 (223)
T ss_dssp HHHHCSSTTCHHHHHHHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCGGGCT-------
T ss_pred cchhhcccCcHHHHHHHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCCceEEEEEeCCCCCcCH-------
Confidence 1111000011122357889999999998888999999999999999999999999999999999988654210
Q ss_pred ccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCC
Q 003878 665 HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSP 744 (789)
Q Consensus 665 ~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~ 744 (789)
..+.+. ..|+|+++|.+|..+|.. . .+.+++.
T Consensus 154 -------------------------~~~~~~----------~~P~l~i~g~~D~~~~~~-~---~~~~~~~--------- 185 (223)
T 2o2g_A 154 -------------------------SALPHV----------KAPTLLIVGGYDLPVIAM-N---EDALEQL--------- 185 (223)
T ss_dssp -------------------------TTGGGC----------CSCEEEEEETTCHHHHHH-H---HHHHHHC---------
T ss_pred -------------------------HHHhcC----------CCCEEEEEccccCCCCHH-H---HHHHHhh---------
Confidence 112222 579999999999988633 2 3445554
Q ss_pred CCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 745 QTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 745 ~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
+.++++.+++++||.+..+.. ..+....+.+||.++|+
T Consensus 186 -~~~~~~~~~~~~~H~~~~~~~-~~~~~~~i~~fl~~~l~ 223 (223)
T 2o2g_A 186 -QTSKRLVIIPRASHLFEEPGA-LTAVAQLASEWFMHYLR 223 (223)
T ss_dssp -CSSEEEEEETTCCTTCCSTTH-HHHHHHHHHHHHHHHCC
T ss_pred -CCCeEEEEeCCCCcccCChHH-HHHHHHHHHHHHHHhcC
Confidence 567899999999999765433 24677789999998874
No 47
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=99.82 E-value=7.1e-19 Score=197.93 Aligned_cols=223 Identities=15% Similarity=0.092 Sum_probs=157.2
Q ss_pred EEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHH
Q 003878 521 KIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFD 600 (789)
Q Consensus 521 ~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~ 600 (789)
.|+++++.|++ .++.|+||++||+.+.. +.. ...+|+++||+|+++|+||.++.+.. ......+
T Consensus 160 ~l~~~l~~P~~---~~~~P~Vv~lhG~~~~~----~~~-~a~~La~~Gy~Vla~D~rG~~~~~~~--------~~~~~~~ 223 (446)
T 3hlk_A 160 RVRGTLFLPPE---PGPFPGIVDMFGTGGGL----LEY-RASLLAGKGFAVMALAYYNYEDLPKT--------METLHLE 223 (446)
T ss_dssp TEEEEEEECSS---SCCBCEEEEECCSSCSC----CCH-HHHHHHTTTCEEEEECCSSSTTSCSC--------CSEEEHH
T ss_pred eEEEEEEeCCC---CCCCCEEEEECCCCcch----hhH-HHHHHHhCCCEEEEeccCCCCCCCcc--------hhhCCHH
Confidence 58999999986 36789999999986542 222 35667779999999999997765422 1224589
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc-----------cc-------
Q 003878 601 DFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-----------FT------- 662 (789)
Q Consensus 601 D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~-----------~~------- 662 (789)
|+.+++++|.++..+|+++|+++|+|+||.+++.++.++|+ ++++|+.+|......... ..
T Consensus 224 d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~-v~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (446)
T 3hlk_A 224 YFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG-ITAAVVINGSVANVGGTLRYKGETLPPVGVNRNRIKVT 302 (446)
T ss_dssp HHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC-EEEEEEESCCSBCCSSEEEETTEEECCCCBCGGGCEEC
T ss_pred HHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC-ceEEEEEcCcccccCCCccccCccCCccccchhccccc
Confidence 99999999999988899999999999999999999999998 889888888654321100 00
Q ss_pred -CC-ccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHH-HHHHHHHHHhhccC
Q 003878 663 -IG-HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHS-LKLLATMQYVLCTS 739 (789)
Q Consensus 663 -~~-~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~-~~~~~~L~~~~~~~ 739 (789)
.+ ..+...+..+.... .......+.++ .+|+|+++|++|..+|+.+. ..+.++|++.
T Consensus 303 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~i----------~~PvLii~G~~D~~vp~~~~~~~~~~~l~~~---- 362 (446)
T 3hlk_A 303 KDGYADIVDVLNSPLEGP------DQKSFIPVERA----------ESTFLFLVGQDDHNWKSEFYANEACKRLQAH---- 362 (446)
T ss_dssp SSSCEECTTCBCCTTSGG------GGGGBCCGGGC----------CSEEEEEEETTCCSSCHHHHHHHHHHHHHHT----
T ss_pred cchHHHHHHHHhchhhcc------ccccccCHHHC----------CCCEEEEEeCCCCCcChHHHHHHHHHHHHHc----
Confidence 00 00111122221110 00111123333 58999999999999999555 6888899987
Q ss_pred CCCCCCCCc-EEEEEeCCCCcCCCC--------------------------chhhHHHHHHHHHHHHHHHhCCC
Q 003878 740 LENSPQTNP-IIGRIERKAGHGVGL--------------------------PTQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 740 ~~~~~~~~~-~~l~~~~~~gH~~~~--------------------------~~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
+.+ +++.+++++||.+.. ......+....+.+||.++|+..
T Consensus 363 ------g~~~~~l~~~pgagH~~~~p~~P~~~~~~~~~~~~~~~~gG~~~~~~~a~~~~~~~i~~Fl~~~L~~~ 430 (446)
T 3hlk_A 363 ------GRRKPQIICYPETGHYIEPPYFPLCRASLHALVGSPIIWGGEPRAHAMAQVDAWKQLQTFFHKHLGGH 430 (446)
T ss_dssp ------TCCCCEEEEETTBCSCCCSTTCCCCCBC-------CBBCCBCHHHHHHHHHHHHHHHHHHHHHHC---
T ss_pred ------CCCCcEEEEECCCCCeECCCCCCCChhhcccccCceEeeCCccHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 777 899999999999831 11123567788999999999753
No 48
>4b6g_A Putative esterase; hydrolase, formaldehyde detoxification, alpha/beta serine HY; 1.40A {Neisseria meningitidis MC58}
Probab=99.82 E-value=2.5e-20 Score=196.21 Aligned_cols=246 Identities=10% Similarity=0.058 Sum_probs=159.7
Q ss_pred EEEEEEec-CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEee--cCCCCC--
Q 003878 508 VHQVFVPS-KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANI--RGGGEY-- 582 (789)
Q Consensus 508 ~~~~~~~s-~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--RG~g~~-- 582 (789)
.+.+.+.+ .+| .++++.++.|++.. .++.|+||++||+.+.............+++++|++|+++|. ||.+..
T Consensus 22 ~~~~~~~s~~~~-~~~~~~v~~P~~~~-~~~~p~vv~lHG~~~~~~~~~~~~~~~~~~~~~g~~vv~~d~~~rg~~~~~~ 99 (283)
T 4b6g_A 22 QQVWAHHAQTLQ-CEMKFAVYLPNNPE-NRPLGVIYWLSGLTCTEQNFITKSGFQRYAAEHQVIVVAPDTSPRGEQVPND 99 (283)
T ss_dssp EEEEEEEETTTT-EEEEEEEEECCCTT-CCCEEEEEEECCTTCCSHHHHHHSCTHHHHHHHTCEEEEECSSCCSTTSCCC
T ss_pred EEEEEEechhhC-CceEEEEEeCCCCC-CCCCCEEEEEcCCCCCccchhhcccHHHHHhhCCeEEEEecccccccccccc
Confidence 34444444 578 99999999999864 578999999999876543211001124566668999999995 454322
Q ss_pred -------ChhHHhcccccC--CcchHHHH-HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 583 -------GEEWHKGGALAK--KQNCFDDF-ISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 583 -------g~~~~~~~~~~~--~~~~~~D~-~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
|..|+....... ....+.++ ...+..+++..+.+++|++|+|+|+||++++.++.++|++|+++++.+|+
T Consensus 100 ~~~~~G~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~G~S~GG~~a~~~a~~~p~~~~~~~~~s~~ 179 (283)
T 4b6g_A 100 DAYDLGQSAGFYLNATEQPWAANYQMYDYILNELPRLIEKHFPTNGKRSIMGHSMGGHGALVLALRNQERYQSVSAFSPI 179 (283)
T ss_dssp SSTTSBTTBCTTSBCCSTTGGGTCBHHHHHHTHHHHHHHHHSCEEEEEEEEEETHHHHHHHHHHHHHGGGCSCEEEESCC
T ss_pred ccccccCCCcccccCccCcccchhhHHHHHHHHHHHHHHHhCCCCCCeEEEEEChhHHHHHHHHHhCCccceeEEEECCc
Confidence 222222211110 11122333 32333333333446789999999999999999999999999999999998
Q ss_pred ccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcH-HHHHHHHH
Q 003878 653 MDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPL-HSLKLLAT 731 (789)
Q Consensus 653 ~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~-~~~~~~~~ 731 (789)
+++..... . ...+...+|.. ++. +..++|...+... ...||+|++||+.|..|+.. ++.+++++
T Consensus 180 ~~~~~~~~-~-~~~~~~~~g~~--~~~---~~~~~~~~~~~~~--------~~~~p~li~~G~~D~~~~~~~~~~~~~~~ 244 (283)
T 4b6g_A 180 LSPSLVPW-G-EKAFTAYLGKD--REK---WQQYDANSLIQQG--------YKVQGMRIDQGLEDEFLPTQLRTEDFIET 244 (283)
T ss_dssp CCGGGSHH-H-HHHHHHHHCSC--GGG---GGGGCHHHHHHHT--------CCCSCCEEEEETTCTTHHHHTCHHHHHHH
T ss_pred cccccCcc-h-hhhHHhhcCCc--hHH---HHhcCHHHHHHhc--------ccCCCEEEEecCCCccCcchhhHHHHHHH
Confidence 88643210 0 00111223321 111 1234454444332 12579999999999999862 28999999
Q ss_pred HHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 732 MQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 732 L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
|++. |.++++.++++++|.+. .......+.+.|+.++|+
T Consensus 245 l~~~----------g~~~~~~~~~g~~H~~~----~~~~~l~~~l~~~~~~l~ 283 (283)
T 4b6g_A 245 CRAA----------NQPVDVRFHKGYDHSYY----FIASFIGEHIAYHAAFLK 283 (283)
T ss_dssp HHHH----------TCCCEEEEETTCCSSHH----HHHHHHHHHHHHHHTTCC
T ss_pred HHHc----------CCCceEEEeCCCCcCHh----HHHHHHHHHHHHHHHhcC
Confidence 9998 89999999999999863 223566788999988764
No 49
>1jkm_A Brefeldin A esterase; serine hydrolase, degradation of brefeldin A, alpha/beta hydrolase family; 1.85A {Bacillus subtilis} SCOP: c.69.1.2
Probab=99.81 E-value=7.1e-19 Score=192.35 Aligned_cols=246 Identities=15% Similarity=0.119 Sum_probs=165.1
Q ss_pred CCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCC---CCCHHHHHHHHcCCeEEEEEeecCCCC
Q 003878 505 EFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP---SFSVSRTILMRHLGAVFCIANIRGGGE 581 (789)
Q Consensus 505 ~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~---~~~~~~~~~l~~~G~~v~~~~~RG~g~ 581 (789)
.+..+.+.+++.+| ..|.+.++.|++. .++.|+||++|||....... .|.. ....|+++|++|+.+|+||+|+
T Consensus 79 ~~~~~~~~~~~~~g-~~l~~~v~~p~~~--~~~~p~vv~iHGgg~~~g~~~~~~~~~-~~~~la~~g~~vv~~d~r~~gg 154 (361)
T 1jkm_A 79 DVETSTETILGVDG-NEITLHVFRPAGV--EGVLPGLVYTHGGGMTILTTDNRVHRR-WCTDLAAAGSVVVMVDFRNAWT 154 (361)
T ss_dssp CEEEEEEEEECTTS-CEEEEEEEEETTC--CSCEEEEEEECCSTTTSSCSSSHHHHH-HHHHHHHTTCEEEEEECCCSEE
T ss_pred CceeeeeeeecCCC-CeEEEEEEeCCCC--CCCCeEEEEEcCCccccCCCcccchhH-HHHHHHhCCCEEEEEecCCCCC
Confidence 35567788888899 8999999999863 23789999999986332222 2332 3344444999999999999874
Q ss_pred CChhHHhcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHh-----CCCceeEEEecCCcc
Q 003878 582 YGEEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ-----RPDLFGCALAHVGVM 653 (789)
Q Consensus 582 ~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~-----~pd~f~a~v~~~p~~ 653 (789)
+.. .......+.|+.++++|+.++- ..| +|+++|+|+||.+++.++.+ .|++++++|+.+|++
T Consensus 155 ~~~-------~~~~~~~~~D~~~~~~~v~~~~~~~~~~--~i~l~G~S~Gg~~a~~~a~~~~~~~~p~~i~~~il~~~~~ 225 (361)
T 1jkm_A 155 AEG-------HHPFPSGVEDCLAAVLWVDEHRESLGLS--GVVVQGESGGGNLAIATTLLAKRRGRLDAIDGVYASIPYI 225 (361)
T ss_dssp TTE-------ECCTTHHHHHHHHHHHHHHHTHHHHTEE--EEEEEEETHHHHHHHHHHHHHHHTTCGGGCSEEEEESCCC
T ss_pred CCC-------CCCCCccHHHHHHHHHHHHhhHHhcCCC--eEEEEEECHHHHHHHHHHHHHHhcCCCcCcceEEEECCcc
Confidence 421 1223456799999999998762 234 99999999999999999988 888999999999998
Q ss_pred ccccccc----ccCCccchhhcCCC-CcHHHHHH-HH------------hcCcccCCCCCCCCCCCCCCCCCeEEEEecC
Q 003878 654 DMLRYHK----FTIGHAWVSDFGCS-EEEEEFYW-LI------------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD 715 (789)
Q Consensus 654 d~~~~~~----~~~~~~~~~e~g~p-~~~~~~~~-l~------------~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~ 715 (789)
+...... ......+ .++..+ ........ +. ..+|........ ...+|+||++|+
T Consensus 226 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l-------~~l~P~Lii~G~ 297 (361)
T 1jkm_A 226 SGGYAWDHERRLTELPSL-VENDGYFIENGGMALLVRAYDPTGEHAEDPIAWPYFASEDEL-------RGLPPFVVAVNE 297 (361)
T ss_dssp CCCTTSCHHHHHHHCTHH-HHTTTSSSCHHHHHHHHHHHSSSSTTTTCTTTCGGGCCHHHH-------TTCCCEEEEEET
T ss_pred ccccccccccccccCcch-hhccCcccCHHHHHHHHHHhCCCCCCCCCcccCccccChhhH-------cCCCceEEEEcC
Confidence 8721100 0000001 011111 11111111 11 123331100000 124699999999
Q ss_pred CCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCC-Cc---hhhH-HHHHHHHHHHHHHHh
Q 003878 716 HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVG-LP---TQKM-IDEAADRYGFMAKML 783 (789)
Q Consensus 716 ~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~-~~---~~~~-~~~~~~~~~fl~~~l 783 (789)
+|..++ ++.+++++|++. |.++++++++++||++. .. ..+. .+..+.+.+||.++.
T Consensus 298 ~D~~~~--~~~~~~~~l~~~----------g~~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~i~~fl~~~~ 358 (361)
T 1jkm_A 298 LDPLRD--EGIAFARRLARA----------GVDVAARVNIGLVHGADVIFRHWLPAALESTVRDVAGFAADRA 358 (361)
T ss_dssp TCTTHH--HHHHHHHHHHHT----------TCCEEEEEETTCCTTHHHHSGGGCHHHHHHHHHHHHHHHHHHH
T ss_pred cCcchh--hHHHHHHHHHHc----------CCCEEEEEeCCCccCccccccccccHHHHHHHHHHHHHHHHhh
Confidence 999887 889999999987 88999999999999875 21 1222 456778899998764
No 50
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=99.81 E-value=4.9e-19 Score=186.38 Aligned_cols=234 Identities=15% Similarity=0.149 Sum_probs=164.3
Q ss_pred cEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhH
Q 003878 507 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 586 (789)
Q Consensus 507 ~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~ 586 (789)
..+.+.+++ +| .+|.++++.|+ +.|+||++||+.+... .|.. +...|.++||.|+.+|+||.|+.....
T Consensus 5 ~~~~~~~~~-~g-~~l~~~~~~p~------~~p~vv~~HG~~~~~~--~~~~-~~~~l~~~g~~v~~~d~~G~g~s~~~~ 73 (290)
T 3ksr_A 5 KLSSIEIPV-GQ-DELSGTLLTPT------GMPGVLFVHGWGGSQH--HSLV-RAREAVGLGCICMTFDLRGHEGYASMR 73 (290)
T ss_dssp EEEEEEEEE-TT-EEEEEEEEEEE------SEEEEEEECCTTCCTT--TTHH-HHHHHHTTTCEEECCCCTTSGGGGGGT
T ss_pred ceeeEEecC-CC-eEEEEEEecCC------CCcEEEEeCCCCCCcC--cHHH-HHHHHHHCCCEEEEeecCCCCCCCCCc
Confidence 356677776 78 99999999987 6799999999876533 3433 455666689999999999987654321
Q ss_pred HhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccC---
Q 003878 587 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTI--- 663 (789)
Q Consensus 587 ~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~--- 663 (789)
.. .......+|+.+++++|.+++.+|+++|+++|+|+||.+++.++.++| .+++++.+|............
T Consensus 74 ~~----~~~~~~~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~--~~~~~l~~p~~~~~~~~~~~~~~~ 147 (290)
T 3ksr_A 74 QS----VTRAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP--VEWLALRSPALYKDAHWDQPKVSL 147 (290)
T ss_dssp TT----CBHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC--CSEEEEESCCCCCSSCTTSBHHHH
T ss_pred cc----ccHHHHHHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC--CCEEEEeCcchhhhhhhhcccccc
Confidence 11 111234689999999999988889999999999999999999999988 677777777665432221100
Q ss_pred --CccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCC
Q 003878 664 --GHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLE 741 (789)
Q Consensus 664 --~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~ 741 (789)
...+...+..+..... .++...+.+. .+|+|+++|.+|..|++.++.++++.++..
T Consensus 148 ~~~~~~~~~~~~~~~~~~------~~~~~~~~~~----------~~P~lii~G~~D~~v~~~~~~~~~~~~~~~------ 205 (290)
T 3ksr_A 148 NADPDLMDYRRRALAPGD------NLALAACAQY----------KGDVLLVEAENDVIVPHPVMRNYADAFTNA------ 205 (290)
T ss_dssp HHSTTHHHHTTSCCCGGG------CHHHHHHHHC----------CSEEEEEEETTCSSSCHHHHHHHHHHTTTS------
T ss_pred cCChhhhhhhhhhhhhcc------ccHHHHHHhc----------CCCeEEEEecCCcccChHHHHHHHHHhccC------
Confidence 0000001111111000 0111122223 579999999999999999999999988764
Q ss_pred CCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 742 NSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 742 ~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
+ ++++.+++++||.+..... .......+.+||.++++.
T Consensus 206 ----~-~~~~~~~~~~gH~~~~~~~-~~~~~~~i~~fl~~~~~~ 243 (290)
T 3ksr_A 206 ----R-SLTSRVIAGADHALSVKEH-QQEYTRALIDWLTEMVVG 243 (290)
T ss_dssp ----S-EEEEEEETTCCTTCCSHHH-HHHHHHHHHHHHHHHHHT
T ss_pred ----C-CceEEEcCCCCCCCCcchH-HHHHHHHHHHHHHHHhcC
Confidence 4 7899999999998765433 246677889999998754
No 51
>2uz0_A Esterase, tributyrin esterase; alpha/beta hydrolase, hydrolase, A virulence facto LUNG infection; HET: MSE; 1.7A {Streptococcus pneumoniae}
Probab=99.80 E-value=1.3e-19 Score=187.99 Aligned_cols=244 Identities=11% Similarity=-0.004 Sum_probs=160.6
Q ss_pred CcEEEEEEec-CCCceEEEEEEEecCCCC----CCCCccEEEEEcCCCCccCCCCCCH--HHHHHHHcCCeEEEEEeecC
Q 003878 506 FHVHQVFVPS-KDGSTKIPMFIVSKKNIK----LDGSHPCLLYGYGGFNISVTPSFSV--SRTILMRHLGAVFCIANIRG 578 (789)
Q Consensus 506 ~~~~~~~~~s-~dg~~~i~~~l~~p~~~~----~~~~~P~ll~~hGg~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~RG 578 (789)
+..+.+.+.+ ..| .++++.++.|++.. ++++.|+||++||+.+... .|.. ....++++.|++|+.+++|+
T Consensus 5 m~~~~~~~~s~~~~-~~~~~~v~~P~~~~~~~~~~~~~p~vv~~HG~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~~~ 81 (263)
T 2uz0_A 5 PAVMKIEYYSQVLD-MEWGVNVLYPDANRVEEPECEDIPVLYLLHGMSGNHN--SWLKRTNVERLLRGTNLIVVMPNTSN 81 (263)
T ss_dssp CEEEEEEEEETTTT-EEEEEEEEECC---------CCBCEEEEECCTTCCTT--HHHHHSCHHHHTTTCCCEEEECCCTT
T ss_pred ceEeEEEEechhhC-CceeEEEEeCCCccccCCcCCCCCEEEEECCCCCCHH--HHHhccCHHHHHhcCCeEEEEECCCC
Confidence 4556677765 468 89999999999752 3578899999999876533 2222 23456666899999999987
Q ss_pred CCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccc
Q 003878 579 GGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY 658 (789)
Q Consensus 579 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~ 658 (789)
++..... . + ........+|+.+.++.+..+..+|+++++++|+|+||++++.++. +|++|+++|+.+|..++...
T Consensus 82 ~~~~~~~--~-~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~-~~~~~~~~v~~~~~~~~~~~ 156 (263)
T 2uz0_A 82 GWYTDTQ--Y-G-FDYYTALAEELPQVLKRFFPNMTSKREKTFIAGLSMGGYGCFKLAL-TTNRFSHAASFSGALSFQNF 156 (263)
T ss_dssp STTSBCT--T-S-CBHHHHHHTHHHHHHHHHCTTBCCCGGGEEEEEETHHHHHHHHHHH-HHCCCSEEEEESCCCCSSSC
T ss_pred CccccCC--C-c-ccHHHHHHHHHHHHHHHHhccccCCCCceEEEEEChHHHHHHHHHh-CccccceEEEecCCcchhhc
Confidence 6532110 0 0 0000111244555555544323468899999999999999999998 89999999999999886542
Q ss_pred cccc---CC-ccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHH
Q 003878 659 HKFT---IG-HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQY 734 (789)
Q Consensus 659 ~~~~---~~-~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~ 734 (789)
.... .. ..+...++.+... .+..++|...+.+. ...+|+|++||++|..|+ ++.+++++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~--------~~~~p~li~~G~~D~~v~--~~~~~~~~l~~ 222 (263)
T 2uz0_A 157 SPESQNLGSPAYWRGVFGEIRDW----TTSPYSLESLAKKS--------DKKTKLWAWCGEQDFLYE--ANNLAVKNLKK 222 (263)
T ss_dssp CGGGTTCSCHHHHHHHHCCCSCT----TTSTTSHHHHGGGC--------CSCSEEEEEEETTSTTHH--HHHHHHHHHHH
T ss_pred cccccccccchhHHHHcCChhhh----ccccCCHHHHHHhc--------cCCCeEEEEeCCCchhhH--HHHHHHHHHHH
Confidence 2100 00 0111123332211 12344555555543 113899999999999884 57899999998
Q ss_pred hhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCC
Q 003878 735 VLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
. |.++++.++++ ||.+.. ..+....+++||.++++..
T Consensus 223 ~----------g~~~~~~~~~g-~H~~~~----~~~~~~~~~~~l~~~l~~~ 259 (263)
T 2uz0_A 223 L----------GFDVTYSHSAG-THEWYY----WEKQLEVFLTTLPIDFKLE 259 (263)
T ss_dssp T----------TCEEEEEEESC-CSSHHH----HHHHHHHHHHHSSSCCCCC
T ss_pred C----------CCCeEEEECCC-CcCHHH----HHHHHHHHHHHHHhhccch
Confidence 7 88999999998 997631 2356678899999888765
No 52
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=99.80 E-value=8.1e-19 Score=181.14 Aligned_cols=235 Identities=13% Similarity=0.112 Sum_probs=154.5
Q ss_pred EEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcc
Q 003878 511 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG 590 (789)
Q Consensus 511 ~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~ 590 (789)
+.++ .|| .+|.++++.|++. .++.|+||++||..+......|.. ....|.++||.|+.+|+||.|........
T Consensus 4 ~~~~-~~g-~~l~~~~~~p~~~--~~~~p~vvl~HG~~~~~~~~~~~~-~~~~l~~~g~~vi~~D~~G~G~S~~~~~~-- 76 (251)
T 2wtm_A 4 MYID-CDG-IKLNAYLDMPKNN--PEKCPLCIIIHGFTGHSEERHIVA-VQETLNEIGVATLRADMYGHGKSDGKFED-- 76 (251)
T ss_dssp EEEE-ETT-EEEEEEEECCTTC--CSSEEEEEEECCTTCCTTSHHHHH-HHHHHHHTTCEEEEECCTTSTTSSSCGGG--
T ss_pred eEEe-cCC-cEEEEEEEccCCC--CCCCCEEEEEcCCCcccccccHHH-HHHHHHHCCCEEEEecCCCCCCCCCcccc--
Confidence 4454 488 9999999988752 356799999999766522223333 34455558999999999998864322110
Q ss_pred cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc----------
Q 003878 591 ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK---------- 660 (789)
Q Consensus 591 ~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~---------- 660 (789)
.......+|+.+++++|.+...+ ++++++|||+||.+++.++.++|++++++|+..|...+.....
T Consensus 77 --~~~~~~~~d~~~~~~~l~~~~~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 152 (251)
T 2wtm_A 77 --HTLFKWLTNILAVVDYAKKLDFV--TDIYMAGHSQGGLSVMLAAAMERDIIKALIPLSPAAMIPEIARTGELLGLKFD 152 (251)
T ss_dssp --CCHHHHHHHHHHHHHHHTTCTTE--EEEEEEEETHHHHHHHHHHHHTTTTEEEEEEESCCTTHHHHHHHTEETTEECB
T ss_pred --CCHHHHHHHHHHHHHHHHcCccc--ceEEEEEECcchHHHHHHHHhCcccceEEEEECcHHHhHHHHhhhhhccccCC
Confidence 01112357888888888765333 4899999999999999999999999999999988754321100
Q ss_pred -ccCCccchhhc-CCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhcc
Q 003878 661 -FTIGHAWVSDF-GCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCT 738 (789)
Q Consensus 661 -~~~~~~~~~e~-g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~ 738 (789)
..... ....+ +.......+..+..+++...+.++ ..|+|+++|++|..||+..+.++.+.+.
T Consensus 153 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----------~~P~lii~G~~D~~v~~~~~~~~~~~~~----- 216 (251)
T 2wtm_A 153 PENIPD-ELDAWDGRKLKGNYVRVAQTIRVEDFVDKY----------TKPVLIVHGDQDEAVPYEASVAFSKQYK----- 216 (251)
T ss_dssp TTBCCS-EEEETTTEEEETHHHHHHTTCCHHHHHHHC----------CSCEEEEEETTCSSSCHHHHHHHHHHSS-----
T ss_pred chhcch-HHhhhhccccchHHHHHHHccCHHHHHHhc----------CCCEEEEEeCCCCCcChHHHHHHHHhCC-----
Confidence 00000 00011 100111122222233333333333 5799999999999999999888766543
Q ss_pred CCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 739 SLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 739 ~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
..++.+++++||.. ... ..+....+.+||.+++.
T Consensus 217 ---------~~~~~~~~~~gH~~-~~~--~~~~~~~i~~fl~~~~~ 250 (251)
T 2wtm_A 217 ---------NCKLVTIPGDTHCY-DHH--LELVTEAVKEFMLEQIA 250 (251)
T ss_dssp ---------SEEEEEETTCCTTC-TTT--HHHHHHHHHHHHHHHHC
T ss_pred ---------CcEEEEECCCCccc-chh--HHHHHHHHHHHHHHhcc
Confidence 35889999999998 432 24677889999988764
No 53
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=99.80 E-value=2.4e-19 Score=190.87 Aligned_cols=213 Identities=11% Similarity=0.094 Sum_probs=151.7
Q ss_pred EEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCC-CCCHHHHHHHHcCCeEEEEEeecCCCCCChhH
Q 003878 508 VHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-SFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 586 (789)
Q Consensus 508 ~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~ 586 (789)
...+.+. + ..+++.++.|++. .++.|+||++|||....... .+.. ....|.++||+|+.+|+||.++..
T Consensus 58 ~~~i~y~---~-~~~~~~~~~p~~~--~~~~p~vv~~HGgg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~r~~~~~~--- 127 (303)
T 4e15_A 58 VDHLRYG---E-GRQLVDVFYSEKT--TNQAPLFVFVHGGYWQEMDMSMSCS-IVGPLVRRGYRVAVMDYNLCPQVT--- 127 (303)
T ss_dssp EEEEECS---S-TTCEEEEEECTTC--CTTCCEEEEECCSTTTSCCGGGSCT-THHHHHHTTCEEEEECCCCTTTSC---
T ss_pred eeeeccC---C-CCcEEEEEecCCC--CCCCCEEEEECCCcCcCCChhHHHH-HHHHHHhCCCEEEEecCCCCCCCC---
Confidence 3445554 4 4567788888752 46789999999986443332 2333 334455599999999999987643
Q ss_pred HhcccccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHHhCC-------CceeEEEecCCccccccc
Q 003878 587 HKGGALAKKQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQRP-------DLFGCALAHVGVMDMLRY 658 (789)
Q Consensus 587 ~~~~~~~~~~~~~~D~~~~~~~L~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~p-------d~f~a~v~~~p~~d~~~~ 658 (789)
.....+|+.+++++|.+. ...++++|+++|+|+||.+++.++.+.+ ++++++|+.+|+.|+...
T Consensus 128 --------~~~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~~~~ 199 (303)
T 4e15_A 128 --------LEQLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDLREL 199 (303)
T ss_dssp --------HHHHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCCHHH
T ss_pred --------hhHHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeeccHhh
Confidence 123468999999999873 2245889999999999999999887654 379999999999987554
Q ss_pred ccccCCccchhhcCCCCcHHHHHHHHhcCcc-cCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhc
Q 003878 659 HKFTIGHAWVSDFGCSEEEEEFYWLIKYSPL-HNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 737 (789)
Q Consensus 659 ~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~-~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~ 737 (789)
..... ......++... +. +...||. ..+.... ....+|+||+||++|..|++.++.+++++|++.
T Consensus 200 ~~~~~-~~~~~~~~~~~--~~---~~~~sp~~~~~~~~~------~~~~~P~lii~G~~D~~v~~~~~~~~~~~l~~~-- 265 (303)
T 4e15_A 200 SNLES-VNPKNILGLNE--RN---IESVSPMLWEYTDVT------VWNSTKIYVVAAEHDSTTFIEQSRHYADVLRKK-- 265 (303)
T ss_dssp HTCTT-TSGGGTTCCCT--TT---TTTTCGGGCCCCCGG------GGTTSEEEEEEEEESCHHHHHHHHHHHHHHHHH--
T ss_pred hcccc-cchhhhhcCCH--HH---HHHcCchhhcccccc------cCCCCCEEEEEeCCCCCCchHHHHHHHHHHHHC--
Confidence 32110 01112223221 11 2566787 4554310 012689999999999999999999999999998
Q ss_pred cCCCCCCCCCcEEEEEeCCCCcC
Q 003878 738 TSLENSPQTNPIIGRIERKAGHG 760 (789)
Q Consensus 738 ~~~~~~~~~~~~~l~~~~~~gH~ 760 (789)
|.++++++++++||.
T Consensus 266 --------g~~~~~~~~~g~~H~ 280 (303)
T 4e15_A 266 --------GYKASFTLFKGYDHF 280 (303)
T ss_dssp --------TCCEEEEEEEEEETT
T ss_pred --------CCceEEEEeCCCCch
Confidence 899999999999995
No 54
>1jjf_A Xylanase Z, endo-1,4-beta-xylanase Z, 1,4-beta-D-xylan; feruloyl esterase, ferulic acid esterase, FAE_XYNZ, XYNZ, structural genomics; 1.75A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1jt2_A*
Probab=99.80 E-value=6e-18 Score=176.60 Aligned_cols=217 Identities=12% Similarity=-0.031 Sum_probs=151.9
Q ss_pred cEEEEEEecC-CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCC----HHHHHHHHcC----CeEEEEEeec
Q 003878 507 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFS----VSRTILMRHL----GAVFCIANIR 577 (789)
Q Consensus 507 ~~~~~~~~s~-dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~----~~~~~~l~~~----G~~v~~~~~R 577 (789)
..+.+.+.+. +| ..+++.++.|++....++.|+||++||+.+........ ......+.++ |++|+.+|+|
T Consensus 31 ~~~~~~~~s~~~~-~~~~~~v~~P~~~~~~~~~P~vv~lHG~g~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~vv~~d~~ 109 (268)
T 1jjf_A 31 QVVNISYFSTATN-STRPARVYLPPGYSKDKKYSVLYLLHGIGGSENDWFEGGGRANVIADNLIAEGKIKPLIIVTPNTN 109 (268)
T ss_dssp EEEEEEEEETTTT-EEEEEEEEECTTCCTTSCBCEEEEECCTTCCTTTTTTTTTCHHHHHHHHHHTTSSCCCEEEEECCC
T ss_pred eEEEEEEeccccC-CceEEEEEeCCCCCCCCCccEEEEECCCCCCcchhhhccccHHHHHHHHHHcCCCCCEEEEEeCCC
Confidence 4567777764 68 89999999999865567899999999987654332211 1123333335 5999999999
Q ss_pred CCCCC-ChhHHhcccccCCcchHHH-HHHHHHHHHHcCCC--CCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 578 GGGEY-GEEWHKGGALAKKQNCFDD-FISASEYLISAGYT--QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 578 G~g~~-g~~~~~~~~~~~~~~~~~D-~~~~~~~L~~~~~~--d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
+.+.. ...| ....+| +.++++++.++.-+ |++||+|+|+|+||++++.++.++|++|+++|+.+|..
T Consensus 110 ~~~~~~~~~~---------~~~~~~~~~~~~~~l~~~~~~~~d~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~v~~s~~~ 180 (268)
T 1jjf_A 110 AAGPGIADGY---------ENFTKDLLNSLIPYIESNYSVYTDREHRAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAP 180 (268)
T ss_dssp CCCTTCSCHH---------HHHHHHHHHTHHHHHHHHSCBCCSGGGEEEEEETHHHHHHHHHHHTCTTTCSEEEEESCCT
T ss_pred CCCccccccH---------HHHHHHHHHHHHHHHHhhcCCCCCCCceEEEEECHHHHHHHHHHHhCchhhhheEEeCCCC
Confidence 86531 1111 011233 33456666554333 89999999999999999999999999999999999976
Q ss_pred cccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHH
Q 003878 654 DMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQ 733 (789)
Q Consensus 654 d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~ 733 (789)
++.. +...+..... . ... ..||+|++||++|..|+. +.+++++|+
T Consensus 181 ~~~~---------~~~~~~~~~~--~------------~~~----------~~pp~li~~G~~D~~v~~--~~~~~~~l~ 225 (268)
T 1jjf_A 181 NTYP---------NERLFPDGGK--A------------ARE----------KLKLLFIACGTNDSLIGF--GQRVHEYCV 225 (268)
T ss_dssp TSCC---------HHHHCTTTTH--H------------HHH----------HCSEEEEEEETTCTTHHH--HHHHHHHHH
T ss_pred CCCc---------hhhhcCcchh--h------------hhh----------cCceEEEEecCCCCCccH--HHHHHHHHH
Confidence 6421 1112221110 0 001 246899999999999874 678999999
Q ss_pred HhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHH
Q 003878 734 YVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 782 (789)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 782 (789)
+. |.+++++++++++|++.. ..+.+.+++.||.++
T Consensus 226 ~~----------g~~~~~~~~~g~~H~~~~----~~~~~~~~~~~l~~~ 260 (268)
T 1jjf_A 226 AN----------NINHVYWLIQGGGHDFNV----WKPGLWNFLQMADEA 260 (268)
T ss_dssp HT----------TCCCEEEEETTCCSSHHH----HHHHHHHHHHHHHHH
T ss_pred HC----------CCceEEEEcCCCCcCHhH----HHHHHHHHHHHHHhc
Confidence 87 889999999999998732 235567788999876
No 55
>1jji_A Carboxylesterase; alpha-beta hydrolase fold, hydrolase; HET: EPE; 2.20A {Archaeoglobus fulgidus} SCOP: c.69.1.2
Probab=99.79 E-value=8.4e-19 Score=187.59 Aligned_cols=229 Identities=16% Similarity=0.139 Sum_probs=158.0
Q ss_pred cEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC-CCCCHHHHHHHHcCCeEEEEEeecCCCCCChh
Q 003878 507 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 585 (789)
Q Consensus 507 ~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~ 585 (789)
..+.+.+++.+| .|++.++ +. .++.|+||++|||...... ..+......+..+.|+.|+.+|+||.|+..
T Consensus 55 ~~~~~~i~~~~g--~i~~~~y-~~----~~~~p~vv~~HGgg~~~g~~~~~~~~~~~la~~~g~~Vv~~dyrg~g~~~-- 125 (311)
T 1jji_A 55 RVEDRTIKGRNG--DIRVRVY-QQ----KPDSPVLVYYHGGGFVICSIESHDALCRRIARLSNSTVVSVDYRLAPEHK-- 125 (311)
T ss_dssp EEEEEEEEETTE--EEEEEEE-ES----SSSEEEEEEECCSTTTSCCTGGGHHHHHHHHHHHTSEEEEEECCCTTTSC--
T ss_pred eEEEEEecCCCC--cEEEEEE-cC----CCCceEEEEECCcccccCChhHhHHHHHHHHHHhCCEEEEecCCCCCCCC--
Confidence 578888988777 7888888 43 3578999999998633222 233333333443579999999999988642
Q ss_pred HHhcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCCCc----eeEEEecCCccccccc
Q 003878 586 WHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDMLRY 658 (789)
Q Consensus 586 ~~~~~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~pd~----f~a~v~~~p~~d~~~~ 658 (789)
.....+|+.++++|+.+.. .+|+++|+|+|+|+||.+++.++.++|+. ++++|+.+|++++...
T Consensus 126 ---------~p~~~~d~~~~~~~l~~~~~~~~~d~~~i~l~G~S~GG~la~~~a~~~~~~~~~~~~~~vl~~p~~~~~~~ 196 (311)
T 1jji_A 126 ---------FPAAVYDCYDATKWVAENAEELRIDPSKIFVGGDSAGGNLAAAVSIMARDSGEDFIKHQILIYPVVNFVAP 196 (311)
T ss_dssp ---------TTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTCCCEEEEEEESCCCCSSSC
T ss_pred ---------CCCcHHHHHHHHHHHHhhHHHhCCCchhEEEEEeCHHHHHHHHHHHHHHhcCCCCceEEEEeCCccCCCCC
Confidence 2335689999999998752 36888999999999999999999887776 9999999999886432
Q ss_pred ccccCCccchhhcCC-C--CcHHHHHHH-------------HhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCc
Q 003878 659 HKFTIGHAWVSDFGC-S--EEEEEFYWL-------------IKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVP 722 (789)
Q Consensus 659 ~~~~~~~~~~~e~g~-p--~~~~~~~~l-------------~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~ 722 (789)
.. .+ .++.. + .......++ ...+|+. ... ...||+||++|++|..++
T Consensus 197 ~~-----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~l--------~~~~P~li~~G~~D~l~~- 259 (311)
T 1jji_A 197 TP-----SL-LEFGEGLWILDQKIMSWFSEQYFSREEDKFNPLASVIF--ADL--------ENLPPALIITAEYDPLRD- 259 (311)
T ss_dssp CH-----HH-HHTSSSCSSCCHHHHHHHHHHHCSSGGGGGCTTTSGGG--SCC--------TTCCCEEEEEEEECTTHH-
T ss_pred Cc-----cH-HHhcCCCccCCHHHHHHHHHHhCCCCccCCCcccCccc--ccc--------cCCChheEEEcCcCcchH-
Confidence 11 00 00000 0 001111000 1124443 111 125899999999999873
Q ss_pred HHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc---hhhHHHHHHHHHHHHHH
Q 003878 723 LHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP---TQKMIDEAADRYGFMAK 781 (789)
Q Consensus 723 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~---~~~~~~~~~~~~~fl~~ 781 (789)
++.+++++|++. +.+++++++++++|++... .....+..+.+.+||.+
T Consensus 260 -~~~~~~~~l~~~----------g~~~~~~~~~g~~H~~~~~~~~~~~~~~~~~~i~~fl~~ 310 (311)
T 1jji_A 260 -EGEVFGQMLRRA----------GVEASIVRYRGVLHGFINYYPVLKAARDAINQIAALLVF 310 (311)
T ss_dssp -HHHHHHHHHHHT----------TCCEEEEEEEEEETTGGGGTTTCHHHHHHHHHHHHHHHC
T ss_pred -HHHHHHHHHHHc----------CCCEEEEEECCCCeeccccCCcCHHHHHHHHHHHHHHhh
Confidence 778899999988 8899999999999987532 12334566778888753
No 56
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=99.78 E-value=4.7e-18 Score=176.41 Aligned_cols=237 Identities=12% Similarity=0.024 Sum_probs=160.5
Q ss_pred cEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhH
Q 003878 507 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 586 (789)
Q Consensus 507 ~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~ 586 (789)
..+.+.++ .+| .+|.++++.|++ .+.|+||++||..+......|. .....|.++||.|+++|+||.|......
T Consensus 21 ~~~~~~~~-~~g-~~l~~~~~~p~~----~~~p~vv~~HG~~~~~~~~~~~-~~~~~l~~~G~~v~~~d~~G~G~s~~~~ 93 (270)
T 3pfb_A 21 GMATITLE-RDG-LQLVGTREEPFG----EIYDMAIIFHGFTANRNTSLLR-EIANSLRDENIASVRFDFNGHGDSDGKF 93 (270)
T ss_dssp EEEEEEEE-ETT-EEEEEEEEECSS----SSEEEEEEECCTTCCTTCHHHH-HHHHHHHHTTCEEEEECCTTSTTSSSCG
T ss_pred cceEEEec-cCC-EEEEEEEEcCCC----CCCCEEEEEcCCCCCccccHHH-HHHHHHHhCCcEEEEEccccccCCCCCC
Confidence 34555555 589 999999998874 4589999999987653222233 3445555699999999999987654321
Q ss_pred HhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccc-----
Q 003878 587 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKF----- 661 (789)
Q Consensus 587 ~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~----- 661 (789)
.. ..-....+|+.++++++.++. +.++++++|+|+||.+++.++.++|++++++|+..|..+.......
T Consensus 94 ~~----~~~~~~~~d~~~~i~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~ 167 (270)
T 3pfb_A 94 EN----MTVLNEIEDANAILNYVKTDP--HVRNIYLVGHAQGGVVASMLAGLYPDLIKKVVLLAPAATLKGDALEGNTQG 167 (270)
T ss_dssp GG----CCHHHHHHHHHHHHHHHHTCT--TEEEEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCTHHHHHHHHTEETT
T ss_pred Cc----cCHHHHHHhHHHHHHHHHhCc--CCCeEEEEEeCchhHHHHHHHHhCchhhcEEEEeccccccchhhhhhhhhc
Confidence 11 111233578889999998763 3359999999999999999999999999999999998765431100
Q ss_pred -cCCccch----hhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhh
Q 003878 662 -TIGHAWV----SDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVL 736 (789)
Q Consensus 662 -~~~~~~~----~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 736 (789)
.....+. ..............+..+.+...+..+ ..|+|+++|.+|..+|+..+.++.+.+.
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~P~l~i~g~~D~~~~~~~~~~~~~~~~--- 234 (270)
T 3pfb_A 168 VTYNPDHIPDRLPFKDLTLGGFYLRIAQQLPIYEVSAQF----------TKPVCLIHGTDDTVVSPNASKKYDQIYQ--- 234 (270)
T ss_dssp EECCTTSCCSEEEETTEEEEHHHHHHHHHCCHHHHHTTC----------CSCEEEEEETTCSSSCTHHHHHHHHHCS---
T ss_pred cccCcccccccccccccccchhHhhcccccCHHHHHhhC----------CccEEEEEcCCCCCCCHHHHHHHHHhCC---
Confidence 0000000 000001122233445555555556665 6899999999999999999888776643
Q ss_pred ccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHH
Q 003878 737 CTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 782 (789)
Q Consensus 737 ~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 782 (789)
.+++.+++++||.+.... ..+....+.+||.++
T Consensus 235 -----------~~~~~~~~~~gH~~~~~~--~~~~~~~i~~fl~~~ 267 (270)
T 3pfb_A 235 -----------NSTLHLIEGADHCFSDSY--QKNAVNLTTDFLQNN 267 (270)
T ss_dssp -----------SEEEEEETTCCTTCCTHH--HHHHHHHHHHHHC--
T ss_pred -----------CCeEEEcCCCCcccCccc--hHHHHHHHHHHHhhc
Confidence 358999999999986332 245667788888654
No 57
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.78 E-value=2.9e-16 Score=169.51 Aligned_cols=308 Identities=10% Similarity=0.083 Sum_probs=195.1
Q ss_pred HhhhcCCCCCCceEeCCEEEEEEEcCC----CCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEE
Q 003878 75 TKLFDSPRYDAPFKRGNKYFYFHNTGL----QPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYAL 150 (789)
Q Consensus 75 ~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~ 150 (789)
+.++..+.++.|..+|.+++|...... .....||+.+..+++.+.| . .+..++|||||++|||+.
T Consensus 9 ~~l~~~~~~~~~~~dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l--~---------~~~~~~~SpDg~~la~~~ 77 (347)
T 2gop_A 9 KTFAKFAYLSDPRTKGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI--E---------NATMPRISPDGKKIAFMR 77 (347)
T ss_dssp -CCCCSCEEEEEEEETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE--E---------SCEEEEECTTSSEEEEEE
T ss_pred ccceeeEEcccceECCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc--c---------cCCCeEECCCCCEEEEEE
Confidence 444444555555559999999876432 2356789887665655544 1 146789999999999998
Q ss_pred ecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeee
Q 003878 151 SYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWS 230 (789)
Q Consensus 151 ~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~ 230 (789)
...++...+|+++|+++|+.... ....
T Consensus 78 ~~~~~~~~~l~~~~~~~g~~~~l--~~~~--------------------------------------------------- 104 (347)
T 2gop_A 78 ANEEKKVSEIWVADLETLSSKKI--LEAK--------------------------------------------------- 104 (347)
T ss_dssp EETTTTEEEEEEEETTTTEEEEE--EEES---------------------------------------------------
T ss_pred eccCCCcceEEEEECCCCceEEE--EcCC---------------------------------------------------
Confidence 76655678999999999865431 1110
Q ss_pred eecccccceEEEEeCCcEEEEEEccCCCCC-CC-CC------CCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeE
Q 003878 231 VVSQFKFSSIAWTHDSKGFFYSRYPAPKEG-KD-MD------AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYI 302 (789)
Q Consensus 231 ~~~~~~~~~~~wspDg~~i~y~~~~~~~~~-~~-~~------~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~ 302 (789)
....++|||||+.|+|...+.++.. .. .. .+..-......+|+++++.++... ..+.. + .+
T Consensus 105 -----~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~-~~l~~-~----~~ 173 (347)
T 2gop_A 105 -----NIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVI-EEFEK-P----RF 173 (347)
T ss_dssp -----EEEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEE-EEEEE-E----TT
T ss_pred -----CccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEE-eeecC-C----Cc
Confidence 0267899999999999875421100 00 00 000000012457999999765431 12222 2 13
Q ss_pred EEEEEecCCcEEEEEEEcCCC----C-ceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEE
Q 003878 303 FSGHVTEDGQYLVMCIEENCD----P-VNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLT 377 (789)
Q Consensus 303 ~~~~~SpDG~~l~~~~~~~~~----~-~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~t 377 (789)
..+.||||| +++....... . ..+||+++ ++. ...+..+ ..... ++|||+.|++.+
T Consensus 174 ~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~--------------~~~l~~~-~~~~~-~spdg~~l~~~~ 233 (347)
T 2gop_A 174 SSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK--------------EEKMFEK-VSFYA-VDSDGERILLYG 233 (347)
T ss_dssp CEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE--------------EEEEEEE-ESEEE-EEECSSCEEEEE
T ss_pred ccccCCCCe--EEEEEecccccccccccccEEEeC--CCc--------------eEEeccC-cceee-ECCCCCEEEEEE
Confidence 468999999 5555543321 1 46899999 431 2333333 22223 499999999988
Q ss_pred CCCC----CCceEEEEECCCCCCeEEeccCCCCceeee-EEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCee
Q 003878 378 NKDA----PKYKIIRVDLKEPNDWFEVIPEAERDVLES-ATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGS 452 (789)
Q Consensus 378 n~~~----~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~-v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~ 452 (789)
+... ...+|+.+| +++ .+.+++.. ...+.. +.|+ ++ +++....++..+|+ ++ + |+. ..+....+.
T Consensus 234 ~~~~~~~~~~~~l~~~d--~~~-~~~l~~~~-~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~-~-g~~-~~~~~~~~~ 303 (347)
T 2gop_A 234 KPEKKYMSEHNKLYIYD--GKE-VMGILDEV-DRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IW-D-GEI-KPIAKGRHW 303 (347)
T ss_dssp CCSSSCCCSSCEEEEEC--SSC-EEESSTTC-CSEEEEEEEET-TE-EEEEEEETTEEEEE-EE-S-SSE-EEEECSSSE
T ss_pred ccccCCccccceEEEEC--CCc-eEeccccC-CcccCCccEEc-Cc-EEEEEecCCcEEEE-Ec-C-Cce-EEEecCCCe
Confidence 7532 357899999 444 56666553 345665 7777 56 88888999988888 88 4 765 444434667
Q ss_pred EEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCCceEEEeee
Q 003878 453 VNAISARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFRE 495 (789)
Q Consensus 453 v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~~~~~l~~ 495 (789)
+..+++++ .++++.++..+|.++|.+| ++ .+.++.
T Consensus 304 v~~~~~s~---~~~~~~~~~~~~~~l~~~~---g~--~~~lt~ 338 (347)
T 2gop_A 304 IMGFDVDE---IVVYLKETATRLRELFTWD---GE--EKQLTD 338 (347)
T ss_dssp EEEEEESS---SEEEEEECSSSCCEEEEES---SS--EEECCC
T ss_pred EEeeeeeC---cEEEEEcCCCChHHheEeC---Cc--EEEecc
Confidence 77788877 4788888999999999998 53 455553
No 58
>1sfr_A Antigen 85-A; alpha/beta hydrolase, structural genomics, PSI, protein structure initiative, TB structural genomics consortium, TBSGC; 2.70A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.78 E-value=6.4e-18 Score=180.17 Aligned_cols=249 Identities=14% Similarity=0.079 Sum_probs=164.7
Q ss_pred cEEEEEEecC-CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHH--HHHHHHcCCeEEEEEeecCCCCCC
Q 003878 507 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVS--RTILMRHLGAVFCIANIRGGGEYG 583 (789)
Q Consensus 507 ~~~~~~~~s~-dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~--~~~~l~~~G~~v~~~~~RG~g~~g 583 (789)
.++.+.+.|. .| .+|+++ +.|.. ++.|+|+++||+.+......|... ...++++.|++|+++|.++++.|.
T Consensus 8 ~v~~~~~~S~~~~-~~i~v~-~~p~~----~~~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~p~~~~~~~~~ 81 (304)
T 1sfr_A 8 PVEYLQVPSPSMG-RDIKVQ-FQSGG----ANSPALYLLDGLRAQDDFSGWDINTPAFEWYDQSGLSVVMPVGGQSSFYS 81 (304)
T ss_dssp CCEEEEEEETTTT-EEEEEE-EECCS----TTBCEEEEECCTTCCSSSCHHHHHCCHHHHHTTSSCEEEEECCCTTCTTC
T ss_pred eEEEEEEECccCC-CceEEE-ECCCC----CCCCEEEEeCCCCCCCCcchhhcCCCHHHHHhcCCeEEEEECCCCCcccc
Confidence 3456667665 57 788877 44443 578999999998432222222221 235676689999999998765442
Q ss_pred hhHHhcccc--cCCcchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccc
Q 003878 584 EEWHKGGAL--AKKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH 659 (789)
Q Consensus 584 ~~~~~~~~~--~~~~~~~~D~~--~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~ 659 (789)
.|...... ......+.+++ +++.++.++--+++++++|+|+|+||++++.++.++|++|+++|+.+|.+++....
T Consensus 82 -~~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~ 160 (304)
T 1sfr_A 82 -DWYQPACGKAGCQTYKWETFLTSELPGWLQANRHVKPTGSAVVGLSMAASSALTLAIYHPQQFVYAGAMSGLLDPSQAM 160 (304)
T ss_dssp -BCSSCEEETTEEECCBHHHHHHTHHHHHHHHHHCBCSSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCTTSTT
T ss_pred -ccCCccccccccccccHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCccccc
Confidence 12111000 00123455543 34444444323678899999999999999999999999999999999988754311
Q ss_pred -c--------ccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCC------------
Q 003878 660 -K--------FTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDD------------ 718 (789)
Q Consensus 660 -~--------~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~------------ 718 (789)
. ......+...||.+... .+.+.+|..++.+.. ...+|+++.+|+.|+
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~l~-------~~~~pi~l~~G~~D~~~~~~~~~~~~~ 229 (304)
T 1sfr_A 161 GPTLIGLAMGDAGGYKASDMWGPKEDP----AWQRNDPLLNVGKLI-------ANNTRVWVYCGNGKPSDLGGNNLPAKF 229 (304)
T ss_dssp HHHHHHHHHHHTTSCCHHHHHCSTTST----HHHHSCTTTTHHHHH-------HHTCEEEEECCCSCCBTTBCCSHHHHH
T ss_pred hhhhhhHhhhhccccchHHhcCCcchh----hhHhcCHHHHHHHhh-------hcCCeEEEEecCCCCccccccccccch
Confidence 0 00000112345655332 245677876554310 014799999999998
Q ss_pred --CCCcHHHHHHHHHHHHhhccCCCCCCCC-CcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCCC
Q 003878 719 --RVVPLHSLKLLATMQYVLCTSLENSPQT-NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGASW 787 (789)
Q Consensus 719 --~V~~~~~~~~~~~L~~~~~~~~~~~~~~-~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 787 (789)
+|+..++.+++++|++. | .++++.++++++|.+. ...+.+.+.+.||.+.|+...
T Consensus 230 ~e~~~~~~~~~~~~~L~~~----------G~~~v~~~~~~~g~H~~~----~w~~~l~~~l~~l~~~l~~~~ 287 (304)
T 1sfr_A 230 LEGFVRTSNIKFQDAYNAG----------GGHNGVFDFPDSGTHSWE----YWGAQLNAMKPDLQRALGATP 287 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHT----------TCCSEEEECCSCCCSSHH----HHHHHHHHTHHHHHHHHTCCC
T ss_pred hHHHHHHHHHHHHHHHHhC----------CCCceEEEecCCCccCHH----HHHHHHHHHHHHHHHhcCCCc
Confidence 67889999999999998 8 9999999988899752 124566788999999998653
No 59
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=99.78 E-value=1.5e-17 Score=172.10 Aligned_cols=231 Identities=13% Similarity=0.065 Sum_probs=157.2
Q ss_pred EEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccC-CCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHH
Q 003878 509 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWH 587 (789)
Q Consensus 509 ~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~ 587 (789)
.+..+.+.|| .+|++.++.|++ .++.|+||++||+..... ...+......++.+. |.|+.+|+||+++...
T Consensus 4 ~~~~~~~~dg-~~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~l~~~-~~v~~~d~~~~~~~~~--- 75 (275)
T 3h04_A 4 IKYKVITKDA-FALPYTIIKAKN---QPTKGVIVYIHGGGLMFGKANDLSPQYIDILTEH-YDLIQLSYRLLPEVSL--- 75 (275)
T ss_dssp EEEEEECTTS-CEEEEEEECCSS---SSCSEEEEEECCSTTTSCCTTCSCHHHHHHHTTT-EEEEEECCCCTTTSCH---
T ss_pred eEEEEecCCc-EEEEEEEEccCC---CCCCCEEEEEECCcccCCchhhhHHHHHHHHHhC-ceEEeeccccCCcccc---
Confidence 4566788899 999999999875 357899999999863322 334444566777744 9999999998875321
Q ss_pred hcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccccc-----
Q 003878 588 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFT----- 662 (789)
Q Consensus 588 ~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~----- 662 (789)
....+|+.++++++.+. .+.++++++|+|+||.+++.++.+ ++++++|+.+|+.++.......
T Consensus 76 --------~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a~~--~~v~~~v~~~~~~~~~~~~~~~~~~~~ 143 (275)
T 3h04_A 76 --------DCIIEDVYASFDAIQSQ--YSNCPIFTFGRSSGAYLSLLIARD--RDIDGVIDFYGYSRINTEPFKTTNSYY 143 (275)
T ss_dssp --------HHHHHHHHHHHHHHHHT--TTTSCEEEEEETHHHHHHHHHHHH--SCCSEEEEESCCSCSCSHHHHSCCHHH
T ss_pred --------chhHHHHHHHHHHHHhh--CCCCCEEEEEecHHHHHHHHHhcc--CCccEEEeccccccccccccccccchh
Confidence 23578999999999987 567899999999999999999998 7899999999988763221000
Q ss_pred ------CCccchhhc------C-CC--CcHHHHHHHHh-------cCcc-----------cCCCCCCCCCCCCCCCCCeE
Q 003878 663 ------IGHAWVSDF------G-CS--EEEEEFYWLIK-------YSPL-----------HNVRRPWEQNPDKPFQYPST 709 (789)
Q Consensus 663 ------~~~~~~~e~------g-~p--~~~~~~~~l~~-------~sP~-----------~~v~~~~~~~~~~~~~~pp~ 709 (789)
........+ . .+ .....+..... +... ..+.. .+|+
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~P~ 212 (275)
T 3h04_A 144 AKIAQSINETMIAQLTSPTPVVQDQIAQRFLIYVYARGTGKWINMINIADYTDSKYNIAPDELKT-----------LPPV 212 (275)
T ss_dssp HHHHTTSCHHHHHTTSCSSCCSSCSSGGGHHHHHHHHHHTCHHHHHCCSCTTSGGGSCCHHHHTT-----------CCCE
T ss_pred hcccccchHHHHhcccCCCCcCCCccccchhhhhhhhhcCchHHhhccccccccccccccchhcc-----------CCCE
Confidence 000000000 0 00 00011100111 1100 00122 2399
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchh-hHHHHHHHHHHHHHHHhC
Q 003878 710 LLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQ-KMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 710 Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~-~~~~~~~~~~~fl~~~l~ 784 (789)
|+++|++|..||+.++.++++++.. ..+.+++++||.+..... ...+....+.+||.+++.
T Consensus 213 lii~G~~D~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 274 (275)
T 3h04_A 213 FIAHCNGDYDVPVEESEHIMNHVPH--------------STFERVNKNEHDFDRRPNDEAITIYRKVVDFLNAITM 274 (275)
T ss_dssp EEEEETTCSSSCTHHHHHHHTTCSS--------------EEEEEECSSCSCTTSSCCHHHHHHHHHHHHHHHHHHC
T ss_pred EEEecCCCCCCChHHHHHHHHhcCC--------------ceEEEeCCCCCCcccCCchhHHHHHHHHHHHHHHHhc
Confidence 9999999999999998888765442 468999999999765433 124677889999998874
No 60
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=99.78 E-value=9e-18 Score=167.67 Aligned_cols=200 Identities=11% Similarity=0.041 Sum_probs=145.1
Q ss_pred EEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCc--cCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChh
Q 003878 508 VHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNI--SVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 585 (789)
Q Consensus 508 ~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~--~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~ 585 (789)
.+.+.+++.|| +|+++++.|++ .++.|+||++||+... .....+...+...+.++||.|+.+|+||.|.....
T Consensus 6 ~~~~~~~~~~g--~l~~~~~~p~~---~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~~ 80 (208)
T 3trd_A 6 NEDFLIQGPVG--QLEVMITRPKG---IEKSVTGIICHPHPLHGGTMNNKVVTTLAKALDELGLKTVRFNFRGVGKSQGR 80 (208)
T ss_dssp SSCEEEECSSS--EEEEEEECCSS---CCCSEEEEEECSCGGGTCCTTCHHHHHHHHHHHHTTCEEEEECCTTSTTCCSC
T ss_pred cceEEEECCCc--eEEEEEEcCCC---CCCCCEEEEEcCCCCCCCccCCchHHHHHHHHHHCCCEEEEEecCCCCCCCCC
Confidence 45678888888 89999998875 3478999999996322 11111112345556669999999999998765432
Q ss_pred HHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCc
Q 003878 586 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGH 665 (789)
Q Consensus 586 ~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~ 665 (789)
+ .......+|+.+++++|.++ .+.++++++|+|+||.+++.++ ++| .++++|+..|..+.
T Consensus 81 ~------~~~~~~~~d~~~~~~~l~~~--~~~~~i~l~G~S~Gg~~a~~~a-~~~-~v~~~v~~~~~~~~---------- 140 (208)
T 3trd_A 81 Y------DNGVGEVEDLKAVLRWVEHH--WSQDDIWLAGFSFGAYISAKVA-YDQ-KVAQLISVAPPVFY---------- 140 (208)
T ss_dssp C------CTTTHHHHHHHHHHHHHHHH--CTTCEEEEEEETHHHHHHHHHH-HHS-CCSEEEEESCCTTS----------
T ss_pred c------cchHHHHHHHHHHHHHHHHh--CCCCeEEEEEeCHHHHHHHHHh-ccC-CccEEEEecccccc----------
Confidence 1 22345579999999999987 3458999999999999999999 668 89999988886621
Q ss_pred cchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCC
Q 003878 666 AWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQ 745 (789)
Q Consensus 666 ~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~ 745 (789)
| ++..+... ..|+|+++|++|..||+.++.++++++..
T Consensus 141 -~--------------------~~~~~~~~----------~~p~l~i~g~~D~~~~~~~~~~~~~~~~~----------- 178 (208)
T 3trd_A 141 -E--------------------GFASLTQM----------ASPWLIVQGDQDEVVPFEQVKAFVNQISS----------- 178 (208)
T ss_dssp -G--------------------GGTTCCSC----------CSCEEEEEETTCSSSCHHHHHHHHHHSSS-----------
T ss_pred -C--------------------Cchhhhhc----------CCCEEEEECCCCCCCCHHHHHHHHHHccC-----------
Confidence 1 00112222 57999999999999999998888776542
Q ss_pred CCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHH
Q 003878 746 TNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 779 (789)
Q Consensus 746 ~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl 779 (789)
.+++.+++++||.+.... .+....+.+||
T Consensus 179 --~~~~~~~~~~~H~~~~~~---~~~~~~i~~fl 207 (208)
T 3trd_A 179 --PVEFVVMSGASHFFHGRL---IELRELLVRNL 207 (208)
T ss_dssp --CCEEEEETTCCSSCTTCH---HHHHHHHHHHH
T ss_pred --ceEEEEeCCCCCcccccH---HHHHHHHHHHh
Confidence 268999999999987543 23444555665
No 61
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=99.77 E-value=5.4e-18 Score=188.39 Aligned_cols=240 Identities=11% Similarity=0.120 Sum_probs=164.8
Q ss_pred cEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHH-HHHHHcCCeEEEEEeecCCCCCChh
Q 003878 507 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSR-TILMRHLGAVFCIANIRGGGEYGEE 585 (789)
Q Consensus 507 ~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~g~~ 585 (789)
..+.+.++. +| .+|+++++.+ + .++.|+||++||..+..... .... ..++. +||.|+++|+||.|+....
T Consensus 134 ~~~~~~i~~-~~-~~l~~~~~~~-~---~~~~p~vv~~HG~~~~~~~~--~~~~~~~~~~-~g~~vi~~D~~G~G~s~~~ 204 (405)
T 3fnb_A 134 PLKSIEVPF-EG-ELLPGYAIIS-E---DKAQDTLIVVGGGDTSREDL--FYMLGYSGWE-HDYNVLMVDLPGQGKNPNQ 204 (405)
T ss_dssp CCEEEEEEE-TT-EEEEEEEECC-S---SSCCCEEEEECCSSCCHHHH--HHHTHHHHHH-TTCEEEEECCTTSTTGGGG
T ss_pred CcEEEEEeE-CC-eEEEEEEEcC-C---CCCCCEEEEECCCCCCHHHH--HHHHHHHHHh-CCcEEEEEcCCCCcCCCCC
Confidence 456777776 68 8999988743 2 24569999999975443221 1111 24455 9999999999998864211
Q ss_pred HHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCC-
Q 003878 586 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG- 664 (789)
Q Consensus 586 ~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~- 664 (789)
.........+|+.+++++|...+ ++|+++|+|+||++++.++.++| +++++|+..|+.++.........
T Consensus 205 -----~~~~~~~~~~d~~~~~~~l~~~~----~~v~l~G~S~GG~~a~~~a~~~p-~v~~~v~~~p~~~~~~~~~~~~~~ 274 (405)
T 3fnb_A 205 -----GLHFEVDARAAISAILDWYQAPT----EKIAIAGFSGGGYFTAQAVEKDK-RIKAWIASTPIYDVAEVFRISFST 274 (405)
T ss_dssp -----TCCCCSCTHHHHHHHHHHCCCSS----SCEEEEEETTHHHHHHHHHTTCT-TCCEEEEESCCSCHHHHHHHHCC-
T ss_pred -----CCCCCccHHHHHHHHHHHHHhcC----CCEEEEEEChhHHHHHHHHhcCc-CeEEEEEecCcCCHHHHHHHhhhh
Confidence 11222345788999999988764 68999999999999999999999 89999999999987543210000
Q ss_pred ----ccc-----------------------hhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCC
Q 003878 665 ----HAW-----------------------VSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHD 717 (789)
Q Consensus 665 ----~~~-----------------------~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D 717 (789)
+.+ ...++........+.+..+++...+.++ .+|+|+++|.+|
T Consensus 275 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~PvLii~G~~D 344 (405)
T 3fnb_A 275 ALKAPKTILKWGSKLVTSVNKVAEVNLNKYAWQFGQVDFITSVNEVLEQAQIVDYNKI----------DVPSLFLVGAGE 344 (405)
T ss_dssp -----------------CCCHHHHHHHHHHHHHHTSSSHHHHHHHHHHHCCCCCGGGC----------CSCEEEEEETTS
T ss_pred hhhCcHHHHHHHHHHhhccchhHHHHHHHhhhhcCCCCHHHHHHHHHHhhcccCHhhC----------CCCEEEEecCCC
Confidence 000 0012222222223344455554445554 689999999999
Q ss_pred CCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCC-chhhHHHHHHHHHHHHHHHhCC
Q 003878 718 DRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL-PTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 718 ~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~-~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
..||+.++.+++++|+.. +.++++.++++..|+... ...........+.+||.++++.
T Consensus 345 ~~v~~~~~~~l~~~l~~~----------~~~~~l~~~~~~~h~gh~~~~~~~~~~~~~i~~fL~~~l~~ 403 (405)
T 3fnb_A 345 DSELMRQSQVLYDNFKQR----------GIDVTLRKFSSESGADAHCQVNNFRLMHYQVFEWLNHIFKK 403 (405)
T ss_dssp CHHHHHHHHHHHHHHHHT----------TCCEEEEEECTTTTCCSGGGGGGHHHHHHHHHHHHHHHHC-
T ss_pred cCCChHHHHHHHHHhccC----------CCCceEEEEcCCccchhccccchHHHHHHHHHHHHHHHhCc
Confidence 999999999999999987 788999999666554321 1222346678899999999875
No 62
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=99.77 E-value=1.5e-17 Score=172.72 Aligned_cols=207 Identities=16% Similarity=0.082 Sum_probs=156.0
Q ss_pred CCCcEEEEEEecC--CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCC
Q 003878 504 SEFHVHQVFVPSK--DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGE 581 (789)
Q Consensus 504 ~~~~~~~~~~~s~--dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~ 581 (789)
..+..+.+.+++. +| .. .+.+++|... ..++.|+||++||..+... .|.. ....|.++||.|+++|+||.|.
T Consensus 21 g~~~~~~~~~~~~~~~~-~~-~~~l~~p~~~-~~~~~p~vv~~HG~~~~~~--~~~~-~~~~l~~~G~~v~~~d~~g~g~ 94 (262)
T 1jfr_A 21 GPYATSQTSVSSLVASG-FG-GGTIYYPTST-ADGTFGAVVISPGFTAYQS--SIAW-LGPRLASQGFVVFTIDTNTTLD 94 (262)
T ss_dssp CSSCEEEEEECTTTCSS-SC-CEEEEEESCC-TTCCEEEEEEECCTTCCGG--GTTT-HHHHHHTTTCEEEEECCSSTTC
T ss_pred CCCCccceEecceeccC-CC-ceeEEecCCC-CCCCCCEEEEeCCcCCCch--hHHH-HHHHHHhCCCEEEEeCCCCCCC
Confidence 3466677777765 44 22 4677888763 2467899999999876544 2333 3455666899999999999775
Q ss_pred CChhHHhcccccCCcchHHHHHHHHHHHHH----cCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccc
Q 003878 582 YGEEWHKGGALAKKQNCFDDFISASEYLIS----AGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR 657 (789)
Q Consensus 582 ~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~----~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~ 657 (789)
... ....|+.+++++|.+ ....+.++++++|+|+||.+++.++.++|+ ++++|+..|+..
T Consensus 95 ~~~------------~~~~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~p~~~--- 158 (262)
T 1jfr_A 95 QPD------------SRGRQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS-LKAAIPLTGWNT--- 158 (262)
T ss_dssp CHH------------HHHHHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS---
T ss_pred CCc------------hhHHHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc-ceEEEeecccCc---
Confidence 432 224688899999988 344678899999999999999999999998 899988776431
Q ss_pred cccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHH-HHHHHHHHHHhh
Q 003878 658 YHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKLLATMQYVL 736 (789)
Q Consensus 658 ~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~-~~~~~~~L~~~~ 736 (789)
...+.+. .+|+|+++|++|..+++.+ +.++++.++.
T Consensus 159 -------------------------------~~~~~~~----------~~P~l~i~G~~D~~~~~~~~~~~~~~~l~~-- 195 (262)
T 1jfr_A 159 -------------------------------DKTWPEL----------RTPTLVVGADGDTVAPVATHSKPFYESLPG-- 195 (262)
T ss_dssp -------------------------------CCCCTTC----------CSCEEEEEETTCSSSCTTTTHHHHHHHSCT--
T ss_pred -------------------------------ccccccc----------CCCEEEEecCccccCCchhhHHHHHHHhhc--
Confidence 1222333 5799999999999999998 9999988843
Q ss_pred ccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCC
Q 003878 737 CTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 737 ~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
+.++++.+++++||.+..... .+....+.+||.++++..
T Consensus 196 ---------~~~~~~~~~~~~~H~~~~~~~--~~~~~~i~~fl~~~l~~~ 234 (262)
T 1jfr_A 196 ---------SLDKAYLELRGASHFTPNTSD--TTIAKYSISWLKRFIDSD 234 (262)
T ss_dssp ---------TSCEEEEEETTCCTTGGGSCC--HHHHHHHHHHHHHHHSCC
T ss_pred ---------CCCceEEEeCCCCcCCcccch--HHHHHHHHHHHHHHhcCc
Confidence 567899999999998765433 356788999999998754
No 63
>4h0c_A Phospholipase/carboxylesterase; PSI-biology, midwest center for structural genomics, MCSG, hydrolase; HET: CIT; 1.62A {Dyadobacter fermentans}
Probab=99.77 E-value=1.1e-18 Score=175.41 Aligned_cols=186 Identities=9% Similarity=0.039 Sum_probs=128.8
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHH----HHH
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEY----LIS 611 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~----L~~ 611 (789)
...|+||++||..+... .|.. +...|...|+.|++|+.+|.+.|+..+..... .....+++..+.++. +.+
T Consensus 20 ~a~~~Vv~lHG~G~~~~--~~~~-l~~~l~~~~~~v~~P~~~g~~w~~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~ 94 (210)
T 4h0c_A 20 RAKKAVVMLHGRGGTAA--DIIS-LQKVLKLDEMAIYAPQATNNSWYPYSFMAPVQ--QNQPALDSALALVGEVVAEIEA 94 (210)
T ss_dssp TCSEEEEEECCTTCCHH--HHHG-GGGTSSCTTEEEEEECCGGGCSSSSCTTSCGG--GGTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEeCCCCCHH--HHHH-HHHHhCCCCeEEEeecCCCCCccccccCCCcc--cchHHHHHHHHHHHHHHHHHHH
Confidence 45689999999433211 1111 22334457999999999987766544433221 122334444444444 334
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccC
Q 003878 612 AGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHN 691 (789)
Q Consensus 612 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~ 691 (789)
. .+|++||+++|+|+||.+++.++.++|++|+++|+.++.+..... ... ..
T Consensus 95 ~-~i~~~ri~l~G~S~Gg~~a~~~a~~~p~~~~~vv~~sg~l~~~~~-----------------~~~-----------~~ 145 (210)
T 4h0c_A 95 Q-GIPAEQIYFAGFSQGACLTLEYTTRNARKYGGIIAFTGGLIGQEL-----------------AIG-----------NY 145 (210)
T ss_dssp T-TCCGGGEEEEEETHHHHHHHHHHHHTBSCCSEEEEETCCCCSSSC-----------------CGG-----------GC
T ss_pred h-CCChhhEEEEEcCCCcchHHHHHHhCcccCCEEEEecCCCCChhh-----------------hhh-----------hh
Confidence 4 479999999999999999999999999999999988774321000 000 00
Q ss_pred CCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHH
Q 003878 692 VRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDE 771 (789)
Q Consensus 692 v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~ 771 (789)
.... ..+|+|++||++|++||++++++++++|++. |.++++++||+.||+... ++
T Consensus 146 ~~~~---------~~~Pvl~~hG~~D~~vp~~~~~~~~~~L~~~----------g~~v~~~~ypg~gH~i~~------~e 200 (210)
T 4h0c_A 146 KGDF---------KQTPVFISTGNPDPHVPVSRVQESVTILEDM----------NAAVSQVVYPGRPHTISG------DE 200 (210)
T ss_dssp CBCC---------TTCEEEEEEEESCTTSCHHHHHHHHHHHHHT----------TCEEEEEEEETCCSSCCH------HH
T ss_pred hhhc---------cCCceEEEecCCCCccCHHHHHHHHHHHHHC----------CCCeEEEEECCCCCCcCH------HH
Confidence 0011 2579999999999999999999999999998 999999999999998742 34
Q ss_pred HHHHHHHHH
Q 003878 772 AADRYGFMA 780 (789)
Q Consensus 772 ~~~~~~fl~ 780 (789)
++.+.+||.
T Consensus 201 l~~i~~wL~ 209 (210)
T 4h0c_A 201 IQLVNNTIL 209 (210)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHc
Confidence 556677764
No 64
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=99.77 E-value=1.5e-17 Score=167.41 Aligned_cols=208 Identities=13% Similarity=0.041 Sum_probs=153.4
Q ss_pred cEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCcc--CCCCCCHHHHHHHHcCCeEEEEEeecCCCCCCh
Q 003878 507 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNIS--VTPSFSVSRTILMRHLGAVFCIANIRGGGEYGE 584 (789)
Q Consensus 507 ~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~--~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~ 584 (789)
..+.+.+++.|| +++++++.|++.. .++.|+||++||+.... ....+.......|.++||.|+++|+||.|....
T Consensus 9 ~~~~~~~~~~~g--~~~~~~~~p~~~~-~~~~~~vv~~HG~~~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~g~g~s~~ 85 (220)
T 2fuk_A 9 ESAALTLDGPVG--PLDVAVDLPEPDV-AVQPVTAIVCHPLSTEGGSMHNKVVTMAARALRELGITVVRFNFRSVGTSAG 85 (220)
T ss_dssp SCEEEEEEETTE--EEEEEEECCCTTS-CCCSEEEEEECSCTTTTCSTTCHHHHHHHHHHHTTTCEEEEECCTTSTTCCS
T ss_pred cceEEEEeCCCC--eEEEEEEeCCCCC-ccccCEEEEECCCCCcCCcccchHHHHHHHHHHHCCCeEEEEecCCCCCCCC
Confidence 457788888887 7999999987621 14589999999964221 121111234556666899999999999876543
Q ss_pred hHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCC
Q 003878 585 EWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG 664 (789)
Q Consensus 585 ~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~ 664 (789)
.+ .......+|+.+++++|.++. +.++++++|+|+||.+++.++.++ .++++|+..|..+...
T Consensus 86 ~~------~~~~~~~~d~~~~~~~l~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~--~v~~~v~~~~~~~~~~------- 148 (220)
T 2fuk_A 86 SF------DHGDGEQDDLRAVAEWVRAQR--PTDTLWLAGFSFGAYVSLRAAAAL--EPQVLISIAPPAGRWD------- 148 (220)
T ss_dssp CC------CTTTHHHHHHHHHHHHHHHHC--TTSEEEEEEETHHHHHHHHHHHHH--CCSEEEEESCCBTTBC-------
T ss_pred Cc------ccCchhHHHHHHHHHHHHhcC--CCCcEEEEEECHHHHHHHHHHhhc--cccEEEEecccccchh-------
Confidence 22 222445799999999999874 667999999999999999999886 7999999888765322
Q ss_pred ccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCC
Q 003878 665 HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSP 744 (789)
Q Consensus 665 ~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~ 744 (789)
+..+.. ..|+|+++|++|..||+.++.+++++++
T Consensus 149 ------------------------~~~~~~-----------~~p~l~i~g~~D~~~~~~~~~~~~~~~~----------- 182 (220)
T 2fuk_A 149 ------------------------FSDVQP-----------PAQWLVIQGDADEIVDPQAVYDWLETLE----------- 182 (220)
T ss_dssp ------------------------CTTCCC-----------CSSEEEEEETTCSSSCHHHHHHHHTTCS-----------
T ss_pred ------------------------hhhccc-----------CCcEEEEECCCCcccCHHHHHHHHHHhC-----------
Confidence 111111 3579999999999999998888876653
Q ss_pred CCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 745 QTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 745 ~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
..+++.+++++||.+... . .+....+.+||.+++..
T Consensus 183 --~~~~~~~~~~~~H~~~~~-~--~~~~~~i~~~l~~~l~~ 218 (220)
T 2fuk_A 183 --QQPTLVRMPDTSHFFHRK-L--IDLRGALQHGVRRWLPA 218 (220)
T ss_dssp --SCCEEEEETTCCTTCTTC-H--HHHHHHHHHHHGGGCSS
T ss_pred --cCCcEEEeCCCCceehhh-H--HHHHHHHHHHHHHHhhc
Confidence 245889999999998663 2 35667888999888754
No 65
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=99.76 E-value=1.2e-17 Score=178.09 Aligned_cols=203 Identities=16% Similarity=0.074 Sum_probs=152.6
Q ss_pred CcEEEEEEec--CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCC
Q 003878 506 FHVHQVFVPS--KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 583 (789)
Q Consensus 506 ~~~~~~~~~s--~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g 583 (789)
+......+.. .+| .. ...+++|.+. .+.|+||++||..+... .|. .....|.++||.|+.+|+||.|+..
T Consensus 67 ~~~~~~~~~~~~~~g-~~-~~~~~~p~~~---~~~p~vv~~HG~~~~~~--~~~-~~~~~la~~G~~vv~~d~~g~g~s~ 138 (306)
T 3vis_A 67 FSVSEERASRFGADG-FG-GGTIYYPREN---NTYGAIAISPGYTGTQS--SIA-WLGERIASHGFVVIAIDTNTTLDQP 138 (306)
T ss_dssp SCEEEEEECTTTCSS-SC-CEEEEEESSC---SCEEEEEEECCTTCCHH--HHH-HHHHHHHTTTEEEEEECCSSTTCCH
T ss_pred ccceeeeeeccccCC-Cc-ceEEEeeCCC---CCCCEEEEeCCCcCCHH--HHH-HHHHHHHhCCCEEEEecCCCCCCCc
Confidence 3344444432 556 33 3677888763 37899999999765432 222 3455666699999999999977643
Q ss_pred hhHHhcccccCCcchHHHHHHHHHHHHHc------CCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccc
Q 003878 584 EEWHKGGALAKKQNCFDDFISASEYLISA------GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR 657 (789)
Q Consensus 584 ~~~~~~~~~~~~~~~~~D~~~~~~~L~~~------~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~ 657 (789)
.. ..+|+.+++++|.+. ..+|+++|+++|+|+||.+++.++.++|+ ++++|+..|+..
T Consensus 139 ~~------------~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p~-v~~~v~~~~~~~--- 202 (306)
T 3vis_A 139 DS------------RARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD-LKAAIPLTPWHL--- 202 (306)
T ss_dssp HH------------HHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCTT-CSEEEEESCCCS---
T ss_pred ch------------HHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCCC-eeEEEEeccccC---
Confidence 22 237889999999987 67889999999999999999999999998 888888777432
Q ss_pred cccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcH-HHHHHHHHHHHhh
Q 003878 658 YHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPL-HSLKLLATMQYVL 736 (789)
Q Consensus 658 ~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~-~~~~~~~~L~~~~ 736 (789)
...+.++ .+|+|+++|++|..+|+. ++.+++++++..
T Consensus 203 -------------------------------~~~~~~~----------~~P~lii~G~~D~~~~~~~~~~~~~~~l~~~- 240 (306)
T 3vis_A 203 -------------------------------NKSWRDI----------TVPTLIIGAEYDTIASVTLHSKPFYNSIPSP- 240 (306)
T ss_dssp -------------------------------CCCCTTC----------CSCEEEEEETTCSSSCTTTTHHHHHHTCCTT-
T ss_pred -------------------------------ccccccC----------CCCEEEEecCCCcccCcchhHHHHHHHhccC-
Confidence 0122333 579999999999999998 689998888764
Q ss_pred ccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCC
Q 003878 737 CTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 737 ~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
+ ++++.+++++||++..... .+....+.+||.++++..
T Consensus 241 ---------~-~~~~~~~~g~gH~~~~~~~--~~~~~~i~~fl~~~l~~~ 278 (306)
T 3vis_A 241 ---------T-DKAYLELDGASHFAPNITN--KTIGMYSVAWLKRFVDED 278 (306)
T ss_dssp ---------S-CEEEEEETTCCTTGGGSCC--HHHHHHHHHHHHHHHSCC
T ss_pred ---------C-CceEEEECCCCccchhhch--hHHHHHHHHHHHHHccCc
Confidence 4 8899999999999755433 356678999999998754
No 66
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=99.76 E-value=1.3e-17 Score=173.02 Aligned_cols=201 Identities=11% Similarity=0.057 Sum_probs=147.9
Q ss_pred EEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCc-cCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHh
Q 003878 510 QVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNI-SVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK 588 (789)
Q Consensus 510 ~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~-~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~ 588 (789)
...++..+| ..+++.++.|++ ++.|+||++|||... .....|.. +...+.++||.|+++|+||.++..
T Consensus 40 ~~~i~~~~~-~~~~~~~~~p~~----~~~p~vv~~HGgg~~~~~~~~~~~-~~~~l~~~G~~v~~~d~~~~~~~~----- 108 (262)
T 2pbl_A 40 RLNLSYGEG-DRHKFDLFLPEG----TPVGLFVFVHGGYWMAFDKSSWSH-LAVGALSKGWAVAMPSYELCPEVR----- 108 (262)
T ss_dssp EEEEESSSS-TTCEEEEECCSS----SCSEEEEEECCSTTTSCCGGGCGG-GGHHHHHTTEEEEEECCCCTTTSC-----
T ss_pred ccccccCCC-CCceEEEEccCC----CCCCEEEEEcCcccccCChHHHHH-HHHHHHhCCCEEEEeCCCCCCCCC-----
Confidence 334454566 678888888875 567999999997522 22233443 334555589999999999976532
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC------CCceeEEEecCCccccccccccc
Q 003878 589 GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR------PDLFGCALAHVGVMDMLRYHKFT 662 (789)
Q Consensus 589 ~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~------pd~f~a~v~~~p~~d~~~~~~~~ 662 (789)
.....+|+.+++++|..+.. ++++++|+|+||.+++.++.++ |++++++|+.+|+.++.......
T Consensus 109 ------~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~~~~~~~~ 179 (262)
T 2pbl_A 109 ------ISEITQQISQAVTAAAKEID---GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDLRPLLRTS 179 (262)
T ss_dssp ------HHHHHHHHHHHHHHHHHHSC---SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCCGGGGGST
T ss_pred ------hHHHHHHHHHHHHHHHHhcc---CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCchHHHhhh
Confidence 12336899999999988743 7999999999999999999887 89999999999998865433211
Q ss_pred CCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCC
Q 003878 663 IGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLEN 742 (789)
Q Consensus 663 ~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~ 742 (789)
+...++. .+ ..+...+|...+... .+|+|+++|++|..|++.++.++++++. .
T Consensus 180 ----~~~~~~~--~~---~~~~~~~~~~~~~~~----------~~P~lii~G~~D~~~~~~~~~~~~~~~~-~------- 232 (262)
T 2pbl_A 180 ----MNEKFKM--DA---DAAIAESPVEMQNRY----------DAKVTVWVGGAERPAFLDQAIWLVEAWD-A------- 232 (262)
T ss_dssp ----THHHHCC--CH---HHHHHTCGGGCCCCC----------SCEEEEEEETTSCHHHHHHHHHHHHHHT-C-------
T ss_pred ----hhhhhCC--CH---HHHHhcCcccccCCC----------CCCEEEEEeCCCCcccHHHHHHHHHHhC-C-------
Confidence 1111221 12 224667888877665 7899999999999999999999988775 3
Q ss_pred CCCCCcEEEEEeCCCCcCCCCc
Q 003878 743 SPQTNPIIGRIERKAGHGVGLP 764 (789)
Q Consensus 743 ~~~~~~~~l~~~~~~gH~~~~~ 764 (789)
++.+++++||.....
T Consensus 233 -------~~~~~~~~~H~~~~~ 247 (262)
T 2pbl_A 233 -------DHVIAFEKHHFNVIE 247 (262)
T ss_dssp -------EEEEETTCCTTTTTG
T ss_pred -------eEEEeCCCCcchHHh
Confidence 789999999986543
No 67
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=99.76 E-value=3.8e-17 Score=176.13 Aligned_cols=242 Identities=12% Similarity=0.067 Sum_probs=164.2
Q ss_pred CCcEEEE-EEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCC
Q 003878 505 EFHVHQV-FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG 583 (789)
Q Consensus 505 ~~~~~~~-~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g 583 (789)
.+..+++ .+...|| .+|.+.++.|.+ ++.|+||++||..+... .|.. ....|.++||.|+++|+||.|...
T Consensus 31 ~~~~~~~~~~~~~dg-~~l~~~~~~p~~----~~~p~vv~~HG~~~~~~--~~~~-~~~~l~~~g~~vi~~D~~G~G~S~ 102 (342)
T 3hju_A 31 SIPYQDLPHLVNADG-QYLFCRYWKPTG----TPKALIFVSHGAGEHSG--RYEE-LARMLMGLDLLVFAHDHVGHGQSE 102 (342)
T ss_dssp SCBTTSSCEEECTTS-CEEEEEEECCSS----CCSEEEEEECCTTCCGG--GGHH-HHHHHHTTTEEEEEECCTTSTTSC
T ss_pred CcccccCceEEccCC-eEEEEEEeCCCC----CCCcEEEEECCCCcccc--hHHH-HHHHHHhCCCeEEEEcCCCCcCCC
Confidence 3444445 6788899 999999998864 46799999999876543 3443 455666589999999999987654
Q ss_pred hhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccc--
Q 003878 584 EEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKF-- 661 (789)
Q Consensus 584 ~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~-- 661 (789)
.. ...........+|+.+++++|..+ .+.++++++|+|+||.+++.++.++|++++++|+..|+.+.......
T Consensus 103 ~~---~~~~~~~~~~~~d~~~~l~~l~~~--~~~~~v~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~ 177 (342)
T 3hju_A 103 GE---RMVVSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTF 177 (342)
T ss_dssp SS---TTCCSCTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCSCCTTTTSHH
T ss_pred Cc---CCCcCcHHHHHHHHHHHHHHHHHh--CCCCcEEEEEeChHHHHHHHHHHhCccccceEEEECcccccchhhhhHH
Confidence 21 101112223468999999999887 45679999999999999999999999999999999998765322100
Q ss_pred ---------------cCCccchhhcCCCCcHHHHHHHHhcCcc----------------------cCCCCCCCCCCCCCC
Q 003878 662 ---------------TIGHAWVSDFGCSEEEEEFYWLIKYSPL----------------------HNVRRPWEQNPDKPF 704 (789)
Q Consensus 662 ---------------~~~~~~~~e~g~p~~~~~~~~l~~~sP~----------------------~~v~~~~~~~~~~~~ 704 (789)
.... ....+. ..+++....+.. .|. ..+.++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i--------- 245 (342)
T 3hju_A 178 KVLAAKVLNLVLPNLSLGP-IDSSVL-SRNKTEVDIYNS-DPLICRAGLKVCFGIQLLNAVSRVERALPKL--------- 245 (342)
T ss_dssp HHHHHHHHHHHCTTCBCCC-CCGGGS-CSCHHHHHHHHT-CTTCCCSCCBHHHHHHHHHHHHHHHHHGGGC---------
T ss_pred HHHHHHHHHHhccccccCc-cccccc-ccchHHHHHHhc-CcccccccccHHHHHHHHHHHHHHHHHHHhC---------
Confidence 0000 000000 011111111111 111 223333
Q ss_pred CCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCch-hhHHHHHHHHHHHHHHHh
Q 003878 705 QYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT-QKMIDEAADRYGFMAKML 783 (789)
Q Consensus 705 ~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~~~l 783 (789)
.+|+|+++|++|..|++..+.++++.+. +..+++.+++++||.+.... ....+....+++||.+++
T Consensus 246 -~~Pvlii~G~~D~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~gH~~~~~~~~~~~~~~~~~~~~l~~~~ 312 (342)
T 3hju_A 246 -TVPFLLLQGSADRLCDSKGAYLLMELAK------------SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRT 312 (342)
T ss_dssp -CSCEEEEEETTCSSSCHHHHHHHHHHCC------------CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHHH
T ss_pred -CcCEEEEEeCCCcccChHHHHHHHHHcC------------CCCceEEEECCCCchhhcCChHHHHHHHHHHHHHHhccc
Confidence 6799999999999999998888877764 22468999999999875433 223566778999999887
Q ss_pred C
Q 003878 784 G 784 (789)
Q Consensus 784 ~ 784 (789)
.
T Consensus 313 ~ 313 (342)
T 3hju_A 313 A 313 (342)
T ss_dssp H
T ss_pred C
Confidence 4
No 68
>3d7r_A Esterase; alpha/beta fold, hydrolase; 2.01A {Staphylococcus aureus subsp}
Probab=99.76 E-value=1.1e-17 Score=180.30 Aligned_cols=222 Identities=12% Similarity=0.044 Sum_probs=150.1
Q ss_pred EEEEEEecCCCCCCCCccEEEEEcCCCCccCC-CCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHH
Q 003878 522 IPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFD 600 (789)
Q Consensus 522 i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~ 600 (789)
++++++.|.+ ++.|+||++|||...... ..+......+..+.||.|+++|+||+++... ...++
T Consensus 84 ~~~~~~~p~~----~~~p~vv~lHGgg~~~~~~~~~~~~~~~la~~~g~~vi~~D~r~~~~~~~-----------~~~~~ 148 (326)
T 3d7r_A 84 MQVFRFNFRH----QIDKKILYIHGGFNALQPSPFHWRLLDKITLSTLYEVVLPIYPKTPEFHI-----------DDTFQ 148 (326)
T ss_dssp EEEEEEESTT----CCSSEEEEECCSTTTSCCCHHHHHHHHHHHHHHCSEEEEECCCCTTTSCH-----------HHHHH
T ss_pred EEEEEEeeCC----CCCeEEEEECCCcccCCCCHHHHHHHHHHHHHhCCEEEEEeCCCCCCCCc-----------hHHHH
Confidence 5667777875 456999999998643222 2233333444444699999999999765321 23578
Q ss_pred HHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCc----eeEEEecCCcccccccccccCCccchhhcCCCCc
Q 003878 601 DFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEE 676 (789)
Q Consensus 601 D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~----f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~ 676 (789)
|+.+++++|.++ .++++|+|+|+|+||.+++.++.++|+. ++++|+.+|++++........ ... ........
T Consensus 149 d~~~~~~~l~~~--~~~~~i~l~G~S~GG~lAl~~a~~~~~~~~~~v~~lvl~~p~~~~~~~~~~~~-~~~-~~~~~~~~ 224 (326)
T 3d7r_A 149 AIQRVYDQLVSE--VGHQNVVVMGDGSGGALALSFVQSLLDNQQPLPNKLYLISPILDATLSNKDIS-DAL-IEQDAVLS 224 (326)
T ss_dssp HHHHHHHHHHHH--HCGGGEEEEEETHHHHHHHHHHHHHHHTTCCCCSEEEEESCCCCTTCCCTTCC-HHH-HHHCSSCC
T ss_pred HHHHHHHHHHhc--cCCCcEEEEEECHHHHHHHHHHHHHHhcCCCCCCeEEEECcccccCcCChhHH-hhh-cccCcccC
Confidence 999999999987 6889999999999999999999888776 999999999887643221000 000 00000000
Q ss_pred HHHHH----HHH--------hcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCC
Q 003878 677 EEEFY----WLI--------KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSP 744 (789)
Q Consensus 677 ~~~~~----~l~--------~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~ 744 (789)
..... .+. ..+|+...-. ..||+||++|++|. +..++.++.++|++.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~P~lii~G~~D~--~~~~~~~~~~~l~~~--------- 283 (326)
T 3d7r_A 225 QFGVNEIMKKWANGLPLTDKRISPINGTIE----------GLPPVYMFGGGREM--THPDMKLFEQMMLQH--------- 283 (326)
T ss_dssp HHHHHHHHHHHHTTSCTTSTTTSGGGSCCT----------TCCCEEEEEETTST--THHHHHHHHHHHHHT---------
T ss_pred HHHHHHHHHHhcCCCCCCCCeECcccCCcc----------cCCCEEEEEeCccc--chHHHHHHHHHHHHC---------
Confidence 11111 111 1233332111 35899999999996 456788899999987
Q ss_pred CCCcEEEEEeCCCCcCCCCc-hhhHHHHHHHHHHHHHHHhC
Q 003878 745 QTNPIIGRIERKAGHGVGLP-TQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 745 ~~~~~~l~~~~~~gH~~~~~-~~~~~~~~~~~~~fl~~~l~ 784 (789)
+.++++.+++++||.+... ..+..+....+.+||.++++
T Consensus 284 -~~~~~~~~~~g~~H~~~~~~~~~~~~~~~~i~~fl~~~l~ 323 (326)
T 3d7r_A 284 -HQYIEFYDYPKMVHDFPIYPIRQSHKAIKQIAKSIDEDVT 323 (326)
T ss_dssp -TCCEEEEEETTCCTTGGGSSSHHHHHHHHHHHHHHTSCCC
T ss_pred -CCcEEEEEeCCCcccccccCCHHHHHHHHHHHHHHHHHhh
Confidence 8899999999999987541 12335677889999987764
No 69
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=99.76 E-value=9.5e-18 Score=199.65 Aligned_cols=253 Identities=14% Similarity=0.112 Sum_probs=165.9
Q ss_pred CCCCCCcEEEEEE-----ecCCCceE--EEEEEEecCCCCCCCCccEEEEEcC--CCCcc------------------C-
Q 003878 501 FDRSEFHVHQVFV-----PSKDGSTK--IPMFIVSKKNIKLDGSHPCLLYGYG--GFNIS------------------V- 552 (789)
Q Consensus 501 ~~~~~~~~~~~~~-----~s~dg~~~--i~~~l~~p~~~~~~~~~P~ll~~hG--g~~~~------------------~- 552 (789)
|+......+.+++ +..|| ++ |.+.|+.|++ .++.|+||..|| +.+.. .
T Consensus 161 ~~~~~~~~e~~~ve~~v~~~~DG-~~d~L~a~l~~P~~---~~k~PvIv~~~pYg~~~~~~~~~~~~~~~~~~l~~~~p~ 236 (763)
T 1lns_A 161 FDSSLLEREVLWVESPVDSEQRG-ENDLIKIQIIRPKS---TEKLPVVMTASPYHLGINDKANDLALHDMNVELEEKTSH 236 (763)
T ss_dssp SCGGGCEEEEEEEECSCCTTCSS-SCCEEEEEEEECCC---SSCEEEEEEECSSTTCCCHHHHHHHCCCCCCCCCCCCSE
T ss_pred cCCccceeeeeEEecCcccCCCC-CeeeEEEEEEecCC---CCcccEEEecCCcCCCCcccccccccccccccccccCcc
Confidence 3433344445554 46899 99 9999999997 368999996544 32110 0
Q ss_pred -------------------------CCCCC----HHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHH
Q 003878 553 -------------------------TPSFS----VSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFI 603 (789)
Q Consensus 553 -------------------------~~~~~----~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~ 603 (789)
...|. ......+.++||+|+.+|+||.|+.+..+ ........+|+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~GYaVv~~D~RG~G~S~G~~-----~~~~~~e~~D~~ 311 (763)
T 1lns_A 237 EIHVEQKLPQKLSAKAKELPIVDKAPYRFTHGWTYSLNDYFLTRGFASIYVAGVGTRSSDGFQ-----TSGDYQQIYSMT 311 (763)
T ss_dssp ECCCCCCCCCCCCCCCCCCCEESSCSCBCCCCCCCHHHHHHHTTTCEEEEECCTTSTTSCSCC-----CTTSHHHHHHHH
T ss_pred ccccccccccccccccccccccccchhccccccccchHHHHHHCCCEEEEECCCcCCCCCCcC-----CCCCHHHHHHHH
Confidence 01111 11234555699999999999988754332 122234579999
Q ss_pred HHHHHHHHc---------------CCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccccc------
Q 003878 604 SASEYLISA---------------GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFT------ 662 (789)
Q Consensus 604 ~~~~~L~~~---------------~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~------ 662 (789)
++++||..+ .+ +.+||+++|+|+||++++++|.++|+.++|+|+.+|+.|+.......
T Consensus 312 a~IdwL~~~~~~~~d~~~~~~v~q~~-~~grVgl~G~SyGG~ial~~Aa~~p~~lkaiV~~~~~~d~~~~~~~~g~~~~~ 390 (763)
T 1lns_A 312 AVIDWLNGRARAYTSRKKTHEIKASW-ANGKVAMTGKSYLGTMAYGAATTGVEGLELILAEAGISSWYNYYRENGLVRSP 390 (763)
T ss_dssp HHHHHHTTSSCEESSTTCCCEECCTT-EEEEEEEEEETHHHHHHHHHHTTTCTTEEEEEEESCCSBHHHHHBSSSSBCCC
T ss_pred HHHHHHhhcccccccccccccccccC-CCCcEEEEEECHHHHHHHHHHHhCCcccEEEEEecccccHHHHhhhcchhhhc
Confidence 999999843 23 45799999999999999999999999999999999998754321100
Q ss_pred CC-ccc----hhh--cCCCCcH-------HHH-------------------HHHHhcCcccCCCCCCCCCCCCCCCCCeE
Q 003878 663 IG-HAW----VSD--FGCSEEE-------EEF-------------------YWLIKYSPLHNVRRPWEQNPDKPFQYPST 709 (789)
Q Consensus 663 ~~-~~~----~~e--~g~p~~~-------~~~-------------------~~l~~~sP~~~v~~~~~~~~~~~~~~pp~ 709 (789)
.+ ..+ ... +.....+ +.+ +++...+|..+++++ .+|+
T Consensus 391 ~g~~~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~s~~~~l~~I----------~~Pv 460 (763)
T 1lns_A 391 GGFPGEDLDVLAALTYSRNLDGADFLKGNAEYEKRLAEMTAALDRKSGDYNQFWHDRNYLINTDKV----------KADV 460 (763)
T ss_dssp TTCTTCCHHHHHHHHCGGGGSHHHHHHHHHHHHHHHHHHHHHHCTTTCCCCHHHHTTBGGGGGGGC----------CSEE
T ss_pred ccCCchhhhHHhHHHHhhhcCcchhhhHHHHHHHHHHHHHhhhhhccCchhHHhhccChhhHhhcC----------CCCE
Confidence 00 000 000 0000000 000 112344666667666 7899
Q ss_pred EEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCC
Q 003878 710 LLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 710 Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
|++||.+|..||+.++.+++++|+. +.+..+.+ .++||....... ..+....+.+||+++|+..
T Consensus 461 Lii~G~~D~~vp~~~a~~l~~al~~-----------~~~~~l~i-~~~gH~~~~~~~-~~~~~~~i~~Ffd~~Lkg~ 524 (763)
T 1lns_A 461 LIVHGLQDWNVTPEQAYNFWKALPE-----------GHAKHAFL-HRGAHIYMNSWQ-SIDFSETINAYFVAKLLDR 524 (763)
T ss_dssp EEEEETTCCSSCTHHHHHHHHHSCT-----------TCCEEEEE-ESCSSCCCTTBS-SCCHHHHHHHHHHHHHTTC
T ss_pred EEEEECCCCCCChHHHHHHHHhhcc-----------CCCeEEEE-eCCcccCccccc-hHHHHHHHHHHHHHHhcCC
Confidence 9999999999999999999998863 34556655 578998643211 1245678999999999753
No 70
>3mve_A FRSA, UPF0255 protein VV1_0328; FRSA,fermentation/respiration switch protein, hydrolase ACTI lyase; 2.20A {Vibrio vulnificus} PDB: 3our_A
Probab=99.75 E-value=2.4e-17 Score=183.49 Aligned_cols=235 Identities=10% Similarity=0.013 Sum_probs=158.7
Q ss_pred CcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChh
Q 003878 506 FHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 585 (789)
Q Consensus 506 ~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~ 585 (789)
...+.+.++. +| .+|+++++.|++ .++.|+||++||..+.... .+. .....+.++||.|+.+|+||.|+....
T Consensus 166 ~~~~~v~i~~-~g-~~l~~~~~~P~~---~~~~P~vv~~hG~~~~~~~-~~~-~~~~~l~~~G~~V~~~D~~G~G~s~~~ 238 (415)
T 3mve_A 166 YIIKQLEIPF-EK-GKITAHLHLTNT---DKPHPVVIVSAGLDSLQTD-MWR-LFRDHLAKHDIAMLTVDMPSVGYSSKY 238 (415)
T ss_dssp SEEEEEEEEC-SS-SEEEEEEEESCS---SSCEEEEEEECCTTSCGGG-GHH-HHHHTTGGGTCEEEEECCTTSGGGTTS
T ss_pred CCeEEEEEEE-CC-EEEEEEEEecCC---CCCCCEEEEECCCCccHHH-HHH-HHHHHHHhCCCEEEEECCCCCCCCCCC
Confidence 4567888887 78 899999999986 4678999999997544222 222 233555559999999999997754211
Q ss_pred HHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc---cc
Q 003878 586 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK---FT 662 (789)
Q Consensus 586 ~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~---~~ 662 (789)
......-....++++++...+.+|+++|+++|+|+||++++.++..+|++++++|+..|+++...... ..
T Consensus 239 -------~~~~~~~~~~~~v~~~l~~~~~vd~~~i~l~G~S~GG~~a~~~a~~~~~~v~~~v~~~~~~~~~~~~~~~~~~ 311 (415)
T 3mve_A 239 -------PLTEDYSRLHQAVLNELFSIPYVDHHRVGLIGFRFGGNAMVRLSFLEQEKIKACVILGAPIHDIFASPQKLQQ 311 (415)
T ss_dssp -------CCCSCTTHHHHHHHHHGGGCTTEEEEEEEEEEETHHHHHHHHHHHHTTTTCCEEEEESCCCSHHHHCHHHHTT
T ss_pred -------CCCCCHHHHHHHHHHHHHhCcCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEECCccccccccHHHHHH
Confidence 11111223335678888888878999999999999999999999999999999999999865321100 00
Q ss_pred CCc----cchhhcCCC-Cc-HHHHHHHHhcCcccC----CCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHH
Q 003878 663 IGH----AWVSDFGCS-EE-EEEFYWLIKYSPLHN----VRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATM 732 (789)
Q Consensus 663 ~~~----~~~~e~g~p-~~-~~~~~~l~~~sP~~~----v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L 732 (789)
... .+...+|.. .. .+....+..+++... +.++ .+|+|+++|++|..||+.++.++.+
T Consensus 312 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----------~~PvLii~G~~D~~vp~~~~~~l~~-- 379 (415)
T 3mve_A 312 MPKMYLDVLASRLGKSVVDIYSLSGQMAAWSLKVQGFLSSRKT----------KVPILAMSLEGDPVSPYSDNQMVAF-- 379 (415)
T ss_dssp SCHHHHHHHHHHTTCSSBCHHHHHHHGGGGCTTTTTTTTSSCB----------SSCEEEEEETTCSSSCHHHHHHHHH--
T ss_pred hHHHHHHHHHHHhCCCccCHHHHHHHHhhcCcccccccccCCC----------CCCEEEEEeCCCCCCCHHHHHHHHH--
Confidence 000 011123332 22 222333444544332 2233 6899999999999999998887665
Q ss_pred HHhhccCCCCCCCCCcEEEEEeCC-CCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 733 QYVLCTSLENSPQTNPIIGRIERK-AGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~~~~-~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
. +.+.+++++++ .+|. ...+....+.+||.++|+
T Consensus 380 --~----------~~~~~l~~i~g~~~h~------~~~~~~~~i~~fL~~~L~ 414 (415)
T 3mve_A 380 --F----------STYGKAKKISSKTITQ------GYEQSLDLAIKWLEDELL 414 (415)
T ss_dssp --T----------BTTCEEEEECCCSHHH------HHHHHHHHHHHHHHHHHT
T ss_pred --h----------CCCceEEEecCCCccc------chHHHHHHHHHHHHHHhc
Confidence 3 45568889988 3332 224567789999999875
No 71
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=99.75 E-value=1.6e-18 Score=181.29 Aligned_cols=206 Identities=11% Similarity=0.026 Sum_probs=139.5
Q ss_pred CCCccEEEEEcCCCCcc---CCCCCCHHHHHHH----HcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHH
Q 003878 535 DGSHPCLLYGYGGFNIS---VTPSFSVSRTILM----RHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASE 607 (789)
Q Consensus 535 ~~~~P~ll~~hGg~~~~---~~~~~~~~~~~~l----~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~ 607 (789)
.++.|+||++|||.... ....|.. ....| .++||.|+++|+|++++. .....++|+.++++
T Consensus 38 ~~~~p~vv~lHGgg~~~g~~~~~~~~~-~~~~L~~~a~~~g~~vi~~d~r~~~~~-----------~~~~~~~d~~~~~~ 105 (273)
T 1vkh_A 38 QNTREAVIYIHGGAWNDPENTPNDFNQ-LANTIKSMDTESTVCQYSIEYRLSPEI-----------TNPRNLYDAVSNIT 105 (273)
T ss_dssp TTCCEEEEEECCSTTTCTTCCGGGGHH-HHHHHHHHCTTCCEEEEEECCCCTTTS-----------CTTHHHHHHHHHHH
T ss_pred CCCCeEEEEECCCcccCCcCChHHHHH-HHHHHhhhhccCCcEEEEeecccCCCC-----------CCCcHHHHHHHHHH
Confidence 45789999999976432 1223333 34455 458999999999987642 12345789999999
Q ss_pred HHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-----------------CCceeEEEecCCcccccccccccCC-ccchh
Q 003878 608 YLISAGYTQSRKLCIEGGSNGGLLVGACINQR-----------------PDLFGCALAHVGVMDMLRYHKFTIG-HAWVS 669 (789)
Q Consensus 608 ~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-----------------pd~f~a~v~~~p~~d~~~~~~~~~~-~~~~~ 669 (789)
+++++ .++++++++|+|+||.+++.++.++ |+.++++|+.+|+.++......... ..+..
T Consensus 106 ~l~~~--~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~ 183 (273)
T 1vkh_A 106 RLVKE--KGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIYSLKELLIEYPEYDCFTR 183 (273)
T ss_dssp HHHHH--HTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCCCHHHHHHHCGGGHHHHH
T ss_pred HHHHh--CCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccccHHHhhhhcccHHHHHH
Confidence 99987 5778999999999999999999885 7899999999998876433211000 00001
Q ss_pred -hcCC-CCcHHHHHHHHhcCccc--CCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCC
Q 003878 670 -DFGC-SEEEEEFYWLIKYSPLH--NVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQ 745 (789)
Q Consensus 670 -e~g~-p~~~~~~~~l~~~sP~~--~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~ 745 (789)
.++. +.... +.....+|+. ..... .+|+|+++|++|..||+.++.+++++|+..
T Consensus 184 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----------~~P~lii~G~~D~~vp~~~~~~~~~~l~~~---------- 241 (273)
T 1vkh_A 184 LAFPDGIQMYE--EEPSRVMPYVKKALSRF----------SIDMHLVHSYSDELLTLRQTNCLISCLQDY---------- 241 (273)
T ss_dssp HHCTTCGGGCC--CCHHHHHHHHHHHHHHH----------TCEEEEEEETTCSSCCTHHHHHHHHHHHHT----------
T ss_pred HHhcccccchh--hcccccChhhhhccccc----------CCCEEEEecCCcCCCChHHHHHHHHHHHhc----------
Confidence 1111 10000 0001111211 01112 579999999999999999999999999987
Q ss_pred CCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHH
Q 003878 746 TNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 779 (789)
Q Consensus 746 ~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl 779 (789)
+.++++.+++++||...... .+..+.+.+||
T Consensus 242 ~~~~~~~~~~~~gH~~~~~~---~~~~~~i~~fl 272 (273)
T 1vkh_A 242 QLSFKLYLDDLGLHNDVYKN---GKVAKYIFDNI 272 (273)
T ss_dssp TCCEEEEEECCCSGGGGGGC---HHHHHHHHHTC
T ss_pred CCceEEEEeCCCcccccccC---hHHHHHHHHHc
Confidence 88999999999999864333 24445555554
No 72
>1r88_A MPT51/MPB51 antigen; ALFA/beta hydrolase fold, FBPC1, immune system; 1.71A {Mycobacterium tuberculosis} SCOP: c.69.1.3
Probab=99.74 E-value=2e-17 Score=174.17 Aligned_cols=241 Identities=13% Similarity=0.070 Sum_probs=159.8
Q ss_pred CcEEEEEEecC-CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCH--HHHHHHHcCCeEEEEEeecCCCCC
Q 003878 506 FHVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSV--SRTILMRHLGAVFCIANIRGGGEY 582 (789)
Q Consensus 506 ~~~~~~~~~s~-dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~--~~~~~l~~~G~~v~~~~~RG~g~~ 582 (789)
...+.+.+.|. +| .+++++ +.|++ .|+|+++||+.+......|.. ....++++.|++|+++|.++++.|
T Consensus 9 ~~~~~~~~~S~~~~-~~~~~~-~~P~~------~p~vvllHG~~~~~~~~~w~~~~~~~~~~~~~~~~vv~pd~~~~~~~ 80 (280)
T 1r88_A 9 APYENLMVPSPSMG-RDIPVA-FLAGG------PHAVYLLDAFNAGPDVSNWVTAGNAMNTLAGKGISVVAPAGGAYSMY 80 (280)
T ss_dssp CCCEEEEEEETTTT-EEEEEE-EECCS------SSEEEEECCSSCCSSSCHHHHTSCHHHHHTTSSSEEEEECCCTTSTT
T ss_pred CCEEEEEEECcccC-CcceEE-EeCCC------CCEEEEECCCCCCCChhhhhhcccHHHHHhcCCeEEEEECCCCCCcc
Confidence 34567777775 78 999999 77764 289999999853222222221 134667778999999999776544
Q ss_pred ChhHHhcccccCCcchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc
Q 003878 583 GEEWHKGGALAKKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK 660 (789)
Q Consensus 583 g~~~~~~~~~~~~~~~~~D~~--~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~ 660 (789)
. .|.... ...+.+++ +.+.++.++--+++++++|+|+|+||++++.++.++|++|+++|+.+|.+++.....
T Consensus 81 ~-~~~~~~-----~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~~ 154 (280)
T 1r88_A 81 T-NWEQDG-----SKQWDTFLSAELPDWLAANRGLAPGGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMSGFLYPSNTTT 154 (280)
T ss_dssp S-BCSSCT-----TCBHHHHHHTHHHHHHHHHSCCCSSCEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCCCTTSHHH
T ss_pred C-CCCCCC-----CCcHHHHHHHHHHHHHHHHCCCCCCceEEEEECHHHHHHHHHHHhCccceeEEEEECCccCcCCccc
Confidence 2 121111 01333322 234444443336888999999999999999999999999999999999887543210
Q ss_pred ---------ccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEe----cCCCCC-------C
Q 003878 661 ---------FTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLT----ADHDDR-------V 720 (789)
Q Consensus 661 ---------~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~----g~~D~~-------V 720 (789)
......+...||.+... .+.+.+|+.++++.- ...+|+++.| |+.|.+ |
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~~~-------~~~~pv~i~~~~~~G~~D~~~~~~~~~~ 223 (280)
T 1r88_A 155 NGAIAAGMQQFGGVDTNGMWGAPQLG----RWKWHDPWVHASLLA-------QNNTRVWVWSPTNPGASDPAAMIGQAAE 223 (280)
T ss_dssp HHHHHHHHHHHHCCCTHHHHCCGGGS----TTGGGCTTTTHHHHH-------HTTCEEEEECCSSCCCSSGGGGTTCHHH
T ss_pred hhhHHHHhhhccccchhhhcCCCchh----hhHhcCHHHHHHhhh-------ccCCeEEEEeccCCCCCCcccccchhHH
Confidence 00000112335554321 134567776554310 0147999999 999985 6
Q ss_pred CcHHHHHHHHHHHHhhccCCCCCCCC-CcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 721 VPLHSLKLLATMQYVLCTSLENSPQT-NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 721 ~~~~~~~~~~~L~~~~~~~~~~~~~~-~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
++.++.+++++|++. | .++++.++++++|.+.. ....+...+.|+.+.|..
T Consensus 224 ~~~~~~~~~~~L~~~----------g~~~~~~~~~~~g~H~~~~----w~~~l~~~l~~~~~~~~~ 275 (280)
T 1r88_A 224 AMGNSRMFYNQYRSV----------GGHNGHFDFPASGDNGWGS----WAPQLGAMSGDIVGAIRH 275 (280)
T ss_dssp HHHHHHHHHHHHHHT----------TCCSEEEECCSSCCSSHHH----HHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHC----------CCcceEEEecCCCCcChhH----HHHHHHHHHHHHHHHHhh
Confidence 889999999999987 8 99999999899997532 234566778888877643
No 73
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=99.74 E-value=2.6e-17 Score=164.86 Aligned_cols=185 Identities=14% Similarity=-0.022 Sum_probs=133.6
Q ss_pred CCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHh-----c-ccccC----CcchHHHHHH
Q 003878 535 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK-----G-GALAK----KQNCFDDFIS 604 (789)
Q Consensus 535 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~-----~-~~~~~----~~~~~~D~~~ 604 (789)
+++.| ||++||..+... .|.. ....+. .|+.|+.++.++....+..|+. . ..... -....+++.+
T Consensus 14 ~~~~p-vv~lHG~g~~~~--~~~~-~~~~l~-~~~~v~~~~~~~~~~g~~~~~~~~g~g~~~~~~~~~~~~~~~~~~~~~ 88 (209)
T 3og9_A 14 KDLAP-LLLLHSTGGDEH--QLVE-IAEMIA-PSHPILSIRGRINEQGVNRYFKLRGLGGFTKENFDLESLDEETDWLTD 88 (209)
T ss_dssp TTSCC-EEEECCTTCCTT--TTHH-HHHHHS-TTCCEEEECCSBCGGGCCBSSCBCSCTTCSGGGBCHHHHHHHHHHHHH
T ss_pred CCCCC-EEEEeCCCCCHH--HHHH-HHHhcC-CCceEEEecCCcCCCCcccceecccccccccCCCCHHHHHHHHHHHHH
Confidence 35678 999999765432 3433 455666 8999999996643333444544 1 00011 1123456666
Q ss_pred HHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHH
Q 003878 605 ASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLI 684 (789)
Q Consensus 605 ~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~ 684 (789)
.++.+.++..+|+++++++|+|+||.+++.++.++|++++++|+.+|......
T Consensus 89 ~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~--------------------------- 141 (209)
T 3og9_A 89 EVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKINFDKIIAFHGMQLEDF--------------------------- 141 (209)
T ss_dssp HHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSCCCSEEEEESCCCCCCC---------------------------
T ss_pred HHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCcccceEEEECCCCCCcc---------------------------
Confidence 77777666567899999999999999999999999999999999888653100
Q ss_pred hcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc
Q 003878 685 KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP 764 (789)
Q Consensus 685 ~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~ 764 (789)
...... ..+|+|++||++|..||++++.+++++|++. +.++++.+++ +||.+..
T Consensus 142 ----~~~~~~----------~~~p~li~~G~~D~~v~~~~~~~~~~~l~~~----------~~~~~~~~~~-~gH~~~~- 195 (209)
T 3og9_A 142 ----EQTVQL----------DDKHVFLSYAPNDMIVPQKNFGDLKGDLEDS----------GCQLEIYESS-LGHQLTQ- 195 (209)
T ss_dssp ----CCCCCC----------TTCEEEEEECTTCSSSCHHHHHHHHHHHHHT----------TCEEEEEECS-STTSCCH-
T ss_pred ----cccccc----------cCCCEEEEcCCCCCccCHHHHHHHHHHHHHc----------CCceEEEEcC-CCCcCCH-
Confidence 001112 2689999999999999999999999999988 8899999997 7999842
Q ss_pred hhhHHHHHHHHHHHHHHH
Q 003878 765 TQKMIDEAADRYGFMAKM 782 (789)
Q Consensus 765 ~~~~~~~~~~~~~fl~~~ 782 (789)
+....+.+||.+.
T Consensus 196 -----~~~~~~~~~l~~~ 208 (209)
T 3og9_A 196 -----EEVLAAKKWLTET 208 (209)
T ss_dssp -----HHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHhh
Confidence 4456788888764
No 74
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.74 E-value=4.2e-15 Score=165.57 Aligned_cols=264 Identities=15% Similarity=0.087 Sum_probs=179.5
Q ss_pred CCEEEEEEEcCCCC-eeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCC
Q 003878 90 GNKYFYFHNTGLQP-QSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ 168 (789)
Q Consensus 90 g~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg 168 (789)
+.++.|.....+.. ...|++.+..++..+.|.... ..+..++|||||++|||+...+| ..+|++||+++|
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~-------~~v~~~~~Spdg~~la~~s~~~~--~~~i~~~d~~tg 213 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSP-------QPLMSPAWSPDGSKLAYVTFESG--RSALVIQTLANG 213 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEES-------SCEEEEEECTTSSEEEEEECTTS--SCEEEEEETTTC
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCC-------CcceeeEEcCCCCEEEEEEecCC--CcEEEEEECCCC
Confidence 66777777654321 245777665444445555432 23678999999999999886544 368999999998
Q ss_pred ceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcE
Q 003878 169 IVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKG 248 (789)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~ 248 (789)
+... +....+ ....++|||||+.
T Consensus 214 ~~~~--l~~~~~-------------------------------------------------------~~~~~~~spdg~~ 236 (415)
T 2hqs_A 214 AVRQ--VASFPR-------------------------------------------------------HNGAPAFSPDGSK 236 (415)
T ss_dssp CEEE--EECCSS-------------------------------------------------------CEEEEEECTTSSE
T ss_pred cEEE--eecCCC-------------------------------------------------------cccCEEEcCCCCE
Confidence 6542 221100 1478999999999
Q ss_pred EEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEE
Q 003878 249 FFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKV 328 (789)
Q Consensus 249 i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i 328 (789)
|+|+.... ...+|+++++.++.. ..+. .+......+.|||||++|++.+.+.. ...|
T Consensus 237 la~~~~~~----------------g~~~i~~~d~~~~~~--~~l~---~~~~~~~~~~~spdg~~l~~~s~~~g--~~~i 293 (415)
T 2hqs_A 237 LAFALSKT----------------GSLNLYVMDLASGQI--RQVT---DGRSNNTEPTWFPDSQNLAFTSDQAG--RPQV 293 (415)
T ss_dssp EEEEECTT----------------SSCEEEEEETTTCCE--EECC---CCSSCEEEEEECTTSSEEEEEECTTS--SCEE
T ss_pred EEEEEecC----------------CCceEEEEECCCCCE--EeCc---CCCCcccceEECCCCCEEEEEECCCC--CcEE
Confidence 99885421 234699999977532 2222 22334568899999999999875432 4679
Q ss_pred EEEECCCCCCCcccccccCCCCccEeeecc-ccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCc
Q 003878 329 YYCDLSALPEGLEGFKKRDGLLPFVKLIDG-FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERD 407 (789)
Q Consensus 329 ~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~ 407 (789)
|++|+.++. ...+... .......|+|||+.|++.+..+ ....|+++|+++++ .+.+..+.
T Consensus 294 ~~~d~~~~~--------------~~~l~~~~~~~~~~~~spdG~~l~~~~~~~-g~~~i~~~d~~~~~-~~~l~~~~--- 354 (415)
T 2hqs_A 294 YKVNINGGA--------------PQRITWEGSQNQDADVSSDGKFMVMVSSNG-GQQHIAKQDLATGG-VQVLSSTF--- 354 (415)
T ss_dssp EEEETTSSC--------------CEECCCSSSEEEEEEECTTSSEEEEEEECS-SCEEEEEEETTTCC-EEECCCSS---
T ss_pred EEEECCCCC--------------EEEEecCCCcccCeEECCCCCEEEEEECcC-CceEEEEEECCCCC-EEEecCCC---
Confidence 999998752 1222221 1112356999999999887654 35799999999876 45544332
Q ss_pred eeeeEEEecCC-EEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCC
Q 003878 408 VLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARRED 462 (789)
Q Consensus 408 ~i~~v~~~~~~-~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~ 462 (789)
.+..++|++++ .|++....++...|++||++ |+..+.|+.+.+.+..++|+|..
T Consensus 355 ~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 355 LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp SCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEECCCC
T ss_pred CcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCcccccc
Confidence 56788899864 46666666777899999998 55457787777888888888753
No 75
>4fhz_A Phospholipase/carboxylesterase; alpha/beta hydrolase superfamily, central beta-STR sheet, flanked alpha helices, hydrolase; 2.01A {Rhodobacter sphaeroides} PDB: 4ftw_A*
Probab=99.74 E-value=1.4e-17 Score=175.13 Aligned_cols=204 Identities=15% Similarity=0.138 Sum_probs=141.6
Q ss_pred eEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHc--CCeEEEEEeec---CCCCCChhHHhcccccC
Q 003878 520 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH--LGAVFCIANIR---GGGEYGEEWHKGGALAK 594 (789)
Q Consensus 520 ~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~R---G~g~~g~~~~~~~~~~~ 594 (789)
.+...+...|.. ++++.|+||++||..+.... |.. +...+.. .++.+++++-. ...+.|..|+.......
T Consensus 50 ~~~l~y~~~p~~--~~~~~plVI~LHG~G~~~~~--~~~-~~~~l~~~~~~~~~v~P~Ap~~~~~~~~G~~Wfd~~~~~~ 124 (285)
T 4fhz_A 50 TRKLTFGRRGAA--PGEATSLVVFLHGYGADGAD--LLG-LAEPLAPHLPGTAFVAPDAPEPCRANGFGFQWFPIPWLDG 124 (285)
T ss_dssp CCCCCEEEEESC--TTCCSEEEEEECCTTBCHHH--HHT-THHHHGGGSTTEEEEEECCSEECTTSSSCEESSCCHHHHC
T ss_pred cccceeecCCCC--CCCCCcEEEEEcCCCCCHHH--HHH-HHHHHHHhCCCeEEEecCCCcccccCCCcccccccccccC
Confidence 444344445543 56788999999995432211 111 1223322 38888888732 22345667753211110
Q ss_pred --C-------cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCc
Q 003878 595 --K-------QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGH 665 (789)
Q Consensus 595 --~-------~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~ 665 (789)
. .....++.+.++.++++.-+|++||+++|+|+||.+++.++.++|+.|+++|+.++.+..
T Consensus 125 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~id~~ri~l~GfS~Gg~~a~~~a~~~p~~~a~vv~~sG~l~~---------- 194 (285)
T 4fhz_A 125 SSETAAAEGMAAAARDLDAFLDERLAEEGLPPEALALVGFSQGTMMALHVAPRRAEEIAGIVGFSGRLLA---------- 194 (285)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSSSCCSEEEEESCCCSC----------
T ss_pred cccchhhHHHHHHHHHHHHHHHHHHHHhCCCccceEEEEeCHHHHHHHHHHHhCcccCceEEEeecCccC----------
Confidence 1 112356666777777776689999999999999999999999999999999987764310
Q ss_pred cchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCC
Q 003878 666 AWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQ 745 (789)
Q Consensus 666 ~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~ 745 (789)
++.. .. . .. ..+|+|++||++|++||++++.+++++|+++
T Consensus 195 -----------~~~~---~~-----~-~~----------~~~Pvl~~hG~~D~~Vp~~~~~~~~~~L~~~---------- 234 (285)
T 4fhz_A 195 -----------PERL---AE-----E-AR----------SKPPVLLVHGDADPVVPFADMSLAGEALAEA---------- 234 (285)
T ss_dssp -----------HHHH---HH-----H-CC----------CCCCEEEEEETTCSSSCTHHHHHHHHHHHHT----------
T ss_pred -----------chhh---hh-----h-hh----------hcCcccceeeCCCCCcCHHHHHHHHHHHHHC----------
Confidence 1111 00 0 11 2579999999999999999999999999998
Q ss_pred CCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 746 TNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 746 ~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
|.++++++|++.||++. .+++.++.+||.++|.
T Consensus 235 g~~~~~~~y~g~gH~i~------~~~l~~~~~fL~~~Lp 267 (285)
T 4fhz_A 235 GFTTYGHVMKGTGHGIA------PDGLSVALAFLKERLP 267 (285)
T ss_dssp TCCEEEEEETTCCSSCC------HHHHHHHHHHHHHHCC
T ss_pred CCCEEEEEECCCCCCCC------HHHHHHHHHHHHHHCc
Confidence 99999999999999874 2456788999999984
No 76
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=99.73 E-value=1.2e-16 Score=165.07 Aligned_cols=235 Identities=14% Similarity=0.135 Sum_probs=151.2
Q ss_pred EEEEEE-ecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhH
Q 003878 508 VHQVFV-PSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 586 (789)
Q Consensus 508 ~~~~~~-~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~ 586 (789)
.+.+.+ .+.|| .+|.+....+++ .+.|+||++||+.+......+. ....++.++||.|+.+|+||.|......
T Consensus 11 ~~~~~~~~~~~g-~~l~~~~~~~~~----~~~~~vv~~HG~~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~G~G~s~~~~ 84 (270)
T 3llc_A 11 THAITVGQGSDA-RSIAALVRAPAQ----DERPTCIWLGGYRSDMTGTKAL-EMDDLAASLGVGAIRFDYSGHGASGGAF 84 (270)
T ss_dssp EEEEEESSGGGC-EEEEEEEECCSS----TTSCEEEEECCTTCCTTSHHHH-HHHHHHHHHTCEEEEECCTTSTTCCSCG
T ss_pred cceEEEeeccCc-ceEEEEeccCCC----CCCCeEEEECCCccccccchHH-HHHHHHHhCCCcEEEeccccCCCCCCcc
Confidence 344555 56799 899887665442 2469999999976553332222 2456665689999999999988654322
Q ss_pred HhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHh---CC---CceeEEEecCCccccccccc
Q 003878 587 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ---RP---DLFGCALAHVGVMDMLRYHK 660 (789)
Q Consensus 587 ~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~---~p---d~f~a~v~~~p~~d~~~~~~ 660 (789)
....+++..+.+..+++. ...++++++|+|+||.+++.++.+ +| ++++++|+..|..++.....
T Consensus 85 --------~~~~~~~~~~d~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~~~~~~~~ 154 (270)
T 3llc_A 85 --------RDGTISRWLEEALAVLDH--FKPEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAPDFTSDLI 154 (270)
T ss_dssp --------GGCCHHHHHHHHHHHHHH--HCCSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCTTHHHHTT
T ss_pred --------ccccHHHHHHHHHHHHHH--hccCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcccchhhhh
Confidence 122344444433333332 125799999999999999999999 99 99999999999877643211
Q ss_pred cc-CCcc----c--------hhhcC-CC--CcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHH
Q 003878 661 FT-IGHA----W--------VSDFG-CS--EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH 724 (789)
Q Consensus 661 ~~-~~~~----~--------~~e~g-~p--~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~ 724 (789)
.. .... + ...+. .+ .................+..+ ..|+|+++|.+|..|++.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~P~l~i~g~~D~~v~~~~ 224 (270)
T 3llc_A 155 EPLLGDRERAELAENGYFEEVSEYSPEPNIFTRALMEDGRANRVMAGMIDT----------GCPVHILQGMADPDVPYQH 224 (270)
T ss_dssp GGGCCHHHHHHHHHHSEEEECCTTCSSCEEEEHHHHHHHHHTCCTTSCCCC----------CSCEEEEEETTCSSSCHHH
T ss_pred hhhhhhhhhhhhhccCcccChhhcccchhHHHHHHHhhhhhhhhhhhhhcC----------CCCEEEEecCCCCCCCHHH
Confidence 00 0000 0 01111 11 122334444454445555554 6899999999999999999
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 725 SLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 725 ~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
+.++.+.+. +..+++.+++++||.+..... ..+....+.+||.+
T Consensus 225 ~~~~~~~~~------------~~~~~~~~~~~~gH~~~~~~~-~~~~~~~i~~fl~~ 268 (270)
T 3llc_A 225 ALKLVEHLP------------ADDVVLTLVRDGDHRLSRPQD-IDRMRNAIRAMIEP 268 (270)
T ss_dssp HHHHHHTSC------------SSSEEEEEETTCCSSCCSHHH-HHHHHHHHHHHHC-
T ss_pred HHHHHHhcC------------CCCeeEEEeCCCccccccccc-HHHHHHHHHHHhcC
Confidence 888877654 335789999999997654333 23445566666643
No 77
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha sandwich, structural genomics, PSI-2; 1.83A {Bordetella parapertussis 12822}
Probab=99.73 E-value=1.8e-16 Score=168.66 Aligned_cols=226 Identities=11% Similarity=0.036 Sum_probs=148.8
Q ss_pred EEEEEe---cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChh
Q 003878 509 HQVFVP---SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 585 (789)
Q Consensus 509 ~~~~~~---s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~ 585 (789)
..+.+. +.+| .++.++++.|++. ..+.|+||++||+.+... .|...+...+.++||+|+++|+|+.+..+..
T Consensus 25 ~~~~~~~~~~~~~-~~l~~~~~~P~~~--~~~~p~vv~lHG~~~~~~--~~~~~~~~~l~~~g~~v~~~d~~~~~~p~~~ 99 (304)
T 3d0k_A 25 NAIPYLDDDRNAD-RPFTLNTYRPYGY--TPDRPVVVVQHGVLRNGA--DYRDFWIPAADRHKLLIVAPTFSDEIWPGVE 99 (304)
T ss_dssp EEEEECC---CTT-CCEEEEEEECTTC--CTTSCEEEEECCTTCCHH--HHHHHTHHHHHHHTCEEEEEECCTTTSCHHH
T ss_pred ceEEecccCCCCC-ceEEEEEEeCCCC--CCCCcEEEEeCCCCCCHH--HHHHHHHHHHHHCCcEEEEeCCccccCCCcc
Confidence 345666 6788 8999999999864 246799999999876542 2212234566668999999999976322222
Q ss_pred HHhccc--------ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC-ceeEEEecC-Ccccc
Q 003878 586 WHKGGA--------LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD-LFGCALAHV-GVMDM 655 (789)
Q Consensus 586 ~~~~~~--------~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd-~f~a~v~~~-p~~d~ 655 (789)
|+..+. .......++|+.+++++|.++..+|+++|+++|+|+||.+++.++.++|+ .++++|+.. |+.++
T Consensus 100 ~~~~g~~~g~s~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~p~~~~~~~vl~~~~~~~~ 179 (304)
T 3d0k_A 100 SYNNGRAFTAAGNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVTAANPGWYTL 179 (304)
T ss_dssp HTTTTTCBCTTSCBCCGGGSTTHHHHHHHHHHHHTTSCCCSSEEEEEETHHHHHHHHHHHHSCSTTCSEEEEESCSSCCC
T ss_pred ccccCccccccCCCCcccchHHHHHHHHHHHHHhccCCCCCcEEEEEeChHHHHHHHHHHHCCCCceEEEEEecCccccc
Confidence 222111 01123456889999999999877899999999999999999999999995 778777544 76654
Q ss_pred cccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC--------------
Q 003878 656 LRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVV-------------- 721 (789)
Q Consensus 656 ~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~-------------- 721 (789)
..... .| .+|....+ .+|....... .+|+|++||++|..+.
T Consensus 180 ~~~~~-----~~--~~~~~~~~--------~~~~~~~~~~----------~~p~li~~G~~D~~~~~p~~~~~~~~~~~~ 234 (304)
T 3d0k_A 180 PTFEH-----RF--PEGLDGVG--------LTEDHLARLL----------AYPMTILAGDQDIATDDPNLPSEPAALRQG 234 (304)
T ss_dssp SSTTS-----BT--TTSSBTTT--------CCHHHHHHHH----------HSCCEEEEETTCCCC--CCSCCSHHHHTTC
T ss_pred CCccc-----cC--ccccCCCC--------CCHHHHHhhh----------cCCEEEEEeCCCCCccccccccChhhhccC
Confidence 33210 11 11211000 0111111111 4799999999999752
Q ss_pred ---cHHHHHHHHHHH----HhhccCCCCCCCCCc--EEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 722 ---PLHSLKLLATMQ----YVLCTSLENSPQTNP--IIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 722 ---~~~~~~~~~~L~----~~~~~~~~~~~~~~~--~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
...+.++++.++ +. |.+ +++++++++||.+. .....+..||.+
T Consensus 235 ~~~~~~~~~~~~~l~~~a~~~----------g~~~~~~~~~~pg~gH~~~-------~~~~~~~~~~~~ 286 (304)
T 3d0k_A 235 PHRYARARHYYEAGQRAAAQR----------GLPFGWQLQVVPGIGHDGQ-------AMSQVCASLWFD 286 (304)
T ss_dssp SSHHHHHHHHHHHHHHHHHHH----------TCCCCCEEEEETTCCSCHH-------HHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHhc----------CCCcceEEEEeCCCCCchH-------HHHHHHHHHHhh
Confidence 345677777776 44 666 89999999999872 233455666654
No 78
>2qm0_A BES; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: SVY; 1.84A {Bacillus cereus atcc 14579}
Probab=99.73 E-value=1.2e-17 Score=175.47 Aligned_cols=232 Identities=13% Similarity=0.068 Sum_probs=151.9
Q ss_pred cEEEEEEecC-CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCC---eEEEEEeecCCCCC
Q 003878 507 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLG---AVFCIANIRGGGEY 582 (789)
Q Consensus 507 ~~~~~~~~s~-dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G---~~v~~~~~RG~g~~ 582 (789)
..+.+.+.|. +| .++.++++.|++..+++++|+|+++||+........+......+.++.| ++|+.+++|+++.+
T Consensus 17 ~~~~~~~~s~~~g-~~~~~~v~~P~~~~~~~~~Pvl~~lhG~~~~~~~~~~~~~~~~~~~~~g~~~~ivV~i~~~~~~~~ 95 (275)
T 2qm0_A 17 NTEQWKMYSKLEG-KEYQIHISKPKQPAPDSGYPVIYVLDGNAFFQTFHEAVKIQSVRAEKTGVSPAIIVGVGYPIEGAF 95 (275)
T ss_dssp TEEEEEEECTTTC-CEEEEEEECCSSCCCTTCEEEEEEESHHHHHHHHHHHHHHHGGGHHHHCCCCCEEEEEECSCSSSC
T ss_pred CceEEEEEecCCC-CEEEEEEECCCCCCCCCCccEEEEecChHHHHHHHHHHHHHhhcchhcCCCCeEEEEECCCCCCcC
Confidence 4677888887 78 9999999999987666789999999998531110000000111223467 99999999987655
Q ss_pred Chh-H-Hhcccc----------------c-CCcchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC
Q 003878 583 GEE-W-HKGGAL----------------A-KKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD 641 (789)
Q Consensus 583 g~~-~-~~~~~~----------------~-~~~~~~~D~~--~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd 641 (789)
+.. + .+.+.. . .+...+.|++ +.+.++.++.-+|+++++|+|+|+||++++.++.++|+
T Consensus 96 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~l~~~i~~~~~~~~~~~~~~G~S~GG~~a~~~~~~~p~ 175 (275)
T 2qm0_A 96 SGEERCYDFTPSVISKDAPLKPDGKPWPKTGGAHNFFTFIEEELKPQIEKNFEIDKGKQTLFGHXLGGLFALHILFTNLN 175 (275)
T ss_dssp CHHHHHHHHCSSCCCC---------CCCCCCCHHHHHHHHHHTHHHHHHHHSCEEEEEEEEEEETHHHHHHHHHHHHCGG
T ss_pred cccccccccCCCCccccCCccccCCcCCCCCChHHHHHHHHHHHHHHHHhhccCCCCCCEEEEecchhHHHHHHHHhCch
Confidence 421 1 111100 0 0111455544 34455555545789999999999999999999999999
Q ss_pred ceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCC
Q 003878 642 LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVV 721 (789)
Q Consensus 642 ~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~ 721 (789)
+|+++++.+|.+++..... .. ..+.+ +...+ ... ..+|++++||+.|..++
T Consensus 176 ~f~~~~~~s~~~~~~~~~~--------~~-----~~~~~--~~~~~----~~~----------~~~~~~l~~G~~D~~~~ 226 (275)
T 2qm0_A 176 AFQNYFISSPSIWWNNKSV--------LE-----KEENL--IIELN----NAK----------FETGVFLTVGSLEREHM 226 (275)
T ss_dssp GCSEEEEESCCTTHHHHGG--------GG-----GTTHH--HHHHH----TCS----------SCEEEEEEEETTSCHHH
T ss_pred hhceeEEeCceeeeChHHH--------HH-----HHHHH--Hhhhc----ccC----------CCceEEEEeCCcccchh
Confidence 9999999999864321100 00 00111 11111 122 25799999999999999
Q ss_pred cHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 722 PLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 722 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
..++.+++++|++. ...|.++++.++++++|+... ...+.+.+.||.
T Consensus 227 ~~~~~~~~~~L~~~-------~~~g~~~~~~~~~g~~H~~~~-----~~~l~~~l~~l~ 273 (275)
T 2qm0_A 227 VVGANELSERLLQV-------NHDKLKFKFYEAEGENHASVV-----PTSLSKGLRFIS 273 (275)
T ss_dssp HHHHHHHHHHHHHC-------CCTTEEEEEEEETTCCTTTHH-----HHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHhc-------ccCCceEEEEECCCCCccccH-----HHHHHHHHHHHh
Confidence 99999999999532 112889999999999997531 233455666663
No 79
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=99.73 E-value=5.3e-17 Score=186.03 Aligned_cols=241 Identities=12% Similarity=0.087 Sum_probs=162.8
Q ss_pred cEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCC---------------------HHHHHHHH
Q 003878 507 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFS---------------------VSRTILMR 565 (789)
Q Consensus 507 ~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~---------------------~~~~~~l~ 565 (789)
..+.+.++++|| ++|.+.++.|++ .++.|+||+.||. +....+.+. .....+++
T Consensus 40 ~~~~v~i~~~DG-~~L~a~l~~P~~---~~~~P~vl~~~py-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~la 114 (560)
T 3iii_A 40 MEKDGTVEMRDG-EKLYINIFRPNK---DGKFPVVMSADTY-GKDNKPKITNMGALWPTLGTIPTSSFTPEESPDPGFWV 114 (560)
T ss_dssp EEEEEEEECTTS-CEEEEEEEECSS---SSCEEEEEEEESS-CTTCCCC--CHHHHSGGGCCCCCCTTCCTTSCCHHHHG
T ss_pred EEEEEEEECCCC-cEEEEEEEecCC---CCCCCEEEEecCC-CCCcccccccccccccccccccccccccccCCCHHHHH
Confidence 456799999999 999999999986 3789999998874 332221110 00134566
Q ss_pred cCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeE
Q 003878 566 HLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGC 645 (789)
Q Consensus 566 ~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a 645 (789)
++||+|+.+|+||.|+.+..+. .......+|+.++++||.++.+.| .||+++|+|+||+++++++.++|+.++|
T Consensus 115 ~~Gy~vv~~D~RG~G~S~G~~~-----~~~~~~~~D~~~~i~~l~~~~~~~-~~igl~G~S~GG~~al~~a~~~p~~l~a 188 (560)
T 3iii_A 115 PNDYVVVKVALRGSDKSKGVLS-----PWSKREAEDYYEVIEWAANQSWSN-GNIGTNGVSYLAVTQWWVASLNPPHLKA 188 (560)
T ss_dssp GGTCEEEEEECTTSTTCCSCBC-----TTSHHHHHHHHHHHHHHHTSTTEE-EEEEEEEETHHHHHHHHHHTTCCTTEEE
T ss_pred hCCCEEEEEcCCCCCCCCCccc-----cCChhHHHHHHHHHHHHHhCCCCC-CcEEEEccCHHHHHHHHHHhcCCCceEE
Confidence 6999999999999998775543 223467899999999999998887 8999999999999999999999999999
Q ss_pred EEecCCcccccccccccCC-------ccchh----hcC-CCCcHHHH----------HHHHhcCcccCCCCCCCCCCCCC
Q 003878 646 ALAHVGVMDMLRYHKFTIG-------HAWVS----DFG-CSEEEEEF----------YWLIKYSPLHNVRRPWEQNPDKP 703 (789)
Q Consensus 646 ~v~~~p~~d~~~~~~~~~~-------~~~~~----e~g-~p~~~~~~----------~~l~~~sP~~~v~~~~~~~~~~~ 703 (789)
+|+.+|+.|+.+......+ ..|.. .|. .+...+.. ++++..++ ++.++
T Consensus 189 iv~~~~~~d~~~~~~~~gG~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~hp~~d~~W~~~~~--~~~~I-------- 258 (560)
T 3iii_A 189 MIPWEGLNDMYREVAFHGGIPDTGFYRFWTQGIFARWTDNPNIEDLIQAQQEHPLFDDFWKQRQV--PLSQI-------- 258 (560)
T ss_dssp EEEESCCCBHHHHTTEETTEECCSHHHHHHHHHHHHTTTCTTBCCHHHHHHHCCSSCHHHHTTBC--CGGGC--------
T ss_pred EEecCCcccccccceecCCCCchhHHHHHHhhhccccccccchHHHHHHHHHCCCcchHhhccCC--chhhC--------
Confidence 9999999997642111111 11211 011 01000001 12333333 34444
Q ss_pred CCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 704 FQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 704 ~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
..|+|+++|-.|..+....+.+.+++|+.. ...+++.. .+|+. ..-..+..+..++||+++|
T Consensus 259 --~vPvl~v~Gw~D~~~~~~g~l~~y~~l~~~------------~k~l~ih~-~~~~~---~~~~~~~~~~~~~wfD~~L 320 (560)
T 3iii_A 259 --KTPLLTCASWSTQGLHNRGSFEGFKQAASE------------EKWLYVHG-RKEWE---SYYARENLERQKSFFDFYL 320 (560)
T ss_dssp --CSCEEEEEEGGGTTTTHHHHHHHHHHCCCS------------SEEEEEES-SCHHH---HHHSHHHHHHHHHHHHHHT
T ss_pred --CCCEEEeCCcCCCcccchhHHHHHHhcccc------------CcEEEECC-CCCcC---cccChhHHHHHHHHHHHHh
Confidence 789999999999866677777777766532 23455532 22321 0101245577899999999
Q ss_pred CCC
Q 003878 784 GAS 786 (789)
Q Consensus 784 ~~~ 786 (789)
+..
T Consensus 321 kG~ 323 (560)
T 3iii_A 321 KEE 323 (560)
T ss_dssp SCC
T ss_pred CCC
Confidence 753
No 80
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=99.73 E-value=9.2e-17 Score=175.54 Aligned_cols=253 Identities=13% Similarity=0.074 Sum_probs=161.8
Q ss_pred CCCcEEEEEEecCC--C-ceEEEEEEEecCCCCCCCCccEEEEEcCCCCccC-CCCC----CHHHHHHHH-cCCeEEEEE
Q 003878 504 SEFHVHQVFVPSKD--G-STKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSF----SVSRTILMR-HLGAVFCIA 574 (789)
Q Consensus 504 ~~~~~~~~~~~s~d--g-~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~----~~~~~~~l~-~~G~~v~~~ 574 (789)
......++.|.+.| | ++.+.++++.|++. .++.|+|++.||..+... .+.+ .......+. ++||+|+++
T Consensus 39 ~~~~~~~i~Y~s~d~~G~~~~~~g~l~~P~~~--~~~~PvV~~~HG~~~~~~~~ps~~~~~~~~~~~~lal~~Gy~Vv~~ 116 (377)
T 4ezi_A 39 YDLQLYKINYKTQSPDGNLTIASGLVAMPIHP--VGQVGIISYQHGTRFERNDVPSRNNEKNYIYLAAYGNSAGYMTVMP 116 (377)
T ss_dssp CCEEEEEEEEEEECTTSCEEEEEEEEEEESSC--SSCEEEEEEECCCCCSTTCSGGGCCGGGHHHHHHHTTTTCCEEEEE
T ss_pred CCcEEEEEEEEEECCCCCEEEEEEEEEECCCC--CCCCcEEEEeCCCcCCcccCCCcCcccchHHHHHHHHhCCcEEEEe
Confidence 35567788888765 4 25577999999873 478999999999763211 1221 112233344 599999999
Q ss_pred eecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHH-cCCCCCCcEEEEeeChHHHHHHHHHHhCCC-----ceeEEEe
Q 003878 575 NIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLIS-AGYTQSRKLCIEGGSNGGLLVGACINQRPD-----LFGCALA 648 (789)
Q Consensus 575 ~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~-~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd-----~f~a~v~ 648 (789)
|+||.|+.+...+.-.........+.|.+.++..+.+ .+..++++|+++|+|+||.++++++.+.|+ .+.++++
T Consensus 117 D~rG~G~s~~~~~~~~~~~~~~~~~~D~~~a~~~~~~~~g~~~~~~v~l~G~S~GG~~al~~A~~~p~~~~~l~l~g~~~ 196 (377)
T 4ezi_A 117 DYLGLGDNELTLHPYVQAETLASSSIDMLFAAKELANRLHYPISDKLYLAGYSEGGFSTIVMFEMLAKEYPDLPVSAVAP 196 (377)
T ss_dssp CCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTSCCCEEEE
T ss_pred CCCCCCCCCCCCcccccchhHHHHHHHHHHHHHHHhhccCCCCCCceEEEEECHHHHHHHHHHHHhhhhCCCCceEEEEe
Confidence 9999887653111000000112234455555544444 365577999999999999999998887543 5889999
Q ss_pred cCCcccccccccccC---C---ccc-----------hhhcC------CCC------------------------------
Q 003878 649 HVGVMDMLRYHKFTI---G---HAW-----------VSDFG------CSE------------------------------ 675 (789)
Q Consensus 649 ~~p~~d~~~~~~~~~---~---~~~-----------~~e~g------~p~------------------------------ 675 (789)
..+..|+......-. . ..+ ..+|. ++.
T Consensus 197 ~~~p~dl~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~yp~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 276 (377)
T 4ezi_A 197 GSAPYGWEETMHFVMLEPGPRATAYLAYFFYSLQTYKSYWSGFDEIFAPPYNTLIPELMDGYHAVDEILQALPQDPLLIF 276 (377)
T ss_dssp ESCCCCHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHCCSSCHHHHBCTTHHHHHHHHTSSCSCHHHHHHHSCSSGGGGB
T ss_pred cCcccCHHHHHHHHhcCCCcccchhHHHHHHHHHHHHHhccCHHHHhCHHHHHHHHHHhhcccchhhhhhccCCCHHHHh
Confidence 988888653221000 0 000 00111 110
Q ss_pred ------------cHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCC
Q 003878 676 ------------EEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENS 743 (789)
Q Consensus 676 ------------~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~ 743 (789)
++...+.+.+.+.. .....+|+|++||.+|..||+.++.++++++++.
T Consensus 277 ~~~~~~~~~~~~~p~~~~~l~~~~~~------------~~~~~~Pvli~hG~~D~~Vp~~~~~~l~~~l~~~-------- 336 (377)
T 4ezi_A 277 QPKFSNGIISKTDRNTEILKINFNHY------------DFKPTAPLLLVGTKGDRDVPYAGAEMAYHSFRKY-------- 336 (377)
T ss_dssp CHHHHHHHHTTCSTTHHHHHHHHCCC------------CSCCSSCEEEEECTTCSSSCHHHHHHHHHHHHTT--------
T ss_pred chhhhhhcccccchHHHHHHHHhccc------------CCCCCCCEEEEecCCCCCCCHHHHHHHHHHHHhc--------
Confidence 00011111111111 1124689999999999999999999999999987
Q ss_pred CCCCcEEEEEeCC--CCcCCCCchhhHHHHHHHHHHHHHHHhCCC
Q 003878 744 PQTNPIIGRIERK--AGHGVGLPTQKMIDEAADRYGFMAKMLGAS 786 (789)
Q Consensus 744 ~~~~~~~l~~~~~--~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~ 786 (789)
|. ++++++++ .+|.... ......++.||.++++.+
T Consensus 337 --G~-v~~~~~~~~~~~H~~~~-----~~~~~~~~~wl~~~~~~~ 373 (377)
T 4ezi_A 337 --SD-FVWIKSVSDALDHVQAH-----PFVLKEQVDFFKQFERQE 373 (377)
T ss_dssp --CS-CEEEEESCSSCCTTTTH-----HHHHHHHHHHHHHHHTSS
T ss_pred --CC-EEEEEcCCCCCCccChH-----HHHHHHHHHHHHHhhcch
Confidence 88 99999999 8998642 356678999999998754
No 81
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=99.73 E-value=5.5e-17 Score=164.43 Aligned_cols=220 Identities=14% Similarity=0.001 Sum_probs=152.5
Q ss_pred ecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcc---
Q 003878 514 PSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG--- 590 (789)
Q Consensus 514 ~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~--- 590 (789)
...+| +++.++.|.+ +.|+||++||..+.... |.. ....|.++||.|+++|+||.|.....+....
T Consensus 8 ~~~~g---~~~~~~~~~~-----~~~~vv~~hG~~~~~~~--~~~-~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~~~~ 76 (238)
T 1ufo_A 8 LTLAG---LSVLARIPEA-----PKALLLALHGLQGSKEH--ILA-LLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPR 76 (238)
T ss_dssp EEETT---EEEEEEEESS-----CCEEEEEECCTTCCHHH--HHH-TSTTTGGGTEEEEECCCTTSTTSSCCCCCTTSTT
T ss_pred cccCC---EEEEEEecCC-----CccEEEEECCCcccchH--HHH-HHHHHHhCCCEEEEecCCCCccCCCCCCcccccc
Confidence 33466 4555666764 67999999998654321 221 2334555899999999999775432211100
Q ss_pred ----cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCcc
Q 003878 591 ----ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHA 666 (789)
Q Consensus 591 ----~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~ 666 (789)
....-....+|+.++++++.+.+. ++++++|+|+||.+++.++.++|++++++++..|...... ..
T Consensus 77 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~---~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~~~~~~-~~------ 146 (238)
T 1ufo_A 77 YVEEVYRVALGFKEEARRVAEEAERRFG---LPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMKL-PQ------ 146 (238)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCEEEEEETHHHHHHHHHHHTTCCCSCEEEESCCSSCCCC-CT------
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhccC---CcEEEEEEChHHHHHHHHHHhccCcceEEEEecCCccchh-hh------
Confidence 000012335788888999887754 7999999999999999999999999999888766432111 00
Q ss_pred chhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHH-HhhccCCCCCCC
Q 003878 667 WVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQ-YVLCTSLENSPQ 745 (789)
Q Consensus 667 ~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~-~~~~~~~~~~~~ 745 (789)
..+..|. ....+..+++...+... ..+|+|+++|++|..||+..+.++.+.++ ..
T Consensus 147 --~~~~~~~---~~~~~~~~~~~~~~~~~---------~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~~---------- 202 (238)
T 1ufo_A 147 --GQVVEDP---GVLALYQAPPATRGEAY---------GGVPLLHLHGSRDHIVPLARMEKTLEALRPHY---------- 202 (238)
T ss_dssp --TCCCCCH---HHHHHHHSCGGGCGGGG---------TTCCEEEEEETTCTTTTHHHHHHHHHHHGGGC----------
T ss_pred --hhccCCc---ccchhhcCChhhhhhhc---------cCCcEEEEECCCCCccCcHHHHHHHHHHhhcC----------
Confidence 0112222 24456677777666553 25799999999999999999999999998 65
Q ss_pred CC-cEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 746 TN-PIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 746 ~~-~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
+. .+++++++++||.+.. +....+.+||.++++
T Consensus 203 ~~~~~~~~~~~~~~H~~~~------~~~~~~~~~l~~~l~ 236 (238)
T 1ufo_A 203 PEGRLARFVEEGAGHTLTP------LMARVGLAFLEHWLE 236 (238)
T ss_dssp TTCCEEEEEETTCCSSCCH------HHHHHHHHHHHHHHH
T ss_pred CCCceEEEEeCCCCcccHH------HHHHHHHHHHHHHHh
Confidence 65 7899999999998742 345677889888775
No 82
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=99.73 E-value=4.7e-16 Score=162.94 Aligned_cols=237 Identities=12% Similarity=0.042 Sum_probs=158.7
Q ss_pred EEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhccc
Q 003878 512 FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGA 591 (789)
Q Consensus 512 ~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~ 591 (789)
.+...|| .+|.+.++.|++ ++.|+||++||..+... .|.. ....|.++||.|+++|+||.|...... ..
T Consensus 21 ~~~~~~g-~~l~~~~~~~~~----~~~~~vv~~hG~~~~~~--~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~~~---~~ 89 (303)
T 3pe6_A 21 HLVNADG-QYLFCRYWAPTG----TPKALIFVSHGAGEHSG--RYEE-LARMLMGLDLLVFAHDHVGHGQSEGER---MV 89 (303)
T ss_dssp EEECTTS-CEEEEEEECCSS----CCSEEEEEECCTTCCGG--GGHH-HHHHHHHTTEEEEEECCTTSTTSCSST---TC
T ss_pred eEecCCC-eEEEEEEeccCC----CCCeEEEEECCCCchhh--HHHH-HHHHHHhCCCcEEEeCCCCCCCCCCCC---CC
Confidence 5778899 999999988764 45799999999765443 4443 445555589999999999987654211 00
Q ss_pred ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc-----------
Q 003878 592 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK----------- 660 (789)
Q Consensus 592 ~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~----------- 660 (789)
...-....+|+.++++++... .+.++++++|+|+||.+++.++.++|++++++|+..|+........
T Consensus 90 ~~~~~~~~~d~~~~l~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 167 (303)
T 3pe6_A 90 VSDFHVFVRDVLQHVDSMQKD--YPGLPVFLLGHSMGGAIAILTAAERPGHFAGMVLISPLVLANPESATTFKVLAAKVL 167 (303)
T ss_dssp CSSTHHHHHHHHHHHHHHHHH--STTCCEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCSSSBCHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHhhc--cCCceEEEEEeCHHHHHHHHHHHhCcccccEEEEECccccCchhccHHHHHHHHHHH
Confidence 111223368888899988876 3456999999999999999999999999999999999876532110
Q ss_pred -----ccCCccchhhcCCCCcHHHHHHHHhcCcc----------------------cCCCCCCCCCCCCCCCCCeEEEEe
Q 003878 661 -----FTIGHAWVSDFGCSEEEEEFYWLIKYSPL----------------------HNVRRPWEQNPDKPFQYPSTLLLT 713 (789)
Q Consensus 661 -----~~~~~~~~~e~g~p~~~~~~~~l~~~sP~----------------------~~v~~~~~~~~~~~~~~pp~Li~~ 713 (789)
..........+.. .+......+.. .+. ..+.++ ..|+|+++
T Consensus 168 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----------~~P~l~i~ 235 (303)
T 3pe6_A 168 NSVLPNLSSGPIDSSVLS-RNKTEVDIYNS-DPLICRAGLKVCFGIQLLNAVSRVERALPKL----------TVPFLLLQ 235 (303)
T ss_dssp HTTCCSCCCCCCCGGGTC-SCHHHHHHHHT-CTTSCCSCCCHHHHHHHHHHHHHHHHHGGGC----------CSCEEEEE
T ss_pred HHhcccccCCccchhhhh-cchhHHHHhcc-CccccccchhhhhHHHHHHHHHHHHHHhhcC----------CCCEEEEe
Confidence 0000000000000 11111111111 111 122332 67999999
Q ss_pred cCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCch-hhHHHHHHHHHHHHHHHhCC
Q 003878 714 ADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT-QKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 714 g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~-~~~~~~~~~~~~fl~~~l~~ 785 (789)
|.+|..|++..+.++.+.+. +..+++.+++++||.+.... ....+....+++||.+++..
T Consensus 236 g~~D~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~gH~~~~~~p~~~~~~~~~~~~~l~~~~~~ 296 (303)
T 3pe6_A 236 GSADRLCDSKGAYLLMELAK------------SQDKTLKIYEGAYHVLHKELPEVTNSVFHEINMWVSQRTAT 296 (303)
T ss_dssp ETTCSSBCHHHHHHHHHHCC------------CSSEEEEEETTCCSCGGGSCHHHHHHHHHHHHHHHHHTTC-
T ss_pred eCCCCCCChHHHHHHHHhcc------------cCCceEEEeCCCccceeccchHHHHHHHHHHHHHHhccCCC
Confidence 99999999998888877664 22468999999999875433 22356677899999988753
No 83
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=99.72 E-value=5.5e-17 Score=170.75 Aligned_cols=213 Identities=17% Similarity=0.126 Sum_probs=137.0
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 615 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~ 615 (789)
+..+.||++||..++.. .|.. +...|+++||.|+++|+||.|......... ....-.+|+.+++++|.+.
T Consensus 49 G~~~~VlllHG~~~s~~--~~~~-la~~La~~Gy~Via~Dl~GhG~S~~~~~~~----~~~~~~~d~~~~~~~l~~~--- 118 (281)
T 4fbl_A 49 GSRIGVLVSHGFTGSPQ--SMRF-LAEGFARAGYTVATPRLTGHGTTPAEMAAS----TASDWTADIVAAMRWLEER--- 118 (281)
T ss_dssp CSSEEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEECCCTTSSSCHHHHHTC----CHHHHHHHHHHHHHHHHHH---
T ss_pred CCCceEEEECCCCCCHH--HHHH-HHHHHHHCCCEEEEECCCCCCCCCccccCC----CHHHHHHHHHHHHHHHHhC---
Confidence 45567889999655432 3443 455666699999999999988653322211 1112256788888888764
Q ss_pred CCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccc----ccc-C--------C----ccchhhcCCCCcH-
Q 003878 616 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH----KFT-I--------G----HAWVSDFGCSEEE- 677 (789)
Q Consensus 616 d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~----~~~-~--------~----~~~~~e~g~p~~~- 677 (789)
.++++++|+|+||.+++.++.++|++++++|+.+|.+.+.... .+. . . .....++..+..+
T Consensus 119 -~~~v~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (281)
T 4fbl_A 119 -CDVLFMTGLSMGGALTVWAAGQFPERFAGIMPINAALRMESPDLAALAFNPDAPAELPGIGSDIKAEGVKELAYPVTPV 197 (281)
T ss_dssp -CSEEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCSCCCCHHHHHHHTCTTCCSEEECCCCCCSSTTCCCCCCSEEEG
T ss_pred -CCeEEEEEECcchHHHHHHHHhCchhhhhhhcccchhcccchhhHHHHHhHhhHHhhhcchhhhhhHHHHHhhhccCch
Confidence 3689999999999999999999999999999998876543211 000 0 0 0000111111110
Q ss_pred HHHHHHHhcC--cccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeC
Q 003878 678 EEFYWLIKYS--PLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIER 755 (789)
Q Consensus 678 ~~~~~l~~~s--P~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~ 755 (789)
.....+.... .-..+.++ ..|+|+++|++|..||++++.++++++. +..+++++++
T Consensus 198 ~~~~~~~~~~~~~~~~l~~i----------~~P~Lii~G~~D~~v~~~~~~~l~~~l~------------~~~~~l~~~~ 255 (281)
T 4fbl_A 198 PAIKHLITIGAVAEMLLPRV----------KCPALIIQSREDHVVPPHNGELIYNGIG------------STEKELLWLE 255 (281)
T ss_dssp GGHHHHHHHHHHHHHHGGGC----------CSCEEEEEESSCSSSCTHHHHHHHHHCC------------CSSEEEEEES
T ss_pred HHHHHHHHhhhhcccccccc----------CCCEEEEEeCCCCCcCHHHHHHHHHhCC------------CCCcEEEEEC
Confidence 0001111100 00123333 6799999999999999999999888765 3467899999
Q ss_pred CCCcCCCCchhhHHHHHHHHHHHHHHH
Q 003878 756 KAGHGVGLPTQKMIDEAADRYGFMAKM 782 (789)
Q Consensus 756 ~~gH~~~~~~~~~~~~~~~~~~fl~~~ 782 (789)
++||....... ..+..+.+.+||++|
T Consensus 256 ~~gH~~~~e~~-~e~v~~~i~~FL~~H 281 (281)
T 4fbl_A 256 NSYHVATLDND-KELILERSLAFIRKH 281 (281)
T ss_dssp SCCSCGGGSTT-HHHHHHHHHHHHHTC
T ss_pred CCCCcCccccC-HHHHHHHHHHHHHhC
Confidence 99998654332 235567899999864
No 84
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=99.72 E-value=1.5e-16 Score=161.05 Aligned_cols=201 Identities=12% Similarity=0.059 Sum_probs=137.9
Q ss_pred EEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCC------ChhHHh-ccc---ccCC
Q 003878 526 IVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEY------GEEWHK-GGA---LAKK 595 (789)
Q Consensus 526 l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~------g~~~~~-~~~---~~~~ 595 (789)
++.|++ .++.|+||++||..+... .|. .....+.++||.|+++|.++.+.. ...|.+ .+. ....
T Consensus 14 ~~~p~~---~~~~~~vv~lHG~~~~~~--~~~-~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~w~d~~g~~~~~~~~ 87 (232)
T 1fj2_A 14 AIVPAA---RKATAAVIFLHGLGDTGH--GWA-EAFAGIRSSHIKYICPHAPVRPVTLNMNVAMPSWFDIIGLSPDSQED 87 (232)
T ss_dssp EEECCS---SCCSEEEEEECCSSSCHH--HHH-HHHHTTCCTTEEEEECCCCEEEEGGGTTEEEECSSCBCCCSTTCCBC
T ss_pred cccCCC---CCCCceEEEEecCCCccc--hHH-HHHHHHhcCCcEEEecCCCccccccccccccccccccccCCcccccc
Confidence 566765 357899999999875432 222 234455547999999855441100 000100 000 0011
Q ss_pred cc----hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhc
Q 003878 596 QN----CFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDF 671 (789)
Q Consensus 596 ~~----~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~ 671 (789)
.. ..+|+.++++++.+ ..+|+++++++|+|+||.+++.++.++|++++++|+.+|+.+......
T Consensus 88 ~~~~~~~~~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~----------- 155 (232)
T 1fj2_A 88 ESGIKQAAENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFP----------- 155 (232)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSSCCSEEEEESCCCTTGGGSC-----------
T ss_pred cHHHHHHHHHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCCceeEEEEeecCCCCCcccc-----------
Confidence 11 23566666666665 346889999999999999999999999999999999999765432110
Q ss_pred CCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCc--E
Q 003878 672 GCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNP--I 749 (789)
Q Consensus 672 g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~--~ 749 (789)
. ........ .+|+|+++|++|..|++.++.++++.+++. +.+ +
T Consensus 156 ---~------------~~~~~~~~----------~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~----------~~~~~~ 200 (232)
T 1fj2_A 156 ---Q------------GPIGGANR----------DISILQCHGDCDPLVPLMFGSLTVEKLKTL----------VNPANV 200 (232)
T ss_dssp ---S------------SCCCSTTT----------TCCEEEEEETTCSSSCHHHHHHHHHHHHHH----------SCGGGE
T ss_pred ---c------------cccccccC----------CCCEEEEecCCCccCCHHHHHHHHHHHHHh----------CCCCce
Confidence 0 01122232 689999999999999999999999999987 644 8
Q ss_pred EEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 750 IGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 750 ~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
++++++++||.+. .+....+.+||.++|+.
T Consensus 201 ~~~~~~~~~H~~~------~~~~~~i~~~l~~~l~~ 230 (232)
T 1fj2_A 201 TFKTYEGMMHSSC------QQEMMDVKQFIDKLLPP 230 (232)
T ss_dssp EEEEETTCCSSCC------HHHHHHHHHHHHHHSCC
T ss_pred EEEEeCCCCcccC------HHHHHHHHHHHHHhcCC
Confidence 9999999999982 23457899999998864
No 85
>1dqz_A 85C, protein (antigen 85-C); fibronectin, structural genomics, PSI, protein structure initiative, TB structural genomics consortium; 1.50A {Mycobacterium tuberculosis} SCOP: c.69.1.3 PDB: 3hrh_A 1dqy_A 1va5_A* 1f0n_A* 1f0p_A*
Probab=99.71 E-value=9.9e-17 Score=168.69 Aligned_cols=244 Identities=11% Similarity=0.022 Sum_probs=158.3
Q ss_pred cEEEEEEecC-CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHH--HHHHHHcCCeEEEEEeecCCCCCC
Q 003878 507 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVS--RTILMRHLGAVFCIANIRGGGEYG 583 (789)
Q Consensus 507 ~~~~~~~~s~-dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~--~~~~l~~~G~~v~~~~~RG~g~~g 583 (789)
..+.+.+.|. .| .+|++++ |++. + |+|+++||..+......|... ...++.++|++|+++|.+|++.|.
T Consensus 5 ~~~~~~~~s~~~~-~~~~v~~--~p~~---~--~~v~llHG~~~~~~~~~w~~~~~~~~~l~~~~~~vv~pd~~~~~~~~ 76 (280)
T 1dqz_A 5 PVEYLQVPSASMG-RDIKVQF--QGGG---P--HAVYLLDGLRAQDDYNGWDINTPAFEEYYQSGLSVIMPVGGQSSFYT 76 (280)
T ss_dssp CEEEEEEEETTTT-EEEEEEE--ECCS---S--SEEEECCCTTCCSSSCHHHHHSCHHHHHTTSSSEEEEECCCTTCTTS
T ss_pred eEEEEEEECcccC-ceeEEEE--cCCC---C--CEEEEECCCCCCCCcccccccCcHHHHHhcCCeEEEEECCCCCcccc
Confidence 3455666654 57 7887763 4332 1 589999998531112222211 234566689999999988654442
Q ss_pred hhHHhcccc--cCCcchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccc
Q 003878 584 EEWHKGGAL--AKKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH 659 (789)
Q Consensus 584 ~~~~~~~~~--~~~~~~~~D~~--~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~ 659 (789)
. |...... ......+.+++ +.+.++.++--+++++++|+|+|+||++++.++.++|++|+++|+.+|.++.....
T Consensus 77 ~-~~~~~~~~g~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~~l~G~S~GG~~al~~a~~~p~~~~~~v~~sg~~~~~~~~ 155 (280)
T 1dqz_A 77 D-WYQPSQSNGQNYTYKWETFLTREMPAWLQANKGVSPTGNAAVGLSMSGGSALILAAYYPQQFPYAASLSGFLNPSESW 155 (280)
T ss_dssp B-CSSSCTTTTCCSCCBHHHHHHTHHHHHHHHHHCCCSSSCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCCCTTSTT
T ss_pred C-CCCCCccccccccccHHHHHHHHHHHHHHHHcCCCCCceEEEEECHHHHHHHHHHHhCCchheEEEEecCcccccCcc
Confidence 1 1111000 00233455543 34444444223577899999999999999999999999999999999988764310
Q ss_pred -----c----ccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCC------------
Q 003878 660 -----K----FTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDD------------ 718 (789)
Q Consensus 660 -----~----~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~------------ 718 (789)
. ......+...||.|..+ .+.+.+|..++.+.- ...+|+++.||+.|.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~g~~~~~----~~~~~~p~~~~~~l~-------~~~~~~~l~~G~~D~~~~~~~~~~~~~ 224 (280)
T 1dqz_A 156 WPTLIGLAMNDSGGYNANSMWGPSSDP----AWKRNDPMVQIPRLV-------ANNTRIWVYCGNGTPSDLGGDNIPAKF 224 (280)
T ss_dssp HHHHHHHHHHHTTSCCHHHHHCSTTSH----HHHHTCTTTTHHHHH-------HHTCEEEEECCCSCCCTTCCCSHHHHH
T ss_pred hhhhHHHHhhhccCcCHHHhcCCCCch----hhhhcCHHHHHHHHH-------hcCCeEEEEeCCCCcccccccccchhh
Confidence 0 00011123446766432 235668876554310 014799999999997
Q ss_pred --CCCcHHHHHHHHHHHHhhccCCCCCCCC-CcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 719 --RVVPLHSLKLLATMQYVLCTSLENSPQT-NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 719 --~V~~~~~~~~~~~L~~~~~~~~~~~~~~-~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
.+++.++.+++++|++. | .++++.++++++|... .....+...+.||.+.||
T Consensus 225 ~e~~~~~~~~~~~~~L~~~----------g~~~~~~~~~~~g~H~~~----~w~~~l~~~l~~l~~~l~ 279 (280)
T 1dqz_A 225 LEGLTLRTNQTFRDTYAAD----------GGRNGVFNFPPNGTHSWP----YWNEQLVAMKADIQHVLN 279 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHT----------TCCSEEEECCSCCCSSHH----HHHHHHHHTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhC----------CCCceEEEecCCCccChH----HHHHHHHHHHHHHHHHhC
Confidence 57889999999999988 8 9999999999999752 124566788899988876
No 86
>3u0v_A Lysophospholipase-like protein 1; alpha, beta hydrolase fold, hydrolase; 1.72A {Homo sapiens}
Probab=99.70 E-value=1.8e-16 Score=161.72 Aligned_cols=195 Identities=10% Similarity=0.025 Sum_probs=135.2
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHc-----CCeEEEEEeecCC------CCCChhHHhcc-cc---cCCcchHH
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRH-----LGAVFCIANIRGG------GEYGEEWHKGG-AL---AKKQNCFD 600 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~-----~G~~v~~~~~RG~------g~~g~~~~~~~-~~---~~~~~~~~ 600 (789)
++.|+||++||..+.... |.. +...+.. .|+.|++++.++. +..+..|.... .. ......++
T Consensus 21 ~~~p~vv~lHG~g~~~~~--~~~-~~~~l~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 97 (239)
T 3u0v_A 21 RHSASLIFLHGSGDSGQG--LRM-WIKQVLNQDLTFQHIKIIYPTAPPRSYTPMKGGISNVWFDRFKITNDCPEHLESID 97 (239)
T ss_dssp CCCEEEEEECCTTCCHHH--HHH-HHHHHHTSCCCCSSEEEEEECCCEEECGGGTTCEEECSSCCSSSSSSSCCCHHHHH
T ss_pred CCCcEEEEEecCCCchhh--HHH-HHHHHhhcccCCCceEEEeCCCCccccccCCCCccccceeccCCCcccccchhhHH
Confidence 568999999997554222 222 2333333 3799999987532 33344454421 11 11123455
Q ss_pred HHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCCCCcH
Q 003878 601 DFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEE 677 (789)
Q Consensus 601 D~~~~~~~L~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~ 677 (789)
++.+.+..+++. ..+++++++++|+|+||.+++.++.++|+.++++|+.+|+.+....
T Consensus 98 ~~~~~l~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~~------------------- 158 (239)
T 3u0v_A 98 VMCQVLTDLIDEEVKSGIKKNRILIGGFSMGGCMAMHLAYRNHQDVAGVFALSSFLNKASA------------------- 158 (239)
T ss_dssp HHHHHHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHHHCTTSSEEEEESCCCCTTCH-------------------
T ss_pred HHHHHHHHHHHHHHHhCCCcccEEEEEEChhhHHHHHHHHhCccccceEEEecCCCCchhH-------------------
Confidence 555555555433 3368899999999999999999999999999999999987653111
Q ss_pred HHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCC
Q 003878 678 EEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKA 757 (789)
Q Consensus 678 ~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~ 757 (789)
.+..+. .... ..||+|++||++|..||++++.+++++|++. +.++++++++++
T Consensus 159 -~~~~~~------~~~~----------~~pp~li~~G~~D~~v~~~~~~~~~~~l~~~----------~~~~~~~~~~g~ 211 (239)
T 3u0v_A 159 -VYQALQ------KSNG----------VLPELFQCHGTADELVLHSWAEETNSMLKSL----------GVTTKFHSFPNV 211 (239)
T ss_dssp -HHHHHH------HCCS----------CCCCEEEEEETTCSSSCHHHHHHHHHHHHHT----------TCCEEEEEETTC
T ss_pred -HHHHHH------hhcc----------CCCCEEEEeeCCCCccCHHHHHHHHHHHHHc----------CCcEEEEEeCCC
Confidence 011111 1111 2467999999999999999999999999987 888999999999
Q ss_pred CcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 758 GHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 758 gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
||.+. .+....+.+||.+++..
T Consensus 212 ~H~~~------~~~~~~~~~~l~~~l~~ 233 (239)
T 3u0v_A 212 YHELS------KTELDILKLWILTKLPG 233 (239)
T ss_dssp CSSCC------HHHHHHHHHHHHHHCC-
T ss_pred CCcCC------HHHHHHHHHHHHHhCCC
Confidence 99986 24567888999998864
No 87
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=99.70 E-value=6.5e-16 Score=154.76 Aligned_cols=197 Identities=15% Similarity=0.120 Sum_probs=136.9
Q ss_pred EEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHc--CCeEEEEEeecC------CCCCChhHHhc-ccc---c
Q 003878 526 IVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH--LGAVFCIANIRG------GGEYGEEWHKG-GAL---A 593 (789)
Q Consensus 526 l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~RG------~g~~g~~~~~~-~~~---~ 593 (789)
++.|++ .++.|+||++||..+... .|. .....|.+ +||.|+++|.+| +|..+..|++. +.. .
T Consensus 5 ~~~~~~---~~~~~~vv~~HG~~~~~~--~~~-~~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~ 78 (218)
T 1auo_A 5 LILQPA---KPADACVIWLHGLGADRY--DFM-PVAEALQESLLTTRFVLPQAPTRPVTINGGYEMPSWYDIKAMSPARS 78 (218)
T ss_dssp EEECCS---SCCSEEEEEECCTTCCTT--TTH-HHHHHHHTTCTTEEEEECCCCEEEEGGGTTEEEECSSCEEECSSSCE
T ss_pred eecCCC---CCCCcEEEEEecCCCChh--hHH-HHHHHHhhcCCceEEEeCCCCCccccCCCCCcccceecCcCCCcccc
Confidence 344543 357899999999865433 233 34567776 899999998764 22222223221 111 1
Q ss_pred CCcchH----HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHH-hCCCceeEEEecCCcccccccccccCCccch
Q 003878 594 KKQNCF----DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACIN-QRPDLFGCALAHVGVMDMLRYHKFTIGHAWV 668 (789)
Q Consensus 594 ~~~~~~----~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~-~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~ 668 (789)
.....+ +|+.+.++++.+. .+++++++++|+|+||.+++.++. ++|++++++|+.+|..+.. .+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~---------~~~ 148 (218)
T 1auo_A 79 ISLEELEVSAKMVTDLIEAQKRT-GIDASRIFLAGFSQGGAVVFHTAFINWQGPLGGVIALSTYAPTF---------GDE 148 (218)
T ss_dssp ECHHHHHHHHHHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHTTCCSCCCEEEEESCCCTTC---------CTT
T ss_pred cchHHHHHHHHHHHHHHHHHHHc-CCCcccEEEEEECHHHHHHHHHHHhcCCCCccEEEEECCCCCCc---------hhh
Confidence 112223 4444455555543 368889999999999999999999 9999999999999977640 010
Q ss_pred hhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCc
Q 003878 669 SDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNP 748 (789)
Q Consensus 669 ~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 748 (789)
.++ . ... ..+|+|+++|++|..||++++.++++.++.. +.+
T Consensus 149 ~~~----~---------------~~~----------~~~P~l~i~G~~D~~~~~~~~~~~~~~l~~~----------g~~ 189 (218)
T 1auo_A 149 LEL----S---------------ASQ----------QRIPALCLHGQYDDVVQNAMGRSAFEHLKSR----------GVT 189 (218)
T ss_dssp CCC----C---------------HHH----------HTCCEEEEEETTCSSSCHHHHHHHHHHHHTT----------TCC
T ss_pred hhh----h---------------hcc----------cCCCEEEEEeCCCceecHHHHHHHHHHHHhC----------CCc
Confidence 000 0 011 2579999999999999999999999999987 778
Q ss_pred EEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 749 IIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 749 ~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
+++++++ +||.+.. +....+.+||.++|+
T Consensus 190 ~~~~~~~-~gH~~~~------~~~~~~~~~l~~~l~ 218 (218)
T 1auo_A 190 VTWQEYP-MGHEVLP------QEIHDIGAWLAARLG 218 (218)
T ss_dssp EEEEEES-CSSSCCH------HHHHHHHHHHHHHHC
T ss_pred eEEEEec-CCCccCH------HHHHHHHHHHHHHhC
Confidence 9999999 9998742 345678899988764
No 88
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=99.69 E-value=8e-16 Score=152.63 Aligned_cols=199 Identities=15% Similarity=0.083 Sum_probs=140.9
Q ss_pred EEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCH-HHHHHHHcCCeEEEEEeecCCCCCChhHH
Q 003878 509 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSV-SRTILMRHLGAVFCIANIRGGGEYGEEWH 587 (789)
Q Consensus 509 ~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~-~~~~~l~~~G~~v~~~~~RG~g~~g~~~~ 587 (789)
+...++ .|| .+|.++++.|.+ +.|+||++||+.+... .|.. .....+.++||.|+.+|+||.|... .
T Consensus 5 ~~~~~~-~~g-~~l~~~~~~~~~-----~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~---~ 72 (207)
T 3bdi_A 5 QEEFID-VNG-TRVFQRKMVTDS-----NRRSIALFHGYSFTSM--DWDKADLFNNYSKIGYNVYAPDYPGFGRSA---S 72 (207)
T ss_dssp EEEEEE-ETT-EEEEEEEECCTT-----CCEEEEEECCTTCCGG--GGGGGTHHHHHHTTTEEEEEECCTTSTTSC---C
T ss_pred eeEEEe-eCC-cEEEEEEEeccC-----CCCeEEEECCCCCCcc--ccchHHHHHHHHhCCCeEEEEcCCcccccC---c
Confidence 333343 488 999999998875 5689999999876543 3333 1445666699999999999876531 0
Q ss_pred hcccccCCcc-hHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCcc
Q 003878 588 KGGALAKKQN-CFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHA 666 (789)
Q Consensus 588 ~~~~~~~~~~-~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~ 666 (789)
.. ...... .++|+.+.+..+++. .+.++++++|+|+||.+++.++.++|++++++|+..|.... .
T Consensus 73 ~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~-~--------- 138 (207)
T 3bdi_A 73 SE--KYGIDRGDLKHAAEFIRDYLKA--NGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVE-S--------- 138 (207)
T ss_dssp CT--TTCCTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCG-G---------
T ss_pred cc--CCCCCcchHHHHHHHHHHHHHH--cCCCceEEEEECccHHHHHHHHHhCchhheEEEEeCCcccc-c---------
Confidence 00 011122 678888888888776 35579999999999999999999999999999998886211 0
Q ss_pred chhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCC
Q 003878 667 WVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT 746 (789)
Q Consensus 667 ~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~ 746 (789)
+ . ..+.+. ..|+|+++|.+|..+++..+.++.+.+.
T Consensus 139 ----~--------~---------~~~~~~----------~~p~l~i~g~~D~~~~~~~~~~~~~~~~------------- 174 (207)
T 3bdi_A 139 ----L--------K---------GDMKKI----------RQKTLLVWGSKDHVVPIALSKEYASIIS------------- 174 (207)
T ss_dssp ----G--------H---------HHHTTC----------CSCEEEEEETTCTTTTHHHHHHHHHHST-------------
T ss_pred ----h--------h---------HHHhhc----------cCCEEEEEECCCCccchHHHHHHHHhcC-------------
Confidence 0 0 111222 4799999999999999998888776653
Q ss_pred CcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 747 NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 747 ~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
.+++.+++++||.+..... .+....+.+||.
T Consensus 175 -~~~~~~~~~~~H~~~~~~~--~~~~~~i~~fl~ 205 (207)
T 3bdi_A 175 -GSRLEIVEGSGHPVYIEKP--EEFVRITVDFLR 205 (207)
T ss_dssp -TCEEEEETTCCSCHHHHSH--HHHHHHHHHHHH
T ss_pred -CceEEEeCCCCCCccccCH--HHHHHHHHHHHh
Confidence 2378999999998643222 345556777775
No 89
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=99.69 E-value=3e-16 Score=161.58 Aligned_cols=184 Identities=13% Similarity=0.103 Sum_probs=133.5
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEE--eecCCCCCChhHHhccc-ccCC----cchHHHHHHHHHH
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIA--NIRGGGEYGEEWHKGGA-LAKK----QNCFDDFISASEY 608 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~--~~RG~g~~g~~~~~~~~-~~~~----~~~~~D~~~~~~~ 608 (789)
++.|+||++||+.+... .|. .....|+ .+|.|+++ +.||.|++ .|..... .... ....+|+.+++++
T Consensus 60 ~~~p~vv~~HG~~~~~~--~~~-~~~~~l~-~~~~v~~~~~d~~g~g~s--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 133 (251)
T 2r8b_A 60 AGAPLFVLLHGTGGDEN--QFF-DFGARLL-PQATILSPVGDVSEHGAA--RFFRRTGEGVYDMVDLERATGKMADFIKA 133 (251)
T ss_dssp TTSCEEEEECCTTCCHH--HHH-HHHHHHS-TTSEEEEECCSEEETTEE--ESSCBCGGGCBCHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCCHh--HHH-HHHHhcC-CCceEEEecCCcCCCCCc--ccccCCCCCcCCHHHHHHHHHHHHHHHHH
Confidence 56799999999775432 232 2345566 57999999 78887643 2221110 1111 1235778888888
Q ss_pred HHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCc
Q 003878 609 LISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSP 688 (789)
Q Consensus 609 L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP 688 (789)
+.++. +.++++++|+|+||.+++.++.++|++++++|+..|+.+... .+
T Consensus 134 ~~~~~--~~~~i~l~G~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~-----------------------------~~ 182 (251)
T 2r8b_A 134 NREHY--QAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIPFEP-----------------------------KI 182 (251)
T ss_dssp HHHHH--TCCSEEEEEETHHHHHHHHHHHHSTTTCSEEEEESCCCCSCC-----------------------------CC
T ss_pred HHhcc--CCCcEEEEEECHHHHHHHHHHHhCCcccCeEEEEecCCCccc-----------------------------cc
Confidence 87763 778999999999999999999999999999999999765321 00
Q ss_pred ccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhH
Q 003878 689 LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKM 768 (789)
Q Consensus 689 ~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~ 768 (789)
.... ..+|+|+++|++|..|++.++.+++++|++. +.++++ +++++||.+.
T Consensus 183 --~~~~----------~~~P~li~~g~~D~~~~~~~~~~~~~~l~~~----------~~~~~~-~~~~~gH~~~------ 233 (251)
T 2r8b_A 183 --SPAK----------PTRRVLITAGERDPICPVQLTKALEESLKAQ----------GGTVET-VWHPGGHEIR------ 233 (251)
T ss_dssp --CCCC----------TTCEEEEEEETTCTTSCHHHHHHHHHHHHHH----------SSEEEE-EEESSCSSCC------
T ss_pred --cccc----------cCCcEEEeccCCCccCCHHHHHHHHHHHHHc----------CCeEEE-EecCCCCccC------
Confidence 1111 2579999999999999999999999999987 777777 5567899983
Q ss_pred HHHHHHHHHHHHHHhCC
Q 003878 769 IDEAADRYGFMAKMLGA 785 (789)
Q Consensus 769 ~~~~~~~~~fl~~~l~~ 785 (789)
.+....+.+||.++|+.
T Consensus 234 ~~~~~~~~~~l~~~l~~ 250 (251)
T 2r8b_A 234 SGEIDAVRGFLAAYGGG 250 (251)
T ss_dssp HHHHHHHHHHHGGGC--
T ss_pred HHHHHHHHHHHHHhcCC
Confidence 23456788999998875
No 90
>3b5e_A MLL8374 protein; NP_108484.1, carboxylesterase, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; 1.75A {Mesorhizobium loti} SCOP: c.69.1.14
Probab=99.69 E-value=2.5e-16 Score=159.00 Aligned_cols=197 Identities=17% Similarity=0.120 Sum_probs=138.7
Q ss_pred eEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhccccc-CC---
Q 003878 520 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA-KK--- 595 (789)
Q Consensus 520 ~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~-~~--- 595 (789)
..+...++.|.+ .+.|+||++||..+... .|.. +...+. .|+.|+++|.++....|..|....... ..
T Consensus 16 ~~l~~~~~~~~~----~~~p~vv~lHG~g~~~~--~~~~-~~~~l~-~~~~vv~~d~~~~~~~g~~~~~~~~~~~~~~~~ 87 (223)
T 3b5e_A 16 LAFPYRLLGAGK----ESRECLFLLHGSGVDET--TLVP-LARRIA-PTATLVAARGRIPQEDGFRWFERIDPTRFEQKS 87 (223)
T ss_dssp SSSCEEEESTTS----SCCCEEEEECCTTBCTT--TTHH-HHHHHC-TTSEEEEECCSEEETTEEESSCEEETTEECHHH
T ss_pred CCceEEEeCCCC----CCCCEEEEEecCCCCHH--HHHH-HHHhcC-CCceEEEeCCCCCcCCccccccccCCCcccHHH
Confidence 455555544432 23499999999765433 3433 455666 599999999776322244554321110 11
Q ss_pred -cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCCC
Q 003878 596 -QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCS 674 (789)
Q Consensus 596 -~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p 674 (789)
....+|+.+.++++.++..+++++++++|+|+||.+++.++.++|++++++|+.+|...... +
T Consensus 88 ~~~~~~~~~~~i~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~----------------~ 151 (223)
T 3b5e_A 88 ILAETAAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLDH----------------V 151 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCGGGEEEEEETHHHHHHHHHHHHSTTSCSEEEEESCCCCCSS----------------C
T ss_pred HHHHHHHHHHHHHHHHHHhCCCCCcEEEEEECcHHHHHHHHHHhCccccceEEEecCccCccc----------------c
Confidence 12345667777777766446889999999999999999999999999999999988654210 0
Q ss_pred CcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEe
Q 003878 675 EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIE 754 (789)
Q Consensus 675 ~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~ 754 (789)
+ .... ..+|+|+++|++|..||+.++. +++.|+.. |.+++++++
T Consensus 152 -------------~--~~~~----------~~~P~li~~G~~D~~v~~~~~~-~~~~l~~~----------g~~~~~~~~ 195 (223)
T 3b5e_A 152 -------------P--ATDL----------AGIRTLIIAGAADETYGPFVPA-LVTLLSRH----------GAEVDARII 195 (223)
T ss_dssp -------------C--CCCC----------TTCEEEEEEETTCTTTGGGHHH-HHHHHHHT----------TCEEEEEEE
T ss_pred -------------c--cccc----------cCCCEEEEeCCCCCcCCHHHHH-HHHHHHHC----------CCceEEEEe
Confidence 0 1111 2579999999999999999999 99999987 888999999
Q ss_pred CCCCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 755 RKAGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 755 ~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
+ +||.+.. +....+.+||.+.+
T Consensus 196 ~-~gH~~~~------~~~~~i~~~l~~~~ 217 (223)
T 3b5e_A 196 P-SGHDIGD------PDAAIVRQWLAGPI 217 (223)
T ss_dssp S-CCSCCCH------HHHHHHHHHHHCC-
T ss_pred c-CCCCcCH------HHHHHHHHHHHhhh
Confidence 9 9999842 23457888887654
No 91
>2qru_A Uncharacterized protein; alpha/beta-hydrolase, structural GENO PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 1.65A {Enterococcus faecalis}
Probab=99.68 E-value=3.4e-16 Score=164.03 Aligned_cols=230 Identities=12% Similarity=0.011 Sum_probs=142.2
Q ss_pred EecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCC-CCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhccc
Q 003878 513 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-SFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGA 591 (789)
Q Consensus 513 ~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~ 591 (789)
++..+| . ++.++.|++ ++.|+|||+|||.....+. .+......++.+.|+.|+.+|||+.++.
T Consensus 9 ~~~~~~-~--~~~~y~p~~----~~~p~iv~~HGGg~~~g~~~~~~~~~~~~l~~~g~~Vi~vdYrlaPe~--------- 72 (274)
T 2qru_A 9 QTLANG-A--TVTIYPTTT----EPTNYVVYLHGGGMIYGTKSDLPEELKELFTSNGYTVLALDYLLAPNT--------- 72 (274)
T ss_dssp EECTTS-C--EEEEECCSS----SSCEEEEEECCSTTTSCCGGGCCHHHHHHHHTTTEEEEEECCCCTTTS---------
T ss_pred ccccCC-e--eEEEEcCCC----CCCcEEEEEeCccccCCChhhchHHHHHHHHHCCCEEEEeCCCCCCCC---------
Confidence 344567 4 456677764 4679999999987443332 2333445667768999999999987653
Q ss_pred ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHH---hCCCceeEEEecCCcccccccccc---cC--
Q 003878 592 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACIN---QRPDLFGCALAHVGVMDMLRYHKF---TI-- 663 (789)
Q Consensus 592 ~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~---~~pd~f~a~v~~~p~~d~~~~~~~---~~-- 663 (789)
..+..++|+.++++||.++.. +++||+|+|+|+||.+++.++. ..|...+++|...|+.|....... ..
T Consensus 73 --~~p~~~~D~~~al~~l~~~~~-~~~~i~l~G~SaGG~lA~~~a~~~~~~~~~~~~~vl~~~~~~~~~~~~~~~~~~~~ 149 (274)
T 2qru_A 73 --KIDHILRTLTETFQLLNEEII-QNQSFGLCGRSAGGYLMLQLTKQLQTLNLTPQFLVNFYGYTDLEFIKEPRKLLKQA 149 (274)
T ss_dssp --CHHHHHHHHHHHHHHHHHHTT-TTCCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCSCSGGGGSCCCSCSSC
T ss_pred --CCcHHHHHHHHHHHHHHhccc-cCCcEEEEEECHHHHHHHHHHHHHhcCCCCceEEEEEcccccccccCCchhhcccc
Confidence 123458999999999998743 3789999999999999999887 357788899988887772111000 00
Q ss_pred -Cccchhhc-C-CC------C-cHHH---------HHHHHhcCcc-----cCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 003878 664 -GHAWVSDF-G-CS------E-EEEE---------FYWLIKYSPL-----HNVRRPWEQNPDKPFQYPSTLLLTADHDDR 719 (789)
Q Consensus 664 -~~~~~~e~-g-~p------~-~~~~---------~~~l~~~sP~-----~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~ 719 (789)
...+...+ . .+ . .... +..+...... ..+... .-...||+||++|+.|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~l~~lpP~li~~G~~D~~ 223 (274)
T 2qru_A 150 ISAKEIAAIDQTKPVWDDPFLSRYLLYHYSIQQALLPHFYGLPENGDWSAYALSDE------TLKTFPPCFSTASSSDEE 223 (274)
T ss_dssp CCSGGGTTSCCSSCCSCCTTCTTHHHHHHHHHTTCHHHHHTCCTTSCCGGGCCCHH------HHHTSCCEEEEEETTCSS
T ss_pred ccHHHHhhhcccCCCCCCccccchhhhhhhhhhcchhhccCcccccccccCCCChh------hhcCCCCEEEEEecCCCC
Confidence 00000000 0 00 0 0000 0000000000 001100 001248999999999999
Q ss_pred CCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCc--hhhHHHHHHHHHHHHHH
Q 003878 720 VVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLP--TQKMIDEAADRYGFMAK 781 (789)
Q Consensus 720 V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~--~~~~~~~~~~~~~fl~~ 781 (789)
++..++.++.+++. .++++++++++|++... .....+..+.+.+||.+
T Consensus 224 ~~~~~~~~l~~~~~--------------~~~l~~~~g~~H~~~~~~~~~~~~~~~~~~~~fl~~ 273 (274)
T 2qru_A 224 VPFRYSKKIGRTIP--------------ESTFKAVYYLEHDFLKQTKDPSVITLFEQLDSWLKE 273 (274)
T ss_dssp SCTHHHHHHHHHST--------------TCEEEEECSCCSCGGGGTTSHHHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHhCC--------------CcEEEEcCCCCcCCccCcCCHHHHHHHHHHHHHHhh
Confidence 99888777766543 45899999999997432 12223556778888864
No 92
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=99.68 E-value=3.9e-16 Score=159.16 Aligned_cols=216 Identities=11% Similarity=0.051 Sum_probs=142.5
Q ss_pred CCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCC-ChhHHhcccccCCcchHHHHHHHHHHHHHcC
Q 003878 535 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEY-GEEWHKGGALAKKQNCFDDFISASEYLISAG 613 (789)
Q Consensus 535 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~-g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~ 613 (789)
.++.|+||++||..+... .|.. ....|.++||.|+++|+||.|.. +...... .......+|+.+++++|...
T Consensus 19 ~~~~~~vv~~HG~~~~~~--~~~~-~~~~l~~~G~~v~~~d~~g~g~s~~~~~~~~---~~~~~~~~d~~~~i~~l~~~- 91 (251)
T 3dkr_A 19 EGTDTGVVLLHAYTGSPN--DMNF-MARALQRSGYGVYVPLFSGHGTVEPLDILTK---GNPDIWWAESSAAVAHMTAK- 91 (251)
T ss_dssp CCSSEEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEECCCTTCSSSCTHHHHHH---CCHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCceEEEeCCCCCCHH--HHHH-HHHHHHHCCCEEEecCCCCCCCCChhhhcCc---ccHHHHHHHHHHHHHHHHHh-
Confidence 346689999999766543 3433 44556568999999999998866 3322211 01122257888888888876
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCC---ccchhhcCCCCcHH--------HHHH
Q 003878 614 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG---HAWVSDFGCSEEEE--------EFYW 682 (789)
Q Consensus 614 ~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~---~~~~~e~g~p~~~~--------~~~~ 682 (789)
.++++++|+|+||.+++.++.++|++++++|+..|+............ ..+....+...... ....
T Consensus 92 ---~~~~~l~G~S~Gg~~a~~~a~~~p~~~~~~i~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (251)
T 3dkr_A 92 ---YAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSPILPGKHHLVPGFLKYAEYMNRLAGKSDESTQILAYLPGQLAA 168 (251)
T ss_dssp ---CSEEEEEESHHHHHHHHHHHHHCSSCCEEEESSCCCCTTCBCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHHH
T ss_pred ---cCCeEEEEechHHHHHHHHHHhCccceeeEEEecchhhccchhhHHHHHHHHHHHhhcccCcchhhHHhhhHHHHHH
Confidence 579999999999999999999999999999999998764321100000 00000111110100 0111
Q ss_pred HHhc--CcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcC
Q 003878 683 LIKY--SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHG 760 (789)
Q Consensus 683 l~~~--sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~ 760 (789)
+... .+...+.+. .+|+|+++|.+|..+++..+.++++++.. ..++++.+++++||.
T Consensus 169 ~~~~~~~~~~~~~~~----------~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~gH~ 227 (251)
T 3dkr_A 169 IDQFATTVAADLNLV----------KQPTFIGQAGQDELVDGRLAYQLRDALIN-----------AARVDFHWYDDAKHV 227 (251)
T ss_dssp HHHHHHHHHHTGGGC----------CSCEEEEEETTCSSBCTTHHHHHHHHCTT-----------CSCEEEEEETTCCSC
T ss_pred HHHHHHHHhcccccc----------CCCEEEEecCCCcccChHHHHHHHHHhcC-----------CCCceEEEeCCCCcc
Confidence 1111 112334443 68999999999999999999998887763 046789999999999
Q ss_pred CCCchhhHHHHHHHHHHHHHHH
Q 003878 761 VGLPTQKMIDEAADRYGFMAKM 782 (789)
Q Consensus 761 ~~~~~~~~~~~~~~~~~fl~~~ 782 (789)
...... ..+....+.+||.+.
T Consensus 228 ~~~~~~-~~~~~~~i~~fl~~~ 248 (251)
T 3dkr_A 228 ITVNSA-HHALEEDVIAFMQQE 248 (251)
T ss_dssp TTTSTT-HHHHHHHHHHHHHTT
T ss_pred cccccc-hhHHHHHHHHHHHhh
Confidence 865532 246777889999764
No 93
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.67 E-value=1.3e-14 Score=158.85 Aligned_cols=262 Identities=13% Similarity=0.042 Sum_probs=166.8
Q ss_pred EEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEE
Q 003878 137 VSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFY 216 (789)
Q Consensus 137 ~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 216 (789)
++|||||++|||+.+..| ..+|+++|+++|+..+.. ... ..
T Consensus 41 ~~~SpDg~~l~~~~~~~g--~~~l~~~d~~~g~~~~lt--~~~---------------------~~-------------- 81 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDG--PWNYYLLDLNTQVATQLT--EGR---------------------GD-------------- 81 (388)
T ss_dssp CCBCTTSCEEEEEECTTS--SCEEEEEETTTCEEEECC--CSS---------------------CB--------------
T ss_pred ccCCCCCCEEEEEEcCCC--CceEEEEeCCCCceEEee--eCC---------------------CC--------------
Confidence 789999999999987555 468999999999765422 110 00
Q ss_pred EeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecC
Q 003878 217 LFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDP 296 (789)
Q Consensus 217 ~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~ 296 (789)
....++|||||+.|+|...+ ..|+++++.++.. ..++..+
T Consensus 82 -------------------~~~~~~~spdg~~l~~~~~~-------------------~~l~~~d~~~g~~--~~~~~~~ 121 (388)
T 3pe7_A 82 -------------------NTFGGFLSPDDDALFYVKDG-------------------RNLMRVDLATLEE--NVVYQVP 121 (388)
T ss_dssp -------------------CSSSCEECTTSSEEEEEETT-------------------TEEEEEETTTCCE--EEEEECC
T ss_pred -------------------CccceEEcCCCCEEEEEeCC-------------------CeEEEEECCCCcc--eeeeech
Confidence 12367899999999998632 3699999987643 3455554
Q ss_pred CCCeeEEEEEEecCCcEEEEEEEcC-----------------CCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc
Q 003878 297 EHPKYIFSGHVTEDGQYLVMCIEEN-----------------CDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF 359 (789)
Q Consensus 297 ~~~~~~~~~~~SpDG~~l~~~~~~~-----------------~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~ 359 (789)
...........+|||+.++...... ......||++|++++. ...+....
T Consensus 122 ~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~--------------~~~l~~~~ 187 (388)
T 3pe7_A 122 AEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGE--------------STVILQEN 187 (388)
T ss_dssp TTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCC--------------EEEEEEES
T ss_pred hhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCc--------------eEEeecCC
Confidence 3211112234599999987644221 1124789999998853 22333221
Q ss_pred -cceeEEEec-CCCEEEEEECCC--CCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCeE--EE
Q 003878 360 -DAQYEVIAN-DDTVFTFLTNKD--APKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKY--VL 432 (789)
Q Consensus 360 -~~~~~~~s~-dG~~l~~~tn~~--~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~~--~L 432 (789)
......|+| ||+.|++..+.. ....+|+.++++++. .+.+........+..+.|++++ .|++....++.. .|
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 266 (388)
T 3pe7_A 188 QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN-MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFI 266 (388)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC-CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEE
T ss_pred ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc-eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceE
Confidence 123456999 999999888742 125689999998765 5666654432356678899864 476666665544 59
Q ss_pred EEEECCCCceeeecc-cCCe-eE----EEeecccCCcEEEEEEcC-----CCCCcEEEEEECCCCCceEEEeee
Q 003878 433 QIRDLKNGSLLHQLP-IEIG-SV----NAISARREDSVVFISFTS-----FLIPGIVYQCNLKTETPEMKIFRE 495 (789)
Q Consensus 433 ~~~dl~tG~~~~~l~-~~~~-~v----~~~s~s~d~~~l~~~~ss-----~~~P~~ly~~dl~tg~~~~~~l~~ 495 (789)
++||+++|+. +.+. .+.. .. ....++||++.++++... ......||++|+.+++ .+.+..
T Consensus 267 ~~~d~~~g~~-~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~l~~ 337 (388)
T 3pe7_A 267 YSADPETLEN-RQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGT--QHRVAR 337 (388)
T ss_dssp EEECTTTCCE-EEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTE--EEEEEE
T ss_pred EEEecCCCce-EEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCc--eEEecc
Confidence 9999998875 3432 2210 11 112478899888876532 2456799999999884 555654
No 94
>3cn9_A Carboxylesterase; alpha/beta hydrolase fold super-family, hydrolase; HET: 2PE; 2.09A {Pseudomonas aeruginosa} PDB: 3cn7_A*
Probab=99.67 E-value=1e-15 Score=154.95 Aligned_cols=190 Identities=16% Similarity=0.123 Sum_probs=132.9
Q ss_pred CCCCccEEEEEcCCCCccCCCCCCHHHHHHHHc--CCeEEEEEeecCC------CCCChhHHhc-ccc---cCCcchHHH
Q 003878 534 LDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH--LGAVFCIANIRGG------GEYGEEWHKG-GAL---AKKQNCFDD 601 (789)
Q Consensus 534 ~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~--~G~~v~~~~~RG~------g~~g~~~~~~-~~~---~~~~~~~~D 601 (789)
.+++.|+||++||..+... .|.. ....+.+ +||.|+++|.+|. |..+..|.+. +.. ......+++
T Consensus 20 ~~~~~~~vv~lHG~~~~~~--~~~~-~~~~l~~~~~g~~v~~~d~p~~~~~~~~g~~~~~w~d~~g~g~~~~~~~~~~~~ 96 (226)
T 3cn9_A 20 APNADACIIWLHGLGADRT--DFKP-VAEALQMVLPSTRFILPQAPSQAVTVNGGWVMPSWYDILAFSPARAIDEDQLNA 96 (226)
T ss_dssp CTTCCEEEEEECCTTCCGG--GGHH-HHHHHHHHCTTEEEEECCCCEEECGGGTSCEEECSSCBCCSSSTTCBCHHHHHH
T ss_pred CCCCCCEEEEEecCCCChH--HHHH-HHHHHhhcCCCcEEEeecCCCCccccCCCCccccccccccccccccccchhHHH
Confidence 3567899999999875533 2333 4455665 8999999988842 2112223221 111 111223444
Q ss_pred HH----HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHH-hCCCceeEEEecCCcccccccccccCCccchhhcCCCCc
Q 003878 602 FI----SASEYLISAGYTQSRKLCIEGGSNGGLLVGACIN-QRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEE 676 (789)
Q Consensus 602 ~~----~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~-~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~ 676 (789)
.. +.++.+.+. .+++++|+++|+|+||.+++.++. ++|++++++|+.+|+.+.....
T Consensus 97 ~~~~~~~~~~~~~~~-~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~v~~~~~~~~~~~~----------------- 158 (226)
T 3cn9_A 97 SADQVIALIDEQRAK-GIAAERIILAGFSQGGAVVLHTAFRRYAQPLGGVLALSTYAPTFDDL----------------- 158 (226)
T ss_dssp HHHHHHHHHHHHHHT-TCCGGGEEEEEETHHHHHHHHHHHHTCSSCCSEEEEESCCCGGGGGC-----------------
T ss_pred HHHHHHHHHHHHHHc-CCCcccEEEEEECHHHHHHHHHHHhcCccCcceEEEecCcCCCchhh-----------------
Confidence 44 444444442 367889999999999999999999 9999999999999976542111
Q ss_pred HHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCC
Q 003878 677 EEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERK 756 (789)
Q Consensus 677 ~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~ 756 (789)
.+.+ .. ..+|+|+++|++|..||++++.++++.++.. +.++++++++
T Consensus 159 --------~~~~----~~----------~~~P~lii~G~~D~~~~~~~~~~~~~~l~~~----------g~~~~~~~~~- 205 (226)
T 3cn9_A 159 --------ALDE----RH----------KRIPVLHLHGSQDDVVDPALGRAAHDALQAQ----------GVEVGWHDYP- 205 (226)
T ss_dssp --------CCCT----GG----------GGCCEEEEEETTCSSSCHHHHHHHHHHHHHT----------TCCEEEEEES-
T ss_pred --------hhcc----cc----------cCCCEEEEecCCCCccCHHHHHHHHHHHHHc----------CCceeEEEec-
Confidence 0011 12 2579999999999999999999999999987 7789999999
Q ss_pred CCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 757 AGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 757 ~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
+||.+.. +....+.+||.++|
T Consensus 206 ~gH~~~~------~~~~~i~~~l~~~l 226 (226)
T 3cn9_A 206 MGHEVSL------EEIHDIGAWLRKRL 226 (226)
T ss_dssp CCSSCCH------HHHHHHHHHHHHHC
T ss_pred CCCCcch------hhHHHHHHHHHhhC
Confidence 9998732 34567889998764
No 95
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.67 E-value=2.9e-14 Score=177.52 Aligned_cols=340 Identities=9% Similarity=0.046 Sum_probs=206.0
Q ss_pred CCCCceEeCCEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecC-CceEEEE
Q 003878 82 RYDAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYS-GSDWATI 160 (789)
Q Consensus 82 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~-g~~~~~i 160 (789)
.+..|...|++++|... ..||+.+..+++.+.|... ...+..++|||||++|||+.... .....+|
T Consensus 16 ~~~~~~~S~~~iaf~~~------~~l~~~~~~gg~~~~lt~~-------~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i 82 (1045)
T 1k32_A 16 LLLNPDIHGDRIIFVCC------DDLWEHDLKSGSTRKIVSN-------LGVINNARFFPDGRKIAIRVMRGSSLNTADL 82 (1045)
T ss_dssp CCEEEEEETTEEEEEET------TEEEEEETTTCCEEEEECS-------SSEEEEEEECTTSSEEEEEEEESTTCCEEEE
T ss_pred eEeCcEEeCCEEEEEEC------CcEEEEECCCCcEEEeeeC-------CCcccCeEECCCCCEEEEEEeeccCCCCCeE
Confidence 34455556888888664 2488887666666666542 23578899999999999987651 1225799
Q ss_pred EEEEcCCCceecccccc----------cccccccCccceeeeeec--------ccc--ccccccc---------------
Q 003878 161 KLMRIEDQIVEADALSW----------VCFCFSHSFGYFFHLTIS--------LLN--VPTYKLF--------------- 205 (789)
Q Consensus 161 ~v~dl~tg~~~~~~~~~----------~~~~~~~~~~~~~~~~~~--------~~~--~p~~~~~--------------- 205 (789)
++||+++|+....+... ....|++....++.-... .+. ...++..
T Consensus 83 ~~~d~~~g~~~~lt~~~~~~~~~~~~~~~~~~SpDg~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~spG 162 (1045)
T 1k32_A 83 YFYNGENGEIKRITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPATHILFADG 162 (1045)
T ss_dssp EEEETTTTEEEECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSCSEEEEETT
T ss_pred EEEECCCCCeEEcccCCCcccccccccccccCCCCCEEEEEECCcCCCcccceEEEEECCCCCeEEecCCCcceeeeCCC
Confidence 99999998643211100 011222222211111000 000 0000000
Q ss_pred ------------------------ccc--c---------------cce--eeEEEeeeccccceeeeeeec------cc-
Q 003878 206 ------------------------LYL--R---------------GIF--FFFYLFSLVKSTIYSFWSVVS------QF- 235 (789)
Q Consensus 206 ------------------------~~~--~---------------~~~--~~~~~~~s~~~g~~~l~~~~~------~~- 235 (789)
+|+ . ... --+++|+++++|..+||.++. .+
T Consensus 163 ~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d~l~~~~~~dg~~~l~~~~~~g~~~~~l~ 242 (1045)
T 1k32_A 163 RRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGHRIYFITDIDGFGQIYSTDLDGKDLRKHT 242 (1045)
T ss_dssp EEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETTEEEEEECTTSSCEEEEEETTSCSCEECC
T ss_pred EEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCCEEEEEEeccCceEEEEEeCCCCcceEec
Confidence 000 0 000 014678888889999998875 11
Q ss_pred ---ccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCC---------CCeeEE
Q 003878 236 ---KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPE---------HPKYIF 303 (789)
Q Consensus 236 ---~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~---------~~~~~~ 303 (789)
....++|||||+.|+|... ..|+++++.+. .+....... +...+.
T Consensus 243 ~~~~~~~~~~SpDG~~la~~~~--------------------~~i~~~d~~~~---~l~~l~~~~~~~~~~~~~~~~~v~ 299 (1045)
T 1k32_A 243 SFTDYYPRHLNTDGRRILFSKG--------------------GSIYIFNPDTE---KIEKIEIGDLESPEDRIISIPSKF 299 (1045)
T ss_dssp CCCSSCEEEEEESSSCEEEEET--------------------TEEEEECTTTC---CEEECCCCCCCBCCSEEEECGGGG
T ss_pred CCCCcceeeEcCCCCEEEEEeC--------------------CEEEEecCCce---EeeeeccCcccccccccccccccc
Confidence 1346799999999998742 24777776321 111111100 001234
Q ss_pred EEEEe-cCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc--ceeEEEecCCCEEEEEECCC
Q 003878 304 SGHVT-EDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD--AQYEVIANDDTVFTFLTNKD 380 (789)
Q Consensus 304 ~~~~S-pDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~s~dG~~l~~~tn~~ 380 (789)
.+.|| |||++|++.. ...++++++.++. ...+..... .....|+ ||+.|++.++
T Consensus 300 ~~~~S~pdG~~la~~~------~~~i~~~~~~~~~--------------~~~~~~~~~~~~~~~~~s-dg~~l~~~s~-- 356 (1045)
T 1k32_A 300 AEDFSPLDGDLIAFVS------RGQAFIQDVSGTY--------------VLKVPEPLRIRYVRRGGD-TKVAFIHGTR-- 356 (1045)
T ss_dssp EEEEEECGGGCEEEEE------TTEEEEECTTSSB--------------EEECSCCSCEEEEEECSS-SEEEEEEEET--
T ss_pred eeeecCCCCCEEEEEE------cCEEEEEcCCCCc--------------eEEccCCCcceEEeeeEc-CCCeEEEEEC--
Confidence 68999 9999999876 2468999987642 112222111 1224488 9999998876
Q ss_pred CCCceEE-EEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecc
Q 003878 381 APKYKII-RVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISAR 459 (789)
Q Consensus 381 ~~~~~L~-~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s 459 (789)
..+|+ .+++++++ .+.+..+ ...+..+++++++..++....++ .|++||+++|+....+..+.+.+..++++
T Consensus 357 --~~~l~~~~d~~~~~-~~~l~~~--~~~~~~~~~SpDG~~la~~~~~~--~v~~~d~~tg~~~~~~~~~~~~v~~~~~S 429 (1045)
T 1k32_A 357 --EGDFLGIYDYRTGK-AEKFEEN--LGNVFAMGVDRNGKFAVVANDRF--EIMTVDLETGKPTVIERSREAMITDFTIS 429 (1045)
T ss_dssp --TEEEEEEEETTTCC-EEECCCC--CCSEEEEEECTTSSEEEEEETTS--EEEEEETTTCCEEEEEECSSSCCCCEEEC
T ss_pred --CCceEEEEECCCCC-ceEecCC--ccceeeeEECCCCCEEEEECCCC--eEEEEECCCCceEEeccCCCCCccceEEC
Confidence 36899 99998776 5555532 35577899998766666666554 79999999887643333445555677899
Q ss_pred cCCcEEEEEEcCC------CCCcEEEEEECCCCC
Q 003878 460 REDSVVFISFTSF------LIPGIVYQCNLKTET 487 (789)
Q Consensus 460 ~d~~~l~~~~ss~------~~P~~ly~~dl~tg~ 487 (789)
||++.+++..... ..+..++++|+.+++
T Consensus 430 pDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 430 DNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp TTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CCCCeEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 9999887765532 456799999998873
No 96
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=99.67 E-value=2.3e-15 Score=158.97 Aligned_cols=238 Identities=13% Similarity=0.070 Sum_probs=149.4
Q ss_pred CcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChh
Q 003878 506 FHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEE 585 (789)
Q Consensus 506 ~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~ 585 (789)
+..+.+.+++ +| ..+.+.++.+... .++.|+||++||..+... .|.. ....|.++||.|+++|+||.|....
T Consensus 18 ~~~~~~~~~~-~~-~~~~~~~~~~~~~--~~~~p~vv~~hG~~~~~~--~~~~-~~~~l~~~g~~v~~~d~~G~G~s~~- 89 (315)
T 4f0j_A 18 YPVHYLDFTS-QG-QPLSMAYLDVAPK--KANGRTILLMHGKNFCAG--TWER-TIDVLADAGYRVIAVDQVGFCKSSK- 89 (315)
T ss_dssp SCCEEEEEEE-TT-EEEEEEEEEECCS--SCCSCEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTSCC-
T ss_pred ccceeEEEec-CC-CCeeEEEeecCCC--CCCCCeEEEEcCCCCcch--HHHH-HHHHHHHCCCeEEEeecCCCCCCCC-
Confidence 4566777765 56 6777666555432 356799999999876543 3444 3455555899999999999875432
Q ss_pred HHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccc---ccc
Q 003878 586 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH---KFT 662 (789)
Q Consensus 586 ~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~---~~~ 662 (789)
......+++|+.+.+..+++. .+.++++++|+|+||.+++.++.++|++++++|+..|+....... ...
T Consensus 90 ------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~ 161 (315)
T 4f0j_A 90 ------PAHYQYSFQQLAANTHALLER--LGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKALGVPWR 161 (315)
T ss_dssp ------CSSCCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCSSCHHHHTCCCC
T ss_pred ------CCccccCHHHHHHHHHHHHHH--hCCCceEEEEecHHHHHHHHHHHhCcHhhheeEEecCcccCCcccccchhh
Confidence 112345678888888888776 345699999999999999999999999999999998854211000 000
Q ss_pred CCccchh----------------hcCC----CCcHH-----------------------HHHHHHhcCcccCCCCCCCCC
Q 003878 663 IGHAWVS----------------DFGC----SEEEE-----------------------EFYWLIKYSPLHNVRRPWEQN 699 (789)
Q Consensus 663 ~~~~~~~----------------e~g~----p~~~~-----------------------~~~~l~~~sP~~~v~~~~~~~ 699 (789)
....|.. .+.. +.... .+..+...+....+.++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---- 237 (315)
T 4f0j_A 162 SVDDWYRRDLQTSAEGIRQYQQATYYAGEWRPEFDRWVQMQAGMYRGKGRESVAWNSALTYDMIFTQPVVYELDRL---- 237 (315)
T ss_dssp CHHHHHHHHTTCCHHHHHHHHHHHTSTTCCCGGGHHHHHHHHHHTTSTTHHHHHHHHHHHHHHHHHCCCGGGGGGC----
T ss_pred hhHHHHhhcccCChHHHHHHHHHHHhccccCCchHHHHHHHHHHhhccCcchhhHHHHHhcCccccchhhhhcccC----
Confidence 0000000 0000 00000 11111222233344444
Q ss_pred CCCCCCCCeEEEEecCCCCCCCcHHH------------HHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhh
Q 003878 700 PDKPFQYPSTLLLTADHDDRVVPLHS------------LKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQK 767 (789)
Q Consensus 700 ~~~~~~~pp~Li~~g~~D~~V~~~~~------------~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~ 767 (789)
..|+|+++|++|..||..+. .+..+.+.+. ...+++.+++++||.......
T Consensus 238 ------~~P~lii~G~~D~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~gH~~~~~~p- 300 (315)
T 4f0j_A 238 ------QMPTLLLIGEKDNTAIGKDAAPAELKARLGNYAQLGKDAARR----------IPQATLVEFPDLGHTPQIQAP- 300 (315)
T ss_dssp ------CSCEEEEEETTCCCCTTGGGSCHHHHTTSCCHHHHHHHHHHH----------STTEEEEEETTCCSCHHHHSH-
T ss_pred ------CCCeEEEEecCCCcCccccccccccccccccchhhhhHHHhh----------cCCceEEEeCCCCcchhhhCH-
Confidence 68999999999999995443 4455555554 345789999999998643222
Q ss_pred HHHHHHHHHHHHHH
Q 003878 768 MIDEAADRYGFMAK 781 (789)
Q Consensus 768 ~~~~~~~~~~fl~~ 781 (789)
.+..+.+.+||.+
T Consensus 301 -~~~~~~i~~fl~~ 313 (315)
T 4f0j_A 301 -ERFHQALLEGLQT 313 (315)
T ss_dssp -HHHHHHHHHHHCC
T ss_pred -HHHHHHHHHHhcc
Confidence 3455667777753
No 97
>1gkl_A Endo-1,4-beta-xylanase Y; hydrolase, esterase family 1, inactive mutant; HET: FER; 1.4A {Clostridium thermocellum} SCOP: c.69.1.2 PDB: 1wb4_A* 1wb5_A* 1wb6_A* 1gkk_A*
Probab=99.67 E-value=2.3e-15 Score=159.75 Aligned_cols=205 Identities=10% Similarity=-0.036 Sum_probs=135.6
Q ss_pred cEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCC---CC-HHHHHHHHcC----CeEEEEEeecC
Q 003878 507 HVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPS---FS-VSRTILMRHL----GAVFCIANIRG 578 (789)
Q Consensus 507 ~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~---~~-~~~~~~l~~~----G~~v~~~~~RG 578 (789)
..+.+.+.+.+| .++++++.|++..++++.|+|+++||+.+....+. .. ......|.++ |++|+++|.+|
T Consensus 40 ~~~~~~~~s~~~--~~~~~vy~P~~~~~~~~~Pvlv~lHG~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~ivv~pd~~~ 117 (297)
T 1gkl_A 40 RIVKETYTGING--TKSLNVYLPYGYDPNKKYNIFYLMHGGGENENTIFSNDVKLQNILDHAIMNGELEPLIVVTPTFNG 117 (297)
T ss_dssp EEEEEEEEETTE--EEEEEEEECTTCCTTSCCEEEEEECCTTCCTTSTTSTTTCHHHHHHHHHHTTSSCCEEEEECCSCS
T ss_pred eEEEEEEEcCCC--EEEEEEEeCCCCCCCCCCCEEEEECCCCCCcchhhcccchHHHHHHHHHHcCCCCCEEEEEecCcC
Confidence 467788888765 88999999998766678999999999876543221 11 1223333335 59999999998
Q ss_pred CCCCChhHHhcccccCCcchHHHHHHHHHHHHHcC---------CCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEec
Q 003878 579 GGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG---------YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAH 649 (789)
Q Consensus 579 ~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~---------~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~ 649 (789)
+.+.+..|.. ...+|++..++...... ..|+++++|+|+|+||++++.++.++|++|+++++.
T Consensus 118 ~~~~~~~~~~--------~~~~~l~~~i~~~~~~~~~~~~~~~i~~d~~~~~i~G~S~GG~~al~~a~~~p~~f~~~v~~ 189 (297)
T 1gkl_A 118 GNCTAQNFYQ--------EFRQNVIPFVESKYSTYAESTTPQGIAASRMHRGFGGFAMGGLTTWYVMVNCLDYVAYFMPL 189 (297)
T ss_dssp TTCCTTTHHH--------HHHHTHHHHHHHHSCSSCSSCSHHHHHTTGGGEEEEEETHHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CccchHHHHH--------HHHHHHHHHHHHhCCccccccccccccCCccceEEEEECHHHHHHHHHHHhCchhhheeeEe
Confidence 6543333321 11234444333322110 137789999999999999999999999999999999
Q ss_pred CCcccccccccccCCccchhhcCCCCcHHHH-HHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHH
Q 003878 650 VGVMDMLRYHKFTIGHAWVSDFGCSEEEEEF-YWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKL 728 (789)
Q Consensus 650 ~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~-~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~ 728 (789)
+|...+... + . ...... +.+.. ..++.. ..++++.+|++|.. +.++.++
T Consensus 190 sg~~~~~~~-----~--~-------~~~~~~~~~~~~----~~~~~~----------~~~l~~~~G~~D~~--~~~~~~l 239 (297)
T 1gkl_A 190 SGDYWYGNS-----P--Q-------DKANSIAEAINR----SGLSKR----------EYFVFAATGSEDIA--YANMNPQ 239 (297)
T ss_dssp SCCCCBSSS-----H--H-------HHHHHHHHHHHH----HTCCTT----------SCEEEEEEETTCTT--HHHHHHH
T ss_pred ccccccCCc-----c--c-------hhhhHHHHHHhh----ccCCcC----------cEEEEEEeCCCccc--chhHHHH
Confidence 997543210 0 0 000011 11111 122221 35777889999976 4588899
Q ss_pred HHHHHHhhccCCCCCCCC----------CcEEEEEeCCCCcCC
Q 003878 729 LATMQYVLCTSLENSPQT----------NPIIGRIERKAGHGV 761 (789)
Q Consensus 729 ~~~L~~~~~~~~~~~~~~----------~~~~l~~~~~~gH~~ 761 (789)
+++|++. | .++++.+++++||.+
T Consensus 240 ~~~L~~~----------g~~~~~~~~~~~~~~~~~~~g~gH~~ 272 (297)
T 1gkl_A 240 IEAMKAL----------PHFDYTSDFSKGNFYFLVAPGATHWW 272 (297)
T ss_dssp HHHHHTS----------TTCCBBSCTTTCCEEEEEETTCCSSH
T ss_pred HHHHHHc----------CCccccccccCCceEEEECCCCCcCH
Confidence 9999987 5 589999999999974
No 98
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=99.67 E-value=2.1e-15 Score=152.31 Aligned_cols=184 Identities=13% Similarity=0.050 Sum_probs=134.7
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEE--eecCCCCCChhHHhccc-ccCC----cchHHHHHHHHHH
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIA--NIRGGGEYGEEWHKGGA-LAKK----QNCFDDFISASEY 608 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~--~~RG~g~~g~~~~~~~~-~~~~----~~~~~D~~~~~~~ 608 (789)
++.|+||++||..+... .|. .....|. .||.|+++ +.||.|... |..... .... .....|+.+.+++
T Consensus 36 ~~~~~vv~~HG~~~~~~--~~~-~~~~~l~-~g~~v~~~~~d~~g~g~s~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 109 (226)
T 2h1i_A 36 TSKPVLLLLHGTGGNEL--DLL-PLAEIVD-SEASVLSVRGNVLENGMPR--FFRRLAEGIFDEEDLIFRTKELNEFLDE 109 (226)
T ss_dssp TTSCEEEEECCTTCCTT--TTH-HHHHHHH-TTSCEEEECCSEEETTEEE--SSCEEETTEECHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCCCChh--HHH-HHHHHhc-cCceEEEecCcccCCcchh--hccccCccCcChhhHHHHHHHHHHHHHH
Confidence 46799999999875532 343 3456777 59999999 888866421 111100 0011 1223456667777
Q ss_pred HHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCc
Q 003878 609 LISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSP 688 (789)
Q Consensus 609 L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP 688 (789)
+.++..+++++++++|+|+||.+++.++.++|++++++|+..|..+...
T Consensus 110 ~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~v~~~~~~~~~~------------------------------- 158 (226)
T 2h1i_A 110 AAKEYKFDRNNIVAIGYSNGANIAASLLFHYENALKGAVLHHPMVPRRG------------------------------- 158 (226)
T ss_dssp HHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCSS-------------------------------
T ss_pred HHhhcCCCcccEEEEEEChHHHHHHHHHHhChhhhCEEEEeCCCCCcCc-------------------------------
Confidence 7777667889999999999999999999999999999999998754210
Q ss_pred ccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhH
Q 003878 689 LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKM 768 (789)
Q Consensus 689 ~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~ 768 (789)
...... ..+|+|+++|++|..+++..+.++++.++.. +.++++ +++++||.+.
T Consensus 159 ~~~~~~----------~~~p~l~~~G~~D~~~~~~~~~~~~~~l~~~----------~~~~~~-~~~~~gH~~~------ 211 (226)
T 2h1i_A 159 MQLANL----------AGKSVFIAAGTNDPICSSAESEELKVLLENA----------NANVTM-HWENRGHQLT------ 211 (226)
T ss_dssp CCCCCC----------TTCEEEEEEESSCSSSCHHHHHHHHHHHHTT----------TCEEEE-EEESSTTSCC------
T ss_pred cccccc----------cCCcEEEEeCCCCCcCCHHHHHHHHHHHHhc----------CCeEEE-EeCCCCCCCC------
Confidence 001111 2579999999999999999999999999876 778888 9999999983
Q ss_pred HHHHHHHHHHHHHHh
Q 003878 769 IDEAADRYGFMAKML 783 (789)
Q Consensus 769 ~~~~~~~~~fl~~~l 783 (789)
.+....+.+||.++|
T Consensus 212 ~~~~~~~~~~l~~~l 226 (226)
T 2h1i_A 212 MGEVEKAKEWYDKAF 226 (226)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC
Confidence 244567888998764
No 99
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=99.67 E-value=1.5e-16 Score=175.81 Aligned_cols=149 Identities=11% Similarity=0.017 Sum_probs=110.8
Q ss_pred CCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC------------CCCC---HHHHHHHHcCC
Q 003878 504 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT------------PSFS---VSRTILMRHLG 568 (789)
Q Consensus 504 ~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~------------~~~~---~~~~~~l~~~G 568 (789)
..+..+.+.+++.+| .+|+++++.|++. .++.|+||++||..+.... ..|. ..+...|+++|
T Consensus 83 ~g~~~e~v~~~~~~g-~~l~~~l~~P~~~--~~~~P~Vl~~HG~g~~~~~~~~~~~~~~~~~~~y~~~~~~~a~~la~~G 159 (391)
T 3g8y_A 83 EGYILEKWEFYPFPK-SVSTFLVLKPEHL--KGAVPGVLCIPGSGRTKEGLVGEPGICDKLTEDYNNPKVSMALNMVKEG 159 (391)
T ss_dssp TTEEEEEEEECCSTT-CCEEEEEEEETTC--CSCEEEEEEECCTTCCHHHHTTCCCSSGGGCCCTTSTTTCHHHHHHTTT
T ss_pred CCEEEEEEEEEcCCC-CEEEEEEEeCCCC--CCCCCEEEEeCCCCCCchhhccccccccccchhhcchHHHHHHHHHHCC
Confidence 357788899999999 9999999999864 4789999999997554320 0111 02345666799
Q ss_pred eEEEEEeecCCCCCChhHHhcc--------c----ccCCc----chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHH
Q 003878 569 AVFCIANIRGGGEYGEEWHKGG--------A----LAKKQ----NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLV 632 (789)
Q Consensus 569 ~~v~~~~~RG~g~~g~~~~~~~--------~----~~~~~----~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~ 632 (789)
|+|+++|+||.|+.+..-.... . ...+. ....|+.+++++|.++..+|++||+|+|+|+||+++
T Consensus 160 ~~Vl~~D~rg~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~a 239 (391)
T 3g8y_A 160 YVAVAVDNAAAGEASDLECYDKGWNYDYDVVSRFLLELGWSWLGYTSYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPM 239 (391)
T ss_dssp CEEEECCCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHH
T ss_pred CEEEEecCCCccccCCcccccccccchHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHH
Confidence 9999999999887653211000 0 00011 123799999999999999999999999999999999
Q ss_pred HHHHHhCCCceeEEEecCCccccc
Q 003878 633 GACINQRPDLFGCALAHVGVMDML 656 (789)
Q Consensus 633 ~~~~~~~pd~f~a~v~~~p~~d~~ 656 (789)
+.++.. +++++|+|+..++.++.
T Consensus 240 l~~a~~-~~~i~a~v~~~~~~~~~ 262 (391)
T 3g8y_A 240 MVLGVL-DKDIYAFVYNDFLCQTQ 262 (391)
T ss_dssp HHHHHH-CTTCCEEEEESCBCCHH
T ss_pred HHHHHc-CCceeEEEEccCCCCcc
Confidence 998887 56789998888777663
No 100
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.67 E-value=7.3e-14 Score=155.50 Aligned_cols=206 Identities=14% Similarity=0.142 Sum_probs=144.6
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|||||+.|+|...+. ....|+++++.++.. ..+... ......++|||||++|++
T Consensus 181 v~~~~~Spdg~~la~~s~~~----------------~~~~i~~~d~~tg~~--~~l~~~---~~~~~~~~~spdg~~la~ 239 (415)
T 2hqs_A 181 LMSPAWSPDGSKLAYVTFES----------------GRSALVIQTLANGAV--RQVASF---PRHNGAPAFSPDGSKLAF 239 (415)
T ss_dssp EEEEEECTTSSEEEEEECTT----------------SSCEEEEEETTTCCE--EEEECC---SSCEEEEEECTTSSEEEE
T ss_pred ceeeEEcCCCCEEEEEEecC----------------CCcEEEEEECCCCcE--EEeecC---CCcccCEEEcCCCCEEEE
Confidence 47899999999999987532 235799999987643 233322 234568999999999998
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
...... ...||++|+.++. ...+..... .....|+|||+.|++.++.+ ...+|+.+|+.+++
T Consensus 240 ~~~~~g--~~~i~~~d~~~~~--------------~~~l~~~~~~~~~~~~spdg~~l~~~s~~~-g~~~i~~~d~~~~~ 302 (415)
T 2hqs_A 240 ALSKTG--SLNLYVMDLASGQ--------------IRQVTDGRSNNTEPTWFPDSQNLAFTSDQA-GRPQVYKVNINGGA 302 (415)
T ss_dssp EECTTS--SCEEEEEETTTCC--------------EEECCCCSSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTSSC
T ss_pred EEecCC--CceEEEEECCCCC--------------EEeCcCCCCcccceEECCCCCEEEEEECCC-CCcEEEEEECCCCC
Confidence 775433 5679999998752 223332221 12356999999999988754 35689999998876
Q ss_pred CeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCC
Q 003878 396 DWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLI 474 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~ 474 (789)
.+.+..+. ..+..+.|++++ .|++....++...|++||+++|+. +.+.... .+..++++||++.+++.... ..
T Consensus 303 -~~~l~~~~--~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~-~~l~~~~-~~~~~~~spdg~~l~~~s~~-~~ 376 (415)
T 2hqs_A 303 -PQRITWEG--SQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLSSTF-LDETPSLAPNGTMVIYSSSQ-GM 376 (415)
T ss_dssp -CEECCCSS--SEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE-EECCCSS-SCEEEEECTTSSEEEEEEEE-TT
T ss_pred -EEEEecCC--CcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE-EEecCCC-CcCCeEEcCCCCEEEEEEcC-CC
Confidence 45554443 456778898864 455656666667999999997776 5555443 56678899999988765532 33
Q ss_pred CcEEEEEECCCC
Q 003878 475 PGIVYQCNLKTE 486 (789)
Q Consensus 475 P~~ly~~dl~tg 486 (789)
...+|.+|+.++
T Consensus 377 ~~~l~~~d~~g~ 388 (415)
T 2hqs_A 377 GSVLNLVSTDGR 388 (415)
T ss_dssp EEEEEEEETTSC
T ss_pred ccEEEEEECCCC
Confidence 558999998766
No 101
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=99.67 E-value=3.2e-16 Score=162.64 Aligned_cols=213 Identities=15% Similarity=0.131 Sum_probs=141.1
Q ss_pred CccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCC
Q 003878 537 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 616 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d 616 (789)
+.|+||++||..+.... |.. ....|.++||.|+++|+||.|......... .-....+|+.++++++..+
T Consensus 39 ~~~~vv~~HG~~~~~~~--~~~-~~~~l~~~G~~v~~~d~~G~G~s~~~~~~~----~~~~~~~d~~~~i~~l~~~---- 107 (270)
T 3rm3_A 39 GPVGVLLVHGFTGTPHS--MRP-LAEAYAKAGYTVCLPRLKGHGTHYEDMERT----TFHDWVASVEEGYGWLKQR---- 107 (270)
T ss_dssp SSEEEEEECCTTCCGGG--THH-HHHHHHHTTCEEEECCCTTCSSCHHHHHTC----CHHHHHHHHHHHHHHHHTT----
T ss_pred CCeEEEEECCCCCChhH--HHH-HHHHHHHCCCEEEEeCCCCCCCCccccccC----CHHHHHHHHHHHHHHHHhh----
Confidence 45999999997665433 443 445566589999999999988654322211 1122357888888888765
Q ss_pred CCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccc----cCCccchhhcCCC-------------CcHHH
Q 003878 617 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKF----TIGHAWVSDFGCS-------------EEEEE 679 (789)
Q Consensus 617 ~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~----~~~~~~~~e~g~p-------------~~~~~ 679 (789)
.++++++|+|+||.+++.++.++|+ ++++|+..|..++...... .....|...++.. .....
T Consensus 108 ~~~i~l~G~S~Gg~~a~~~a~~~p~-v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (270)
T 3rm3_A 108 CQTIFVTGLSMGGTLTLYLAEHHPD-ICGIVPINAAVDIPAIAAGMTGGGELPRYLDSIGSDLKNPDVKELAYEKTPTAS 186 (270)
T ss_dssp CSEEEEEEETHHHHHHHHHHHHCTT-CCEEEEESCCSCCHHHHHHSCC---CCSEEECCCCCCSCTTCCCCCCSEEEHHH
T ss_pred CCcEEEEEEcHhHHHHHHHHHhCCC-ccEEEEEcceecccccccchhcchhHHHHHHHhCccccccchHhhcccccChhH
Confidence 5799999999999999999999999 9999999987765432110 0001111111110 00111
Q ss_pred HHHHHhc--CcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCC
Q 003878 680 FYWLIKY--SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKA 757 (789)
Q Consensus 680 ~~~l~~~--sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~ 757 (789)
+..+... .....+.+. .+|+|+++|++|..||+..+.++++++. +.++++.+++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~----------~~P~lii~G~~D~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~ 244 (270)
T 3rm3_A 187 LLQLARLMAQTKAKLDRI----------VCPALIFVSDEDHVVPPGNADIIFQGIS------------STEKEIVRLRNS 244 (270)
T ss_dssp HHHHHHHHHHHHHTGGGC----------CSCEEEEEETTCSSSCTTHHHHHHHHSC------------CSSEEEEEESSC
T ss_pred HHHHHHHHHHHHhhhhhc----------CCCEEEEECCCCcccCHHHHHHHHHhcC------------CCcceEEEeCCC
Confidence 1111110 111233333 6899999999999999999988887765 346789999999
Q ss_pred CcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 758 GHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 758 gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
||.+..... ..+....+.+||.++.|
T Consensus 245 gH~~~~~~~-~~~~~~~i~~fl~~~~~ 270 (270)
T 3rm3_A 245 YHVATLDYD-QPMIIERSLEFFAKHAG 270 (270)
T ss_dssp CSCGGGSTT-HHHHHHHHHHHHHHHC-
T ss_pred CcccccCcc-HHHHHHHHHHHHHhcCC
Confidence 999765433 24567789999988753
No 102
>4fle_A Esterase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein, rossmann fold, HY; 2.10A {Yersinia enterocolitica subsp}
Probab=99.66 E-value=4.1e-16 Score=155.13 Aligned_cols=188 Identities=13% Similarity=-0.017 Sum_probs=119.3
Q ss_pred cEEEEEcCCCCccCCCCCC-HHHHHHHHcC--CeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCC
Q 003878 539 PCLLYGYGGFNISVTPSFS-VSRTILMRHL--GAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 615 (789)
Q Consensus 539 P~ll~~hGg~~~~~~~~~~-~~~~~~l~~~--G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~ 615 (789)
|+|||+||-.++.. ++. .....++.++ |+.|+++|++|.|+ |..+.++.++.. .
T Consensus 3 ptIl~lHGf~ss~~--s~k~~~l~~~~~~~~~~~~v~~pdl~~~g~-------------------~~~~~l~~~~~~--~ 59 (202)
T 4fle_A 3 STLLYIHGFNSSPS--SAKATTFKSWLQQHHPHIEMQIPQLPPYPA-------------------EAAEMLESIVMD--K 59 (202)
T ss_dssp CEEEEECCTTCCTT--CHHHHHHHHHHHHHCTTSEEECCCCCSSHH-------------------HHHHHHHHHHHH--H
T ss_pred cEEEEeCCCCCCCC--ccHHHHHHHHHHHcCCCcEEEEeCCCCCHH-------------------HHHHHHHHHHHh--c
Confidence 89999999433221 221 2234555544 58999999998642 333444455443 2
Q ss_pred CCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCCC--CcHHHHHHHHhcCcccCCC
Q 003878 616 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCS--EEEEEFYWLIKYSPLHNVR 693 (789)
Q Consensus 616 d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p--~~~~~~~~l~~~sP~~~v~ 693 (789)
.+++|+|+|+|+||.+++.++.++|+...+++...+..+......... .....+.+ .......... +....+.
T Consensus 60 ~~~~i~l~G~SmGG~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 134 (202)
T 4fle_A 60 AGQSIGIVGSSLGGYFATWLSQRFSIPAVVVNPAVRPFELLSDYLGEN---QNPYTGQKYVLESRHIYDLK--AMQIEKL 134 (202)
T ss_dssp TTSCEEEEEETHHHHHHHHHHHHTTCCEEEESCCSSHHHHGGGGCEEE---ECTTTCCEEEECHHHHHHHH--TTCCSSC
T ss_pred CCCcEEEEEEChhhHHHHHHHHHhcccchheeeccchHHHHHHhhhhh---ccccccccccchHHHHHHHH--hhhhhhh
Confidence 457999999999999999999999998888877776555433221100 00011111 1122222222 3334444
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHH
Q 003878 694 RPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAA 773 (789)
Q Consensus 694 ~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~ 773 (789)
+. .+|+|++||++|.+||++++.+++. . +++.+++++||.+.... +...
T Consensus 135 ~~----------~~P~LiihG~~D~~Vp~~~s~~l~~---~--------------~~l~i~~g~~H~~~~~~----~~~~ 183 (202)
T 4fle_A 135 ES----------PDLLWLLQQTGDEVLDYRQAVAYYT---P--------------CRQTVESGGNHAFVGFD----HYFS 183 (202)
T ss_dssp SC----------GGGEEEEEETTCSSSCHHHHHHHTT---T--------------SEEEEESSCCTTCTTGG----GGHH
T ss_pred cc----------CceEEEEEeCCCCCCCHHHHHHHhh---C--------------CEEEEECCCCcCCCCHH----HHHH
Confidence 43 6899999999999999999887752 2 26888999999875432 3456
Q ss_pred HHHHHHHHHhCC
Q 003878 774 DRYGFMAKMLGA 785 (789)
Q Consensus 774 ~~~~fl~~~l~~ 785 (789)
.+.+||.-..|+
T Consensus 184 ~I~~FL~~a~~l 195 (202)
T 4fle_A 184 PIVTFLGLATAL 195 (202)
T ss_dssp HHHHHHTCCCCT
T ss_pred HHHHHHhhhhhc
Confidence 788898654444
No 103
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=99.65 E-value=2e-15 Score=164.36 Aligned_cols=148 Identities=14% Similarity=0.089 Sum_probs=101.4
Q ss_pred CCcEEEEEEecCCCceEEEEEEEecCCCC--CCCCccEEEEEcCCCCccCCCCCC---HHHHHHHHcCCeEEEEEeecCC
Q 003878 505 EFHVHQVFVPSKDGSTKIPMFIVSKKNIK--LDGSHPCLLYGYGGFNISVTPSFS---VSRTILMRHLGAVFCIANIRGG 579 (789)
Q Consensus 505 ~~~~~~~~~~s~dg~~~i~~~l~~p~~~~--~~~~~P~ll~~hGg~~~~~~~~~~---~~~~~~l~~~G~~v~~~~~RG~ 579 (789)
.+..+...+++.|| .++.++.+.|.... +.++.|+||++||..+........ ..+...|.++||.|+++|+||.
T Consensus 24 ~~~~~~~~~~~~dG-~~l~~~~~~~~~~~~~~~~~~~~vvl~HG~~~~~~~~~~~~~~~~~a~~l~~~G~~vi~~D~~G~ 102 (377)
T 1k8q_A 24 GYPAEEYEVVTEDG-YILGIDRIPYGRKNSENIGRRPVAFLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGN 102 (377)
T ss_dssp TCCCEEEEEECTTS-EEEEEEEECSCSSCCTTTTTCCEEEEECCTTCCGGGGSSSCTTTCHHHHHHHTTCEEEECCCTTS
T ss_pred CCCceEEEeEcCCC-CEEEEEEecCCCCCccccCCCCeEEEECCCCCchhhhhcCCCcccHHHHHHHCCCCEEEecCCCC
Confidence 45567788899999 99999888665321 124679999999987665432211 1123355558999999999998
Q ss_pred CCCChhHHhcccc-cCCcch----HH-HHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC---ceeEEEecC
Q 003878 580 GEYGEEWHKGGAL-AKKQNC----FD-DFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD---LFGCALAHV 650 (789)
Q Consensus 580 g~~g~~~~~~~~~-~~~~~~----~~-D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd---~f~a~v~~~ 650 (789)
|.....-...... .....+ .+ |+.++++++.+. .+.++++++|||+||.+++.++.++|+ +++++|+.+
T Consensus 103 G~S~~~~~~~~~~~~~~~~~~~~~~~~D~~~~i~~~~~~--~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~ 180 (377)
T 1k8q_A 103 TWARRNLYYSPDSVEFWAFSFDEMAKYDLPATIDFILKK--TGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALA 180 (377)
T ss_dssp TTSCEESSSCTTSTTTTCCCHHHHHHTHHHHHHHHHHHH--HCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEES
T ss_pred CCCCCCCCCCCCcccccCccHHHHHhhhHHHHHHHHHHh--cCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeC
Confidence 7643210000000 000112 23 777788888765 234689999999999999999999998 899999988
Q ss_pred Ccccc
Q 003878 651 GVMDM 655 (789)
Q Consensus 651 p~~d~ 655 (789)
|...+
T Consensus 181 ~~~~~ 185 (377)
T 1k8q_A 181 PVATV 185 (377)
T ss_dssp CCSCC
T ss_pred Cchhc
Confidence 86543
No 104
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=99.65 E-value=8.5e-17 Score=178.14 Aligned_cols=148 Identities=7% Similarity=-0.015 Sum_probs=110.2
Q ss_pred CCCcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccC------------CCCCC---HHHHHHHHcCC
Q 003878 504 SEFHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV------------TPSFS---VSRTILMRHLG 568 (789)
Q Consensus 504 ~~~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~------------~~~~~---~~~~~~l~~~G 568 (789)
..+..+.+.+++.+| .+|+++++.|++. .++.|+||++||+.+... ...|. ..+...|+++|
T Consensus 88 ~g~~~e~v~~~~~~g-~~l~~~l~~P~~~--~~~~P~Vv~~HG~g~~~~~~~~~~g~~~~~~~~y~~~~~~~a~~la~~G 164 (398)
T 3nuz_A 88 EGYRLEKWEFYPLPK-CVSTFLVLIPDNI--NKPVPAILCIPGSGGNKEGLAGEPGIAPKLNDRYKDPKLTQALNFVKEG 164 (398)
T ss_dssp SSEEEEEEEECCSTT-BCEEEEEEEESSC--CSCEEEEEEECCTTCCHHHHHTCCCSSSTTCCSTTCTTTCHHHHHHTTT
T ss_pred CCEEEEEEEEEcCCC-cEEEEEEEeCCCC--CCCccEEEEEcCCCCCcccccccccccccccccccchHHHHHHHHHHCC
Confidence 357788999999999 9999999999874 478999999999865422 11221 12456667799
Q ss_pred eEEEEEeecCCCCCChhHHhcc----------------cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHH
Q 003878 569 AVFCIANIRGGGEYGEEWHKGG----------------ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLV 632 (789)
Q Consensus 569 ~~v~~~~~RG~g~~g~~~~~~~----------------~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~ 632 (789)
|+|+++|+||.|+.+....... ..........|+.+++++|.+++.+|++||+|+|+|+||+++
T Consensus 165 y~Vl~~D~rG~G~s~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a 244 (398)
T 3nuz_A 165 YIAVAVDNPAAGEASDLERYTLGSNYDYDVVSRYLLELGWSYLGYASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPM 244 (398)
T ss_dssp CEEEEECCTTSGGGCSSGGGTTTTSCCHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHH
T ss_pred CEEEEecCCCCCccccccccccccccchhhhhhHHhhcCCCHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHH
Confidence 9999999999887653321100 000111234799999999999999999999999999999999
Q ss_pred HHHHHhCCCceeEEEecCCcccc
Q 003878 633 GACINQRPDLFGCALAHVGVMDM 655 (789)
Q Consensus 633 ~~~~~~~pd~f~a~v~~~p~~d~ 655 (789)
+.++... ++++|+|+.+++..+
T Consensus 245 ~~~aa~~-~~i~a~v~~~~~~~~ 266 (398)
T 3nuz_A 245 MVLGTLD-TSIYAFVYNDFLCQT 266 (398)
T ss_dssp HHHHHHC-TTCCEEEEESCBCCH
T ss_pred HHHHhcC-CcEEEEEEecccccc
Confidence 9988884 578888886665543
No 105
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=99.65 E-value=6.5e-16 Score=179.17 Aligned_cols=139 Identities=15% Similarity=0.100 Sum_probs=108.2
Q ss_pred EEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccC-CCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhH
Q 003878 508 VHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEW 586 (789)
Q Consensus 508 ~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~ 586 (789)
.+.+.+++.|| .+|.+.++.|++ .++.|+||+.||...... ...|.......+.++||+|+.+|+||.|+.+..+
T Consensus 9 ~~~v~i~~~DG-~~L~~~~~~P~~---~~~~P~vv~~~~~g~~~~~~~~y~~~~~~~la~~Gy~vv~~D~RG~G~S~g~~ 84 (587)
T 3i2k_A 9 ASNVMVPMRDG-VRLAVDLYRPDA---DGPVPVLLVRNPYDKFDVFAWSTQSTNWLEFVRDGYAVVIQDTRGLFASEGEF 84 (587)
T ss_dssp EEEEEEECTTS-CEEEEEEEEECC---SSCEEEEEEEESSCTTCHHHHHTTTCCTHHHHHTTCEEEEEECTTSTTCCSCC
T ss_pred EEEEEEECCCC-CEEEEEEEECCC---CCCeeEEEEECCcCCCccccccchhhHHHHHHHCCCEEEEEcCCCCCCCCCcc
Confidence 46689999999 999999999986 357899999876322211 0012111103455599999999999998876544
Q ss_pred HhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc-ccccc
Q 003878 587 HKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV-MDMLR 657 (789)
Q Consensus 587 ~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~-~d~~~ 657 (789)
.. .....+|+.++++||.++.+.+ .+|+++|+|+||+++++++.++|+.++|+|+.++. .|+..
T Consensus 85 ~~------~~~~~~D~~~~i~~l~~~~~~~-~~v~l~G~S~GG~~a~~~a~~~~~~l~a~v~~~~~~~d~~~ 149 (587)
T 3i2k_A 85 VP------HVDDEADAEDTLSWILEQAWCD-GNVGMFGVSYLGVTQWQAAVSGVGGLKAIAPSMASADLYRA 149 (587)
T ss_dssp CT------TTTHHHHHHHHHHHHHHSTTEE-EEEEECEETHHHHHHHHHHTTCCTTEEEBCEESCCSCTCCC
T ss_pred cc------ccchhHHHHHHHHHHHhCCCCC-CeEEEEeeCHHHHHHHHHHhhCCCccEEEEEeCCccccccc
Confidence 32 2357899999999999987766 79999999999999999999999999999999998 87654
No 106
>4f21_A Carboxylesterase/phospholipase family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Francisella tularensis subsp}
Probab=99.65 E-value=1.4e-15 Score=156.52 Aligned_cols=215 Identities=13% Similarity=0.110 Sum_probs=134.9
Q ss_pred CcEEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHH--cCCeEEEEEeecCC----
Q 003878 506 FHVHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMR--HLGAVFCIANIRGG---- 579 (789)
Q Consensus 506 ~~~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~--~~G~~v~~~~~RG~---- 579 (789)
+..+.+.+.+ ..+...++.|+. ...++||++||..+...+ +.. ....+. -.++.+++|+-.-.
T Consensus 13 ~~~~~~~~~~----~~l~y~ii~P~~----~~~~~VI~LHG~G~~~~d--l~~-l~~~l~~~~~~~~~i~P~Ap~~~~~~ 81 (246)
T 4f21_A 13 LGTENLYFQS----NAMNYELMEPAK----QARFCVIWLHGLGADGHD--FVD-IVNYFDVSLDEIRFIFPHADIIPVTI 81 (246)
T ss_dssp --------------CCCCEEEECCSS----CCCEEEEEEEC--CCCCC--GGG-GGGGCCSCCTTEEEEEECGGGSCTTT
T ss_pred cccceEEEec----CCcCceEeCCCC----cCCeEEEEEcCCCCCHHH--HHH-HHHHhhhcCCCeEEEeCCCCcccccc
Confidence 3445555654 346677888874 345789999995433222 221 112222 13678888875321
Q ss_pred --CCCChhHHhcccccC-------CcchHHHHHHHHHHH----HHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEE
Q 003878 580 --GEYGEEWHKGGALAK-------KQNCFDDFISASEYL----ISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCA 646 (789)
Q Consensus 580 --g~~g~~~~~~~~~~~-------~~~~~~D~~~~~~~L----~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~ 646 (789)
+..|..|+....... ....+...++.++.+ .+. .++++||++.|+|+||.+++.++.++|+.|+++
T Consensus 82 ~~~~~~~~Wf~~~~~~~~~~~~~~d~~~i~~~~~~i~~li~~~~~~-gi~~~ri~l~GfSqGg~~a~~~~~~~~~~~a~~ 160 (246)
T 4f21_A 82 NMGMQMRAWYDIKSLDANSLNRVVDVEGINSSIAKVNKLIDSQVNQ-GIASENIILAGFSQGGIIATYTAITSQRKLGGI 160 (246)
T ss_dssp HHHHHHHSCTTCCCC---CGGGGSCCC-CHHHHHHHHHHHHHHHHC--CCGGGEEEEEETTTTHHHHHHHTTCSSCCCEE
T ss_pred CCCCCcccccccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHc-CCChhcEEEEEeCchHHHHHHHHHhCccccccc
Confidence 112445654322111 111223333333333 344 479999999999999999999999999999999
Q ss_pred EecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHH
Q 003878 647 LAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSL 726 (789)
Q Consensus 647 v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~ 726 (789)
|+.++.+.... .+- ...+ .. ...+|+|++||++|++||++.+.
T Consensus 161 i~~sG~lp~~~------------~~~-----------~~~~---~~-----------~~~~Pvl~~HG~~D~vVp~~~~~ 203 (246)
T 4f21_A 161 MALSTYLPAWD------------NFK-----------GKIT---SI-----------NKGLPILVCHGTDDQVLPEVLGH 203 (246)
T ss_dssp EEESCCCTTHH------------HHS-----------TTCC---GG-----------GTTCCEEEEEETTCSSSCHHHHH
T ss_pred eehhhccCccc------------ccc-----------cccc---cc-----------ccCCchhhcccCCCCccCHHHHH
Confidence 99888543111 000 0000 00 12579999999999999999999
Q ss_pred HHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 727 KLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 727 ~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
++++.|++. |.+++++.|++.||+.. .+++.++.+||.+.|++
T Consensus 204 ~~~~~L~~~----------g~~v~~~~y~g~gH~i~------~~~l~~~~~fL~k~l~l 246 (246)
T 4f21_A 204 DLSDKLKVS----------GFANEYKHYVGMQHSVC------MEEIKDISNFIAKTFKI 246 (246)
T ss_dssp HHHHHHHTT----------TCCEEEEEESSCCSSCC------HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHC----------CCCeEEEEECCCCCccC------HHHHHHHHHHHHHHhCC
Confidence 999999988 89999999999999874 24567889999999874
No 107
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.64 E-value=4.2e-14 Score=169.14 Aligned_cols=297 Identities=11% Similarity=0.008 Sum_probs=181.9
Q ss_pred EEEeEEeCCCCcEEEEEEe-cCCceEEEEEEEEcCCCceecccccccccccccCcccee---------------eeeecc
Q 003878 133 ALIKVSVSEDAKYLAYALS-YSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFF---------------HLTISL 196 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~-~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~ 196 (789)
.+..++|||||++|||+.. .++....+|++||+++|+..... ..... .....++. .-..++
T Consensus 38 ~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 38 TLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLV-DSKVV--LPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEE-CGGGT--C--------------------CCEESCCC
T ss_pred CCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEcc-chhhc--ccccccccchhhhhhhhhhhccccCccee
Confidence 3678899999999999887 44455679999999999654311 11000 00000000 002355
Q ss_pred ccccccccccccccceeeEEEeeeccccceeeeeeecc------------cccceEEEEeCCcEEEEEEccCCCCCCCCC
Q 003878 197 LNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQ------------FKFSSIAWTHDSKGFFYSRYPAPKEGKDMD 264 (789)
Q Consensus 197 ~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~------------~~~~~~~wspDg~~i~y~~~~~~~~~~~~~ 264 (789)
.+.|+++ +++|.++ +...+|.+... -....++|||||+.|+|...
T Consensus 115 ~~SpDg~-----------~l~~~~~--~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~---------- 171 (741)
T 2ecf_A 115 QWSPDAQ-----------RLLFPLG--GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRG---------- 171 (741)
T ss_dssp EECTTSS-----------EEEEEET--TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEET----------
T ss_pred EECCCCC-----------EEEEEeC--CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeC----------
Confidence 6779997 4455544 33334433211 12357899999999999852
Q ss_pred CCccccCCcccEEEEEECCCCCCCcEEEEecCCCCe--------------eEEEEEEecCCcEEEEEEEcCCC-------
Q 003878 265 AGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPK--------------YIFSGHVTEDGQYLVMCIEENCD------- 323 (789)
Q Consensus 265 ~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~--------------~~~~~~~SpDG~~l~~~~~~~~~------- 323 (789)
.+|+++++.++.. ..+........ ...++.|||||++|++...+...
T Consensus 172 ----------~~i~~~d~~~g~~--~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~ 239 (741)
T 2ecf_A 172 ----------RNLWVIDLASGRQ--MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRY 239 (741)
T ss_dssp ----------TEEEEEETTTTEE--EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEE
T ss_pred ----------CcEEEEecCCCCE--EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecC
Confidence 2589999876432 12222111100 01358999999999998765321
Q ss_pred ---------------------CceEEEEEECCC-CCCCcccccccCCCCccEeeecc--c--cceeEEEecCCCEEEEEE
Q 003878 324 ---------------------PVNKVYYCDLSA-LPEGLEGFKKRDGLLPFVKLIDG--F--DAQYEVIANDDTVFTFLT 377 (789)
Q Consensus 324 ---------------------~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~l~~~--~--~~~~~~~s~dG~~l~~~t 377 (789)
....||++|+++ +. ...+... . ......| |||+.|++..
T Consensus 240 ~~~p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~--------------~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~ 304 (741)
T 2ecf_A 240 EVYADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQ--------------TQWIDLGKEQDIYLARVNW-RDPQHLSFQR 304 (741)
T ss_dssp EECSSCEEEEEEECCBTTSCCCEEEEEEECSSTTCC--------------CEEECCCSCSSEEEEEEEE-EETTEEEEEE
T ss_pred CCCCCcccceEeecCCCCCCCCeeEEEEEECCCCCc--------------eEEecCCCCcceEEEEEEe-CCCCEEEEEE
Confidence 123799999877 53 1111111 1 1122458 9999999876
Q ss_pred C-CCCCCceEEEEECCCCCCeEEeccCCCCc---eeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeE
Q 003878 378 N-KDAPKYKIIRVDLKEPNDWFEVIPEAERD---VLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSV 453 (789)
Q Consensus 378 n-~~~~~~~L~~~dl~~~~~~~~l~~~~~~~---~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v 453 (789)
. .......|+++|+++++ .+.++...... .+..+.|++++++++....++..+|+.++++ |+ .+.++.....+
T Consensus 305 ~~~~~~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~-~~-~~~l~~~~~~v 381 (741)
T 2ecf_A 305 QSRDQKKLDLVEVTLASNQ-QRVLAHETSPTWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSK-GK-AAALTHGNWSV 381 (741)
T ss_dssp EETTSSEEEEEEEETTTCC-EEEEEEEECSSCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSS-SC-EEESCCSSSCE
T ss_pred ecccCCeEEEEEEECCCCc-eEEEEEcCCCCcCCcCCceEECCCCeEEEEecCCCccEEEEEcCC-CC-eeeeeecceEE
Confidence 4 44456899999999886 45554432222 2357888887778888888887899999987 44 57777665556
Q ss_pred EEe-ecccCCcEEEEEEcCCCCC--cEEEEEECCCC
Q 003878 454 NAI-SARREDSVVFISFTSFLIP--GIVYQCNLKTE 486 (789)
Q Consensus 454 ~~~-s~s~d~~~l~~~~ss~~~P--~~ly~~dl~tg 486 (789)
..+ .++++++.++++.+. ..+ ..+|.++..++
T Consensus 382 ~~~~~~s~dg~~l~~~~~~-~~~~~~~l~~~~~~g~ 416 (741)
T 2ecf_A 382 DELLAVDEKAGLAYFRAGI-ESARESQIYAVPLQGG 416 (741)
T ss_dssp EEEEEEETTTTEEEEEECS-SCTTCBEEEEEETTCC
T ss_pred EeEeEEeCCCCEEEEEEeC-CCCceEEEEEEEcCCC
Confidence 555 589999988776543 333 34666665443
No 108
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=99.63 E-value=9.2e-15 Score=155.69 Aligned_cols=237 Identities=14% Similarity=0.086 Sum_probs=143.1
Q ss_pred EEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCC-CCCChhHH
Q 003878 509 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGG-GEYGEEWH 587 (789)
Q Consensus 509 ~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~-g~~g~~~~ 587 (789)
+...+++.|| .+|.++.+.|++. ..++.|+||++||..+... .|.. ....|.++||.|+.+|+||+ |......
T Consensus 8 ~~~~i~~~dG-~~l~~~~~~p~~~-~~~~~~~VvllHG~g~~~~--~~~~-~~~~L~~~G~~Vi~~D~rGh~G~S~~~~- 81 (305)
T 1tht_A 8 IAHVLRVNNG-QELHVWETPPKEN-VPFKNNTILIASGFARRMD--HFAG-LAEYLSTNGFHVFRYDSLHHVGLSSGSI- 81 (305)
T ss_dssp EEEEEEETTT-EEEEEEEECCCTT-SCCCSCEEEEECTTCGGGG--GGHH-HHHHHHTTTCCEEEECCCBCC--------
T ss_pred eEEEEEcCCC-CEEEEEEecCccc-CCCCCCEEEEecCCccCch--HHHH-HHHHHHHCCCEEEEeeCCCCCCCCCCcc-
Confidence 4556778899 9999988877642 1235689999999765432 3443 45566668999999999997 6432111
Q ss_pred hcccccCCc-chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc----c-
Q 003878 588 KGGALAKKQ-NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK----F- 661 (789)
Q Consensus 588 ~~~~~~~~~-~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~----~- 661 (789)
..... .-.+|+.+++++|...+ .++++++|+|+||.+++.++.+ | +++++|+..|+.++..... .
T Consensus 82 ----~~~~~~~~~~D~~~~~~~l~~~~---~~~~~lvGhSmGG~iA~~~A~~-~-~v~~lvl~~~~~~~~~~~~~~~~~~ 152 (305)
T 1tht_A 82 ----DEFTMTTGKNSLCTVYHWLQTKG---TQNIGLIAASLSARVAYEVISD-L-ELSFLITAVGVVNLRDTLEKALGFD 152 (305)
T ss_dssp -----CCCHHHHHHHHHHHHHHHHHTT---CCCEEEEEETHHHHHHHHHTTT-S-CCSEEEEESCCSCHHHHHHHHHSSC
T ss_pred ----cceehHHHHHHHHHHHHHHHhCC---CCceEEEEECHHHHHHHHHhCc-c-CcCEEEEecCchhHHHHHHHHhhhh
Confidence 01111 12467888888887543 3689999999999999999888 7 7888888877654321100 0
Q ss_pred --cCCccchh---hc-CCCCcHHHH-HHHHhcC------cccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHH
Q 003878 662 --TIGHAWVS---DF-GCSEEEEEF-YWLIKYS------PLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKL 728 (789)
Q Consensus 662 --~~~~~~~~---e~-g~p~~~~~~-~~l~~~s------P~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~ 728 (789)
........ .+ +.......+ ....... +...+.++ ..|+|+++|++|..||+..+.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~PvLii~G~~D~~vp~~~~~~l 222 (305)
T 1tht_A 153 YLSLPIDELPNDLDFEGHKLGSEVFVRDCFEHHWDTLDSTLDKVANT----------SVPLIAFTANNDDWVKQEEVYDM 222 (305)
T ss_dssp GGGSCGGGCCSEEEETTEEEEHHHHHHHHHHTTCSSHHHHHHHHTTC----------CSCEEEEEETTCTTSCHHHHHHH
T ss_pred hhhcchhhCcccccccccccCHHHHHHHHHhccccchhhHHHHHhhc----------CCCEEEEEeCCCCccCHHHHHHH
Confidence 00000000 00 000011111 1111110 11223444 67999999999999999988877
Q ss_pred HHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHH
Q 003878 729 LATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKM 782 (789)
Q Consensus 729 ~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~ 782 (789)
++.+. ....++++++++||..........+.++.+..|....
T Consensus 223 ~~~i~------------~~~~~l~~i~~agH~~~e~p~~~~~fl~~~~~~~~~~ 264 (305)
T 1tht_A 223 LAHIR------------TGHCKLYSLLGSSHDLGENLVVLRNFYQSVTKAAIAM 264 (305)
T ss_dssp HTTCT------------TCCEEEEEETTCCSCTTSSHHHHHHHHHHHHHHHHHH
T ss_pred HHhcC------------CCCcEEEEeCCCCCchhhCchHHHHHHHHHHHHHHHh
Confidence 65543 2246899999999997533333334455555555443
No 109
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.63 E-value=1.9e-14 Score=157.76 Aligned_cols=260 Identities=11% Similarity=0.038 Sum_probs=161.5
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccccee
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFF 213 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 213 (789)
+..++|||||++|||+.+..|. .+|+++|+++++......... .
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~--~~l~~~d~~~~~~~~l~~~~~-----------------------~----------- 81 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGN--RNYYLLNLETQQAVQLTEGKG-----------------------D----------- 81 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSS--CEEEEEETTTTEEEECCCSSC-----------------------B-----------
T ss_pred eecCcCCCCCCEEEEEEecCCC--ceEEEEECCCCcEEEeecCCC-----------------------C-----------
Confidence 4567899999999999886553 478999999987543211110 0
Q ss_pred eEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEE
Q 003878 214 FFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCW 293 (789)
Q Consensus 214 ~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~ 293 (789)
....+.|||||+.|+|.... .+|+++++.++. ...++
T Consensus 82 ----------------------~~~~~~~spdg~~l~~~~~~-------------------~~l~~~d~~~~~--~~~~~ 118 (396)
T 3c5m_A 82 ----------------------NTFGGFISTDERAFFYVKNE-------------------LNLMKVDLETLE--EQVIY 118 (396)
T ss_dssp ----------------------CTTTCEECTTSSEEEEEETT-------------------TEEEEEETTTCC--EEEEE
T ss_pred ----------------------ccccceECCCCCEEEEEEcC-------------------CcEEEEECCCCC--cEEEE
Confidence 02348899999999998642 158999987653 33444
Q ss_pred ecCCCCeeEEE-------------------EEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEe
Q 003878 294 KDPEHPKYIFS-------------------GHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVK 354 (789)
Q Consensus 294 ~~~~~~~~~~~-------------------~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 354 (789)
..+.. +... +.+||||+++++...........||++|++++. ...
T Consensus 119 ~~~~~--~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~--------------~~~ 182 (396)
T 3c5m_A 119 TVDEE--WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGE--------------LEV 182 (396)
T ss_dssp ECCTT--EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCC--------------EEE
T ss_pred ecccc--cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCc--------------EEe
Confidence 43321 1111 235666666554321011235789999998752 122
Q ss_pred eecc-ccceeEEEec-CCCEEEEEECCCC--CCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCe
Q 003878 355 LIDG-FDAQYEVIAN-DDTVFTFLTNKDA--PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVK 429 (789)
Q Consensus 355 l~~~-~~~~~~~~s~-dG~~l~~~tn~~~--~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~ 429 (789)
+... .......|+| ||+.|++.++... ...+|+.+++++++ ++.+..+.....+..+.|++++ .|++....++.
T Consensus 183 ~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~ 261 (396)
T 3c5m_A 183 IHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQ 261 (396)
T ss_dssp EEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC-CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTT
T ss_pred eccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc-eeEeeccCCCccccceEECCCCCEEEEEecCCCC
Confidence 2221 1223356899 8888988876321 12689999998765 5666653323456778898864 46776666655
Q ss_pred EE--EEEEECCCCceeeecc-cCCeeEEEeeccc-CCcEEEEEEcC------------CCCCcEEEEEECCCCCceEEEe
Q 003878 430 YV--LQIRDLKNGSLLHQLP-IEIGSVNAISARR-EDSVVFISFTS------------FLIPGIVYQCNLKTETPEMKIF 493 (789)
Q Consensus 430 ~~--L~~~dl~tG~~~~~l~-~~~~~v~~~s~s~-d~~~l~~~~ss------------~~~P~~ly~~dl~tg~~~~~~l 493 (789)
.. |+++|+++|+. +.+. .+. .. +.+++ |++.+++..+. ......+|++|+.+++ .+.+
T Consensus 262 ~~~~l~~~d~~~g~~-~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~--~~~l 335 (396)
T 3c5m_A 262 TDRVIYKANPETLEN-EEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKS--AQKL 335 (396)
T ss_dssp CCEEEEEECTTTCCE-EEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTB--CCEE
T ss_pred ccceEEEEECCCCCe-EEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCc--eEEc
Confidence 44 99999987765 3443 332 22 67788 99866654322 0123789999998885 4444
Q ss_pred ee
Q 003878 494 RE 495 (789)
Q Consensus 494 ~~ 495 (789)
..
T Consensus 336 ~~ 337 (396)
T 3c5m_A 336 CK 337 (396)
T ss_dssp EE
T ss_pred cC
Confidence 43
No 110
>3h2g_A Esterase; xanthomonas oryzae PV. oryzae, cell WALL degrading enzyme, RICE, virulence, innate immune responses, pathogenesis; 1.86A {Xanthomonas oryzae PV} PDB: 3h2j_A 3h2k_A* 3h2h_A 3h2i_A
Probab=99.63 E-value=9.9e-15 Score=161.52 Aligned_cols=150 Identities=15% Similarity=0.100 Sum_probs=99.9
Q ss_pred CcEEEEEEecCC--C-ceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC---------CCCCHHHHHHHHcCCeEEEE
Q 003878 506 FHVHQVFVPSKD--G-STKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT---------PSFSVSRTILMRHLGAVFCI 573 (789)
Q Consensus 506 ~~~~~~~~~s~d--g-~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~---------~~~~~~~~~~l~~~G~~v~~ 573 (789)
+...++.|.+.+ | +..+.++++.|++....++.|+||++||+.+.... ..+... ...+.++||+|++
T Consensus 44 v~~~~i~y~t~~~~g~~~~~~g~l~~P~~~~~~~~~P~vv~~HG~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~G~~V~~ 122 (397)
T 3h2g_A 44 VRVAEFTYATIGVEGEPATASGVLLIPGGERCSGPYPLLGWGHPTEALRAQEQAKEIRDAKGDDPL-VTRLASQGYVVVG 122 (397)
T ss_dssp EEEEEEEEEEECTTSCEEEEEEEEEEEECTTCCSCEEEEEEECCCCCBTTCCHHHHHHHTTTCSHH-HHTTGGGTCEEEE
T ss_pred eEEEEEEEEecCCCCCeEEEEEEEEeCCCCCCCCCCcEEEEeCCCcCCCCcccccccccccchHHH-HHHHHHCCCEEEE
Confidence 345667776654 3 24688999999886556789999999998776443 224443 3444459999999
Q ss_pred EeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHH-hCC----C-ceeEE
Q 003878 574 ANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACIN-QRP----D-LFGCA 646 (789)
Q Consensus 574 ~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~-~~~d~~~i~i~G~S~GG~l~~~~~~-~~p----d-~f~a~ 646 (789)
+|+||.|..+...............+.|.+.++..+.++ ++.++++|+++|||+||.++++++. ..+ + .+.++
T Consensus 123 ~D~~G~G~s~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~~~~~~~~~~ 202 (397)
T 3h2g_A 123 SDYLGLGKSNYAYHPYLHSASEASATIDAMRAARSVLQHLKTPLSGKVMLSGYSQGGHTAMATQREIEAHLSKEFHLVAS 202 (397)
T ss_dssp ECCTTSTTCCCSSCCTTCHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEEEEETHHHHHHHHHHHHHHHHCTTTSEEEEE
T ss_pred ecCCCCCCCCCCccchhhhhhHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEEECHHHHHHHHHHHHhhhhcCcCcceEEE
Confidence 999998865321111000001113455666666666554 6667889999999999999988762 222 2 57888
Q ss_pred EecCCccccc
Q 003878 647 LAHVGVMDML 656 (789)
Q Consensus 647 v~~~p~~d~~ 656 (789)
++..+..|+.
T Consensus 203 ~~~~~~~~l~ 212 (397)
T 3h2g_A 203 APISGPYALE 212 (397)
T ss_dssp EEESCCSSHH
T ss_pred ecccccccHH
Confidence 8887777764
No 111
>2gzs_A IROE protein; enterobactin, salmochelin, DFP, hydrolase, catalytic DYAD; HET: DFP; 1.40A {Escherichia coli} SCOP: c.69.1.38 PDB: 2gzr_A*
Probab=99.62 E-value=1.1e-14 Score=152.90 Aligned_cols=223 Identities=10% Similarity=0.032 Sum_probs=141.8
Q ss_pred cEEEEEEecCC-CceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHc-CCeEEEEEeecCCCCCC-
Q 003878 507 HVHQVFVPSKD-GSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH-LGAVFCIANIRGGGEYG- 583 (789)
Q Consensus 507 ~~~~~~~~s~d-g~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~g- 583 (789)
..+.+.+.|.. | .++.++++.|++..+.+++|+|++.||+..... ........+.+ .+.+|+.++++++..+.
T Consensus 12 ~~~~~~~~S~~~~-~~~~~~vylP~~y~~~~~yPvly~l~G~~~~~~---~~~~~~~~l~~~~~~ivV~v~~~~~~~~~~ 87 (278)
T 2gzs_A 12 HFSATSFDSVDGT-RHYRVWTAVPNTTAPASGYPILYMLDGNAVMDR---LDDELLKQLSEKTPPVIVAVGYQTNLPFDL 87 (278)
T ss_dssp EEEEEEEECTTSS-CEEEEEEEEESSCCCTTCEEEEEESSHHHHHHH---CCHHHHHHHTTSCCCEEEEEEESSSSSCCH
T ss_pred ceEEEEEEcCCCC-ceEEEEEECCCCCCCCCCCCEEEEeeChhHHHH---HHHHHHHHhccCCCeEEEEEcCCCCCcCcc
Confidence 46777888876 7 899999999999776778998877777543211 11223333432 57888888888653221
Q ss_pred ----hhHHhcc-c-----------c-cCCcchHHHHHH--HHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCcee
Q 003878 584 ----EEWHKGG-A-----------L-AKKQNCFDDFIS--ASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFG 644 (789)
Q Consensus 584 ----~~~~~~~-~-----------~-~~~~~~~~D~~~--~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~ 644 (789)
.++.... . . ..+...+.+++. .+.++.++.-+|++|++|+|+|+||++++.++.+ |++|+
T Consensus 88 ~~R~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~i~~~~~~~~~r~~i~G~S~GG~~a~~~~~~-p~~f~ 166 (278)
T 2gzs_A 88 NSRAYDYTPAAESRKTDLHSGRFSRKSGGSNNFRQLLETRIAPKVEQGLNIDRQRRGLWGHSYGGLFVLDSWLS-SSYFR 166 (278)
T ss_dssp HHHHHHTCCGGGGTTCSCC-----CCCCCHHHHHHHHHHTHHHHHTTTSCEEEEEEEEEEETHHHHHHHHHHHH-CSSCS
T ss_pred cccccccCCCCccccccccccCcCCCcCCHHHHHHHHHHHHHHHHHHhccCCCCceEEEEECHHHHHHHHHHhC-ccccC
Confidence 1111100 0 0 011123344431 2233334444788999999999999999999999 99999
Q ss_pred EEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCC----
Q 003878 645 CALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRV---- 720 (789)
Q Consensus 645 a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V---- 720 (789)
++++.+|.+.+.. ......+.++.+. .. ..+|+++.+|+.|.++
T Consensus 167 ~~~~~s~~~~~~~-------------------~~~~~~~~~~~~~---~~----------~~~~i~l~~G~~d~~~~~~~ 214 (278)
T 2gzs_A 167 SYYSASPSLGRGY-------------------DALLSRVTAVEPL---QF----------CTKHLAIMEGSATQGDNRET 214 (278)
T ss_dssp EEEEESGGGSTTH-------------------HHHHHHHHTSCTT---TT----------TTCEEEEEECCC--------
T ss_pred eEEEeCcchhcCc-------------------chHHHHHHHhhcc---CC----------CCCcEEEEecCccccccccc
Confidence 9999998643210 0111122332211 01 2579999999999875
Q ss_pred ----CcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 721 ----VPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 721 ----~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
+..++.+++++|++. |.++++.++++++|+... +..+...+.||.+
T Consensus 215 ~~~~~~~~~~~~~~~L~~~----------g~~~~~~~~~g~~H~~~~-----~~~~~~~l~fl~~ 264 (278)
T 2gzs_A 215 HAVGVLSKIHTTLTILKDK----------GVNAVFWDFPNLGHGPMF-----NASFRQALLDISG 264 (278)
T ss_dssp ---CHHHHHHHHHHHHHHT----------TCCEEEEECTTCCHHHHH-----HHHHHHHHHHHTT
T ss_pred hhhhhHHHHHHHHHHHHcC----------CCeeEEEEcCCCCccchh-----HHHHHHHHHHHhh
Confidence 478999999999998 999999999999997532 2333456777754
No 112
>2fx5_A Lipase; alpha-beta hydrolase; HET: TLA; 1.80A {Pseudomonas mendocina}
Probab=99.62 E-value=5.3e-15 Score=153.28 Aligned_cols=185 Identities=15% Similarity=0.131 Sum_probs=129.1
Q ss_pred EEEEecCCCCC-CCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHH
Q 003878 524 MFIVSKKNIKL-DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDF 602 (789)
Q Consensus 524 ~~l~~p~~~~~-~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~ 602 (789)
+.+++|++... .++.|+||++||+.+.. ..|.. ....|.++||.|+++|+||++ ...|+
T Consensus 34 ~~~~~p~~~~~~g~~~p~vv~~HG~~~~~--~~~~~-~~~~l~~~G~~v~~~d~~~s~-----------------~~~~~ 93 (258)
T 2fx5_A 34 CRIYRPRDLGQGGVRHPVILWGNGTGAGP--STYAG-LLSHWASHGFVVAAAETSNAG-----------------TGREM 93 (258)
T ss_dssp EEEEEESSTTGGGCCEEEEEEECCTTCCG--GGGHH-HHHHHHHHTCEEEEECCSCCT-----------------TSHHH
T ss_pred EEEEeCCCCcccCCCceEEEEECCCCCCc--hhHHH-HHHHHHhCCeEEEEecCCCCc-----------------cHHHH
Confidence 67788876321 23789999999987643 23333 445565589999999999641 11355
Q ss_pred HHHHHHHHHc---------CCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCC
Q 003878 603 ISASEYLISA---------GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGC 673 (789)
Q Consensus 603 ~~~~~~L~~~---------~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~ 673 (789)
..+++++.+. ..++.++++++|+|+||.+++.++ .+++++++|+..|.....
T Consensus 94 ~~~~~~l~~~~~~~~~~~~~~~~~~~i~l~G~S~GG~~a~~~a--~~~~v~~~v~~~~~~~~~----------------- 154 (258)
T 2fx5_A 94 LACLDYLVRENDTPYGTYSGKLNTGRVGTSGHSQGGGGSIMAG--QDTRVRTTAPIQPYTLGL----------------- 154 (258)
T ss_dssp HHHHHHHHHHHHSSSSTTTTTEEEEEEEEEEEEHHHHHHHHHT--TSTTCCEEEEEEECCSST-----------------
T ss_pred HHHHHHHHhcccccccccccccCccceEEEEEChHHHHHHHhc--cCcCeEEEEEecCccccc-----------------
Confidence 5556665542 245778999999999999998887 457899999877643210
Q ss_pred CCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHH-HHHHHHHHHHhhccCCCCCCCCCcEEEE
Q 003878 674 SEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKLLATMQYVLCTSLENSPQTNPIIGR 752 (789)
Q Consensus 674 p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~l~ 752 (789)
+.. ...+.++ .+|+|+++|++|..+++.. +.+++++ . +.+++++
T Consensus 155 ~~~------------~~~~~~i----------~~P~lii~G~~D~~~~~~~~~~~~~~~---~----------~~~~~~~ 199 (258)
T 2fx5_A 155 GHD------------SASQRRQ----------QGPMFLMSGGGDTIAFPYLNAQPVYRR---A----------NVPVFWG 199 (258)
T ss_dssp TCC------------GGGGGCC----------SSCEEEEEETTCSSSCHHHHTHHHHHH---C----------SSCEEEE
T ss_pred ccc------------hhhhccC----------CCCEEEEEcCCCcccCchhhHHHHHhc---c----------CCCeEEE
Confidence 000 0122333 5799999999999999886 7776655 3 5678999
Q ss_pred EeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 753 IERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 753 ~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
+++++||.......+ +....+.+||.++|.
T Consensus 200 ~~~g~~H~~~~~~~~--~~~~~i~~fl~~~l~ 229 (258)
T 2fx5_A 200 ERRYVSHFEPVGSGG--AYRGPSTAWFRFQLM 229 (258)
T ss_dssp EESSCCTTSSTTTCG--GGHHHHHHHHHHHHH
T ss_pred EECCCCCccccchHH--HHHHHHHHHHHHHhc
Confidence 999999987654332 456678899998774
No 113
>3d59_A Platelet-activating factor acetylhydrolase; secreted protein, alpha/beta-hydrolase-fold, LDL-bound, lipoprotein associated phospholipase A2, LP-PLA2; 1.50A {Homo sapiens} PDB: 3d5e_A 3f97_A* 3f98_A 3f9c_A* 3f96_A*
Probab=99.62 E-value=5.2e-15 Score=162.97 Aligned_cols=207 Identities=14% Similarity=0.107 Sum_probs=135.4
Q ss_pred eEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCC--------------hh
Q 003878 520 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYG--------------EE 585 (789)
Q Consensus 520 ~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g--------------~~ 585 (789)
..+|.....|.. ..++.|+||++||+.+... .|.. ....|+++||+|+++|+||+|... ..
T Consensus 82 ~~~p~~~~~P~~--~~~~~P~Vv~~HG~~~~~~--~~~~-~a~~La~~Gy~V~~~d~~g~g~s~~~~~~~~~~~~~~~~~ 156 (383)
T 3d59_A 82 MTTPANWNSPLR--PGEKYPLVVFSHGLGAFRT--LYSA-IGIDLASHGFIVAAVEHRDRSASATYYFKDQSAAEIGDKS 156 (383)
T ss_dssp CEESSEETCCBC--CSSCEEEEEEECCTTCCTT--TTHH-HHHHHHHTTCEEEEECCCSSCSSEEEECSSHHHHHHTCCE
T ss_pred eeeccccCCCcc--cCCCCCEEEEcCCCCCCch--HHHH-HHHHHHhCceEEEEeccCCCCccceeecCCccccccCCce
Confidence 666665555543 2468899999999876543 3443 455566699999999999976532 11
Q ss_pred HHhc----cccc------CCcchHHHHHHHHHHHHH--------------------cCCCCCCcEEEEeeChHHHHHHHH
Q 003878 586 WHKG----GALA------KKQNCFDDFISASEYLIS--------------------AGYTQSRKLCIEGGSNGGLLVGAC 635 (789)
Q Consensus 586 ~~~~----~~~~------~~~~~~~D~~~~~~~L~~--------------------~~~~d~~~i~i~G~S~GG~l~~~~ 635 (789)
|... +... .-....+|+.+++++|.+ .+.+|++||+++|||+||.+++.+
T Consensus 157 ~~~~~~~~g~~~~~~~~~~~~~~~~d~~~~l~~l~~~~~~~~~~~~~~~~~d~~~~~~~~d~~~i~l~G~S~GG~~a~~~ 236 (383)
T 3d59_A 157 WLYLRTLKQEEETHIRNEQVRQRAKECSQALSLILDIDHGKPVKNALDLKFDMEQLKDSIDREKIAVIGHSFGGATVIQT 236 (383)
T ss_dssp EEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSCCSCCGGGGTTCEEEEEEEEEEETHHHHHHHHH
T ss_pred eeeccccCcccchhhhHHHHHHHHHHHHHHHHHHHHhhcCCccccccccccchhhhhccccccceeEEEEChhHHHHHHH
Confidence 1100 0000 001124688899999876 456788999999999999999999
Q ss_pred HHhCCCceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecC
Q 003878 636 INQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD 715 (789)
Q Consensus 636 ~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~ 715 (789)
+.+.| +++|+|+..|... |...+. ..++ ..|+|++||+
T Consensus 237 a~~~~-~v~a~v~~~~~~~-------------------p~~~~~------------~~~i----------~~P~Lii~g~ 274 (383)
T 3d59_A 237 LSEDQ-RFRCGIALDAWMF-------------------PLGDEV------------YSRI----------PQPLFFINSE 274 (383)
T ss_dssp HHHCT-TCCEEEEESCCCT-------------------TCCGGG------------GGSC----------CSCEEEEEET
T ss_pred HhhCC-CccEEEEeCCccC-------------------CCchhh------------hccC----------CCCEEEEecc
Confidence 88855 6999998877431 100000 1222 5799999999
Q ss_pred CCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCC--------------------chhhHHHHH-HH
Q 003878 716 HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGL--------------------PTQKMIDEA-AD 774 (789)
Q Consensus 716 ~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~--------------------~~~~~~~~~-~~ 774 (789)
+|..+ .. .+..++|... +.+.++.++++++|.+.. ......+.. +.
T Consensus 275 ~D~~~--~~-~~~~~~l~~~----------~~~~~~~~~~g~~H~~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 341 (383)
T 3d59_A 275 YFQYP--AN-IIKMKKCYSP----------DKERKMITIRGSVHQNFADFTFATGKIIGHMLKLKGDIDSNVAIDLSNKA 341 (383)
T ss_dssp TTCCH--HH-HHHHHTTCCT----------TSCEEEEEETTCCGGGGSGGGGSSCHHHHHHTTSSCSSCHHHHHHHHHHH
T ss_pred cccch--hh-HHHHHHHHhc----------CCceEEEEeCCCcCCCcccHhhhhhHHhhhhhcccCCcCHHHHHHHHHHH
Confidence 99743 22 2333444443 778999999999998521 122222333 46
Q ss_pred HHHHHHHHhCCC
Q 003878 775 RYGFMAKMLGAS 786 (789)
Q Consensus 775 ~~~fl~~~l~~~ 786 (789)
+++||+++|+..
T Consensus 342 ~~~Fl~~~L~~~ 353 (383)
T 3d59_A 342 SLAFLQKHLGLH 353 (383)
T ss_dssp HHHHHHHHHTCC
T ss_pred HHHHHHHHcCCc
Confidence 999999999754
No 114
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=99.61 E-value=1.1e-14 Score=140.76 Aligned_cols=173 Identities=12% Similarity=0.037 Sum_probs=120.7
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 615 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~ 615 (789)
++.|+||++||..+......+. .....+.++||.|+.+|+||.|.... ........+++.++++++.+..
T Consensus 2 ~~~~~vv~~HG~~~~~~~~~~~-~~~~~l~~~g~~v~~~d~~g~g~s~~-------~~~~~~~~~~~~~~~~~~~~~~-- 71 (176)
T 2qjw_A 2 MSRGHCILAHGFESGPDALKVT-ALAEVAERLGWTHERPDFTDLDARRD-------LGQLGDVRGRLQRLLEIARAAT-- 71 (176)
T ss_dssp CSSCEEEEECCTTCCTTSHHHH-HHHHHHHHTTCEEECCCCHHHHTCGG-------GCTTCCHHHHHHHHHHHHHHHH--
T ss_pred CCCcEEEEEeCCCCCccHHHHH-HHHHHHHHCCCEEEEeCCCCCCCCCC-------CCCCCCHHHHHHHHHHHHHhcC--
Confidence 4679999999976543222222 34556666899999999998654211 1111223344555666766653
Q ss_pred CCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCC
Q 003878 616 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRP 695 (789)
Q Consensus 616 d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~ 695 (789)
+.++++++|+|+||.+++.++.++| ++++|+..|..+...+. .....
T Consensus 72 ~~~~~~l~G~S~Gg~~a~~~a~~~~--~~~~v~~~~~~~~~~~~-------------------------------~~~~~ 118 (176)
T 2qjw_A 72 EKGPVVLAGSSLGSYIAAQVSLQVP--TRALFLMVPPTKMGPLP-------------------------------ALDAA 118 (176)
T ss_dssp TTSCEEEEEETHHHHHHHHHHTTSC--CSEEEEESCCSCBTTBC-------------------------------CCCCC
T ss_pred CCCCEEEEEECHHHHHHHHHHHhcC--hhheEEECCcCCccccC-------------------------------ccccc
Confidence 4579999999999999999999988 99999988876542110 02232
Q ss_pred CCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHH
Q 003878 696 WEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADR 775 (789)
Q Consensus 696 ~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~ 775 (789)
.+|+|+++|++|..||+.++.++++.+ . +++.++ ++||.+.. ...+..+.+
T Consensus 119 ----------~~P~l~i~g~~D~~~~~~~~~~~~~~~-~--------------~~~~~~-~~~H~~~~---~~~~~~~~i 169 (176)
T 2qjw_A 119 ----------AVPISIVHAWHDELIPAADVIAWAQAR-S--------------ARLLLV-DDGHRLGA---HVQAASRAF 169 (176)
T ss_dssp ----------SSCEEEEEETTCSSSCHHHHHHHHHHH-T--------------CEEEEE-SSCTTCTT---CHHHHHHHH
T ss_pred ----------CCCEEEEEcCCCCccCHHHHHHHHHhC-C--------------ceEEEe-CCCccccc---cHHHHHHHH
Confidence 679999999999999999999988776 2 267777 89999842 223455667
Q ss_pred HHHHH
Q 003878 776 YGFMA 780 (789)
Q Consensus 776 ~~fl~ 780 (789)
.+||.
T Consensus 170 ~~fl~ 174 (176)
T 2qjw_A 170 AELLQ 174 (176)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 77775
No 115
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.61 E-value=5.3e-14 Score=154.06 Aligned_cols=313 Identities=12% Similarity=0.047 Sum_probs=183.9
Q ss_pred CCceEeCCEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEE
Q 003878 84 DAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLM 163 (789)
Q Consensus 84 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~ 163 (789)
....++|.+++|.....+.. .||+.+..+++.+.|++... ..+..+.|||||++|+|+... .+|+++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~--~l~~~d~~~g~~~~lt~~~~------~~~~~~~~spdg~~l~~~~~~-----~~l~~~ 107 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPW--NYYLLDLNTQVATQLTEGRG------DNTFGGFLSPDDDALFYVKDG-----RNLMRV 107 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSC--EEEEEETTTCEEEECCCSSC------BCSSSCEECTTSSEEEEEETT-----TEEEEE
T ss_pred ccCCCCCCEEEEEEcCCCCc--eEEEEeCCCCceEEeeeCCC------CCccceEEcCCCCEEEEEeCC-----CeEEEE
Confidence 34567899999988754433 48888766666555554321 112246799999999998742 379999
Q ss_pred EcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeecccccceEEEE
Q 003878 164 RIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWT 243 (789)
Q Consensus 164 dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~ws 243 (789)
|+++++..... .. |.+. . ......++
T Consensus 108 d~~~g~~~~~~--~~---------------------~~~~--------------------------~-----~~~~~~~~ 133 (388)
T 3pe7_A 108 DLATLEENVVY--QV---------------------PAEW--------------------------V-----GYGTWVAN 133 (388)
T ss_dssp ETTTCCEEEEE--EC---------------------CTTE--------------------------E-----EEEEEEEC
T ss_pred ECCCCcceeee--ec---------------------hhhc--------------------------c-----cccceeEC
Confidence 99999654311 11 0000 0 01223448
Q ss_pred eCCcEEEEEEccCCCCCCCCCCCc----cccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEec-CCcEEEEEE
Q 003878 244 HDSKGFFYSRYPAPKEGKDMDAGT----ETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCI 318 (789)
Q Consensus 244 pDg~~i~y~~~~~~~~~~~~~~~~----~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~Sp-DG~~l~~~~ 318 (789)
|||+.++.......+... ..... .-.......|+++++.++.. ..+.... ..+..+.||| ||++|++..
T Consensus 134 ~dg~~l~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~d~~~g~~--~~l~~~~---~~~~~~~~sp~dg~~l~~~~ 207 (388)
T 3pe7_A 134 SDCTKLVGIEIRREDWVP-LTDWKKFHEFYFTKPCCRLMRVDLKTGES--TVILQEN---QWLGHPIYRPYDDSTVAFCH 207 (388)
T ss_dssp TTSSEEEEEEEEGGGCCC-CCSHHHHHHHGGGCCCEEEEEEETTTCCE--EEEEEES---SCEEEEEEETTEEEEEEEEE
T ss_pred CCCCeeccccccCccccc-ccccchhhhhhccCCcceEEEEECCCCce--EEeecCC---ccccccEECCCCCCEEEEEE
Confidence 999998865432210000 00000 00012336799999987643 3343332 2356789999 999999987
Q ss_pred EcCCC-CceEEEEEECCCCCCCcccccccCCCCccEeeeccc---cceeEEEecCCCEEEEEECCCCC-CceEEEEECCC
Q 003878 319 EENCD-PVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF---DAQYEVIANDDTVFTFLTNKDAP-KYKIIRVDLKE 393 (789)
Q Consensus 319 ~~~~~-~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~s~dG~~l~~~tn~~~~-~~~L~~~dl~~ 393 (789)
..... ...+||+++++++. ...+.... ....+.|+|||+.|++.++..+. ...|+++|+++
T Consensus 208 ~~~~~~~~~~l~~~d~~~~~--------------~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~ 273 (388)
T 3pe7_A 208 EGPHDLVDARMWLINEDGTN--------------MRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPET 273 (388)
T ss_dssp CSCTTTSSCSEEEEETTSCC--------------CEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTT
T ss_pred ecCCCCCcceEEEEeCCCCc--------------eEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCC
Confidence 54321 24579999987642 12232221 11235699999999888776432 34699999998
Q ss_pred CCCeEEeccCCCC-ce---eeeEEEecC-CEEEEEEEe------CCeEEEEEEECCCCceeeecccCCe-----------
Q 003878 394 PNDWFEVIPEAER-DV---LESATAVNL-NQMIVSYLS------DVKYVLQIRDLKNGSLLHQLPIEIG----------- 451 (789)
Q Consensus 394 ~~~~~~l~~~~~~-~~---i~~v~~~~~-~~lv~~~~~------~g~~~L~~~dl~tG~~~~~l~~~~~----------- 451 (789)
++ .+.+...... .. ..+..|+++ +.+++.... .+...|+++|+++|+. +.|+.+..
T Consensus 274 g~-~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~ 351 (388)
T 3pe7_A 274 LE-NRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQ-HRVARHDTSWKVFEGDRQV 351 (388)
T ss_dssp CC-EEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEE-EEEEECCCCCCCBTTBSST
T ss_pred Cc-eEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCce-EEeccccCccccccccccc
Confidence 86 3444332210 00 112245553 455554433 4556899999997765 56654433
Q ss_pred eEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 452 SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 452 ~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
.+..++++||++.+++.... ...+.+|.+++.++
T Consensus 352 ~~~~~~~spDg~~l~~~s~~-~g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 352 THPHPSFTPDDKQILFTSDV-HGKPALYLATLPES 385 (388)
T ss_dssp TCCCCEECTTSSEEEEEECT-TSSCEEEEEECCGG
T ss_pred CCCCccCCCCCCEEEEEecC-CCceeEEEEECChh
Confidence 24456889999988877543 56678999998765
No 116
>3c8d_A Enterochelin esterase; alpha-beta-alpha sandwich, IROD, iron aquisition, structural genomics, PSI-2, protein structure initiative; HET: CIT; 1.80A {Shigella flexneri 2a str} SCOP: b.1.18.20 c.69.1.2 PDB: 2b20_A 3c87_A* 3c8h_A 3mga_A*
Probab=99.61 E-value=5.2e-15 Score=163.69 Aligned_cols=224 Identities=14% Similarity=0.068 Sum_probs=147.1
Q ss_pred cEEEEEEecC-CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeE----EEEEeecCCCC
Q 003878 507 HVHQVFVPSK-DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAV----FCIANIRGGGE 581 (789)
Q Consensus 507 ~~~~~~~~s~-dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~----v~~~~~RG~g~ 581 (789)
..+.+.+.|. .| ..++++++.|++.. .++.|+|+++||+...... .+......+.+ +|++ |+.+|++|++.
T Consensus 167 ~v~~~~~~S~~~g-~~~~~~vy~P~~~~-~~~~PvlvllHG~~~~~~~-~~~~~~~~l~~-~g~~~p~iVV~~d~~~~~~ 242 (403)
T 3c8d_A 167 PAKEIIWKSERLK-NSRRVWIFTTGDVT-AEERPLAVLLDGEFWAQSM-PVWPVLTSLTH-RQQLPPAVYVLIDAIDTTH 242 (403)
T ss_dssp CCEEEEEEETTTT-EEEEEEEEEC------CCCCEEEESSHHHHHHTS-CCHHHHHHHHH-TTSSCSCEEEEECCCSHHH
T ss_pred ceEEEEEEccccC-CcEEEEEEeCCCCC-CCCCCEEEEeCCHHHhhcC-cHHHHHHHHHH-cCCCCCeEEEEECCCCCcc
Confidence 3466777764 68 89999999998753 5689999999996432221 22222334444 7874 99999876321
Q ss_pred CChhHHhcccccCCcchHHHHH--HHHHHHHHc-C-CCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccc
Q 003878 582 YGEEWHKGGALAKKQNCFDDFI--SASEYLISA-G-YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR 657 (789)
Q Consensus 582 ~g~~~~~~~~~~~~~~~~~D~~--~~~~~L~~~-~-~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~ 657 (789)
.... ......+.|++ +++.++.++ + ..|+++++|+|+|+||++++.++.++|++|+++++.+|.+++..
T Consensus 243 -----r~~~--~~~~~~~~~~l~~el~~~i~~~~~~~~d~~~~~l~G~S~GG~~al~~a~~~p~~f~~~~~~sg~~~~~~ 315 (403)
T 3c8d_A 243 -----RAHE--LPCNADFWLAVQQELLPLVKVIAPFSDRADRTVVAGQSFGGLSALYAGLHWPERFGCVLSQSGSYWWPH 315 (403)
T ss_dssp -----HHHH--SSSCHHHHHHHHHTHHHHHHHHSCCCCCGGGCEEEEETHHHHHHHHHHHHCTTTCCEEEEESCCTTTTC
T ss_pred -----cccc--CCChHHHHHHHHHHHHHHHHHHCCCCCCCCceEEEEECHHHHHHHHHHHhCchhhcEEEEeccccccCC
Confidence 1110 01123455554 456666654 2 35889999999999999999999999999999999999875322
Q ss_pred cccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhc
Q 003878 658 YHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 737 (789)
Q Consensus 658 ~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~ 737 (789)
. +.+.+....+.+.. . .... ..+|+++.||+.|+.+ ..++.+++++|++.
T Consensus 316 ~-------------~~~~~~~~~~~~~~-~---~~~~----------~~~~i~l~~G~~D~~~-~~~~~~l~~~L~~~-- 365 (403)
T 3c8d_A 316 R-------------GGQQEGVLLEKLKA-G---EVSA----------EGLRIVLEAGIREPMI-MRANQALYAQLHPI-- 365 (403)
T ss_dssp T-------------TSSSCCHHHHHHHT-T---SSCC----------CSCEEEEEEESSCHHH-HHHHHHHHHHTGGG--
T ss_pred C-------------CCCcHHHHHHHHHh-c---cccC----------CCceEEEEeeCCCchh-HHHHHHHHHHHHhC--
Confidence 1 01111111122222 1 1122 2578999999998754 67899999999988
Q ss_pred cCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 738 TSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 738 ~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
|.++++.++++ ||... .....+.+.+.||.+.+.
T Consensus 366 --------G~~v~~~~~~G-gH~~~----~w~~~l~~~l~~l~~~~~ 399 (403)
T 3c8d_A 366 --------KESIFWRQVDG-GHDAL----CWRGGLMQGLIDLWQPLF 399 (403)
T ss_dssp --------TTSEEEEEESC-CSCHH----HHHHHHHHHHHHHHGGGT
T ss_pred --------CCCEEEEEeCC-CCCHH----HHHHHHHHHHHHHhcccc
Confidence 99999999998 69842 123556778888876543
No 117
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.60 E-value=6e-13 Score=138.49 Aligned_cols=258 Identities=14% Similarity=0.067 Sum_probs=164.0
Q ss_pred eEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCC-Cceecccccccccccc
Q 003878 105 SVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED-QIVEADALSWVCFCFS 183 (789)
Q Consensus 105 ~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~t-g~~~~~~~~~~~~~~~ 183 (789)
..|++.+..+++.+.++... ..+..++|||||++|+++. .+ .|++||+++ ++..... ...
T Consensus 22 ~~i~~~d~~~~~~~~~~~~~-------~~v~~~~~spdg~~l~~~~--~~----~i~~~d~~~~~~~~~~~-~~~----- 82 (297)
T 2ojh_A 22 SSIEIFNIRTRKMRVVWQTP-------ELFEAPNWSPDGKYLLLNS--EG----LLYRLSLAGDPSPEKVD-TGF----- 82 (297)
T ss_dssp EEEEEEETTTTEEEEEEEES-------SCCEEEEECTTSSEEEEEE--TT----EEEEEESSSCCSCEECC-CTT-----
T ss_pred eeEEEEeCCCCceeeeccCC-------cceEeeEECCCCCEEEEEc--CC----eEEEEeCCCCCCceEec-ccc-----
Confidence 45777765555555555432 2367889999999999864 22 799999999 7554311 110
Q ss_pred cCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCC
Q 003878 184 HSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDM 263 (789)
Q Consensus 184 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~ 263 (789)
+.. ....++|+|||+.|++.....
T Consensus 83 ----------------~~~---------------------------------~~~~~~~spdg~~l~~~~~~~------- 106 (297)
T 2ojh_A 83 ----------------ATI---------------------------------CNNDHGISPDGALYAISDKVE------- 106 (297)
T ss_dssp ----------------CCC---------------------------------BCSCCEECTTSSEEEEEECTT-------
T ss_pred ----------------ccc---------------------------------cccceEECCCCCEEEEEEeCC-------
Confidence 000 246799999999999986432
Q ss_pred CCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccc
Q 003878 264 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 343 (789)
Q Consensus 264 ~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 343 (789)
....+|+.+++.+... ..+ .... . ...+.|||||++|++...... ...||.+++.++.
T Consensus 107 --------~~~~~l~~~~~~~~~~--~~~-~~~~-~--~~~~~~spdg~~l~~~~~~~~--~~~l~~~~~~~~~------ 164 (297)
T 2ojh_A 107 --------FGKSAIYLLPSTGGTP--RLM-TKNL-P--SYWHGWSPDGKSFTYCGIRDQ--VFDIYSMDIDSGV------ 164 (297)
T ss_dssp --------TSSCEEEEEETTCCCC--EEC-CSSS-S--EEEEEECTTSSEEEEEEEETT--EEEEEEEETTTCC------
T ss_pred --------CCcceEEEEECCCCce--EEe-ecCC-C--ccceEECCCCCEEEEEECCCC--ceEEEEEECCCCc------
Confidence 1345688888765432 222 2211 1 456899999999998765433 4678888887642
Q ss_pred cccCCCCccEeeeccc-cceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCE-EE
Q 003878 344 KKRDGLLPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MI 421 (789)
Q Consensus 344 ~~~~~~~~~~~l~~~~-~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~-lv 421 (789)
...+.... ......|+|+|+.|++.+..+ ...+|+.+++.++. ...+..+. ..+..+.|++++. ++
T Consensus 165 --------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~-~~~~i~~~~~~~~~-~~~~~~~~--~~~~~~~~s~dg~~l~ 232 (297)
T 2ojh_A 165 --------ETRLTHGEGRNDGPDYSPDGRWIYFNSSRT-GQMQIWRVRVDGSS-VERITDSA--YGDWFPHPSPSGDKVV 232 (297)
T ss_dssp --------EEECCCSSSCEEEEEECTTSSEEEEEECTT-SSCEEEEEETTSSC-EEECCCCS--EEEEEEEECTTSSEEE
T ss_pred --------ceEcccCCCccccceECCCCCEEEEEecCC-CCccEEEECCCCCC-cEEEecCC--cccCCeEECCCCCEEE
Confidence 12222211 122345999999999887654 46789999987665 45554433 4567788888654 55
Q ss_pred EEEEeC--------CeEEEEEEECCCCceeeecc--cCCeeEEEeecccCCcEEEEEEcC
Q 003878 422 VSYLSD--------VKYVLQIRDLKNGSLLHQLP--IEIGSVNAISARREDSVVFISFTS 471 (789)
Q Consensus 422 ~~~~~~--------g~~~L~~~dl~tG~~~~~l~--~~~~~v~~~s~s~d~~~l~~~~ss 471 (789)
+..... +...|++||+++++...... ...+.+..+.++|+++.+++....
T Consensus 233 ~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 292 (297)
T 2ojh_A 233 FVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDEFAYVRYF 292 (297)
T ss_dssp EEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSEEEEEEEC
T ss_pred EEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCEEEEEEec
Confidence 544443 34689999998776522222 223345567889999988876544
No 118
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase, putative lipase; HET: CME CSO; 1.90A {Saccharomyces cerevisiae} PDB: 2y6v_A*
Probab=99.59 E-value=8.3e-15 Score=161.45 Aligned_cols=239 Identities=12% Similarity=0.044 Sum_probs=146.0
Q ss_pred EecCCCceEEEEEEEecCC---CCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHH----cCCe---EEEEEeecCCCCC
Q 003878 513 VPSKDGSTKIPMFIVSKKN---IKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMR----HLGA---VFCIANIRGGGEY 582 (789)
Q Consensus 513 ~~s~dg~~~i~~~l~~p~~---~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~----~~G~---~v~~~~~RG~g~~ 582 (789)
+...|| .+|.+..+.|.+ ..+.++.|+||++||..+... .|.... ..|. +.|| .|+++|+||.|..
T Consensus 25 ~~~~dg-~~l~~~~~g~~~~~~~~~~~~~~~vvllHG~~~~~~--~~~~~~-~~L~~~~~~~G~~~~~vi~~D~~G~G~S 100 (398)
T 2y6u_A 25 LCATDR-LELTYDVYTSAERQRRSRTATRLNLVFLHGSGMSKV--VWEYYL-PRLVAADAEGNYAIDKVLLIDQVNHGDS 100 (398)
T ss_dssp SSTTCC-CEEEEEEEEESCTTTCCTTCEEEEEEEECCTTCCGG--GGGGGG-GGSCCCBTTTTEEEEEEEEECCTTSHHH
T ss_pred ccCCCc-eEEEEEEEecCCCCCCCCCCCCCeEEEEcCCCCcHH--HHHHHH-HHHHHhhhhcCcceeEEEEEcCCCCCCC
Confidence 557799 999999998865 122355689999999876543 233322 3343 3589 9999999996642
Q ss_pred ChhHHhcccccCCcchHHHHHHHHHHHHHc-C---CCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccc
Q 003878 583 GEEWHKGGALAKKQNCFDDFISASEYLISA-G---YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY 658 (789)
Q Consensus 583 g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~-~---~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~ 658 (789)
.. ..........++.+..+.+..+++. . -.++.+++++|+|+||.+++.++.++|++++++|+..|.......
T Consensus 101 ~~---~~~~~~~~~~~~~~~~~dl~~~l~~~~~~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~ 177 (398)
T 2y6u_A 101 AV---RNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLFHLLILIEPVVITRKA 177 (398)
T ss_dssp HH---HTTTTBCSCCCHHHHHHHHHHHHHHHTCSSTTCSEEEEEEEETHHHHHHHHHHHHCTTSCSEEEEESCCCSCCCC
T ss_pred CC---CCccccCCCCCcchHHHHHHHHHHHhcccccccCCceEEEEEChhHHHHHHHHHhCchheeEEEEeccccccccc
Confidence 21 1100011233444444444333332 1 134456999999999999999999999999999999887664210
Q ss_pred -------cc---------------ccCCccc---------hh--hcCCCCcHHHHHHHHhc-------------------
Q 003878 659 -------HK---------------FTIGHAW---------VS--DFGCSEEEEEFYWLIKY------------------- 686 (789)
Q Consensus 659 -------~~---------------~~~~~~~---------~~--e~g~p~~~~~~~~l~~~------------------- 686 (789)
.. ......| .. .+....+++..+.+...
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (398)
T 2y6u_A 178 IGAGRPGLPPDSPQIPENLYNSLRLKTCDHFANESEYVKYMRNGSFFTNAHSQILQNIIDFERTKASGDDEDGGPVRTKM 257 (398)
T ss_dssp CSCCCTTCCTTCCCCCHHHHHHHHHTCCCEESSHHHHHHHHHHTSTTTTSCHHHHHHHHHHHEEC--------CCEEESS
T ss_pred cccccccccccccccchhhHHHhhhhccccCCCHHHHHHHhhcCcccccCCHHHHHHHHHhcCccccccccCCCceEecC
Confidence 00 0000000 00 01111233333222211
Q ss_pred ---------C--------cccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcE
Q 003878 687 ---------S--------PLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPI 749 (789)
Q Consensus 687 ---------s--------P~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 749 (789)
. +...+..+ .+|+|+++|++|..||+..+.++.+.+. .+
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~PvLii~G~~D~~~~~~~~~~l~~~~~--------------~~ 313 (398)
T 2y6u_A 258 EQAQNLLCYMNMQTFAPFLISNVKFV----------RKRTIHIVGARSNWCPPQNQLFLQKTLQ--------------NY 313 (398)
T ss_dssp CHHHHHHTTSCGGGTHHHHHHHGGGC----------CSEEEEEEETTCCSSCHHHHHHHHHHCS--------------SE
T ss_pred CchhhhhhhcccccchHHHHHhcccc----------CCCEEEEEcCCCCCCCHHHHHHHHHhCC--------------Cc
Confidence 0 00112222 6899999999999999988877766543 35
Q ss_pred EEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 750 IGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 750 ~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
++.+++++||...... ..+....+.+||.+++.
T Consensus 314 ~~~~~~~~gH~~~~e~--p~~~~~~i~~fl~~~~~ 346 (398)
T 2y6u_A 314 HLDVIPGGSHLVNVEA--PDLVIERINHHIHEFVL 346 (398)
T ss_dssp EEEEETTCCTTHHHHS--HHHHHHHHHHHHHHHHH
T ss_pred eEEEeCCCCccchhcC--HHHHHHHHHHHHHHHHH
Confidence 7899999999864322 23566778899988763
No 119
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.58 E-value=1.8e-13 Score=163.99 Aligned_cols=293 Identities=11% Similarity=0.043 Sum_probs=173.3
Q ss_pred EeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceee
Q 003878 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFF 214 (789)
Q Consensus 135 ~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 214 (789)
.+++|||||++|+.. .| +|++||++||+.... +.... +.-+..-..+..++|+++
T Consensus 20 ~~~~w~~dg~~~~~~---~~----~i~~~~~~~~~~~~~-~~~~~------~~~~~~~~~~~~~Spdg~----------- 74 (740)
T 4a5s_A 20 YSLRWISDHEYLYKQ---EN----NILVFNAEYGNSSVF-LENST------FDEFGHSINDYSISPDGQ----------- 74 (740)
T ss_dssp CCEEECSSSEEEEEE---TT----EEEEEETTTCCEEEE-ECTTT------TTTCCSCCCEEEECTTSS-----------
T ss_pred cccEECCCCcEEEEc---CC----cEEEEECCCCceEEE-Eechh------hhhhcccccceEECCCCC-----------
Confidence 468899999877653 23 799999999975421 11110 000000001234579997
Q ss_pred EEEeeecccc------ceeeeeeec------cc-----ccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEE
Q 003878 215 FYLFSLVKST------IYSFWSVVS------QF-----KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEF 277 (789)
Q Consensus 215 ~~~~~s~~~g------~~~l~~~~~------~~-----~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i 277 (789)
+++|.++... ...+|.++. ++ ....++|||||+.|+|++. ..|
T Consensus 75 ~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~--------------------~~i 134 (740)
T 4a5s_A 75 FILLEYNYVKQWRHSYTASYDIYDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWN--------------------NDI 134 (740)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCTTEEEEEECSSTTCEEEEET--------------------TEE
T ss_pred EEEEEECCeeeEEEccceEEEEEECCCCcEEEcccCCCcceeeEECCCCCEEEEEEC--------------------CeE
Confidence 6777776432 245555554 11 1367999999999999853 248
Q ss_pred EEEECCCCCCCcEEEEecCCCCee---------------EEEEEEecCCcEEEEEEEcCCC-------------------
Q 003878 278 YYHFLGTKQSEDILCWKDPEHPKY---------------IFSGHVTEDGQYLVMCIEENCD------------------- 323 (789)
Q Consensus 278 ~~~~lg~~~~~~~~~~~~~~~~~~---------------~~~~~~SpDG~~l~~~~~~~~~------------------- 323 (789)
|++++.++... .+.........+ ..++.|||||++|++.+.+...
T Consensus 135 ~~~~~~~~~~~-~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~ 213 (740)
T 4a5s_A 135 YVKIEPNLPSY-RITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKT 213 (740)
T ss_dssp EEESSTTSCCE-ECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEE
T ss_pred EEEECCCCceE-EEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcc
Confidence 88888665422 111111110000 1247899999999998754321
Q ss_pred ------------CceEEEEEECCC---CCCCcccccccCCCCccEeeecc-----cc--ceeEEEecCCCEEEEEECCCC
Q 003878 324 ------------PVNKVYYCDLSA---LPEGLEGFKKRDGLLPFVKLIDG-----FD--AQYEVIANDDTVFTFLTNKDA 381 (789)
Q Consensus 324 ------------~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~~l~~~-----~~--~~~~~~s~dG~~l~~~tn~~~ 381 (789)
....|+++|+++ +.. .....+... .+ .....|||||+.+++..++..
T Consensus 214 ~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~-----------~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~ 282 (740)
T 4a5s_A 214 VRVPYPKAGAVNPTVKFFVVNTDSLSSVTN-----------ATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQ 282 (740)
T ss_dssp EEEECCBTTSCCCEEEEEEEETTSCCSSSC-----------CCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESST
T ss_pred eeecCCCCcCcCCeeEEEEEECCCCCCCCc-----------ceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCC
Confidence 123688888877 520 011222210 11 112459999998888888776
Q ss_pred CCceEEEEECCCCC------CeEEeccCCCCcee-----eeEEEecCC-EEE-EEEEeCCeEEEEEEECCCCceeeeccc
Q 003878 382 PKYKIIRVDLKEPN------DWFEVIPEAERDVL-----ESATAVNLN-QMI-VSYLSDVKYVLQIRDLKNGSLLHQLPI 448 (789)
Q Consensus 382 ~~~~L~~~dl~~~~------~~~~l~~~~~~~~i-----~~v~~~~~~-~lv-~~~~~~g~~~L~~~dl~tG~~~~~l~~ 448 (789)
....|+++|+++++ ....++.+.....+ ..+.|++|+ .++ +....+|..+|+++++++++. ++|+.
T Consensus 283 ~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~~~-~~lT~ 361 (740)
T 4a5s_A 283 NYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKKDC-TFITK 361 (740)
T ss_dssp TEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCSSC-EESCC
T ss_pred CEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCCce-Eeccc
Confidence 67789999998764 11222222222222 367788864 455 455577889999999986554 67876
Q ss_pred CCeeEEEeecccCCcEEEEEEcC---CCCCcEEEEEECCCC
Q 003878 449 EIGSVNAISARREDSVVFISFTS---FLIPGIVYQCNLKTE 486 (789)
Q Consensus 449 ~~~~v~~~s~s~d~~~l~~~~ss---~~~P~~ly~~dl~tg 486 (789)
....+..+. .+|++.++|..+. -..-..+|++++.++
T Consensus 362 g~~~v~~~~-~~d~~~i~f~~~~~~~~~~~~~ly~v~~~g~ 401 (740)
T 4a5s_A 362 GTWEVIGIE-ALTSDYLYYISNEYKGMPGGRNLYKIQLIDY 401 (740)
T ss_dssp SSSCEEEEE-EECSSEEEEEESCGGGCTTCBEEEEEETTEE
T ss_pred CCEEEEEEE-EEeCCEEEEEEecCCCCCceeEEEEEECCCC
Confidence 655554432 2457888877643 123357888888765
No 120
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=99.58 E-value=3.8e-14 Score=153.91 Aligned_cols=236 Identities=14% Similarity=0.099 Sum_probs=145.2
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCC-----------CCCHHHH---HHHHcCCeEEEEEeecC--CC
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-----------SFSVSRT---ILMRHLGAVFCIANIRG--GG 580 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~-----------~~~~~~~---~~l~~~G~~v~~~~~RG--~g 580 (789)
+| .+|.+...-+.+ ..+.|+||++||..+..... .|..... .++. +||.|+++|+|| .|
T Consensus 29 ~g-~~l~y~~~g~~~---~~~~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~g~~vi~~D~~G~~~G 103 (366)
T 2pl5_A 29 SP-VVIAYETYGTLS---SSKNNAILICHALSGDAHAAGYHSGSDKKPGWWDDYIGPGKSFDT-NQYFIICSNVIGGCKG 103 (366)
T ss_dssp SS-EEEEEEEEECCC---TTSCCEEEEECCSSCCSCCSSBSSTTCSSCCTTTTTEETTSSEET-TTCEEEEECCTTCSSS
T ss_pred cC-ceeeEEeccCcC---CCCCceEEEecccCCcccccccccccccccchHHhhcCCcccccc-cccEEEEecCCCcccC
Confidence 45 566655554332 12458999999987765421 3333211 2334 899999999999 56
Q ss_pred CCChhHHhcc--c---ccCCcchHHHHHHHHHHHHHcCCCCCCcE-EEEeeChHHHHHHHHHHhCCCceeEEEecCCccc
Q 003878 581 EYGEEWHKGG--A---LAKKQNCFDDFISASEYLISAGYTQSRKL-CIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 654 (789)
Q Consensus 581 ~~g~~~~~~~--~---~~~~~~~~~D~~~~~~~L~~~~~~d~~~i-~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d 654 (789)
..+..-.... . ......+++|+.+.+..+++. ...+++ .++|||+||.+++.++.++|++++++|+..|...
T Consensus 104 ~s~~~~~~~~~~~~~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 181 (366)
T 2pl5_A 104 SSGPLSIHPETSTPYGSRFPFVSIQDMVKAQKLLVES--LGIEKLFCVAGGSMGGMQALEWSIAYPNSLSNCIVMASTAE 181 (366)
T ss_dssp SSSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSB
T ss_pred CCCCCCCCCCCCccccCCCCcccHHHHHHHHHHHHHH--cCCceEEEEEEeCccHHHHHHHHHhCcHhhhheeEeccCcc
Confidence 5432100000 0 000134678888877777765 345688 8999999999999999999999999999888654
Q ss_pred ccccc------------c--------c--------------------cCCccchhhcCC---------------------
Q 003878 655 MLRYH------------K--------F--------------------TIGHAWVSDFGC--------------------- 673 (789)
Q Consensus 655 ~~~~~------------~--------~--------------------~~~~~~~~e~g~--------------------- 673 (789)
..... . + .....+...+..
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (366)
T 2pl5_A 182 HSAMQIAFNEVGRQAILSDPNWKNGLYDENSPRKGLALARMVGHITYLSDDKMREKFGRNPPRGNILSTDFAVGSYLIYQ 261 (366)
T ss_dssp CCHHHHHHHHHHHHHHHTSTTCGGGTCSSSCCHHHHHHHHHHHHHTTBCHHHHHHHHTTSCCSSCTTTTTTTSCGGGGST
T ss_pred CCCccchhhHHHHHHHHhCcccccccccccccccchHHHHHhhccccCCHHHHHHHhhhhhhcccccchhhhHHHHHHHH
Confidence 32100 0 0 000000000000
Q ss_pred ------CCcHHH----HHHHHhcCccc------CCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhc
Q 003878 674 ------SEEEEE----FYWLIKYSPLH------NVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLC 737 (789)
Q Consensus 674 ------p~~~~~----~~~l~~~sP~~------~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~ 737 (789)
...+.. +..+..+.... .+.++ ..|+|+++|++|..||+..+.++.+.+...
T Consensus 262 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~P~lii~G~~D~~~~~~~~~~~~~~~~~~-- 329 (366)
T 2pl5_A 262 GESFVDRFDANSYIYVTKALDHYSLGKGKELTAALSNA----------TCRFLVVSYSSDWLYPPAQSREIVKSLEAA-- 329 (366)
T ss_dssp TCCSSSCCCHHHHHHHHHHHHHCBCCSHHHHHHHHTTC----------CSEEEEEEETTCCSSCHHHHHHHHHHHHHT--
T ss_pred HHhhhcccChhHHHHHHhhhhhhccccccchhhhhccC----------CCCEEEEecCCCcccCHHHHHHHHHHhhhc--
Confidence 001111 12222222111 33343 689999999999999999999999999865
Q ss_pred cCCCCCCCCCcEEEEEe-CCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 738 TSLENSPQTNPIIGRIE-RKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 738 ~~~~~~~~~~~~~l~~~-~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
+...+++++ +++||....... .+..+.+.+||.+
T Consensus 330 --------~~~~~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl~~ 364 (366)
T 2pl5_A 330 --------DKRVFYVELQSGEGHDSFLLKN--PKQIEILKGFLEN 364 (366)
T ss_dssp --------TCCEEEEEECCCBSSGGGGSCC--HHHHHHHHHHHHC
T ss_pred --------ccCeEEEEeCCCCCcchhhcCh--hHHHHHHHHHHcc
Confidence 556789999 899998754333 2566677888864
No 121
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=99.57 E-value=5.8e-14 Score=138.46 Aligned_cols=181 Identities=10% Similarity=-0.067 Sum_probs=122.7
Q ss_pred CccEEEEEcCCCCccC-CCCCCHHHHHHHHcC-CeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCC
Q 003878 537 SHPCLLYGYGGFNISV-TPSFSVSRTILMRHL-GAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 614 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~-~~~~~~~~~~~l~~~-G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~ 614 (789)
+.|+||++||..+... ...|.......|.++ ||.|+.+|+||.+. .++...++.+++.-.
T Consensus 3 ~~p~vv~lHG~~~~~~~~~~~~~~~~~~l~~~~g~~vi~~d~~g~~~------------------~~~~~~~~~~~~~l~ 64 (194)
T 2qs9_A 3 SPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT------------------ARESIWLPFMETELH 64 (194)
T ss_dssp CCCEEEEECCSSSSCTTTSTTHHHHHHHHTTSTTCCEEECCCSSTTT------------------CCHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCCcccchHHHHHHHHHhhccCceEEEeeCCCCCc------------------ccHHHHHHHHHHHhC
Confidence 5689999999876643 234444345667646 99999999998421 123344455554421
Q ss_pred CCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhh-cCCCCcHHHHHHHHhcCcccCCC
Q 003878 615 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSD-FGCSEEEEEFYWLIKYSPLHNVR 693 (789)
Q Consensus 615 ~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e-~g~p~~~~~~~~l~~~sP~~~v~ 693 (789)
. .+++.++|+|+||.+++.++.++| ++++|+..|......... ..... +..+.. ++.+.
T Consensus 65 ~-~~~~~lvG~S~Gg~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~--------- 124 (194)
T 2qs9_A 65 C-DEKTIIIGHSSGAIAAMRYAETHR--VYAIVLVSAYTSDLGDEN-----ERASGYFTRPWQ---WEKIK--------- 124 (194)
T ss_dssp C-CTTEEEEEETHHHHHHHHHHHHSC--CSEEEEESCCSSCTTCHH-----HHHTSTTSSCCC---HHHHH---------
T ss_pred c-CCCEEEEEcCcHHHHHHHHHHhCC--CCEEEEEcCCccccchhh-----hHHHhhhccccc---HHHHH---------
Confidence 1 379999999999999999999999 899999888765321110 00011 112211 11111
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHH
Q 003878 694 RPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAA 773 (789)
Q Consensus 694 ~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~ 773 (789)
.. .+|+|+++|++|..||+.++.++.+.+ .. ++.+++++||...... -+.++
T Consensus 125 ~~----------~~p~lii~G~~D~~vp~~~~~~~~~~~-~~--------------~~~~~~~~gH~~~~~~---p~~~~ 176 (194)
T 2qs9_A 125 AN----------CPYIVQFGSTDDPFLPWKEQQEVADRL-ET--------------KLHKFTDCGHFQNTEF---HELIT 176 (194)
T ss_dssp HH----------CSEEEEEEETTCSSSCHHHHHHHHHHH-TC--------------EEEEESSCTTSCSSCC---HHHHH
T ss_pred hh----------CCCEEEEEeCCCCcCCHHHHHHHHHhc-CC--------------eEEEeCCCCCccchhC---HHHHH
Confidence 12 579999999999999999999988887 43 7889999999976433 34566
Q ss_pred HHHHHHHHHh
Q 003878 774 DRYGFMAKML 783 (789)
Q Consensus 774 ~~~~fl~~~l 783 (789)
.+++||.+..
T Consensus 177 ~~~~fl~~~~ 186 (194)
T 2qs9_A 177 VVKSLLKVPA 186 (194)
T ss_dssp HHHHHHTCCC
T ss_pred HHHHHHHhhh
Confidence 7789997654
No 122
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=99.57 E-value=5e-14 Score=144.69 Aligned_cols=212 Identities=15% Similarity=0.049 Sum_probs=136.2
Q ss_pred EEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhccc
Q 003878 512 FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGA 591 (789)
Q Consensus 512 ~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~ 591 (789)
.+...|| .+|.+...- +.|.||++||..+.... |. .....|. +||.|+.+|+||.|.....
T Consensus 6 ~~~~~~g-~~l~~~~~g--------~~~~vv~lHG~~~~~~~--~~-~~~~~l~-~~~~vi~~d~~G~G~S~~~------ 66 (262)
T 3r0v_A 6 TVPSSDG-TPIAFERSG--------SGPPVVLVGGALSTRAG--GA-PLAERLA-PHFTVICYDRRGRGDSGDT------ 66 (262)
T ss_dssp EEECTTS-CEEEEEEEE--------CSSEEEEECCTTCCGGG--GH-HHHHHHT-TTSEEEEECCTTSTTCCCC------
T ss_pred eEEcCCC-cEEEEEEcC--------CCCcEEEECCCCcChHH--HH-HHHHHHh-cCcEEEEEecCCCcCCCCC------
Confidence 3566789 888765432 24789999998765432 33 3456677 8999999999998764321
Q ss_pred ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccccc---------
Q 003878 592 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFT--------- 662 (789)
Q Consensus 592 ~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~--------- 662 (789)
...+++|+.+.+..+++. .+ +++.++|+|+||.+++.++.++| +++++|+..|...........
T Consensus 67 ---~~~~~~~~~~~~~~~~~~--l~-~~~~l~G~S~Gg~ia~~~a~~~p-~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 139 (262)
T 3r0v_A 67 ---PPYAVEREIEDLAAIIDA--AG-GAAFVFGMSSGAGLSLLAAASGL-PITRLAVFEPPYAVDDSRPPVPPDYQTRLD 139 (262)
T ss_dssp ---SSCCHHHHHHHHHHHHHH--TT-SCEEEEEETHHHHHHHHHHHTTC-CEEEEEEECCCCCCSTTSCCCCTTHHHHHH
T ss_pred ---CCCCHHHHHHHHHHHHHh--cC-CCeEEEEEcHHHHHHHHHHHhCC-CcceEEEEcCCcccccccchhhhHHHHHHH
Confidence 134566776666666655 23 69999999999999999999999 999999988866543211000
Q ss_pred ----C------Cccchhh-cCCCCcHHHHHHHHhc------------------------CcccCCCCCCCCCCCCCCCCC
Q 003878 663 ----I------GHAWVSD-FGCSEEEEEFYWLIKY------------------------SPLHNVRRPWEQNPDKPFQYP 707 (789)
Q Consensus 663 ----~------~~~~~~e-~g~p~~~~~~~~l~~~------------------------sP~~~v~~~~~~~~~~~~~~p 707 (789)
. ...+... .+.+ ++..+.+... .+...+.++ ..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~ 207 (262)
T 3r0v_A 140 ALLAEGRRGDAVTYFMTEGVGVP--PDLVAQMQQAPMWPGMEAVAHTLPYDHAVMGDNTIPTARFASI----------SI 207 (262)
T ss_dssp HHHHTTCHHHHHHHHHHHTSCCC--HHHHHHHHTSTTHHHHHHTGGGHHHHHHHHTTSCCCHHHHTTC----------CS
T ss_pred HHhhccchhhHHHHHhhcccCCC--HHHHHHHHhhhcccchHHHHhhhhhhhhhhhcCCCCHHHcCcC----------CC
Confidence 0 0001111 1111 1111111110 112223333 67
Q ss_pred eEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 708 STLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 708 p~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
|+|+++|++|..+|+..+.++.+.+.. .++.+++++||.. . ..+..+.+.+||.
T Consensus 208 P~lii~G~~D~~~~~~~~~~~~~~~~~--------------~~~~~~~~~gH~~---~--p~~~~~~i~~fl~ 261 (262)
T 3r0v_A 208 PTLVMDGGASPAWIRHTAQELADTIPN--------------ARYVTLENQTHTV---A--PDAIAPVLVEFFT 261 (262)
T ss_dssp CEEEEECTTCCHHHHHHHHHHHHHSTT--------------EEEEECCCSSSSC---C--HHHHHHHHHHHHC
T ss_pred CEEEEeecCCCCCCHHHHHHHHHhCCC--------------CeEEEecCCCccc---C--HHHHHHHHHHHHh
Confidence 999999999999998888777766532 4789999999942 1 2345567777774
No 123
>3guu_A Lipase A; protein structure, hydrolase; HET: 1PE; 2.10A {Candida antarctica} PDB: 2veo_A*
Probab=99.56 E-value=9.4e-14 Score=154.01 Aligned_cols=249 Identities=12% Similarity=-0.023 Sum_probs=154.5
Q ss_pred CCcEEEEEEecCC--C-ceEEEEEEEecCCCCCCCCccEEEEEcCCCCccC--CCC----------------CC-HHHHH
Q 003878 505 EFHVHQVFVPSKD--G-STKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV--TPS----------------FS-VSRTI 562 (789)
Q Consensus 505 ~~~~~~~~~~s~d--g-~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~--~~~----------------~~-~~~~~ 562 (789)
.....++.|.+.| | ++.+.+.++.|++. .++.|+|.|.||-.+... .|+ +. .....
T Consensus 72 ~~~a~ri~Y~std~~G~p~~~~gtv~~P~~~--~~~~pvvs~~hgt~g~~~~CaPS~~~~~~~~~~~~~~~~~e~~~~~~ 149 (462)
T 3guu_A 72 NAASFQLQYRTTNTQNEAVADVATVWIPAKP--ASPPKIFSYQVYEDATALDCAPSYSYLTGLDQPNKVTAVLDTPIIIG 149 (462)
T ss_dssp TCEEEEEEEEEECTTSCEEEEEEEEEECSSC--CSSCEEEEEECCCCCCSGGGCHHHHHBSCSCCTTGGGGSTHHHHHHH
T ss_pred CceEEEEEEEEECCCCCEEEEEEEEEecCCC--CCCCcEEEEeCCcccCCCCcCCccccccCCCccccchhhhhHHHHHH
Confidence 4467778777764 4 23477889999874 345899999999755321 111 11 12345
Q ss_pred H-HHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC--
Q 003878 563 L-MRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-- 639 (789)
Q Consensus 563 ~-l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-- 639 (789)
+ ++ +||+|+++|++|.|. .|... ... .....|.+.++..+. +.....+++++|+|+||..+++++...
T Consensus 150 ~~l~-~G~~Vv~~Dy~G~G~---~y~~~-~~~--~~~vlD~vrAa~~~~--~~~~~~~v~l~G~S~GG~aal~aa~~~~~ 220 (462)
T 3guu_A 150 WALQ-QGYYVVSSDHEGFKA---AFIAG-YEE--GMAILDGIRALKNYQ--NLPSDSKVALEGYSGGAHATVWATSLAES 220 (462)
T ss_dssp HHHH-TTCEEEEECTTTTTT---CTTCH-HHH--HHHHHHHHHHHHHHT--TCCTTCEEEEEEETHHHHHHHHHHHHHHH
T ss_pred HHHh-CCCEEEEecCCCCCC---cccCC-cch--hHHHHHHHHHHHHhc--cCCCCCCEEEEeeCccHHHHHHHHHhChh
Confidence 5 55 999999999999774 22111 000 112334444444443 333357999999999999999887754
Q ss_pred --CC-ceeEEEecCCcccccccccccCCcc---------------------chhhcCCC---------------------
Q 003878 640 --PD-LFGCALAHVGVMDMLRYHKFTIGHA---------------------WVSDFGCS--------------------- 674 (789)
Q Consensus 640 --pd-~f~a~v~~~p~~d~~~~~~~~~~~~---------------------~~~e~g~p--------------------- 674 (789)
|+ .++++++..+..|+........+.. +..++-+|
T Consensus 221 yapel~~~g~~~~~~p~dl~~~~~~~~~~~~~g~~~~~l~Gl~~~yP~l~~~l~~~lt~~g~~~~~~~~~~~~C~~~~~~ 300 (462)
T 3guu_A 221 YAPELNIVGASHGGTPVSAKDTFTFLNGGPFAGFALAGVSGLSLAHPDMESFIEARLNAKGQRTLKQIRGRGFCLPQVVL 300 (462)
T ss_dssp HCTTSEEEEEEEESCCCBHHHHHHHHTTSTTHHHHHHHHHHHHHHCHHHHHHHHTTBCHHHHHHHHHHTSTTCCHHHHHH
T ss_pred hcCccceEEEEEecCCCCHHHHHHHhccchhHHHHHHHHHhHHhhCcchhHHHHHHhCHHHHHHHHHHHhcCcchHHHHH
Confidence 44 5888888888777643321000000 00111111
Q ss_pred -----------------CcHHHHHHHHhcCccc-CCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhh
Q 003878 675 -----------------EEEEEFYWLIKYSPLH-NVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVL 736 (789)
Q Consensus 675 -----------------~~~~~~~~l~~~sP~~-~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 736 (789)
.++...+.+.+.+.-. .... .......|+||+||.+|.+||+.++.++++++++.
T Consensus 301 ~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~lg~~~~~~------g~~~~~~PvlI~hG~~D~vVP~~~s~~l~~~l~~~- 373 (462)
T 3guu_A 301 TYPFLNVFSLVNDTNLLNEAPIASILKQETVVQAEASY------TVSVPKFPRFIWHAIPDEIVPYQPAATYVKEQCAK- 373 (462)
T ss_dssp HCTTCCGGGGBSCTTGGGSTTHHHHHHHSBCCTTTCSS------CCCCCCSEEEEEEETTCSSSCHHHHHHHHHHHHHT-
T ss_pred hhccCCHHHHcCCCccccCHHHHHHHHhhccccccccc------CCCCCCCCEEEEeCCCCCcCCHHHHHHHHHHHHHc-
Confidence 1111112222211100 0000 01124679999999999999999999999999988
Q ss_pred ccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 737 CTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 737 ~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
|.++++++|++++|+... .....++++||.+++..
T Consensus 374 ---------G~~V~~~~y~~~~H~~~~-----~~~~~d~l~WL~~r~~G 408 (462)
T 3guu_A 374 ---------GANINFSPYPIAEHLTAE-----IFGLVPSLWFIKQAFDG 408 (462)
T ss_dssp ---------TCEEEEEEESSCCHHHHH-----HHTHHHHHHHHHHHHHT
T ss_pred ---------CCCeEEEEECcCCccCch-----hhhHHHHHHHHHHHhCC
Confidence 889999999999998642 23467889999998754
No 124
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.56 E-value=5.2e-14 Score=154.16 Aligned_cols=313 Identities=11% Similarity=0.022 Sum_probs=185.1
Q ss_pred CceEeCCEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEE
Q 003878 85 APFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMR 164 (789)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~d 164 (789)
...++|.+++|.....+.. .||+.+..+++.+.|..... .....+.|||||++|||+.... +|+++|
T Consensus 42 ~~SpdG~~l~~~~~~~g~~--~l~~~d~~~~~~~~l~~~~~------~~~~~~~~spdg~~l~~~~~~~-----~l~~~d 108 (396)
T 3c5m_A 42 CFTQDGKKLLFAGDFDGNR--NYYLLNLETQQAVQLTEGKG------DNTFGGFISTDERAFFYVKNEL-----NLMKVD 108 (396)
T ss_dssp CBCTTSCEEEEEECTTSSC--EEEEEETTTTEEEECCCSSC------BCTTTCEECTTSSEEEEEETTT-----EEEEEE
T ss_pred cCCCCCCEEEEEEecCCCc--eEEEEECCCCcEEEeecCCC------CccccceECCCCCEEEEEEcCC-----cEEEEE
Confidence 3456899999988764443 47887755555444433221 1112367999999999987532 699999
Q ss_pred cCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeecccccceEEEEe
Q 003878 165 IEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTH 244 (789)
Q Consensus 165 l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wsp 244 (789)
+.+++.... ... ...+.|+++ .++|.+. .+...+|. ..+.|+|
T Consensus 109 ~~~~~~~~~--~~~----------------~~~~~~~g~-----------~l~~~~~-~~~~~~~~-------~~~~~sp 151 (396)
T 3c5m_A 109 LETLEEQVI--YTV----------------DEEWKGYGT-----------WVANSDC-TKLVGIEI-------LKRDWQP 151 (396)
T ss_dssp TTTCCEEEE--EEC----------------CTTEEEEEE-----------EEECTTS-SEEEEEEE-------EGGGCCC
T ss_pred CCCCCcEEE--Eec----------------ccccCCCCC-----------EEEeccC-Cccccccc-------cccccCC
Confidence 999865421 111 001223332 2333322 22223332 2356778
Q ss_pred CCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEec-CCcEEEEEEEcCCC
Q 003878 245 DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCD 323 (789)
Q Consensus 245 Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~ 323 (789)
||+.+++..... ......|+++++.++.. ..+.... ..+..+.||| ||++|++.......
T Consensus 152 dg~~~~~~~~~~--------------~~~~~~l~~~d~~~g~~--~~~~~~~---~~~~~~~~sp~dg~~l~~~~~~~~~ 212 (396)
T 3c5m_A 152 LTSWEKFAEFYH--------------TNPTCRLIKVDIETGEL--EVIHQDT---AWLGHPIYRPFDDSTVGFCHEGPHD 212 (396)
T ss_dssp CCSHHHHHHHHH--------------TCCCEEEEEEETTTCCE--EEEEEES---SCEEEEEEETTEEEEEEEEECSCSS
T ss_pred CCcceeeeeecc--------------CCCcceEEEEECCCCcE--EeeccCC---cccccceECCCCCCEEEEEecCCCC
Confidence 887776543100 12345699999876543 2333322 2355789999 89999888642211
Q ss_pred -CceEEEEEECCCCCCCcccccccCCCCccEeeecc---ccceeEEEecCCCEEEEEECCCC-CCceEEEEECCCCCCeE
Q 003878 324 -PVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG---FDAQYEVIANDDTVFTFLTNKDA-PKYKIIRVDLKEPNDWF 398 (789)
Q Consensus 324 -~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~---~~~~~~~~s~dG~~l~~~tn~~~-~~~~L~~~dl~~~~~~~ 398 (789)
...+||+++++++. ...+... .......|+|||+.|++.++..+ ....|+++|+++++ .+
T Consensus 213 ~~~~~l~~~d~~~~~--------------~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~-~~ 277 (396)
T 3c5m_A 213 LVDARMWLVNEDGSN--------------VRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE-NE 277 (396)
T ss_dssp SCSCCCEEEETTSCC--------------CEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC-EE
T ss_pred CCCceEEEEECCCCc--------------eeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC-eE
Confidence 12579999987642 1222221 11223469999999988876532 22459999998876 44
Q ss_pred EeccCCCCceeeeEEEec-CCEEEEEEEe--------------CCeEEEEEEECCCCceeeecccCCe-----------e
Q 003878 399 EVIPEAERDVLESATAVN-LNQMIVSYLS--------------DVKYVLQIRDLKNGSLLHQLPIEIG-----------S 452 (789)
Q Consensus 399 ~l~~~~~~~~i~~v~~~~-~~~lv~~~~~--------------~g~~~L~~~dl~tG~~~~~l~~~~~-----------~ 452 (789)
.+.... . .. +.+++ ++.+++.... ++...|+++|+++|+. +.++.... .
T Consensus 278 ~l~~~~-~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~~~~~~ 352 (396)
T 3c5m_A 278 EVMVMP-P--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHSTSWDVLDGDRQIT 352 (396)
T ss_dssp EEEECC-S--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-CEEEECCCCCCCBTTBSSTT
T ss_pred EeeeCC-C--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-EEccCCCCccccccccccCC
Confidence 443222 1 22 66776 6666655332 2346899999987765 45543322 1
Q ss_pred EEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 453 VNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 453 v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
...+.+++|++.+++..+. ..+..+|.+++.+++
T Consensus 353 ~~~~~~s~dg~~l~~~s~~-~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 353 HPHPSFTPNDDGVLFTSDF-EGVPAIYIADVPESY 386 (396)
T ss_dssp CCCCEECTTSSEEEEEECT-TSSCEEEEEECCTTC
T ss_pred CCCceEccCCCeEEEEecC-CCCceEEEEEEcccc
Confidence 2345788999988876544 456789999998874
No 125
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog, hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas fluorescens} SCOP: c.69.1.12 PDB: 1va4_A 3t52_A* 3t4u_A* 3hi4_A 3hea_A
Probab=99.56 E-value=6.3e-14 Score=145.51 Aligned_cols=221 Identities=18% Similarity=0.141 Sum_probs=129.2
Q ss_pred EecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccc
Q 003878 513 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 592 (789)
Q Consensus 513 ~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~ 592 (789)
++..|| .+|.+... ++.|.||++||..+... .|... ...|.++||.|+++|+||.|.....
T Consensus 3 ~~~~~g-~~l~y~~~--------G~g~~vvllHG~~~~~~--~w~~~-~~~l~~~g~~vi~~D~~G~G~S~~~------- 63 (271)
T 3ia2_A 3 FVAKDG-TQIYFKDW--------GSGKPVLFSHGWLLDAD--MWEYQ-MEYLSSRGYRTIAFDRRGFGRSDQP------- 63 (271)
T ss_dssp EECTTS-CEEEEEEE--------SSSSEEEEECCTTCCGG--GGHHH-HHHHHTTTCEEEEECCTTSTTSCCC-------
T ss_pred EEcCCC-CEEEEEcc--------CCCCeEEEECCCCCcHH--HHHHH-HHHHHhCCceEEEecCCCCccCCCC-------
Confidence 567899 88865543 23356889999766543 34443 3445558999999999998864321
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHh-CCCceeEEEecCCccccccccc---ccCCc---
Q 003878 593 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ-RPDLFGCALAHVGVMDMLRYHK---FTIGH--- 665 (789)
Q Consensus 593 ~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~-~pd~f~a~v~~~p~~d~~~~~~---~~~~~--- 665 (789)
....+++++.+.+..+++. .+.+++.++|||+||.+++.++.+ .|++++++|+..+......... .....
T Consensus 64 -~~~~~~~~~a~d~~~~l~~--l~~~~~~lvGhS~GG~~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 140 (271)
T 3ia2_A 64 -WTGNDYDTFADDIAQLIEH--LDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKPDYPQGVPLDVF 140 (271)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--HTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSBCBCBTTBTTSBCHHHH
T ss_pred -CCCCCHHHHHHHHHHHHHH--hCCCCceEEEEcccHHHHHHHHHHhCCcccceEEEEccCCccccCCCCCcccccHHHH
Confidence 1223455555544444443 234689999999999866665554 5999999998765432211000 00000
Q ss_pred ------------cchh-----hc----CCCCcHH----------------HHHHHHhc---CcccCCCCCCCCCCCCCCC
Q 003878 666 ------------AWVS-----DF----GCSEEEE----------------EFYWLIKY---SPLHNVRRPWEQNPDKPFQ 705 (789)
Q Consensus 666 ------------~~~~-----e~----g~p~~~~----------------~~~~l~~~---sP~~~v~~~~~~~~~~~~~ 705 (789)
.+.. .+ +....+. .+..+..+ +....+.++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---------- 210 (271)
T 3ia2_A 141 ARFKTELLKDRAQFISDFNAPFYGINKGQVVSQGVQTQTLQIALLASLKATVDCVTAFAETDFRPDMAKI---------- 210 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTGGGTCCCCHHHHHHHHHHHHHSCHHHHHHHHHHHHHCBCHHHHTTC----------
T ss_pred HHHHHHHHhhHHHHHHHhhHhhhccccccccCHHHHHHHHhhhhhccHHHHHHHHHHhhccCCcccccCC----------
Confidence 0000 00 0000110 00111111 111122333
Q ss_pred CCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 706 YPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 706 ~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
..|+|+++|++|..||+..+.++.+++.. ..++.+++++||....... .+..+.+.+||.
T Consensus 211 ~~P~Lvi~G~~D~~~p~~~~~~~~~~~~~-------------~~~~~~~~~~gH~~~~e~p--~~~~~~i~~Fl~ 270 (271)
T 3ia2_A 211 DVPTLVIHGDGDQIVPFETTGKVAAELIK-------------GAELKVYKDAPHGFAVTHA--QQLNEDLLAFLK 270 (271)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHST-------------TCEEEEETTCCTTHHHHTH--HHHHHHHHHHHT
T ss_pred CCCEEEEEeCCCCcCChHHHHHHHHHhCC-------------CceEEEEcCCCCcccccCH--HHHHHHHHHHhh
Confidence 68999999999999999886666554422 2478999999998743322 356667788874
No 126
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=99.56 E-value=3.1e-14 Score=149.80 Aligned_cols=222 Identities=12% Similarity=0.019 Sum_probs=137.9
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCc
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 596 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~ 596 (789)
+| .+|.+... ++.|+||++||..+.... |......++. +||.|+++|+||.|.... ....
T Consensus 17 ~g-~~l~~~~~--------g~~~~vv~~HG~~~~~~~--~~~~~~~l~~-~g~~v~~~d~~G~G~S~~--------~~~~ 76 (309)
T 3u1t_A 17 EG-ATIAYVDE--------GSGQPVLFLHGNPTSSYL--WRNIIPYVVA-AGYRAVAPDLIGMGDSAK--------PDIE 76 (309)
T ss_dssp TT-EEEEEEEE--------ECSSEEEEECCTTCCGGG--GTTTHHHHHH-TTCEEEEECCTTSTTSCC--------CSSC
T ss_pred CC-eEEEEEEc--------CCCCEEEEECCCcchhhh--HHHHHHHHHh-CCCEEEEEccCCCCCCCC--------CCcc
Confidence 78 77765543 235789999998765443 4433444566 899999999999875432 1124
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc---------------c
Q 003878 597 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK---------------F 661 (789)
Q Consensus 597 ~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~---------------~ 661 (789)
.+++|+.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..|......... .
T Consensus 77 ~~~~~~~~~~~~~~~~--~~~~~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (309)
T 3u1t_A 77 YRLQDHVAYMDGFIDA--LGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSYEAMGPQLGPLFRDL 154 (309)
T ss_dssp CCHHHHHHHHHHHHHH--HTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEESCTTTCSBSCSGGGHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHH--cCCCceEEEEeCcHHHHHHHHHHhChHhheEEEEeccCCCCccccccccccchhhhHHHHHH
Confidence 5667777766666654 2346899999999999999999999999999999887554320000 0
Q ss_pred cC----------Cccch----hh--cCCCCcHHHHHHHHh-----------------cCcc--------------cCCCC
Q 003878 662 TI----------GHAWV----SD--FGCSEEEEEFYWLIK-----------------YSPL--------------HNVRR 694 (789)
Q Consensus 662 ~~----------~~~~~----~e--~g~p~~~~~~~~l~~-----------------~sP~--------------~~v~~ 694 (789)
.. ...+. .. ......++..+.+.. .... ..+.+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 234 (309)
T 3u1t_A 155 RTADVGEKMVLDGNFFVETILPEMGVVRSLSEAEMAAYRAPFPTRQSRLPTLQWPREVPIGGEPAFAEAEVLKNGEWLMA 234 (309)
T ss_dssp TSTTHHHHHHTTTCHHHHTHHHHTSCSSCCCHHHHHHHHTTCCSTGGGHHHHHHHHHSCBTTBSHHHHHHHHHHHHHHHH
T ss_pred hccchhhhhccccceehhhhcccccccccCCHHHHHHHHHhcCCccccchHHHHHHHhccccccchhhhhhhhhhhhccc
Confidence 00 00000 00 001111111111111 1000 00112
Q ss_pred CCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHH
Q 003878 695 PWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAAD 774 (789)
Q Consensus 695 ~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~ 774 (789)
+ ..|+|+++|++|..+|+..+.++.+.+.. ..+.+++++||...... ..+..+.
T Consensus 235 i----------~~P~l~i~G~~D~~~~~~~~~~~~~~~~~--------------~~~~~~~~~gH~~~~~~--p~~~~~~ 288 (309)
T 3u1t_A 235 S----------PIPKLLFHAEPGALAPKPVVDYLSENVPN--------------LEVRFVGAGTHFLQEDH--PHLIGQG 288 (309)
T ss_dssp C----------CSCEEEEEEEECSSSCHHHHHHHHHHSTT--------------EEEEEEEEESSCHHHHC--HHHHHHH
T ss_pred C----------CCCEEEEecCCCCCCCHHHHHHHHhhCCC--------------CEEEEecCCcccchhhC--HHHHHHH
Confidence 2 57999999999999999888787776543 25566689999754322 2356677
Q ss_pred HHHHHHHHhCCC
Q 003878 775 RYGFMAKMLGAS 786 (789)
Q Consensus 775 ~~~fl~~~l~~~ 786 (789)
+.+||.+..+..
T Consensus 289 i~~fl~~~~~~~ 300 (309)
T 3u1t_A 289 IADWLRRNKPHA 300 (309)
T ss_dssp HHHHHHHHCCCC
T ss_pred HHHHHHhcchhh
Confidence 899999886543
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.56 E-value=9e-12 Score=136.35 Aligned_cols=320 Identities=12% Similarity=0.039 Sum_probs=194.1
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccccee
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFF 213 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 213 (789)
+..+++||||++|+++....| +|++||+++++.+.. +... +-..+..+.|+++
T Consensus 34 ~~~~~~s~dg~~l~~~~~~d~----~i~v~d~~~~~~~~~-~~~~------------~~v~~~~~spdg~---------- 86 (391)
T 1l0q_A 34 PMGAVISPDGTKVYVANAHSN----DVSIIDTATNNVIAT-VPAG------------SSPQGVAVSPDGK---------- 86 (391)
T ss_dssp EEEEEECTTSSEEEEEEGGGT----EEEEEETTTTEEEEE-EECS------------SSEEEEEECTTSS----------
T ss_pred cceEEECCCCCEEEEECCCCC----eEEEEECCCCeEEEE-EECC------------CCccceEECCCCC----------
Confidence 578899999999877654333 799999999976531 1110 0012233446664
Q ss_pred eEEEeeeccccceeeeeeec---------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC
Q 003878 214 FFYLFSLVKSTIYSFWSVVS---------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT 284 (789)
Q Consensus 214 ~~~~~~s~~~g~~~l~~~~~---------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~ 284 (789)
.+++.+..++...+|.+.. .....+++|+|||+.|+++.. ....|+++++.+
T Consensus 87 -~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------------------~~~~v~~~d~~~ 147 (391)
T 1l0q_A 87 -QVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPDGKKLYVTNN------------------GDKTVSVINTVT 147 (391)
T ss_dssp -EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET------------------TTTEEEEEETTT
T ss_pred -EEEEEECCCCEEEEEECCCCeEEEEEeCCCCcceEEECCCCCEEEEEeC------------------CCCEEEEEECCC
Confidence 3444455667777776543 222367899999999988743 234699999876
Q ss_pred CCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeE
Q 003878 285 KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYE 364 (789)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 364 (789)
+.. ...+.... ....+.|+|||++|++.... ...|+++|+.++. ....+.........
T Consensus 148 ~~~--~~~~~~~~---~~~~~~~~~dg~~l~~~~~~----~~~v~~~d~~~~~-------------~~~~~~~~~~~~~~ 205 (391)
T 1l0q_A 148 KAV--INTVSVGR---SPKGIAVTPDGTKVYVANFD----SMSISVIDTVTNS-------------VIDTVKVEAAPSGI 205 (391)
T ss_dssp TEE--EEEEECCS---SEEEEEECTTSSEEEEEETT----TTEEEEEETTTTE-------------EEEEEECSSEEEEE
T ss_pred CcE--EEEEecCC---CcceEEECCCCCEEEEEeCC----CCEEEEEECCCCe-------------EEEEEecCCCccce
Confidence 532 22333222 23578999999999776532 3569999998742 11111111111223
Q ss_pred EEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCeEEEEEEECCCCcee
Q 003878 365 VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLL 443 (789)
Q Consensus 365 ~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~~~L~~~dl~tG~~~ 443 (789)
.|+|+|+.+++.... ..+..|..+|+.+++ ....++.. ..+..+.+++++ .+++....++ .|++||+.+|+..
T Consensus 206 ~~~~~g~~l~~~~~~-~~~~~v~~~d~~~~~-~~~~~~~~--~~~~~~~~s~dg~~l~~s~~~d~--~v~v~d~~~~~~~ 279 (391)
T 1l0q_A 206 AVNPEGTKAYVTNVD-KYFNTVSMIDTGTNK-ITARIPVG--PDPAGIAVTPDGKKVYVALSFXN--TVSVIDTATNTIT 279 (391)
T ss_dssp EECTTSSEEEEEEEC-SSCCEEEEEETTTTE-EEEEEECC--SSEEEEEECTTSSEEEEEETTTT--EEEEEETTTTEEE
T ss_pred EECCCCCEEEEEecC-cCCCcEEEEECCCCe-EEEEEecC--CCccEEEEccCCCEEEEEcCCCC--EEEEEECCCCcEE
Confidence 489999998877642 245789999998875 33333333 235678888754 4656665565 7999999988765
Q ss_pred eecccCCee------EEE-----------eecccCCcEEE----EEEcCCCCCcEEEEEECCCCCceEEEeeeccCCCCC
Q 003878 444 HQLPIEIGS------VNA-----------ISARREDSVVF----ISFTSFLIPGIVYQCNLKTETPEMKIFRETIIPGFD 502 (789)
Q Consensus 444 ~~l~~~~~~------v~~-----------~s~s~d~~~l~----~~~ss~~~P~~ly~~dl~tg~~~~~~l~~~~~~~~~ 502 (789)
..+...... +.. ++......... +.+.+.......+.|++.+|. ......+ ...|.
T Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~--~~~~~~~-~~~~~ 356 (391)
T 1l0q_A 280 ATMAVGKNPYASGQFIGSIPVQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGS--SSKKQNP-THTYS 356 (391)
T ss_dssp EEEECSSSEECCSSCEEECSSCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSC--EECSSSC-EECCS
T ss_pred EEEECCcCCCccceeeecccccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCc--ccCcCCC-eEEeC
Confidence 555432111 110 11111111110 223455567789999998884 3222211 12466
Q ss_pred CCCCcEEEEEEecCCCce--EEEEEEEecCC
Q 003878 503 RSEFHVHQVFVPSKDGST--KIPMFIVSKKN 531 (789)
Q Consensus 503 ~~~~~~~~~~~~s~dg~~--~i~~~l~~p~~ 531 (789)
+...-...+++++.+| . +++...+++++
T Consensus 357 ~~g~y~~~~~~~~~~g-~~~~~~~~~v~~~~ 386 (391)
T 1l0q_A 357 ETGIYTVRLTVSNSNG-TDSQISTVNVVLKG 386 (391)
T ss_dssp SCEEEEEEEEEEETTE-EEEEEEEEEEECTT
T ss_pred CCceEEEEEEEECCCC-cEEEEEEEEEEcCC
Confidence 6666667788888998 5 68888888765
No 128
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase BPO-A2 and matrix...; protein design, bionanotechnology; 3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Probab=99.56 E-value=2.7e-13 Score=152.74 Aligned_cols=229 Identities=13% Similarity=0.057 Sum_probs=138.9
Q ss_pred EEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHh
Q 003878 509 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK 588 (789)
Q Consensus 509 ~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~ 588 (789)
..+.+.+.|| .+|.+... +..|+||++||+.+.... |... ...|.++||.|+++|+||.|....
T Consensus 4 i~~~~~~~dG-~~l~y~~~--------G~gp~VV~lHG~~~~~~~--~~~l-~~~La~~Gy~Vi~~D~rG~G~S~~---- 67 (456)
T 3vdx_A 4 ITVGQENSTS-IDLYYEDH--------GTGVPVVLIHGFPLSGHS--WERQ-SAALLDAGYRVITYDRRGFGQSSQ---- 67 (456)
T ss_dssp EEEEEETTEE-EEEEEEEE--------SSSEEEEEECCTTCCGGG--GTTH-HHHHHHHTEEEEEECCTTSTTSCC----
T ss_pred EeecccccCC-eEEEEEEe--------CCCCEEEEECCCCCcHHH--HHHH-HHHHHHCCcEEEEECCCCCCCCCC----
Confidence 3455667788 77764322 245899999998765433 4433 344544899999999999876432
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCceeEEEecCCcccccccccccC-Cc-
Q 003878 589 GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGVMDMLRYHKFTI-GH- 665 (789)
Q Consensus 589 ~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-pd~f~a~v~~~p~~d~~~~~~~~~-~~- 665 (789)
.....+++++.+.+..+++. .+.++++++|+|+||.+++.++.++ |++++++|+..|............ +.
T Consensus 68 ----~~~~~s~~~~a~dl~~~l~~--l~~~~v~LvGhS~GG~ia~~~aa~~~p~~v~~lVli~~~~~~~~~~~~~~~~~~ 141 (456)
T 3vdx_A 68 ----PTTGYDYDTFAADLNTVLET--LDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTDDNPDGAA 141 (456)
T ss_dssp ----CSSCCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGGHHHHHHHHHHCSSSEEEEEEESCCCSCCBCCSSCCSCSB
T ss_pred ----CCCCCCHHHHHHHHHHHHHH--hCCCCeEEEEECHHHHHHHHHHHhcchhheeEEEEeCCcccccccccccccccc
Confidence 11233455555555444443 2456899999999999888887776 999999999988765322110000 00
Q ss_pred -----------------cc----hhh-cCC------CCcHHHHHHHH----------------hc--CcccCCCCCCCCC
Q 003878 666 -----------------AW----VSD-FGC------SEEEEEFYWLI----------------KY--SPLHNVRRPWEQN 699 (789)
Q Consensus 666 -----------------~~----~~e-~g~------p~~~~~~~~l~----------------~~--sP~~~v~~~~~~~ 699 (789)
.+ ... +.. ...++...... .+ +....+..+
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i---- 217 (456)
T 3vdx_A 142 PQEFFDGIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPRI---- 217 (456)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHTTTTTSBTTTBCHHHHHHHHHHHHTSCTTHHHHGGGGTTCCCTTTSTTC----
T ss_pred hHHHHHHHHHhhhccchHHHHHHHHHHhcccccccccccHHHHHHHhhhccccchhhhhhhhhhhhhhHHHHhhhC----
Confidence 00 000 010 11111111110 00 111222332
Q ss_pred CCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHH
Q 003878 700 PDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 779 (789)
Q Consensus 700 ~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl 779 (789)
..|+|+++|.+|..||+.+..+.++++ ...+++.+++++||....... ....+.+.+||
T Consensus 218 ------~~PvLiI~G~~D~~vp~~~~~~~l~~~-------------~~~~~~~~i~gagH~~~~e~p--~~v~~~I~~FL 276 (456)
T 3vdx_A 218 ------DVPALILHGTGDRTLPIENTARVFHKA-------------LPSAEYVEVEGAPHGLLWTHA--EEVNTALLAFL 276 (456)
T ss_dssp ------CSCCEEEEETTCSSSCGGGTHHHHHHH-------------CTTSEEEEETTCCSCTTTTTH--HHHHHHHHHHH
T ss_pred ------CCCEEEEEeCCCCCcCHHHHHHHHHHH-------------CCCceEEEeCCCCCcchhhCH--HHHHHHHHHHH
Confidence 689999999999999998444443332 123478999999998765333 46677888999
Q ss_pred HHHhC
Q 003878 780 AKMLG 784 (789)
Q Consensus 780 ~~~l~ 784 (789)
.+.++
T Consensus 277 ~~~l~ 281 (456)
T 3vdx_A 277 AKALE 281 (456)
T ss_dssp HHHHH
T ss_pred HHhhc
Confidence 88763
No 129
>1qlw_A Esterase; anisotropic refinement, atomic resolution, alpha/beta hydrolase; 1.09A {Alcaligenes SP} SCOP: c.69.1.15 PDB: 2wkw_A*
Probab=99.56 E-value=6.6e-14 Score=150.68 Aligned_cols=206 Identities=8% Similarity=-0.043 Sum_probs=137.2
Q ss_pred eEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCC----CHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcc-----
Q 003878 520 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSF----SVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG----- 590 (789)
Q Consensus 520 ~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~----~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~----- 590 (789)
..+.+.++.|.+ .+.|.||++||+......... ...+...|.++||.|+++|+||.|..+..-....
T Consensus 48 ~~~~~~~~~p~~----~~~~~vvl~HG~g~~~~~~~~~pdg~~~~~~~l~~~G~~V~~~D~~G~G~S~~~~~~~~~~~~~ 123 (328)
T 1qlw_A 48 DQMYVRYQIPQR----AKRYPITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLG 123 (328)
T ss_dssp SCEEEEEEEETT----CCSSCEEEECCTTCCGGGGSSCTTSCCCHHHHHHHTTCCEEEEECTTSTTSCCCCHHHHHHHTT
T ss_pred eeEEEEEEccCC----CCCccEEEEeCCCCCCCccccCCCCchHHHHHHHHCCCeEEEECCCCcccCCCCCccccccccc
Confidence 345566666764 133679999998654432221 0123445555999999999999776543211000
Q ss_pred -----------------------cc-cC---------CcchHHH------------------HHHHHHHHHHcCCCCCCc
Q 003878 591 -----------------------AL-AK---------KQNCFDD------------------FISASEYLISAGYTQSRK 619 (789)
Q Consensus 591 -----------------------~~-~~---------~~~~~~D------------------~~~~~~~L~~~~~~d~~~ 619 (789)
.. .+ ....+++ +.+++..+++.- ++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~----~~ 199 (328)
T 1qlw_A 124 KAPASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLGSMPTPNPTVANLSKLAIKL----DG 199 (328)
T ss_dssp SSCGGGSCCCBCCCHHHHHHHTTSSSBTTBCCTTCCSCGGGHHHHHHHCCCBCGGGSCSSCHHHHHHHHHHHHH----TS
T ss_pred ccCcccccceeccchhhhhhHhhhcccCCccCcCccCCHHHHHHHHHHhCccccccCCChhHHHHHHHHHHHHh----CC
Confidence 00 00 0001333 555566666541 38
Q ss_pred EEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCC
Q 003878 620 LCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQN 699 (789)
Q Consensus 620 i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~ 699 (789)
++++|||+||.+++.++.++|++++++|+..|... .+ + ....+.
T Consensus 200 ~~lvGhS~GG~~a~~~a~~~p~~v~~~v~~~p~~~------------------~~-------------~-~~~~~~---- 243 (328)
T 1qlw_A 200 TVLLSHSQSGIYPFQTAAMNPKGITAIVSVEPGEC------------------PK-------------P-EDVKPL---- 243 (328)
T ss_dssp EEEEEEGGGTTHHHHHHHHCCTTEEEEEEESCSCC------------------CC-------------G-GGCGGG----
T ss_pred ceEEEECcccHHHHHHHHhChhheeEEEEeCCCCC------------------CC-------------H-HHHhhc----
Confidence 99999999999999999999999999999887430 00 0 011111
Q ss_pred CCCCCCCCeEEEEecCCCCCCCc-----HHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCC-----cCCCCchhhHH
Q 003878 700 PDKPFQYPSTLLLTADHDDRVVP-----LHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAG-----HGVGLPTQKMI 769 (789)
Q Consensus 700 ~~~~~~~pp~Li~~g~~D~~V~~-----~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~g-----H~~~~~~~~~~ 769 (789)
...|+|+++|++|..+|+ .++.++++.++.. |..+++.+++++| |......+ ..
T Consensus 244 -----~~~PvLii~G~~D~~~p~~~~~~~~~~~~~~~l~~~----------g~~~~~~~~~~~gi~G~~H~~~~~~~-~~ 307 (328)
T 1qlw_A 244 -----TSIPVLVVFGDHIEEFPRWAPRLKACHAFIDALNAA----------GGKGQLMSLPALGVHGNSHMMMQDRN-NL 307 (328)
T ss_dssp -----TTSCEEEEECSSCTTCTTTHHHHHHHHHHHHHHHHT----------TCCEEEEEGGGGTCCCCCTTGGGSTT-HH
T ss_pred -----cCCCEEEEeccCCccccchhhHHHHHHHHHHHHHHh----------CCCceEEEcCCCCcCCCcccchhccC-HH
Confidence 247999999999999997 8899999999887 7889999999666 98755442 24
Q ss_pred HHHHHHHHHHHHHhCC
Q 003878 770 DEAADRYGFMAKMLGA 785 (789)
Q Consensus 770 ~~~~~~~~fl~~~l~~ 785 (789)
+..+.+.+||.+++..
T Consensus 308 ~~~~~i~~fl~~~~~~ 323 (328)
T 1qlw_A 308 QVADLILDWIGRNTAK 323 (328)
T ss_dssp HHHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHHHhcccC
Confidence 6677899999988753
No 130
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=99.56 E-value=3.3e-14 Score=154.67 Aligned_cols=249 Identities=11% Similarity=-0.003 Sum_probs=146.5
Q ss_pred EEEecCCCceEEEEEEEecCCCCC-CCCccEEEEEcCCCCccCC----------CC-CCHHH--HHHHHcCCeEEEEEee
Q 003878 511 VFVPSKDGSTKIPMFIVSKKNIKL-DGSHPCLLYGYGGFNISVT----------PS-FSVSR--TILMRHLGAVFCIANI 576 (789)
Q Consensus 511 ~~~~s~dg~~~i~~~l~~p~~~~~-~~~~P~ll~~hGg~~~~~~----------~~-~~~~~--~~~l~~~G~~v~~~~~ 576 (789)
-.++..+| ..|...|.+..--.+ ..+.|+||++||..+.... .. |.... ...+..+||.|+++|.
T Consensus 15 ~~~~~~~g-~~l~~~i~y~~~g~~~~~~~p~vll~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~ 93 (377)
T 3i1i_A 15 KEYTFENG-RTIPVQMGYETYGTLNRERSNVILICHYFSATSHAAGKYTAHDEESGWWDGLIGPGKAIDTNQYFVICTDN 93 (377)
T ss_dssp EEEECTTS-CEEEEEEEEEEESCCCTTCCCEEEEECCTTCCSCCSSCSSTTCSSCCTTTTTEETTSSEETTTCEEEEECC
T ss_pred cceeecCC-CEeeeeEEEEeecccCCCCCCEEEEeccccCcchhccccccccccccchhhhcCCCCccccccEEEEEecc
Confidence 34666777 666444444331111 2346999999998776544 11 22111 0223348999999999
Q ss_pred cCCCC-----CChhHHhcccc--------cCCcchHHHHHHHHHHHHHcCCCCCCcEE-EEeeChHHHHHHHHHHhCCCc
Q 003878 577 RGGGE-----YGEEWHKGGAL--------AKKQNCFDDFISASEYLISAGYTQSRKLC-IEGGSNGGLLVGACINQRPDL 642 (789)
Q Consensus 577 RG~g~-----~g~~~~~~~~~--------~~~~~~~~D~~~~~~~L~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~pd~ 642 (789)
||.|. +|..-...... .....+++|+.+.+..+++. ...+++. ++|||+||.+++.++.++|++
T Consensus 94 ~G~G~S~G~~~g~~g~~~~~p~~~~~~~~~~~~~~~~~~~~d~~~~l~~--l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~ 171 (377)
T 3i1i_A 94 LCNVQVKNPHVITTGPKSINPKTGDEYAMDFPVFTFLDVARMQCELIKD--MGIARLHAVMGPSAGGMIAQQWAVHYPHM 171 (377)
T ss_dssp TTCSCTTSTTCCCCSTTSBCTTTSSBCGGGSCCCCHHHHHHHHHHHHHH--TTCCCBSEEEEETHHHHHHHHHHHHCTTT
T ss_pred cccccccCCCcccCCCCCCCCCCCCcccCCCCCCCHHHHHHHHHHHHHH--cCCCcEeeEEeeCHhHHHHHHHHHHChHH
Confidence 97643 11100000000 11134778888888888765 3445785 999999999999999999999
Q ss_pred eeEEEe-cCCccccccc--------------cc--------------------------ccCCccchhhcCC--------
Q 003878 643 FGCALA-HVGVMDMLRY--------------HK--------------------------FTIGHAWVSDFGC-------- 673 (789)
Q Consensus 643 f~a~v~-~~p~~d~~~~--------------~~--------------------------~~~~~~~~~e~g~-------- 673 (789)
++++|+ ..+....... .. ......+...++.
T Consensus 172 v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (377)
T 3i1i_A 172 VERMIGVITNPQNPIITSVNVAQNAIEAIRLDPSWKGGKYGEEQPMKGLQLANRMMFMNAFDEHFYETTYPRNSIEVEPY 251 (377)
T ss_dssp BSEEEEESCCSBCCHHHHHHTTHHHHHHHHHSGGGGGGCCTTSCCHHHHHHHHHHHHTTSSCHHHHHHHSCCCSSCCGGG
T ss_pred HHHhcccCcCCCcCCchhhHHHHHHHHHHhcCCCccCCccccCCccchHHHHHHHHhhhcCCHHHHHHHhhhhhcccccc
Confidence 999998 5443320000 00 0000000011111
Q ss_pred ----------------------CCcHHHHH----HHHhcCc-------ccCCCCCCCCCCCCCCCCCeEEEEecCCCCCC
Q 003878 674 ----------------------SEEEEEFY----WLIKYSP-------LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRV 720 (789)
Q Consensus 674 ----------------------p~~~~~~~----~l~~~sP-------~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V 720 (789)
..++..+. .+..+.+ ...+.++ ..|+|+++|++|..+
T Consensus 252 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~Pvlii~G~~D~~~ 321 (377)
T 3i1i_A 252 EKVSSLTSFEKEINKLTYRSIELVDANSWMYTAKAVLLHDIAHGFSSLEEALSNV----------EANVLMIPCKQDLLQ 321 (377)
T ss_dssp TCTTCCCHHHHHHHHHHHHTTTTCCHHHHHHHHHHHHHCBTTTTSSCHHHHHHTC----------CSEEEEECBTTCSSS
T ss_pred ccccchhHHHHHHHHHHhhhhcccCHHHHHHHHHHHhhcccccccCCHHHHHhhC----------CCCEEEEecCCcccc
Confidence 00111110 1111111 1112233 579999999999999
Q ss_pred CcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCC-CCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 721 VPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERK-AGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 721 ~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~-~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
|+..+.++++.++.. +..+++.++++ +||....... .+..+.+.+||.+++.
T Consensus 322 ~~~~~~~~~~~~~~~----------g~~~~~~~i~~~~gH~~~~e~p--~~~~~~i~~fl~~~~~ 374 (377)
T 3i1i_A 322 PSRYNYKMVDLLQKQ----------GKYAEVYEIESINGHMAGVFDI--HLFEKKVYEFLNRKVS 374 (377)
T ss_dssp CTHHHHHHHHHHHHT----------TCCEEECCBCCTTGGGHHHHCG--GGTHHHHHHHHHSCCS
T ss_pred CHHHHHHHHHHHHhc----------CCCceEEEcCCCCCCcchhcCH--HHHHHHHHHHHHhhhh
Confidence 999999999999875 56688999998 9997543222 2456678889987654
No 131
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=99.56 E-value=3.2e-14 Score=151.23 Aligned_cols=215 Identities=14% Similarity=0.026 Sum_probs=135.9
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.+| .++.+... ++.|+||++||..+... .|. .....|+ .||.|+++|+||.|... ....
T Consensus 55 ~~~-~~~~~~~~--------g~~p~vv~lhG~~~~~~--~~~-~~~~~L~-~~~~v~~~D~~G~G~S~--------~~~~ 113 (314)
T 3kxp_A 55 IGR-ITLNVREK--------GSGPLMLFFHGITSNSA--VFE-PLMIRLS-DRFTTIAVDQRGHGLSD--------KPET 113 (314)
T ss_dssp CSS-CEEEEEEE--------CCSSEEEEECCTTCCGG--GGH-HHHHTTT-TTSEEEEECCTTSTTSC--------CCSS
T ss_pred ECC-EEEEEEec--------CCCCEEEEECCCCCCHH--HHH-HHHHHHH-cCCeEEEEeCCCcCCCC--------CCCC
Confidence 367 77766543 23689999999865543 333 3456676 58999999999987643 1223
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc------ccCCc----
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------FTIGH---- 665 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~------~~~~~---- 665 (789)
...++|+.+.+..+++. .+.++++++|+|+||.+++.++.++|++++++|+..|...+..... .....
T Consensus 114 ~~~~~~~~~dl~~~l~~--l~~~~v~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (314)
T 3kxp_A 114 GYEANDYADDIAGLIRT--LARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYIETEALDALEARVNAGSQLFE 191 (314)
T ss_dssp CCSHHHHHHHHHHHHHH--HTSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCTTCCHHHHHHHHHHTTTTCSCBS
T ss_pred CCCHHHHHHHHHHHHHH--hCCCCcEEEEECchHHHHHHHHHhChhheeEEEEeCCCCCCCcchhhHHHHHhhhchhhhc
Confidence 45667777777766655 2346999999999999999999999999999999877554321100 00000
Q ss_pred -------cchhhcCCCCcHHHHHHHHhc---------------------------CcccCCCCCCCCCCCCCCCCCeEEE
Q 003878 666 -------AWVSDFGCSEEEEEFYWLIKY---------------------------SPLHNVRRPWEQNPDKPFQYPSTLL 711 (789)
Q Consensus 666 -------~~~~e~g~p~~~~~~~~l~~~---------------------------sP~~~v~~~~~~~~~~~~~~pp~Li 711 (789)
.+...+.. ...+....+... +....+.++ ..|+|+
T Consensus 192 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----------~~P~Li 260 (314)
T 3kxp_A 192 DIKAVEAYLAGRYPN-IPADAIRIRAESGYQPVDGGLRPLASSAAMAQTARGLRSDLVPAYRDV----------TKPVLI 260 (314)
T ss_dssp SHHHHHHHHHHHSTT-SCHHHHHHHHHHSEEEETTEEEESSCHHHHHHHHHHTTSCCHHHHHHC----------CSCEEE
T ss_pred CHHHHHHHHHhhccc-CchHHHHHHhhhhhcccccccccccChhhhhhhccccCcchhhHhhcC----------CCCEEE
Confidence 00000000 011111111000 111222233 679999
Q ss_pred EecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 712 LTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 712 ~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
++|++|..+|+..+.++.+.+.. +++.+++++||....... .+..+.+.+||.
T Consensus 261 i~G~~D~~~~~~~~~~~~~~~~~--------------~~~~~~~g~gH~~~~e~~--~~~~~~i~~fl~ 313 (314)
T 3kxp_A 261 VRGESSKLVSAAALAKTSRLRPD--------------LPVVVVPGADHYVNEVSP--EITLKAITNFID 313 (314)
T ss_dssp EEETTCSSSCHHHHHHHHHHCTT--------------SCEEEETTCCSCHHHHCH--HHHHHHHHHHHH
T ss_pred EecCCCccCCHHHHHHHHHhCCC--------------ceEEEcCCCCCcchhhCH--HHHHHHHHHHHh
Confidence 99999999999998888776643 268899999998643222 355667778875
No 132
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=99.56 E-value=3.7e-14 Score=146.57 Aligned_cols=117 Identities=15% Similarity=0.090 Sum_probs=84.7
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCc
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 596 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~ 596 (789)
+| .++.+... ++.|.||++||..+.... |.. ....|. .||.|+++|+||.|..... .....
T Consensus 11 ~~-~~~~y~~~--------g~~~~vv~~HG~~~~~~~--~~~-~~~~L~-~~~~vi~~d~~G~G~s~~~------~~~~~ 71 (278)
T 3oos_A 11 PR-GKFEYFLK--------GEGPPLCVTHLYSEYNDN--GNT-FANPFT-DHYSVYLVNLKGCGNSDSA------KNDSE 71 (278)
T ss_dssp TT-EEEEEEEE--------CSSSEEEECCSSEECCTT--CCT-TTGGGG-GTSEEEEECCTTSTTSCCC------SSGGG
T ss_pred CC-ceEEEEec--------CCCCeEEEEcCCCcchHH--HHH-HHHHhh-cCceEEEEcCCCCCCCCCC------CCccc
Confidence 66 66654322 245789999998765444 332 235566 5999999999998754321 11123
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccc
Q 003878 597 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 654 (789)
Q Consensus 597 ~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d 654 (789)
.+++|+.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+..|...
T Consensus 72 ~~~~~~~~~~~~~~~~--l~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~ 127 (278)
T 3oos_A 72 YSMTETIKDLEAIREA--LYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAAS 127 (278)
T ss_dssp GSHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred CcHHHHHHHHHHHHHH--hCCCeEEEEeecccHHHHHHHHHhCchhhCeEEEecCccc
Confidence 4567777777766665 2446899999999999999999999999999999998876
No 133
>1uxo_A YDEN protein; hydrolase, A/B hydrolase, esterase, PSI, protein structure initiative, MCSG, midwest center for structural genomics; 1.8A {Bacillus subtilis} SCOP: c.69.1.31
Probab=99.55 E-value=1.2e-13 Score=135.65 Aligned_cols=183 Identities=11% Similarity=0.003 Sum_probs=122.5
Q ss_pred CccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCC
Q 003878 537 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 616 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d 616 (789)
..|+||++||..+.... .|.......|.++||.|+.+|+|.++. .+++++.+.+..+++.-
T Consensus 3 g~p~vv~~HG~~~~~~~-~~~~~~~~~l~~~g~~v~~~d~~~~~~---------------~~~~~~~~~~~~~~~~~--- 63 (192)
T 1uxo_A 3 GTKQVYIIHGYRASSTN-HWFPWLKKRLLADGVQADILNMPNPLQ---------------PRLEDWLDTLSLYQHTL--- 63 (192)
T ss_dssp -CCEEEEECCTTCCTTS-TTHHHHHHHHHHTTCEEEEECCSCTTS---------------CCHHHHHHHHHTTGGGC---
T ss_pred CCCEEEEEcCCCCCcch-hHHHHHHHHHHhCCcEEEEecCCCCCC---------------CCHHHHHHHHHHHHHhc---
Confidence 35889999997665432 444444445645899999999993211 14666666666655542
Q ss_pred CCcEEEEeeChHHHHHHHHHHhCCC--ceeEEEecCCcccccccccccCCccchhhcC-CCCcHHHHHHHHhcCcccCCC
Q 003878 617 SRKLCIEGGSNGGLLVGACINQRPD--LFGCALAHVGVMDMLRYHKFTIGHAWVSDFG-CSEEEEEFYWLIKYSPLHNVR 693 (789)
Q Consensus 617 ~~~i~i~G~S~GG~l~~~~~~~~pd--~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g-~p~~~~~~~~l~~~sP~~~v~ 693 (789)
.+++.++|+|+||.+++.++.++|+ +++++|+..|+........ .. ..|. .|.+.+ .+ .
T Consensus 64 ~~~~~l~G~S~Gg~~a~~~a~~~~~~~~v~~~v~~~~~~~~~~~~~-----~~-~~~~~~~~~~~---~~---------~ 125 (192)
T 1uxo_A 64 HENTYLVAHSLGCPAILRFLEHLQLRAALGGIILVSGFAKSLPTLQ-----ML-DEFTQGSFDHQ---KI---------I 125 (192)
T ss_dssp CTTEEEEEETTHHHHHHHHHHTCCCSSCEEEEEEETCCSSCCTTCG-----GG-GGGTCSCCCHH---HH---------H
T ss_pred cCCEEEEEeCccHHHHHHHHHHhcccCCccEEEEeccCCCccccch-----hh-hhhhhcCCCHH---HH---------H
Confidence 5799999999999999999999999 9999999998765432211 00 1121 122211 11 1
Q ss_pred CCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHH
Q 003878 694 RPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAA 773 (789)
Q Consensus 694 ~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~ 773 (789)
+. .+|+|+++|++|..||+.++.++.+.+ .. ++.+++++||.+...... ...
T Consensus 126 ~~----------~~P~l~i~g~~D~~~~~~~~~~~~~~~-~~--------------~~~~~~~~gH~~~~~~~~---~~~ 177 (192)
T 1uxo_A 126 ES----------AKHRAVIASKDDQIVPFSFSKDLAQQI-DA--------------ALYEVQHGGHFLEDEGFT---SLP 177 (192)
T ss_dssp HH----------EEEEEEEEETTCSSSCHHHHHHHHHHT-TC--------------EEEEETTCTTSCGGGTCS---CCH
T ss_pred hh----------cCCEEEEecCCCCcCCHHHHHHHHHhc-Cc--------------eEEEeCCCcCcccccccc---cHH
Confidence 22 469999999999999999988887776 32 688999999987543221 122
Q ss_pred HHHHHHHHHhC
Q 003878 774 DRYGFMAKMLG 784 (789)
Q Consensus 774 ~~~~fl~~~l~ 784 (789)
.+.+|+.+.+.
T Consensus 178 ~~~~~l~~~l~ 188 (192)
T 1uxo_A 178 IVYDVLTSYFS 188 (192)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 35566665553
No 134
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=99.55 E-value=7.5e-15 Score=146.17 Aligned_cols=191 Identities=12% Similarity=0.005 Sum_probs=128.1
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHH-HHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVS-RTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~-~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
+| .+|.+..+.|++ .++.|+||++||+.+... .|... ....|.++||.|+.+|+||.|...... .. ..-
T Consensus 15 ~g-~~l~~~~~~p~~---~~~~~~vv~~hG~~~~~~--~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~~~~---~~-~~~ 84 (210)
T 1imj_A 15 QG-QALFFREALPGS---GQARFSVLLLHGIRFSSE--TWQNLGTLHRLAQAGYRAVAIDLPGLGHSKEAA---AP-API 84 (210)
T ss_dssp TT-EEECEEEEECSS---SCCSCEEEECCCTTCCHH--HHHHHTHHHHHHHTTCEEEEECCTTSGGGTTSC---CS-SCT
T ss_pred CC-eEEEEEEeCCCC---CCCCceEEEECCCCCccc--eeecchhHHHHHHCCCeEEEecCCCCCCCCCCC---Cc-chh
Confidence 88 999999998875 346799999999865533 23321 245566689999999999976432211 00 000
Q ss_pred cchH--HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCC
Q 003878 596 QNCF--DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGC 673 (789)
Q Consensus 596 ~~~~--~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~ 673 (789)
.... +|+.+.++.+ +.++++++|+|+||.+++.++.++|++++++|+..|..... +
T Consensus 85 ~~~~~~~~~~~~~~~~------~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~v~~~~~~~~~----------~------ 142 (210)
T 1imj_A 85 GELAPGSFLAAVVDAL------ELGPPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPICTDK----------I------ 142 (210)
T ss_dssp TSCCCTHHHHHHHHHH------TCCSCEEEEEGGGHHHHHHHHTSTTCCCSEEEEESCSCGGG----------S------
T ss_pred hhcchHHHHHHHHHHh------CCCCeEEEEECchHHHHHHHHHhCccccceEEEeCCCcccc----------c------
Confidence 1111 4555555443 34689999999999999999999999999999998865310 0
Q ss_pred CCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEE
Q 003878 674 SEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRI 753 (789)
Q Consensus 674 p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~ 753 (789)
.... + ... ..|+|+++|++|. ++++.+.++ +.+ ...++.+
T Consensus 143 --~~~~---~---------~~~----------~~p~l~i~g~~D~-~~~~~~~~~-~~~--------------~~~~~~~ 182 (210)
T 1imj_A 143 --NAAN---Y---------ASV----------KTPALIVYGDQDP-MGQTSFEHL-KQL--------------PNHRVLI 182 (210)
T ss_dssp --CHHH---H---------HTC----------CSCEEEEEETTCH-HHHHHHHHH-TTS--------------SSEEEEE
T ss_pred --cchh---h---------hhC----------CCCEEEEEcCccc-CCHHHHHHH-hhC--------------CCCCEEE
Confidence 0011 1 122 5799999999999 987776655 332 2368899
Q ss_pred eCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 754 ERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 754 ~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
++++||....... ....+.+.+||.+
T Consensus 183 ~~~~~H~~~~~~~--~~~~~~i~~fl~~ 208 (210)
T 1imj_A 183 MKGAGHPCYLDKP--EEWHTGLLDFLQG 208 (210)
T ss_dssp ETTCCTTHHHHCH--HHHHHHHHHHHHT
T ss_pred ecCCCcchhhcCH--HHHHHHHHHHHHh
Confidence 9999998532222 2445667777754
No 135
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=99.54 E-value=1.2e-13 Score=141.56 Aligned_cols=214 Identities=7% Similarity=-0.028 Sum_probs=130.8
Q ss_pred cEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 003878 539 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSR 618 (789)
Q Consensus 539 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~ 618 (789)
|.||++||..+.... |... ...|.++||.|+++|.||.|..... .....++++..+.+..+++.-. ..+
T Consensus 5 ~~vv~lHG~~~~~~~--~~~~-~~~l~~~g~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~l~-~~~ 73 (258)
T 3dqz_A 5 HHFVLVHNAYHGAWI--WYKL-KPLLESAGHRVTAVELAASGIDPRP-------IQAVETVDEYSKPLIETLKSLP-ENE 73 (258)
T ss_dssp CEEEEECCTTCCGGG--GTTH-HHHHHHTTCEEEEECCTTSTTCSSC-------GGGCCSHHHHHHHHHHHHHTSC-TTC
T ss_pred CcEEEECCCCCcccc--HHHH-HHHHHhCCCEEEEecCCCCcCCCCC-------CCccccHHHhHHHHHHHHHHhc-ccC
Confidence 899999998765443 4433 4455558999999999998764321 1122456666666666665521 137
Q ss_pred cEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccc-------cCCccch-----------------------
Q 003878 619 KLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKF-------TIGHAWV----------------------- 668 (789)
Q Consensus 619 ~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~-------~~~~~~~----------------------- 668 (789)
++.++|||+||.+++.++.++|++++++|+..|.......... .....|.
T Consensus 74 ~~~lvGhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (258)
T 3dqz_A 74 EVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPDTTHVPSHVLDKYMEMPGGLGDCEFSSHETRNGTMSLLKMGPKF 153 (258)
T ss_dssp CEEEEEETTHHHHHHHHHTTCGGGEEEEEEESCCCCCSSSCTTHHHHHHHTSTTCCTTCEEEEEEETTEEEEEEECCHHH
T ss_pred ceEEEEeChhHHHHHHHHHhChHhhcEEEEecCCCCCCCCcchHHHHHhcccchhhhhcccchhhhhccChhhhhhhHHH
Confidence 8999999999999999999999999999988775432211000 0000000
Q ss_pred --hhcCCCCcHHHHHHHHh-cCcccC-------CCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhcc
Q 003878 669 --SDFGCSEEEEEFYWLIK-YSPLHN-------VRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCT 738 (789)
Q Consensus 669 --~e~g~p~~~~~~~~l~~-~sP~~~-------v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~ 738 (789)
..+.....++....+.. ..+... .... ........|+|+++|++|..+|+..+.++.+.+...
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~~--- 226 (258)
T 3dqz_A 154 MKARLYQNCPIEDYELAKMLHRQGSFFTEDLSKKEKF----SEEGYGSVQRVYVMSSEDKAIPCDFIRWMIDNFNVS--- 226 (258)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCEECCHHHHHTSCCC----CTTTGGGSCEEEEEETTCSSSCHHHHHHHHHHSCCS---
T ss_pred HHHHhhccCCHHHHHHHHHhccCCchhhhhhhccccc----cccccccCCEEEEECCCCeeeCHHHHHHHHHhCCcc---
Confidence 00111111222222211 112111 0000 000012479999999999999998888777665422
Q ss_pred CCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 739 SLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 739 ~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
++.+++++||....... .+..+.+.+|+.+++
T Consensus 227 -----------~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~~~ 258 (258)
T 3dqz_A 227 -----------KVYEIDGGDHMVMLSKP--QKLFDSLSAIATDYM 258 (258)
T ss_dssp -----------CEEEETTCCSCHHHHSH--HHHHHHHHHHHHHTC
T ss_pred -----------cEEEcCCCCCchhhcCh--HHHHHHHHHHHHHhC
Confidence 67889999998654322 356667888888764
No 136
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=99.53 E-value=5.9e-14 Score=144.75 Aligned_cols=215 Identities=13% Similarity=0.094 Sum_probs=130.4
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 615 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~ 615 (789)
...|+||++||..+... .|.. ....|.++||.|+++|+||.|..... .....++++..+.+..+++.- .
T Consensus 10 ~~~~~vvllHG~~~~~~--~~~~-~~~~l~~~g~~v~~~D~~G~G~S~~~-------~~~~~~~~~~~~~~~~~l~~l-~ 78 (267)
T 3sty_A 10 FVKKHFVLVHAAFHGAW--CWYK-IVALMRSSGHNVTALDLGASGINPKQ-------ALQIPNFSDYLSPLMEFMASL-P 78 (267)
T ss_dssp CCCCEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTCSCC-------GGGCCSHHHHHHHHHHHHHTS-C
T ss_pred CCCCeEEEECCCCCCcc--hHHH-HHHHHHhcCCeEEEeccccCCCCCCc-------CCccCCHHHHHHHHHHHHHhc-C
Confidence 45689999999876543 3443 34555558999999999998764322 111245667766666666552 1
Q ss_pred CCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccc------cc-cCCccch--------------------
Q 003878 616 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH------KF-TIGHAWV-------------------- 668 (789)
Q Consensus 616 d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~------~~-~~~~~~~-------------------- 668 (789)
+.+++.++|||+||.+++.++.++|++++++|+..|........ .. .....|.
T Consensus 79 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (267)
T 3sty_A 79 ANEKIILVGHALGGLAISKAMETFPEKISVAVFLSGLMPGPNIDATTVCTKAGSAVLGQLDNCVTYENGPTNPPTTLIAG 158 (267)
T ss_dssp TTSCEEEEEETTHHHHHHHHHHHSGGGEEEEEEESCCCCBTTBCHHHHHHHHHHTTTTCTTCEEECTTCTTSCCCEEECC
T ss_pred CCCCEEEEEEcHHHHHHHHHHHhChhhcceEEEecCCCCCCcchHHHHHHHhcccchhhhhhhhhhhhhhhcccchhhhh
Confidence 45799999999999999999999999999999887754321110 00 0000000
Q ss_pred -----hhcCCCCcHHHHHHHHhc-CcccCC--------CCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHH
Q 003878 669 -----SDFGCSEEEEEFYWLIKY-SPLHNV--------RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQY 734 (789)
Q Consensus 669 -----~e~g~p~~~~~~~~l~~~-sP~~~v--------~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~ 734 (789)
..+.....++....+... .+.... ... ........|+|+++|++|..+++..+.++.+.+..
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~P~l~i~g~~D~~~~~~~~~~~~~~~~~ 234 (267)
T 3sty_A 159 PKFLATNVYHLSPIEDLALATALVRPLYLYLAEDISKEVVL----SSKRYGSVKRVFIVATENDALKKEFLKLMIEKNPP 234 (267)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCEECCCHHHHHHHCCC----CTTTGGGSCEEEEECCCSCHHHHHHHHHHHHHSCC
T ss_pred HHHHHHhhcccCCHHHHHHHHHhhccchhHHHHHhhcchhc----ccccccCCCEEEEEeCCCCccCHHHHHHHHHhCCC
Confidence 001111112222222111 111110 000 00001147999999999999998887777665532
Q ss_pred hhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 735 VLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 735 ~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
.++.+++++||....... .+..+.+.+|+.+
T Consensus 235 --------------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 265 (267)
T 3sty_A 235 --------------DEVKEIEGSDHVTMMSKP--QQLFTTLLSIANK 265 (267)
T ss_dssp --------------SEEEECTTCCSCHHHHSH--HHHHHHHHHHHHH
T ss_pred --------------ceEEEeCCCCccccccCh--HHHHHHHHHHHHh
Confidence 378999999998643322 3556677788765
No 137
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.53 E-value=3.2e-13 Score=160.92 Aligned_cols=289 Identities=12% Similarity=0.125 Sum_probs=172.0
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccccee
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFF 213 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 213 (789)
..+++|||||++++ + +..| +|++||+++|+... .+... ...- .-..++.+.|+++
T Consensus 19 ~~~~~~spdg~~~~-~-~~dg----~i~~~d~~~g~~~~-~~~~~------~~~~--~~v~~~~~SpDg~---------- 73 (723)
T 1xfd_A 19 DPEAKWISDTEFIY-R-EQKG----TVRLWNVETNTSTV-LIEGK------KIES--LRAIRYEISPDRE---------- 73 (723)
T ss_dssp CCCCCBSSSSCBCC-C-CSSS----CEEEBCGGGCCCEE-EECTT------TTTT--TTCSEEEECTTSS----------
T ss_pred ccccEEcCCCcEEE-E-eCCC----CEEEEECCCCcEEE-Eeccc------cccc--cccceEEECCCCC----------
Confidence 35678999999653 3 2222 89999999996542 11111 0000 0023456678997
Q ss_pred eEEEeeecccc--------ceeeeeeec----ccc--------cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCc
Q 003878 214 FFYLFSLVKST--------IYSFWSVVS----QFK--------FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNL 273 (789)
Q Consensus 214 ~~~~~~s~~~g--------~~~l~~~~~----~~~--------~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~ 273 (789)
+++|.++..+ ...+|.+.. ++. ...++|||||+.|+|...
T Consensus 74 -~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~------------------- 133 (723)
T 1xfd_A 74 -YALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE------------------- 133 (723)
T ss_dssp -EEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-------------------
T ss_pred -EEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-------------------
Confidence 6677766443 333554432 111 346899999999999853
Q ss_pred ccEEEEEECCCCCCCcEEEEecCCCCe----------------eEEEEEEecCCcEEEEEEEcCCC--------------
Q 003878 274 YHEFYYHFLGTKQSEDILCWKDPEHPK----------------YIFSGHVTEDGQYLVMCIEENCD-------------- 323 (789)
Q Consensus 274 ~~~i~~~~lg~~~~~~~~~~~~~~~~~----------------~~~~~~~SpDG~~l~~~~~~~~~-------------- 323 (789)
.+|+++++.++.. ..+........ ...++.|||||++|++.+.+...
T Consensus 134 -~~i~~~~~~~g~~--~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~ 210 (723)
T 1xfd_A 134 -NNIYYCAHVGKQA--IRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIY 210 (723)
T ss_dssp -TEEEEESSSSSCC--EEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSS
T ss_pred -CeEEEEECCCCce--EEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCC
Confidence 2589988876543 23333221111 01468999999999998765310
Q ss_pred ---------------CceEEEEEECCCCCCCcccccccCCCCccEeeecc-------ccceeEEEecCCCEEEEEECCCC
Q 003878 324 ---------------PVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG-------FDAQYEVIANDDTVFTFLTNKDA 381 (789)
Q Consensus 324 ---------------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~-------~~~~~~~~s~dG~~l~~~tn~~~ 381 (789)
....|+++|++++.. ...+... .......|||||+.+++.+++..
T Consensus 211 ~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~-------------~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 277 (723)
T 1xfd_A 211 PTVKPYHYPKAGSENPSISLHVIGLNGPTH-------------DLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQ 277 (723)
T ss_dssp CCCEEEECCBTTSCCCEEEEEEEESSSSCC-------------CEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTS
T ss_pred CcceeccCCCCCCCCCeeEEEEEECCCCce-------------eEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCC
Confidence 134799999987421 1112111 11122459999998877777655
Q ss_pred CCceEEEEECCCCCCeEEeccCCCCcee----eeEEEecCCE-EEEE-EEeCC----eEEEEEEE-CCCCce--eeeccc
Q 003878 382 PKYKIIRVDLKEPNDWFEVIPEAERDVL----ESATAVNLNQ-MIVS-YLSDV----KYVLQIRD-LKNGSL--LHQLPI 448 (789)
Q Consensus 382 ~~~~L~~~dl~~~~~~~~l~~~~~~~~i----~~v~~~~~~~-lv~~-~~~~g----~~~L~~~d-l~tG~~--~~~l~~ 448 (789)
....|+++|+++++ ...++.......+ ..+.|++++. +++. ...++ ..+|+++| ..+++. .+.++.
T Consensus 278 ~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~ 356 (723)
T 1xfd_A 278 NVSILTLCDATTGV-CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITS 356 (723)
T ss_dssp CEEEEEEEETTTCC-EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCC
T ss_pred CeEEEEEEeCCCCc-ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeec
Confidence 66789999998886 4444332111222 3678887644 6655 55666 67899999 554541 356664
Q ss_pred CCeeEE-EeecccCCcEEEEEEcCCCCCc--EEEEEECCC
Q 003878 449 EIGSVN-AISARREDSVVFISFTSFLIPG--IVYQCNLKT 485 (789)
Q Consensus 449 ~~~~v~-~~s~s~d~~~l~~~~ss~~~P~--~ly~~dl~t 485 (789)
....+. .+++++|++.|++.... ..|. .+|.++..+
T Consensus 357 ~~~~~~~~~~~spdg~~l~~~~~~-~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 357 GDWDVTKILAYDEKGNKIYFLSTE-DLPRRRQLYSANTVG 395 (723)
T ss_dssp SSSCEEEEEEEETTTTEEEEEESS-SCTTCCEEEEECSST
T ss_pred CCeEEEeeeEEcCCCCEEEEEEcC-CCCcceEEEEEeCCC
Confidence 433343 36899999998876543 2233 455555544
No 138
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=99.53 E-value=2.5e-13 Score=141.80 Aligned_cols=218 Identities=12% Similarity=0.039 Sum_probs=129.2
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccC
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 594 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~ 594 (789)
..+| .+|.+... + +.|.||++||..+... .|.. ....|.++||.|+++|.||.|..... .
T Consensus 9 ~~~g-~~l~y~~~---g-----~g~pvvllHG~~~~~~--~~~~-~~~~L~~~g~~vi~~D~~G~G~S~~~--------~ 68 (277)
T 1brt_A 9 NSTS-IDLYYEDH---G-----TGQPVVLIHGFPLSGH--SWER-QSAALLDAGYRVITYDRRGFGQSSQP--------T 68 (277)
T ss_dssp TTEE-EEEEEEEE---C-----SSSEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTSCCC--------S
T ss_pred cCCC-cEEEEEEc---C-----CCCeEEEECCCCCcHH--HHHH-HHHHHhhCCCEEEEeCCCCCCCCCCC--------C
Confidence 4577 77755432 2 2244899999876543 3444 34555558999999999998764321 1
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC-ceeEEEecCCccccccc-ccccCC--------
Q 003878 595 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD-LFGCALAHVGVMDMLRY-HKFTIG-------- 664 (789)
Q Consensus 595 ~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd-~f~a~v~~~p~~d~~~~-~~~~~~-------- 664 (789)
...+++++.+.+..+++. .+.+++.++|||+||.+++.++.++|+ +++++|+..|....... .....+
T Consensus 69 ~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (277)
T 1brt_A 69 TGYDYDTFAADLNTVLET--LDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTDDNPDGAAPQEFFD 146 (277)
T ss_dssp SCCSHHHHHHHHHHHHHH--HTCCSEEEEEEGGGHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCBTTBTTCSBCHHHHH
T ss_pred CCccHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHcCcceEEEEEEecCcCccccccccCccccccHHHHH
Confidence 223455555544444443 233689999999999999999999999 99999988764321100 000000
Q ss_pred ----------ccch----h-hc------CCCCcHHHHHHHH----------------hc--CcccCCCCCCCCCCCCCCC
Q 003878 665 ----------HAWV----S-DF------GCSEEEEEFYWLI----------------KY--SPLHNVRRPWEQNPDKPFQ 705 (789)
Q Consensus 665 ----------~~~~----~-e~------g~p~~~~~~~~l~----------------~~--sP~~~v~~~~~~~~~~~~~ 705 (789)
..+. . .+ +....++..+.+. .+ .....+.+ .
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------i 216 (277)
T 1brt_A 147 GIVAAVKADRYAFYTGFFNDFYNLDENLGTRISEEAVRNSWNTAASGGFFAAAAAPTTWYTDFRADIPR----------I 216 (277)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHTTHHHHBTTTBCHHHHHHHHHHHHHSCHHHHHHGGGGTTCCCTTTGGG----------C
T ss_pred HHHHHHhcCchhhHHHHHHHHhhccccccccCCHHHHHHHHHHHhccchHHHHHHHHHHhccchhhccc----------C
Confidence 0000 0 01 1111222111110 00 01111222 3
Q ss_pred CCeEEEEecCCCCCCCcHHH-HHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 706 YPSTLLLTADHDDRVVPLHS-LKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 706 ~pp~Li~~g~~D~~V~~~~~-~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
..|+|+++|++|..+|+..+ .++.+.+.. .++.+++++||....... .+..+.+.+||.
T Consensus 217 ~~P~lii~G~~D~~~~~~~~~~~~~~~~~~--------------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 276 (277)
T 1brt_A 217 DVPALILHGTGDRTLPIENTARVFHKALPS--------------AEYVEVEGAPHGLLWTHA--EEVNTALLAFLA 276 (277)
T ss_dssp CSCEEEEEETTCSSSCGGGTHHHHHHHCTT--------------SEEEEETTCCTTHHHHTH--HHHHHHHHHHHH
T ss_pred CCCeEEEecCCCccCChHHHHHHHHHHCCC--------------CcEEEeCCCCcchhhhCH--HHHHHHHHHHHh
Confidence 68999999999999999887 666655432 378899999998643222 345566788874
No 139
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.10A {Escherichia coli SE11}
Probab=99.53 E-value=6.4e-14 Score=145.89 Aligned_cols=209 Identities=13% Similarity=0.086 Sum_probs=133.2
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 615 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~ 615 (789)
+..|.||++||..+... .|.. ....|. ++|.|+++|.||.|.... ......+++++.+.+..+++.-
T Consensus 13 ~~~~~vvllHG~~~~~~--~w~~-~~~~L~-~~~~vi~~Dl~G~G~S~~-------~~~~~~~~~~~a~dl~~~l~~l-- 79 (268)
T 3v48_A 13 ADAPVVVLISGLGGSGS--YWLP-QLAVLE-QEYQVVCYDQRGTGNNPD-------TLAEDYSIAQMAAELHQALVAA-- 79 (268)
T ss_dssp TTCCEEEEECCTTCCGG--GGHH-HHHHHH-TTSEEEECCCTTBTTBCC-------CCCTTCCHHHHHHHHHHHHHHT--
T ss_pred CCCCEEEEeCCCCccHH--HHHH-HHHHHh-hcCeEEEECCCCCCCCCC-------CccccCCHHHHHHHHHHHHHHc--
Confidence 34689999999766542 4444 345666 789999999999875321 1112346777777777776652
Q ss_pred CCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc------------------------ccCCccchhhc
Q 003878 616 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------------------------FTIGHAWVSDF 671 (789)
Q Consensus 616 d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~------------------------~~~~~~~~~e~ 671 (789)
..+++.++|||+||.+++.++.++|++++++|+..+......... +.....|....
T Consensus 80 ~~~~~~lvGhS~GG~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (268)
T 3v48_A 80 GIEHYAVVGHALGALVGMQLALDYPASVTVLISVNGWLRINAHTRRCFQVRERLLYSGGAQAWVEAQPLFLYPADWMAAR 159 (268)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHTT
T ss_pred CCCCeEEEEecHHHHHHHHHHHhChhhceEEEEeccccccchhhhHHHHHHHHHHhccchhhhhhhhhhhcCchhhhhcc
Confidence 335899999999999999999999999999998776433211000 00000010000
Q ss_pred -------------CCCCcHH---HHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHh
Q 003878 672 -------------GCSEEEE---EFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 735 (789)
Q Consensus 672 -------------g~p~~~~---~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~ 735 (789)
..+.... ....+...+....+.++ ..|+|+++|++|..+|+..+.++.+.+..
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i----------~~P~Lii~G~~D~~~p~~~~~~l~~~~p~- 228 (268)
T 3v48_A 160 APRLEAEDALALAHFQGKNNLLRRLNALKRADFSHHADRI----------RCPVQIICASDDLLVPTACSSELHAALPD- 228 (268)
T ss_dssp HHHHHHHHHHHHHTCCCHHHHHHHHHHHHHCBCTTTGGGC----------CSCEEEEEETTCSSSCTHHHHHHHHHCSS-
T ss_pred cccchhhHHHHHhhcCchhHHHHHHHHHhccchhhhhhcC----------CCCeEEEEeCCCcccCHHHHHHHHHhCCc-
Confidence 0000000 11112222222233343 68999999999999999988888776543
Q ss_pred hccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 736 LCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
.++.+++++||....... ....+.+.+||...+
T Consensus 229 -------------~~~~~~~~~GH~~~~e~p--~~~~~~i~~fl~~~~ 261 (268)
T 3v48_A 229 -------------SQKMVMPYGGHACNVTDP--ETFNALLLNGLASLL 261 (268)
T ss_dssp -------------EEEEEESSCCTTHHHHCH--HHHHHHHHHHHHHHH
T ss_pred -------------CeEEEeCCCCcchhhcCH--HHHHHHHHHHHHHhc
Confidence 378899999998644333 356677889988754
No 140
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=99.52 E-value=6e-14 Score=142.19 Aligned_cols=184 Identities=13% Similarity=0.060 Sum_probs=121.2
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHH-----
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLI----- 610 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~----- 610 (789)
++.|+||++||..+...... ....+. +||.|+.+|+||.|... .....+++++.+.+..++
T Consensus 14 ~~~~~vv~~hG~~~~~~~~~----~~~~l~-~g~~v~~~d~~g~g~s~---------~~~~~~~~~~~~~~~~~~~~~~~ 79 (245)
T 3e0x_A 14 KSPNTLLFVHGSGCNLKIFG----ELEKYL-EDYNCILLDLKGHGESK---------GQCPSTVYGYIDNVANFITNSEV 79 (245)
T ss_dssp TCSCEEEEECCTTCCGGGGT----TGGGGC-TTSEEEEECCTTSTTCC---------SCCCSSHHHHHHHHHHHHHHCTT
T ss_pred CCCCEEEEEeCCcccHHHHH----HHHHHH-hCCEEEEecCCCCCCCC---------CCCCcCHHHHHHHHHHHHHhhhh
Confidence 35689999999876654433 223345 89999999999977643 112345666666666666
Q ss_pred -HcCCCCCCcEEEEeeChHHHHHHHHHHh-CCCceeEEEecCCccccccccc--------cc------------CCccch
Q 003878 611 -SAGYTQSRKLCIEGGSNGGLLVGACINQ-RPDLFGCALAHVGVMDMLRYHK--------FT------------IGHAWV 668 (789)
Q Consensus 611 -~~~~~d~~~i~i~G~S~GG~l~~~~~~~-~pd~f~a~v~~~p~~d~~~~~~--------~~------------~~~~~~ 668 (789)
+. .. ++.++|+|+||.+++.++.+ +|+ ++++|+..|..+...... .. ....+.
T Consensus 80 ~~~--~~--~~~l~G~S~Gg~~a~~~a~~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (245)
T 3e0x_A 80 TKH--QK--NITLIGYSMGGAIVLGVALKKLPN-VRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLLECIGGIDNPLS 154 (245)
T ss_dssp TTT--CS--CEEEEEETHHHHHHHHHHTTTCTT-EEEEEEESCCSBCTTSCHHHHHHHHTTCCCHHHHHHHHTCSCSHHH
T ss_pred Hhh--cC--ceEEEEeChhHHHHHHHHHHhCcc-ccEEEEecCCCccccccHHHHHHHHHHHHHhhcCcccccccchHHH
Confidence 33 23 99999999999999999999 999 999999998776521110 00 000000
Q ss_pred hhc-CC-CCcHH----HHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCC
Q 003878 669 SDF-GC-SEEEE----EFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLEN 742 (789)
Q Consensus 669 ~e~-g~-p~~~~----~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~ 742 (789)
..+ .. ..++. .+..+..+++...+.+. ..|+|+++|++|..+++..+.++.+.+.
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~P~l~i~g~~D~~~~~~~~~~~~~~~~--------- 215 (245)
T 3e0x_A 155 EKYFETLEKDPDIMINDLIACKLIDLVDNLKNI----------DIPVKAIVAKDELLTLVEYSEIIKKEVE--------- 215 (245)
T ss_dssp HHHHTTSCSSHHHHHHHHHHHHHCBCGGGGGGC----------CSCEEEEEETTCSSSCHHHHHHHHHHSS---------
T ss_pred HHHHHHHhcCcHHHHHHHHHhccccHHHHHHhC----------CCCEEEEEeCCCCCCCHHHHHHHHHHcC---------
Confidence 111 00 00111 12222344444445554 6899999999999999998877776653
Q ss_pred CCCCCcEEEEEeCCCCcCCC
Q 003878 743 SPQTNPIIGRIERKAGHGVG 762 (789)
Q Consensus 743 ~~~~~~~~l~~~~~~gH~~~ 762 (789)
.+++.+++++||...
T Consensus 216 -----~~~~~~~~~~gH~~~ 230 (245)
T 3e0x_A 216 -----NSELKIFETGKHFLL 230 (245)
T ss_dssp -----SEEEEEESSCGGGHH
T ss_pred -----CceEEEeCCCCcceE
Confidence 258899999999864
No 141
>1qe3_A PNB esterase, para-nitrobenzyl esterase; alpha-beta hydrolase directed evolution; 1.50A {Bacillus subtilis} SCOP: c.69.1.1 PDB: 1c7j_A 1c7i_A
Probab=99.52 E-value=3.3e-15 Score=169.19 Aligned_cols=217 Identities=15% Similarity=0.122 Sum_probs=140.2
Q ss_pred EEEEEEecCCCCCCCCccEEEEEcCCCCccCC---CCCCHHHHHHHHcCCeEEEEEeecCCC-CCChhHHhcccccCCcc
Q 003878 522 IPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT---PSFSVSRTILMRHLGAVFCIANIRGGG-EYGEEWHKGGALAKKQN 597 (789)
Q Consensus 522 i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~g~~~~~~~~~~~~~~ 597 (789)
+.+.++.|+.. .++.|+||++|||...... ..+.. ..++.+.|++|+.+|||.+. +|+..-... .......
T Consensus 83 L~l~v~~P~~~--~~~~PviV~iHGGg~~~g~~~~~~~~~--~~la~~g~~vvv~~nYRlg~~Gf~~~~~~~-~~~~~n~ 157 (489)
T 1qe3_A 83 LYVNVFAPDTP--SQNLPVMVWIHGGAFYLGAGSEPLYDG--SKLAAQGEVIVVTLNYRLGPFGFLHLSSFD-EAYSDNL 157 (489)
T ss_dssp CEEEEEEECSS--CCSEEEEEEECCSTTTSCCTTSGGGCC--HHHHHHHTCEEEEECCCCHHHHSCCCTTTC-TTSCSCH
T ss_pred CEEEEEeCCCC--CCCCCEEEEECCCccccCCCCCcccCH--HHHHhcCCEEEEecCccCcccccCcccccc-ccCCCCc
Confidence 55667788752 3458999999998633222 22332 34555234999999999432 333210000 0123344
Q ss_pred hHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC--CCceeEEEecCCcccccccccc-cCCccchhhc
Q 003878 598 CFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVMDMLRYHKF-TIGHAWVSDF 671 (789)
Q Consensus 598 ~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~--pd~f~a~v~~~p~~d~~~~~~~-~~~~~~~~e~ 671 (789)
.+.|+.++++|+.++. ..||+||+|+|+|+||.+++.++... +++|+++|+.+|..++...... .....+....
T Consensus 158 gl~D~~~al~wv~~~i~~fggDp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~~~~~~~~ 237 (489)
T 1qe3_A 158 GLLDQAAALKWVRENISAFGGDPDNVTVFGESAGGMSIAALLAMPAAKGLFQKAIMESGASRTMTKEQAASTAAAFLQVL 237 (489)
T ss_dssp HHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCCCCBCHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHhCCCcceeEEEEechHHHHHHHHHhCccccchHHHHHHhCCCCCCCCHHHHHHHHHHHHHHc
Confidence 5899999999998762 35999999999999999998887753 5799999999998744322110 0011122334
Q ss_pred CCCC-cHH------HHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCC
Q 003878 672 GCSE-EEE------EFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSP 744 (789)
Q Consensus 672 g~p~-~~~------~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~ 744 (789)
|++. ..+ ..+.+.+.+++.+.... .+|.+++++..|.+|.+.++.+++++++..
T Consensus 238 g~~~~~~~~Lr~~~~~~l~~~~~~~~~~~~~----------~~~~~~~~p~~D~~~~~~~~~~~~~~~~~~--------- 298 (489)
T 1qe3_A 238 GINESQLDRLHTVAAEDLLKAADQLRIAEKE----------NIFQLFFQPALDPKTLPEEPEKSIAEGAAS--------- 298 (489)
T ss_dssp TCCTTCGGGGGTSCHHHHHHHHHHHHTSTTC----------CTTSCSSCCBCBTTTBCSCHHHHHHTTTTT---------
T ss_pred CCCHHHHHHHHcCCHHHHHHHHHHhhhcccc----------ccCCccceEeECCeecCcCHHHHHhcCCCC---------
Confidence 6542 110 11223333333322222 456778899999999999999998877766
Q ss_pred CCCcEEEEEeCCCCcCCCC
Q 003878 745 QTNPIIGRIERKAGHGVGL 763 (789)
Q Consensus 745 ~~~~~~l~~~~~~gH~~~~ 763 (789)
++|+.+-.++++||.+..
T Consensus 299 -~vp~~~g~~~~Eg~~~~~ 316 (489)
T 1qe3_A 299 -GIPLLIGTTRDEGYLFFT 316 (489)
T ss_dssp -TCCEEEEEETTGGGGTCC
T ss_pred -CCCEEEeeecchhHhhcc
Confidence 899999999999998764
No 142
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=99.51 E-value=6.7e-14 Score=160.66 Aligned_cols=126 Identities=14% Similarity=0.147 Sum_probs=87.6
Q ss_pred EEEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHH
Q 003878 508 VHQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWH 587 (789)
Q Consensus 508 ~~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~ 587 (789)
.+..+++..|| .+|.+... ++.|+||++||+.+... .|... ...|.++||.|+++|+||.|.....
T Consensus 237 ~~~~~~~~~dg-~~l~~~~~--------g~~p~vv~~HG~~~~~~--~~~~~-~~~l~~~G~~v~~~D~~G~G~S~~~-- 302 (555)
T 3i28_A 237 MSHGYVTVKPR-VRLHFVEL--------GSGPAVCLCHGFPESWY--SWRYQ-IPALAQAGYRVLAMDMKGYGESSAP-- 302 (555)
T ss_dssp SEEEEEEEETT-EEEEEEEE--------CSSSEEEEECCTTCCGG--GGTTH-HHHHHHTTCEEEEECCTTSTTSCCC--
T ss_pred cceeEEEeCCC-cEEEEEEc--------CCCCEEEEEeCCCCchh--HHHHH-HHHHHhCCCEEEEecCCCCCCCCCC--
Confidence 34555666799 88876543 24589999999876643 34433 3445558999999999998754321
Q ss_pred hcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 588 KGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 588 ~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
......+++++.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+..|..
T Consensus 303 ----~~~~~~~~~~~~~d~~~~~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 362 (555)
T 3i28_A 303 ----PEIEEYCMEVLCKEMVTFLDK--LGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF 362 (555)
T ss_dssp ----SCGGGGSHHHHHHHHHHHHHH--HTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred ----CCcccccHHHHHHHHHHHHHH--cCCCcEEEEEecHHHHHHHHHHHhChHheeEEEEEccCC
Confidence 111223355555544444443 244699999999999999999999999999999876643
No 143
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=99.51 E-value=2.4e-14 Score=147.59 Aligned_cols=220 Identities=14% Similarity=0.048 Sum_probs=130.8
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHc-CCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH-LGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
+| .+|.+... ++.|.||++||..+... .|... ...|.+ +||.|+++|+||.|..... ..
T Consensus 9 ~g-~~l~y~~~--------g~~~~vv~lhG~~~~~~--~~~~~-~~~l~~~~g~~v~~~d~~G~G~s~~~--------~~ 68 (272)
T 3fsg_A 9 TR-SNISYFSI--------GSGTPIIFLHGLSLDKQ--STCLF-FEPLSNVGQYQRIYLDLPGMGNSDPI--------SP 68 (272)
T ss_dssp CT-TCCEEEEE--------CCSSEEEEECCTTCCHH--HHHHH-HTTSTTSTTSEEEEECCTTSTTCCCC--------SS
T ss_pred cC-CeEEEEEc--------CCCCeEEEEeCCCCcHH--HHHHH-HHHHhccCceEEEEecCCCCCCCCCC--------CC
Confidence 56 66654432 24578999999765432 22222 223443 5999999999997754221 11
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCC------ccch-
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIG------HAWV- 668 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~------~~~~- 668 (789)
.+++++.+.+..+++.- .+.+++.++|+|+||.+++.++.++|++++++|+..|............. ..+.
T Consensus 69 -~~~~~~~~~~~~~l~~~-~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (272)
T 3fsg_A 69 -STSDNVLETLIEAIEEI-IGARRFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINP 146 (272)
T ss_dssp -CSHHHHHHHHHHHHHHH-HTTCCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECSSCCGGGCCCCCCCCEECSCCCC
T ss_pred -CCHHHHHHHHHHHHHHH-hCCCcEEEEEeCchHHHHHHHHHhChHhhheeEEECcccccCccccccccchhhhhhhhhc
Confidence 44555555444444330 13468999999999999999999999999999998887533211100000 0000
Q ss_pred -------hhc---CCCCcHHHH-------------------HHHHhcCcc-----cCCCCCCCCCCCCCCCCCeEEEEec
Q 003878 669 -------SDF---GCSEEEEEF-------------------YWLIKYSPL-----HNVRRPWEQNPDKPFQYPSTLLLTA 714 (789)
Q Consensus 669 -------~e~---g~p~~~~~~-------------------~~l~~~sP~-----~~v~~~~~~~~~~~~~~pp~Li~~g 714 (789)
..+ .....+... ..+.....+ ..... ...|+|+++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~P~l~i~g 216 (272)
T 3fsg_A 147 VENKEYFADFLSMNVIINNQAWHDYQNLIIPGLQKEDKTFIDQLQNNYSFTFEEKLKNIN----------YQFPFKIMVG 216 (272)
T ss_dssp CTTGGGHHHHHHHCSEESHHHHHHHHHHTHHHHHHCCHHHHHHHTTSCSCTTHHHHTTCC----------CSSCEEEEEE
T ss_pred ccCHHHHHHHHHHhccCCCchhHHHHHHhhhhhhhccHHHHHHHhhhcCCChhhhhhhcc----------CCCCEEEEEe
Confidence 000 000011111 111111000 01223 2689999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhC
Q 003878 715 DHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 715 ~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~ 784 (789)
++|..+|+..+.++.+.+. .+++.+++++||...... ..+....+.+||.+...
T Consensus 217 ~~D~~~~~~~~~~~~~~~~--------------~~~~~~~~~~gH~~~~~~--~~~~~~~i~~fl~~~~~ 270 (272)
T 3fsg_A 217 RNDQVVGYQEQLKLINHNE--------------NGEIVLLNRTGHNLMIDQ--REAVGFHFDLFLDELNS 270 (272)
T ss_dssp TTCTTTCSHHHHHHHTTCT--------------TEEEEEESSCCSSHHHHT--HHHHHHHHHHHHHHHHC
T ss_pred CCCCcCCHHHHHHHHHhcC--------------CCeEEEecCCCCCchhcC--HHHHHHHHHHHHHHhhc
Confidence 9999999998877765443 258899999999865422 23556678889887643
No 144
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=99.51 E-value=2e-12 Score=134.27 Aligned_cols=223 Identities=13% Similarity=0.080 Sum_probs=131.0
Q ss_pred EecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccc
Q 003878 513 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 592 (789)
Q Consensus 513 ~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~ 592 (789)
+++.|| .+|.+... ++.|.||++||..+... .|... ...|.++||.|+++|.||.|.....
T Consensus 3 ~~~~~g-~~l~y~~~--------g~g~~vvllHG~~~~~~--~w~~~-~~~l~~~g~~vi~~D~~G~G~S~~~------- 63 (274)
T 1a8q_A 3 CTTRDG-VEIFYKDW--------GQGRPVVFIHGWPLNGD--AWQDQ-LKAVVDAGYRGIAHDRRGHGHSTPV------- 63 (274)
T ss_dssp EECTTS-CEEEEEEE--------CSSSEEEEECCTTCCGG--GGHHH-HHHHHHTTCEEEEECCTTSTTSCCC-------
T ss_pred EEccCC-CEEEEEec--------CCCceEEEECCCcchHH--HHHHH-HHHHHhCCCeEEEEcCCCCCCCCCC-------
Confidence 567789 88765432 23468999999765543 34443 3445558999999999998864321
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCceeEEEecCCccccccc---ccccCCc---
Q 003878 593 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGVMDMLRY---HKFTIGH--- 665 (789)
Q Consensus 593 ~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-pd~f~a~v~~~p~~d~~~~---~~~~~~~--- 665 (789)
....+++++.+-+..+++. .+.+++.++|||+||.+++.++.++ |++++++|+..+....... .......
T Consensus 64 -~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 140 (274)
T 1a8q_A 64 -WDGYDFDTFADDLNDLLTD--LDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSDKNPDGVPDEVF 140 (274)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCCCSCCBCCSSCTTSBCHHHH
T ss_pred -CCCCcHHHHHHHHHHHHHH--cCCCceEEEEeCccHHHHHHHHHHhhhHheeeeeEecCCCccccccccCcccchHHHH
Confidence 1123555555555555544 2346899999999999998877665 9999999987753211000 0000000
Q ss_pred ------------cch-----hhcCC-----CCcHHHHH----------------HHHhc---CcccCCCCCCCCCCCCCC
Q 003878 666 ------------AWV-----SDFGC-----SEEEEEFY----------------WLIKY---SPLHNVRRPWEQNPDKPF 704 (789)
Q Consensus 666 ------------~~~-----~e~g~-----p~~~~~~~----------------~l~~~---sP~~~v~~~~~~~~~~~~ 704 (789)
.+. ..++. ...++..+ .+..+ .....+.++
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--------- 211 (274)
T 1a8q_A 141 DALKNGVLTERSQFWKDTAEGFFSANRPGNKVTQGNKDAFWYMAMAQTIEGGVRCVDAFGYTDFTEDLKKF--------- 211 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTTSTTCCCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHCCCHHHHTTC---------
T ss_pred HHHHHHhhccHHHHHHHhcccccccccccccccHHHHHHHHHHhhhcChHHHHHHHhhhhcCcHHHHhhcC---------
Confidence 000 00110 01111111 11111 111223343
Q ss_pred CCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 705 QYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 705 ~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
..|+|+++|++|..+|+.+..++.+++. ...++.+++++||.......+..+..+.+.+||.
T Consensus 212 -~~P~lii~G~~D~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~gH~~~~e~~~p~~~~~~i~~fl~ 273 (274)
T 1a8q_A 212 -DIPTLVVHGDDDQVVPIDATGRKSAQII-------------PNAELKVYEGSSHGIAMVPGDKEKFNRDLLEFLN 273 (274)
T ss_dssp -CSCEEEEEETTCSSSCGGGTHHHHHHHS-------------TTCEEEEETTCCTTTTTSTTHHHHHHHHHHHHHT
T ss_pred -CCCEEEEecCcCCCCCcHHHHHHHHhhC-------------CCceEEEECCCCCceecccCCHHHHHHHHHHHhc
Confidence 6899999999999999886554443321 1247899999999876541122356677888874
No 145
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=99.51 E-value=1e-13 Score=142.64 Aligned_cols=210 Identities=10% Similarity=0.016 Sum_probs=129.9
Q ss_pred CccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCC
Q 003878 537 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 616 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d 616 (789)
..|+||++||..+.... |.. ....|. .||.|+++|+||.|....... ......+++++.+.+..+++. .+
T Consensus 19 ~~p~vv~~HG~~~~~~~--~~~-~~~~l~-~g~~v~~~D~~G~G~S~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~ 88 (269)
T 4dnp_A 19 GERVLVLAHGFGTDQSA--WNR-ILPFFL-RDYRVVLYDLVCAGSVNPDFF----DFRRYTTLDPYVDDLLHILDA--LG 88 (269)
T ss_dssp CSSEEEEECCTTCCGGG--GTT-TGGGGT-TTCEEEEECCTTSTTSCGGGC----CTTTCSSSHHHHHHHHHHHHH--TT
T ss_pred CCCEEEEEeCCCCcHHH--HHH-HHHHHh-CCcEEEEEcCCCCCCCCCCCC----CccccCcHHHHHHHHHHHHHh--cC
Confidence 45899999997665433 332 235566 499999999999876533111 111222556666666666654 24
Q ss_pred CCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccC-----------------Cccchhh----cCCCC
Q 003878 617 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTI-----------------GHAWVSD----FGCSE 675 (789)
Q Consensus 617 ~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~-----------------~~~~~~e----~g~p~ 675 (789)
.+++.++|||+||.+++.++.++|++++++|+..|............ ...|... ...+.
T Consensus 89 ~~~~~l~GhS~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (269)
T 4dnp_A 89 IDCCAYVGHSVSAMIGILASIRRPELFSKLILIGASPRFLNDEDYHGGFEQGEIEKVFSAMEANYEAWVNGFAPLAVGAD 168 (269)
T ss_dssp CCSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSCCBCBTTBCCSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCSS
T ss_pred CCeEEEEccCHHHHHHHHHHHhCcHhhceeEEeCCCCCCCChHHhccccchHHHHHHHHhccccHHHHHHHhhhhhccCC
Confidence 46899999999999999999999999999999988654322110000 0001000 00111
Q ss_pred cHHH-------------------HHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhh
Q 003878 676 EEEE-------------------FYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVL 736 (789)
Q Consensus 676 ~~~~-------------------~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 736 (789)
.++. ...+...+....+.++ ..|+|+++|++|..+|+..+.++.+.+..
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----------~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-- 236 (269)
T 4dnp_A 169 VPAAVREFSRTLFNMRPDITLFVSRTVFNSDMRGVLGLV----------KVPCHIFQTARDHSVPASVATYLKNHLGG-- 236 (269)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHTCCCGGGGGGC----------CSCEEEEEEESBTTBCHHHHHHHHHHSSS--
T ss_pred ChhHHHHHHHHHHccCcchhhhHhhhhcchhhHhhhccc----------cCCEEEEecCCCcccCHHHHHHHHHhCCC--
Confidence 1111 1111122223333343 67999999999999999988877766532
Q ss_pred ccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 737 CTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 737 ~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
.+++.+++++||....... .+....+.+||.+
T Consensus 237 -----------~~~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~ 268 (269)
T 4dnp_A 237 -----------KNTVHWLNIEGHLPHLSAP--TLLAQELRRALSH 268 (269)
T ss_dssp -----------CEEEEEEEEESSCHHHHCH--HHHHHHHHHHHC-
T ss_pred -----------CceEEEeCCCCCCccccCH--HHHHHHHHHHHhh
Confidence 2689999999998643222 3455567777754
No 146
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=99.51 E-value=2.3e-14 Score=148.55 Aligned_cols=209 Identities=11% Similarity=0.037 Sum_probs=132.6
Q ss_pred cEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 003878 539 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSR 618 (789)
Q Consensus 539 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~ 618 (789)
|+||++||..+... .|.. ....|. +||.|+++|+||.|........ .....+++++.+.+..+++. .+.+
T Consensus 29 ~~vv~lHG~~~~~~--~~~~-~~~~l~-~g~~v~~~d~~G~G~s~~~~~~----~~~~~~~~~~~~~~~~~~~~--~~~~ 98 (282)
T 3qvm_A 29 KTVLLAHGFGCDQN--MWRF-MLPELE-KQFTVIVFDYVGSGQSDLESFS----TKRYSSLEGYAKDVEEILVA--LDLV 98 (282)
T ss_dssp CEEEEECCTTCCGG--GGTT-THHHHH-TTSEEEECCCTTSTTSCGGGCC----TTGGGSHHHHHHHHHHHHHH--TTCC
T ss_pred CeEEEECCCCCCcc--hHHH-HHHHHh-cCceEEEEecCCCCCCCCCCCC----ccccccHHHHHHHHHHHHHH--cCCC
Confidence 89999999766543 3332 346677 5999999999998865432110 11223566666666666655 2447
Q ss_pred cEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccc---c---------------CCccchh-----hcCCCC
Q 003878 619 KLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKF---T---------------IGHAWVS-----DFGCSE 675 (789)
Q Consensus 619 ~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~---~---------------~~~~~~~-----e~g~p~ 675 (789)
++.++|||+||.+++.++.++|++++++|+..|.......... . ....|.. .++.+.
T Consensus 99 ~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (282)
T 3qvm_A 99 NVSIIGHSVSSIIAGIASTHVGDRISDITMICPSPCFMNFPPDYVGGFERDDLEELINLMDKNYIGWANYLAPLVMGASH 178 (282)
T ss_dssp SEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSBSBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCTTS
T ss_pred ceEEEEecccHHHHHHHHHhCchhhheEEEecCcchhccCchhhhchhccccHHHHHHHHhcchhhHHHHHHhhccCCcc
Confidence 9999999999999999999999999999999887644322100 0 0000000 011121
Q ss_pred cHHHHHH-------------------HHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhh
Q 003878 676 EEEEFYW-------------------LIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVL 736 (789)
Q Consensus 676 ~~~~~~~-------------------l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~ 736 (789)
.++..+. +........+.++ ..|+|+++|++|..+|+..+.++.+.+..
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----------~~P~l~i~g~~D~~~~~~~~~~~~~~~~~-- 246 (282)
T 3qvm_A 179 SSELIGELSGSFCTTDPIVAKTFAKATFFSDYRSLLEDI----------STPALIFQSAKDSLASPEVGQYMAENIPN-- 246 (282)
T ss_dssp CHHHHHHHHHHHHHSCHHHHHHHHHHHHSCBCGGGGGGC----------CSCEEEEEEEECTTCCHHHHHHHHHHSSS--
T ss_pred chhhHHHHHHHHhcCCcHHHHHHHHHHhcccHHHHHhcC----------CCCeEEEEeCCCCcCCHHHHHHHHHhCCC--
Confidence 1111111 1111222333333 68999999999999999888877665532
Q ss_pred ccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 737 CTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 737 ~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
.++.+++++||...... ..+....+.+||.++.
T Consensus 247 ------------~~~~~~~~~gH~~~~~~--~~~~~~~i~~fl~~~~ 279 (282)
T 3qvm_A 247 ------------SQLELIQAEGHCLHMTD--AGLITPLLIHFIQNNQ 279 (282)
T ss_dssp ------------EEEEEEEEESSCHHHHC--HHHHHHHHHHHHHHC-
T ss_pred ------------CcEEEecCCCCcccccC--HHHHHHHHHHHHHhcC
Confidence 48899999999864322 2356677888988654
No 147
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=99.51 E-value=5.6e-13 Score=138.46 Aligned_cols=118 Identities=22% Similarity=0.182 Sum_probs=81.2
Q ss_pred EecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccc
Q 003878 513 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 592 (789)
Q Consensus 513 ~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~ 592 (789)
+++.|| .+|.+... +..|.||++||..+... .|... ...|.++||.|+++|.||.|.....
T Consensus 3 ~~~~~g-~~l~y~~~--------g~~~~vvllHG~~~~~~--~~~~~-~~~L~~~g~~vi~~D~~G~G~S~~~------- 63 (273)
T 1a8s_A 3 FTTRDG-TQIYYKDW--------GSGQPIVFSHGWPLNAD--SWESQ-MIFLAAQGYRVIAHDRRGHGRSSQP------- 63 (273)
T ss_dssp EECTTS-CEEEEEEE--------SCSSEEEEECCTTCCGG--GGHHH-HHHHHHTTCEEEEECCTTSTTSCCC-------
T ss_pred EecCCC-cEEEEEEc--------CCCCEEEEECCCCCcHH--HHhhH-HhhHhhCCcEEEEECCCCCCCCCCC-------
Confidence 567789 88765432 23478999999765543 34443 3445558999999999998864321
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCceeEEEecCCc
Q 003878 593 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGV 652 (789)
Q Consensus 593 ~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-pd~f~a~v~~~p~ 652 (789)
....+++++.+-+..+++. .+.+++.++|||+||.+++.++.++ |++++++|+..+.
T Consensus 64 -~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 121 (273)
T 1a8s_A 64 -WSGNDMDTYADDLAQLIEH--LDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAV 121 (273)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred -CCCCCHHHHHHHHHHHHHH--hCCCCeEEEEeChHHHHHHHHHHhcCchheeEEEEEccc
Confidence 1224555555555555544 2446899999999999998866665 9999999887653
No 148
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=99.51 E-value=2.5e-13 Score=140.56 Aligned_cols=122 Identities=16% Similarity=0.160 Sum_probs=90.3
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.|| .+|.+..+-+ ++.|+||++||..+... .|.. ....|.++||.|+++|+||.|..... ....
T Consensus 11 ~~g-~~l~~~~~g~------~~~~~vv~~hG~~~~~~--~~~~-~~~~l~~~G~~v~~~d~~G~G~s~~~------~~~~ 74 (286)
T 3qit_A 11 FGG-NQICLCSWGS------PEHPVVLCIHGILEQGL--AWQE-VALPLAAQGYRVVAPDLFGHGRSSHL------EMVT 74 (286)
T ss_dssp ETT-EEEEEEEESC------TTSCEEEEECCTTCCGG--GGHH-HHHHHHHTTCEEEEECCTTSTTSCCC------SSGG
T ss_pred cCC-ceEEEeecCC------CCCCEEEEECCCCcccc--hHHH-HHHHhhhcCeEEEEECCCCCCCCCCC------CCCC
Confidence 478 8888877643 34589999999876543 3443 34555558999999999997754321 1113
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccc
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDM 655 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~ 655 (789)
...+++..+.+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+..|....
T Consensus 75 ~~~~~~~~~~~~~~~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~ 132 (286)
T 3qit_A 75 SYSSLTFLAQIDRVIQE--LPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPA 132 (286)
T ss_dssp GCSHHHHHHHHHHHHHH--SCSSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCCCC
T ss_pred CcCHHHHHHHHHHHHHh--cCCCCEEEEEeCHHHHHHHHHHHhChhhccEEEEecCCCCC
Confidence 44566777777766665 24468999999999999999999999999999999887654
No 149
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=99.51 E-value=1.8e-13 Score=143.34 Aligned_cols=207 Identities=13% Similarity=0.075 Sum_probs=126.3
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 615 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~ 615 (789)
++.|.||++||..+....... .....++. +||.|+++|+||.|... .....+++++.+.+..+++. .
T Consensus 41 g~~~~vv~lHG~~~~~~~~~~-~~~~~l~~-~g~~vi~~D~~G~G~s~---------~~~~~~~~~~~~~~~~~l~~--l 107 (293)
T 3hss_A 41 GTGDPVVFIAGRGGAGRTWHP-HQVPAFLA-AGYRCITFDNRGIGATE---------NAEGFTTQTMVADTAALIET--L 107 (293)
T ss_dssp CSSEEEEEECCTTCCGGGGTT-TTHHHHHH-TTEEEEEECCTTSGGGT---------TCCSCCHHHHHHHHHHHHHH--H
T ss_pred CCCCEEEEECCCCCchhhcch-hhhhhHhh-cCCeEEEEccCCCCCCC---------CcccCCHHHHHHHHHHHHHh--c
Confidence 356889999998766544331 12334455 99999999999975321 11123556665555555544 2
Q ss_pred CCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc-------------ccCCccc------hhhc-----
Q 003878 616 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK-------------FTIGHAW------VSDF----- 671 (789)
Q Consensus 616 d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~-------------~~~~~~~------~~e~----- 671 (789)
+.+++.++|+|+||.+++.++.++|++++++|+..|......... ......+ ...+
T Consensus 108 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (293)
T 3hss_A 108 DIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATRGRLDRARQFFNKAEAELYDSGVQLPPTYDARARLLENFSRKTL 187 (293)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCHHHHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHSCHHHH
T ss_pred CCCcEEEEeeCccHHHHHHHHHHChHHHHhhheecccccCChhhhHHHHHHHHHHhhcccchhhHHHHHHHhhhcccccc
Confidence 346899999999999999999999999999999988654321110 0000000 0000
Q ss_pred CCCCcHHHH---------------HHHHhc----CcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHH
Q 003878 672 GCSEEEEEF---------------YWLIKY----SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATM 732 (789)
Q Consensus 672 g~p~~~~~~---------------~~l~~~----sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L 732 (789)
..+.....+ ...... .....+.++ ..|+|+++|++|..+|+..+.++.+.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~P~lii~g~~D~~~~~~~~~~~~~~~ 257 (293)
T 3hss_A 188 NDDVAVGDWIAMFSMWPIKSTPGLRCQLDCAPQTNRLPAYRNI----------AAPVLVIGFADDVVTPPYLGREVADAL 257 (293)
T ss_dssp TCHHHHHHHHHHHHHSCCCCCHHHHHHHTSSCSSCCHHHHTTC----------CSCEEEEEETTCSSSCHHHHHHHHHHS
T ss_pred cccccHHHHHHHHhhccccccHHHHhHhhhccccchHHHHhhC----------CCCEEEEEeCCCCCCCHHHHHHHHHHC
Confidence 000000000 000000 111122233 679999999999999999888777665
Q ss_pred HHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 733 QYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
.. +++.+++++||....... .+....+.+||.+
T Consensus 258 ~~--------------~~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~ 290 (293)
T 3hss_A 258 PN--------------GRYLQIPDAGHLGFFERP--EAVNTAMLKFFAS 290 (293)
T ss_dssp TT--------------EEEEEETTCCTTHHHHSH--HHHHHHHHHHHHT
T ss_pred CC--------------ceEEEeCCCcchHhhhCH--HHHHHHHHHHHHh
Confidence 42 478999999998643222 3455677788764
No 150
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=99.51 E-value=5.3e-13 Score=137.27 Aligned_cols=219 Identities=13% Similarity=0.086 Sum_probs=127.6
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCc
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 596 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~ 596 (789)
+| .+|.+...- .+ .|.||++||..+.. ...|.. ....|.++||.|+++|+||.|..... ......
T Consensus 10 ~g-~~l~~~~~g------~~-~~~vvllHG~~~~~-~~~~~~-~~~~l~~~g~~vi~~D~~G~G~S~~~-----~~~~~~ 74 (254)
T 2ocg_A 10 NG-VQLHYQQTG------EG-DHAVLLLPGMLGSG-ETDFGP-QLKNLNKKLFTVVAWDPRGYGHSRPP-----DRDFPA 74 (254)
T ss_dssp TT-EEEEEEEEE------CC-SEEEEEECCTTCCH-HHHCHH-HHHHSCTTTEEEEEECCTTSTTCCSS-----CCCCCT
T ss_pred CC-EEEEEEEec------CC-CCeEEEECCCCCCC-ccchHH-HHHHHhhCCCeEEEECCCCCCCCCCC-----CCCCCh
Confidence 78 777654431 12 36799999976541 122443 34556558999999999998764321 011111
Q ss_pred chH-HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccc-----ccccCCccchh-
Q 003878 597 NCF-DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY-----HKFTIGHAWVS- 669 (789)
Q Consensus 597 ~~~-~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~-----~~~~~~~~~~~- 669 (789)
..+ +|+.++++++...+ .+++.++|||+||.+++.++.++|++++++|+..|...+... ........|..
T Consensus 75 ~~~~~~~~~~~~~l~~l~---~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (254)
T 2ocg_A 75 DFFERDAKDAVDLMKALK---FKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGANAYVTDEDSMIYEGIRDVSKWSER 151 (254)
T ss_dssp THHHHHHHHHHHHHHHTT---CSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEESCCSBCCHHHHHHHHTTSCGGGSCHH
T ss_pred HHHHHHHHHHHHHHHHhC---CCCEEEEEECHhHHHHHHHHHHChHHhhheeEeccccccChhhHHHHHHHHHHHHHHHH
Confidence 113 34444555554443 368999999999999999999999999999987764322100 00000001100
Q ss_pred -------hcCCCCcH----HHHHHHHhcC-------cccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHH
Q 003878 670 -------DFGCSEEE----EEFYWLIKYS-------PLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLAT 731 (789)
Q Consensus 670 -------e~g~p~~~----~~~~~l~~~s-------P~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~ 731 (789)
.++..... ...+.+..+. ....+.++ ..|+|+++|++|..+|+..+.++.+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~P~lii~G~~D~~~~~~~~~~~~~~ 221 (254)
T 2ocg_A 152 TRKPLEALYGYDYFARTCEKWVDGIRQFKHLPDGNICRHLLPRV----------QCPALIVHGEKDPLVPRFHADFIHKH 221 (254)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHHGGGGSGGGBSSGGGGGGC----------CSCEEEEEETTCSSSCHHHHHHHHHH
T ss_pred hHHHHHHHhcchhhHHHHHHHHHHHHHHHhccCCchhhhhhhcc----------cCCEEEEecCCCccCCHHHHHHHHHh
Confidence 11110000 0011111111 01122233 68999999999999999888777665
Q ss_pred HHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHH
Q 003878 732 MQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFM 779 (789)
Q Consensus 732 L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl 779 (789)
+.. .++.+++++||....... .+..+.+.+||
T Consensus 222 ~~~--------------~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl 253 (254)
T 2ocg_A 222 VKG--------------SRLHLMPEGKHNLHLRFA--DEFNKLAEDFL 253 (254)
T ss_dssp STT--------------CEEEEETTCCTTHHHHTH--HHHHHHHHHHH
T ss_pred CCC--------------CEEEEcCCCCCchhhhCH--HHHHHHHHHHh
Confidence 543 378889999998643222 34555667776
No 151
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged active site, prolyl peptidase; 1.80A {Thermoplasma acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A 1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A* 1xqx_A* 1xqy_A 1xqv_A
Probab=99.50 E-value=2e-13 Score=143.52 Aligned_cols=122 Identities=20% Similarity=0.142 Sum_probs=80.1
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.+| .++.+...-+ ..+.|.||++||+++.... .+. ....++. +||.|+++|.||.|..... ...
T Consensus 12 ~~g-~~l~~~~~g~-----~~~~~~vvllHG~~~~~~~-~~~-~~~~l~~-~g~~vi~~D~~G~G~S~~~-------~~~ 75 (293)
T 1mtz_A 12 VNG-IYIYYKLCKA-----PEEKAKLMTMHGGPGMSHD-YLL-SLRDMTK-EGITVLFYDQFGCGRSEEP-------DQS 75 (293)
T ss_dssp ETT-EEEEEEEECC-----SSCSEEEEEECCTTTCCSG-GGG-GGGGGGG-GTEEEEEECCTTSTTSCCC-------CGG
T ss_pred ECC-EEEEEEEECC-----CCCCCeEEEEeCCCCcchh-HHH-HHHHHHh-cCcEEEEecCCCCccCCCC-------CCC
Confidence 368 7776554321 1123779999998765432 222 2334444 8999999999998764321 011
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccc
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 654 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d 654 (789)
..+++++.+.+..+++.- ...+++.++|||+||.+++.++.++|++++++|+..|...
T Consensus 76 ~~~~~~~~~dl~~~~~~l-~~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~ 133 (293)
T 1mtz_A 76 KFTIDYGVEEAEALRSKL-FGNEKVFLMGSSYGGALALAYAVKYQDHLKGLIVSGGLSS 133 (293)
T ss_dssp GCSHHHHHHHHHHHHHHH-HTTCCEEEEEETHHHHHHHHHHHHHGGGEEEEEEESCCSB
T ss_pred cccHHHHHHHHHHHHHHh-cCCCcEEEEEecHHHHHHHHHHHhCchhhheEEecCCccC
Confidence 134455544444444331 0225899999999999999999999999999999888655
No 152
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.50 E-value=2.9e-13 Score=161.39 Aligned_cols=289 Identities=11% Similarity=0.005 Sum_probs=169.8
Q ss_pred eEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeE
Q 003878 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFF 215 (789)
Q Consensus 136 ~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 215 (789)
+++|||||+++ ++. .. .+|++||+++|+..... ..... . .. -..++.+.|+++ +
T Consensus 20 ~~~~s~dg~~~-~~~-~d----~~i~~~~~~~g~~~~~~-~~~~~--~-~~-----~~~~~~~SpDg~-----------~ 73 (719)
T 1z68_A 20 FPNWISGQEYL-HQS-AD----NNIVLYNIETGQSYTIL-SNRTM--K-SV-----NASNYGLSPDRQ-----------F 73 (719)
T ss_dssp CCEESSSSEEE-EEC-TT----SCEEEEESSSCCEEEEE-CHHHH--H-TT-----TCSEEEECTTSS-----------E
T ss_pred ccEECCCCeEE-EEc-CC----CCEEEEEcCCCcEEEEE-ccccc--c-cc-----ceeeEEECCCCC-----------e
Confidence 57899999644 332 12 37999999999754311 11000 0 00 023466779997 6
Q ss_pred EEeeecccc------ceeeeeeec---cc--------ccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEE
Q 003878 216 YLFSLVKST------IYSFWSVVS---QF--------KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFY 278 (789)
Q Consensus 216 ~~~~s~~~g------~~~l~~~~~---~~--------~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 278 (789)
++|.++.++ ..+||..+. .. ....++|||||+.|+|++. .+|+
T Consensus 74 la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~~~~~~~~~SPDG~~la~~~~--------------------~~i~ 133 (719)
T 1z68_A 74 VYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELPRPIQYLCWSPVGSKLAYVYQ--------------------NNIY 133 (719)
T ss_dssp EEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCCSSBCCEEECSSTTCEEEEET--------------------TEEE
T ss_pred EEEEecCceeEEeecceEEEEEECCCCccccceecCcccccceECCCCCEEEEEEC--------------------CeEE
Confidence 777776432 234443333 11 2467999999999999842 2589
Q ss_pred EEECCCCCCCcEEEEecCCCC-e---------------eEEEEEEecCCcEEEEEEEcCCC-------------------
Q 003878 279 YHFLGTKQSEDILCWKDPEHP-K---------------YIFSGHVTEDGQYLVMCIEENCD------------------- 323 (789)
Q Consensus 279 ~~~lg~~~~~~~~~~~~~~~~-~---------------~~~~~~~SpDG~~l~~~~~~~~~------------------- 323 (789)
++++.++... .+....... . ...++.|||||++|++.+.+...
T Consensus 134 ~~~~~~g~~~--~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 211 (719)
T 1z68_A 134 LKQRPGDPPF--QITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTIN 211 (719)
T ss_dssp EESSTTSCCE--ECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEE
T ss_pred EEeCCCCCcE--EEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCcccee
Confidence 9988765432 111111000 0 01268999999999998765321
Q ss_pred ----------CceEEEEEECCCCCCCcccccccCCCCccEeee------ccc-cceeEEEecCCCEEEEEECCCCCCceE
Q 003878 324 ----------PVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI------DGF-DAQYEVIANDDTVFTFLTNKDAPKYKI 386 (789)
Q Consensus 324 ----------~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~------~~~-~~~~~~~s~dG~~l~~~tn~~~~~~~L 386 (789)
....|+++|++++.. .....+. ... ......|||||+.++...++.....+|
T Consensus 212 ~~yp~~g~~~~~~~l~~~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l 280 (719)
T 1z68_A 212 IPYPKAGAKNPVVRIFIIDTTYPAY-----------VGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVL 280 (719)
T ss_dssp EECCBTTSCCCEEEEEEEESSCHHH-----------HCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEE
T ss_pred ecCCCCCCCCCeeEEEEEECCCCCc-----------cceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEE
Confidence 234789999887420 0000111 111 112245999976555545555556789
Q ss_pred EEEE----CCCCCCeEEecc---CCCCceee-----eEEEecCCE-EEE-EEEeCCeEEEEEEECCCCceeeecccCCee
Q 003878 387 IRVD----LKEPNDWFEVIP---EAERDVLE-----SATAVNLNQ-MIV-SYLSDVKYVLQIRDLKNGSLLHQLPIEIGS 452 (789)
Q Consensus 387 ~~~d----l~~~~~~~~l~~---~~~~~~i~-----~v~~~~~~~-lv~-~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~ 452 (789)
+++| +++++ .+.+++ ......+. .+.|++++. +++ ....++..+|+++++++++. +.++.+...
T Consensus 281 ~~~d~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~~-~~lt~~~~~ 358 (719)
T 1z68_A 281 SICDFREDWQTWD-CPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTVENA-IQITSGKWE 358 (719)
T ss_dssp EEEEECSSSSSEE-CCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCSTTC-EECSCSSSC
T ss_pred EEEcccCCCCCCc-eEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCCCce-EecccCceE
Confidence 9999 77664 344442 22223343 677888644 444 45567788999999986664 677655555
Q ss_pred EEEeecccCCcEEEEEEcC---CCCCcEEEEEECCCC
Q 003878 453 VNAISARREDSVVFISFTS---FLIPGIVYQCNLKTE 486 (789)
Q Consensus 453 v~~~s~s~d~~~l~~~~ss---~~~P~~ly~~dl~tg 486 (789)
+..+.++ +++.++++.+. ...-..+|.+++.++
T Consensus 359 v~~~~~~-d~~~i~~~~~~~~~~~~~~~l~~~~~~~g 394 (719)
T 1z68_A 359 AINIFRV-TQDSLFYSSNEFEEYPGRRNIYRISIGSY 394 (719)
T ss_dssp EEEEEEE-CSSEEEEEESCGGGCTTCBEEEEEECSSS
T ss_pred EEEEEEE-eCCEEEEEEecCCCCCceEEEEEEeCCCC
Confidence 5555555 88888877643 123356788887655
No 153
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MES; 2.25A {Pseudomonas aeruginosa} SCOP: c.69.1.0
Probab=99.49 E-value=4.7e-13 Score=139.25 Aligned_cols=221 Identities=13% Similarity=0.044 Sum_probs=133.8
Q ss_pred EEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhccc
Q 003878 512 FVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGA 591 (789)
Q Consensus 512 ~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~ 591 (789)
.+...|| .+|.+...-+ +..|+||++||...... .|... ...|. ++|.|+++|.||.|....
T Consensus 8 ~~~~~~g-~~l~y~~~G~------~~~p~lvl~hG~~~~~~--~w~~~-~~~L~-~~~~vi~~D~rG~G~S~~------- 69 (266)
T 3om8_A 8 FLATSDG-ASLAYRLDGA------AEKPLLALSNSIGTTLH--MWDAQ-LPALT-RHFRVLRYDARGHGASSV------- 69 (266)
T ss_dssp EEECTTS-CEEEEEEESC------TTSCEEEEECCTTCCGG--GGGGG-HHHHH-TTCEEEEECCTTSTTSCC-------
T ss_pred EEeccCC-cEEEEEecCC------CCCCEEEEeCCCccCHH--HHHHH-HHHhh-cCcEEEEEcCCCCCCCCC-------
Confidence 3566799 8887765422 23588999999765433 34443 45666 689999999999886432
Q ss_pred ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccc---------c-c-
Q 003878 592 LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY---------H-K- 660 (789)
Q Consensus 592 ~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~---------~-~- 660 (789)
.....+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..+...+... . .
T Consensus 70 -~~~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~rv~~lvl~~~~~~~~~~~~~~~~~~~~~~~ 146 (266)
T 3om8_A 70 -PPGPYTLARLGEDVLELLDA--LEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTSAWLGPAAQWDERIAAVLQA 146 (266)
T ss_dssp -CCSCCCHHHHHHHHHHHHHH--TTCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSBCCCSHHHHHHHHHHHHC
T ss_pred -CCCCCCHHHHHHHHHHHHHH--hCCCceEEEEEChHHHHHHHHHHhChHhhheeeEecCcccCCchhHHHHHHHHHHcc
Confidence 11234566666655555554 23358999999999999999999999999999987653211100 0 0
Q ss_pred ccCC-------ccchh-hc--CCCCcHHHH----------------HHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEec
Q 003878 661 FTIG-------HAWVS-DF--GCSEEEEEF----------------YWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTA 714 (789)
Q Consensus 661 ~~~~-------~~~~~-e~--g~p~~~~~~----------------~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g 714 (789)
.... ..|.. .+ ..+...+.+ ..+........+.++ ..|+|+++|
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~i----------~~P~Lvi~G 216 (266)
T 3om8_A 147 EDMSETAAGFLGNWFPPALLERAEPVVERFRAMLMATNRHGLAGSFAAVRDTDLRAQLARI----------ERPTLVIAG 216 (266)
T ss_dssp SSSHHHHHHHHHHHSCHHHHHSCCHHHHHHHHHHHTSCHHHHHHHHHHHHTCBCTTTGGGC----------CSCEEEEEE
T ss_pred ccHHHHHHHHHHHhcChhhhhcChHHHHHHHHHHHhCCHHHHHHHHHHhhccchhhHhcCC----------CCCEEEEEe
Confidence 0000 00000 00 011000111 011111111222333 689999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 715 DHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 715 ~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
++|..+|+..+..+.+.+... ++.+++ +||....... .+..+.+.+||.
T Consensus 217 ~~D~~~~~~~~~~l~~~ip~a--------------~~~~i~-~gH~~~~e~p--~~~~~~i~~Fl~ 265 (266)
T 3om8_A 217 AYDTVTAASHGELIAASIAGA--------------RLVTLP-AVHLSNVEFP--QAFEGAVLSFLG 265 (266)
T ss_dssp TTCSSSCHHHHHHHHHHSTTC--------------EEEEES-CCSCHHHHCH--HHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHhCCCC--------------EEEEeC-CCCCccccCH--HHHHHHHHHHhc
Confidence 999999999988887766543 677776 7997643322 345566777773
No 154
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=99.49 E-value=2.8e-14 Score=147.72 Aligned_cols=214 Identities=12% Similarity=0.033 Sum_probs=127.4
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 615 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~ 615 (789)
++.|+||++||..+... .|......++. +||.|+++|+||.|...... ......+++|+.+.+..+++. .
T Consensus 22 ~~~~~vv~lHG~~~~~~--~~~~~~~~l~~-~g~~v~~~d~~G~G~s~~~~-----~~~~~~~~~~~~~~~~~~~~~--~ 91 (279)
T 4g9e_A 22 GEGAPLLMIHGNSSSGA--IFAPQLEGEIG-KKWRVIAPDLPGHGKSTDAI-----DPDRSYSMEGYADAMTEVMQQ--L 91 (279)
T ss_dssp CCEEEEEEECCTTCCGG--GGHHHHHSHHH-HHEEEEEECCTTSTTSCCCS-----CHHHHSSHHHHHHHHHHHHHH--H
T ss_pred CCCCeEEEECCCCCchh--HHHHHHhHHHh-cCCeEEeecCCCCCCCCCCC-----CcccCCCHHHHHHHHHHHHHH--h
Confidence 35689999999876533 34443344465 89999999999987643210 011123566666666666654 2
Q ss_pred CCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccc----cc---------cCCc----cchh-hcCCCCcH
Q 003878 616 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH----KF---------TIGH----AWVS-DFGCSEEE 677 (789)
Q Consensus 616 d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~----~~---------~~~~----~~~~-e~g~p~~~ 677 (789)
+.+++.++|+|+||.+++.++.++|++.+.+++..|........ .. .... .+.. .+..+..+
T Consensus 92 ~~~~~~lvG~S~Gg~~a~~~a~~~p~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (279)
T 4g9e_A 92 GIADAVVFGWSLGGHIGIEMIARYPEMRGLMITGTPPVAREEVGQGFKSGPDMALAGQEIFSERDVESYARSTCGEPFEA 171 (279)
T ss_dssp TCCCCEEEEETHHHHHHHHHTTTCTTCCEEEEESCCCCCGGGHHHHBCCSTTGGGGGCSCCCHHHHHHHHHHHHCSSCCH
T ss_pred CCCceEEEEECchHHHHHHHHhhCCcceeEEEecCCCCCCCccchhhccchhhhhcCcccccHHHHHHHHHhhccCcccH
Confidence 34589999999999999999999999555555555543321110 00 0000 0000 11222222
Q ss_pred HHHHHHHhcCc------------------ccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHH-HHHHHhhcc
Q 003878 678 EEFYWLIKYSP------------------LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLL-ATMQYVLCT 738 (789)
Q Consensus 678 ~~~~~l~~~sP------------------~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~-~~L~~~~~~ 738 (789)
...+.+....+ ...+..+ ..|+|+++|++|..||++.+.++. +.+.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i----------~~P~l~i~g~~D~~~~~~~~~~~~~~~~~----- 236 (279)
T 4g9e_A 172 SLLDIVARTDGRARRIMFEKFGSGTGGNQRDIVAEA----------QLPIAVVNGRDEPFVELDFVSKVKFGNLW----- 236 (279)
T ss_dssp HHHHHHHHSCHHHHHHHHHHHHHTCBCCHHHHHHHC----------CSCEEEEEETTCSSBCHHHHTTCCCSSBG-----
T ss_pred HHHHHHHhhhccchHHHHHHhhccCCchHHHHHHhc----------CCCEEEEEcCCCcccchHHHHHHhhccCC-----
Confidence 22111211110 0111222 579999999999999988776664 3222
Q ss_pred CCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 739 SLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 739 ~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
.+++.+++++||....... .+..+.+.+||.+.-+.
T Consensus 237 ---------~~~~~~~~~~gH~~~~~~p--~~~~~~i~~fl~~~~~~ 272 (279)
T 4g9e_A 237 ---------EGKTHVIDNAGHAPFREAP--AEFDAYLARFIRDCTQL 272 (279)
T ss_dssp ---------GGSCEEETTCCSCHHHHSH--HHHHHHHHHHHHHHHSS
T ss_pred ---------CCeEEEECCCCcchHHhCH--HHHHHHHHHHHHHhhhh
Confidence 2367889999998543222 35667889999887544
No 155
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=99.49 E-value=5.1e-13 Score=140.47 Aligned_cols=225 Identities=12% Similarity=0.027 Sum_probs=136.6
Q ss_pred EEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcc
Q 003878 511 VFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG 590 (789)
Q Consensus 511 ~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~ 590 (789)
..+...+| .++.+...-|+ ..|.||++||..+.... .|.. ....|+ +||.|+++|.||.|.....
T Consensus 5 ~~~~~~~g-~~l~~~~~G~~------~~~~vvllHG~~~~~~~-~w~~-~~~~L~-~~~~vi~~Dl~G~G~S~~~----- 69 (286)
T 2yys_A 5 IGYVPVGE-AELYVEDVGPV------EGPALFVLHGGPGGNAY-VLRE-GLQDYL-EGFRVVYFDQRGSGRSLEL----- 69 (286)
T ss_dssp EEEEECSS-CEEEEEEESCT------TSCEEEEECCTTTCCSH-HHHH-HHGGGC-TTSEEEEECCTTSTTSCCC-----
T ss_pred eeEEeECC-EEEEEEeecCC------CCCEEEEECCCCCcchh-HHHH-HHHHhc-CCCEEEEECCCCCCCCCCC-----
Confidence 34455688 88877655331 34789999998765431 2333 344565 7999999999998764310
Q ss_pred cccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccc-cc-------c
Q 003878 591 ALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH-KF-------T 662 (789)
Q Consensus 591 ~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~-~~-------~ 662 (789)
.......+++++.+.+..+++. ...+++.++|||+||.+++.++.++|+ ++++|+..|..++.... .. .
T Consensus 70 ~~~~~~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~-v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 146 (286)
T 2yys_A 70 PQDPRLFTVDALVEDTLLLAEA--LGVERFGLLAHGFGAVVALEVLRRFPQ-AEGAILLAPWVNFPWLAARLAEAAGLAP 146 (286)
T ss_dssp CSCGGGCCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHCTT-EEEEEEESCCCBHHHHHHHHHHHTTCCC
T ss_pred ccCcccCcHHHHHHHHHHHHHH--hCCCcEEEEEeCHHHHHHHHHHHhCcc-hheEEEeCCccCcHHHHHHHHHHhcccc
Confidence 0000134566666666666654 234689999999999999999999999 99999988764321100 00 0
Q ss_pred --------------CC-ccchhh--cCCCC---cHHHH-------------HH--HHh---cCcccCCCCCCCCCCCCCC
Q 003878 663 --------------IG-HAWVSD--FGCSE---EEEEF-------------YW--LIK---YSPLHNVRRPWEQNPDKPF 704 (789)
Q Consensus 663 --------------~~-~~~~~e--~g~p~---~~~~~-------------~~--l~~---~sP~~~v~~~~~~~~~~~~ 704 (789)
.. ..+... +..+. ..+.. .. +.. +.....+.++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i--------- 217 (286)
T 2yys_A 147 LPDPEENLKEALKREEPKALFDRLMFPTPRGRMAYEWLAEGAGILGSDAPGLAFLRNGLWRLDYTPYLTPE--------- 217 (286)
T ss_dssp CSCHHHHHHHHHHHSCHHHHHHHHHCSSHHHHHHHHHHHHHTTCCCCSHHHHHHHHTTGGGCBCGGGCCCC---------
T ss_pred chhHHHHHHHHhccCChHHHHHhhhccCCccccChHHHHHHHhhccccccchhhcccccccCChhhhhhhc---------
Confidence 00 000000 00000 00000 00 011 1111122332
Q ss_pred CCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 705 QYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 705 ~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
..|+|+++|++|..+++. +.++.+ +... ++.+++++||....... .+..+.+.+||.+
T Consensus 218 -~~P~lvi~G~~D~~~~~~-~~~~~~-~~~~--------------~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 275 (286)
T 2yys_A 218 -RRPLYVLVGERDGTSYPY-AEEVAS-RLRA--------------PIRVLPEAGHYLWIDAP--EAFEEAFKEALAA 275 (286)
T ss_dssp -SSCEEEEEETTCTTTTTT-HHHHHH-HHTC--------------CEEEETTCCSSHHHHCH--HHHHHHHHHHHHT
T ss_pred -CCCEEEEEeCCCCcCCHh-HHHHHh-CCCC--------------CEEEeCCCCCCcChhhH--HHHHHHHHHHHHh
Confidence 679999999999999999 888877 6543 57889999998643322 3566778888875
No 156
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=99.49 E-value=2.1e-13 Score=148.83 Aligned_cols=115 Identities=15% Similarity=0.101 Sum_probs=78.4
Q ss_pred ccEEEEEcCCCCccCCC-------CCCHHHH--HHHHcCCeEEEEEeecC-CCC-CChhHHhc--cc---ccCCcchHHH
Q 003878 538 HPCLLYGYGGFNISVTP-------SFSVSRT--ILMRHLGAVFCIANIRG-GGE-YGEEWHKG--GA---LAKKQNCFDD 601 (789)
Q Consensus 538 ~P~ll~~hGg~~~~~~~-------~~~~~~~--~~l~~~G~~v~~~~~RG-~g~-~g~~~~~~--~~---~~~~~~~~~D 601 (789)
.|+||++||..+..... .|..... ..|+++||.|+++|+|| .|+ .+..-... +. ......+++|
T Consensus 59 ~~~vvllHG~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~~vi~~D~~G~~g~s~~~~~~~~~~g~~~~~~~~~~~~~~ 138 (377)
T 2b61_A 59 NNAVLICHALTGDAEPYFDDGRDGWWQNFMGAGLALDTDRYFFISSNVLGGCKGTTGPSSINPQTGKPYGSQFPNIVVQD 138 (377)
T ss_dssp CCEEEEECCTTCCSCSCCSSSCCCTTGGGEETTSSEETTTCEEEEECCTTCSSSSSCTTSBCTTTSSBCGGGCCCCCHHH
T ss_pred CCeEEEeCCCCCccccccccccchhhhhccCcccccccCCceEEEecCCCCCCCCCCCcccCccccccccccCCcccHHH
Confidence 58999999987765441 1332211 12534899999999999 343 22210000 00 0011356788
Q ss_pred HHHHHHHHHHcCCCCCCcEE-EEeeChHHHHHHHHHHhCCCceeEEEecCCccc
Q 003878 602 FISASEYLISAGYTQSRKLC-IEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 654 (789)
Q Consensus 602 ~~~~~~~L~~~~~~d~~~i~-i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d 654 (789)
+.+.+..+++. .+.+++. ++|+|+||.+++.++.++|++++++|+..|...
T Consensus 139 ~~~~l~~~l~~--l~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 190 (377)
T 2b61_A 139 IVKVQKALLEH--LGISHLKAIIGGSFGGMQANQWAIDYPDFMDNIVNLCSSIY 190 (377)
T ss_dssp HHHHHHHHHHH--TTCCCEEEEEEETHHHHHHHHHHHHSTTSEEEEEEESCCSS
T ss_pred HHHHHHHHHHH--cCCcceeEEEEEChhHHHHHHHHHHCchhhheeEEeccCcc
Confidence 88888887765 3446888 999999999999999999999999999888543
No 157
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT peroxidase, oxidoreductase; 1.74A {Bacillus anthracis str} SCOP: c.69.1.0
Probab=99.49 E-value=1.1e-12 Score=137.39 Aligned_cols=117 Identities=17% Similarity=0.070 Sum_probs=77.7
Q ss_pred ecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhccccc
Q 003878 514 PSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA 593 (789)
Q Consensus 514 ~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~ 593 (789)
...+| .+|.+... ++.|.||++||..+....+. .....+.+ +||.|+++|.||.|.....
T Consensus 12 ~~~~g-~~l~y~~~--------G~g~~vvllHG~~~~~~~w~--~~~~~l~~-~g~~vi~~D~~G~G~S~~~-------- 71 (281)
T 3fob_A 12 ENQAP-IEIYYEDH--------GTGKPVVLIHGWPLSGRSWE--YQVPALVE-AGYRVITYDRRGFGKSSQP-------- 71 (281)
T ss_dssp ETTEE-EEEEEEEE--------SSSEEEEEECCTTCCGGGGT--TTHHHHHH-TTEEEEEECCTTSTTSCCC--------
T ss_pred CCCCc-eEEEEEEC--------CCCCeEEEECCCCCcHHHHH--HHHHHHHh-CCCEEEEeCCCCCCCCCCC--------
Confidence 34567 66654332 23466888999877654433 33334444 8999999999998864321
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHh-CCCceeEEEecCCc
Q 003878 594 KKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQ-RPDLFGCALAHVGV 652 (789)
Q Consensus 594 ~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~-~pd~f~a~v~~~p~ 652 (789)
....+++++.+-+..+++. ...+++.++|||+||.+++.++.+ +|++++++|+..+.
T Consensus 72 ~~~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~GG~i~~~~~a~~~p~~v~~lvl~~~~ 129 (281)
T 3fob_A 72 WEGYEYDTFTSDLHQLLEQ--LELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAV 129 (281)
T ss_dssp SSCCSHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHHCSTTEEEEEEESCC
T ss_pred ccccCHHHHHHHHHHHHHH--cCCCcEEEEEECccHHHHHHHHHHccccceeEEEEecCC
Confidence 1234566666656666554 234689999999999877765554 58999999887654
No 158
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A {Streptomyces lividans} SCOP: c.69.1.12
Probab=99.49 E-value=1.5e-12 Score=135.41 Aligned_cols=120 Identities=18% Similarity=0.162 Sum_probs=81.6
Q ss_pred EecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccc
Q 003878 513 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 592 (789)
Q Consensus 513 ~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~ 592 (789)
+++.|| .+|.+...-|+ +.|.||++||..+... .|... ...|.++||.|+++|.||.|.....
T Consensus 3 ~~~~~g-~~l~y~~~g~~------~~~~vvllHG~~~~~~--~w~~~-~~~l~~~g~~vi~~D~~G~G~S~~~------- 65 (275)
T 1a88_A 3 VTTSDG-TNIFYKDWGPR------DGLPVVFHHGWPLSAD--DWDNQ-MLFFLSHGYRVIAHDRRGHGRSDQP------- 65 (275)
T ss_dssp EECTTS-CEEEEEEESCT------TSCEEEEECCTTCCGG--GGHHH-HHHHHHTTCEEEEECCTTSTTSCCC-------
T ss_pred EEccCC-CEEEEEEcCCC------CCceEEEECCCCCchh--hHHHH-HHHHHHCCceEEEEcCCcCCCCCCC-------
Confidence 566789 88876554322 3478999999765433 34443 3445558999999999998864321
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCceeEEEecCCc
Q 003878 593 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGV 652 (789)
Q Consensus 593 ~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-pd~f~a~v~~~p~ 652 (789)
....+++++.+.+..+++. ...+++.++|||+||.+++.++.++ |++++++|+..+.
T Consensus 66 -~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 123 (275)
T 1a88_A 66 -STGHDMDTYAADVAALTEA--LDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAV 123 (275)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHSCTTSEEEEEEESCC
T ss_pred -CCCCCHHHHHHHHHHHHHH--cCCCceEEEEeccchHHHHHHHHHhCchheEEEEEecCC
Confidence 1123455555444444443 2335899999999999998877776 9999999987754
No 159
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=99.48 E-value=4.6e-13 Score=139.09 Aligned_cols=219 Identities=13% Similarity=0.049 Sum_probs=133.8
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.+| .+|.+...-+.+ .+.|.||++||..+... .|... ...|. .+|.|+++|.||.|..... ..
T Consensus 9 ~~g-~~l~y~~~g~~~----~~~~~vvllHG~~~~~~--~~~~~-~~~L~-~~~~vi~~D~~G~G~S~~~--------~~ 71 (266)
T 2xua_A 9 VNG-TELHYRIDGERH----GNAPWIVLSNSLGTDLS--MWAPQ-VAALS-KHFRVLRYDTRGHGHSEAP--------KG 71 (266)
T ss_dssp CSS-SEEEEEEESCSS----SCCCEEEEECCTTCCGG--GGGGG-HHHHH-TTSEEEEECCTTSTTSCCC--------SS
T ss_pred ECC-EEEEEEEcCCcc----CCCCeEEEecCccCCHH--HHHHH-HHHHh-cCeEEEEecCCCCCCCCCC--------CC
Confidence 478 888776653321 12589999999655433 34433 34566 6799999999998764321 12
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccc---ccc----c-c--CC-
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR---YHK----F-T--IG- 664 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~---~~~----~-~--~~- 664 (789)
..+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..|...... ... . . ..
T Consensus 72 ~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (266)
T 2xua_A 72 PYTIEQLTGDVLGLMDT--LKIARANFCGLSMGGLTGVALAARHADRIERVALCNTAARIGSPEVWVPRAVKARTEGMHA 149 (266)
T ss_dssp CCCHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCSCHHHHHHHHHHHHHHCHHH
T ss_pred CCCHHHHHHHHHHHHHh--cCCCceEEEEECHHHHHHHHHHHhChhhhheeEEecCCCCCCchHHHHHHHHHHHhcChHH
Confidence 34566666666655554 2335899999999999999999999999999998876432200 000 0 0 00
Q ss_pred --ccchhhcCCC----CcHH---------------HH----HHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCC
Q 003878 665 --HAWVSDFGCS----EEEE---------------EF----YWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDR 719 (789)
Q Consensus 665 --~~~~~e~g~p----~~~~---------------~~----~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~ 719 (789)
......|-.+ .+++ .+ ..+..+.....+.++ ..|+|+++|++|..
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~P~lvi~G~~D~~ 219 (266)
T 2xua_A 150 LADAVLPRWFTADYMEREPVVLAMIRDVFVHTDKEGYASNCEAIDAADLRPEAPGI----------KVPALVISGTHDLA 219 (266)
T ss_dssp HHHHHHHHHSCHHHHHHCHHHHHHHHHHHHTSCHHHHHHHHHHHHHCCCGGGGGGC----------CSCEEEEEETTCSS
T ss_pred HHHHHHHHHcCcccccCCHHHHHHHHHHHhhCCHHHHHHHHHHHhccCchhhhccC----------CCCEEEEEcCCCCc
Confidence 0000011000 0111 11 111222222233333 68999999999999
Q ss_pred CCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 720 VVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 720 V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
+|+..+.++.+.+.. .++.+++ +||....... .+..+.+.+||.
T Consensus 220 ~~~~~~~~~~~~~~~--------------~~~~~~~-~gH~~~~e~p--~~~~~~i~~fl~ 263 (266)
T 2xua_A 220 ATPAQGRELAQAIAG--------------ARYVELD-ASHISNIERA--DAFTKTVVDFLT 263 (266)
T ss_dssp SCHHHHHHHHHHSTT--------------CEEEEES-CCSSHHHHTH--HHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhCCC--------------CEEEEec-CCCCchhcCH--HHHHHHHHHHHH
Confidence 999888777665543 2788899 9998643222 345567778874
No 160
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=99.47 E-value=2.5e-13 Score=139.54 Aligned_cols=209 Identities=18% Similarity=0.200 Sum_probs=122.9
Q ss_pred ccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcch-HHHHHHHHHHHHHcCCCC
Q 003878 538 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNC-FDDFISASEYLISAGYTQ 616 (789)
Q Consensus 538 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~-~~D~~~~~~~L~~~~~~d 616 (789)
.|.||++||..+... .|.. ....|.++||.|+++|.||.|..... . ....... .+|+.+++++|.+.+.
T Consensus 16 ~~~vvllHG~~~~~~--~~~~-~~~~L~~~g~~vi~~D~~GhG~s~~~---~--~~~~~~~~~~d~~~~~~~l~~~~~-- 85 (247)
T 1tqh_A 16 ERAVLLLHGFTGNSA--DVRM-LGRFLESKGYTCHAPIYKGHGVPPEE---L--VHTGPDDWWQDVMNGYEFLKNKGY-- 85 (247)
T ss_dssp SCEEEEECCTTCCTH--HHHH-HHHHHHHTTCEEEECCCTTSSSCHHH---H--TTCCHHHHHHHHHHHHHHHHHHTC--
T ss_pred CcEEEEECCCCCChH--HHHH-HHHHHHHCCCEEEecccCCCCCCHHH---h--cCCCHHHHHHHHHHHHHHHHHcCC--
Confidence 477999999765532 2333 34556558999999999998843111 0 0111112 2456666777766654
Q ss_pred CCcEEEEeeChHHHHHHHHHHhCCCceeEEEec-CCcccc-ccccc--c-cCCccchhhcCCCCc--HHH----------
Q 003878 617 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAH-VGVMDM-LRYHK--F-TIGHAWVSDFGCSEE--EEE---------- 679 (789)
Q Consensus 617 ~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~-~p~~d~-~~~~~--~-~~~~~~~~e~g~p~~--~~~---------- 679 (789)
+++.++|+|+||.+++.++.++| ++++|+. .|.... ..... . .....+....+.... ...
T Consensus 86 -~~~~lvG~SmGG~ia~~~a~~~p--v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (247)
T 1tqh_A 86 -EKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYAREYKKREGKSEEQIEQEMEKFKQTPMK 162 (247)
T ss_dssp -CCEEEEEETHHHHHHHHHHTTSC--CSCEEEESCCSSCCCHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHTTSCCT
T ss_pred -CeEEEEEeCHHHHHHHHHHHhCC--CCeEEEEcceeecCcchhhhHHHHHHHHHhhcccccchHHHHhhhhcccCCCHH
Confidence 58999999999999999999999 6666643 343210 00000 0 000000000010000 000
Q ss_pred -HHHHHhc--CcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCC
Q 003878 680 -FYWLIKY--SPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERK 756 (789)
Q Consensus 680 -~~~l~~~--sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~ 756 (789)
...+..+ +....+.++ ..|+|+++|++|..+|+..+.++++.+. +...++.++++
T Consensus 163 ~~~~~~~~~~~~~~~l~~i----------~~P~Lii~G~~D~~~p~~~~~~~~~~~~------------~~~~~~~~~~~ 220 (247)
T 1tqh_A 163 TLKALQELIADVRDHLDLI----------YAPTFVVQARHDEMINPDSANIIYNEIE------------SPVKQIKWYEQ 220 (247)
T ss_dssp THHHHHHHHHHHHHTGGGC----------CSCEEEEEETTCSSSCTTHHHHHHHHCC------------CSSEEEEEETT
T ss_pred HHHHHHHHHHHHHhhcccC----------CCCEEEEecCCCCCCCcchHHHHHHhcC------------CCceEEEEeCC
Confidence 0001110 111233343 6799999999999999999888876654 23478999999
Q ss_pred CCcCCCCchhhHHHHHHHHHHHHHHH
Q 003878 757 AGHGVGLPTQKMIDEAADRYGFMAKM 782 (789)
Q Consensus 757 ~gH~~~~~~~~~~~~~~~~~~fl~~~ 782 (789)
+||....... ..+..+.+.+||.+.
T Consensus 221 ~gH~~~~e~~-~~~~~~~i~~Fl~~~ 245 (247)
T 1tqh_A 221 SGHVITLDQE-KDQLHEDIYAFLESL 245 (247)
T ss_dssp CCSSGGGSTT-HHHHHHHHHHHHHHS
T ss_pred CceeeccCcc-HHHHHHHHHHHHHhc
Confidence 9998654322 135667888998753
No 161
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=99.47 E-value=1.1e-12 Score=139.35 Aligned_cols=124 Identities=16% Similarity=0.142 Sum_probs=84.9
Q ss_pred EEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhc
Q 003878 510 QVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKG 589 (789)
Q Consensus 510 ~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~ 589 (789)
..+++..|| .+|.+...-+. ..|.||++||+++...... +..++...||.|+++|.||.|.....
T Consensus 16 ~~~~~~~~g-~~l~~~~~g~~------~g~~vvllHG~~~~~~~~~----~~~~~~~~~~~vi~~D~~G~G~S~~~---- 80 (317)
T 1wm1_A 16 SGWLDTGDG-HRIYWELSGNP------NGKPAVFIHGGPGGGISPH----HRQLFDPERYKVLLFDQRGCGRSRPH---- 80 (317)
T ss_dssp EEEEECSSS-CEEEEEEEECT------TSEEEEEECCTTTCCCCGG----GGGGSCTTTEEEEEECCTTSTTCBST----
T ss_pred eeEEEcCCC-cEEEEEEcCCC------CCCcEEEECCCCCcccchh----hhhhccccCCeEEEECCCCCCCCCCC----
Confidence 345666689 88865543221 2356899999876543221 12334347999999999998754211
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 590 GALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 590 ~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
......+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 81 --~~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 139 (317)
T 1wm1_A 81 --ASLDNNTTWHLVADIERLREM--AGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIF 139 (317)
T ss_dssp --TCCTTCSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred --cccccccHHHHHHHHHHHHHH--cCCCcEEEEEeCHHHHHHHHHHHHCChheeeeeEeccC
Confidence 111234566777767766665 23468999999999999999999999999999987654
No 162
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=99.47 E-value=7.4e-13 Score=130.07 Aligned_cols=174 Identities=11% Similarity=-0.063 Sum_probs=118.7
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 615 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~ 615 (789)
++.|.||++||..+.... .|...+...+. .++ .++.+|.+ ...++++.+.+..+++. .
T Consensus 15 g~~~~vv~~HG~~~~~~~-~~~~~~~~~~~-~~~---~v~~~~~~---------------~~~~~~~~~~~~~~~~~--~ 72 (191)
T 3bdv_A 15 SQQLTMVLVPGLRDSDDE-HWQSHWERRFP-HWQ---RIRQREWY---------------QADLDRWVLAIRRELSV--C 72 (191)
T ss_dssp HTTCEEEEECCTTCCCTT-SHHHHHHHHCT-TSE---ECCCSCCS---------------SCCHHHHHHHHHHHHHT--C
T ss_pred CCCceEEEECCCCCCchh-hHHHHHHHhcC-CeE---EEeccCCC---------------CcCHHHHHHHHHHHHHh--c
Confidence 456899999998755422 33333333333 343 34555522 33467777777777765 2
Q ss_pred CCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCC
Q 003878 616 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRP 695 (789)
Q Consensus 616 d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~ 695 (789)
+ +++.++|+|+||.+++.++.++|++++++|+..|........ +. .....+.
T Consensus 73 ~-~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~~~~~~--------------~~-------------~~~~~~~ 124 (191)
T 3bdv_A 73 T-QPVILIGHSFGALAACHVVQQGQEGIAGVMLVAPAEPMRFEI--------------DD-------------RIQASPL 124 (191)
T ss_dssp S-SCEEEEEETHHHHHHHHHHHTTCSSEEEEEEESCCCGGGGTC--------------TT-------------TSCSSCC
T ss_pred C-CCeEEEEEChHHHHHHHHHHhcCCCccEEEEECCCccccccC--------------cc-------------ccccccC
Confidence 3 799999999999999999999999999999999876542111 00 0223333
Q ss_pred CCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchh-hHHHHHHH
Q 003878 696 WEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQ-KMIDEAAD 774 (789)
Q Consensus 696 ~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~-~~~~~~~~ 774 (789)
..|+|+++|++|..||+.++.++.+.+ .. ++.+++++||....... +.-+..+.
T Consensus 125 ----------~~P~lii~g~~D~~~~~~~~~~~~~~~-~~--------------~~~~~~~~gH~~~~~~~~~~~~~~~~ 179 (191)
T 3bdv_A 125 ----------SVPTLTFASHNDPLMSFTRAQYWAQAW-DS--------------ELVDVGEAGHINAEAGFGPWEYGLKR 179 (191)
T ss_dssp ----------SSCEEEEECSSBTTBCHHHHHHHHHHH-TC--------------EEEECCSCTTSSGGGTCSSCHHHHHH
T ss_pred ----------CCCEEEEecCCCCcCCHHHHHHHHHhc-CC--------------cEEEeCCCCcccccccchhHHHHHHH
Confidence 579999999999999999988888776 22 68899999998754210 11244477
Q ss_pred HHHHHHHHhC
Q 003878 775 RYGFMAKMLG 784 (789)
Q Consensus 775 ~~~fl~~~l~ 784 (789)
+.+||.+..|
T Consensus 180 i~~fl~~~~~ 189 (191)
T 3bdv_A 180 LAEFSEILIP 189 (191)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHHHHhcc
Confidence 7888876543
No 163
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.47 E-value=1.1e-12 Score=152.34 Aligned_cols=243 Identities=10% Similarity=-0.042 Sum_probs=153.7
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccccee
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFF 213 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 213 (789)
+..+++||||++|||+.+..| ++.||++++|+... ++.. +..
T Consensus 24 ~~~~~~~~DG~~la~~s~~~g----~~~lw~~~~g~~~~--lt~~---------------------~~~----------- 65 (582)
T 3o4h_A 24 KYSLQGVVDGDKLLVVGFSEG----SVNAYLYDGGETVK--LNRE---------------------PIN----------- 65 (582)
T ss_dssp EEEEEEEETTTEEEEEEEETT----EEEEEEEETTEEEE--CCSS---------------------CCS-----------
T ss_pred hheeecCCCCCeEEEEEccCC----ceeEEEEcCCCcEe--eecc---------------------ccc-----------
Confidence 678889999999999887666 45566677775543 2221 000
Q ss_pred eEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEE
Q 003878 214 FFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCW 293 (789)
Q Consensus 214 ~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~ 293 (789)
...+++|||| +++|+..... .....+||.+++....... .+.
T Consensus 66 ----------------------~~~~~~~spd--~~l~~~~~~~-------------g~~~~~l~~~~~~~~g~~~-~l~ 107 (582)
T 3o4h_A 66 ----------------------SVLDPHYGVG--RVILVRDVSK-------------GAEQHALFKVNTSRPGEEQ-RLE 107 (582)
T ss_dssp ----------------------EECEECTTCS--EEEEEEECST-------------TSCCEEEEEEETTSTTCCE-ECT
T ss_pred ----------------------ccccccCCCC--eEEEEeccCC-------------CCcceEEEEEeccCCCccc-ccc
Confidence 1478999999 5777654310 1233468888872122221 221
Q ss_pred ecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEE
Q 003878 294 KDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVF 373 (789)
Q Consensus 294 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l 373 (789)
.. . .. ...+|||||+.+++.+.... . +.++|++++. ...+..... ....|||||+.|
T Consensus 108 ~~-~-~~--~~~~~s~dg~~~~~~s~~~~--~--~~l~d~~~g~--------------~~~l~~~~~-~~~~~spDG~~l 164 (582)
T 3o4h_A 108 AV-K-PM--RILSGVDTGEAVVFTGATED--R--VALYALDGGG--------------LRELARLPG-FGFVSDIRGDLI 164 (582)
T ss_dssp TS-C-SB--EEEEEEECSSCEEEEEECSS--C--EEEEEEETTE--------------EEEEEEESS-CEEEEEEETTEE
T ss_pred CC-C-Cc--eeeeeCCCCCeEEEEecCCC--C--ceEEEccCCc--------------EEEeecCCC-ceEEECCCCCEE
Confidence 11 1 11 24689999999888765433 2 3366877642 223333222 335599999999
Q ss_pred EEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeE
Q 003878 374 TFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSV 453 (789)
Q Consensus 374 ~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v 453 (789)
++.++.......|+++|+++++ .+.+..+. ..+..++|++|++.++....++..+|++||+++|+.. .++.....+
T Consensus 165 a~~~~~~~~~~~i~~~d~~~g~-~~~l~~~~--~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~ 240 (582)
T 3o4h_A 165 AGLGFFGGGRVSLFTSNLSSGG-LRVFDSGE--GSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDF 240 (582)
T ss_dssp EEEEEEETTEEEEEEEETTTCC-CEEECCSS--CEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHH
T ss_pred EEEEEcCCCCeEEEEEcCCCCC-ceEeecCC--CccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcCh
Confidence 9887764444779999998887 66665544 4568899999777666777777779999999987763 444333333
Q ss_pred EEee--------cccCCcEEEEEEcCCCCCcEEEEEEC
Q 003878 454 NAIS--------ARREDSVVFISFTSFLIPGIVYQCNL 483 (789)
Q Consensus 454 ~~~s--------~s~d~~~l~~~~ss~~~P~~ly~~dl 483 (789)
..+. ++||+ .++++.+. -+++.+|++
T Consensus 241 ~~~~~~~~~~~~~spdg-~~~~~~~~---~g~~~l~~~ 274 (582)
T 3o4h_A 241 SSYRPTAITWLGYLPDG-RLAVVARR---EGRSAVFID 274 (582)
T ss_dssp HHHCCSEEEEEEECTTS-CEEEEEEE---TTEEEEEET
T ss_pred hhhhhccccceeEcCCC-cEEEEEEc---CCcEEEEEE
Confidence 3344 89999 56665543 246777777
No 164
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META cleavage product hydrolase, histidine tagged protein, alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP: c.69.1.10
Probab=99.47 E-value=2.7e-13 Score=143.29 Aligned_cols=226 Identities=14% Similarity=0.089 Sum_probs=132.2
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCC-CccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGF-NISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 594 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~ 594 (789)
.+| .+|.+... + +.|.||++||.. +......|... ...|. ++|.|+++|+||.|.... ..
T Consensus 23 ~~g-~~l~y~~~---g-----~g~~vvllHG~~~~~~~~~~~~~~-~~~L~-~~~~vi~~Dl~G~G~S~~--------~~ 83 (296)
T 1j1i_A 23 AGG-VETRYLEA---G-----KGQPVILIHGGGAGAESEGNWRNV-IPILA-RHYRVIAMDMLGFGKTAK--------PD 83 (296)
T ss_dssp ETT-EEEEEEEE---C-----CSSEEEEECCCSTTCCHHHHHTTT-HHHHT-TTSEEEEECCTTSTTSCC--------CS
T ss_pred ECC-EEEEEEec---C-----CCCeEEEECCCCCCcchHHHHHHH-HHHHh-hcCEEEEECCCCCCCCCC--------CC
Confidence 478 78765432 2 236799999964 22222223322 34565 569999999999876431 11
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccc-------cccCC-c-
Q 003878 595 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH-------KFTIG-H- 665 (789)
Q Consensus 595 ~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~-------~~~~~-~- 665 (789)
...+++++.+.+..+++.-.. .+++.++|+|+||.+++.++.++|++++++|+..|........ ..... .
T Consensus 84 ~~~~~~~~~~dl~~~l~~l~~-~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (296)
T 1j1i_A 84 IEYTQDRRIRHLHDFIKAMNF-DGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSAGLVVEIHEDLRPIINYDFTREG 162 (296)
T ss_dssp SCCCHHHHHHHHHHHHHHSCC-SSCEEEEEEHHHHHHHHHHHHHCGGGEEEEEEESCCBCCCC----------CCSCHHH
T ss_pred CCCCHHHHHHHHHHHHHhcCC-CCCeEEEEEChhHHHHHHHHHhChHhhhEEEEECCCCCCCCCCchHHHHhcccCCchH
Confidence 123566666665555554212 2689999999999999999999999999999887754211100 00000 0
Q ss_pred --cchhh-cCCC--CcHH----------------HHHHHH-hc-------CcccCCCCCCCCCCCCCCCCCeEEEEecCC
Q 003878 666 --AWVSD-FGCS--EEEE----------------EFYWLI-KY-------SPLHNVRRPWEQNPDKPFQYPSTLLLTADH 716 (789)
Q Consensus 666 --~~~~e-~g~p--~~~~----------------~~~~l~-~~-------sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~ 716 (789)
..... ..++ ..++ .+..+. .. .....+.++ ..|+|+++|++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~P~Lii~G~~ 232 (296)
T 1j1i_A 163 MVHLVKALTNDGFKIDDAMINSRYTYATDEATRKAYVATMQWIREQGGLFYDPEFIRKV----------QVPTLVVQGKD 232 (296)
T ss_dssp HHHHHHHHSCTTCCCCHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHTSSBCCHHHHTTC----------CSCEEEEEETT
T ss_pred HHHHHHHhccCcccccHHHHHHHHHHhhCcchhhHHHHHHHHHHhcccccccHHHhhcC----------CCCEEEEEECC
Confidence 00000 1111 0010 011000 00 011122333 68999999999
Q ss_pred CCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCCCC
Q 003878 717 DDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGASW 787 (789)
Q Consensus 717 D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~~~ 787 (789)
|..+|+..+.++.+.+.. .++.+++++||....... .+..+.+.+||.+.++..+
T Consensus 233 D~~~~~~~~~~~~~~~~~--------------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~~~~~~~ 287 (296)
T 1j1i_A 233 DKVVPVETAYKFLDLIDD--------------SWGYIIPHCGHWAMIEHP--EDFANATLSFLSLRVDITP 287 (296)
T ss_dssp CSSSCHHHHHHHHHHCTT--------------EEEEEESSCCSCHHHHSH--HHHHHHHHHHHHHC-----
T ss_pred CcccCHHHHHHHHHHCCC--------------CEEEEECCCCCCchhcCH--HHHHHHHHHHHhccCCcCc
Confidence 999999988877665432 478899999998643222 3566788999998877653
No 165
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=99.47 E-value=2.1e-13 Score=139.59 Aligned_cols=206 Identities=14% Similarity=0.034 Sum_probs=123.4
Q ss_pred CccEEEEEcCCCCccCCCC-CCHHHHHHHHcCCeEEEEEeecCCC--------------------CCChhHHhcccccCC
Q 003878 537 SHPCLLYGYGGFNISVTPS-FSVSRTILMRHLGAVFCIANIRGGG--------------------EYGEEWHKGGALAKK 595 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~~~-~~~~~~~~l~~~G~~v~~~~~RG~g--------------------~~g~~~~~~~~~~~~ 595 (789)
+.|.||++||..++..... ....+...|.++||.|+.+|.++.. +....|.... .
T Consensus 4 ~~~~vl~lHG~g~~~~~~~~~~~~l~~~l~~~g~~v~~~d~p~~~~~~~~~~~~~~~~~~~~~g~g~~~~w~~~~----~ 79 (243)
T 1ycd_A 4 QIPKLLFLHGFLQNGKVFSEKSSGIRKLLKKANVQCDYIDAPVLLEKKDLPFEMDDEKWQATLDADVNRAWFYHS----E 79 (243)
T ss_dssp CCCEEEEECCTTCCHHHHHHHTHHHHHHHHHTTCEEEEECCSEECCGGGCSSCCCHHHHHHHHHTTCCEESSCCC----S
T ss_pred cCceEEEeCCCCccHHHHHHHHHHHHHHHhhcceEEEEcCCCeeCCCcCcccccccccccccCCCCCCcccccCC----C
Confidence 5689999999765432211 0112345555469999999998321 1112333211 1
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCC------CceeEEEecCCcccccccccccCCccchh
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRP------DLFGCALAHVGVMDMLRYHKFTIGHAWVS 669 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p------d~f~a~v~~~p~~d~~~~~~~~~~~~~~~ 669 (789)
.....|+.+++++|.+.-..+..+++|+|+|+||.+++.++.+++ ..+++++..+++..............+..
T Consensus 80 ~~~~~d~~~~~~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~~~~~ 159 (243)
T 1ycd_A 80 ISHELDISEGLKSVVDHIKANGPYDGIVGLSQGAALSSIITNKISELVPDHPQFKVSVVISGYSFTEPDPEHPGELRITE 159 (243)
T ss_dssp SGGGCCCHHHHHHHHHHHHHHCCCSEEEEETHHHHHHHHHHHHHHHHSTTCCCCSEEEEESCCCCEEECTTSTTCEEECG
T ss_pred CcchhhHHHHHHHHHHHHHhcCCeeEEEEeChHHHHHHHHHHHHhhcccCCCCceEEEEecCCCCCCcccccccccccch
Confidence 123456666666665542234468999999999999999988643 14667777666543211100000000000
Q ss_pred hcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCC---
Q 003878 670 DFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT--- 746 (789)
Q Consensus 670 e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--- 746 (789)
.+ . ..+..+..+ .+|+|++||.+|..||+.++.++++.+... +
T Consensus 160 ~~------------~--~~~~~~~~~----------~~P~l~i~G~~D~~vp~~~~~~~~~~~~~~----------~g~~ 205 (243)
T 1ycd_A 160 KF------------R--DSFAVKPDM----------KTKMIFIYGASDQAVPSVRSKYLYDIYLKA----------QNGN 205 (243)
T ss_dssp GG------------T--TTTCCCTTC----------CCEEEEEEETTCSSSCHHHHHHHHHHHHHH----------TTTC
T ss_pred hH------------H--HhccCcccC----------CCCEEEEEeCCCCccCHHHHHHHHHHhhhh----------cccc
Confidence 00 0 112223333 689999999999999999999999988763 1
Q ss_pred -CcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 747 -NPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 747 -~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
.... .+++++||.+... + .....+.+||.++++.
T Consensus 206 ~~~~~-~~~~~~gH~~~~~--~--~~~~~i~~fl~~~~~~ 240 (243)
T 1ycd_A 206 KEKVL-AYEHPGGHMVPNK--K--DIIRPIVEQITSSLQE 240 (243)
T ss_dssp TTTEE-EEEESSSSSCCCC--H--HHHHHHHHHHHHHHC-
T ss_pred ccccE-EEecCCCCcCCch--H--HHHHHHHHHHHHhhhh
Confidence 1233 4556789987543 1 4677899999988764
No 166
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=99.47 E-value=1.4e-13 Score=144.19 Aligned_cols=116 Identities=13% Similarity=0.053 Sum_probs=85.5
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCc
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 596 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~ 596 (789)
+| .++.+...-+ ...|+||++||..+.... |.. ....|+ +||.|+++|.||.|.... ....
T Consensus 18 ~g-~~l~~~~~g~------~~~~~vl~lHG~~~~~~~--~~~-~~~~l~-~~~~v~~~d~~G~G~s~~--------~~~~ 78 (299)
T 3g9x_A 18 LG-ERMHYVDVGP------RDGTPVLFLHGNPTSSYL--WRN-IIPHVA-PSHRCIAPDLIGMGKSDK--------PDLD 78 (299)
T ss_dssp TT-EEEEEEEESC------SSSCCEEEECCTTCCGGG--GTT-THHHHT-TTSCEEEECCTTSTTSCC--------CCCC
T ss_pred CC-eEEEEEecCC------CCCCEEEEECCCCccHHH--HHH-HHHHHc-cCCEEEeeCCCCCCCCCC--------CCCc
Confidence 78 8887665532 235789999998765443 333 234566 799999999999875432 1124
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 597 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 597 ~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
.+++++.+.+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+..+..
T Consensus 79 ~~~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 133 (299)
T 3g9x_A 79 YFFDDHVRYLDAFIEA--LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIR 133 (299)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEEHHHHHHHHHHHHHSGGGEEEEEEEEECC
T ss_pred ccHHHHHHHHHHHHHH--hCCCcEEEEEeCccHHHHHHHHHhcchheeEEEEecCCc
Confidence 5677777777777765 345689999999999999999999999999999887443
No 167
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=99.46 E-value=3.3e-12 Score=134.77 Aligned_cols=122 Identities=12% Similarity=0.077 Sum_probs=85.4
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.|| .+|.+...-+ ...|.||++||..+... .|.......|.++||.|+++|.||.|..... .....
T Consensus 8 ~~g-~~l~y~~~G~------~~~~~vvllHG~~~~~~--~w~~~~~~~L~~~G~~vi~~D~rG~G~S~~~-----~~~~~ 73 (298)
T 1q0r_A 8 SGD-VELWSDDFGD------PADPALLLVMGGNLSAL--GWPDEFARRLADGGLHVIRYDHRDTGRSTTR-----DFAAH 73 (298)
T ss_dssp ETT-EEEEEEEESC------TTSCEEEEECCTTCCGG--GSCHHHHHHHHTTTCEEEEECCTTSTTSCCC-----CTTTS
T ss_pred cCC-eEEEEEeccC------CCCCeEEEEcCCCCCcc--chHHHHHHHHHhCCCEEEeeCCCCCCCCCCC-----CCCcC
Confidence 478 8887655422 13478999999766543 4554443556668999999999998864320 00112
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
..+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..+..
T Consensus 74 ~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 129 (298)
T 1q0r_A 74 PYGFGELAADAVAVLDG--WGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGG 129 (298)
T ss_dssp CCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CcCHHHHHHHHHHHHHH--hCCCceEEEEeCcHHHHHHHHHHhCchhhheeEEecccC
Confidence 34566666666665554 234689999999999999999999999999999876543
No 168
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida} PDB: 4dgq_A
Probab=99.46 E-value=1.5e-12 Score=135.63 Aligned_cols=120 Identities=17% Similarity=0.160 Sum_probs=82.1
Q ss_pred EecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccc
Q 003878 513 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGAL 592 (789)
Q Consensus 513 ~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~ 592 (789)
+++.|| .+|.+...-|+ ..|.||++||..+... .|... ...|.++||.|+++|.||.|.....
T Consensus 4 ~~~~~g-~~l~y~~~g~~------~~~~vvllHG~~~~~~--~w~~~-~~~L~~~g~~vi~~D~~G~G~S~~~------- 66 (276)
T 1zoi_A 4 VTTKDG-VQIFYKDWGPR------DAPVIHFHHGWPLSAD--DWDAQ-LLFFLAHGYRVVAHDRRGHGRSSQV------- 66 (276)
T ss_dssp EECTTS-CEEEEEEESCT------TSCEEEEECCTTCCGG--GGHHH-HHHHHHTTCEEEEECCTTSTTSCCC-------
T ss_pred EECCCC-cEEEEEecCCC------CCCeEEEECCCCcchh--HHHHH-HHHHHhCCCEEEEecCCCCCCCCCC-------
Confidence 556789 88876554322 2478999999765543 34443 3445558999999999998865321
Q ss_pred cCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCceeEEEecCCc
Q 003878 593 AKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGV 652 (789)
Q Consensus 593 ~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-pd~f~a~v~~~p~ 652 (789)
....+++++.+-+..+++. .+.+++.++|||+||.+++.++.++ |++++++|+..+.
T Consensus 67 -~~~~~~~~~~~d~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~ 124 (276)
T 1zoi_A 67 -WDGHDMDHYADDVAAVVAH--LGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAV 124 (276)
T ss_dssp -SSCCSHHHHHHHHHHHHHH--HTCTTCEEEEETHHHHHHHHHHHHCTTSCCCCEEEESCC
T ss_pred -CCCCCHHHHHHHHHHHHHH--hCCCceEEEEECccHHHHHHHHHHhCHHheeeeEEecCC
Confidence 1123455555444444443 2335899999999999999877776 9999999987754
No 169
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural genomics, joint center for structural genomics, JCSG; HET: MSE PGE; 1.96A {Bacillus subtilis}
Probab=99.46 E-value=1.1e-12 Score=139.09 Aligned_cols=236 Identities=13% Similarity=0.084 Sum_probs=135.6
Q ss_pred EEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHh
Q 003878 509 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK 588 (789)
Q Consensus 509 ~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~ 588 (789)
+...++. +| .++.+...-+ +..|+||++||+.+.... |... ...|. +||.|+++|+||.|+...
T Consensus 46 ~~~~v~~-~~-~~~~~~~~g~------~~~~~vv~lHG~~~~~~~--~~~~-~~~L~-~g~~vi~~D~~G~gG~s~---- 109 (306)
T 2r11_A 46 KSFYIST-RF-GQTHVIASGP------EDAPPLVLLHGALFSSTM--WYPN-IADWS-SKYRTYAVDIIGDKNKSI---- 109 (306)
T ss_dssp EEEEECC-TT-EEEEEEEESC------TTSCEEEEECCTTTCGGG--GTTT-HHHHH-HHSEEEEECCTTSSSSCE----
T ss_pred ceEEEec-CC-ceEEEEeeCC------CCCCeEEEECCCCCCHHH--HHHH-HHHHh-cCCEEEEecCCCCCCCCC----
Confidence 4444554 45 5676654321 245899999998766544 3332 34566 499999999999733211
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccccc------c
Q 003878 589 GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHKF------T 662 (789)
Q Consensus 589 ~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~~------~ 662 (789)
......+++|+.+.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+..|.......... .
T Consensus 110 ---~~~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~ 184 (306)
T 2r11_A 110 ---PENVSGTRTDYANWLLDVFDN--LGIEKSHMIGLSLGGLHTMNFLLRMPERVKSAAILSPAETFLPFHHDFYKYALG 184 (306)
T ss_dssp ---ECSCCCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSSBTSCCCHHHHHHHHT
T ss_pred ---CCCCCCCHHHHHHHHHHHHHh--cCCCceeEEEECHHHHHHHHHHHhCccceeeEEEEcCccccCcccHHHHHHHhH
Confidence 111234566777766666654 23468999999999999999999999999999999987765221100 0
Q ss_pred C-Ccc----chhhc-CCC--CcHH---HHHHHHhc-CcccCCC---CCCC---CCCCCCCCCCeEEEEecCCCCCCCcHH
Q 003878 663 I-GHA----WVSDF-GCS--EEEE---EFYWLIKY-SPLHNVR---RPWE---QNPDKPFQYPSTLLLTADHDDRVVPLH 724 (789)
Q Consensus 663 ~-~~~----~~~e~-g~p--~~~~---~~~~l~~~-sP~~~v~---~~~~---~~~~~~~~~pp~Li~~g~~D~~V~~~~ 724 (789)
. ... +...+ +.. ..+. .......+ ..+.... .... ....-.....|+|+++|++|..+|+.+
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~D~~~~~~~ 264 (306)
T 2r11_A 185 LTASNGVETFLNWMMNDQNVLHPIFVKQFKAGVMWQDGSRNPNPNADGFPYVFTDEELRSARVPILLLLGEHEVIYDPHS 264 (306)
T ss_dssp TTSTTHHHHHHHHHTTTCCCSCHHHHHHHHHHHHCCSSSCCCCCCTTSSSCBCCHHHHHTCCSCEEEEEETTCCSSCHHH
T ss_pred HHHHHHHHHHHHHhhCCccccccccccccHHHHHHHHhhhhhhhhccCCCCCCCHHHHhcCCCCEEEEEeCCCcccCHHH
Confidence 0 000 00000 110 1000 00000000 0000000 0000 000000125699999999999999988
Q ss_pred HHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 725 SLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 725 ~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
+.++.+++. ..+++.+++++||....... .+..+.+.+||.
T Consensus 265 ~~~~~~~~~-------------~~~~~~~~~~~gH~~~~e~p--~~~~~~i~~fl~ 305 (306)
T 2r11_A 265 ALHRASSFV-------------PDIEAEVIKNAGHVLSMEQP--TYVNERVMRFFN 305 (306)
T ss_dssp HHHHHHHHS-------------TTCEEEEETTCCTTHHHHSH--HHHHHHHHHHHC
T ss_pred HHHHHHHHC-------------CCCEEEEeCCCCCCCcccCH--HHHHHHHHHHHh
Confidence 776665432 12478999999997643222 345566777764
No 170
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=99.46 E-value=4.1e-13 Score=140.92 Aligned_cols=220 Identities=13% Similarity=0.030 Sum_probs=131.1
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccC-CCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 594 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~ 594 (789)
.+| .+|.+... ++.|.||++||...... ...|... ...|. +||.|+++|.||.|..... ..
T Consensus 12 ~~g-~~l~y~~~--------G~g~~vvllHG~~~~~~~~~~w~~~-~~~L~-~~~~vi~~Dl~G~G~S~~~-------~~ 73 (282)
T 1iup_A 12 AAG-VLTNYHDV--------GEGQPVILIHGSGPGVSAYANWRLT-IPALS-KFYRVIAPDMVGFGFTDRP-------EN 73 (282)
T ss_dssp ETT-EEEEEEEE--------CCSSEEEEECCCCTTCCHHHHHTTT-HHHHT-TTSEEEEECCTTSTTSCCC-------TT
T ss_pred ECC-EEEEEEec--------CCCCeEEEECCCCCCccHHHHHHHH-HHhhc-cCCEEEEECCCCCCCCCCC-------CC
Confidence 368 77765432 23467999999533222 1133332 24455 8999999999998754311 11
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccc-------ccccCC-c-
Q 003878 595 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY-------HKFTIG-H- 665 (789)
Q Consensus 595 ~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~-------~~~~~~-~- 665 (789)
...+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..|....... ...... .
T Consensus 74 ~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~GG~ia~~~A~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (282)
T 1iup_A 74 YNYSKDSWVDHIIGIMDA--LEIEKAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIEN 151 (282)
T ss_dssp CCCCHHHHHHHHHHHHHH--TTCCSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESCCCSCCCCCHHHHHHHTCCSCHHH
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCceEEEEECHhHHHHHHHHHHChHHHHHHHeeCCccCCCCCCHHHHHHhcCCCcHHH
Confidence 123566666666666654 23468999999999999999999999999999988765421100 000000 0
Q ss_pred --cchhh-------------------cCCCCcHHHHHHHHh---------cC-cccCCCCCCCCCCCCCCCCCeEEEEec
Q 003878 666 --AWVSD-------------------FGCSEEEEEFYWLIK---------YS-PLHNVRRPWEQNPDKPFQYPSTLLLTA 714 (789)
Q Consensus 666 --~~~~e-------------------~g~p~~~~~~~~l~~---------~s-P~~~v~~~~~~~~~~~~~~pp~Li~~g 714 (789)
.+... ...|.....+..+.. +. +...+.++ ..|+|+++|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~P~lii~G 221 (282)
T 1iup_A 152 MRNLLDIFAYDRSLVTDELARLRYEASIQPGFQESFSSMFPEPRQRWIDALASSDEDIKTL----------PNETLIIHG 221 (282)
T ss_dssp HHHHHHHHCSSGGGCCHHHHHHHHHHHTSTTHHHHHHHHSCSSTHHHHHHHCCCHHHHTTC----------CSCEEEEEE
T ss_pred HHHHHHHhhcCcccCCHHHHHHHHhhccChHHHHHHHHHHhccccccccccccchhhhhhc----------CCCEEEEec
Confidence 00000 011110001100000 00 00122333 679999999
Q ss_pred CCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 715 DHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 715 ~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
++|..+|+..+.++.+.+.. .++.+++++||....... .+..+.+.+||.+
T Consensus 222 ~~D~~~p~~~~~~~~~~~~~--------------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 272 (282)
T 1iup_A 222 REDQVVPLSSSLRLGELIDR--------------AQLHVFGRCGHWTQIEQT--DRFNRLVVEFFNE 272 (282)
T ss_dssp TTCSSSCHHHHHHHHHHCTT--------------EEEEEESSCCSCHHHHSH--HHHHHHHHHHHHT
T ss_pred CCCCCCCHHHHHHHHHhCCC--------------CeEEEECCCCCCccccCH--HHHHHHHHHHHhc
Confidence 99999999888777665432 478999999998643222 3556678888875
No 171
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.46 E-value=3e-12 Score=139.33 Aligned_cols=260 Identities=12% Similarity=0.026 Sum_probs=156.2
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCce-EEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSD-WATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYL 208 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~-~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 208 (789)
+...|..++|||||++||-+.+....- ...|++|+..++.......... ..|..
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~---~~~~~---------------------- 95 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAG---VQTEA---------------------- 95 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEE---EECSS----------------------
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEeccc---CCCCC----------------------
Confidence 445689999999999999655322211 3579999998885433111110 00000
Q ss_pred ccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCC
Q 003878 209 RGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE 288 (789)
Q Consensus 209 ~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~ 288 (789)
....++|+||++.|. ...+ ..|++|++.++...
T Consensus 96 ---------------------------~V~~~~~s~d~~~l~-~s~d-------------------g~v~lWd~~~~~~~ 128 (357)
T 4g56_B 96 ---------------------------GVTDVAWVSEKGILV-ASDS-------------------GAVELWEILEKESL 128 (357)
T ss_dssp ---------------------------CEEEEEEETTTEEEE-EETT-------------------SCEEEC--------
T ss_pred ---------------------------CEEEEEEcCCCCEEE-EECC-------------------CEEEEeecccccee
Confidence 146899999986553 3221 24788887665432
Q ss_pred cEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEe
Q 003878 289 DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIA 367 (789)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s 367 (789)
....+....+...+..++|+|||++|+....+ ..|.++|+.++. ....+........ ..|+
T Consensus 129 ~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~d-----g~v~iwd~~~~~-------------~~~~~~~h~~~v~~v~~s 190 (357)
T 4g56_B 129 LVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKD-----FSVKVWDLSQKA-------------VLKSYNAHSSEVNCVAAC 190 (357)
T ss_dssp CCCCEEECCCSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTTE-------------EEEEECCCSSCEEEEEEC
T ss_pred EEEeeccCCCCCCEEEEEECCCCCEEEEEeCC-----CeEEEEECCCCc-------------EEEEEcCCCCCEEEEEEc
Confidence 22222222334457789999999999866533 348888988742 1222222222222 3378
Q ss_pred cCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecC-CEEEEEEEeCCeEEEEEEECCCCceeeec
Q 003878 368 NDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQL 446 (789)
Q Consensus 368 ~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~-~~lv~~~~~~g~~~L~~~dl~tG~~~~~l 446 (789)
++++.+++.... +..|..+|+.+++....+........+..++++++ +.+++....++ .|++||+.+++..+.+
T Consensus 191 ~~~~~~~~s~~~---dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~--~i~~wd~~~~~~~~~~ 265 (357)
T 4g56_B 191 PGKDTIFLSCGE---DGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETG--NVSLVNIKNPDSAQTS 265 (357)
T ss_dssp TTCSSCEEEEET---TSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSS--CEEEEESSCGGGCEEE
T ss_pred cCCCceeeeecc---CCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeeccc--ceeEEECCCCcEeEEE
Confidence 888755544433 35788899987752222222222355778888874 56777777776 6889999888776667
Q ss_pred ccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 447 PIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 447 ~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
......+..++++|++..++++.+. -.+++.||+.+++
T Consensus 266 ~~~~~~v~~l~~sp~~~~~lasgs~---D~~i~iwd~~~~~ 303 (357)
T 4g56_B 266 AVHSQNITGLAYSYHSSPFLASISE---DCTVAVLDADFSE 303 (357)
T ss_dssp CCCSSCEEEEEECSSSSCCEEEEET---TSCEEEECTTSCE
T ss_pred eccceeEEEEEEcCCCCCEEEEEeC---CCEEEEEECCCCc
Confidence 6666778889999998766655432 3579999998874
No 172
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=99.45 E-value=5.4e-13 Score=140.25 Aligned_cols=208 Identities=13% Similarity=-0.006 Sum_probs=125.1
Q ss_pred ccEEEEEcCCC-CccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCC
Q 003878 538 HPCLLYGYGGF-NISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 616 (789)
Q Consensus 538 ~P~ll~~hGg~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d 616 (789)
.|.||++||.. +......|.......|. ..|.|+++|.||.|..... .....+++++.+.+..+++. ..
T Consensus 33 g~~vvllHG~~~~~~~~~~w~~~~~~~L~-~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~--l~ 102 (286)
T 2puj_A 33 GETVIMLHGGGPGAGGWSNYYRNVGPFVD-AGYRVILKDSPGFNKSDAV-------VMDEQRGLVNARAVKGLMDA--LD 102 (286)
T ss_dssp SSEEEEECCCSTTCCHHHHHTTTHHHHHH-TTCEEEEECCTTSTTSCCC-------CCSSCHHHHHHHHHHHHHHH--TT
T ss_pred CCcEEEECCCCCCCCcHHHHHHHHHHHHh-ccCEEEEECCCCCCCCCCC-------CCcCcCHHHHHHHHHHHHHH--hC
Confidence 47899999973 22222233332214566 5699999999998764321 11134677776666666654 23
Q ss_pred CCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccc-c--c---------c--cCCc----cchhhc-CCC--C
Q 003878 617 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY-H--K---------F--TIGH----AWVSDF-GCS--E 675 (789)
Q Consensus 617 ~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~-~--~---------~--~~~~----~~~~e~-g~p--~ 675 (789)
.+++.++|||+||.+++.++.++|++++++|+..|....... . . . .... .+...+ ..+ .
T Consensus 103 ~~~~~lvGhS~GG~va~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (286)
T 2puj_A 103 IDRAHLVGNAMGGATALNFALEYPDRIGKLILMGPGGLGPSMFAPMPMEGIKLLFKLYAEPSYETLKQMLQVFLYDQSLI 182 (286)
T ss_dssp CCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHHHCSCGGGC
T ss_pred CCceEEEEECHHHHHHHHHHHhChHhhheEEEECccccCCCcccccchhhHHHHHHHhhCCcHHHHHHHHHHHhcCCccC
Confidence 468999999999999999999999999999998775421100 0 0 0 0000 000000 111 0
Q ss_pred cHH--------------HHHHHHh---------cCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHH
Q 003878 676 EEE--------------EFYWLIK---------YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATM 732 (789)
Q Consensus 676 ~~~--------------~~~~l~~---------~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L 732 (789)
.++ ....+.. +.....+.++ ..|+|+++|++|..+|+..+.++.+.+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~P~Lii~G~~D~~~p~~~~~~~~~~~ 252 (286)
T 2puj_A 183 TEELLQGRWEAIQRQPEHLKNFLISAQKAPLSTWDVTARLGEI----------KAKTFITWGRDDRFVPLDHGLKLLWNI 252 (286)
T ss_dssp CHHHHHHHHHHHHHCHHHHHHHHHHHHHSCGGGGCCGGGGGGC----------CSCEEEEEETTCSSSCTHHHHHHHHHS
T ss_pred CHHHHHHHHHHhhcCHHHHHHHHHHHhhhhccccchhhHHhhc----------CCCEEEEEECCCCccCHHHHHHHHHHC
Confidence 011 0111110 0111122333 679999999999999999888776655
Q ss_pred HHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 733 QYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
.. .++.+++++||....... .+..+.+.+||.+
T Consensus 253 ~~--------------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 285 (286)
T 2puj_A 253 DD--------------ARLHVFSKCGAWAQWEHA--DEFNRLVIDFLRH 285 (286)
T ss_dssp SS--------------EEEEEESSCCSCHHHHTH--HHHHHHHHHHHHH
T ss_pred CC--------------CeEEEeCCCCCCccccCH--HHHHHHHHHHHhc
Confidence 32 478999999998643222 3456677888864
No 173
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase); PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Probab=99.44 E-value=4.9e-13 Score=140.18 Aligned_cols=222 Identities=13% Similarity=0.045 Sum_probs=129.3
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCC-CccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhccccc
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGF-NISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA 593 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~ 593 (789)
..+| .++.+...-+ ...|+||++||.. +......|... ...|. .+|.|+++|.||.|..... .
T Consensus 13 ~~~g-~~l~y~~~g~------~g~p~vvllHG~~~~~~~~~~~~~~-~~~L~-~~~~vi~~D~~G~G~S~~~-------~ 76 (285)
T 1c4x_A 13 PSGT-LASHALVAGD------PQSPAVVLLHGAGPGAHAASNWRPI-IPDLA-ENFFVVAPDLIGFGQSEYP-------E 76 (285)
T ss_dssp CCTT-SCEEEEEESC------TTSCEEEEECCCSTTCCHHHHHGGG-HHHHH-TTSEEEEECCTTSTTSCCC-------S
T ss_pred EECC-EEEEEEecCC------CCCCEEEEEeCCCCCCcchhhHHHH-HHHHh-hCcEEEEecCCCCCCCCCC-------C
Confidence 4578 7776543311 1347799999963 22222233333 34556 5699999999998754321 1
Q ss_pred CCcchHHHH----HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccc--------ccc
Q 003878 594 KKQNCFDDF----ISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY--------HKF 661 (789)
Q Consensus 594 ~~~~~~~D~----~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~--------~~~ 661 (789)
....+++++ .+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..|....... ...
T Consensus 77 ~~~~~~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 154 (285)
T 1c4x_A 77 TYPGHIMSWVGMRVEQILGLMNH--FGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGAPMNARPPELARLLAF 154 (285)
T ss_dssp SCCSSHHHHHHHHHHHHHHHHHH--HTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCSSCCHHHHHHHTG
T ss_pred CcccchhhhhhhHHHHHHHHHHH--hCCCccEEEEEChHHHHHHHHHHhChHHhheEEEeccCCCCCCccchhHHHHHHH
Confidence 112345555 5555544443 12368999999999999999999999999999998775421100 000
Q ss_pred -c-CCc----cchhh-cCCCC----cHH-------------HHHHHHh-c----C-------cccCCCCCCCCCCCCCCC
Q 003878 662 -T-IGH----AWVSD-FGCSE----EEE-------------EFYWLIK-Y----S-------PLHNVRRPWEQNPDKPFQ 705 (789)
Q Consensus 662 -~-~~~----~~~~e-~g~p~----~~~-------------~~~~l~~-~----s-------P~~~v~~~~~~~~~~~~~ 705 (789)
. ... .+... ..++. .++ ....+.. + . +...+.++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i---------- 224 (285)
T 1c4x_A 155 YADPRLTPYRELIHSFVYDPENFPGMEEIVKSRFEVANDPEVRRIQEVMFESMKAGMESLVIPPATLGRL---------- 224 (285)
T ss_dssp GGSCCHHHHHHHHHTTSSCSTTCTTHHHHHHHHHHHHHCHHHHHHHHHHHHHHSSCCGGGCCCHHHHTTC----------
T ss_pred hccccHHHHHHHHHHhhcCcccccCcHHHHHHHHHhccCHHHHHHHHHHhccccccccccccchhhhccC----------
Confidence 0 000 00000 01110 111 1111110 0 0 00112232
Q ss_pred CCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 706 YPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 706 ~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
..|+|+++|++|..+|+..+.++.+.+. ..++.+++++||....... .+..+.+.+||.
T Consensus 225 ~~P~lii~G~~D~~~p~~~~~~~~~~~~--------------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 283 (285)
T 1c4x_A 225 PHDVLVFHGRQDRIVPLDTSLYLTKHLK--------------HAELVVLDRCGHWAQLERW--DAMGPMLMEHFR 283 (285)
T ss_dssp CSCEEEEEETTCSSSCTHHHHHHHHHCS--------------SEEEEEESSCCSCHHHHSH--HHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHhCC--------------CceEEEeCCCCcchhhcCH--HHHHHHHHHHHh
Confidence 6799999999999999998887765543 2478999999998643222 345566778875
No 174
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=99.44 E-value=2.2e-13 Score=153.02 Aligned_cols=116 Identities=11% Similarity=0.049 Sum_probs=77.3
Q ss_pred CccEEEEEcCCCCccCCCC-CCHHHH--HHHHcCCeEEEEEeecCC--CCCChhHHhc--cc-----ccCCcchHHHHHH
Q 003878 537 SHPCLLYGYGGFNISVTPS-FSVSRT--ILMRHLGAVFCIANIRGG--GEYGEEWHKG--GA-----LAKKQNCFDDFIS 604 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~~~-~~~~~~--~~l~~~G~~v~~~~~RG~--g~~g~~~~~~--~~-----~~~~~~~~~D~~~ 604 (789)
+.|+||++||..+...... |..... ..|..+||.|+++|.||+ |..+..-... +. ......+++|+.+
T Consensus 108 ~~p~vvllHG~~~~~~~~~~w~~~~~~~~~L~~~~~~Vi~~D~~G~~~G~S~~~~~~~~~~~~~~~~~~f~~~t~~~~a~ 187 (444)
T 2vat_A 108 RDNCVIVCHTLTSSAHVTSWWPTLFGQGRAFDTSRYFIICLNYLGSPFGSAGPCSPDPDAEGQRPYGAKFPRTTIRDDVR 187 (444)
T ss_dssp SCCEEEEECCTTCCSCGGGTCGGGBSTTSSBCTTTCEEEEECCTTCSSSSSSTTSBCTTTC--CBCGGGCCCCCHHHHHH
T ss_pred CCCeEEEECCCCcccchhhHHHHhcCccchhhccCCEEEEecCCCCCCCCCCCCCCCcccccccccccccccccHHHHHH
Confidence 3589999999877654411 332211 124348999999999994 4332110000 00 0011246777777
Q ss_pred HHHHHHHcCCCCCCc-EEEEeeChHHHHHHHHHHhCCCceeEEEecCCccc
Q 003878 605 ASEYLISAGYTQSRK-LCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 654 (789)
Q Consensus 605 ~~~~L~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d 654 (789)
.+..+++. ...++ ++++|||+||.+++.++.++|++++++|+..+...
T Consensus 188 dl~~ll~~--l~~~~~~~lvGhSmGG~ial~~A~~~p~~v~~lVli~~~~~ 236 (444)
T 2vat_A 188 IHRQVLDR--LGVRQIAAVVGASMGGMHTLEWAFFGPEYVRKIVPIATSCR 236 (444)
T ss_dssp HHHHHHHH--HTCCCEEEEEEETHHHHHHHHHGGGCTTTBCCEEEESCCSB
T ss_pred HHHHHHHh--cCCccceEEEEECHHHHHHHHHHHhChHhhheEEEEecccc
Confidence 77777665 23457 99999999999999999999999999999887654
No 175
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=99.43 E-value=4.9e-12 Score=134.14 Aligned_cols=124 Identities=15% Similarity=0.038 Sum_probs=84.7
Q ss_pred EEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhc
Q 003878 510 QVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKG 589 (789)
Q Consensus 510 ~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~ 589 (789)
...++..+| .++.+...-+ ...|.||++||+++...... +..++..+||.|+++|.||.|.....
T Consensus 13 ~~~~~~~~g-~~l~y~~~G~------~~g~pvvllHG~~~~~~~~~----~~~~~~~~~~~vi~~D~~G~G~S~~~---- 77 (313)
T 1azw_A 13 QGSLKVDDR-HTLYFEQCGN------PHGKPVVMLHGGPGGGCNDK----MRRFHDPAKYRIVLFDQRGSGRSTPH---- 77 (313)
T ss_dssp EEEEECSSS-CEEEEEEEEC------TTSEEEEEECSTTTTCCCGG----GGGGSCTTTEEEEEECCTTSTTSBST----
T ss_pred cceEEcCCC-CEEEEEecCC------CCCCeEEEECCCCCccccHH----HHHhcCcCcceEEEECCCCCcCCCCC----
Confidence 344566688 8886654422 12356899999876442211 12334347999999999998764211
Q ss_pred ccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 590 GALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 590 ~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
......+++++.+.+..+++. ..-+++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 78 --~~~~~~~~~~~~~dl~~l~~~--l~~~~~~lvGhSmGg~ia~~~a~~~p~~v~~lvl~~~~ 136 (313)
T 1azw_A 78 --ADLVDNTTWDLVADIERLRTH--LGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIF 136 (313)
T ss_dssp --TCCTTCCHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred --cccccccHHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhChhheeEEEEeccc
Confidence 111234566776666666655 23358999999999999999999999999999987654
No 176
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=99.43 E-value=1.7e-12 Score=135.46 Aligned_cols=117 Identities=12% Similarity=-0.014 Sum_probs=78.9
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccC
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 594 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~ 594 (789)
..+| .+|.+... + ..|.||++||..+... .|... ...|.++||.|+++|+||.|..... .
T Consensus 9 ~~~g-~~l~y~~~---g-----~~~pvvllHG~~~~~~--~~~~~-~~~L~~~g~~vi~~D~~G~G~S~~~--------~ 68 (279)
T 1hkh_A 9 NSTP-IELYYEDQ---G-----SGQPVVLIHGYPLDGH--SWERQ-TRELLAQGYRVITYDRRGFGGSSKV--------N 68 (279)
T ss_dssp TTEE-EEEEEEEE---S-----SSEEEEEECCTTCCGG--GGHHH-HHHHHHTTEEEEEECCTTSTTSCCC--------S
T ss_pred CCCC-eEEEEEec---C-----CCCcEEEEcCCCchhh--HHhhh-HHHHHhCCcEEEEeCCCCCCCCCCC--------C
Confidence 3467 66654332 2 1244899999766533 34443 3455558999999999998764321 1
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC-ceeEEEecCCcc
Q 003878 595 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD-LFGCALAHVGVM 653 (789)
Q Consensus 595 ~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd-~f~a~v~~~p~~ 653 (789)
...+++++.+.+..+++. .+.+++.++|||+||.+++.++.++|+ +++++|+..|+.
T Consensus 69 ~~~~~~~~~~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~~v~~lvl~~~~~ 126 (279)
T 1hkh_A 69 TGYDYDTFAADLHTVLET--LDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLE 126 (279)
T ss_dssp SCCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHHCSTTEEEEEEESCCC
T ss_pred CCCCHHHHHHHHHHHHHh--cCCCceEEEEeChhHHHHHHHHHHcCccceeeEEEEccCC
Confidence 223455554444444443 234689999999999999999999999 999999887643
No 177
>4fol_A FGH, S-formylglutathione hydrolase; D-type esterase, oxidation sensor motif, esterase activity activation, esterase activity inhibition; 2.07A {Saccharomyces cerevisiae} PDB: 1pv1_A 3c6b_A* 4flm_A*
Probab=99.43 E-value=4.6e-13 Score=141.34 Aligned_cols=251 Identities=12% Similarity=0.059 Sum_probs=149.1
Q ss_pred cEEEEEEecC-CCceEEEEEEEecCCCC-----CCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeec--C
Q 003878 507 HVHQVFVPSK-DGSTKIPMFIVSKKNIK-----LDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIR--G 578 (789)
Q Consensus 507 ~~~~~~~~s~-dg~~~i~~~l~~p~~~~-----~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~R--G 578 (789)
...++++.|. -| .++.+.+|.|++.. ++++.|+|.+.||..+....+.-......++++.|.++++++.. +
T Consensus 13 ~~~~~~~~S~~l~-~~~~~~VyLPp~y~~~~~~~~~~~PVLYlLhG~~~~~~~w~~~~~~~~~~~~~~~~~v~p~~~p~~ 91 (299)
T 4fol_A 13 RLIKLSHNSNSTK-TSMNVNIYLPKHYYAQDFPRNKRIPTVFYLSGLTCTPDNASEKAFWQFQADKYGFAIVFPDTSPRG 91 (299)
T ss_dssp EEEEEEEECTTTS-SEEEEEEEECGGGGCC------CBCEEEEECCTTCCHHHHHHHSCHHHHHHHHTCEEEEECSSCCS
T ss_pred EEEEEEEECcccC-CceEEEEEcCCCCCccccccCCCcCEEEEECCCCCChHHHHHhchHhHHHHHcCchhhccCCCcce
Confidence 3456677764 57 89999999998753 35689999999998765433221122356677789999998742 1
Q ss_pred CCC-----------CChhHHhccccc--CCcchH-----HHHHHHHHHHH----HcCCCCCCcEEEEeeChHHHHHHHHH
Q 003878 579 GGE-----------YGEEWHKGGALA--KKQNCF-----DDFISASEYLI----SAGYTQSRKLCIEGGSNGGLLVGACI 636 (789)
Q Consensus 579 ~g~-----------~g~~~~~~~~~~--~~~~~~-----~D~~~~~~~L~----~~~~~d~~~i~i~G~S~GG~l~~~~~ 636 (789)
-.. .+..++...... .+...+ ++++..++.-. .+...++++.+|.|+||||+-|+.++
T Consensus 92 ~~~~~~~~~~~~~g~~~~~y~d~~~~p~~~~~~~~~~l~~EL~~~i~~~f~~~~~r~~~~r~~~~i~G~SMGG~gAl~~a 171 (299)
T 4fol_A 92 DEVANDPEGSWDFGQGAGFYLNATQEPYAQHYQMYDYIHKELPQTLDSHFNKNGDVKLDFLDNVAITGISMGGYGAICGY 171 (299)
T ss_dssp TTSCCCTTCCSSSBTTBCTTCBCCSHHHHTTCBHHHHHHTHHHHHHHHHHCC-----BCSSSSEEEEEBTHHHHHHHHHH
T ss_pred eecCCCcccccccccCCccccccccCccccCccHHHHHHHHhHHHHHHhcccccccccccccceEEEecCchHHHHHHHH
Confidence 100 011111111100 011122 33333333221 12235678999999999999999999
Q ss_pred HhC--CCceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEec
Q 003878 637 NQR--PDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTA 714 (789)
Q Consensus 637 ~~~--pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g 714 (789)
.++ |++|+++.+.+|.++........ ..+...+|... + ...+++|...+++. .....++++|.+|
T Consensus 172 l~~~~~~~~~~~~s~s~~~~p~~~~~~~--~~~~~~~g~~~--~---~~~~~d~~~l~~~~------~~~~~~~i~id~G 238 (299)
T 4fol_A 172 LKGYSGKRYKSCSAFAPIVNPSNVPWGQ--KAFKGYLGEEK--A---QWEAYDPCLLIKNI------RHVGDDRILIHVG 238 (299)
T ss_dssp HHTGGGTCCSEEEEESCCCCGGGSHHHH--HHHHHHTC----------CGGGCHHHHGGGS------CCCTTCCEEEEEE
T ss_pred HhCCCCCceEEEEecccccCcccccccc--cccccccccch--h---hhhhcCHHHHHHhc------ccCCCCceEEEec
Confidence 875 78999999999988754322100 00111223221 1 11334444333321 0013578999999
Q ss_pred CCCCCCCcH-HHHHHHHHHHHhhccCCCCCCCCCc--EEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHhCC
Q 003878 715 DHDDRVVPL-HSLKLLATMQYVLCTSLENSPQTNP--IIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKMLGA 785 (789)
Q Consensus 715 ~~D~~V~~~-~~~~~~~~L~~~~~~~~~~~~~~~~--~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l~~ 785 (789)
+.|...... .+..|.++++++ |.+ ++++..+|.+|... -......+.++|..++||+
T Consensus 239 ~~D~f~~~~l~~~~f~~a~~~~----------g~~~~~~~r~~~GydHsy~----f~~~fi~dhl~fha~~Lgl 298 (299)
T 4fol_A 239 DSDPFLEEHLKPELLLEAVKAT----------SWQDYVEIKKVHGFDHSYY----FVSTFVPEHAEFHARNLGL 298 (299)
T ss_dssp TTCTTHHHHTCTHHHHHHHTTS----------TTTTCEEEEEETTCCSSHH----HHHHHHHHHHHHHHHHTTC
T ss_pred CCCcchhhhcCHHHHHHHHHhc----------CCCceEEEEeCCCCCCCHH----HHHHHHHHHHHHHHHhcCC
Confidence 999875322 246788888876 655 88999998899742 1245677889999999986
No 178
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=99.43 E-value=2e-12 Score=135.80 Aligned_cols=206 Identities=15% Similarity=0.036 Sum_probs=123.7
Q ss_pred cEEEEEcCCC-CccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 003878 539 PCLLYGYGGF-NISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 617 (789)
Q Consensus 539 P~ll~~hGg~-~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~ 617 (789)
|.||++||.. +......|.......|. ++|.|+++|+||.|..... .....+++++.+.+..+++. .+.
T Consensus 37 ~~vvllHG~~~~~~~~~~~~~~~~~~l~-~~~~vi~~D~~G~G~S~~~-------~~~~~~~~~~~~~l~~~l~~--l~~ 106 (289)
T 1u2e_A 37 ETVVLLHGSGPGATGWANFSRNIDPLVE-AGYRVILLDCPGWGKSDSV-------VNSGSRSDLNARILKSVVDQ--LDI 106 (289)
T ss_dssp SEEEEECCCSTTCCHHHHTTTTHHHHHH-TTCEEEEECCTTSTTSCCC-------CCSSCHHHHHHHHHHHHHHH--TTC
T ss_pred ceEEEECCCCcccchhHHHHHhhhHHHh-cCCeEEEEcCCCCCCCCCC-------CccccCHHHHHHHHHHHHHH--hCC
Confidence 3899999964 22222233333325566 5699999999998764321 11135677777777776665 234
Q ss_pred CcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccccc---c---------c--cCCc----cchhh-cCCC--Cc
Q 003878 618 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYH---K---------F--TIGH----AWVSD-FGCS--EE 676 (789)
Q Consensus 618 ~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~---~---------~--~~~~----~~~~e-~g~p--~~ 676 (789)
+++.++|||+||.+++.++.++|++++++|+..|........ . . .... .+... ...+ ..
T Consensus 107 ~~~~lvGhS~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (289)
T 1u2e_A 107 AKIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGGGTGGMSLFTPMPTEGIKRLNQLYRQPTIENLKLMMDIFVFDTSDLT 186 (289)
T ss_dssp CCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCSCCCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTTSSCTTSCC
T ss_pred CceEEEEECHhHHHHHHHHHHCHHhhhEEEEECCCccccccccccchhhHHHHHHHHhcchHHHHHHHHHHhhcCcccCC
Confidence 689999999999999999999999999999887654211000 0 0 0000 00000 0111 00
Q ss_pred HH--------------HHHHHH-hc--C------cccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHH
Q 003878 677 EE--------------EFYWLI-KY--S------PLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQ 733 (789)
Q Consensus 677 ~~--------------~~~~l~-~~--s------P~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~ 733 (789)
++ .+..+. .+ . ....+.++ ..|+|+++|++|..+|+..+.++.+.+.
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~P~lii~G~~D~~~~~~~~~~~~~~~~ 256 (289)
T 1u2e_A 187 DALFEARLNNMLSRRDHLENFVKSLEANPKQFPDFGPRLAEI----------KAQTLIVWGRNDRFVPMDAGLRLLSGIA 256 (289)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHHHHHCSCCSCCCGGGGGGC----------CSCEEEEEETTCSSSCTHHHHHHHHHST
T ss_pred HHHHHHHHHHhhcChhHHHHHHHHHHhccccccchhhHHhhc----------CCCeEEEeeCCCCccCHHHHHHHHhhCC
Confidence 11 111110 10 0 11122222 6799999999999999999888776654
Q ss_pred HhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 734 YVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 734 ~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
. .++.+++++||....... .+..+.+.+||.
T Consensus 257 ~--------------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 287 (289)
T 1u2e_A 257 G--------------SELHIFRDCGHWAQWEHA--DAFNQLVLNFLA 287 (289)
T ss_dssp T--------------CEEEEESSCCSCHHHHTH--HHHHHHHHHHHT
T ss_pred C--------------cEEEEeCCCCCchhhcCH--HHHHHHHHHHhc
Confidence 3 378889999998643222 244556777764
No 179
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=99.42 E-value=4.8e-13 Score=143.49 Aligned_cols=202 Identities=16% Similarity=0.106 Sum_probs=123.9
Q ss_pred ccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 003878 538 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 617 (789)
Q Consensus 538 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~ 617 (789)
.|+||++||..+.... | ..++...||.|+++|+||.|.... ......+++++.+.+..+++. .+.
T Consensus 81 ~~~vv~~hG~~~~~~~--~----~~~~~~lg~~Vi~~D~~G~G~S~~-------~~~~~~~~~~~a~dl~~~l~~--l~~ 145 (330)
T 3p2m_A 81 APRVIFLHGGGQNAHT--W----DTVIVGLGEPALAVDLPGHGHSAW-------REDGNYSPQLNSETLAPVLRE--LAP 145 (330)
T ss_dssp CCSEEEECCTTCCGGG--G----HHHHHHSCCCEEEECCTTSTTSCC-------CSSCBCCHHHHHHHHHHHHHH--SST
T ss_pred CCeEEEECCCCCccch--H----HHHHHHcCCeEEEEcCCCCCCCCC-------CCCCCCCHHHHHHHHHHHHHH--hCC
Confidence 5789999998665332 2 334444699999999999775321 122345566776666666655 345
Q ss_pred CcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccccc------------------ccCCccchhhc--CCC-Cc
Q 003878 618 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRYHK------------------FTIGHAWVSDF--GCS-EE 676 (789)
Q Consensus 618 ~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~~~------------------~~~~~~~~~e~--g~p-~~ 676 (789)
+++.++|+|+||.+++.++.++|++++++|+..|......... +.........+ ..+ ..
T Consensus 146 ~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (330)
T 3p2m_A 146 GAEFVVGMSLGGLTAIRLAAMAPDLVGELVLVDVTPSALQRHAELTAEQRGTVALMHGEREFPSFQAMLDLTIAAAPHRD 225 (330)
T ss_dssp TCCEEEEETHHHHHHHHHHHHCTTTCSEEEEESCCHHHHHHHHHHTCC-----------CCBSCHHHHHHHHHHHCTTSC
T ss_pred CCcEEEEECHhHHHHHHHHHhChhhcceEEEEcCCCccchhhhhhhhhhhhhhhhhcCCccccCHHHHHHHHHhcCCCCC
Confidence 7899999999999999999999999999999987543211100 00000000000 001 11
Q ss_pred HHHH-HHHHhcC-------------cc----------cCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHH
Q 003878 677 EEEF-YWLIKYS-------------PL----------HNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATM 732 (789)
Q Consensus 677 ~~~~-~~l~~~s-------------P~----------~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L 732 (789)
.+.. ..+.... .+ ..+.+ ...|+|+++|++|..||+..+.++.+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~----------i~~PvLii~G~~D~~v~~~~~~~l~~~~ 295 (330)
T 3p2m_A 226 VKSLRRGVFHNSRRLDNGNWVWRYDAIRTFGDFAGLWDDVDA----------LSAPITLVRGGSSGFVTDQDTAELHRRA 295 (330)
T ss_dssp HHHHHHHHHTTEEECSSSCEEESSCCCSBCCCHHHHHHHHHH----------CCSCEEEEEETTCCSSCHHHHHHHHHHC
T ss_pred HHHHHHHHHhcccccCCCceEEeechhhCccccHHHHHHHhh----------CCCCEEEEEeCCCCCCCHHHHHHHHHhC
Confidence 1111 1111100 00 01111 2579999999999999998887776655
Q ss_pred HHhhccCCCCCCCCCcEE-EEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 733 QYVLCTSLENSPQTNPII-GRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 733 ~~~~~~~~~~~~~~~~~~-l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
.. .+ +.+++++||....... .+..+.+.+||.
T Consensus 296 ~~--------------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 328 (330)
T 3p2m_A 296 TH--------------FRGVHIVEKSGHSVQSDQP--RALIEIVRGVLD 328 (330)
T ss_dssp SS--------------EEEEEEETTCCSCHHHHCH--HHHHHHHHHHTT
T ss_pred CC--------------CeeEEEeCCCCCCcchhCH--HHHHHHHHHHHh
Confidence 32 35 8999999998643222 345556777764
No 180
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei structural genomics consortium, TBSGC, hydrolase; 1.19A {Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Probab=99.42 E-value=1.1e-12 Score=137.23 Aligned_cols=120 Identities=11% Similarity=0.011 Sum_probs=84.3
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.+| .+|.+... ++.|+||++||..+.... |.. ....|. .+|.|+++|+||.|.....- .....
T Consensus 15 ~~g-~~l~~~~~--------g~~~~vv~lHG~~~~~~~--~~~-~~~~l~-~~~~vi~~D~~G~G~S~~~~----~~~~~ 77 (297)
T 2qvb_A 15 IAG-KRMAYIDE--------GKGDAIVFQHGNPTSSYL--WRN-IMPHLE-GLGRLVACDLIGMGASDKLS----PSGPD 77 (297)
T ss_dssp ETT-EEEEEEEE--------SSSSEEEEECCTTCCGGG--GTT-TGGGGT-TSSEEEEECCTTSTTSCCCS----SCSTT
T ss_pred ECC-EEEEEEec--------CCCCeEEEECCCCchHHH--HHH-HHHHHh-hcCeEEEEcCCCCCCCCCCC----Ccccc
Confidence 478 88876543 234899999998765443 332 234555 56999999999987643210 00111
Q ss_pred cchHHHHHHHHHHHHHcCCCCC-CcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccc
Q 003878 596 QNCFDDFISASEYLISAGYTQS-RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 654 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~-~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d 654 (789)
..+++++.+.+..+++. .+. +++.++|+|+||.+++.++.++|++++++|+..|...
T Consensus 78 ~~~~~~~~~~~~~~l~~--~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~~ 135 (297)
T 2qvb_A 78 RYSYGEQRDFLFALWDA--LDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVT 135 (297)
T ss_dssp SSCHHHHHHHHHHHHHH--TTCCSCEEEEEEEHHHHHHHHHHHHSGGGEEEEEEEEECCS
T ss_pred CcCHHHHHHHHHHHHHH--cCCCCceEEEEeCchHHHHHHHHHhChHhhheeeEeccccC
Confidence 24566666666666654 234 6899999999999999999999999999999888664
No 181
>3gff_A IROE-like serine hydrolase; NP_718593.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.12A {Shewanella oneidensis}
Probab=99.42 E-value=1.1e-12 Score=140.66 Aligned_cols=225 Identities=12% Similarity=0.043 Sum_probs=143.6
Q ss_pred cEEEEEEecC-CCceEEEEEEEecCCCCC-CCCccEEEEEcCCCCccCCCCCCHHHHHHHHc------CCeEEEEEeecC
Q 003878 507 HVHQVFVPSK-DGSTKIPMFIVSKKNIKL-DGSHPCLLYGYGGFNISVTPSFSVSRTILMRH------LGAVFCIANIRG 578 (789)
Q Consensus 507 ~~~~~~~~s~-dg~~~i~~~l~~p~~~~~-~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~------~G~~v~~~~~RG 578 (789)
..+.+.+.|. -| .+..++++.|++..+ .+++|+|++.||..... . .......+.. .+++|+.++..
T Consensus 11 ~v~~~~~~S~~l~-~~r~~~VylP~~y~~~~~~yPVlylldG~~~f~---~-~~~~~~~l~~~~~~~~~~~IvV~i~~~- 84 (331)
T 3gff_A 11 EYQSKRLESRLLK-ETREYVIALPEGYAQSLEAYPVVYLLDGEDQFD---H-MASLLQFLSQGTMPQIPKVIIVGIHNT- 84 (331)
T ss_dssp CEEEEEEEETTTT-EEEEEEEECCTTGGGSCCCEEEEEESSHHHHHH---H-HHHHHHHHTCSSSCSSCCCEEEEECCS-
T ss_pred eEEEEEEEecCCC-CeEEEEEEeCCCCCCCCCCccEEEEecChhhhH---H-HHHHHHHHHhhhhcCCCCEEEEEECCC-
Confidence 4466667775 57 899999999999765 67899999999952110 0 1122344442 25788887651
Q ss_pred CCCCChhHHh-------cc------cc-cCCcchHHHHH--HHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCc
Q 003878 579 GGEYGEEWHK-------GG------AL-AKKQNCFDDFI--SASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL 642 (789)
Q Consensus 579 ~g~~g~~~~~-------~~------~~-~~~~~~~~D~~--~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~ 642 (789)
....++.- .| .. ..+...|.+++ ..+.++.++.-++++| +|+|+|+||++++.++.++|++
T Consensus 85 --~R~~dytp~~~~~~~~G~~~~~~~~~~g~~~~~~~~l~~el~p~i~~~~~~~~~r-~i~G~S~GG~~al~~~~~~p~~ 161 (331)
T 3gff_A 85 --NRMRDYTPTHTLVLPSGNKGNPQYQHTGGAGRFLDFIEKELAPSIESQLRTNGIN-VLVGHSFGGLVAMEALRTDRPL 161 (331)
T ss_dssp --SHHHHSCSSCCSBCTTSSBCCGGGGGCCCHHHHHHHHHHTHHHHHHHHSCEEEEE-EEEEETHHHHHHHHHHHTTCSS
T ss_pred --CcccccCCCccccccccccccccCCCCCcHHHHHHHHHHHHHHHHHHHCCCCCCe-EEEEECHHHHHHHHHHHhCchh
Confidence 11111100 00 00 12233455655 3556666665566655 8999999999999999999999
Q ss_pred eeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCC----
Q 003878 643 FGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDD---- 718 (789)
Q Consensus 643 f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~---- 718 (789)
|+++++.+|.+.+ .++ ...+.+... +..... ...|+++.+|+.|.
T Consensus 162 F~~~~~~S~~~w~----------------~~~---~~~~~~~~~--~~~~~~----------~~~~l~l~~G~~d~~~~~ 210 (331)
T 3gff_A 162 FSAYLALDTSLWF----------------DSP---HYLTLLEER--VVKGDF----------KQKQLFMAIANNPLSPGF 210 (331)
T ss_dssp CSEEEEESCCTTT----------------TTT---HHHHHHHHH--HHHCCC----------SSEEEEEEECCCSEETTT
T ss_pred hheeeEeCchhcC----------------ChH---HHHHHHHHH--hhcccC----------CCCeEEEEeCCCCCCCcc
Confidence 9999999996431 111 011111110 000111 14699999999998
Q ss_pred ---CCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 719 ---RVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 719 ---~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
+++..++.+++++|+.. ...|..+.+.++++++|+... ...+.+.+.||....
T Consensus 211 ~~~~~~~~~~~~l~~~Lk~~-------~~~g~~~~~~~~pg~~H~sv~-----~~~~~~~l~~lf~~~ 266 (331)
T 3gff_A 211 GVSSYHKDLNLAFADKLTKL-------APKGLGFMAKYYPEETHQSVS-----HIGLYDGIRHLFKDF 266 (331)
T ss_dssp EECCHHHHHHHHHHHHHHHH-------CCTTEEEEEEECTTCCTTTHH-----HHHHHHHHHHHHGGG
T ss_pred chHHHHHHHHHHHHHHHHhc-------cCCCceEEEEECCCCCccccH-----HHHHHHHHHHHHhhc
Confidence 68888899999999986 333678999999999998643 233456666766544
No 182
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, mycobac smegmatis; 1.90A {Mycobacterium smegmatis}
Probab=99.42 E-value=1.9e-12 Score=139.24 Aligned_cols=126 Identities=13% Similarity=0.055 Sum_probs=80.1
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCc
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 596 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~ 596 (789)
+| .++.+...-+.+. +.+.+.||++||+++.... |......+..+.||.|+++|.||.|.....- ......
T Consensus 36 ~g-~~l~y~~~G~~~~--~~~g~plvllHG~~~~~~~--w~~~~~~l~~~~~~~Via~D~rG~G~S~~~~----~~~~~~ 106 (330)
T 3nwo_A 36 GD-HETWVQVTTPENA--QPHALPLIVLHGGPGMAHN--YVANIAALADETGRTVIHYDQVGCGNSTHLP----DAPADF 106 (330)
T ss_dssp TT-EEEEEEEECCSSC--CTTCCCEEEECCTTTCCSG--GGGGGGGHHHHHTCCEEEECCTTSTTSCCCT----TSCGGG
T ss_pred cC-cEEEEEEecCccC--CCCCCcEEEECCCCCCchh--HHHHHHHhccccCcEEEEECCCCCCCCCCCC----CCcccc
Confidence 78 8888877665321 1112357888998776543 3333334443369999999999988643200 000111
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 597 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 597 ~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
.+++++.+-+..+++. ...+++.++|+|+||.+++.++.++|+++.++|+..+..
T Consensus 107 ~~~~~~a~dl~~ll~~--lg~~~~~lvGhSmGG~va~~~A~~~P~~v~~lvl~~~~~ 161 (330)
T 3nwo_A 107 WTPQLFVDEFHAVCTA--LGIERYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPA 161 (330)
T ss_dssp CCHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHTCCTTEEEEEEESCCS
T ss_pred ccHHHHHHHHHHHHHH--cCCCceEEEecCHHHHHHHHHHHhCCccceEEEEecCCc
Confidence 2344444444444333 123589999999999999999999999999998876543
No 183
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.42 E-value=2.9e-11 Score=150.50 Aligned_cols=324 Identities=10% Similarity=0.052 Sum_probs=184.2
Q ss_pred CCCceEeCCEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEE
Q 003878 83 YDAPFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKL 162 (789)
Q Consensus 83 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v 162 (789)
...|.+.++.++|.....+ ...||..+..++..+.|..... +..+.|||||++|||+. . .+|++
T Consensus 206 v~~~~~s~d~l~~~~~~dg--~~~l~~~~~~g~~~~~l~~~~~--------~~~~~~SpDG~~la~~~--~----~~i~~ 269 (1045)
T 1k32_A 206 VSSPVIVGHRIYFITDIDG--FGQIYSTDLDGKDLRKHTSFTD--------YYPRHLNTDGRRILFSK--G----GSIYI 269 (1045)
T ss_dssp CEEEEEETTEEEEEECTTS--SCEEEEEETTSCSCEECCCCCS--------SCEEEEEESSSCEEEEE--T----TEEEE
T ss_pred ccceEEeCCEEEEEEeccC--ceEEEEEeCCCCcceEecCCCC--------cceeeEcCCCCEEEEEe--C----CEEEE
Confidence 3445556777777765433 3458887654444444433221 23458999999999973 2 37999
Q ss_pred EEcCCCceecccccccccccccCccce---eeeeeccccc-cccccccccccceeeEEEeeeccccceeeeeeec-----
Q 003878 163 MRIEDQIVEADALSWVCFCFSHSFGYF---FHLTISLLNV-PTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVS----- 233 (789)
Q Consensus 163 ~dl~tg~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~----- 233 (789)
||++++... .+.... ....-++ ..-..+..+. |+++ .++|.+ .+...+|....
T Consensus 270 ~d~~~~~l~--~l~~~~---~~~~~~~~~~~~~v~~~~~S~pdG~-----------~la~~~--~~~i~~~~~~~~~~~~ 331 (1045)
T 1k32_A 270 FNPDTEKIE--KIEIGD---LESPEDRIISIPSKFAEDFSPLDGD-----------LIAFVS--RGQAFIQDVSGTYVLK 331 (1045)
T ss_dssp ECTTTCCEE--ECCCCC---CCBCCSEEEECGGGGEEEEEECGGG-----------CEEEEE--TTEEEEECTTSSBEEE
T ss_pred ecCCceEee--eeccCc---ccccccccccccccceeeecCCCCC-----------EEEEEE--cCEEEEEcCCCCceEE
Confidence 999655433 121100 0000000 0001234456 7886 344444 22212221111
Q ss_pred ----cc-ccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEE-EEECCCCCCCcEEEEecCCCCeeEEEEEE
Q 003878 234 ----QF-KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFY-YHFLGTKQSEDILCWKDPEHPKYIFSGHV 307 (789)
Q Consensus 234 ----~~-~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~lg~~~~~~~~~~~~~~~~~~~~~~~~ 307 (789)
.- ....++|+ ||+.|+|... ...++ ++++.+.... .+. .+...+..++|
T Consensus 332 ~~~~~~~~~~~~~~s-dg~~l~~~s~-------------------~~~l~~~~d~~~~~~~--~l~---~~~~~~~~~~~ 386 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-TKVAFIHGTR-------------------EGDFLGIYDYRTGKAE--KFE---ENLGNVFAMGV 386 (1045)
T ss_dssp CSCCSCEEEEEECSS-SEEEEEEEET-------------------TEEEEEEEETTTCCEE--ECC---CCCCSEEEEEE
T ss_pred ccCCCcceEEeeeEc-CCCeEEEEEC-------------------CCceEEEEECCCCCce--Eec---CCccceeeeEE
Confidence 11 34578999 9999998743 23688 8888764322 222 22234568999
Q ss_pred ecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-cccc-eeEEEecCCCEEEEEECCC-----
Q 003878 308 TEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDA-QYEVIANDDTVFTFLTNKD----- 380 (789)
Q Consensus 308 SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~~-~~~~~s~dG~~l~~~tn~~----- 380 (789)
||||++|++... ...|+++|++++. ...+.. .... ....|||||++|++.+...
T Consensus 387 SpDG~~la~~~~-----~~~v~~~d~~tg~--------------~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~ 447 (1045)
T 1k32_A 387 DRNGKFAVVAND-----RFEIMTVDLETGK--------------PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETD 447 (1045)
T ss_dssp CTTSSEEEEEET-----TSEEEEEETTTCC--------------EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTC
T ss_pred CCCCCEEEEECC-----CCeEEEEECCCCc--------------eEEeccCCCCCccceEECCCCCeEEEEecCcccccc
Confidence 999999997753 2479999998753 222331 1111 2345999999998876542
Q ss_pred -CCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCE-EEEEEEeCCe---------------EEEEEEECCC----
Q 003878 381 -APKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSDVK---------------YVLQIRDLKN---- 439 (789)
Q Consensus 381 -~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~-lv~~~~~~g~---------------~~L~~~dl~t---- 439 (789)
.....|+++|+++++ ...+..+. .....+.|++++. +++....++. ..++.+-+..
T Consensus 448 ~~~~~~i~l~d~~~g~-~~~l~~~~--~~~~~~~~spdG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 524 (1045)
T 1k32_A 448 GYVMQAIHVYDMEGRK-IFAATTEN--SHDYAPAFDADSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPN 524 (1045)
T ss_dssp SCCEEEEEEEETTTTE-EEECSCSS--SBEEEEEECTTSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCC
T ss_pred CCCCCeEEEEECCCCc-EEEeeCCC--cccCCceEcCCCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCC
Confidence 234689999998876 55665554 3455688888655 5444332211 1223322210
Q ss_pred -------------------Cce--eeecccCCeeEEEeecccCCcEEEE---------EEcCCCCCcEEEEEECCCCC
Q 003878 440 -------------------GSL--LHQLPIEIGSVNAISARREDSVVFI---------SFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 440 -------------------G~~--~~~l~~~~~~v~~~s~s~d~~~l~~---------~~ss~~~P~~ly~~dl~tg~ 487 (789)
|.. +..++.+.+.+..+++++|+..++. .+++...+..+++||+.+++
T Consensus 525 ~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~ 602 (1045)
T 1k32_A 525 PTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRK 602 (1045)
T ss_dssp GGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCC
T ss_pred ccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCc
Confidence 111 1122323466777888998865443 33567789999999999985
No 184
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.42 E-value=5.1e-11 Score=123.72 Aligned_cols=208 Identities=9% Similarity=0.015 Sum_probs=139.3
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC-CCCCcEEEEecCCCCeeEEEEEEecCCcEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT-KQSEDILCWKDPEHPKYIFSGHVTEDGQYLV 315 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~-~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~ 315 (789)
...++|||||+.|++... ..|+++++.+ ... ..+..... ...+..+.|||||++|+
T Consensus 44 v~~~~~spdg~~l~~~~~--------------------~~i~~~d~~~~~~~--~~~~~~~~-~~~~~~~~~spdg~~l~ 100 (297)
T 2ojh_A 44 FEAPNWSPDGKYLLLNSE--------------------GLLYRLSLAGDPSP--EKVDTGFA-TICNNDHGISPDGALYA 100 (297)
T ss_dssp CEEEEECTTSSEEEEEET--------------------TEEEEEESSSCCSC--EECCCTTC-CCBCSCCEECTTSSEEE
T ss_pred eEeeEECCCCCEEEEEcC--------------------CeEEEEeCCCCCCc--eEeccccc-cccccceEECCCCCEEE
Confidence 478999999999998631 2589999876 432 23332221 12334689999999999
Q ss_pred EEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 316 MCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 316 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
+...... ....||.+++.++. ...+..........|+|||+.|++....+ ...+|+.+++.++.
T Consensus 101 ~~~~~~~-~~~~l~~~~~~~~~--------------~~~~~~~~~~~~~~~spdg~~l~~~~~~~-~~~~l~~~~~~~~~ 164 (297)
T 2ojh_A 101 ISDKVEF-GKSAIYLLPSTGGT--------------PRLMTKNLPSYWHGWSPDGKSFTYCGIRD-QVFDIYSMDIDSGV 164 (297)
T ss_dssp EEECTTT-SSCEEEEEETTCCC--------------CEECCSSSSEEEEEECTTSSEEEEEEEET-TEEEEEEEETTTCC
T ss_pred EEEeCCC-CcceEEEEECCCCc--------------eEEeecCCCccceEECCCCCEEEEEECCC-CceEEEEEECCCCc
Confidence 8774322 35789999987642 12222222223346999999998776554 34689998887765
Q ss_pred CeEEeccCCCCceeeeEEEecCCE-EEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCC-
Q 003878 396 DWFEVIPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFL- 473 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~- 473 (789)
...+..+. ..+..+.|++++. +++....++..+|+.+++.+++. ..+......+..+.++++++.+++......
T Consensus 165 -~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 240 (297)
T 2ojh_A 165 -ETRLTHGE--GRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSV-ERITDSAYGDWFPHPSPSGDKVVFVSYDADV 240 (297)
T ss_dssp -EEECCCSS--SCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCE-EECCCCSEEEEEEEECTTSSEEEEEEEETTC
T ss_pred -ceEcccCC--CccccceECCCCCEEEEEecCCCCccEEEECCCCCCc-EEEecCCcccCCeEECCCCCEEEEEEcCCCC
Confidence 44554433 4567889988654 55555457777888888774443 566655566777889999998887654322
Q ss_pred ------CCcEEEEEECCCCC
Q 003878 474 ------IPGIVYQCNLKTET 487 (789)
Q Consensus 474 ------~P~~ly~~dl~tg~ 487 (789)
....++.+|+.+++
T Consensus 241 ~~~~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 241 FDHPRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp CSCCSSEEEEEEEEETTSCS
T ss_pred CcccccCceEEEEEecCCCC
Confidence 23679999998885
No 185
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.42 E-value=5.9e-11 Score=127.64 Aligned_cols=235 Identities=11% Similarity=0.026 Sum_probs=145.9
Q ss_pred EEEeEEeCCCCcEEEEEEecC----CceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccc
Q 003878 133 ALIKVSVSEDAKYLAYALSYS----GSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYL 208 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~----g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 208 (789)
.+..+++ ||++|||+.... ++...+|+++|+++++... +..
T Consensus 16 ~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~--l~~------------------------------- 60 (347)
T 2gop_A 16 YLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF--IEN------------------------------- 60 (347)
T ss_dssp EEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE--EES-------------------------------
T ss_pred EcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE--ccc-------------------------------
Confidence 4677788 999999987542 3447899999999986542 211
Q ss_pred ccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCC
Q 003878 209 RGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE 288 (789)
Q Consensus 209 ~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~ 288 (789)
...++|||||+.|+|..... .....+||++++.++.
T Consensus 61 ----------------------------~~~~~~SpDg~~la~~~~~~--------------~~~~~~l~~~~~~~g~-- 96 (347)
T 2gop_A 61 ----------------------------ATMPRISPDGKKIAFMRANE--------------EKKVSEIWVADLETLS-- 96 (347)
T ss_dssp ----------------------------CEEEEECTTSSEEEEEEEET--------------TTTEEEEEEEETTTTE--
T ss_pred ----------------------------CCCeEECCCCCEEEEEEecc--------------CCCcceEEEEECCCCc--
Confidence 37899999999999986542 1123469999887643
Q ss_pred cEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCC----------------------CCceEEEEEECCCCCCCccccccc
Q 003878 289 DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENC----------------------DPVNKVYYCDLSALPEGLEGFKKR 346 (789)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~----------------------~~~~~i~~~d~~~g~~~~~~~~~~ 346 (789)
...+...+ . +..+.|||||++|++...+.. .....||++++.++.
T Consensus 97 ~~~l~~~~---~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~--------- 163 (347)
T 2gop_A 97 SKKILEAK---N-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE--------- 163 (347)
T ss_dssp EEEEEEES---E-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE---------
T ss_pred eEEEEcCC---C-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe---------
Confidence 23344332 2 567899999999999875310 114679999998752
Q ss_pred CCCCccEeeeccccceeEEEecCCCEEEEEECCCC-----C-CceEEEEECCCCCCeEEeccCCCCceeeeEEEecC-CE
Q 003878 347 DGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDA-----P-KYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQ 419 (789)
Q Consensus 347 ~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~-----~-~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~-~~ 419 (789)
....+... ......|+||| +++.++.+. . ..+|+.++ +++ .+.+..+ ..+..+ +++ +.
T Consensus 164 ----~~~~l~~~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d--~~~-~~~l~~~---~~~~~~--spdg~~ 228 (347)
T 2gop_A 164 ----VIEEFEKP-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWE--DGK-EEKMFEK---VSFYAV--DSDGER 228 (347)
T ss_dssp ----EEEEEEEE-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEE--TTE-EEEEEEE---ESEEEE--EECSSC
T ss_pred ----EEeeecCC-CcccccCCCCe--EEEEEecccccccccccccEEEeC--CCc-eEEeccC---cceeeE--CCCCCE
Confidence 11222222 23345699999 666655432 1 56899999 444 5566544 223333 554 44
Q ss_pred EEEEEEeC-----CeEEEEEEECCCCceeeecccC-CeeEEE-eecccCCcEEEEEEcCCCCCcEEEEEE
Q 003878 420 MIVSYLSD-----VKYVLQIRDLKNGSLLHQLPIE-IGSVNA-ISARREDSVVFISFTSFLIPGIVYQCN 482 (789)
Q Consensus 420 lv~~~~~~-----g~~~L~~~dl~tG~~~~~l~~~-~~~v~~-~s~s~d~~~l~~~~ss~~~P~~ly~~d 482 (789)
+++..... ...+|+++| +|+. +.+... ...+.. +.++ |+ ++++.+. ..-..+| ++
T Consensus 229 l~~~~~~~~~~~~~~~~l~~~d--~~~~-~~l~~~~~~~~~~~~~~s-dg--~~~~~~~-~~~~~l~-~~ 290 (347)
T 2gop_A 229 ILLYGKPEKKYMSEHNKLYIYD--GKEV-MGILDEVDRGVGQAKIKD-GK--VYFTLFE-EGSVNLY-IW 290 (347)
T ss_dssp EEEEECCSSSCCCSSCEEEEEC--SSCE-EESSTTCCSEEEEEEEET-TE--EEEEEEE-TTEEEEE-EE
T ss_pred EEEEEccccCCccccceEEEEC--CCce-EeccccCCcccCCccEEc-Cc--EEEEEec-CCcEEEE-Ec
Confidence 55555433 135899999 4665 445433 456654 7777 66 5554332 2234666 66
No 186
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=99.42 E-value=1.4e-12 Score=136.72 Aligned_cols=120 Identities=11% Similarity=-0.021 Sum_probs=85.7
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccC
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 594 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~ 594 (789)
..+| .+|.+... ++.|.||++||..+.... |.. ....|. +||.|+++|.||.|.....-. ....
T Consensus 19 ~~~g-~~l~~~~~--------g~~~~vv~lHG~~~~~~~--~~~-~~~~l~-~~~~v~~~D~~G~G~S~~~~~---~~~~ 82 (306)
T 3r40_A 19 NTSS-GRIFARVG--------GDGPPLLLLHGFPQTHVM--WHR-VAPKLA-ERFKVIVADLPGYGWSDMPES---DEQH 82 (306)
T ss_dssp CCTT-CCEEEEEE--------ECSSEEEEECCTTCCGGG--GGG-THHHHH-TTSEEEEECCTTSTTSCCCCC---CTTC
T ss_pred EeCC-EEEEEEEc--------CCCCeEEEECCCCCCHHH--HHH-HHHHhc-cCCeEEEeCCCCCCCCCCCCC---Cccc
Confidence 4478 78876543 244799999998765433 443 346677 599999999999875432110 0000
Q ss_pred CcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 595 KQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 595 ~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
...+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..|.
T Consensus 83 ~~~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 138 (306)
T 3r40_A 83 TPYTKRAMAKQLIEAMEQ--LGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDIL 138 (306)
T ss_dssp GGGSHHHHHHHHHHHHHH--TTCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred CCCCHHHHHHHHHHHHHH--hCCCCEEEEEecchHHHHHHHHHhChhhccEEEEecCC
Confidence 134567777776666665 34468999999999999999999999999999998864
No 187
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.42 E-value=3.5e-11 Score=143.35 Aligned_cols=264 Identities=11% Similarity=0.063 Sum_probs=164.0
Q ss_pred eCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEe
Q 003878 139 VSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLF 218 (789)
Q Consensus 139 ~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 218 (789)
++|||++++|.....|.....||+++..+++.... +... .+
T Consensus 79 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l-ld~~-----------------~l--------------------- 119 (710)
T 2xdw_A 79 HFKKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVF-LDPN-----------------IL--------------------- 119 (710)
T ss_dssp CEEETTEEEEEEECSSCSSCEEEEESSTTSCCEEE-ECGG-----------------GG---------------------
T ss_pred CEEECCEEEEEEEcCCceEEEEEEEcCCCCCcEEE-ECHH-----------------Hh---------------------
Confidence 35999999999988887777999999877643210 0000 00
Q ss_pred eeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCC
Q 003878 219 SLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEH 298 (789)
Q Consensus 219 ~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~ 298 (789)
.+++.. ...+++|||||+.|+|+.... .....+|+++++.++......+ ....
T Consensus 120 --~~~~~~---------~~~~~~~SPDg~~la~~~~~~--------------G~~~~~i~v~d~~tg~~~~~~~-~~~~- 172 (710)
T 2xdw_A 120 --SDDGTV---------ALRGYAFSEDGEYFAYGLSAS--------------GSDWVTIKFMKVDGAKELPDVL-ERVK- 172 (710)
T ss_dssp --CTTSCE---------EEEEEEECTTSSEEEEEEEET--------------TCSCEEEEEEETTTTEEEEEEE-EEEC-
T ss_pred --ccCCCE---------EEEEEEECCCCCEEEEEEcCC--------------CCceEEEEEEECCCCCCCcccc-cCcc-
Confidence 000000 136899999999999997643 2233579999998764332222 1111
Q ss_pred CeeEEEEEEecCCcEEEEEEEcCC-----------CCceEEEEEECCCCCCCcccccccCCCCccEeeeccc--c--cee
Q 003878 299 PKYIFSGHVTEDGQYLVMCIEENC-----------DPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF--D--AQY 363 (789)
Q Consensus 299 ~~~~~~~~~SpDG~~l~~~~~~~~-----------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~--~--~~~ 363 (789)
+.+++|||||+.|++.+.+.. .....||++++.++... ...+.... . ...
T Consensus 173 ---~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~------------~~~v~~~~~~~~~~~~ 237 (710)
T 2xdw_A 173 ---FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSE------------DILCAEFPDEPKWMGG 237 (710)
T ss_dssp ---SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGG------------CEEEECCTTCTTCEEE
T ss_pred ---cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCccc------------ceEEeccCCCCeEEEE
Confidence 235899999999999886543 12457999999874210 01121211 1 113
Q ss_pred EEEecCCCEEEEEECCCCC-CceEEEEECCC------CC-CeEEeccCCCCceeeeEEEecCCEEEEEEEeCC-eEEEEE
Q 003878 364 EVIANDDTVFTFLTNKDAP-KYKIIRVDLKE------PN-DWFEVIPEAERDVLESATAVNLNQMIVSYLSDV-KYVLQI 434 (789)
Q Consensus 364 ~~~s~dG~~l~~~tn~~~~-~~~L~~~dl~~------~~-~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g-~~~L~~ 434 (789)
..|||||++|++.+++... ...|+.+|+++ +. .++.+..+.. .....++.. ++.+++....++ ..+|++
T Consensus 238 ~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~d-g~~l~~~s~~~~~~~~l~~ 315 (710)
T 2xdw_A 238 AELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFE-GEYDYVTNE-GTVFTFKTNRHSPNYRLIN 315 (710)
T ss_dssp EEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSS-SCEEEEEEE-TTEEEEEECTTCTTCEEEE
T ss_pred EEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCC-cEEEEEecc-CCEEEEEECCCCCCCEEEE
Confidence 4599999999998875433 67999999986 42 3677766553 222333332 367877766554 458999
Q ss_pred EECCCCce--eeecccC-C-eeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 435 RDLKNGSL--LHQLPIE-I-GSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 435 ~dl~tG~~--~~~l~~~-~-~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+++++++. .+.|..+ . ..+..+.++ +++.++++... ..-..++++++.+|+
T Consensus 316 ~d~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~lv~~~~~-~g~~~l~~~~~~~g~ 370 (710)
T 2xdw_A 316 IDFTDPEESKWKVLVPEHEKDVLEWVACV-RSNFLVLCYLH-DVKNTLQLHDLATGA 370 (710)
T ss_dssp EETTSCCGGGCEEEECCCSSCEEEEEEEE-TTTEEEEEEEE-TTEEEEEEEETTTCC
T ss_pred EeCCCCCcccceeccCCCCCCeEEEEEEE-cCCEEEEEEEE-CCEEEEEEEECCCCC
Confidence 99987642 2344433 2 356667776 35556666543 334578999987774
No 188
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.42 E-value=3.1e-11 Score=142.25 Aligned_cols=258 Identities=10% Similarity=0.047 Sum_probs=156.8
Q ss_pred EeCCE-EEEEEEcCCCCeeEEEEecCC--C-CCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecC-----CceEE
Q 003878 88 KRGNK-YFYFHNTGLQPQSVLYVQDSL--D-AKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYS-----GSDWA 158 (789)
Q Consensus 88 ~~g~~-~~~~~~~~~~~~~~~~~~~~~--~-~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~-----g~~~~ 158 (789)
++|++ ++|.... ...||+.+.. + ++.+.|..... ..+...+..++|||||++|+|+.... +....
T Consensus 88 PDg~~~la~~~~~----~~~l~~~~~~~~g~~~~~~l~~~~~--~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~ 161 (662)
T 3azo_A 88 PAGGPLLVFTHFG----DQRLYAFEPDAPGGAVPRPLTPVSA--VGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRR 161 (662)
T ss_dssp SSSSCEEEEEBTT----TCCEEEECTTSTTCCCCEECSCCCC--STTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEE
T ss_pred cCCCeEEEEEECC----CCeEEEEcCCCCCCCCCEeccCCcc--CCCCccccCcEECCCCCEEEEEEecccCCCCCCcee
Confidence 56888 8876543 2348888754 2 55555443210 00235678899999999999987541 13457
Q ss_pred EEEEEEcCC------Cceeccccc-ccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeee
Q 003878 159 TIKLMRIED------QIVEADALS-WVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSV 231 (789)
Q Consensus 159 ~i~v~dl~t------g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~ 231 (789)
+|+++|+.+ ++... +. ... .
T Consensus 162 ~i~~~~~~~~~~~~~~~~~~--l~~~~~---------------------~------------------------------ 188 (662)
T 3azo_A 162 FLAAVPLDGSAAADRSAVRE--LSDDAH---------------------R------------------------------ 188 (662)
T ss_dssp EEEEEETTSTTTTCGGGSEE--SSCSCS---------------------S------------------------------
T ss_pred EEEEEECCCCccccCCceeE--EEecCC---------------------C------------------------------
Confidence 999999998 54332 22 110 0
Q ss_pred ecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECC-CCC-CCcEEEEecCCCCeeEEEEEEec
Q 003878 232 VSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLG-TKQ-SEDILCWKDPEHPKYIFSGHVTE 309 (789)
Q Consensus 232 ~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg-~~~-~~~~~~~~~~~~~~~~~~~~~Sp 309 (789)
...+++|||||+.|+|...+.+.. .....+|+++++. ++. .+...+.... ......+.|||
T Consensus 189 ----~~~~~~~SpDG~~la~~~~~~~~~-----------~~~~~~i~~~d~~~~g~~~~~~~l~~~~--~~~~~~~~~sp 251 (662)
T 3azo_A 189 ----FVTGPRLSPDGRQAVWLAWDHPRM-----------PWEGTELKTARVTEDGRFADTRTLLGGP--EEAIAQAEWAP 251 (662)
T ss_dssp ----EECCCEECTTSSEEEEEEECTTCC-----------TTTCEEEEEEEECTTSCEEEEEEEEEET--TBCEEEEEECT
T ss_pred ----cccCceECCCCCEEEEEECCCCCC-----------CCCCcEEEEEEECCCCcccccEEeCCCC--CceEcceEECC
Confidence 146799999999999987543110 1234579999997 331 1223333332 22355789999
Q ss_pred CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecc-cc---------ceeEEEecCCCEEEEEECC
Q 003878 310 DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG-FD---------AQYEVIANDDTVFTFLTNK 379 (789)
Q Consensus 310 DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~-~~---------~~~~~~s~dG~~l~~~tn~ 379 (789)
||+ +++.+.... ...||+++++++. +..++.. .. .....++++|+ +++..+.
T Consensus 252 dg~-l~~~~~~~~--~~~l~~~~~~~~~--------------~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~-~~~~~~~ 313 (662)
T 3azo_A 252 DGS-LIVATDRTG--WWNLHRVDPATGA--------------ATQLCRREEEFAGPLWTPGMRWFAPLANGL-IAVVHGK 313 (662)
T ss_dssp TSC-EEEEECTTS--SCEEEEECTTTCC--------------EEESSCCSSBSSCCCCSTTCCSEEECTTSC-EEEEEBS
T ss_pred CCe-EEEEECCCC--CeEEEEEECCCCc--------------eeecccccccccCccccccCceEeEeCCCE-EEEEEEc
Confidence 999 666664432 4579999986642 1122111 00 11233567766 4555554
Q ss_pred CCCCceEEEEECCCCCCeEEeccCCCCceeeeE-EEecCCEEEEEEEe-CCeEEEEEEECCCCceeeec
Q 003878 380 DAPKYKIIRVDLKEPNDWFEVIPEAERDVLESA-TAVNLNQMIVSYLS-DVKYVLQIRDLKNGSLLHQL 446 (789)
Q Consensus 380 ~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v-~~~~~~~lv~~~~~-~g~~~L~~~dl~tG~~~~~l 446 (789)
...+|+.+|+++++ .+.+..+. ..+..+ ++.+ +.+++.... +....|+++++++|+. +.+
T Consensus 314 --~~~~l~~~d~~~~~-~~~l~~~~--~~~~~~~s~~~-~~~~~~~~~~~~~~~i~~~d~~~g~~-~~l 375 (662)
T 3azo_A 314 --GAAVLGILDPESGE-LVDAAGPW--TEWAATLTVSG-TRAVGVAASPRTAYEVVELDTVTGRA-RTI 375 (662)
T ss_dssp --SSCEEEEEETTTTE-EEECCSSC--CEEEEEEEEET-TEEEEEEEETTEEEEEEEEETTTCCE-EEE
T ss_pred --CccEEEEEECCCCc-EEEecCCC--CeEEEEEecCC-CEEEEEEcCCCCCCEEEEEECCCCce-EEe
Confidence 56899999998775 56664443 345566 6655 666665544 4456899999987765 444
No 189
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.41 E-value=3.9e-11 Score=128.38 Aligned_cols=240 Identities=14% Similarity=0.064 Sum_probs=159.4
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
+...+..+.++|+++.+|-+ +...+|++||+++++.+. .+... +.
T Consensus 79 h~~~v~~~~~~~~~~~l~s~-----s~D~~i~lWd~~~~~~~~-~~~~~---------------------~~-------- 123 (321)
T 3ow8_A 79 HQLGVVSVDISHTLPIAASS-----SLDAHIRLWDLENGKQIK-SIDAG---------------------PV-------- 123 (321)
T ss_dssp CSSCEEEEEECSSSSEEEEE-----ETTSEEEEEETTTTEEEE-EEECC---------------------TT--------
T ss_pred CCCCEEEEEECCCCCEEEEE-----eCCCcEEEEECCCCCEEE-EEeCC---------------------Cc--------
Confidence 44567889999999988733 334589999999986543 11111 00
Q ss_pred cceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCc
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED 289 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~ 289 (789)
....++|+|||+.|+.... ...+.++++.+...
T Consensus 124 --------------------------~~~~~~~spdg~~l~~g~~-------------------dg~v~i~~~~~~~~-- 156 (321)
T 3ow8_A 124 --------------------------DAWTLAFSPDSQYLATGTH-------------------VGKVNIFGVESGKK-- 156 (321)
T ss_dssp --------------------------CCCCEEECTTSSEEEEECT-------------------TSEEEEEETTTCSE--
T ss_pred --------------------------cEEEEEECCCCCEEEEEcC-------------------CCcEEEEEcCCCce--
Confidence 2467999999999986532 23588888876532
Q ss_pred EEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEEec
Q 003878 290 ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIAN 368 (789)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~ 368 (789)
...+.. +...+..++|+|||++|+....+ ..|.++|+.++. ....+..... .....|+|
T Consensus 157 ~~~~~~--~~~~v~~~~~spdg~~lasg~~d-----g~i~iwd~~~~~-------------~~~~~~~h~~~v~~l~~sp 216 (321)
T 3ow8_A 157 EYSLDT--RGKFILSIAYSPDGKYLASGAID-----GIINIFDIATGK-------------LLHTLEGHAMPIRSLTFSP 216 (321)
T ss_dssp EEEEEC--SSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTE-------------EEEEECCCSSCCCEEEECT
T ss_pred eEEecC--CCceEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCc-------------EEEEEcccCCceeEEEEcC
Confidence 222332 23346789999999999876643 348899998742 1222221111 12235899
Q ss_pred CCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeeccc
Q 003878 369 DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI 448 (789)
Q Consensus 369 dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~ 448 (789)
+|+.|+..+ .+..|..+|+.+++....+..+. ..+..+++++++..+++...++ .|.+||+.+++.+..+..
T Consensus 217 d~~~l~s~s----~dg~i~iwd~~~~~~~~~~~~h~--~~v~~~~~sp~~~~l~s~s~D~--~v~iwd~~~~~~~~~~~~ 288 (321)
T 3ow8_A 217 DSQLLVTAS----DDGYIKIYDVQHANLAGTLSGHA--SWVLNVAFCPDDTHFVSSSSDK--SVKVWDVGTRTCVHTFFD 288 (321)
T ss_dssp TSCEEEEEC----TTSCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEETTS--CEEEEETTTTEEEEEECC
T ss_pred CCCEEEEEc----CCCeEEEEECCCcceeEEEcCCC--CceEEEEECCCCCEEEEEeCCC--cEEEEeCCCCEEEEEEcC
Confidence 998776433 24578899998776333443343 4578899998777888888887 689999998887666665
Q ss_pred CCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEEC
Q 003878 449 EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNL 483 (789)
Q Consensus 449 ~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl 483 (789)
....|..+.++++++.++- .+ .-+.+..||.
T Consensus 289 h~~~v~~v~~s~~g~~l~s-~~---~d~~i~vwd~ 319 (321)
T 3ow8_A 289 HQDQVWGVKYNGNGSKIVS-VG---DDQEIHIYDC 319 (321)
T ss_dssp CSSCEEEEEECTTSSEEEE-EE---TTCCEEEEEC
T ss_pred CCCcEEEEEECCCCCEEEE-Ee---CCCeEEEEeC
Confidence 6677888999999886653 22 2345666664
No 190
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase; 0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB: 1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A 1iz8_A* 1k5p_A 1k63_A 1k6e_A
Probab=99.41 E-value=1.5e-12 Score=136.66 Aligned_cols=121 Identities=9% Similarity=0.002 Sum_probs=85.0
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccC
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 594 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~ 594 (789)
..+| .+|.+... ++.|+||++||..+.... |.. ....|. .+|.|+++|+||.|.....- ....
T Consensus 15 ~~~g-~~l~~~~~--------g~~~~vv~lHG~~~~~~~--~~~-~~~~L~-~~~~vi~~D~~G~G~S~~~~----~~~~ 77 (302)
T 1mj5_A 15 EIKG-RRMAYIDE--------GTGDPILFQHGNPTSSYL--WRN-IMPHCA-GLGRLIACDLIGMGDSDKLD----PSGP 77 (302)
T ss_dssp EETT-EEEEEEEE--------SCSSEEEEECCTTCCGGG--GTT-TGGGGT-TSSEEEEECCTTSTTSCCCS----SCST
T ss_pred EECC-EEEEEEEc--------CCCCEEEEECCCCCchhh--hHH-HHHHhc-cCCeEEEEcCCCCCCCCCCC----CCCc
Confidence 4478 88876543 224899999998765433 332 234455 55899999999987643210 0011
Q ss_pred CcchHHHHHHHHHHHHHcCCCCC-CcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccc
Q 003878 595 KQNCFDDFISASEYLISAGYTQS-RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 654 (789)
Q Consensus 595 ~~~~~~D~~~~~~~L~~~~~~d~-~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d 654 (789)
...+++|+.+.+..+++. .+. +++.++|+|+||.+++.++.++|++++++|+..|...
T Consensus 78 ~~~~~~~~~~~~~~~l~~--l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 136 (302)
T 1mj5_A 78 ERYAYAEHRDYLDALWEA--LDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAM 136 (302)
T ss_dssp TSSCHHHHHHHHHHHHHH--TTCTTCEEEEEEHHHHHHHHHHHHHTGGGEEEEEEEEECCS
T ss_pred ccccHHHHHHHHHHHHHH--hCCCceEEEEEECCccHHHHHHHHHCHHHHhheeeecccCC
Confidence 124677777777666665 234 7899999999999999999999999999999887653
No 191
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.41 E-value=1.7e-10 Score=123.78 Aligned_cols=249 Identities=8% Similarity=0.002 Sum_probs=157.8
Q ss_pred EEeEEeCCCCcEEEEEEecCC---ceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccc
Q 003878 134 LIKVSVSEDAKYLAYALSYSG---SDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRG 210 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g---~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 210 (789)
...+++||||++|+++.. .| ....+|+++|+++++.+.. +... .
T Consensus 43 ~~~~~~s~dg~~l~~~~~-~~~~~~~~~~v~~~d~~~~~~~~~-~~~~----------------------~--------- 89 (353)
T 3vgz_A 43 AYEMAYSQQENALWLATS-QSRKLDKGGVVYRLDPVTLEVTQA-IHND----------------------L--------- 89 (353)
T ss_dssp EEEEEEETTTTEEEEEEC-CCTTTEESEEEEEECTTTCCEEEE-EEES----------------------S---------
T ss_pred ccceEECCCCCEEEEEcC-CCcCCCCCccEEEEcCCCCeEEEE-EecC----------------------C---------
Confidence 457889999999965543 32 1357899999999976532 1110 0
Q ss_pred ceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcE
Q 003878 211 IFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDI 290 (789)
Q Consensus 211 ~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~ 290 (789)
....++|+|||+.++++... ...|+++++.+....
T Consensus 90 -------------------------~~~~~~~s~dg~~l~v~~~~------------------~~~v~~~d~~~~~~~-- 124 (353)
T 3vgz_A 90 -------------------------KPFGATINNTTQTLWFGNTV------------------NSAVTAIDAKTGEVK-- 124 (353)
T ss_dssp -------------------------CCCSEEEETTTTEEEEEETT------------------TTEEEEEETTTCCEE--
T ss_pred -------------------------CcceEEECCCCCEEEEEecC------------------CCEEEEEeCCCCeeE--
Confidence 23679999999998887432 236888888765432
Q ss_pred EEEecCCC-------CeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-ccccce
Q 003878 291 LCWKDPEH-------PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFDAQ 362 (789)
Q Consensus 291 ~~~~~~~~-------~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~~~~~~ 362 (789)
..+..... +.....+.+||||+++++..... ...|+++|++++. ....+. .+....
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~---~~~i~~~d~~~~~-------------~~~~~~~~~~~~~ 188 (353)
T 3vgz_A 125 GRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGK---ESVIWVVDGGNIK-------------LKTAIQNTGKMST 188 (353)
T ss_dssp EEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESS---SCEEEEEETTTTE-------------EEEEECCCCTTCC
T ss_pred EEEecCCCccccccCCCCCceEEECCCCCEEEEEecCC---CceEEEEcCCCCc-------------eEEEecCCCCccc
Confidence 22222111 11245789999999988776432 3669999998742 111111 111122
Q ss_pred eEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEecc-C-CCCceeeeEEEecCC-EEEEEEEeCCeEEEEEEECCC
Q 003878 363 YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP-E-AERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKN 439 (789)
Q Consensus 363 ~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~-~-~~~~~i~~v~~~~~~-~lv~~~~~~g~~~L~~~dl~t 439 (789)
...|+|||+.+|+... +..|+.+|+.+++....+.. . .......++.+++++ .+++.... ...|++||+++
T Consensus 189 ~~~~s~dg~~l~~~~~----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~--~~~v~~~d~~~ 262 (353)
T 3vgz_A 189 GLALDSEGKRLYTTNA----DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSK--AAEVLVVDTRN 262 (353)
T ss_dssp CCEEETTTTEEEEECT----TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESS--SSEEEEEETTT
T ss_pred eEEECCCCCEEEEEcC----CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCC--CCEEEEEECCC
Confidence 3458999999887532 46899999988762222221 1 123345678888754 45554432 24899999998
Q ss_pred CceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 440 GSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 440 G~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
++....+..+.. ..+.++++++.++++.. ....++.+|..+++
T Consensus 263 ~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~---~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 263 GNILAKVAAPES--LAVLFNPARNEAYVTHR---QAGKVSVIDAKSYK 305 (353)
T ss_dssp CCEEEEEECSSC--CCEEEETTTTEEEEEET---TTTEEEEEETTTTE
T ss_pred CcEEEEEEcCCC--ceEEECCCCCEEEEEEC---CCCeEEEEECCCCe
Confidence 887666665432 24667899998877643 23689999998884
No 192
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.41 E-value=9.4e-11 Score=126.80 Aligned_cols=205 Identities=10% Similarity=0.030 Sum_probs=133.2
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|+||+ .|+.... ...|++|++.++.......+....+...+..++|||||++|+.
T Consensus 85 v~~~~~s~d~-~l~~~s~-------------------dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~s 144 (344)
T 4gqb_B 85 VADLTWVGER-GILVASD-------------------SGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVS 144 (344)
T ss_dssp EEEEEEETTT-EEEEEET-------------------TSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEE
T ss_pred EEEEEEeCCC-eEEEEEC-------------------CCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEE
Confidence 4689999996 4554432 2358899998765443333222233445778999999999987
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
.+.+ ..|.++|+.++. ....+........ ..|++++..+++.... +..|..+|+.+++
T Consensus 145 gs~d-----~~i~iwd~~~~~-------------~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~---D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 145 GSKD-----ICIKVWDLAQQV-------------VLSSYRAHAAQVTCVAASPHKDSVFLSCSE---DNRILLWDTRCPK 203 (344)
T ss_dssp EETT-----SCEEEEETTTTE-------------EEEEECCCSSCEEEEEECSSCTTEEEEEET---TSCEEEEETTSSS
T ss_pred EeCC-----CeEEEEECCCCc-------------EEEEEcCcCCceEEEEecCCCCCceeeecc---ccccccccccccc
Confidence 6543 348889998742 1222222222222 3488888766554433 3578899998876
Q ss_pred CeEEeccCCCCceeeeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCC
Q 003878 396 DWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLI 474 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~ 474 (789)
....+........+..+.+++ ++.++++...++ .|++||+.+++.+..+..+...|..+.++|++..++++.+.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg--~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~--- 278 (344)
T 4gqb_B 204 PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENG--TVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSE--- 278 (344)
T ss_dssp CEEECC----CCCEEEEEECSSCTTEEEEEETTS--EEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEET---
T ss_pred eeeeeecceeeccceeeeecCCCCcceEEeccCC--cEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeC---
Confidence 444444333344567888886 356888888887 78999999888767777667778889999998766655442
Q ss_pred CcEEEEEECCCCC
Q 003878 475 PGIVYQCNLKTET 487 (789)
Q Consensus 475 P~~ly~~dl~tg~ 487 (789)
-.+++.||+.+++
T Consensus 279 D~~i~vwd~~~~~ 291 (344)
T 4gqb_B 279 DCSLAVLDSSLSE 291 (344)
T ss_dssp TSCEEEECTTCCE
T ss_pred CCeEEEEECCCCc
Confidence 3578999998873
No 193
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=99.40 E-value=2.8e-12 Score=133.08 Aligned_cols=104 Identities=13% Similarity=0.070 Sum_probs=76.3
Q ss_pred CccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCC
Q 003878 537 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 616 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d 616 (789)
+.|.||++||..+.... |.. ....|. .+|.|+++|.||.|..... .....+++++.+.+..+++. ..
T Consensus 15 ~g~~vvllHG~~~~~~~--~~~-~~~~L~-~~~~vi~~Dl~G~G~S~~~-------~~~~~~~~~~~~dl~~~l~~--l~ 81 (269)
T 2xmz_A 15 TNQVLVFLHGFLSDSRT--YHN-HIEKFT-DNYHVITIDLPGHGEDQSS-------MDETWNFDYITTLLDRILDK--YK 81 (269)
T ss_dssp CSEEEEEECCTTCCGGG--GTT-THHHHH-TTSEEEEECCTTSTTCCCC-------TTSCCCHHHHHHHHHHHHGG--GT
T ss_pred CCCeEEEEcCCCCcHHH--HHH-HHHHHh-hcCeEEEecCCCCCCCCCC-------CCCccCHHHHHHHHHHHHHH--cC
Confidence 34569999998776544 333 235566 5699999999998864321 01134677777777666665 23
Q ss_pred CCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 617 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 617 ~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
.+++.++|||+||.+++.++.++|++++++|+..|..
T Consensus 82 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~~ 118 (269)
T 2xmz_A 82 DKSITLFGYSMGGRVALYYAINGHIPISNLILESTSP 118 (269)
T ss_dssp TSEEEEEEETHHHHHHHHHHHHCSSCCSEEEEESCCS
T ss_pred CCcEEEEEECchHHHHHHHHHhCchheeeeEEEcCCc
Confidence 4689999999999999999999999999999887644
No 194
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid indole alkaloids, PNAE, hydrolase, serine esterase; HET: CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Probab=99.40 E-value=6.6e-12 Score=130.25 Aligned_cols=106 Identities=14% Similarity=0.194 Sum_probs=74.9
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 615 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~ 615 (789)
+..|.||++||..+... .|... ...|.++||.|+++|.||.|..... .....+++++.+.+..+++.-.
T Consensus 8 ~~g~~vvllHG~~~~~~--~w~~~-~~~L~~~g~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~- 76 (264)
T 2wfl_A 8 KQQKHFVLVHGGCLGAW--IWYKL-KPLLESAGHKVTAVDLSAAGINPRR-------LDEIHTFRDYSEPLMEVMASIP- 76 (264)
T ss_dssp -CCCEEEEECCTTCCGG--GGTTH-HHHHHHTTCEEEEECCTTSTTCSCC-------GGGCCSHHHHHHHHHHHHHHSC-
T ss_pred CCCCeEEEECCCccccc--hHHHH-HHHHHhCCCEEEEeecCCCCCCCCC-------cccccCHHHHHHHHHHHHHHhC-
Confidence 45688999999865443 34443 4455448999999999998764321 1112456666666555555411
Q ss_pred CCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 616 QSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 616 d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
..+++.++|||+||.++..++.++|++++++|+..+.
T Consensus 77 ~~~~~~lvGhSmGG~va~~~a~~~p~~v~~lvl~~~~ 113 (264)
T 2wfl_A 77 PDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAM 113 (264)
T ss_dssp TTCCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSC
T ss_pred CCCCeEEEEeChHHHHHHHHHHhChhhhceeEEEeec
Confidence 1258999999999999999999999999999987653
No 195
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.40 E-value=5.2e-11 Score=141.47 Aligned_cols=277 Identities=12% Similarity=0.083 Sum_probs=162.9
Q ss_pred CEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCC---
Q 003878 91 NKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED--- 167 (789)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~t--- 167 (789)
+++.|..+ ..||+.+..+++...++.... .+..++|||||++|||+.+ .+|++||+.+
T Consensus 93 ~~~~~~~~------~~i~~~d~~~~~~~~l~~~~~-------~~~~~~~SpdG~~la~~~~------~~i~v~~~~~~~~ 153 (706)
T 2z3z_A 93 GLVVLFTQ------GGLVGFDMLARKVTYLFDTNE-------ETASLDFSPVGDRVAYVRN------HNLYIARGGKLGE 153 (706)
T ss_dssp TEEEEEET------TEEEEEETTTTEEEEEECCTT-------CCTTCEECTTSSEEEEEET------TEEEEEECBCTTS
T ss_pred CeEEEEEC------CEEEEEECCCCceEEccCCcc-------cccCCcCCCCCCEEEEEEC------CeEEEEecCcccc
Confidence 56666532 346666654454444443321 2456889999999999632 3799999998
Q ss_pred --CceecccccccccccccCccceeee---------eeccccccccccccccccceeeEEEeee-c--------------
Q 003878 168 --QIVEADALSWVCFCFSHSFGYFFHL---------TISLLNVPTYKLFLYLRGIFFFFYLFSL-V-------------- 221 (789)
Q Consensus 168 --g~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~p~~~~~~~~~~~~~~~~~~~s-~-------------- 221 (789)
++......... ...+..+ ..+..+.|+++ +++|.+ |
T Consensus 154 ~~g~~~~~~~~~~-------~~~~~g~~~~~ee~~~~~~~~~SpDg~-----------~la~~~~d~~~~~~~~~~~~~~ 215 (706)
T 2z3z_A 154 GMSRAIAVTIDGT-------ETLVYGQAVHQREFGIEKGTFWSPKGS-----------CLAFYRMDQSMVKPTPIVDYHP 215 (706)
T ss_dssp CCCCCEESCSCCB-------TTEEESSCCGGGCTTCCCSEEECTTSS-----------EEEEEEEECTTSCCEEEEECCS
T ss_pred cCCCcEEeccCCC-------CCeEcccchhhhhcCCCceEEECCCCC-----------EEEEEEECCCCCceEEeeccCC
Confidence 76543211111 0000000 24567889997 344433 1
Q ss_pred ---------------cccceeeeeeec------c--------cccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCC
Q 003878 222 ---------------KSTIYSFWSVVS------Q--------FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSN 272 (789)
Q Consensus 222 ---------------~~g~~~l~~~~~------~--------~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~ 272 (789)
..+..+||..+. . .....++|||||+.|++...+. ..
T Consensus 216 ~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~--------------~~ 281 (706)
T 2z3z_A 216 LEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNR--------------AQ 281 (706)
T ss_dssp SSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECT--------------TS
T ss_pred CCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCC--------------CC
Confidence 123345555444 1 1124789999999999976543 12
Q ss_pred cccEEEEEECCCCCCCcEEEEecCCCCee---EEEEEEec--CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccC
Q 003878 273 LYHEFYYHFLGTKQSEDILCWKDPEHPKY---IFSGHVTE--DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD 347 (789)
Q Consensus 273 ~~~~i~~~~lg~~~~~~~~~~~~~~~~~~---~~~~~~Sp--DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~ 347 (789)
....|+++++.++... ..+..... ..+ ...+.||| ||++|+.. ... ....||.++.+++.
T Consensus 282 ~~~~v~~~d~~~g~~~-~~~~~~~~-~~~~~~~~~~~~sp~~dg~~l~~~-~~~--g~~~l~~~~~~~~~---------- 346 (706)
T 2z3z_A 282 NECKVNAYDAETGRFV-RTLFVETD-KHYVEPLHPLTFLPGSNNQFIWQS-RRD--GWNHLYLYDTTGRL---------- 346 (706)
T ss_dssp CEEEEEEEETTTCCEE-EEEEEEEC-SSCCCCCSCCEECTTCSSEEEEEE-CTT--SSCEEEEEETTSCE----------
T ss_pred CeeEEEEEECCCCcee-eEEEEccC-CCeECccCCceeecCCCCEEEEEE-ccC--CccEEEEEECCCCE----------
Confidence 3357899998775222 22332211 111 13468999 99966533 322 25789999865421
Q ss_pred CCCccEeeecccccee--EEEecCCCEEEEEECCCC-CCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCC-EEEEE
Q 003878 348 GLLPFVKLIDGFDAQY--EVIANDDTVFTFLTNKDA-PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVS 423 (789)
Q Consensus 348 ~~~~~~~l~~~~~~~~--~~~s~dG~~l~~~tn~~~-~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~-~lv~~ 423 (789)
...+..+..... ..|+|||+.|++.++.+. ...+|+.+++++++ .+.+. +. ..+..+++++++ .+++.
T Consensus 347 ----~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~~~-~~~l~-~~--~~~~~~~~spdg~~l~~~ 418 (706)
T 2z3z_A 347 ----IRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIKGGK-TKDLT-PE--SGMHRTQLSPDGSAIIDI 418 (706)
T ss_dssp ----EEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETTCCC-CEESC-CS--SSEEEEEECTTSSEEEEE
T ss_pred ----EEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcCCCC-ceecc-CC--CceEEEEECCCCCEEEEE
Confidence 223333222122 459999999999887643 24699999998876 45554 33 235678898864 45555
Q ss_pred EEeC-CeEEEEEEECCCCc
Q 003878 424 YLSD-VKYVLQIRDLKNGS 441 (789)
Q Consensus 424 ~~~~-g~~~L~~~dl~tG~ 441 (789)
.... ...+|++||+++++
T Consensus 419 ~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 419 FQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp EECSSCSCEEEEEESSSCE
T ss_pred ecCCCCCcEEEEEECCCCe
Confidence 4443 34589999998765
No 196
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.40 E-value=9.6e-11 Score=126.11 Aligned_cols=284 Identities=10% Similarity=0.000 Sum_probs=179.1
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
..+..+++||||++||.+.. ...|++||+.+++.+. .+... .+.. .+..+.|++
T Consensus 33 ~~v~~~~~s~~~~~l~~~~~-----dg~i~vwd~~~~~~~~-~~~~h-------~~~v----~~~~~~~~~--------- 86 (369)
T 3zwl_B 33 RPLTQVKYNKEGDLLFSCSK-----DSSASVWYSLNGERLG-TLDGH-------TGTI----WSIDVDCFT--------- 86 (369)
T ss_dssp SCEEEEEECTTSCEEEEEES-----SSCEEEEETTTCCEEE-EECCC-------SSCE----EEEEECTTS---------
T ss_pred ceEEEEEEcCCCCEEEEEeC-----CCEEEEEeCCCchhhh-hhhhc-------CCcE----EEEEEcCCC---------
Confidence 45788999999999986542 3379999999986553 12111 1111 122233555
Q ss_pred eeeEEEeeeccccceeeeeeec---------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEEC
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVS---------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFL 282 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~---------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 282 (789)
.+++++..+|...+|.+.. ......++|+||++.|+....+. ......|.++++
T Consensus 87 ---~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~--------------~~~~g~i~~~d~ 149 (369)
T 3zwl_B 87 ---KYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNV--------------MKNPGSINIYEI 149 (369)
T ss_dssp ---SEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCB--------------TTBCCEEEEEEE
T ss_pred ---CEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCc--------------cCCCCEEEEEEe
Confidence 3667788899999998654 22346789999999998875431 122345777776
Q ss_pred CCCCCCcEEE---------EecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccE
Q 003878 283 GTKQSEDILC---------WKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFV 353 (789)
Q Consensus 283 g~~~~~~~~~---------~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~ 353 (789)
.+......+. .........+..+.|+|||++|+.... ...|+++|+.+.. ....
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-----dg~i~i~d~~~~~------------~~~~ 212 (369)
T 3zwl_B 150 ERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHK-----DGKISKYDVSNNY------------EYVD 212 (369)
T ss_dssp EECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEET-----TSEEEEEETTTTT------------EEEE
T ss_pred cCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcC-----CCEEEEEECCCCc------------EeEE
Confidence 5543221111 111111124668899999999987653 3568999998621 1122
Q ss_pred eeeccccc-eeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCe---
Q 003878 354 KLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVK--- 429 (789)
Q Consensus 354 ~l~~~~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~--- 429 (789)
.+...... ....|+|+|+.|+..+. +..|..+|+.+++ ....+.. ...+..+.+++++..++....++.
T Consensus 213 ~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~v~d~~~~~-~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~ 285 (369)
T 3zwl_B 213 SIDLHEKSISDMQFSPDLTYFITSSR----DTNSFLVDVSTLQ-VLKKYET--DCPLNTAVITPLKEFIILGGGQEAKDV 285 (369)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCC-EEEEEEC--SSCEEEEEECSSSSEEEEEECCC----
T ss_pred EEecCCCceeEEEECCCCCEEEEecC----CceEEEEECCCCc-eeeeecC--CCCceeEEecCCCceEEEeecCCCceE
Confidence 22221111 22348999998876543 3579999998876 2333333 245778888886555555554431
Q ss_pred ---------EEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 430 ---------YVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 430 ---------~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
..+.+|++.+++....+..+...+..+.++++++.++... .-+.+..|++.++
T Consensus 286 ~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~----~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 286 TTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGG----EDGFIRLHHFEKS 347 (369)
T ss_dssp ---------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEE----TTSEEEEEEECHH
T ss_pred EEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEc----CCCeEEEEECccc
Confidence 1689999988887666666667788899999998665432 2468888888664
No 197
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein, structural genomics, protein structure initiative, PSI; HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB: 1y7i_A* 1y7h_A*
Probab=99.38 E-value=1.1e-11 Score=129.39 Aligned_cols=215 Identities=14% Similarity=0.119 Sum_probs=127.2
Q ss_pred ccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 003878 538 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 617 (789)
Q Consensus 538 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~ 617 (789)
.|.||++||..+... .|... ...|.++||.|+.+|.||.|..... .....+++++.+.+..+++.-. ..
T Consensus 4 ~~~vvllHG~~~~~~--~w~~~-~~~L~~~g~rVia~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~-~~ 72 (273)
T 1xkl_A 4 GKHFVLVHGACHGGW--SWYKL-KPLLEAAGHKVTALDLAASGTDLRK-------IEELRTLYDYTLPLMELMESLS-AD 72 (273)
T ss_dssp CCEEEEECCTTCCGG--GGTTH-HHHHHHTTCEEEECCCTTSTTCCCC-------GGGCCSHHHHHHHHHHHHHTSC-SS
T ss_pred CCeEEEECCCCCCcc--hHHHH-HHHHHhCCCEEEEecCCCCCCCccC-------cccccCHHHHHHHHHHHHHHhc-cC
Confidence 378999999865443 34443 4556548999999999998764321 1112457777766666666521 13
Q ss_pred CcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccc---------ccccccCCccchh----hcC------------
Q 003878 618 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDML---------RYHKFTIGHAWVS----DFG------------ 672 (789)
Q Consensus 618 ~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~---------~~~~~~~~~~~~~----e~g------------ 672 (789)
+++.++|||+||.++..++.++|++++++|+..+..... ..........|.. .++
T Consensus 73 ~~~~lvGhSmGG~va~~~a~~~P~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (273)
T 1xkl_A 73 EKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPDSVHNSSFVLEQYNERTPAENWLDTQFLPYGSPEEPLTSMFFG 152 (273)
T ss_dssp SCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCCCCCSSSCTTHHHHHHHHTSCTTTTTTCEEEECSCTTSCCEEEECC
T ss_pred CCEEEEecCHHHHHHHHHHHhChHhheEEEEEeccCCCCCCcHHHHHHHhhccCChhhHHHHHHhhccCCCCCccccccC
Confidence 589999999999999999999999999999876542100 0000000000000 000
Q ss_pred ---------CCCcHHHHHHHHhc-CcccCC-------CCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHh
Q 003878 673 ---------CSEEEEEFYWLIKY-SPLHNV-------RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 735 (789)
Q Consensus 673 ---------~p~~~~~~~~l~~~-sP~~~v-------~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~ 735 (789)
....++........ .|.... ... ........|+|+++|++|..+|+..+.++.+.+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~p~~ 228 (273)
T 1xkl_A 153 PKFLAHKLYQLCSPEDLALASSLVRPSSLFMEDLSKAKYF----TDERFGSVKRVYIVCTEDKGIPEEFQRWQIDNIGVT 228 (273)
T ss_dssp HHHHHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHCCCC----CTTTGGGSCEEEEEETTCTTTTHHHHHHHHHHHCCS
T ss_pred HHHHHHHhhccCCHHHHHHHHHhcCCCchhhhhhhccccc----chhhhCCCCeEEEEeCCccCCCHHHHHHHHHhCCCC
Confidence 00011111111111 111000 000 000012468999999999999999888877766432
Q ss_pred hccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 736 LCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
++.+++++||....... .+..+.+.+|+.+..
T Consensus 229 --------------~~~~i~~aGH~~~~e~P--~~~~~~i~~fl~~~~ 260 (273)
T 1xkl_A 229 --------------EAIEIKGADHMAMLCEP--QKLCASLLEIAHKYN 260 (273)
T ss_dssp --------------EEEEETTCCSCHHHHSH--HHHHHHHHHHHHHCC
T ss_pred --------------eEEEeCCCCCCchhcCH--HHHHHHHHHHHHHhc
Confidence 78899999998643333 356677888987653
No 198
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural mycobacterium tuberculosis structural proteomics project, X hydrolase; 2.10A {Mycobacterium tuberculosis} PDB: 2zjf_A*
Probab=99.38 E-value=6.5e-12 Score=136.44 Aligned_cols=122 Identities=12% Similarity=0.068 Sum_probs=84.9
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.+| .+|.+...-|++ ++.|.||++||..+.... |... ...|.++||.|+++|+||.|..... ....
T Consensus 10 ~~g-~~l~y~~~G~~~----~~~~~vv~~hG~~~~~~~--~~~~-~~~l~~~g~~vi~~d~~g~g~s~~~------~~~~ 75 (356)
T 2e3j_A 10 CRG-TRIHAVADSPPD----QQGPLVVLLHGFPESWYS--WRHQ-IPALAGAGYRVVAIDQRGYGRSSKY------RVQK 75 (356)
T ss_dssp ETT-EEEEEEEECCTT----CCSCEEEEECCTTCCGGG--GTTT-HHHHHHTTCEEEEECCTTSTTSCCC------CSGG
T ss_pred cCC-eEEEEEEecCCC----CCCCEEEEECCCCCcHHH--HHHH-HHHHHHcCCEEEEEcCCCCCCCCCC------Cccc
Confidence 478 888887765542 346899999998765433 3332 3445448999999999997754211 0111
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
..+++++.+.+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+..+..
T Consensus 76 ~~~~~~~~~~~~~~~~~--l~~~~~~l~G~S~Gg~~a~~~a~~~p~~v~~lvl~~~~~ 131 (356)
T 2e3j_A 76 AYRIKELVGDVVGVLDS--YGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPF 131 (356)
T ss_dssp GGSHHHHHHHHHHHHHH--TTCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESSCC
T ss_pred ccCHHHHHHHHHHHHHH--cCCCCeEEEEECHhHHHHHHHHHhCcHhhcEEEEECCcc
Confidence 23455555555555543 345689999999999999999999999999999876543
No 199
>3pic_A CIP2; alpha/beta hydrolase fold, glucuronoyl esterase, carbohydrat esterase family 15 (CE-15), N-linked glycosylation, secrete hydrolase; HET: NAG; 1.90A {Hypocrea jecorina}
Probab=99.38 E-value=2.8e-11 Score=128.28 Aligned_cols=118 Identities=13% Similarity=0.007 Sum_probs=90.2
Q ss_pred eEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEee--------cCCCCCChhHHh-cc
Q 003878 520 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANI--------RGGGEYGEEWHK-GG 590 (789)
Q Consensus 520 ~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------RG~g~~g~~~~~-~~ 590 (789)
..+++.|++|++. .++.|+||.+||+.. . +. +||+++.+|. ||+.++|. |++ .+
T Consensus 90 ~~~~~~i~lP~~~--~~p~Pvii~i~~~~~-------~------~~-~G~a~~~~~~~~v~~~~~~gs~g~g~-f~~ly~ 152 (375)
T 3pic_A 90 ISFTVTITYPSSG--TAPYPAIIGYGGGSL-------P------AP-AGVAMINFNNDNIAAQVNTGSRGQGK-FYDLYG 152 (375)
T ss_dssp EEEEEEEECCSSS--CSSEEEEEEETTCSS-------C------CC-TTCEEEEECHHHHSCCSSGGGTTCSH-HHHHHC
T ss_pred eEEEEEEECCCCC--CCCccEEEEECCCcc-------c------cC-CCeEEEEecccccccccCCCCcccee-cccccC
Confidence 6788999999874 378999999998421 0 33 8999999987 66666776 442 22
Q ss_pred c-ccCCcchH--HHHHHHHHHHHHcC--CCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccc
Q 003878 591 A-LAKKQNCF--DDFISASEYLISAG--YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDM 655 (789)
Q Consensus 591 ~-~~~~~~~~--~D~~~~~~~L~~~~--~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~ 655 (789)
. ..++.-.. -|+..+++||..+. .+|++||+|+|+|+||..++++++.. ++++++|+++|.++-
T Consensus 153 ~~~~~gal~awaWg~~raid~L~~~~~~~VD~~RIgv~G~S~gG~~al~~aA~D-~Ri~~~v~~~~g~~G 221 (375)
T 3pic_A 153 SSHSAGAMTAWAWGVSRVIDALELVPGARIDTTKIGVTGCSRNGKGAMVAGAFE-KRIVLTLPQESGAGG 221 (375)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHCGGGCEEEEEEEEEEETHHHHHHHHHHHHC-TTEEEEEEESCCTTT
T ss_pred CccchHHHHHHHHHHHHHHHHHHhCCccCcChhhEEEEEeCCccHHHHHHHhcC-CceEEEEeccCCCCc
Confidence 1 11221111 47899999999998 89999999999999999999999996 489999999876543
No 200
>3fla_A RIFR; alpha-beta hydrolase thioesterase, hydrolase; HET: MSE; 1.80A {Amycolatopsis mediterranei} PDB: 3flb_A*
Probab=99.38 E-value=2.8e-12 Score=132.17 Aligned_cols=208 Identities=13% Similarity=0.016 Sum_probs=125.6
Q ss_pred CCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCC
Q 003878 535 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 614 (789)
Q Consensus 535 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~ 614 (789)
.++.|.||++||..+.. ..|. .+...|+ .+|.|+++|+||.|... ......++++..+.+..+++.-
T Consensus 17 ~~~~~~vv~~HG~~~~~--~~~~-~~~~~l~-~~~~v~~~d~~G~G~s~--------~~~~~~~~~~~~~~~~~~l~~~- 83 (267)
T 3fla_A 17 PDARARLVCLPHAGGSA--SFFF-PLAKALA-PAVEVLAVQYPGRQDRR--------HEPPVDSIGGLTNRLLEVLRPF- 83 (267)
T ss_dssp TTCSEEEEEECCTTCCG--GGGH-HHHHHHT-TTEEEEEECCTTSGGGT--------TSCCCCSHHHHHHHHHHHTGGG-
T ss_pred CCCCceEEEeCCCCCCc--hhHH-HHHHHhc-cCcEEEEecCCCCCCCC--------CCCCCcCHHHHHHHHHHHHHhc-
Confidence 35679999999986542 2333 3455666 67999999999976421 1122345667666666666542
Q ss_pred CCCCcEEEEeeChHHHHHHHHHHhCCCc----eeEEEecCCcccccccccc--cCC-ccc---hhhcCC-C----CcH--
Q 003878 615 TQSRKLCIEGGSNGGLLVGACINQRPDL----FGCALAHVGVMDMLRYHKF--TIG-HAW---VSDFGC-S----EEE-- 677 (789)
Q Consensus 615 ~d~~~i~i~G~S~GG~l~~~~~~~~pd~----f~a~v~~~p~~d~~~~~~~--~~~-~~~---~~e~g~-p----~~~-- 677 (789)
..+++.++|+|+||.+++.++.++|++ ++++|+..+.......... ... ..+ ...++. + .++
T Consensus 84 -~~~~~~lvG~S~Gg~ia~~~a~~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (267)
T 3fla_A 84 -GDRPLALFGHSMGAIIGYELALRMPEAGLPAPVHLFASGRRAPSRYRDDDVRGASDERLVAELRKLGGSDAAMLADPEL 162 (267)
T ss_dssp -TTSCEEEEEETHHHHHHHHHHHHTTTTTCCCCSEEEEESCCCTTCCCCSCTTCCCHHHHHHHHHHTCHHHHHHHHSHHH
T ss_pred -CCCceEEEEeChhHHHHHHHHHhhhhhccccccEEEECCCCccccccchhhcccchHHHHHHHHHhcCcchhhccCHHH
Confidence 457899999999999999999999986 7888877654322111000 000 000 001110 0 011
Q ss_pred ---------HHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCc
Q 003878 678 ---------EEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNP 748 (789)
Q Consensus 678 ---------~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 748 (789)
..+..+..+.+... .. ...|+|+++|++|..+++..+.++.+.+ ..+
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~-~~----------~~~P~l~i~g~~D~~~~~~~~~~~~~~~-------------~~~ 218 (267)
T 3fla_A 163 LAMVLPAIRSDYRAVETYRHEPG-RR----------VDCPVTVFTGDHDPRVSVGEARAWEEHT-------------TGP 218 (267)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCTT-CC----------BSSCEEEEEETTCTTCCHHHHHGGGGGB-------------SSC
T ss_pred HHHHHHHHHHHHHhhhccccccc-Cc----------CCCCEEEEecCCCCCCCHHHHHHHHHhc-------------CCC
Confidence 11222333333222 23 2679999999999999987766654432 335
Q ss_pred EEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 749 IIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 749 ~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
+++.++++ ||...... ..+....+.+||.+..
T Consensus 219 ~~~~~~~g-gH~~~~~~--~~~~~~~i~~fl~~~~ 250 (267)
T 3fla_A 219 ADLRVLPG-GHFFLVDQ--AAPMIATMTEKLAGPA 250 (267)
T ss_dssp EEEEEESS-STTHHHHT--HHHHHHHHHHHTC---
T ss_pred ceEEEecC-CceeeccC--HHHHHHHHHHHhcccc
Confidence 78999998 99864322 2355666777876543
No 201
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.38 E-value=5.3e-10 Score=122.15 Aligned_cols=256 Identities=11% Similarity=0.064 Sum_probs=164.3
Q ss_pred EEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeec----
Q 003878 158 ATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVS---- 233 (789)
Q Consensus 158 ~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~---- 233 (789)
.+|++||+++++.+.. +... .. ..+..+.|+++ .+++++..++...+|....
T Consensus 12 ~~v~v~d~~~~~~~~~-~~~~-------~~-----~~~~~~s~dg~-----------~l~~~~~~d~~i~v~d~~~~~~~ 67 (391)
T 1l0q_A 12 DNISVIDVTSNKVTAT-IPVG-------SN-----PMGAVISPDGT-----------KVYVANAHSNDVSIIDTATNNVI 67 (391)
T ss_dssp TEEEEEETTTTEEEEE-EECS-------SS-----EEEEEECTTSS-----------EEEEEEGGGTEEEEEETTTTEEE
T ss_pred CEEEEEECCCCeEEEE-eecC-------CC-----cceEEECCCCC-----------EEEEECCCCCeEEEEECCCCeEE
Confidence 3799999999976531 1111 00 12334456764 3445555778888887543
Q ss_pred -----ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEe
Q 003878 234 -----QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVT 308 (789)
Q Consensus 234 -----~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~S 308 (789)
......++|+|||+.|+++... ...|+++++.+... +..+.... ....+.|+
T Consensus 68 ~~~~~~~~v~~~~~spdg~~l~~~~~~------------------~~~v~v~d~~~~~~--~~~~~~~~---~~~~~~~s 124 (391)
T 1l0q_A 68 ATVPAGSSPQGVAVSPDGKQVYVTNMA------------------SSTLSVIDTTSNTV--AGTVKTGK---SPLGLALS 124 (391)
T ss_dssp EEEECSSSEEEEEECTTSSEEEEEETT------------------TTEEEEEETTTTEE--EEEEECSS---SEEEEEEC
T ss_pred EEEECCCCccceEECCCCCEEEEEECC------------------CCEEEEEECCCCeE--EEEEeCCC---CcceEEEC
Confidence 2234678999999999887432 24689999876532 22333222 24678999
Q ss_pred cCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEE
Q 003878 309 EDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIR 388 (789)
Q Consensus 309 pDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~ 388 (789)
|||++|++.... ...|+++|+.++. ....+..+.......|+|+|+.+++.... +..|+.
T Consensus 125 ~dg~~l~~~~~~----~~~v~~~d~~~~~-------------~~~~~~~~~~~~~~~~~~dg~~l~~~~~~---~~~v~~ 184 (391)
T 1l0q_A 125 PDGKKLYVTNNG----DKTVSVINTVTKA-------------VINTVSVGRSPKGIAVTPDGTKVYVANFD---SMSISV 184 (391)
T ss_dssp TTSSEEEEEETT----TTEEEEEETTTTE-------------EEEEEECCSSEEEEEECTTSSEEEEEETT---TTEEEE
T ss_pred CCCCEEEEEeCC----CCEEEEEECCCCc-------------EEEEEecCCCcceEEECCCCCEEEEEeCC---CCEEEE
Confidence 999999776532 3579999998742 11222222222234589999988776543 367999
Q ss_pred EECCCCCCeEEeccCCCCceeeeEEEecCCE-EEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEE
Q 003878 389 VDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFI 467 (789)
Q Consensus 389 ~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~ 467 (789)
+|+.+++ ....++.. ..+..+.+++++. +++.........|++||+.+++.+..+..+. .+..+.++++++.+++
T Consensus 185 ~d~~~~~-~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~ 260 (391)
T 1l0q_A 185 IDTVTNS-VIDTVKVE--AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDGKKVYV 260 (391)
T ss_dssp EETTTTE-EEEEEECS--SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTSSEEEE
T ss_pred EECCCCe-EEEEEecC--CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-CccEEEEccCCCEEEE
Confidence 9998875 33344433 4567788887654 4444432233589999999887655555443 3556788999998877
Q ss_pred EEcCCCCCcEEEEEECCCCC
Q 003878 468 SFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 468 ~~ss~~~P~~ly~~dl~tg~ 487 (789)
+.+ .-..++.||+.+++
T Consensus 261 s~~---~d~~v~v~d~~~~~ 277 (391)
T 1l0q_A 261 ALS---FXNTVSVIDTATNT 277 (391)
T ss_dssp EET---TTTEEEEEETTTTE
T ss_pred EcC---CCCEEEEEECCCCc
Confidence 653 23789999999885
No 202
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=99.38 E-value=2.5e-12 Score=139.11 Aligned_cols=114 Identities=11% Similarity=0.053 Sum_probs=77.8
Q ss_pred CCccEEEEEcCCCCccCC---CCCC----------HHHHHHHHcCCeEEEEEeecCCCCCChhHHh-cccc-cCC-cchH
Q 003878 536 GSHPCLLYGYGGFNISVT---PSFS----------VSRTILMRHLGAVFCIANIRGGGEYGEEWHK-GGAL-AKK-QNCF 599 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~---~~~~----------~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~-~~~~-~~~-~~~~ 599 (789)
++.|+||++||..+.... ..|. ......|.++||.|+++|+||.|.....-.. .+.. ... ....
T Consensus 48 ~~~~~vv~~hG~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~l~~~g~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~ 127 (354)
T 2rau_A 48 GGNDAVLILPGTWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFTANWGWSTWI 127 (354)
T ss_dssp CCEEEEEEECCTTCCHHHHHHSEETTEECSCCCGGGCHHHHHHHTTEEEEEEECGGGGCCTTCCGGGGGGGTTCSHHHHH
T ss_pred CCCCEEEEECCCCCCccccccccccccccccccchhhHHHHHHhCCCEEEEecCCCCCCCCcccccccccccCCcHHHHH
Confidence 456899999998766431 0111 1234555558999999999997754321100 0000 111 2224
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCceeEEEecCC
Q 003878 600 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVG 651 (789)
Q Consensus 600 ~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-pd~f~a~v~~~p 651 (789)
+|+.+++++|.++ .+.++++++|+|+||.+++.++.++ |++++++|+..+
T Consensus 128 ~d~~~~~~~l~~~--~~~~~~~l~G~S~Gg~~a~~~a~~~~p~~v~~lvl~~~ 178 (354)
T 2rau_A 128 SDIKEVVSFIKRD--SGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDG 178 (354)
T ss_dssp HHHHHHHHHHHHH--HCCSSEEEEEETHHHHHHHHHHHHHHHHHEEEEEEESC
T ss_pred HHHHHHHHHHHHh--cCCceEEEEEECHhHHHHHHHHHhcCccccceEEEecc
Confidence 7888888888765 3457899999999999999999998 999999998844
No 203
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=99.37 E-value=6.2e-12 Score=135.64 Aligned_cols=104 Identities=14% Similarity=0.134 Sum_probs=75.5
Q ss_pred CccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEee----cCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHc
Q 003878 537 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANI----RGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA 612 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~----RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~ 612 (789)
..|+||++||..+......+.......|. +||.|+.+|+ ||.|.... ....+|+.+.+++|.+.
T Consensus 37 ~~~~vvllHG~~~~~~~~~~~~~l~~~L~-~g~~Vi~~Dl~~D~~G~G~S~~-----------~~~~~d~~~~~~~l~~~ 104 (335)
T 2q0x_A 37 ARRCVLWVGGQTESLLSFDYFTNLAEELQ-GDWAFVQVEVPSGKIGSGPQDH-----------AHDAEDVDDLIGILLRD 104 (335)
T ss_dssp SSSEEEEECCTTCCTTCSTTHHHHHHHHT-TTCEEEEECCGGGBTTSCSCCH-----------HHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCCCccccchhHHHHHHHHHH-CCcEEEEEeccCCCCCCCCccc-----------cCcHHHHHHHHHHHHHH
Confidence 45789999996544333333223445565 8999999954 77664321 12357888888888874
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHH--hCCCceeEEEecCCccc
Q 003878 613 GYTQSRKLCIEGGSNGGLLVGACIN--QRPDLFGCALAHVGVMD 654 (789)
Q Consensus 613 ~~~d~~~i~i~G~S~GG~l~~~~~~--~~pd~f~a~v~~~p~~d 654 (789)
.+.+++.++|||+||.+++.++. .+|++++++|+..|+.+
T Consensus 105 --l~~~~~~LvGhSmGG~iAl~~A~~~~~p~rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 105 --HCMNEVALFATSTGTQLVFELLENSAHKSSITRVILHGVVCD 146 (335)
T ss_dssp --SCCCCEEEEEEGGGHHHHHHHHHHCTTGGGEEEEEEEEECCC
T ss_pred --cCCCcEEEEEECHhHHHHHHHHHhccchhceeEEEEECCccc
Confidence 34579999999999999999988 47999999999887654
No 204
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=99.37 E-value=5.1e-12 Score=132.58 Aligned_cols=114 Identities=9% Similarity=-0.045 Sum_probs=83.2
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.+| .+|.+...- +.|.||++||..+.... |... ...|.++ |.|+++|.||.|..... ..
T Consensus 17 ~~g-~~l~~~~~g--------~~~~vv~lHG~~~~~~~--~~~~-~~~L~~~-~~vi~~D~~G~G~S~~~--------~~ 75 (301)
T 3kda_A 17 VDG-VKLHYVKGG--------QGPLVMLVHGFGQTWYE--WHQL-MPELAKR-FTVIAPDLPGLGQSEPP--------KT 75 (301)
T ss_dssp ETT-EEEEEEEEE--------SSSEEEEECCTTCCGGG--GTTT-HHHHTTT-SEEEEECCTTSTTCCCC--------SS
T ss_pred eCC-eEEEEEEcC--------CCCEEEEECCCCcchhH--HHHH-HHHHHhc-CeEEEEcCCCCCCCCCC--------CC
Confidence 488 888765442 45799999998766543 3332 3456635 99999999998764322 22
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCc-EEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 596 QNCFDDFISASEYLISAGYTQSRK-LCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~-i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
..+++|+.+.+..+++. ...++ +.++|||+||.+++.++.++|++++++|+..|.
T Consensus 76 ~~~~~~~~~~l~~~l~~--l~~~~p~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 131 (301)
T 3kda_A 76 GYSGEQVAVYLHKLARQ--FSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAP 131 (301)
T ss_dssp CSSHHHHHHHHHHHHHH--HCSSSCEEEEEETHHHHTTHHHHHHCGGGEEEEEEESSC
T ss_pred CccHHHHHHHHHHHHHH--cCCCccEEEEEeCccHHHHHHHHHhChhhccEEEEEccC
Confidence 34566666666665554 23456 999999999999999999999999999998875
No 205
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=99.37 E-value=3.4e-12 Score=134.61 Aligned_cols=208 Identities=15% Similarity=0.045 Sum_probs=123.0
Q ss_pred CCccEEEEEcCC-CCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCC
Q 003878 536 GSHPCLLYGYGG-FNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 614 (789)
Q Consensus 536 ~~~P~ll~~hGg-~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~ 614 (789)
++.|.||++||. ++......|... ...|. ..|.|+++|.||.|..... .....+++++.+.+..+++.
T Consensus 34 g~~~~vvllHG~~pg~~~~~~w~~~-~~~L~-~~~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~-- 102 (291)
T 2wue_A 34 GNDQTVVLLHGGGPGAASWTNFSRN-IAVLA-RHFHVLAVDQPGYGHSDKR-------AEHGQFNRYAAMALKGLFDQ-- 102 (291)
T ss_dssp TCSSEEEEECCCCTTCCHHHHTTTT-HHHHT-TTSEEEEECCTTSTTSCCC-------SCCSSHHHHHHHHHHHHHHH--
T ss_pred CCCCcEEEECCCCCccchHHHHHHH-HHHHH-hcCEEEEECCCCCCCCCCC-------CCCCcCHHHHHHHHHHHHHH--
Confidence 344689999997 332222234332 34555 4699999999998764321 11134566666666655554
Q ss_pred CCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccccccc-c-----------cc--cCC----ccchhhc-CCC-
Q 003878 615 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRY-H-----------KF--TIG----HAWVSDF-GCS- 674 (789)
Q Consensus 615 ~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~~-~-----------~~--~~~----~~~~~e~-g~p- 674 (789)
...+++.++|||+||.+++.++.++|++++++|+..|....... . .. ... ..+...+ ..+
T Consensus 103 l~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (291)
T 2wue_A 103 LGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGPGGLSINLFAPDPTEGVKRLSKFSVAPTRENLEAFLRVMVYDKN 182 (291)
T ss_dssp HTCCSEEEEEETHHHHHHHHHHHHSTTTEEEEEEESCSSSCCCSSSCSSCHHHHHHHHHHHSCCHHHHHHHHHTSCSSGG
T ss_pred hCCCCeEEEEEChhHHHHHHHHHhChHhhcEEEEECCCCCCccccccccchhhHHHHHHhccCCHHHHHHHHHHhccCcc
Confidence 22368999999999999999999999999999998775421100 0 00 000 0000000 111
Q ss_pred -C-------------cHHHHHHHHh----cC------cc--cCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHH
Q 003878 675 -E-------------EEEEFYWLIK----YS------PL--HNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKL 728 (789)
Q Consensus 675 -~-------------~~~~~~~l~~----~s------P~--~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~ 728 (789)
. +++.+..+.. +. +. ..+.++ ..|+|+++|++|..+|+..+.++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~P~lvi~G~~D~~~~~~~~~~~ 252 (291)
T 2wue_A 183 LITPELVDQRFALASTPESLTATRAMGKSFAGADFEAGMMWREVYRL----------RQPVLLIWGREDRVNPLDGALVA 252 (291)
T ss_dssp GSCHHHHHHHHHHHTSHHHHHHHHHHHHHHTSTTGGGGCGGGTGGGC----------CSCEEEEEETTCSSSCGGGGHHH
T ss_pred cCCHHHHHHHHHHhcCchHHHHHHHHHhhccccccccchhHHHHhhC----------CCCeEEEecCCCCCCCHHHHHHH
Confidence 0 1111111111 00 00 122232 68999999999999999888777
Q ss_pred HHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 729 LATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 729 ~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
.+.+.. .++.+++++||....... .+..+.+.+||.
T Consensus 253 ~~~~p~--------------~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~ 288 (291)
T 2wue_A 253 LKTIPR--------------AQLHVFGQCGHWVQVEKF--DEFNKLTIEFLG 288 (291)
T ss_dssp HHHSTT--------------EEEEEESSCCSCHHHHTH--HHHHHHHHHHTT
T ss_pred HHHCCC--------------CeEEEeCCCCCChhhhCH--HHHHHHHHHHHh
Confidence 655432 478999999998643222 345556677764
No 206
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A {Escherichia coli} PDB: 3bf8_A
Probab=99.36 E-value=4.5e-12 Score=130.59 Aligned_cols=204 Identities=16% Similarity=0.055 Sum_probs=119.1
Q ss_pred CccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCC
Q 003878 537 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 616 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d 616 (789)
..|.||++||..+... .|.. ....|. ..|.|+++|.||.|..... ...+++++.+.+..+++. ..
T Consensus 15 ~~~~vvllHG~~~~~~--~w~~-~~~~L~-~~~~via~Dl~G~G~S~~~---------~~~~~~~~a~dl~~~l~~--l~ 79 (255)
T 3bf7_A 15 NNSPIVLVHGLFGSLD--NLGV-LARDLV-NDHNIIQVDVRNHGLSPRE---------PVMNYPAMAQDLVDTLDA--LQ 79 (255)
T ss_dssp CCCCEEEECCTTCCTT--TTHH-HHHHHT-TTSCEEEECCTTSTTSCCC---------SCCCHHHHHHHHHHHHHH--HT
T ss_pred CCCCEEEEcCCcccHh--HHHH-HHHHHH-hhCcEEEecCCCCCCCCCC---------CCcCHHHHHHHHHHHHHH--cC
Confidence 4578999999876543 4544 345566 4599999999998764321 123455554444444433 12
Q ss_pred CCcEEEEeeChHHHHHHHHHHhCCCceeEEEecC--Ccccccc-c------c---cc-cCCc-cchhh-cCC-CCcHHHH
Q 003878 617 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHV--GVMDMLR-Y------H---KF-TIGH-AWVSD-FGC-SEEEEEF 680 (789)
Q Consensus 617 ~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~--p~~d~~~-~------~---~~-~~~~-~~~~e-~g~-p~~~~~~ 680 (789)
.+++.++|||+||.+++.++.++|++++++|+.. |...... . . .. .... ....+ +.. ..++...
T Consensus 80 ~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (255)
T 3bf7_A 80 IDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQTRQQAAAIMRQHLNEEGVI 159 (255)
T ss_dssp CSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSSCCCSCCCHHHHHHHHHHHHSCCCSHHHHHHHHTTTCCCHHHH
T ss_pred CCCeeEEeeCccHHHHHHHHHhCcHhhccEEEEcCCcccCCcccHHHHHHHHHhccccccccHHHHHHHHhhhcchhHHH
Confidence 3589999999999999999999999999998753 3211100 0 0 00 0000 00000 000 0011111
Q ss_pred HHHHh--------------------cCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCC
Q 003878 681 YWLIK--------------------YSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSL 740 (789)
Q Consensus 681 ~~l~~--------------------~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~ 740 (789)
.++.. ......+.++ ..|+|+++|++|..+++..+.++.+.+.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~P~l~i~G~~D~~~~~~~~~~~~~~~~------- 222 (255)
T 3bf7_A 160 QFLLKSFVDGEWRFNVPVLWDQYPHIVGWEKIPAW----------DHPALFIPGGNSPYVSEQYRDDLLAQFP------- 222 (255)
T ss_dssp HHHHTTEETTEESSCHHHHHHTHHHHHCCCCCCCC----------CSCEEEECBTTCSTTCGGGHHHHHHHCT-------
T ss_pred HHHHHhccCCceeecHHHHHhhhhhcccccccccc----------CCCeEEEECCCCCCCCHHHHHHHHHHCC-------
Confidence 11110 0000112232 6899999999999999888766654432
Q ss_pred CCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 741 ENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 741 ~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
..++.+++++||....... ....+.+.+|+.+
T Consensus 223 -------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~ 254 (255)
T 3bf7_A 223 -------QARAHVIAGAGHWVHAEKP--DAVLRAIRRYLND 254 (255)
T ss_dssp -------TEEECCBTTCCSCHHHHCH--HHHHHHHHHHHHT
T ss_pred -------CCeEEEeCCCCCccccCCH--HHHHHHHHHHHhc
Confidence 2588999999998643322 3456677888864
No 207
>2d81_A PHB depolymerase; alpha/beta hydrolase fold, circular permutation, hydrolase; HET: NAG RB3; 1.66A {Penicillium funiculosum} SCOP: c.69.1.37 PDB: 2d80_A*
Probab=99.36 E-value=1.4e-12 Score=138.55 Aligned_cols=149 Identities=12% Similarity=0.002 Sum_probs=99.2
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHHhCCCcee-EEEecCCc--ccccccccccCCccchhhcCCCCcHHHHHHHHhcCcc
Q 003878 613 GYTQSRKLCIEGGSNGGLLVGACINQRPDLFG-CALAHVGV--MDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPL 689 (789)
Q Consensus 613 ~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~-a~v~~~p~--~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~ 689 (789)
..+|++||+|+|+|+||+|++.++..+|++|+ ++++.++. ........ ...+...++.+..++.......-+|+
T Consensus 6 ~~iD~~RI~v~G~S~GG~mA~~~a~~~p~~fa~g~~v~ag~p~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~i 82 (318)
T 2d81_A 6 FNVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGPYDCARNQYY---TSCMYNGYPSITTPTANMKSWSGNQI 82 (318)
T ss_dssp CCEEEEEEEEEEETHHHHHHHHHHHHTTTTSCSEEEEESCCCTTTTSSSCG---GGGSTTCCCCCHHHHHHHHHHBTTTB
T ss_pred cCcCcceEEEEEECHHHHHHHHHHHHCchhhhccceEEecccccccchHHH---HHHhhccCCCCCCHHHHHHHhhcccC
Confidence 34799999999999999999999999999998 76655442 11111000 00000001112122222111111455
Q ss_pred cCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCC--CcEEEEEeCCCCcCCCCchh-
Q 003878 690 HNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQT--NPIIGRIERKAGHGVGLPTQ- 766 (789)
Q Consensus 690 ~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~--~~~~l~~~~~~gH~~~~~~~- 766 (789)
..+..+ ..+|+||+||++|.+||+.++.+++++|++. + .++++++++++||++.....
T Consensus 83 ~~~~~l---------~~~Pvli~HG~~D~vVP~~~s~~~~~~L~~~----------g~~~~ve~~~~~g~gH~~~~~~~~ 143 (318)
T 2d81_A 83 ASVANL---------GQRKIYMWTGSSDTTVGPNVMNQLKAQLGNF----------DNSANVSYVTTTGAVHTFPTDFNG 143 (318)
T ss_dssp CCGGGG---------GGCEEEEEEETTCCSSCHHHHHHHHHHHTTT----------SCGGGEEEEEETTCCSSEEESSCC
T ss_pred ChhHcC---------CCCcEEEEeCCCCCCcCHHHHHHHHHHHHhc----------CCCcceEEEEeCCCCCCCccCCcc
Confidence 554443 3579999999999999999999999999976 5 37999999999998543221
Q ss_pred ----------------hHHHHHHHHHHHHHHHh
Q 003878 767 ----------------KMIDEAADRYGFMAKML 783 (789)
Q Consensus 767 ----------------~~~~~~~~~~~fl~~~l 783 (789)
-.++....+++||...+
T Consensus 144 ~~~~~c~~~~~pyi~~~~~d~~~~i~~ff~g~~ 176 (318)
T 2d81_A 144 AGDNSCSLSTSPYISNCNYDGAGAALKWIYGSL 176 (318)
T ss_dssp TTCCCTTSCCTTCEEECSSCHHHHHHHHHHSSC
T ss_pred cCccccccCCCCcccCCCChHHHHHHHHHhccC
Confidence 02567788999997655
No 208
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta hydrolase, signaling protein; 2.50A {Bacillus subtilis} PDB: 1wpr_A*
Probab=99.36 E-value=3.7e-12 Score=132.55 Aligned_cols=210 Identities=11% Similarity=0.066 Sum_probs=124.6
Q ss_pred ccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 003878 538 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 617 (789)
Q Consensus 538 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~ 617 (789)
.|.||++||..+.... |.. ....|. .+|.|+++|.||.|.....-. ......+++++.+-+..+++. .+.
T Consensus 20 ~~~vvllHG~~~~~~~--w~~-~~~~L~-~~~~vi~~Dl~G~G~S~~~~~----~~~~~~~~~~~a~dl~~~l~~--l~~ 89 (271)
T 1wom_A 20 KASIMFAPGFGCDQSV--WNA-VAPAFE-EDHRVILFDYVGSGHSDLRAY----DLNRYQTLDGYAQDVLDVCEA--LDL 89 (271)
T ss_dssp SSEEEEECCTTCCGGG--GTT-TGGGGT-TTSEEEECCCSCCSSSCCTTC----CTTGGGSHHHHHHHHHHHHHH--TTC
T ss_pred CCcEEEEcCCCCchhh--HHH-HHHHHH-hcCeEEEECCCCCCCCCCCcc----cccccccHHHHHHHHHHHHHH--cCC
Confidence 3789999997655433 332 234466 589999999999886432100 001123455555555555543 234
Q ss_pred CcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccccc----cc-ccc-------------CCccchh-----hcCCC
Q 003878 618 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLR----YH-KFT-------------IGHAWVS-----DFGCS 674 (789)
Q Consensus 618 ~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~~~----~~-~~~-------------~~~~~~~-----e~g~p 674 (789)
+++.++|||+||.+++.++.++|++++++|+..|...... +. .+. ....|.. .++.+
T Consensus 90 ~~~~lvGhS~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (271)
T 1wom_A 90 KETVFVGHSVGALIGMLASIRRPELFSHLVMVGPSPCYLNDPPEYYGGFEEEQLLGLLEMMEKNYIGWATVFAATVLNQP 169 (271)
T ss_dssp SCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCSCCBEETTTEECSBCHHHHHHHHHHHHHCHHHHHHHHHHHHHCCT
T ss_pred CCeEEEEeCHHHHHHHHHHHhCHHhhcceEEEcCCCcCCCCCchhccCCCHHHHHHHHHHHhhhHHHHHHHHHHHHhcCC
Confidence 6899999999999999999999999999998876421110 00 000 0001110 01222
Q ss_pred CcHHHHHH----HHhcCc---------------ccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHh
Q 003878 675 EEEEEFYW----LIKYSP---------------LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 735 (789)
Q Consensus 675 ~~~~~~~~----l~~~sP---------------~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~ 735 (789)
..++..+. +....| ...+.++ ..|+|+++|++|..+|+..+.++.+.+.
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i----------~~P~lvi~G~~D~~~~~~~~~~~~~~~~-- 237 (271)
T 1wom_A 170 DRPEIKEELESRFCSTDPVIARQFAKAAFFSDHREDLSKV----------TVPSLILQCADDIIAPATVGKYMHQHLP-- 237 (271)
T ss_dssp TCHHHHHHHHHHHHHSCHHHHHHHHHHHHSCCCHHHHTTC----------CSCEEEEEEETCSSSCHHHHHHHHHHSS--
T ss_pred CchHHHHHHHHHHhcCCcHHHHHHHHHHhCcchHHhcccc----------CCCEEEEEcCCCCcCCHHHHHHHHHHCC--
Confidence 22211111 111111 1122333 6799999999999999887776665443
Q ss_pred hccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 736 LCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
..++.+++++||....... .+..+.+.+||.+++
T Consensus 238 ------------~~~~~~i~~~gH~~~~e~p--~~~~~~i~~fl~~~~ 271 (271)
T 1wom_A 238 ------------YSSLKQMEARGHCPHMSHP--DETIQLIGDYLKAHV 271 (271)
T ss_dssp ------------SEEEEEEEEESSCHHHHCH--HHHHHHHHHHHHHHC
T ss_pred ------------CCEEEEeCCCCcCccccCH--HHHHHHHHHHHHhcC
Confidence 2578899999998643222 355677888987753
No 209
>1ukc_A ESTA, esterase; fungi, A/B hydrolase fold, acetylcholinesterase, H; HET: NAG MAN; 2.10A {Aspergillus niger} SCOP: c.69.1.17
Probab=99.36 E-value=8.8e-13 Score=150.38 Aligned_cols=233 Identities=15% Similarity=0.114 Sum_probs=142.0
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccC-CCCCCHHHHHHHHcCCeEEEEEeecCCC-CCChhHHhcccc
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISV-TPSFSVSRTILMRHLGAVFCIANIRGGG-EYGEEWHKGGAL 592 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~-~~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~g~~~~~~~~~ 592 (789)
+.|. +.+.++.|++...+++.|+||++|||..... ...+...........|++|+.+|||.+. +|+..-.... .
T Consensus 82 ~edc---l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~~~~~~~~g~vvv~~nYRlg~~Gf~~~~~~~~-~ 157 (522)
T 1ukc_A 82 SEDC---LFINVFKPSTATSQSKLPVWLFIQGGGYAENSNANYNGTQVIQASDDVIVFVTFNYRVGALGFLASEKVRQ-N 157 (522)
T ss_dssp ESCC---CEEEEEEETTCCTTCCEEEEEEECCSTTTSCCSCSCCCHHHHHHTTSCCEEEEECCCCHHHHHCCCHHHHH-S
T ss_pred CCcC---CEEEEEECCCCCCCCCCCEEEEECCCccccCCccccCcHHHHHhcCCcEEEEEecccccccccccchhccc-c
Confidence 4566 5566778876544567899999999954433 2344443222222469999999999543 3332111110 0
Q ss_pred cCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC----CCceeEEEecCCccccccccccc--C
Q 003878 593 AKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR----PDLFGCALAHVGVMDMLRYHKFT--I 663 (789)
Q Consensus 593 ~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~----pd~f~a~v~~~p~~d~~~~~~~~--~ 663 (789)
......+.|.+++++|+.++- ..||+||.|+|+|+||.+++.++... +.+|+++|+++|........... .
T Consensus 158 ~~~n~gl~D~~~al~wv~~ni~~fggDp~~v~i~G~SaGg~~v~~~l~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~~~~ 237 (522)
T 1ukc_A 158 GDLNAGLLDQRKALRWVKQYIEQFGGDPDHIVIHGVSAGAGSVAYHLSAYGGKDEGLFIGAIVESSFWPTQRTVSEMEFQ 237 (522)
T ss_dssp SCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTGGGTCCCSSCSEEEEESCCCCCCCCSGGGHHH
T ss_pred CCCChhHHHHHHHHHHHHHHHHHcCCCchhEEEEEEChHHHHHHHHHhCCCccccccchhhhhcCCCcCCcCCHHHHHHH
Confidence 123456899999999998762 35999999999999999888777653 57999999999976532221100 0
Q ss_pred CccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCe--EEEEecCCCCCCCcHHHHHHHHHHHHhhccCCC
Q 003878 664 GHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPS--TLLLTADHDDRVVPLHSLKLLATMQYVLCTSLE 741 (789)
Q Consensus 664 ~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp--~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~ 741 (789)
........|++...+..+.|++.++...+... ..........+| ++..+..-|..+.+.++.++.++.+..
T Consensus 238 ~~~~~~~~gc~~~~~~~~~Lr~~~~~~l~~a~-~~~~~~~~~~~~~~~~~f~Pv~D~~~l~~~p~~~~~~g~~~------ 310 (522)
T 1ukc_A 238 FERFVNDTGCSSARDSLECLREQDIATIQKGN-TGSPFPGGSSSPLPDWYFLPVTDGSLVPDELYNAFDAGNFI------ 310 (522)
T ss_dssp HHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHS-SCCCCTTCCSSSCCSCCSCCCCCSSSSCSCHHHHHHHTCSC------
T ss_pred HHHHHHHcCCCCHHHHHHHHHcCCHHHHHHHH-HhccccccccCcccccccccccCCcccCCCHHHHHhcCCCC------
Confidence 00112234655333345556654432211100 000000001223 455666778888888888877665444
Q ss_pred CCCCCCcEEEEEeCCCCcCCC
Q 003878 742 NSPQTNPIIGRIERKAGHGVG 762 (789)
Q Consensus 742 ~~~~~~~~~l~~~~~~gH~~~ 762 (789)
++|+.+-...++||.+.
T Consensus 311 ----~vp~l~G~~~~Eg~~f~ 327 (522)
T 1ukc_A 311 ----KVPVLVGDDTDEGSNFA 327 (522)
T ss_dssp ----CCCEEEEEETBGGGGTS
T ss_pred ----CCCEEEEeecchhHHhh
Confidence 78999999999999875
No 210
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=99.36 E-value=1.4e-11 Score=131.71 Aligned_cols=120 Identities=15% Similarity=0.148 Sum_probs=79.3
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccC
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAK 594 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~ 594 (789)
..+| .+|.+... ++.|.||++||.++... .|... ...|.++||.|+++|.||.|.....- ....
T Consensus 17 ~~~g-~~l~y~~~--------G~g~~vvllHG~~~~~~--~w~~~-~~~L~~~g~~via~Dl~G~G~S~~~~----~~~~ 80 (328)
T 2cjp_A 17 AVNG-LNMHLAEL--------GEGPTILFIHGFPELWY--SWRHQ-MVYLAERGYRAVAPDLRGYGDTTGAP----LNDP 80 (328)
T ss_dssp EETT-EEEEEEEE--------CSSSEEEEECCTTCCGG--GGHHH-HHHHHTTTCEEEEECCTTSTTCBCCC----TTCG
T ss_pred cCCC-cEEEEEEc--------CCCCEEEEECCCCCchH--HHHHH-HHHHHHCCcEEEEECCCCCCCCCCcC----cCCc
Confidence 3478 77766543 13478999999876532 34433 34555589999999999987642110 0011
Q ss_pred CcchHHHHHHHHHHHHHc-CCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCC
Q 003878 595 KQNCFDDFISASEYLISA-GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 651 (789)
Q Consensus 595 ~~~~~~D~~~~~~~L~~~-~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p 651 (789)
...+++++.+-+..+++. +. +.+++.++|||+||.+++.++.++|++++++|+..+
T Consensus 81 ~~~~~~~~a~dl~~~l~~l~~-~~~~~~lvGhS~Gg~ia~~~A~~~p~~v~~lvl~~~ 137 (328)
T 2cjp_A 81 SKFSILHLVGDVVALLEAIAP-NEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSV 137 (328)
T ss_dssp GGGSHHHHHHHHHHHHHHHCT-TCSSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred ccccHHHHHHHHHHHHHHhcC-CCCCeEEEEECHHHHHHHHHHHhChhheeEEEEEcc
Confidence 123444444444444433 21 246899999999999999999999999999998654
No 211
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=99.36 E-value=4.1e-12 Score=123.65 Aligned_cols=169 Identities=12% Similarity=-0.057 Sum_probs=116.0
Q ss_pred ccEEEEEcCCCCccCCCCCCHHHHHHHHcCCe---EEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCC
Q 003878 538 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGA---VFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 614 (789)
Q Consensus 538 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~ 614 (789)
.|.||++||..+... .|.. +...|.++|| .|+.+|+||.|.... ..++++.+.++.+++.
T Consensus 3 ~~~vv~~HG~~~~~~--~~~~-~~~~l~~~G~~~~~v~~~d~~g~g~s~~------------~~~~~~~~~~~~~~~~-- 65 (181)
T 1isp_A 3 HNPVVMVHGIGGASF--NFAG-IKSYLVSQGWSRDKLYAVDFWDKTGTNY------------NNGPVLSRFVQKVLDE-- 65 (181)
T ss_dssp CCCEEEECCTTCCGG--GGHH-HHHHHHHTTCCGGGEEECCCSCTTCCHH------------HHHHHHHHHHHHHHHH--
T ss_pred CCeEEEECCcCCCHh--HHHH-HHHHHHHcCCCCccEEEEecCCCCCchh------------hhHHHHHHHHHHHHHH--
Confidence 478999999876533 3443 4455666898 599999998764321 2456666666666654
Q ss_pred CCCCcEEEEeeChHHHHHHHHHHhC--CCceeEEEecCCcccccccccccCCccchhhcCCCCcHHHHHHHHhcCcccCC
Q 003878 615 TQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNV 692 (789)
Q Consensus 615 ~d~~~i~i~G~S~GG~l~~~~~~~~--pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v 692 (789)
.+.+++.++|||+||.++..++.++ |++++++|+..|......... .+. .
T Consensus 66 ~~~~~~~lvG~S~Gg~~a~~~~~~~~~~~~v~~~v~~~~~~~~~~~~~------------~~~----------------~ 117 (181)
T 1isp_A 66 TGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKA------------LPG----------------T 117 (181)
T ss_dssp HCCSCEEEEEETHHHHHHHHHHHHSSGGGTEEEEEEESCCGGGTCSBC------------CCC----------------S
T ss_pred cCCCeEEEEEECccHHHHHHHHHhcCCCceEEEEEEEcCccccccccc------------CCC----------------C
Confidence 2456899999999999999999988 899999999988754321100 000 0
Q ss_pred CCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHH
Q 003878 693 RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEA 772 (789)
Q Consensus 693 ~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~ 772 (789)
... ...|+|+++|++|..||+..+. + ...++.+++++||....... +..
T Consensus 118 ~~~---------~~~p~l~i~G~~D~~v~~~~~~-----~--------------~~~~~~~~~~~gH~~~~~~~---~~~ 166 (181)
T 1isp_A 118 DPN---------QKILYTSIYSSADMIVMNYLSR-----L--------------DGARNVQIHGVGHIGLLYSS---QVN 166 (181)
T ss_dssp CTT---------CCCEEEEEEETTCSSSCHHHHC-----C--------------BTSEEEEESSCCTGGGGGCH---HHH
T ss_pred CCc---------cCCcEEEEecCCCccccccccc-----C--------------CCCcceeeccCchHhhccCH---HHH
Confidence 011 2469999999999999987431 1 12378889999998654332 466
Q ss_pred HHHHHHHHHH
Q 003878 773 ADRYGFMAKM 782 (789)
Q Consensus 773 ~~~~~fl~~~ 782 (789)
+.+.+||.+.
T Consensus 167 ~~i~~fl~~~ 176 (181)
T 1isp_A 167 SLIKEGLNGG 176 (181)
T ss_dssp HHHHHHHTTT
T ss_pred HHHHHHHhcc
Confidence 6778888653
No 212
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural genomics, protein structure initiative, PSI-2; HET: MSE; 1.50A {Novosphingobium aromaticivorans}
Probab=99.36 E-value=1.9e-11 Score=127.87 Aligned_cols=124 Identities=17% Similarity=0.134 Sum_probs=83.3
Q ss_pred EEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHh
Q 003878 509 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHK 588 (789)
Q Consensus 509 ~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~ 588 (789)
+...+...+| .+|.+...-+++ +.|.||++||..+... .|.. ....|. .||.|+++|.||.|.....
T Consensus 6 ~~~~~~~~~g-~~l~~~~~g~~~-----~~~~vvllHG~~~~~~--~~~~-~~~~L~-~~~~vi~~Dl~G~G~S~~~--- 72 (285)
T 3bwx_A 6 EDRYWTSSDG-LRLHFRAYEGDI-----SRPPVLCLPGLTRNAR--DFED-LATRLA-GDWRVLCPEMRGRGDSDYA--- 72 (285)
T ss_dssp EEEEEECTTS-CEEEEEEECBCT-----TSCCEEEECCTTCCGG--GGHH-HHHHHB-BTBCEEEECCTTBTTSCCC---
T ss_pred ccCeeecCCC-ceEEEEEcCCCC-----CCCcEEEECCCCcchh--hHHH-HHHHhh-cCCEEEeecCCCCCCCCCC---
Confidence 3455677899 898877654332 2477999999765532 3443 455666 5999999999998754321
Q ss_pred cccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecC
Q 003878 589 GGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHV 650 (789)
Q Consensus 589 ~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~ 650 (789)
......+++++.+-+..+++. ...+++.++|||+||.+++.++.++|++++++|+..
T Consensus 73 ---~~~~~~~~~~~a~dl~~~l~~--l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~ 129 (285)
T 3bwx_A 73 ---KDPMTYQPMQYLQDLEALLAQ--EGIERFVAIGTSLGGLLTMLLAAANPARIAAAVLND 129 (285)
T ss_dssp ---SSGGGCSHHHHHHHHHHHHHH--HTCCSEEEEEETHHHHHHHHHHHHCGGGEEEEEEES
T ss_pred ---CCccccCHHHHHHHHHHHHHh--cCCCceEEEEeCHHHHHHHHHHHhCchheeEEEEec
Confidence 001122344444433333332 123589999999999999999999999999998853
No 213
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.35 E-value=6.6e-10 Score=119.60 Aligned_cols=245 Identities=11% Similarity=0.033 Sum_probs=158.2
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
..+..+.|||||++|+-+ +...+|++||+.+++.+. .+.... .
T Consensus 56 ~~v~~~~~s~d~~~l~s~-----s~Dg~v~iWd~~~~~~~~-~~~~~~----------------------~--------- 98 (340)
T 1got_B 56 AKIYAMHWGTDSRLLLSA-----SQDGKLIIWDSYTTNKVH-AIPLRS----------------------S--------- 98 (340)
T ss_dssp SCEEEEEECTTSSEEEEE-----ETTTEEEEEETTTCCEEE-EEECSS----------------------S---------
T ss_pred CceEEEEECCCCCEEEEE-----eCCCcEEEEECCCCCcce-EeecCC----------------------c---------
Confidence 457788999999998843 233489999999986543 111110 0
Q ss_pred eeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEE
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDIL 291 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~ 291 (789)
....++|+|||+.|+....+ ..+.++++.+.......
T Consensus 99 ------------------------~v~~~~~s~~~~~l~s~~~d-------------------~~v~iw~~~~~~~~~~~ 135 (340)
T 1got_B 99 ------------------------WVMTCAYAPSGNYVACGGLD-------------------NICSIYNLKTREGNVRV 135 (340)
T ss_dssp ------------------------CEEEEEECTTSSEEEEEETT-------------------CEEEEEETTTCSBSCEE
T ss_pred ------------------------cEEEEEECCCCCEEEEEeCC-------------------CeEEEEECccCCCccee
Confidence 14678999999988866432 35888888765433223
Q ss_pred EEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEecCC
Q 003878 292 CWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDD 370 (789)
Q Consensus 292 ~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dG 370 (789)
......+...+..+.|+++++ ++..+. ...|.++|+.++. ....+........ ..|+|+|
T Consensus 136 ~~~~~~h~~~v~~~~~~~~~~-l~s~s~-----d~~i~~wd~~~~~-------------~~~~~~~h~~~v~~~~~~~~~ 196 (340)
T 1got_B 136 SRELAGHTGYLSCCRFLDDNQ-IVTSSG-----DTTCALWDIETGQ-------------QTTTFTGHTGDVMSLSLAPDT 196 (340)
T ss_dssp EEEEECCSSCEEEEEEEETTE-EEEEET-----TSCEEEEETTTTE-------------EEEEECCCSSCEEEEEECTTS
T ss_pred EEEecCCCccEEEEEECCCCc-EEEEEC-----CCcEEEEECCCCc-------------EEEEEcCCCCceEEEEECCCC
Confidence 222223344566788999987 433332 2448889998742 1222222212122 3488998
Q ss_pred CEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-
Q 003878 371 TVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE- 449 (789)
Q Consensus 371 ~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~- 449 (789)
+.|+..+. +..|..+|+.++.....+..+. ..+..+.+++++.++++...++ .|.+||+.+++....+..+
T Consensus 197 ~~l~sg~~----d~~v~~wd~~~~~~~~~~~~h~--~~v~~v~~~p~~~~l~s~s~d~--~v~iwd~~~~~~~~~~~~~~ 268 (340)
T 1got_B 197 RLFVSGAC----DASAKLWDVREGMCRQTFTGHE--SDINAICFFPNGNAFATGSDDA--TCRLFDLRADQELMTYSHDN 268 (340)
T ss_dssp SEEEEEET----TSCEEEEETTTCSEEEEECCCS--SCEEEEEECTTSSEEEEEETTS--CEEEEETTTTEEEEEECCTT
T ss_pred CEEEEEeC----CCcEEEEECCCCeeEEEEcCCc--CCEEEEEEcCCCCEEEEEcCCC--cEEEEECCCCcEEEEEccCC
Confidence 87664332 3578899998876333443343 5678899998777888888887 6889999877654444433
Q ss_pred -CeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 450 -IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 450 -~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
...+..++++|+++.++.... -+.+..||..+++
T Consensus 269 ~~~~v~~~~~s~~g~~l~~g~~----d~~i~vwd~~~~~ 303 (340)
T 1got_B 269 IICGITSVSFSKSGRLLLAGYD----DFNCNVWDALKAD 303 (340)
T ss_dssp CCSCEEEEEECTTSSEEEEEET----TSEEEEEETTTCC
T ss_pred cccceEEEEECCCCCEEEEECC----CCeEEEEEcccCc
Confidence 345778899999997765433 3689999988775
No 214
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.35 E-value=8.4e-10 Score=118.40 Aligned_cols=248 Identities=8% Similarity=0.026 Sum_probs=150.0
Q ss_pred EeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceee
Q 003878 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFF 214 (789)
Q Consensus 135 ~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 214 (789)
.++.+||||++++++....+ .|+++|+++++.+.. +....+ ..|+.
T Consensus 92 ~~~~~s~dg~~l~v~~~~~~----~v~~~d~~~~~~~~~-~~~~~~-----------------~~~~~------------ 137 (353)
T 3vgz_A 92 FGATINNTTQTLWFGNTVNS----AVTAIDAKTGEVKGR-LVLDDR-----------------KRTEE------------ 137 (353)
T ss_dssp CSEEEETTTTEEEEEETTTT----EEEEEETTTCCEEEE-EESCCC-----------------CCCSS------------
T ss_pred ceEEECCCCCEEEEEecCCC----EEEEEeCCCCeeEEE-EecCCC-----------------ccccc------------
Confidence 46789999998876654333 799999999976531 111000 00000
Q ss_pred EEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEe
Q 003878 215 FYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWK 294 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~ 294 (789)
.... ....++|+|||+.+|+.... ....|+++++.+... +..+.
T Consensus 138 ----------~~~~-------~~~~~~~s~dg~~l~~~~~~-----------------~~~~i~~~d~~~~~~--~~~~~ 181 (353)
T 3vgz_A 138 ----------VRPL-------QPRELVADDATNTVYISGIG-----------------KESVIWVVDGGNIKL--KTAIQ 181 (353)
T ss_dssp ----------CCCC-------EEEEEEEETTTTEEEEEEES-----------------SSCEEEEEETTTTEE--EEEEC
T ss_pred ----------cCCC-------CCceEEECCCCCEEEEEecC-----------------CCceEEEEcCCCCce--EEEec
Confidence 0000 02568999999998877421 234688888876432 22222
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-c--ccc--eeEEEecC
Q 003878 295 DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-G--FDA--QYEVIAND 369 (789)
Q Consensus 295 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~--~~~--~~~~~s~d 369 (789)
.... ....+.++|||++|++... ...++++|+.++. ....... . ... .-..|+||
T Consensus 182 ~~~~--~~~~~~~s~dg~~l~~~~~-----~~~i~~~d~~~~~-------------~~~~~~~~~~~~~~~~~~~~~s~d 241 (353)
T 3vgz_A 182 NTGK--MSTGLALDSEGKRLYTTNA-----DGELITIDTADNK-------------ILSRKKLLDDGKEHFFINISLDTA 241 (353)
T ss_dssp CCCT--TCCCCEEETTTTEEEEECT-----TSEEEEEETTTTE-------------EEEEEECCCSSSCCCEEEEEEETT
T ss_pred CCCC--ccceEEECCCCCEEEEEcC-----CCeEEEEECCCCe-------------EEEEEEcCCCCCCcccceEEECCC
Confidence 1111 1235789999999887642 3578999998742 1111111 0 010 11358999
Q ss_pred CCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCeEEEEEEECCCCceeeeccc
Q 003878 370 DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLLHQLPI 448 (789)
Q Consensus 370 G~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~ 448 (789)
|+.+|+... ....|+.+|+.+++ ....++... -..+.+++++ .+++....++ .|.+||+++++....+..
T Consensus 242 g~~l~~~~~---~~~~v~~~d~~~~~-~~~~~~~~~---~~~~~~s~dg~~l~v~~~~~~--~v~~~d~~~~~~~~~~~~ 312 (353)
T 3vgz_A 242 RQRAFITDS---KAAEVLVVDTRNGN-ILAKVAAPE---SLAVLFNPARNEAYVTHRQAG--KVSVIDAKSYKVVKTFDT 312 (353)
T ss_dssp TTEEEEEES---SSSEEEEEETTTCC-EEEEEECSS---CCCEEEETTTTEEEEEETTTT--EEEEEETTTTEEEEEEEC
T ss_pred CCEEEEEeC---CCCEEEEEECCCCc-EEEEEEcCC---CceEEECCCCCEEEEEECCCC--eEEEEECCCCeEEEEEec
Confidence 999877653 24689999998876 222333221 1357788754 4665544444 799999998887666655
Q ss_pred CCeeEEEeecccCCcEEEEEEcC-------CCCCcEEEEEE
Q 003878 449 EIGSVNAISARREDSVVFISFTS-------FLIPGIVYQCN 482 (789)
Q Consensus 449 ~~~~v~~~s~s~d~~~l~~~~ss-------~~~P~~ly~~d 482 (789)
+. ....+.+++|++.++++..+ ...|..+++++
T Consensus 313 ~~-~~~~~~~s~dg~~l~v~~~~~~~~~~~~~~~~~v~~i~ 352 (353)
T 3vgz_A 313 PT-HPNSLALSADGKTLYVSVKQKSTKQQEATQPDDVIRIA 352 (353)
T ss_dssp CS-EEEEEEECTTSCEEEEEEECCCBTTBCCSSCEEEEEEE
T ss_pred CC-CCCeEEEcCCCCEEEEEEcccccccccccCCCcEEEEe
Confidence 43 45678899999999888765 23455565554
No 215
>4g4g_A 4-O-methyl-glucuronoyl methylesterase; alpha/beta hydrolase, 3-layer alpha/beta/alpha sandwich, ROS fold, glucuronoyl esterase; 1.55A {Myceliophthora thermophila} PDB: 4g4i_A 4g4j_A*
Probab=99.35 E-value=5.3e-11 Score=127.39 Aligned_cols=117 Identities=13% Similarity=0.011 Sum_probs=89.2
Q ss_pred eEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEee--------cCCCCCChhHHhccc
Q 003878 520 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANI--------RGGGEYGEEWHKGGA 591 (789)
Q Consensus 520 ~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~--------RG~g~~g~~~~~~~~ 591 (789)
..+++.|++|++ .++.|+||.+||+. . .+. +||+++.+|+ +|+.++|. ++..-.
T Consensus 123 ~sf~~~i~lP~g---~~P~Pvii~~~~~~-~------------~~~-~G~A~i~f~~~~va~d~~~gsrG~g~-f~~ly~ 184 (433)
T 4g4g_A 123 ISFSASIRKPSG---AGPFPAIIGIGGAS-I------------PIP-SNVATITFNNDEFGAQMGSGSRGQGK-FYDLFG 184 (433)
T ss_dssp EEEEEEEECCSS---SCCEEEEEEESCCC-S------------CCC-TTSEEEEECHHHHSCCSSGGGTTCSH-HHHHHC
T ss_pred EEEEEEEECCCC---CCCccEEEEECCCc-c------------ccC-CCeEEEEeCCcccccccCCCcCCccc-cccccC
Confidence 556899999987 47899999999742 1 033 8999999997 45556776 443211
Q ss_pred ccCCcchH----HHHHHHHHHHHH----cCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccc
Q 003878 592 LAKKQNCF----DDFISASEYLIS----AGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDM 655 (789)
Q Consensus 592 ~~~~~~~~----~D~~~~~~~L~~----~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~ 655 (789)
.......+ -|+..+++||.. +..+|++||+|+|+|.||..++++++.. ++++++|+.+|..+-
T Consensus 185 ~~~~~gal~aWAWg~~raiDyL~~~~~~~~~VD~~RIgv~G~S~gG~~Al~aaA~D-~Ri~~vi~~~sg~~G 255 (433)
T 4g4g_A 185 RDHSAGSLTAWAWGVDRLIDGLEQVGAQASGIDTKRLGVTGCSRNGKGAFITGALV-DRIALTIPQESGAGG 255 (433)
T ss_dssp TTCSCCHHHHHHHHHHHHHHHHHHHCHHHHCEEEEEEEEEEETHHHHHHHHHHHHC-TTCSEEEEESCCTTT
T ss_pred CccchHHHHHHHHhHHHHHHHHHhccccCCCcChhHEEEEEeCCCcHHHHHHHhcC-CceEEEEEecCCCCc
Confidence 11112222 478889999999 7889999999999999999999999996 489999999987653
No 216
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR family, developmental protei differentiation, neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Probab=99.35 E-value=7.5e-12 Score=130.85 Aligned_cols=125 Identities=10% Similarity=0.006 Sum_probs=82.7
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC---CCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhccccc
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT---PSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALA 593 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~ 593 (789)
+| .+|.+...-+. +...|+||++||..+.... +.|.......|+ ++|.|+++|+||.|...... ...
T Consensus 19 ~~-~~l~y~~~G~~----~~~~p~vvllHG~~~~~~~~~~~~~~~~~~~~L~-~~~~vi~~D~~G~G~s~~~~----~~~ 88 (286)
T 2qmq_A 19 PY-GSVTFTVYGTP----KPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEII-QNFVRVHVDAPGMEEGAPVF----PLG 88 (286)
T ss_dssp TT-EEEEEEEESCC----CTTCCEEEEECCTTCCHHHHHHHHHTSHHHHHHH-TTSCEEEEECTTTSTTCCCC----CTT
T ss_pred CC-eEEEEEeccCC----CCCCCeEEEeCCCCCCchhhhhhhhhhchhHHHh-cCCCEEEecCCCCCCCCCCC----CCC
Confidence 67 78876655322 1246899999998665421 011111345677 68999999999976421110 000
Q ss_pred CCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 594 KKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 594 ~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
....+++++.+.+..+++. .+.+++.++|+|+||.+++.++.++|++++++|+..|..
T Consensus 89 ~~~~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 146 (286)
T 2qmq_A 89 YQYPSLDQLADMIPCILQY--LNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDP 146 (286)
T ss_dssp CCCCCHHHHHHTHHHHHHH--HTCCCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCCC
T ss_pred CCccCHHHHHHHHHHHHHH--hCCCcEEEEEEChHHHHHHHHHHhChhheeeEEEECCCC
Confidence 0012566666655555544 233589999999999999999999999999999988855
No 217
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A {Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Probab=99.35 E-value=6.4e-12 Score=134.16 Aligned_cols=114 Identities=16% Similarity=0.088 Sum_probs=82.1
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCc
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 596 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~ 596 (789)
+| .+|.+... + .++.|.||++||.++.... |... ...|. .+|.|+++|.||.|.... ....
T Consensus 15 ~g-~~l~y~~~---G---~g~~~pvvllHG~~~~~~~--w~~~-~~~L~-~~~~via~Dl~G~G~S~~--------~~~~ 75 (316)
T 3afi_E 15 LG-SSMAYRET---G---AQDAPVVLFLHGNPTSSHI--WRNI-LPLVS-PVAHCIAPDLIGFGQSGK--------PDIA 75 (316)
T ss_dssp TT-EEEEEEEE---S---CTTSCEEEEECCTTCCGGG--GTTT-HHHHT-TTSEEEEECCTTSTTSCC--------CSSC
T ss_pred CC-EEEEEEEe---C---CCCCCeEEEECCCCCchHH--HHHH-HHHHh-hCCEEEEECCCCCCCCCC--------CCCC
Confidence 67 77765543 2 1333589999998776543 3332 34566 569999999999886432 1123
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCC
Q 003878 597 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 651 (789)
Q Consensus 597 ~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p 651 (789)
.+++++.+.+..+++. ...+++.++|+|+||.+++.++.++|++++++|+..+
T Consensus 76 ~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 128 (316)
T 3afi_E 76 YRFFDHVRYLDAFIEQ--RGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEF 128 (316)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEEEHHHHHHHHHHHHCTTTEEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHH--cCCCCEEEEEeCccHHHHHHHHHHCHHhhhheeeecc
Confidence 4677777777666665 2336899999999999999999999999999998765
No 218
>3c6x_A Hydroxynitrilase; atomic resolution, hydroxynitril lyase, catalysis, protonation state, AB initio calculations, substrate bindin; 1.05A {Hevea brasiliensis} SCOP: c.69.1.20 PDB: 1sc9_A 1yas_A* 2g4l_A* 2yas_A 1qj4_A 3c6y_A 3c6z_A 3c70_A 3yas_A 4yas_A 5yas_A* 6yas_A 7yas_A* 1yb6_A* 1yb7_A 1sck_A 1sci_A 1scq_A 1dwo_A 1dwp_A ...
Probab=99.34 E-value=1.5e-11 Score=127.14 Aligned_cols=212 Identities=12% Similarity=0.065 Sum_probs=124.3
Q ss_pred cEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 003878 539 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSR 618 (789)
Q Consensus 539 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~ 618 (789)
|.||++||...... .|.. ....|.++||.|+.+|.||.|..... .....+++++.+.+..+++.-. ..+
T Consensus 4 ~~vvllHG~~~~~~--~w~~-~~~~L~~~g~~via~Dl~G~G~S~~~-------~~~~~~~~~~a~dl~~~l~~l~-~~~ 72 (257)
T 3c6x_A 4 AHFVLIHTICHGAW--IWHK-LKPLLEALGHKVTALDLAASGVDPRQ-------IEEIGSFDEYSEPLLTFLEALP-PGE 72 (257)
T ss_dssp CEEEEECCTTCCGG--GGTT-HHHHHHHTTCEEEEECCTTSTTCSCC-------GGGCCSHHHHTHHHHHHHHTSC-TTC
T ss_pred CcEEEEcCCccCcC--CHHH-HHHHHHhCCCEEEEeCCCCCCCCCCC-------cccccCHHHHHHHHHHHHHhcc-ccC
Confidence 67999999765433 3444 34556548999999999998864321 1112467777776666666521 125
Q ss_pred cEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcccc-----cc----ccc-cc--CC-------------------ccc
Q 003878 619 KLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDM-----LR----YHK-FT--IG-------------------HAW 667 (789)
Q Consensus 619 ~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d~-----~~----~~~-~~--~~-------------------~~~ 667 (789)
++.++|||+||.++..++.++|++++++|...+.... .. ... .. .. ..+
T Consensus 73 ~~~lvGhSmGG~va~~~a~~~p~~v~~lVl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (257)
T 3c6x_A 73 KVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTL 152 (257)
T ss_dssp CEEEEEEETHHHHHHHHHHHHGGGEEEEEEEEECCCCSSSCTTHHHHHHHHHSCCCTTCEEEEEEETTEEEEEEECCHHH
T ss_pred CeEEEEECcchHHHHHHHHhCchhhheEEEEecccCCCCCcchhHHHHHhhcCcchhhhhhhhccCCCCccccccccHHH
Confidence 8999999999999999999999999999987653210 00 000 00 00 000
Q ss_pred hhh-cCCCCcHHHHHHHHhc-CcccCC-------CCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhcc
Q 003878 668 VSD-FGCSEEEEEFYWLIKY-SPLHNV-------RRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCT 738 (789)
Q Consensus 668 ~~e-~g~p~~~~~~~~l~~~-sP~~~v-------~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~ 738 (789)
... +......+........ .|.... ... ........|+|+++|++|..+|+..+.++.+.+..
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~P~l~i~G~~D~~~p~~~~~~~~~~~~~---- 224 (257)
T 3c6x_A 153 LRENLYTLCGPEEYELAKMLTRKGSLFQNILAKRPFF----TKEGYGSIKKIYVWTDQDEIFLPEFQLWQIENYKP---- 224 (257)
T ss_dssp HHHHTSTTSCHHHHHHHHHHCCCBCCCHHHHHHSCCC----CTTTGGGSCEEEEECTTCSSSCHHHHHHHHHHSCC----
T ss_pred HHHHHhcCCCHHHHHHHHHhcCCCccchhhhcccccc----ChhhcCcccEEEEEeCCCcccCHHHHHHHHHHCCC----
Confidence 000 0000011111111111 111000 000 00001246899999999999999988877776542
Q ss_pred CCCCCCCCCcEEEEEeCCCCcCCCCchhhHHHHHHHHHHHHHH
Q 003878 739 SLENSPQTNPIIGRIERKAGHGVGLPTQKMIDEAADRYGFMAK 781 (789)
Q Consensus 739 ~~~~~~~~~~~~l~~~~~~gH~~~~~~~~~~~~~~~~~~fl~~ 781 (789)
.++++++++||....... .+..+.+.+|+..
T Consensus 225 ----------~~~~~i~~~gH~~~~e~P--~~~~~~l~~f~~~ 255 (257)
T 3c6x_A 225 ----------DKVYKVEGGDHKLQLTKT--KEIAEILQEVADT 255 (257)
T ss_dssp ----------SEEEECCSCCSCHHHHSH--HHHHHHHHHHHHH
T ss_pred ----------CeEEEeCCCCCCcccCCH--HHHHHHHHHHHHh
Confidence 278899999998643322 3455667788764
No 219
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.34 E-value=1.2e-09 Score=116.01 Aligned_cols=271 Identities=14% Similarity=0.049 Sum_probs=170.7
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccce
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIF 212 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 212 (789)
.+..+++||||++|+.+. ...|++||+.++...... .... + ..+.+. ..+..+.|++
T Consensus 53 ~v~~~~~~~~~~~l~~~~------dg~i~iw~~~~~~~~~~~-~~~~-~-~~~~~~----v~~~~~~~~~---------- 109 (337)
T 1gxr_A 53 VVCAVTISNPTRHVYTGG------KGCVKVWDISHPGNKSPV-SQLD-C-LNRDNY----IRSCKLLPDG---------- 109 (337)
T ss_dssp CCCEEEECSSSSEEEEEC------BSEEEEEETTSTTCCSCS-EEEE-C-SCTTSB----EEEEEECTTS----------
T ss_pred ceEEEEEecCCcEEEEcC------CCeEEEEECCCCCceeee-eccc-c-cCCCCc----EEEEEEcCCC----------
Confidence 467789999999998653 247999999987532211 1000 0 000111 1122233555
Q ss_pred eeEEEeeeccccceeeeeeec------------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEE
Q 003878 213 FFFYLFSLVKSTIYSFWSVVS------------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYH 280 (789)
Q Consensus 213 ~~~~~~~s~~~g~~~l~~~~~------------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 280 (789)
.+++++..+|...+|.+.. .-....++|+||++.|+....+ ..|+++
T Consensus 110 --~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-------------------g~v~~~ 168 (337)
T 1gxr_A 110 --CTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSD-------------------GNIAVW 168 (337)
T ss_dssp --SEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETT-------------------SCEEEE
T ss_pred --CEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCC-------------------CcEEEE
Confidence 3566777888888887654 1113578999999998876432 248888
Q ss_pred ECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc
Q 003878 281 FLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD 360 (789)
Q Consensus 281 ~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 360 (789)
++.+.. ....+.. +...+..+.|+|||++|+.... ...|+++|+.++. ..........
T Consensus 169 d~~~~~--~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~-----dg~i~~~d~~~~~-------------~~~~~~~~~~ 226 (337)
T 1gxr_A 169 DLHNQT--LVRQFQG--HTDGASCIDISNDGTKLWTGGL-----DNTVRSWDLREGR-------------QLQQHDFTSQ 226 (337)
T ss_dssp ETTTTE--EEEEECC--CSSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTTE-------------EEEEEECSSC
T ss_pred eCCCCc--eeeeeec--ccCceEEEEECCCCCEEEEEec-----CCcEEEEECCCCc-------------eEeeecCCCc
Confidence 887642 2223332 3344678999999999987653 3568999998742 1111111111
Q ss_pred ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCC
Q 003878 361 AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNG 440 (789)
Q Consensus 361 ~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG 440 (789)
.....|+|+|+.+++.+. +..|..+++.+++ ...+..+. ..+..+.+++++.++++...++ .|++|++.++
T Consensus 227 v~~~~~s~~~~~l~~~~~----~~~i~~~~~~~~~-~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg--~i~~~~~~~~ 297 (337)
T 1gxr_A 227 IFSLGYCPTGEWLAVGME----SSNVEVLHVNKPD-KYQLHLHE--SCVLSLKFAYCGKWFVSTGKDN--LLNAWRTPYG 297 (337)
T ss_dssp EEEEEECTTSSEEEEEET----TSCEEEEETTSSC-EEEECCCS--SCEEEEEECTTSSEEEEEETTS--EEEEEETTTC
T ss_pred eEEEEECCCCCEEEEEcC----CCcEEEEECCCCC-eEEEcCCc--cceeEEEECCCCCEEEEecCCC--cEEEEECCCC
Confidence 122348999998887654 3568999998876 33443333 5688899998777777787776 7899999887
Q ss_pred ceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEEC
Q 003878 441 SLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNL 483 (789)
Q Consensus 441 ~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl 483 (789)
+...... ....+..+.++++++.++.... -+.++.|++
T Consensus 298 ~~~~~~~-~~~~v~~~~~s~~~~~l~~~~~----dg~i~iw~~ 335 (337)
T 1gxr_A 298 ASIFQSK-ESSSVLSCDISVDDKYIVTGSG----DKKATVYEV 335 (337)
T ss_dssp CEEEEEE-CSSCEEEEEECTTSCEEEEEET----TSCEEEEEE
T ss_pred eEEEEec-CCCcEEEEEECCCCCEEEEecC----CCeEEEEEE
Confidence 7643332 3455777889999987664432 345666653
No 220
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.34 E-value=6.1e-10 Score=117.87 Aligned_cols=274 Identities=14% Similarity=0.093 Sum_probs=169.6
Q ss_pred cEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccc
Q 003878 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRG 210 (789)
Q Consensus 131 ~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 210 (789)
...+..+.+||||++||.+.. ...|++||+.+++... .+... ..+ ..+..+.|++
T Consensus 23 ~~~v~~~~~s~~~~~l~s~~~-----dg~i~iw~~~~~~~~~-~~~~h------~~~-----v~~~~~~~~~-------- 77 (312)
T 4ery_A 23 TKAVSSVKFSPNGEWLASSSA-----DKLIKIWGAYDGKFEK-TISGH------KLG-----ISDVAWSSDS-------- 77 (312)
T ss_dssp SSCEEEEEECTTSSEEEEEET-----TSCEEEEETTTCCEEE-EECCC------SSC-----EEEEEECTTS--------
T ss_pred CCcEEEEEECCCCCEEEEeeC-----CCeEEEEeCCCcccch-hhccC------CCc-----eEEEEEcCCC--------
Confidence 345788999999999985432 3369999999886543 11111 000 1122334565
Q ss_pred ceeeEEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEE
Q 003878 211 IFFFFYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYH 280 (789)
Q Consensus 211 ~~~~~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 280 (789)
.+++++..+|...+|.+.. .-....++|+||++.|+....+ ..|++|
T Consensus 78 ----~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d-------------------~~i~iw 134 (312)
T 4ery_A 78 ----NLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFD-------------------ESVRIW 134 (312)
T ss_dssp ----SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT-------------------SCEEEE
T ss_pred ----CEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCC-------------------CcEEEE
Confidence 4677888899999998654 1123567899999988766433 248889
Q ss_pred ECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc
Q 003878 281 FLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD 360 (789)
Q Consensus 281 ~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 360 (789)
++.+... ...+. .+...+..+.|+|||++|+....+ ..|.++|+.++. ....+.....
T Consensus 135 d~~~~~~--~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~~wd~~~~~-------------~~~~~~~~~~ 192 (312)
T 4ery_A 135 DVKTGKC--LKTLP--AHSDPVSAVHFNRDGSLIVSSSYD-----GLCRIWDTASGQ-------------CLKTLIDDDN 192 (312)
T ss_dssp ETTTCCE--EEEEC--CCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCC-------------EEEEECCSSC
T ss_pred ECCCCEE--EEEec--CCCCcEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCc-------------eeeEEeccCC
Confidence 9876532 22232 233346688999999998766543 348889988742 1222221111
Q ss_pred --ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEe-cCCEEEEEEEeCCeEEEEEEEC
Q 003878 361 --AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAV-NLNQMIVSYLSDVKYVLQIRDL 437 (789)
Q Consensus 361 --~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~-~~~~lv~~~~~~g~~~L~~~dl 437 (789)
.....|+|+|+.|+..+. +..|..+|+.+++....+..+..........+. .++.++++...++ .|++||+
T Consensus 193 ~~~~~~~~~~~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg--~i~vwd~ 266 (312)
T 4ery_A 193 PPVSFVKFSPNGKYILAATL----DNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDN--LVYIWNL 266 (312)
T ss_dssp CCEEEEEECTTSSEEEEEET----TTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTS--CEEEEET
T ss_pred CceEEEEECCCCCEEEEEcC----CCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCC--EEEEEEC
Confidence 122458999998876543 357999999877533334333322221122233 3366777777776 6899999
Q ss_pred CCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEE
Q 003878 438 KNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCN 482 (789)
Q Consensus 438 ~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~d 482 (789)
.+++....+..+...+..++++|+++.++.. +...-.++..|+
T Consensus 267 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~--~~~~d~~i~~W~ 309 (312)
T 4ery_A 267 QTKEIVQKLQGHTDVVISTACHPTENIIASA--ALENDKTIKLWK 309 (312)
T ss_dssp TTCCEEEEECCCSSCEEEEEECSSSSEEEEE--ECTTTCCEEEEE
T ss_pred CCchhhhhhhccCCcEEEEeecCcCCceEEE--EccCCccEEEec
Confidence 9888767776666667788899998866533 222334455554
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.33 E-value=1.3e-10 Score=137.87 Aligned_cols=261 Identities=11% Similarity=0.041 Sum_probs=167.3
Q ss_pred eEeCCEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCC--------ceEE
Q 003878 87 FKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSG--------SDWA 158 (789)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g--------~~~~ 158 (789)
+++|.++.|....++.....||+++..+++.....-.+ ....+++|| ||+.|+|+..... ....
T Consensus 137 SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~~-------~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~ 208 (693)
T 3iuj_A 137 SRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPLKD-------VKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQH 208 (693)
T ss_dssp CTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEEE-------EESCCCEEE-TTTEEEEEESSCCC-------CCCC
T ss_pred CCCCCEEEEEEecCCCceEEEEEEECCCCCCCccccCC-------ceeccEEEe-CCCEEEEEEecCcccccccccCCCc
Confidence 45788999999888888888999987666532211000 113568899 9999999986532 3356
Q ss_pred EEEEEEcCCCceecccccccccccccCccceeeeeeccccccc-cccccccccceeeEEEeeeccccceeeeeeeccccc
Q 003878 159 TIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPT-YKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKF 237 (789)
Q Consensus 159 ~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~ 237 (789)
+|+++++.|+......+... ++ . .. ..
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~---------------------~~~~------------------------~~-------~~ 236 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGA---------------------IPAQ------------------------HH-------RY 236 (693)
T ss_dssp EEEEEETTSCGGGCEEEESC---------------------SGGG------------------------CC-------SE
T ss_pred EEEEEECCCCcccceEEEec---------------------CCCC------------------------Ce-------EE
Confidence 89999998875322111111 00 0 00 13
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.++.|||||+.|+++.... ....+||++++.++..+-+.+....+ ... .+ ++++|++|+|.
T Consensus 237 ~~~~~SpDg~~l~~~~~~~---------------~~~~~i~~~d~~~~~~~~~~l~~~~~-~~~--~~-~~~~g~~l~~~ 297 (693)
T 3iuj_A 237 VGATVTEDDRFLLISAANS---------------TSGNRLYVKDLSQENAPLLTVQGDLD-ADV--SL-VDNKGSTLYLL 297 (693)
T ss_dssp EEEEECTTSCEEEEEEESS---------------SSCCEEEEEETTSTTCCCEEEECSSS-SCE--EE-EEEETTEEEEE
T ss_pred EEEEEcCCCCEEEEEEccC---------------CCCcEEEEEECCCCCCceEEEeCCCC-ceE--EE-EeccCCEEEEE
Confidence 5789999999999986532 22357999999876544444443332 221 22 78999999998
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCe
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW 397 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~ 397 (789)
++.. .....|+.++++++. ...+..++....... .|+++|++|++...++ ...+|++++++++. .
T Consensus 298 t~~~-~~~~~l~~~d~~~~~-----------~~~~~~l~~~~~~~~-~~s~~g~~lv~~~~~~-g~~~l~~~d~~g~~-~ 362 (693)
T 3iuj_A 298 TNRD-APNRRLVTVDAANPG-----------PAHWRDLIPERQQVL-TVHSGSGYLFAEYMVD-ATARVEQFDYEGKR-V 362 (693)
T ss_dssp ECTT-CTTCEEEEEETTSCC-----------GGGCEEEECCCSSCE-EEEEETTEEEEEEEET-TEEEEEEECTTSCE-E
T ss_pred ECCC-CCCCEEEEEeCCCCC-----------ccccEEEecCCCCEE-EEEEECCEEEEEEEEC-CeeEEEEEECCCCe-e
Confidence 7653 235789999998742 112445554433334 6899999999887765 45789999998654 3
Q ss_pred EEeccCCCCceeeeEEEecC-CEEEEEEEe-CCeEEEEEEECCCCce
Q 003878 398 FEVIPEAERDVLESATAVNL-NQMIVSYLS-DVKYVLQIRDLKNGSL 442 (789)
Q Consensus 398 ~~l~~~~~~~~i~~v~~~~~-~~lv~~~~~-~g~~~L~~~dl~tG~~ 442 (789)
+.+..+ ....+..+.++++ +.+++.+.. .....|+.+|+++|+.
T Consensus 363 ~~l~~p-~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 363 REVALP-GLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp EEECCS-SSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred EEeecC-CCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 444222 2245556665543 556666554 3346899999987764
No 222
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold; 1.90A {Plesiocystis pacifica}
Probab=99.33 E-value=1.3e-11 Score=130.65 Aligned_cols=104 Identities=14% Similarity=0.091 Sum_probs=73.7
Q ss_pred ccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 003878 538 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 617 (789)
Q Consensus 538 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~ 617 (789)
.|.||++||.++.... |... ...|.++||.|+++|.||.|..... ......+++++.+.+..+++. ...
T Consensus 46 g~~vvllHG~~~~~~~--w~~~-~~~L~~~g~rvia~Dl~G~G~S~~~------~~~~~~~~~~~a~dl~~ll~~--l~~ 114 (297)
T 2xt0_A 46 EHTFLCLHGEPSWSFL--YRKM-LPVFTAAGGRVVAPDLFGFGRSDKP------TDDAVYTFGFHRRSLLAFLDA--LQL 114 (297)
T ss_dssp SCEEEEECCTTCCGGG--GTTT-HHHHHHTTCEEEEECCTTSTTSCEE------SCGGGCCHHHHHHHHHHHHHH--HTC
T ss_pred CCeEEEECCCCCccee--HHHH-HHHHHhCCcEEEEeCCCCCCCCCCC------CCcccCCHHHHHHHHHHHHHH--hCC
Confidence 4789999998765433 3333 3445548999999999998864311 011133556665555555544 123
Q ss_pred CcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 618 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 618 ~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
+++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 115 ~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~~ 149 (297)
T 2xt0_A 115 ERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTA 149 (297)
T ss_dssp CSEEEEECHHHHHHHTTHHHHCTTSEEEEEEESCC
T ss_pred CCEEEEEECchHHHHHHHHHhChHHhcEEEEECCC
Confidence 68999999999999999999999999999988764
No 223
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.33 E-value=5.9e-10 Score=120.84 Aligned_cols=261 Identities=9% Similarity=-0.007 Sum_probs=164.4
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
+...|..++|||||++||- |+...+|++||+.+++.... +... .. -..+..+.|++
T Consensus 63 H~~~V~~~~~s~d~~~l~s-----~s~Dg~v~vWd~~~~~~~~~-~~~~-------~~----~v~~~~~sp~g------- 118 (354)
T 2pbi_B 63 HGNKVLCMDWCKDKRRIVS-----SSQDGKVIVWDSFTTNKEHA-VTMP-------CT----WVMACAYAPSG------- 118 (354)
T ss_dssp CSSCEEEEEECTTSSEEEE-----EETTSEEEEEETTTCCEEEE-EECS-------SS----CCCEEEECTTS-------
T ss_pred CCCeEEEEEECCCCCEEEE-----EeCCCeEEEEECCCCCcceE-EecC-------CC----CEEEEEECCCC-------
Confidence 3345788999999999883 33445899999998864321 1110 00 01122334666
Q ss_pred cceeeEEEeeeccccceeeeeeecc----------------cccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCc
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVSQ----------------FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNL 273 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~~----------------~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~ 273 (789)
..++++..++...+|.+... -....++|+||++.|+....+
T Consensus 119 -----~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D------------------ 175 (354)
T 2pbi_B 119 -----CAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGD------------------ 175 (354)
T ss_dssp -----SEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETT------------------
T ss_pred -----CEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCC------------------
Confidence 35677788888899876431 113568999999988865432
Q ss_pred ccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEec--CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCc
Q 003878 274 YHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE--DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLP 351 (789)
Q Consensus 274 ~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~Sp--DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~ 351 (789)
..|.+|++.++.. +..+.... ..+..+.++| +|++|+..+.+ ..|.++|+.++. .
T Consensus 176 -~~v~lwd~~~~~~--~~~~~~h~--~~v~~~~~~~~~~g~~l~sgs~D-----g~v~~wd~~~~~-------------~ 232 (354)
T 2pbi_B 176 -GTCALWDVESGQL--LQSFHGHG--ADVLCLDLAPSETGNTFVSGGCD-----KKAMVWDMRSGQ-------------C 232 (354)
T ss_dssp -SEEEEEETTTCCE--EEEEECCS--SCEEEEEECCCSSCCEEEEEETT-----SCEEEEETTTCC-------------E
T ss_pred -CcEEEEeCCCCeE--EEEEcCCC--CCeEEEEEEeCCCCCEEEEEeCC-----CeEEEEECCCCc-------------E
Confidence 3588999876532 23344332 2344566666 67787765533 448899998742 1
Q ss_pred cEeeeccccce-eEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeE
Q 003878 352 FVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKY 430 (789)
Q Consensus 352 ~~~l~~~~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~ 430 (789)
...+....... -..|+|+|+.|+..+. +..|..+|+..+.....+..+.....+..+.+++++.++++...++
T Consensus 233 ~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~-- 306 (354)
T 2pbi_B 233 VQAFETHESDVNSVRYYPSGDAFASGSD----DATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDY-- 306 (354)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS--
T ss_pred EEEecCCCCCeEEEEEeCCCCEEEEEeC----CCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCC--
Confidence 22222111112 2348899988775443 3568889987764222222222223466788888777888888776
Q ss_pred EEEEEECCCCceeeecccCCeeEEEeecccCCcEEE
Q 003878 431 VLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVF 466 (789)
Q Consensus 431 ~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~ 466 (789)
.|++||+.+|+.+..+..+...|..++++|+++.++
T Consensus 307 ~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 307 TINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred cEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEE
Confidence 789999987877666665677788899999998655
No 224
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.32 E-value=3.3e-10 Score=125.51 Aligned_cols=271 Identities=13% Similarity=0.077 Sum_probs=173.0
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
+...+..+.+||||++|+-+ +...+|++||+.+++... .+... .+... +..+.|++
T Consensus 107 h~~~V~~~~~~p~~~~l~s~-----s~Dg~i~vwd~~~~~~~~-~l~~h-------~~~V~----~v~~~~~~------- 162 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSA-----SEDATIKVWDYETGDFER-TLKGH-------TDSVQ----DISFDHSG------- 162 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEE-----ESSSCEEEEETTTCCCCE-EECCC-------SSCEE----EEEECTTS-------
T ss_pred cCCcEEEEEEcCCCCEEEEE-----eCCCeEEEEECCCCcEEE-EEecc-------CCcEE----EEEEcCCC-------
Confidence 34467889999999998843 334579999999986543 12111 11011 11123455
Q ss_pred cceeeEEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEE
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 279 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 279 (789)
.+++++..+|+..||.+.. .-....++|+|||+.|+.... ...|.+
T Consensus 163 -----~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~-------------------D~~i~~ 218 (410)
T 1vyh_C 163 -----KLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASR-------------------DKTIKM 218 (410)
T ss_dssp -----SEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEET-------------------TSEEEE
T ss_pred -----CEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeC-------------------CCeEEE
Confidence 4788889999999997654 112467899999998876543 246899
Q ss_pred EECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc
Q 003878 280 HFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF 359 (789)
Q Consensus 280 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~ 359 (789)
|++.++.. +..+.. +...+..+.++|||++|+..+.+ ..|.++|+.++. ....+....
T Consensus 219 wd~~~~~~--~~~~~~--h~~~v~~~~~~~~g~~l~s~s~D-----~~v~vwd~~~~~-------------~~~~~~~h~ 276 (410)
T 1vyh_C 219 WEVQTGYC--VKTFTG--HREWVRMVRPNQDGTLIASCSND-----QTVRVWVVATKE-------------CKAELREHR 276 (410)
T ss_dssp EETTTCCE--EEEEEC--CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCC-------------EEEEECCCS
T ss_pred EECCCCcE--EEEEeC--CCccEEEEEECCCCCEEEEEcCC-----CeEEEEECCCCc-------------eeeEecCCC
Confidence 99976542 233333 33456678999999998766543 348888887642 111111111
Q ss_pred ccee-EEEecC--------------------CCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCC
Q 003878 360 DAQY-EVIAND--------------------DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN 418 (789)
Q Consensus 360 ~~~~-~~~s~d--------------------G~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~ 418 (789)
.... ..|+|+ |..|+..+ .+..|..+|+.++.....+..+. ..+..+.+++++
T Consensus 277 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs----~D~~i~iwd~~~~~~~~~~~~h~--~~v~~v~~~~~g 350 (410)
T 1vyh_C 277 HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGS----RDKTIKMWDVSTGMCLMTLVGHD--NWVRGVLFHSGG 350 (410)
T ss_dssp SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEE----TTSEEEEEETTTTEEEEEEECCS--SCEEEEEECSSS
T ss_pred ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEe----CCCeEEEEECCCCceEEEEECCC--CcEEEEEEcCCC
Confidence 1111 225554 44444322 24679999998876344454444 467889998877
Q ss_pred EEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEE
Q 003878 419 QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCN 482 (789)
Q Consensus 419 ~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~d 482 (789)
..+++...++ .|++||+.+++....+..+...|..+.+++++..++ +.+ .-..+..|+
T Consensus 351 ~~l~s~s~D~--~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~l~-sgs---~D~~i~vW~ 408 (410)
T 1vyh_C 351 KFILSCADDK--TLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTAPYVV-TGS---VDQTVKVWE 408 (410)
T ss_dssp SCEEEEETTT--EEEEECCTTSCCCEEEECCSSCEEEEEECSSSSCEE-EEE---TTSEEEEEC
T ss_pred CEEEEEeCCC--eEEEEECCCCceEEEEcCCCCcEEEEEEcCCCCEEE-EEe---CCCcEEEEe
Confidence 7888888887 799999988876667766666788899999988654 222 224555554
No 225
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=99.32 E-value=6.2e-12 Score=133.95 Aligned_cols=104 Identities=15% Similarity=0.095 Sum_probs=74.0
Q ss_pred ccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 003878 538 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 617 (789)
Q Consensus 538 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~ 617 (789)
.|.||++||.++.... |... ...|+++||.|+++|.||.|..... ......+++++.+.+..|++. ...
T Consensus 47 g~~vvllHG~~~~~~~--w~~~-~~~L~~~g~rvia~Dl~G~G~S~~~------~~~~~y~~~~~a~dl~~ll~~--l~~ 115 (310)
T 1b6g_A 47 EDVFLCLHGEPTWSYL--YRKM-IPVFAESGARVIAPDFFGFGKSDKP------VDEEDYTFEFHRNFLLALIER--LDL 115 (310)
T ss_dssp SCEEEECCCTTCCGGG--GTTT-HHHHHHTTCEEEEECCTTSTTSCEE------SCGGGCCHHHHHHHHHHHHHH--HTC
T ss_pred CCEEEEECCCCCchhh--HHHH-HHHHHhCCCeEEEeCCCCCCCCCCC------CCcCCcCHHHHHHHHHHHHHH--cCC
Confidence 4789999998765543 3333 3445547999999999998764311 001234566666555555544 123
Q ss_pred CcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 618 RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 618 ~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
+++.++|||+||.+++.++.++|++++++|+..+.
T Consensus 116 ~~~~lvGhS~Gg~va~~~A~~~P~rv~~Lvl~~~~ 150 (310)
T 1b6g_A 116 RNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAX 150 (310)
T ss_dssp CSEEEEECTHHHHHHTTSGGGSGGGEEEEEEESCC
T ss_pred CCEEEEEcChHHHHHHHHHHhChHhheEEEEeccc
Confidence 58999999999999999999999999999987763
No 226
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.32 E-value=5.7e-10 Score=121.59 Aligned_cols=206 Identities=13% Similarity=0.022 Sum_probs=132.0
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccccee
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFF 213 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 213 (789)
+..+++||||++||.+. |+...+|+|||+++++.+.. +... +
T Consensus 136 ~~~v~fSpDg~~la~as---~~~d~~i~iwd~~~~~~~~~-~~~~--------~-------------------------- 177 (365)
T 4h5i_A 136 TKLVYISREGTVAAIAS---SKVPAIMRIIDPSDLTEKFE-IETR--------G-------------------------- 177 (365)
T ss_dssp EEEEEECTTSSCEEEEE---SCSSCEEEEEETTTTEEEEE-EECS--------S--------------------------
T ss_pred EEEEEEcCCCCEEEEEE---CCCCCEEEEeECCCCcEEEE-eCCC--------C--------------------------
Confidence 56788999999998764 34456899999999876532 2111 0
Q ss_pred eEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEE
Q 003878 214 FFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCW 293 (789)
Q Consensus 214 ~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~ 293 (789)
...+++|||||+.|+....+ .+.+++..++... ...
T Consensus 178 ----------------------~V~~v~fspdg~~l~s~s~~--------------------~~~~~~~~~~~~~--~~~ 213 (365)
T 4h5i_A 178 ----------------------EVKDLHFSTDGKVVAYITGS--------------------SLEVISTVTGSCI--ARK 213 (365)
T ss_dssp ----------------------CCCEEEECTTSSEEEEECSS--------------------CEEEEETTTCCEE--EEE
T ss_pred ----------------------ceEEEEEccCCceEEeccce--------------------eEEEEEeccCcce--eee
Confidence 25789999999999876321 2555665544321 111
Q ss_pred ecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEecCCCE
Q 003878 294 KDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTV 372 (789)
Q Consensus 294 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dG~~ 372 (789)
....+...+..+.|+|||++++..+.++. ....++.+++...... ......+........ ..|+|||+.
T Consensus 214 ~~~~~~~~v~~v~fspdg~~l~~~s~d~~-~~~~i~~~~~~~~~~~---------~~~~~~~~~~~~~V~~~~~Spdg~~ 283 (365)
T 4h5i_A 214 TDFDKNWSLSKINFIADDTVLIAASLKKG-KGIVLTKISIKSGNTS---------VLRSKQVTNRFKGITSMDVDMKGEL 283 (365)
T ss_dssp CCCCTTEEEEEEEEEETTEEEEEEEESSS-CCEEEEEEEEETTEEE---------EEEEEEEESSCSCEEEEEECTTSCE
T ss_pred ecCCCCCCEEEEEEcCCCCEEEEEecCCc-ceeEEeecccccceec---------ceeeeeecCCCCCeEeEEECCCCCc
Confidence 22233455678999999999988776543 2345777776653100 000111222222222 348999998
Q ss_pred EEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECC
Q 003878 373 FTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLK 438 (789)
Q Consensus 373 l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~ 438 (789)
|+.-+. +..|.++|+.+++....+.. .....+..+++++++.++++.+.|+ .|++|++.
T Consensus 284 lasgs~----D~~V~iwd~~~~~~~~~~~~-gH~~~V~~v~fSpdg~~laS~S~D~--tvrvw~ip 342 (365)
T 4h5i_A 284 AVLASN----DNSIALVKLKDLSMSKIFKQ-AHSFAITEVTISPDSTYVASVSAAN--TIHIIKLP 342 (365)
T ss_dssp EEEEET----TSCEEEEETTTTEEEEEETT-SSSSCEEEEEECTTSCEEEEEETTS--EEEEEECC
T ss_pred eEEEcC----CCEEEEEECCCCcEEEEecC-cccCCEEEEEECCCCCEEEEEeCCC--eEEEEEcC
Confidence 886554 35689999988763333332 2235688999999888999999998 68888875
No 227
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.32 E-value=1.7e-10 Score=124.73 Aligned_cols=199 Identities=10% Similarity=0.041 Sum_probs=129.1
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|+|||+.|+....+ ..|++|++.++. .+..+. .+...+..+.|+|+++.+++
T Consensus 130 V~~v~~spdg~~l~sgs~d-------------------~~i~iwd~~~~~--~~~~~~--~h~~~V~~~~~~~~~~~~l~ 186 (344)
T 4gqb_B 130 VSTVSVLSSGTQAVSGSKD-------------------ICIKVWDLAQQV--VLSSYR--AHAAQVTCVAASPHKDSVFL 186 (344)
T ss_dssp EEEEEECTTSSEEEEEETT-------------------SCEEEEETTTTE--EEEEEC--CCSSCEEEEEECSSCTTEEE
T ss_pred EEEEEECCCCCEEEEEeCC-------------------CeEEEEECCCCc--EEEEEc--CcCCceEEEEecCCCCCcee
Confidence 5789999999999866433 248899987642 222333 33445678999999987766
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec---cccceeEEEecCCCEEEEEECCCCCCceEEEEECCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID---GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE 393 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~ 393 (789)
+... ...|.++|+.++. +...+.. +.......|+|++..+++.... ++.|..+|+.+
T Consensus 187 s~s~----D~~v~iwd~~~~~-------------~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~---dg~v~~wd~~~ 246 (344)
T 4gqb_B 187 SCSE----DNRILLWDTRCPK-------------PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDE---NGTVSLVDTKS 246 (344)
T ss_dssp EEET----TSCEEEEETTSSS-------------CEEECC----CCCEEEEEECSSCTTEEEEEET---TSEEEEEESCC
T ss_pred eecc----ccccccccccccc-------------eeeeeecceeeccceeeeecCCCCcceEEecc---CCcEEEEECCC
Confidence 6543 2448889998742 1112211 1111123478866555444332 46799999988
Q ss_pred CCCeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCC
Q 003878 394 PNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSF 472 (789)
Q Consensus 394 ~~~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~ 472 (789)
++....+..+. ..+..+.+++++ .++++...|+ .|++||+.+++. ..+..+.+.|..++++|+++.++.+.+.
T Consensus 247 ~~~~~~~~~h~--~~v~~v~fsp~g~~~lasgs~D~--~i~vwd~~~~~~-~~~~~H~~~V~~v~~sp~~~~llas~s~- 320 (344)
T 4gqb_B 247 TSCVLSSAVHS--QCVTGLVFSPHSVPFLASLSEDC--SLAVLDSSLSEL-FRSQAHRDFVRDATWSPLNHSLLTTVGW- 320 (344)
T ss_dssp --CCEEEECCS--SCEEEEEECSSSSCCEEEEETTS--CEEEECTTCCEE-EEECCCSSCEEEEEECSSSTTEEEEEET-
T ss_pred CcEEEEEcCCC--CCEEEEEEccCCCeEEEEEeCCC--eEEEEECCCCcE-EEEcCCCCCEEEEEEeCCCCeEEEEEcC-
Confidence 76455555454 567889998854 6788888887 688999987765 3444456778889999999877665532
Q ss_pred CCCcEEEEEECCCC
Q 003878 473 LIPGIVYQCNLKTE 486 (789)
Q Consensus 473 ~~P~~ly~~dl~tg 486 (789)
-.++..|++.+.
T Consensus 321 --D~~v~~w~v~~~ 332 (344)
T 4gqb_B 321 --DHQVVHHVVPTE 332 (344)
T ss_dssp --TSCEEEEECCC-
T ss_pred --CCeEEEEECCCC
Confidence 357888887665
No 228
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.32 E-value=5.6e-10 Score=118.12 Aligned_cols=242 Identities=12% Similarity=0.085 Sum_probs=157.3
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccce
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIF 212 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 212 (789)
.|..+++||||++||-+. ...+|++||++++..+. .+... ..
T Consensus 15 ~V~~~~fsp~~~~l~s~~-----~dg~v~lWd~~~~~~~~-~~~~~----------------------~~---------- 56 (304)
T 2ynn_A 15 RVKGIDFHPTEPWVLTTL-----YSGRVELWNYETQVEVR-SIQVT----------------------ET---------- 56 (304)
T ss_dssp CEEEEEECSSSSEEEEEE-----TTSEEEEEETTTTEEEE-EEECC----------------------SS----------
T ss_pred ceEEEEECCCCCEEEEEc-----CCCcEEEEECCCCceeE-Eeecc----------------------CC----------
Confidence 478899999999998543 23489999999986543 12111 00
Q ss_pred eeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEE
Q 003878 213 FFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILC 292 (789)
Q Consensus 213 ~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~ 292 (789)
....++|+||++.|+....+ ..|++|++.++. .+..
T Consensus 57 -----------------------~v~~~~~~~~~~~l~s~s~d-------------------~~i~vwd~~~~~--~~~~ 92 (304)
T 2ynn_A 57 -----------------------PVRAGKFIARKNWIIVGSDD-------------------FRIRVFNYNTGE--KVVD 92 (304)
T ss_dssp -----------------------CEEEEEEEGGGTEEEEEETT-------------------SEEEEEETTTCC--EEEE
T ss_pred -----------------------cEEEEEEeCCCCEEEEECCC-------------------CEEEEEECCCCc--EEEE
Confidence 24678999999998866432 368899987653 2333
Q ss_pred EecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecc-cccee-EEEec-C
Q 003878 293 WKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG-FDAQY-EVIAN-D 369 (789)
Q Consensus 293 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~-~~~~~-~~~s~-d 369 (789)
+.. +...+..++++|++++|+..+.+ ..|.++|+.++. .......+ ..... ..|+| +
T Consensus 93 ~~~--h~~~v~~~~~~~~~~~l~sgs~D-----~~v~lWd~~~~~-------------~~~~~~~~h~~~v~~v~~~p~~ 152 (304)
T 2ynn_A 93 FEA--HPDYIRSIAVHPTKPYVLSGSDD-----LTVKLWNWENNW-------------ALEQTFEGHEHFVMCVAFNPKD 152 (304)
T ss_dssp EEC--CSSCEEEEEECSSSSEEEEEETT-----SCEEEEEGGGTT-------------EEEEEECCCCSCEEEEEECTTC
T ss_pred EeC--CCCcEEEEEEcCCCCEEEEECCC-----CeEEEEECCCCc-------------chhhhhcccCCcEEEEEECCCC
Confidence 443 34457789999999998765533 348888887631 11122221 11122 34788 4
Q ss_pred CCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEec--CCEEEEEEEeCCeEEEEEEECCCCceeeecc
Q 003878 370 DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN--LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP 447 (789)
Q Consensus 370 G~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~--~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~ 447 (789)
+..|+..+ .+..|..+|+..+.....+.... ...+..+.+.+ ++.++++...++ .|.+||+.+++.+..+.
T Consensus 153 ~~~l~sgs----~D~~v~iwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~s~s~D~--~i~iWd~~~~~~~~~~~ 225 (304)
T 2ynn_A 153 PSTFASGC----LDRTVKVWSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDL--TIKIWDYQTKSCVATLE 225 (304)
T ss_dssp TTEEEEEE----TTSEEEEEETTCSSCSEEEECCC-TTCEEEEEECCSTTCCEEEEEETTS--EEEEEETTTTEEEEEEE
T ss_pred CCEEEEEe----CCCeEEEEECCCCCccceeccCC-cCcEEEEEEEEcCCCCEEEEEcCCC--eEEEEeCCCCccceeeC
Confidence 56665433 24679999987665223333322 23455566554 456788888887 79999999888767776
Q ss_pred cCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 448 IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 448 ~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
.+...+..+.++|+++.++ +.+ .-+++..||+.+++
T Consensus 226 ~h~~~v~~~~~~p~~~~l~-s~s---~Dg~i~iWd~~~~~ 261 (304)
T 2ynn_A 226 GHMSNVSFAVFHPTLPIII-SGS---EDGTLKIWNSSTYK 261 (304)
T ss_dssp CCSSCEEEEEECSSSSEEE-EEE---TTSCEEEEETTTCC
T ss_pred CCCCCEEEEEECCCCCEEE-EEc---CCCeEEEEECCCCc
Confidence 6667787888999988554 332 24679999998885
No 229
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.32 E-value=1.2e-10 Score=138.43 Aligned_cols=260 Identities=10% Similarity=-0.034 Sum_probs=160.3
Q ss_pred eCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEe
Q 003878 139 VSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLF 218 (789)
Q Consensus 139 ~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 218 (789)
++|||++++|.....|.+...||+++..+++... +..... .
T Consensus 75 p~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~--l~d~~~-----------------~-------------------- 115 (695)
T 2bkl_A 75 PSRRNGRFFYVRTHKDKEKAILYWRQGESGQEKV--LLDPNG-----------------W-------------------- 115 (695)
T ss_dssp CEEETTEEEEEEECTTCSSCEEEEEESTTSCCEE--EECGGG-----------------S--------------------
T ss_pred CEEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEE--EEchHH-----------------h--------------------
Confidence 5699999999998888778899999987774321 111100 0
Q ss_pred eeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCC-cEEEEecCC
Q 003878 219 SLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE-DILCWKDPE 297 (789)
Q Consensus 219 ~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~-~~~~~~~~~ 297 (789)
.+.+. | ...+++|||||+.|+|+.... .....+|+++++.++... ...+ +.
T Consensus 116 --a~~~~---~------~~~~~~~SPDG~~la~~~~~~--------------G~~~~~i~v~dl~tg~~~~~~~~---~~ 167 (695)
T 2bkl_A 116 --SKDGT---V------SLGTWAVSWDGKKVAFAQKPN--------------AADEAVLHVIDVDSGEWSKVDVI---EG 167 (695)
T ss_dssp --SSSSC---E------EEEEEEECTTSSEEEEEEEET--------------TCSCCEEEEEETTTCCBCSSCCB---SC
T ss_pred --ccCCC---E------EEEEEEECCCCCEEEEEECCC--------------CCceEEEEEEECCCCCCcCCccc---Cc
Confidence 00000 1 147899999999999997643 234568999999876532 1111 11
Q ss_pred CCeeEEEEEEecCCcEEEEEEEcCC--------CCceEEEEEECCCCCCCcccccccCCCCccEeeeccc----cceeEE
Q 003878 298 HPKYIFSGHVTEDGQYLVMCIEENC--------DPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF----DAQYEV 365 (789)
Q Consensus 298 ~~~~~~~~~~SpDG~~l~~~~~~~~--------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~----~~~~~~ 365 (789)
.. ..+++|||||+.|++.+.+.. ....+||++++.++... ...+.... ......
T Consensus 168 ~~--~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~------------~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 168 GK--YATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK------------DTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp CT--TCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG------------CEEEECCCCCTTCEEEEE
T ss_pred cc--ccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchh------------ceEEEecCCCCEEEEEEE
Confidence 11 136899999999999886542 12467999999875210 11122211 112245
Q ss_pred EecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeC-CeEEEEEEECCCCce--
Q 003878 366 IANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD-VKYVLQIRDLKNGSL-- 442 (789)
Q Consensus 366 ~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~-g~~~L~~~dl~tG~~-- 442 (789)
|||||+.|++.++.+....+|+.++..+++ ++.+.+... .. ....+.. +.+++....+ ...+|+++++++++.
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~-~~~l~~~~~-~~-~~~~~~~-g~l~~~s~~~~~~~~l~~~d~~~~~~~~ 309 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGEKD-FRLLVKGVG-AK-YEVHAWK-DRFYVLTDEGAPRQRVFEVDPAKPARAS 309 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTCSS-CEEEEECSS-CC-EEEEEET-TEEEEEECTTCTTCEEEEEBTTBCSGGG
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCCCc-eEEeecCCC-ce-EEEEecC-CcEEEEECCCCCCCEEEEEeCCCCCccC
Confidence 999999999887654346789999876665 677776553 22 3333444 4565554433 245899999987652
Q ss_pred eeecccC--CeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 443 LHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 443 ~~~l~~~--~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
.+.+..+ ...+..++++ ++.++++... ..-..++.+++.++
T Consensus 310 ~~~l~~~~~~~~l~~~~~~--~~~lv~~~~~-dg~~~l~~~~~~g~ 352 (695)
T 2bkl_A 310 WKEIVPEDSSASLLSVSIV--GGHLSLEYLK-DATSEVRVATLKGK 352 (695)
T ss_dssp CEEEECCCSSCEEEEEEEE--TTEEEEEEEE-TTEEEEEEEETTCC
T ss_pred CeEEecCCCCCeEEEEEEE--CCEEEEEEEE-CCEEEEEEEeCCCC
Confidence 1333322 4456666665 4556666543 34467888887544
No 230
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=99.31 E-value=5e-12 Score=130.25 Aligned_cols=95 Identities=14% Similarity=0.064 Sum_probs=69.3
Q ss_pred cc-EEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCC
Q 003878 538 HP-CLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 616 (789)
Q Consensus 538 ~P-~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d 616 (789)
.| .||++||..+... .|.. ....|. .+|.|+++|.||.|..... ...+++++ ++.+++. .+
T Consensus 12 g~~~vvllHG~~~~~~--~w~~-~~~~L~-~~~~vi~~Dl~G~G~S~~~---------~~~~~~~~---~~~l~~~--l~ 73 (258)
T 1m33_A 12 GNVHLVLLHGWGLNAE--VWRC-IDEELS-SHFTLHLVDLPGFGRSRGF---------GALSLADM---AEAVLQQ--AP 73 (258)
T ss_dssp CSSEEEEECCTTCCGG--GGGG-THHHHH-TTSEEEEECCTTSTTCCSC---------CCCCHHHH---HHHHHTT--SC
T ss_pred CCCeEEEECCCCCChH--HHHH-HHHHhh-cCcEEEEeeCCCCCCCCCC---------CCcCHHHH---HHHHHHH--hC
Confidence 35 8999999765543 3443 345566 7999999999998754321 12345554 3444443 33
Q ss_pred CCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCC
Q 003878 617 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 651 (789)
Q Consensus 617 ~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p 651 (789)
+++.++|||+||.+++.++.++|++++++|+..+
T Consensus 74 -~~~~lvGhS~Gg~va~~~a~~~p~~v~~lvl~~~ 107 (258)
T 1m33_A 74 -DKAIWLGWSLGGLVASQIALTHPERVRALVTVAS 107 (258)
T ss_dssp -SSEEEEEETHHHHHHHHHHHHCGGGEEEEEEESC
T ss_pred -CCeEEEEECHHHHHHHHHHHHhhHhhceEEEECC
Confidence 7899999999999999999999999999998654
No 231
>1pja_A Palmitoyl-protein thioesterase 2 precursor; hydrolase, glycoprotein, lysosome; HET: NAG; 2.70A {Homo sapiens} SCOP: c.69.1.13
Probab=99.30 E-value=1.2e-11 Score=130.44 Aligned_cols=104 Identities=17% Similarity=0.138 Sum_probs=76.7
Q ss_pred CCCccEEEEEcCCCCccCCCCCCHHHHHHHHcC--CeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHc
Q 003878 535 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHL--GAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA 612 (789)
Q Consensus 535 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~--G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~ 612 (789)
.+..|.||++||..+... .|.. ....|.++ ||.|+.+|+||.|..... ....++|+.+.+..+++.
T Consensus 33 ~~~~~~vvllHG~~~~~~--~~~~-~~~~L~~~~~g~~vi~~D~~G~G~s~~~---------~~~~~~~~~~~l~~~~~~ 100 (302)
T 1pja_A 33 RASYKPVIVVHGLFDSSY--SFRH-LLEYINETHPGTVVTVLDLFDGRESLRP---------LWEQVQGFREAVVPIMAK 100 (302)
T ss_dssp --CCCCEEEECCTTCCGG--GGHH-HHHHHHHHSTTCCEEECCSSCSGGGGSC---------HHHHHHHHHHHHHHHHHH
T ss_pred cCCCCeEEEECCCCCChh--HHHH-HHHHHHhcCCCcEEEEeccCCCccchhh---------HHHHHHHHHHHHHHHhhc
Confidence 355688999999766543 3444 34555557 999999999997642111 113567777777777766
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHHhCCC-ceeEEEecCCcc
Q 003878 613 GYTQSRKLCIEGGSNGGLLVGACINQRPD-LFGCALAHVGVM 653 (789)
Q Consensus 613 ~~~d~~~i~i~G~S~GG~l~~~~~~~~pd-~f~a~v~~~p~~ 653 (789)
. .+++.++|||+||.++..++.++|+ +++++|+..|..
T Consensus 101 ~---~~~~~lvGhS~Gg~ia~~~a~~~p~~~v~~lvl~~~~~ 139 (302)
T 1pja_A 101 A---PQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQ 139 (302)
T ss_dssp C---TTCEEEEEETHHHHHHHHHHHHCTTCCEEEEEEESCCT
T ss_pred C---CCcEEEEEECHHHHHHHHHHHhcCccccCEEEEECCCc
Confidence 4 4789999999999999999999999 799999887654
No 232
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.29 E-value=9e-10 Score=128.71 Aligned_cols=275 Identities=11% Similarity=0.072 Sum_probs=171.7
Q ss_pred EeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceee
Q 003878 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFF 214 (789)
Q Consensus 135 ~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 214 (789)
..+++||||++||++. + .++++||+.+++... .+... .+ -..+....|++
T Consensus 22 ~~~~~spdg~~l~~~~---~---~~v~l~~~~~~~~~~-~~~~h-------~~----~v~~~~~spdg------------ 71 (611)
T 1nr0_A 22 VVLGNTPAGDKIQYCN---G---TSVYTVPVGSLTDTE-IYTEH-------SH----QTTVAKTSPSG------------ 71 (611)
T ss_dssp CCCEECTTSSEEEEEE---T---TEEEEEETTCSSCCE-EECCC-------SS----CEEEEEECTTS------------
T ss_pred eEEeeCCCCCEEEeCC---C---CEEEEecCCCcccCe-EecCC-------CC----ceEEEEECCCC------------
Confidence 4567999999999874 2 279999998775432 11111 11 12223445777
Q ss_pred EEEeeeccccceeeeeeec------------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEEC
Q 003878 215 FYLFSLVKSTIYSFWSVVS------------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFL 282 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~------------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 282 (789)
+++.+++.+|+-.||.+.. .-....++|+|||+.|+...... .....|+.++.
T Consensus 72 ~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~---------------~~~~~v~~wd~ 136 (611)
T 1nr0_A 72 YYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR---------------ERFGHVFLFDT 136 (611)
T ss_dssp SEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCS---------------SCSEEEEETTT
T ss_pred cEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCC---------------CceeEEEEeeC
Confidence 4788889999999998732 11246799999999998764321 12235777765
Q ss_pred CCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce
Q 003878 283 GTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ 362 (789)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 362 (789)
+.... .+. .+...+..++|+||+++.+++... ...|.++|..++. ....+.......
T Consensus 137 ~~~~~----~l~--gh~~~v~~v~f~p~~~~~l~s~s~----D~~v~lwd~~~~~-------------~~~~l~~H~~~V 193 (611)
T 1nr0_A 137 GTSNG----NLT--GQARAMNSVDFKPSRPFRIISGSD----DNTVAIFEGPPFK-------------FKSTFGEHTKFV 193 (611)
T ss_dssp CCBCB----CCC--CCSSCEEEEEECSSSSCEEEEEET----TSCEEEEETTTBE-------------EEEEECCCSSCE
T ss_pred CCCcc----eec--CCCCCceEEEECCCCCeEEEEEeC----CCeEEEEECCCCe-------------EeeeeccccCce
Confidence 54221 112 234456789999999865444433 2347778876531 112222222222
Q ss_pred e-EEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccC-----CCCceeeeEEEecCCEEEEEEEeCCeEEEEEEE
Q 003878 363 Y-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPE-----AERDVLESATAVNLNQMIVSYLSDVKYVLQIRD 436 (789)
Q Consensus 363 ~-~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~-----~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~d 436 (789)
. ..|+|||+.|+..+. +..|.++|+.+++....+... .....+..+++++++..+++...|+ .|.+||
T Consensus 194 ~~v~fspdg~~las~s~----D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~--~v~lWd 267 (611)
T 1nr0_A 194 HSVRYNPDGSLFASTGG----DGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK--TIKIWN 267 (611)
T ss_dssp EEEEECTTSSEEEEEET----TSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS--EEEEEE
T ss_pred EEEEECCCCCEEEEEEC----CCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC--eEEEEe
Confidence 2 348999997775433 457888998877622333110 1235688999998777888888887 788899
Q ss_pred CCCCceeeecc-------------------------------------------cCCeeEEEeecccCCcEEEEEEcCCC
Q 003878 437 LKNGSLLHQLP-------------------------------------------IEIGSVNAISARREDSVVFISFTSFL 473 (789)
Q Consensus 437 l~tG~~~~~l~-------------------------------------------~~~~~v~~~s~s~d~~~l~~~~ss~~ 473 (789)
+.+++....+. .+...+..++++|+++.++-..
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s---- 343 (611)
T 1nr0_A 268 VATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSAD---- 343 (611)
T ss_dssp TTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE----
T ss_pred CCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEe----
Confidence 98776433321 1233466778889888665332
Q ss_pred CCcEEEEEECCCCC
Q 003878 474 IPGIVYQCNLKTET 487 (789)
Q Consensus 474 ~P~~ly~~dl~tg~ 487 (789)
.-.++..||+.+++
T Consensus 344 ~D~~v~~Wd~~~~~ 357 (611)
T 1nr0_A 344 AEGHINSWDISTGI 357 (611)
T ss_dssp TTSCEEEEETTTCC
T ss_pred CCCcEEEEECCCCc
Confidence 23588999998874
No 233
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold, epoxide degradation, epichlorohydrin; 2.10A {Agrobacterium tumefaciens} SCOP: c.69.1.11
Probab=99.29 E-value=7.1e-11 Score=124.46 Aligned_cols=117 Identities=16% Similarity=0.073 Sum_probs=81.9
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.+| .+|.+... +..|.||++||..+... .|.. ....|. ..|.|+++|.||.|..... . .....
T Consensus 16 ~~g-~~l~y~~~--------G~g~~lvllHG~~~~~~--~w~~-~~~~L~-~~~~via~Dl~G~G~S~~~-~---~~~~~ 78 (294)
T 1ehy_A 16 LPD-VKIHYVRE--------GAGPTLLLLHGWPGFWW--EWSK-VIGPLA-EHYDVIVPDLRGFGDSEKP-D---LNDLS 78 (294)
T ss_dssp CSS-CEEEEEEE--------ECSSEEEEECCSSCCGG--GGHH-HHHHHH-TTSEEEEECCTTSTTSCCC-C---TTCGG
T ss_pred ECC-EEEEEEEc--------CCCCEEEEECCCCcchh--hHHH-HHHHHh-hcCEEEecCCCCCCCCCCC-c---ccccc
Confidence 478 78866543 13478999999876543 4444 345566 4599999999998864321 0 00001
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCC
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 651 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p 651 (789)
..+++++.+.+..+++. ...+++.++|||+||.+++.++.++|++++++|+..+
T Consensus 79 ~~~~~~~a~dl~~ll~~--l~~~~~~lvGhS~Gg~va~~~A~~~P~~v~~lvl~~~ 132 (294)
T 1ehy_A 79 KYSLDKAADDQAALLDA--LGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDP 132 (294)
T ss_dssp GGCHHHHHHHHHHHHHH--TTCCCEEEEEETHHHHHHHHHHHHTGGGEEEEEEECC
T ss_pred CcCHHHHHHHHHHHHHH--cCCCCEEEEEeChhHHHHHHHHHhChhheeEEEEecC
Confidence 23566666666666655 2335899999999999999999999999999998875
No 234
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.28 E-value=4.1e-09 Score=121.17 Aligned_cols=288 Identities=11% Similarity=0.062 Sum_probs=165.1
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEc--CCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRI--EDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl--~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
+..+.+||||++|+.+. .. .+|++||+ ++++.+. .+..-.
T Consensus 181 ~~~v~~spdg~~l~v~~-~d----~~V~v~D~~~~t~~~~~-~i~~g~-------------------------------- 222 (543)
T 1nir_A 181 VHISRMSASGRYLLVIG-RD----ARIDMIDLWAKEPTKVA-EIKIGI-------------------------------- 222 (543)
T ss_dssp EEEEEECTTSCEEEEEE-TT----SEEEEEETTSSSCEEEE-EEECCS--------------------------------
T ss_pred cceEEECCCCCEEEEEC-CC----CeEEEEECcCCCCcEEE-EEecCC--------------------------------
Confidence 55788999999986543 22 47999999 7876543 222100
Q ss_pred eeeEEEeeeccccceeeeeeecccccceEEEEe----CCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTH----DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS 287 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wsp----Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~ 287 (789)
...+++||| ||+.+|.... .+.+|.+++..+...
T Consensus 223 ------------------------~p~~va~sp~~~~dg~~l~v~~~------------------~~~~v~v~D~~t~~~ 260 (543)
T 1nir_A 223 ------------------------EARSVESSKFKGYEDRYTIAGAY------------------WPPQFAIMDGETLEP 260 (543)
T ss_dssp ------------------------EEEEEEECCSTTCTTTEEEEEEE------------------ESSEEEEEETTTCCE
T ss_pred ------------------------CcceEEeCCCcCCCCCEEEEEEc------------------cCCeEEEEecccccc
Confidence 136889999 9999987643 234577788766432
Q ss_pred CcEEEEecCC--------C-CeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecc
Q 003878 288 EDILCWKDPE--------H-PKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG 358 (789)
Q Consensus 288 ~~~~~~~~~~--------~-~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~ 358 (789)
.. ...... + .....++.+|||++.++++... ...|+++|..+.. ......+..+
T Consensus 261 ~~--~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~----~g~i~vvd~~~~~-----------~l~~~~i~~~ 323 (543)
T 1nir_A 261 KQ--IVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKE----TGKVLLVNYKDID-----------NLTVTSIGAA 323 (543)
T ss_dssp EE--EEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETT----TTEEEEEECTTSS-----------SCEEEEEECC
T ss_pred ce--eecccCcccCccccccCCceEEEEECCCCCEEEEEECC----CCeEEEEEecCCC-----------cceeEEeccC
Confidence 22 222100 0 1134578899999988776532 4679999998742 1111111111
Q ss_pred ccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCC-CceeeeEE-EecC-CEEEEEEEeCCeEEEEEE
Q 003878 359 FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE-RDVLESAT-AVNL-NQMIVSYLSDVKYVLQIR 435 (789)
Q Consensus 359 ~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~-~~~i~~v~-~~~~-~~lv~~~~~~g~~~L~~~ 435 (789)
.......|+|||++|++..+. ...|.++|+++++ ....++-.. ...-.++. .+++ +.++++.. .+...|.+|
T Consensus 324 ~~~~~~~~spdg~~l~va~~~---~~~v~v~D~~tg~-l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~-~~d~~V~v~ 398 (543)
T 1nir_A 324 PFLHDGGWDSSHRYFMTAANN---SNKVAVIDSKDRR-LSALVDVGKTPHPGRGANFVHPKYGPVWSTSH-LGDGSISLI 398 (543)
T ss_dssp SSCCCEEECTTSCEEEEEEGG---GTEEEEEETTTTE-EEEEEECSSSBCCTTCEEEEETTTEEEEEEEB-SSSSEEEEE
T ss_pred cCccCceECCCCCEEEEEecC---CCeEEEEECCCCe-EEEeeccCCCCCCCCCcccCCCCCccEEEecc-CCCceEEEE
Confidence 111224589999988766543 3578889999876 333333110 01101222 2443 45555433 223479999
Q ss_pred ECCC-------CceeeecccCCeeEEEeecccCCcEEEEEEcCCCCC-----cEEEEEECCCCCceEEEeeeccCCCCCC
Q 003878 436 DLKN-------GSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIP-----GIVYQCNLKTETPEMKIFRETIIPGFDR 503 (789)
Q Consensus 436 dl~t-------G~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P-----~~ly~~dl~tg~~~~~~l~~~~~~~~~~ 503 (789)
+.++ ++.++.|..+.+.+..+.++|+++.+++. +...| .+|.++|..+++...+.+.-....++..
T Consensus 399 d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~--~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~ 476 (543)
T 1nir_A 399 GTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVD--TTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGE 476 (543)
T ss_dssp ECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEEC--CTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCS
T ss_pred EeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEe--cCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCC
Confidence 9987 56666776553333356789999988863 22334 4999999998864323332111111111
Q ss_pred CCCcEEEEEEecCCCceEEEEEEE
Q 003878 504 SEFHVHQVFVPSKDGSTKIPMFIV 527 (789)
Q Consensus 504 ~~~~~~~~~~~s~dg~~~i~~~l~ 527 (789)
..-.+.++.| ++|| .++-+.+.
T Consensus 477 ~~~~~~~~~~-~~~g-~~~~~s~~ 498 (543)
T 1nir_A 477 GAKRVVQPEY-NKRG-DEVWFSVW 498 (543)
T ss_dssp SCCEEEEEEE-CSSS-SEEEEEEE
T ss_pred CCCceEeccC-CCCC-CEEEEEee
Confidence 1233455555 4677 66655443
No 235
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.27 E-value=5.9e-09 Score=115.44 Aligned_cols=279 Identities=10% Similarity=0.008 Sum_probs=169.5
Q ss_pred EeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceee
Q 003878 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFF 214 (789)
Q Consensus 135 ~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 214 (789)
..+++||+ +.++++...+ .+|++||+.+++.+....... +..+.+. ..+..+.|++
T Consensus 126 ~~~~~s~~-~~~~~~~~~~----~~i~~~d~~~g~~~~~~~~~~---~~~~~~~----v~~~~~~~~~------------ 181 (433)
T 3bws_A 126 KSVRFIDN-TRLAIPLLED----EGMDVLDINSGQTVRLSPPEK---YKKKLGF----VETISIPEHN------------ 181 (433)
T ss_dssp CCCEESSS-SEEEEEBTTS----SSEEEEETTTCCEEEECCCHH---HHTTCCE----EEEEEEGGGT------------
T ss_pred eEEEEeCC-CeEEEEeCCC----CeEEEEECCCCeEeeecCccc---ccccCCc----eeEEEEcCCC------------
Confidence 36789994 4555544322 369999999997653110000 0011110 1111223444
Q ss_pred EEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC
Q 003878 215 FYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT 284 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~ 284 (789)
++++++..+|...+|.+.. ......++|+|||+.++++... ...|+++++.+
T Consensus 182 ~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~------------------~~~i~~~d~~~ 243 (433)
T 3bws_A 182 ELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWI------------------SEDISVIDRKT 243 (433)
T ss_dssp EEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETT------------------TTEEEEEETTT
T ss_pred EEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecC------------------CCcEEEEECCC
Confidence 4667777888888887644 1123578999999999877422 23688999875
Q ss_pred CCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCC---CceEEEEEECCCCCCCcccccccCCCCccEeeec-ccc
Q 003878 285 KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCD---PVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFD 360 (789)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~---~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~ 360 (789)
.. .+...+. ......+.++|||++|++....... ....|+++|+.+++ ...... ...
T Consensus 244 ~~----~~~~~~~-~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~--------------~~~~~~~~~~ 304 (433)
T 3bws_A 244 KL----EIRKTDK-IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK--------------LIDTIGPPGN 304 (433)
T ss_dssp TE----EEEECCC-CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE--------------EEEEEEEEEC
T ss_pred Cc----EEEEecC-CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc--------------EEeeccCCCC
Confidence 42 2222222 2335688999999999887653321 14679999998742 111111 111
Q ss_pred ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeC-Ce----------
Q 003878 361 AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD-VK---------- 429 (789)
Q Consensus 361 ~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~-g~---------- 429 (789)
.....|+|+|+.+++.... +..|..+|+.+++ ....++.. ..+..+++++++..++....+ ..
T Consensus 305 ~~~~~~~~~g~~l~~~~~~---~~~v~v~d~~~~~-~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~ 378 (433)
T 3bws_A 305 KRHIVSGNTENKIYVSDMC---CSKIEVYDLKEKK-VQKSIPVF--DKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGL 378 (433)
T ss_dssp EEEEEECSSTTEEEEEETT---TTEEEEEETTTTE-EEEEEECS--SSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCS
T ss_pred cceEEECCCCCEEEEEecC---CCEEEEEECCCCc-EEEEecCC--CCCCeEEEcCCCCEEEEEecCCCccccccccccc
Confidence 2234589999988877544 4689999998765 33344433 346788999865544444432 21
Q ss_pred --EEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 430 --YVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 430 --~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
..|++||+++++....+.. ...+..+.++++++.++++.. .-..++.|++.
T Consensus 379 ~dg~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~---~d~~i~v~~~~ 431 (433)
T 3bws_A 379 VLGKVYVIDTTTDTVKEFWEA-GNQPTGLDVSPDNRYLVISDF---LDHQIRVYRRD 431 (433)
T ss_dssp SCCEEEEEETTTTEEEEEEEC-SSSEEEEEECTTSCEEEEEET---TTTEEEEEEET
T ss_pred cceEEEEEECCCCcEEEEecC-CCCCceEEEcCCCCEEEEEEC---CCCeEEEEEec
Confidence 2899999988876555544 334667889999998776532 23577777764
No 236
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.27 E-value=4.4e-09 Score=113.06 Aligned_cols=210 Identities=14% Similarity=0.095 Sum_probs=111.5
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC-CcEEEEecCC-C------CeeEEEEEEe
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS-EDILCWKDPE-H------PKYIFSGHVT 308 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~-~~~~~~~~~~-~------~~~~~~~~~S 308 (789)
...++|+|||+.|++.... ...+.++++..... ..+....... . ......+.+|
T Consensus 88 p~~~a~spdg~~l~~~~~~------------------~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~s 149 (347)
T 3hfq_A 88 PAYVAVDEARQLVYSANYH------------------KGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLT 149 (347)
T ss_dssp CSEEEEETTTTEEEEEETT------------------TTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEEC
T ss_pred CEEEEECCCCCEEEEEeCC------------------CCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEEC
Confidence 4679999999999887532 23466777643221 1111111110 0 1124568999
Q ss_pred cCCcEEEEEEEcCCCCceEEEEEECC-CCCCCcccccccCCCCccEeee--ccccceeEEEecCCCEEEEEECCCCCCce
Q 003878 309 EDGQYLVMCIEENCDPVNKVYYCDLS-ALPEGLEGFKKRDGLLPFVKLI--DGFDAQYEVIANDDTVFTFLTNKDAPKYK 385 (789)
Q Consensus 309 pDG~~l~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~s~dG~~l~~~tn~~~~~~~ 385 (789)
|||+ +++.. .. ...|++++++ ++. ........ .+.......|+|||+.+|+....+ ..
T Consensus 150 pdg~-l~v~~-~~---~~~v~~~~~~~~g~-----------~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~---~~ 210 (347)
T 3hfq_A 150 PDNR-LAVID-LG---SDKVYVYNVSDAGQ-----------LSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELS---SQ 210 (347)
T ss_dssp TTSC-EEEEE-TT---TTEEEEEEECTTSC-----------EEEEEEEECCTTCCEEEEEECTTSSEEEEEETTT---TE
T ss_pred CCCc-EEEEe-CC---CCEEEEEEECCCCc-----------EEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCC---CE
Confidence 9999 55443 22 3568888887 321 00011111 111222345899999888765543 34
Q ss_pred EEEEECC--CCCCeEE---eccCCC----CceeeeEEEecCCE-EEEEEEeCCeEEEEEEECC-CCce--eeecccCCee
Q 003878 386 IIRVDLK--EPNDWFE---VIPEAE----RDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLK-NGSL--LHQLPIEIGS 452 (789)
Q Consensus 386 L~~~dl~--~~~~~~~---l~~~~~----~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl~-tG~~--~~~l~~~~~~ 452 (789)
|.+++++ +++ ++. +..... ......++++++++ +++....++ .|.+|+++ +|.. +..+......
T Consensus 211 v~v~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~--~v~v~~~~~~g~~~~~~~~~~~~~~ 287 (347)
T 3hfq_A 211 IASLKYDTQTGA-FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYN--TLAVFAVTADGHLTLIQQISTEGDF 287 (347)
T ss_dssp EEEEEEETTTTE-EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTT--EEEEEEECGGGCEEEEEEEECSSSC
T ss_pred EEEEEecCCCCc-eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCC--EEEEEEECCCCcEEEeEEEecCCCC
Confidence 5555544 343 221 111111 13466788998654 556555454 67778875 2322 2222222223
Q ss_pred EEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 453 VNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 453 v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+..++++||++.++++-.. ...-.+|.+|.++|+
T Consensus 288 ~~~~~~spdg~~l~v~~~~-~~~v~v~~~d~~tg~ 321 (347)
T 3hfq_A 288 PRDFDLDPTEAFVVVVNQN-TDNATLYARDLTSGK 321 (347)
T ss_dssp CCEEEECTTSSEEEEEETT-TTEEEEEEECTTTCC
T ss_pred cCeEEECCCCCEEEEEEcC-CCcEEEEEEeCCCCe
Confidence 4567889999987765432 233345555777785
No 237
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=99.27 E-value=7.3e-12 Score=128.77 Aligned_cols=116 Identities=13% Similarity=0.021 Sum_probs=84.5
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCc
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 596 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~ 596 (789)
+| .+|.+...-+ ...|+||++||..+.... |.. ....|. ++|.|+++|+||.|..... ...
T Consensus 7 ~g-~~l~~~~~g~------~~~~~vv~lHG~~~~~~~--~~~-~~~~L~-~~~~v~~~D~~G~G~S~~~--------~~~ 67 (264)
T 3ibt_A 7 NG-TLMTYSESGD------PHAPTLFLLSGWCQDHRL--FKN-LAPLLA-RDFHVICPDWRGHDAKQTD--------SGD 67 (264)
T ss_dssp TT-EECCEEEESC------SSSCEEEEECCTTCCGGG--GTT-HHHHHT-TTSEEEEECCTTCSTTCCC--------CSC
T ss_pred CC-eEEEEEEeCC------CCCCeEEEEcCCCCcHhH--HHH-HHHHHH-hcCcEEEEccccCCCCCCC--------ccc
Confidence 67 7776544322 235899999998766533 443 345666 6799999999998764321 233
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCceeEEEecCCcc
Q 003878 597 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVGVM 653 (789)
Q Consensus 597 ~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-pd~f~a~v~~~p~~ 653 (789)
.+++++.+.+..+++. .+.+++.++|||+||.+++.++.++ |++++++|+..|..
T Consensus 68 ~~~~~~~~~~~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~~p~~v~~lvl~~~~~ 123 (264)
T 3ibt_A 68 FDSQTLAQDLLAFIDA--KGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLL 123 (264)
T ss_dssp CCHHHHHHHHHHHHHH--TTCCSEEEEEETTHHHHHHHHHHHSCTTTSCEEEEESCCS
T ss_pred cCHHHHHHHHHHHHHh--cCCCceEEEecchhHHHHHHHHHhhChhhhheEEEecCCC
Confidence 4566776666666654 2345899999999999999999999 99999999988765
No 238
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.25 E-value=2.9e-09 Score=113.36 Aligned_cols=250 Identities=10% Similarity=0.037 Sum_probs=146.8
Q ss_pred eEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeE
Q 003878 136 KVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFF 215 (789)
Q Consensus 136 ~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 215 (789)
.+++||||++|+++....+ +|+++|+++++.....+....
T Consensus 44 ~~~~s~dg~~l~~~~~~~~----~i~~~d~~~~~~~~~~~~~~~------------------------------------ 83 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDFCQ----TLVQIETQLEPPKVVAIQEGQ------------------------------------ 83 (331)
T ss_dssp EEEECSSSCEEEEEESTTC----EEEEEECSSSSCEEEEEEECS------------------------------------
T ss_pred eEEEcCCCCEEEEEeCCCC----eEEEEECCCCceeEEecccCC------------------------------------
Confidence 8899999998776554233 899999999875211111110
Q ss_pred EEeeeccccceeeeeeecccccce-EEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEe
Q 003878 216 YLFSLVKSTIYSFWSVVSQFKFSS-IAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWK 294 (789)
Q Consensus 216 ~~~~s~~~g~~~l~~~~~~~~~~~-~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~ 294 (789)
.... ++|+|||+.|+ .... ......|+++++.+... +..+.
T Consensus 84 --------------------~~~~~~~~s~dg~~l~-~~~~---------------~~~~~~i~v~d~~~~~~--~~~~~ 125 (331)
T 3u4y_A 84 --------------------SSMADVDITPDDQFAV-TVTG---------------LNHPFNMQSYSFLKNKF--ISTIP 125 (331)
T ss_dssp --------------------SCCCCEEECTTSSEEE-ECCC---------------SSSSCEEEEEETTTTEE--EEEEE
T ss_pred --------------------CCccceEECCCCCEEE-EecC---------------CCCcccEEEEECCCCCe--EEEEE
Confidence 1244 99999999998 4211 11223799999876532 22233
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEE
Q 003878 295 DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFT 374 (789)
Q Consensus 295 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~ 374 (789)
.... ...+.|||||++|++...... ..++++++.... ... ......+..+.......|+|||+.+|
T Consensus 126 ~~~~---~~~~~~spdg~~l~~~~~~~~---~~i~~~~~~~~g-~~~-------~~~~~~~~~~~~~~~~~~spdg~~l~ 191 (331)
T 3u4y_A 126 IPYD---AVGIAISPNGNGLILIDRSSA---NTVRRFKIDADG-VLF-------DTGQEFISGGTRPFNITFTPDGNFAF 191 (331)
T ss_dssp CCTT---EEEEEECTTSSCEEEEEETTT---TEEEEEEECTTC-CEE-------EEEEEEECSSSSEEEEEECTTSSEEE
T ss_pred CCCC---ccceEECCCCCEEEEEecCCC---ceEEEEEECCCC-cEe-------ecCCccccCCCCccceEECCCCCEEE
Confidence 3222 357899999999877654322 226666665421 000 00001111122223345899999888
Q ss_pred EEECCCCCCceEEEEECCCCCCe--EEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCce--eeecc---
Q 003878 375 FLTNKDAPKYKIIRVDLKEPNDW--FEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL--LHQLP--- 447 (789)
Q Consensus 375 ~~tn~~~~~~~L~~~dl~~~~~~--~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~--~~~l~--- 447 (789)
+.... ...|..+|+++++.. ...++.. .....+.+++++..++.... +...|++||+++|+. +..+.
T Consensus 192 v~~~~---~~~v~v~d~~~~~~~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~-~~~~i~~~d~~~~~~~~~~~~~~~~ 265 (331)
T 3u4y_A 192 VANLI---GNSIGILETQNPENITLLNAVGTN--NLPGTIVVSRDGSTVYVLTE-STVDVFNFNQLSGTLSFVKSFGHGL 265 (331)
T ss_dssp EEETT---TTEEEEEECSSTTSCEEEEEEECS--SCCCCEEECTTSSEEEEECS-SEEEEEEEETTTTEEEEEEEEECCC
T ss_pred EEeCC---CCeEEEEECCCCcccceeeeccCC--CCCceEEECCCCCEEEEEEc-CCCEEEEEECCCCceeeeccccccc
Confidence 76643 367999999887630 2233332 34567888886553333322 345799999988765 11111
Q ss_pred -cC---CeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 448 -IE---IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 448 -~~---~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
.. ......+.+++|++.++++.. .-..+..||+.+.
T Consensus 266 ~~~~~~~~~~~~~~~spdg~~l~v~~~---~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 266 LIDPRPLFGANQMALNKTETKLFISAN---ISRELKVFTISGK 305 (331)
T ss_dssp CCCCGGGTTCCCEEECTTSSEEEEEET---TTTEEEEEETTSC
T ss_pred ccCCCCcccccceEECCCCCEEEEecC---CCCcEEEEEecCC
Confidence 11 111134678899998877643 3468999998765
No 239
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.25 E-value=1.1e-10 Score=128.50 Aligned_cols=291 Identities=11% Similarity=0.011 Sum_probs=171.5
Q ss_pred EEEeEEeCCCCcEEEEEEecCC------ceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccc
Q 003878 133 ALIKVSVSEDAKYLAYALSYSG------SDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFL 206 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g------~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 206 (789)
.+..++|||||+.++++.+..| +....|++||+.++..... +... .|. +- ..+..+.|++
T Consensus 14 ~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~-~~~~----~~~-~~----v~~~~~s~~~---- 79 (416)
T 2pm9_A 14 RTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKP-IASL----QVD-SK----FNDLDWSHNN---- 79 (416)
T ss_dssp ESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSC-SCCC----CCS-SC----EEEEEECSSS----
T ss_pred hcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcE-EEEE----ecC-Cc----eEEEEECCCC----
Confidence 3556889999985444444444 5667899999998853210 0000 000 00 1122334565
Q ss_pred ccccceeeEEEeeeccccceeeeeeec--------------ccccceEEEEeC-CcEEEEEEccCCCCCCCCCCCccccC
Q 003878 207 YLRGIFFFFYLFSLVKSTIYSFWSVVS--------------QFKFSSIAWTHD-SKGFFYSRYPAPKEGKDMDAGTETDS 271 (789)
Q Consensus 207 ~~~~~~~~~~~~~s~~~g~~~l~~~~~--------------~~~~~~~~wspD-g~~i~y~~~~~~~~~~~~~~~~~~~~ 271 (789)
.+++++..+|...||.+.. .-....++|+|| ++.|+....
T Consensus 80 --------~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~----------------- 134 (416)
T 2pm9_A 80 --------KIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGN----------------- 134 (416)
T ss_dssp --------SCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECS-----------------
T ss_pred --------CeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcC-----------------
Confidence 3567777888999997754 112467899999 565554322
Q ss_pred CcccEEEEEECCCCCC-----CcEEEEecCCCCeeEEEEEEecCC-cEEEEEEEcCCCCceEEEEEECCCCCCCcccccc
Q 003878 272 NLYHEFYYHFLGTKQS-----EDILCWKDPEHPKYIFSGHVTEDG-QYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 345 (789)
Q Consensus 272 ~~~~~i~~~~lg~~~~-----~~~~~~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 345 (789)
...|++|++.+... ....+.....+...+..+.|+|++ ..++.... ...|.++|+.++.
T Consensus 135 --dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~-----dg~v~iwd~~~~~-------- 199 (416)
T 2pm9_A 135 --NGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGS-----SNFASIWDLKAKK-------- 199 (416)
T ss_dssp --SSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESS-----SSCEEEEETTTTE--------
T ss_pred --CCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcC-----CCCEEEEECCCCC--------
Confidence 23478888876541 111110111223335678999995 55544322 3458899998742
Q ss_pred cCCCCccEeeecc-------ccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEec-C
Q 003878 346 RDGLLPFVKLIDG-------FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN-L 417 (789)
Q Consensus 346 ~~~~~~~~~l~~~-------~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~-~ 417 (789)
....+... .......|+|+|..+++....++....|..+|+.++......+.......+..+.+++ +
T Consensus 200 -----~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 274 (416)
T 2pm9_A 200 -----EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQD 274 (416)
T ss_dssp -----EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSC
T ss_pred -----cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCC
Confidence 11111111 1112234899985444444443333478889998753122222201235678899987 6
Q ss_pred CEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 418 NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 418 ~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+.++++...++ .|++||+.+++.+..+..+...+..+.++|++..++++.+ .-+.+..||+.+++
T Consensus 275 ~~~l~s~~~dg--~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~---~d~~i~iw~~~~~~ 339 (416)
T 2pm9_A 275 EHLLLSSGRDN--TVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPDLFACAS---FDNKIEVQTLQNLT 339 (416)
T ss_dssp SSCEEEEESSS--EEEEECSSSCCEEEEEECSSSCCCCEEECTTCTTEEEECC---SSSEEEEEESCCCC
T ss_pred CCeEEEEeCCC--CEEEeeCCCCccceeecCCCCceEEEEECCCCCCEEEEEe---cCCcEEEEEccCCC
Confidence 77888888887 6999999988876666655566667889999844444432 35789999987763
No 240
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.25 E-value=5.3e-09 Score=110.90 Aligned_cols=218 Identities=9% Similarity=0.011 Sum_probs=143.7
Q ss_pred EEeeeccccceeeeeeec---------------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEE
Q 003878 216 YLFSLVKSTIYSFWSVVS---------------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYH 280 (789)
Q Consensus 216 ~~~~s~~~g~~~l~~~~~---------------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 280 (789)
+++.+. +|...+|.+.. ......++|+||++.|+....+ ..|+++
T Consensus 65 ~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------------~~i~~~ 124 (337)
T 1gxr_A 65 HVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEA-------------------STLSIW 124 (337)
T ss_dssp EEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESS-------------------SEEEEE
T ss_pred EEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCC-------------------CcEEEE
Confidence 455555 89999998754 1123578999999998876432 358888
Q ss_pred ECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc
Q 003878 281 FLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD 360 (789)
Q Consensus 281 ~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 360 (789)
++.+........+.. +...+..+.|+|||++++....+ ..|+++|+.++. ....+.....
T Consensus 125 d~~~~~~~~~~~~~~--~~~~i~~~~~~~~~~~l~~~~~d-----g~v~~~d~~~~~-------------~~~~~~~~~~ 184 (337)
T 1gxr_A 125 DLAAPTPRIKAELTS--SAPACYALAISPDSKVCFSCCSD-----GNIAVWDLHNQT-------------LVRQFQGHTD 184 (337)
T ss_dssp ECCCC--EEEEEEEC--SSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTTE-------------EEEEECCCSS
T ss_pred ECCCCCcceeeeccc--CCCceEEEEECCCCCEEEEEeCC-----CcEEEEeCCCCc-------------eeeeeecccC
Confidence 987654322223332 23345688999999999876543 348899988742 1122211111
Q ss_pred c-eeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCC
Q 003878 361 A-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKN 439 (789)
Q Consensus 361 ~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~t 439 (789)
. ....|+|+|+.|+..+. ++.|..+|+.+++ ....+... ..+..+.+++++.+++....++ .|++|++.+
T Consensus 185 ~i~~~~~~~~~~~l~~~~~----dg~i~~~d~~~~~-~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~--~i~~~~~~~ 255 (337)
T 1gxr_A 185 GASCIDISNDGTKLWTGGL----DNTVRSWDLREGR-QLQQHDFT--SQIFSLGYCPTGEWLAVGMESS--NVEVLHVNK 255 (337)
T ss_dssp CEEEEEECTTSSEEEEEET----TSEEEEEETTTTE-EEEEEECS--SCEEEEEECTTSSEEEEEETTS--CEEEEETTS
T ss_pred ceEEEEECCCCCEEEEEec----CCcEEEEECCCCc-eEeeecCC--CceEEEEECCCCCEEEEEcCCC--cEEEEECCC
Confidence 1 22348999988886553 4679999998875 22223332 4577889988767777777776 688999986
Q ss_pred CceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 440 GSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 440 G~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
++. ..+......+..+.++++++.++... .-+.++.||+.+++
T Consensus 256 ~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~i~~~~~~~~~ 298 (337)
T 1gxr_A 256 PDK-YQLHLHESCVLSLKFAYCGKWFVSTG----KDNLLNAWRTPYGA 298 (337)
T ss_dssp SCE-EEECCCSSCEEEEEECTTSSEEEEEE----TTSEEEEEETTTCC
T ss_pred CCe-EEEcCCccceeEEEECCCCCEEEEec----CCCcEEEEECCCCe
Confidence 665 44544566678889999998766433 24689999998885
No 241
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.24 E-value=7.2e-10 Score=117.83 Aligned_cols=254 Identities=12% Similarity=-0.005 Sum_probs=149.6
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccccee
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFF 213 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 213 (789)
...+++||||++|+++.... .+|+++|+.+++.+.. +..... . ..+.
T Consensus 36 ~~~~~~s~dg~~l~v~~~~~----~~v~~~d~~~~~~~~~-~~~~~~-----------------~-~~~~---------- 82 (337)
T 1pby_B 36 PMVPMVAPGGRIAYATVNKS----ESLVKIDLVTGETLGR-IDLSTP-----------------E-ERVK---------- 82 (337)
T ss_dssp CCCEEECTTSSEEEEEETTT----TEEEEEETTTCCEEEE-EECCBT-----------------T-EEEE----------
T ss_pred ccceEEcCCCCEEEEEeCCC----CeEEEEECCCCCeEee-EEcCCc-----------------c-cccc----------
Confidence 35688999999987765433 3699999999876531 111000 0 0000
Q ss_pred eEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCC--cccEEEEEECCCCCCCcEE
Q 003878 214 FFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSN--LYHEFYYHFLGTKQSEDIL 291 (789)
Q Consensus 214 ~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~--~~~~i~~~~lg~~~~~~~~ 291 (789)
....++|+|||+.|++....... ..+.. ....|+++++.+... +.
T Consensus 83 ----------------------~~~~~~~s~dg~~l~~~~~~~~~---------~~~~~~~~~~~i~v~d~~~~~~--~~ 129 (337)
T 1pby_B 83 ----------------------SLFGAALSPDGKTLAIYESPVRL---------ELTHFEVQPTRVALYDAETLSR--RK 129 (337)
T ss_dssp ----------------------CTTCEEECTTSSEEEEEEEEEEE---------CSSCEEECCCEEEEEETTTTEE--EE
T ss_pred ----------------------cccceEECCCCCEEEEEeccccc---------ccccccccCceEEEEECCCCcE--EE
Confidence 13679999999999887421100 00011 246799999865432 22
Q ss_pred EEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCC
Q 003878 292 CWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDT 371 (789)
Q Consensus 292 ~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~ 371 (789)
.+..... ...+.|||||++|++. + ..|+++|++++. ....+..+.......|+|||+
T Consensus 130 ~~~~~~~---~~~~~~s~dg~~l~~~--~-----~~i~~~d~~~~~-------------~~~~~~~~~~~~~~~~s~dg~ 186 (337)
T 1pby_B 130 AFEAPRQ---ITMLAWARDGSKLYGL--G-----RDLHVMDPEAGT-------------LVEDKPIQSWEAETYAQPDVL 186 (337)
T ss_dssp EEECCSS---CCCEEECTTSSCEEEE--S-----SSEEEEETTTTE-------------EEEEECSTTTTTTTBCCCBCC
T ss_pred EEeCCCC---cceeEECCCCCEEEEe--C-----CeEEEEECCCCc-------------EeeeeeccccCCCceeCCCcc
Confidence 2332222 2357899999999876 1 348999998742 111111111001124688888
Q ss_pred EEEEEECCCCCC---------------------ceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeE
Q 003878 372 VFTFLTNKDAPK---------------------YKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKY 430 (789)
Q Consensus 372 ~l~~~tn~~~~~---------------------~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~ 430 (789)
.+++....+ .. ..|+.+|+++++ ...+..........++.+++++..++.. + .
T Consensus 187 ~l~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~-~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~--~ 260 (337)
T 1pby_B 187 AVWNQHESS-GVMATPFYTARKDIDPADPTAYRTGLLTMDLETGE-MAMREVRIMDVFYFSTAVNPAKTRAFGA--Y--N 260 (337)
T ss_dssp CCCCCCTTT-TEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCC-EEEEEEEECSSCEEEEEECTTSSEEEEE--E--S
T ss_pred EEeeeccCC-CceeeeeeccccccccccccccccceEEEeCCCCC-ceEeecCCCCCceeeEEECCCCCEEEEe--C--C
Confidence 776543221 11 168899998876 2221111112345678888865444444 2 4
Q ss_pred EEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 431 VLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 431 ~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
.|++||+++++....+..+. .+..+.++++++.+++. + ....++.||+.+++
T Consensus 261 ~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~--~--~~~~i~v~d~~~~~ 312 (337)
T 1pby_B 261 VLESFDLEKNASIKRVPLPH-SYYSVNVSTDGSTVWLG--G--ALGDLAAYDAETLE 312 (337)
T ss_dssp EEEEEETTTTEEEEEEECSS-CCCEEEECTTSCEEEEE--S--BSSEEEEEETTTCC
T ss_pred eEEEEECCCCcCcceecCCC-ceeeEEECCCCCEEEEE--c--CCCcEEEEECcCCc
Confidence 89999999887655555442 23467789999987765 2 25789999999886
No 242
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.24 E-value=8.9e-09 Score=108.72 Aligned_cols=264 Identities=13% Similarity=0.134 Sum_probs=167.0
Q ss_pred CceEeCCEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCc---------
Q 003878 85 APFKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGS--------- 155 (789)
Q Consensus 85 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~--------- 155 (789)
....+|+++||.... . ...||+.+..+...+.|.|-. .--+++||++|.|+....+.
T Consensus 20 ~~~~~g~~iy~~n~~-d--~~~ly~~~~dg~~~~~l~~~~-----------~~~i~~~g~~Iyy~~~~~~~~~~~~~~~~ 85 (302)
T 3s25_A 20 LFCESDGEVFFSNTN-D--NGRLYAMNIDGSNIHKLSNDT-----------AMYINADKNYVYYVRNNNQKITSQTFFSY 85 (302)
T ss_dssp CEEEETTEEEEEEGG-G--TTEEEEEETTSCSCEEEEEEE-----------EEEEEECSSEEEEEEECC------CCSSC
T ss_pred EEEEeCCEEEEEeCC-C--CceEEEEcCCCCCCEEccCCc-----------eeeEEEcCCEEEEEECCCCcccccceecc
Confidence 345789999886543 2 245999886444445554421 12368999999999765432
Q ss_pred eEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeeccc
Q 003878 156 DWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQF 235 (789)
Q Consensus 156 ~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~ 235 (789)
....|+.+++.+++... +..
T Consensus 86 n~~~Iy~i~~dg~~~~~--l~~---------------------------------------------------------- 105 (302)
T 3s25_A 86 DRNSLCRIKRNGHGSTV--LDP---------------------------------------------------------- 105 (302)
T ss_dssp CSEEEEEEETTSCCCEE--EEC----------------------------------------------------------
T ss_pred CCCeEEEEeCCCCcceE--eec----------------------------------------------------------
Confidence 25789999999885432 222
Q ss_pred ccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEE
Q 003878 236 KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLV 315 (789)
Q Consensus 236 ~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~ 315 (789)
....+|+++|+.|||+... ......|++.++..... ..+..... ..++++|++|+
T Consensus 106 -~~~~~~s~~g~~Iy~~~~~---------------~~~~~~Iy~~~~dGs~~--~~lt~~~~-------~~~~~~g~~iy 160 (302)
T 3s25_A 106 -DPCIYASLIGNYIYYLHYD---------------TQTATSLYRIRIDGEEK--KKIKNHYL-------FTCNTSDRYFY 160 (302)
T ss_dssp -SCEEEEEEETTEEEEEEES---------------SSSCEEEEEEETTSCCC--EEEESSCC-------CCSEEETTEEE
T ss_pred -CCccEEEEeCCEEEEEeec---------------CCCCceEEEEECCCCCe--EEEeCCCc-------eEeeEECCEEE
Confidence 2345789999999998521 12345699999976443 33433221 34688999999
Q ss_pred EEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 316 MCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 316 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
++.. + ...||+++++++. .+.+..+. ....+.|+|+.||+....+ .++|+++++++..
T Consensus 161 ~t~~-g---~~~Iy~~~l~g~~--------------~~~l~~~~--~~~~~~P~g~~iy~t~~~~--~~~I~~~~ldG~~ 218 (302)
T 3s25_A 161 YNNP-K---NGQLYRYDTASQS--------------EALFYDCN--CYKPVVLDDTNVYYMDVNR--DNAIVHVNINNPN 218 (302)
T ss_dssp EECT-T---TCCEEEEETTTTE--------------EEEEECSC--EEEEEEEETTEEEEEEGGG--TTEEEEECSSSCC
T ss_pred EEeC-C---CceEEEEECCCCC--------------EEEEeCCC--ccceeeecCCEEEEEEcCC--CcEEEEEECCCCC
Confidence 8754 2 4569999998742 22333321 2223568999999976543 3799999999876
Q ss_pred CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCC
Q 003878 396 DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIP 475 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P 475 (789)
.+.|+. . .+..+++.. ++|++..... ...|+.++++ |...++|.... +. +.+..++.|+++- +...
T Consensus 219 -~~~Lt~-~---~~~~~~~~g-~~Iy~~~~~~-~~~i~~~~~D-G~~r~~l~~~~--~~--~i~i~~d~Iy~td--~~~~ 284 (302)
T 3s25_A 219 -PVVLTE-A---NIEHYNVYG-SLIFYQRGGD-NPALCVVKND-GTGFKELAKGE--FC--NINVTSQYVYFTD--FVSN 284 (302)
T ss_dssp -CEECSC-S---CEEEEEEET-TEEEEEECSS-SCEEEEEETT-SCCCEEEEESC--EE--EEEECSSEEEEEE--TTTC
T ss_pred -eEEEeC-C---CcceEEECC-CEEEEEECCC-CcEEEEEECC-CCccEEeeCCc--cc--eEEEeCCEEEEEE--CCCC
Confidence 344442 2 245567665 7887654433 3789999998 65445665432 22 3345678888764 2222
Q ss_pred cEEEEEECC
Q 003878 476 GIVYQCNLK 484 (789)
Q Consensus 476 ~~ly~~dl~ 484 (789)
.+++.+++
T Consensus 285 -~i~~~~~d 292 (302)
T 3s25_A 285 -KEYCTSTQ 292 (302)
T ss_dssp -CEEEEESS
T ss_pred -eEEEEECC
Confidence 48888764
No 243
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase, luciferase, oxidoreductase; 1.40A {Renilla reniformis} PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Probab=99.24 E-value=7e-11 Score=126.21 Aligned_cols=116 Identities=12% Similarity=0.060 Sum_probs=82.1
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.+| .+|.+.. .+ .++.|.||++||..+.... |.. ....|. ..|.|+++|.||.|..... ...
T Consensus 28 ~~g-~~l~y~~---~G---~g~~~~vvllHG~~~~~~~--w~~-~~~~L~-~~~~via~Dl~GhG~S~~~-------~~~ 89 (318)
T 2psd_A 28 VLD-SFINYYD---SE---KHAENAVIFLHGNATSSYL--WRH-VVPHIE-PVARCIIPDLIGMGKSGKS-------GNG 89 (318)
T ss_dssp ETT-EEEEEEE---CC---SCTTSEEEEECCTTCCGGG--GTT-TGGGTT-TTSEEEEECCTTSTTCCCC-------TTS
T ss_pred eCC-eEEEEEE---cC---CCCCCeEEEECCCCCcHHH--HHH-HHHHhh-hcCeEEEEeCCCCCCCCCC-------CCC
Confidence 478 7775543 22 2344689999998765433 332 234455 5679999999998864321 112
Q ss_pred cchHHHHHHHHHHHHHcCCCCC-CcEEEEeeChHHHHHHHHHHhCCCceeEEEecCC
Q 003878 596 QNCFDDFISASEYLISAGYTQS-RKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 651 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~-~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p 651 (789)
..+++++.+.+..+++. .+. +++.++|||+||.+++.++.++|++++++|+..+
T Consensus 90 ~~~~~~~a~dl~~ll~~--l~~~~~~~lvGhSmGg~ia~~~A~~~P~~v~~lvl~~~ 144 (318)
T 2psd_A 90 SYRLLDHYKYLTAWFEL--LNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMES 144 (318)
T ss_dssp CCSHHHHHHHHHHHHTT--SCCCSSEEEEEEEHHHHHHHHHHHHCTTSEEEEEEEEE
T ss_pred ccCHHHHHHHHHHHHHh--cCCCCCeEEEEEChhHHHHHHHHHhChHhhheEEEecc
Confidence 24577777777777765 334 6899999999999999999999999999998654
No 244
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=99.23 E-value=2.9e-12 Score=134.18 Aligned_cols=103 Identities=14% Similarity=0.111 Sum_probs=75.0
Q ss_pred ccEEEEEcC-CCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCC
Q 003878 538 HPCLLYGYG-GFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 616 (789)
Q Consensus 538 ~P~ll~~hG-g~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d 616 (789)
.|+||++|| |... ....|.. ....|. +||.|+++|+||.|... .......+++|+.+.+..+++.- .
T Consensus 41 ~p~vv~lHG~G~~~-~~~~~~~-~~~~L~-~~~~vi~~D~~G~G~S~-------~~~~~~~~~~~~~~~l~~~l~~~--~ 108 (292)
T 3l80_A 41 NPCFVFLSGAGFFS-TADNFAN-IIDKLP-DSIGILTIDAPNSGYSP-------VSNQANVGLRDWVNAILMIFEHF--K 108 (292)
T ss_dssp SSEEEEECCSSSCC-HHHHTHH-HHTTSC-TTSEEEEECCTTSTTSC-------CCCCTTCCHHHHHHHHHHHHHHS--C
T ss_pred CCEEEEEcCCCCCc-HHHHHHH-HHHHHh-hcCeEEEEcCCCCCCCC-------CCCcccccHHHHHHHHHHHHHHh--C
Confidence 389999997 2221 1123333 345555 79999999999987543 11223456788877777777652 3
Q ss_pred CCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 617 SRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 617 ~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
.+++.++|||+||.+++.++.++|++++++|+..|.
T Consensus 109 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 144 (292)
T 3l80_A 109 FQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPT 144 (292)
T ss_dssp CSEEEEEEETTHHHHHHHHHHHCSSEEEEEEEESCC
T ss_pred CCCeEEEEEchhHHHHHHHHHhCchheeeEEEECCC
Confidence 358999999999999999999999999999998843
No 245
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.22 E-value=1.3e-09 Score=125.73 Aligned_cols=264 Identities=13% Similarity=0.086 Sum_probs=166.1
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
..+..+++||||++|+.+.. ..+|++||+.++.... +... .+- ..+....|+++
T Consensus 304 ~~v~~~~~~~~~~~l~t~~~-----d~~i~~w~~~~~~~~~--~~~~-------~~~----v~~~~~s~~g~-------- 357 (577)
T 2ymu_A 304 SSVWGVAFSPDGQTIASASD-----DKTVKLWNRNGQHLQT--LTGH-------SSS----VWGVAFSPDGQ-------- 357 (577)
T ss_dssp SCEEEEEECTTSSEEEEEET-----TSCEEEEETTSCEEEE--ECCC-------SSC----EEEEEECTTSS--------
T ss_pred CCeEEEEECCCCCEEEEEeC-----CCeEEEEeCCCCeeEE--EeCC-------CCC----EEEEEECCCCC--------
Confidence 34677899999999985432 2369999987764332 1110 000 01122345653
Q ss_pred eeeEEEeeeccccceeeeeeec---------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEEC
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVS---------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFL 282 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~---------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 282 (789)
.+.++..+|...+|.... ......++|+|||+.|+....+ ..|++++.
T Consensus 358 ----~l~~~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d-------------------~~v~~~~~ 414 (577)
T 2ymu_A 358 ----TIASASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDD-------------------KTVKLWNR 414 (577)
T ss_dssp ----EEEEEETTSEEEEEETTCCEEEEEECCSSCEEEEEECTTSSCEEEEETT-------------------SEEEEECT
T ss_pred ----EEEEEeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCCCCEEEEEeCC-------------------CEEEEEeC
Confidence 566777888888887543 2224578999999998866432 34777775
Q ss_pred CCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce
Q 003878 283 GTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ 362 (789)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 362 (789)
.. +....+.. +...+..+++|||+++|+.... ...|.+++.... ....+.......
T Consensus 415 ~~---~~~~~~~~--~~~~v~~~~~s~d~~~l~~~~~-----d~~v~~w~~~~~--------------~~~~~~~~~~~v 470 (577)
T 2ymu_A 415 NG---QLLQTLTG--HSSSVWGVAFSPDDQTIASASD-----DKTVKLWNRNGQ--------------LLQTLTGHSSSV 470 (577)
T ss_dssp TC---CEEEEEEC--CSSCEEEEEECTTSSEEEEEET-----TSEEEEEETTSC--------------EEEEEECCSSCE
T ss_pred CC---CEEEEecC--CCCCeEEEEECCCCCEEEEEcC-----CCEEEEEECCCC--------------EEEEEcCCCCCE
Confidence 32 21222232 2334668899999999987653 245788886541 122222222222
Q ss_pred -eEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCc
Q 003878 363 -YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGS 441 (789)
Q Consensus 363 -~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~ 441 (789)
-..|+|||+.|+..+. +..|..++..+.. .+.+..+. ..+..+++++++.++++...++ .|++||.. |+
T Consensus 471 ~~~~~spd~~~las~~~----d~~i~iw~~~~~~-~~~~~~h~--~~v~~l~~s~dg~~l~s~~~dg--~v~lwd~~-~~ 540 (577)
T 2ymu_A 471 RGVAFSPDGQTIASASD----DKTVKLWNRNGQL-LQTLTGHS--SSVRGVAFSPDGQTIASASDDK--TVKLWNRN-GQ 540 (577)
T ss_dssp EEEEECTTSCEEEEEET----TSEEEEEETTSCE-EEEEECCS--SCEEEEEECTTSSCEEEEETTS--EEEEECTT-SC
T ss_pred EEEEEcCCCCEEEEEeC----CCEEEEEcCCCCE-EEEEeCCC--CCEEEEEEcCCCCEEEEEECcC--EEEEEeCC-CC
Confidence 2348999998775443 3578888965432 44554444 5678899998778888888887 68899975 77
Q ss_pred eeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEE
Q 003878 442 LLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCN 482 (789)
Q Consensus 442 ~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~d 482 (789)
.+..+..+.+.|..+.++||++.|+ +.+. -..+..||
T Consensus 541 ~~~~~~~h~~~v~~~~fs~dg~~l~-s~~~---D~~i~~Wd 577 (577)
T 2ymu_A 541 LLQTLTGHSSSVWGVAFSPDGQTIA-SASS---DKTVKLWN 577 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEE-EEET---TSCEEEEC
T ss_pred EEEEEcCCCCCEEEEEEcCCCCEEE-EEeC---CCEEEEeC
Confidence 6667766677788899999998665 3322 23455554
No 246
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.22 E-value=3.4e-09 Score=112.86 Aligned_cols=203 Identities=13% Similarity=0.079 Sum_probs=123.3
Q ss_pred eEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEE
Q 003878 239 SIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCI 318 (789)
Q Consensus 239 ~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~ 318 (789)
.++|+|||+.++++... ..+|+++++.+.... .........+. ..+.+||||++|+ ..
T Consensus 44 ~~~~s~dg~~l~~~~~~------------------~~~i~~~d~~~~~~~-~~~~~~~~~~~--~~~~~s~dg~~l~-~~ 101 (331)
T 3u4y_A 44 DTAITSDCSNVVVTSDF------------------CQTLVQIETQLEPPK-VVAIQEGQSSM--ADVDITPDDQFAV-TV 101 (331)
T ss_dssp EEEECSSSCEEEEEEST------------------TCEEEEEECSSSSCE-EEEEEECSSCC--CCEEECTTSSEEE-EC
T ss_pred eEEEcCCCCEEEEEeCC------------------CCeEEEEECCCCcee-EEecccCCCCc--cceEECCCCCEEE-Ee
Confidence 89999999988877432 236899998765431 22223222232 1278999999998 33
Q ss_pred EcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCe-
Q 003878 319 EENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW- 397 (789)
Q Consensus 319 ~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~- 397 (789)
. .......|+++|++++. ....+..+.......|+|||+++|+....+ . ..|..++++.....
T Consensus 102 ~-~~~~~~~i~v~d~~~~~-------------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~-~-~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 102 T-GLNHPFNMQSYSFLKNK-------------FISTIPIPYDAVGIAISPNGNGLILIDRSS-A-NTVRRFKIDADGVLF 165 (331)
T ss_dssp C-CSSSSCEEEEEETTTTE-------------EEEEEECCTTEEEEEECTTSSCEEEEEETT-T-TEEEEEEECTTCCEE
T ss_pred c-CCCCcccEEEEECCCCC-------------eEEEEECCCCccceEECCCCCEEEEEecCC-C-ceEEEEEECCCCcEe
Confidence 2 22112379999998742 112222222223355999999888765432 2 22555555443211
Q ss_pred ---EEeccCCCCceeeeEEEecCCE-EEEEEEeCCeEEEEEEECCCCce---eeecccCCeeEEEeecccCCcEEEEEEc
Q 003878 398 ---FEVIPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGSL---LHQLPIEIGSVNAISARREDSVVFISFT 470 (789)
Q Consensus 398 ---~~l~~~~~~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl~tG~~---~~~l~~~~~~v~~~s~s~d~~~l~~~~s 470 (789)
..+++.. .....+.+++++. +++....++ .|.+||+++++. ...+..+ ..+..+.++||++.++++..
T Consensus 166 ~~~~~~~~~~--~~~~~~~~spdg~~l~v~~~~~~--~v~v~d~~~~~~~~~~~~~~~~-~~~~~~~~spdg~~l~v~~~ 240 (331)
T 3u4y_A 166 DTGQEFISGG--TRPFNITFTPDGNFAFVANLIGN--SIGILETQNPENITLLNAVGTN-NLPGTIVVSRDGSTVYVLTE 240 (331)
T ss_dssp EEEEEEECSS--SSEEEEEECTTSSEEEEEETTTT--EEEEEECSSTTSCEEEEEEECS-SCCCCEEECTTSSEEEEECS
T ss_pred ecCCccccCC--CCccceEECCCCCEEEEEeCCCC--eEEEEECCCCcccceeeeccCC-CCCceEEECCCCCEEEEEEc
Confidence 2233332 3357788888654 665554443 799999988876 4555433 23345678999998876543
Q ss_pred CCCCCcEEEEEECCCCC
Q 003878 471 SFLIPGIVYQCNLKTET 487 (789)
Q Consensus 471 s~~~P~~ly~~dl~tg~ 487 (789)
....++.+|+.+++
T Consensus 241 ---~~~~i~~~d~~~~~ 254 (331)
T 3u4y_A 241 ---STVDVFNFNQLSGT 254 (331)
T ss_dssp ---SEEEEEEEETTTTE
T ss_pred ---CCCEEEEEECCCCc
Confidence 45679999999884
No 247
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.22 E-value=5.2e-09 Score=114.99 Aligned_cols=200 Identities=14% Similarity=0.012 Sum_probs=122.7
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|+|||+.|+....+ ..|++|++.+.. .+..+.. +...+..+.|+|||++|+.
T Consensus 126 v~~v~~s~dg~~l~s~~~d-------------------~~i~iwd~~~~~--~~~~~~~--h~~~v~~~~~~p~~~~l~s 182 (393)
T 1erj_A 126 IRSVCFSPDGKFLATGAED-------------------RLIRIWDIENRK--IVMILQG--HEQDIYSLDYFPSGDKLVS 182 (393)
T ss_dssp EEEEEECTTSSEEEEEETT-------------------SCEEEEETTTTE--EEEEECC--CSSCEEEEEECTTSSEEEE
T ss_pred EEEEEECCCCCEEEEEcCC-------------------CeEEEEECCCCc--EEEEEcc--CCCCEEEEEEcCCCCEEEE
Confidence 3679999999999866433 348888987542 2233333 3344678999999999876
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEec-CCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~-dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
.+. ...|.++|+.++. ....+..........++| +|+.|+..+. +..|..+|+.++.
T Consensus 183 ~s~-----d~~v~iwd~~~~~-------------~~~~~~~~~~v~~~~~~~~~~~~l~~~s~----d~~v~iwd~~~~~ 240 (393)
T 1erj_A 183 GSG-----DRTVRIWDLRTGQ-------------CSLTLSIEDGVTTVAVSPGDGKYIAAGSL----DRAVRVWDSETGF 240 (393)
T ss_dssp EET-----TSEEEEEETTTTE-------------EEEEEECSSCEEEEEECSTTCCEEEEEET----TSCEEEEETTTCC
T ss_pred ecC-----CCcEEEEECCCCe-------------eEEEEEcCCCcEEEEEECCCCCEEEEEcC----CCcEEEEECCCCc
Confidence 543 3458889998742 111111111112234788 7777765443 3568888988765
Q ss_pred CeEEecc-----CCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCcee------------eecccCCeeEEEeec
Q 003878 396 DWFEVIP-----EAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLL------------HQLPIEIGSVNAISA 458 (789)
Q Consensus 396 ~~~~l~~-----~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~------------~~l~~~~~~v~~~s~ 458 (789)
....+.. ......+..+.+++++.++++...++ .|.+||+.++... ..+..+...+..+.+
T Consensus 241 ~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~--~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 318 (393)
T 1erj_A 241 LVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDR--SVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVAT 318 (393)
T ss_dssp EEEEEC------CCCSSCEEEEEECTTSSEEEEEETTS--EEEEEEC---------------CEEEEEECCSSCEEEEEE
T ss_pred EEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCC--EEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEE
Confidence 2222211 11224678899998777888888887 6888998654321 112222344667788
Q ss_pred ccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 459 RREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 459 s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
++++..++. .+ .-..++.||+.+++
T Consensus 319 ~~~~~~l~s-gs---~D~~v~iwd~~~~~ 343 (393)
T 1erj_A 319 TQNDEYILS-GS---KDRGVLFWDKKSGN 343 (393)
T ss_dssp CGGGCEEEE-EE---TTSEEEEEETTTCC
T ss_pred CCCCCEEEE-Ee---CCCeEEEEECCCCe
Confidence 888876553 22 34689999998885
No 248
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.21 E-value=2.2e-09 Score=128.41 Aligned_cols=265 Identities=12% Similarity=0.035 Sum_probs=161.3
Q ss_pred eEeCCEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCc---------eE
Q 003878 87 FKRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGS---------DW 157 (789)
Q Consensus 87 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~---------~~ 157 (789)
.++|.++.|...+++.....||+.+..+++... +. + ....+.+++|||| +.|+|+....+. ..
T Consensus 171 SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~--~~--~---~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 171 SDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLA--DE--L---KWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp CTTSSEEEEEEEETTCSEEEEEEEETTTCCEEE--EE--E---EEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred CCCCCEEEEEEcCCCCceEEEEEEECCCCCCCC--cc--C---CCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 358999999988877777789999876555321 11 0 0012357889999 999998854331 14
Q ss_pred EEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeeccccc
Q 003878 158 ATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKF 237 (789)
Q Consensus 158 ~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~ 237 (789)
.+|+++++.|+......+... ++.. ...
T Consensus 243 ~~v~~~~lgt~~~~~~lv~~~---------------------~~~~-------------------------------~~~ 270 (741)
T 1yr2_A 243 QTVWLHRLGTPQSADQPVFAT---------------------PELP-------------------------------KRG 270 (741)
T ss_dssp CEEEEEETTSCGGGCEEEECC---------------------TTCT-------------------------------TCE
T ss_pred CEEEEEECCCCchhCEEEecc---------------------CCCC-------------------------------eEE
Confidence 579999998875321111100 0000 013
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCC-cEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE-DILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
.++.|||||+.|++..... .....+||++++.++..+ ...+....+ .. ..+ ++|||++|++
T Consensus 271 ~~~~~SpDG~~l~~~~~~~--------------~~~~~~l~~~d~~~~~~~~~~~l~~~~~-~~--~~~-~~~dg~~l~~ 332 (741)
T 1yr2_A 271 HGASVSSDGRWVVITSSEG--------------TDPVNTVHVARVTNGKIGPVTALIPDLK-AQ--WDF-VDGVGDQLWF 332 (741)
T ss_dssp EEEEECTTSCEEEEEEECT--------------TCSCCEEEEEEEETTEECCCEEEECSSS-SC--EEE-EEEETTEEEE
T ss_pred EEEEECCCCCEEEEEEEcc--------------CCCcceEEEEECCCCCCcccEEecCCCC-ce--EEE-EeccCCEEEE
Confidence 5789999999999987542 113457999998765223 334443322 22 122 4699999999
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND 396 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~ 396 (789)
.++.. .....|+++|++++. ..+..++.+.......++..++.+++....+ ...+|+.+++++..
T Consensus 333 ~s~~~-~~~~~l~~~d~~~~~------------~~~~~l~~~~~~~l~~~~~~~~~lv~~~~~d-g~~~l~~~~~~g~~- 397 (741)
T 1yr2_A 333 VSGDG-APLKKIVRVDLSGST------------PRFDTVVPESKDNLESVGIAGNRLFASYIHD-AKSQVLAFDLDGKP- 397 (741)
T ss_dssp EECTT-CTTCEEEEEECSSSS------------CEEEEEECCCSSEEEEEEEEBTEEEEEEEET-TEEEEEEEETTSCE-
T ss_pred EECCC-CCCCEEEEEeCCCCc------------cccEEEecCCCCeEEEEEEECCEEEEEEEEC-CEEEEEEEeCCCCc-
Confidence 87653 235789999987631 1134444433222222333467777776654 45789999986543
Q ss_pred eEEeccCCCCceeeeEEEecC-CEEEEEEEeCC-eEEEEEEECCCCceeeec
Q 003878 397 WFEVIPEAERDVLESATAVNL-NQMIVSYLSDV-KYVLQIRDLKNGSLLHQL 446 (789)
Q Consensus 397 ~~~l~~~~~~~~i~~v~~~~~-~~lv~~~~~~g-~~~L~~~dl~tG~~~~~l 446 (789)
.+.+..+. ...+..++++++ +.+++.+.... ...|+++|+++|+. +.+
T Consensus 398 ~~~l~~~~-~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~-~~l 447 (741)
T 1yr2_A 398 AGAVSLPG-IGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT-TPW 447 (741)
T ss_dssp EEECBCSS-SCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE-EEC
T ss_pred eeeccCCC-CeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE-EEE
Confidence 34443222 355677777764 45776666544 45899999987764 444
No 249
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.21 E-value=1.8e-09 Score=130.13 Aligned_cols=272 Identities=10% Similarity=0.003 Sum_probs=173.6
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccce
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIF 212 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 212 (789)
.+..++|||||++||.+.. . ..|++||+.+++.+. .+... .+ -..+..+.|+++
T Consensus 15 ~v~~i~~sp~~~~la~~~~-~----g~v~iwd~~~~~~~~-~~~~~-------~~----~v~~~~~s~~~~--------- 68 (814)
T 3mkq_A 15 RVKGIDFHPTEPWVLTTLY-S----GRVEIWNYETQVEVR-SIQVT-------ET----PVRAGKFIARKN--------- 68 (814)
T ss_dssp CEEEEEECSSSSEEEEEET-T----SEEEEEETTTTEEEE-EEECC-------SS----CEEEEEEEGGGT---------
T ss_pred ceEEEEECCCCCEEEEEeC-C----CEEEEEECCCCceEE-EEecC-------CC----cEEEEEEeCCCC---------
Confidence 4788999999999997653 2 379999999986543 12111 01 012334446663
Q ss_pred eeEEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEEC
Q 003878 213 FFFYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFL 282 (789)
Q Consensus 213 ~~~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 282 (789)
.++++..+|...+|.+.. .-....++|+|||+.|+....+ ..|.+|++
T Consensus 69 ---~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------------------g~i~vw~~ 126 (814)
T 3mkq_A 69 ---WIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDD-------------------LTVKLWNW 126 (814)
T ss_dssp ---EEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETT-------------------SEEEEEEG
T ss_pred ---EEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCC-------------------CEEEEEEC
Confidence 566677789999998654 1224678999999998866432 35888888
Q ss_pred CCCCCCcEEEEecCCCCeeEEEEEEec-CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecc--c
Q 003878 283 GTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG--F 359 (789)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~--~ 359 (789)
.+... ....+.. +...+..+.|+| ||+.++.... ...|+++|+.++. +...+... .
T Consensus 127 ~~~~~-~~~~~~~--~~~~v~~~~~~p~~~~~l~~~~~-----dg~v~vwd~~~~~-------------~~~~~~~~~~~ 185 (814)
T 3mkq_A 127 ENNWA-LEQTFEG--HEHFVMCVAFNPKDPSTFASGCL-----DRTVKVWSLGQST-------------PNFTLTTGQER 185 (814)
T ss_dssp GGTSE-EEEEEEC--CSSCEEEEEEETTEEEEEEEEET-----TSEEEEEETTCSS-------------CSEEEECCCTT
T ss_pred CCCce-EEEEEcC--CCCcEEEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCc-------------ceeEEecCCCC
Confidence 65422 1223332 234467899999 7877776553 3458999987642 11222221 1
Q ss_pred cceeEEEec--CCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEEC
Q 003878 360 DAQYEVIAN--DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDL 437 (789)
Q Consensus 360 ~~~~~~~s~--dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl 437 (789)
......|+| +|..++..+ .++.|..+|+.+++....+..+. ..+..+.+++++.++++...++ .|++||+
T Consensus 186 ~v~~~~~~~~~~~~~l~~~~----~dg~i~~~d~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~~~~~dg--~v~vwd~ 257 (814)
T 3mkq_A 186 GVNYVDYYPLPDKPYMITAS----DDLTIKIWDYQTKSCVATLEGHM--SNVSFAVFHPTLPIIISGSEDG--TLKIWNS 257 (814)
T ss_dssp CCCEEEECCSTTCCEEEEEC----TTSEEEEEETTTTEEEEEEECCS--SCEEEEEECSSSSEEEEEETTS--CEEEEET
T ss_pred CEEEEEEEECCCCCEEEEEe----CCCEEEEEECCCCcEEEEEcCCC--CCEEEEEEcCCCCEEEEEeCCC--eEEEEEC
Confidence 223345787 888776543 24689999998775333333333 5678899998777888888776 6889999
Q ss_pred CCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 438 KNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 438 ~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
.+++....+..+...+..+++++++..+++...+ ...+..+++.
T Consensus 258 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 301 (814)
T 3mkq_A 258 STYKVEKTLNVGLERSWCIATHPTGRKNYIASGF---DNGFTVLSLG 301 (814)
T ss_dssp TTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEE---TTEEEEEECS
T ss_pred CCCcEEEEeecCCCcEEEEEEccCCCceEEEEEe---CCCEEEEEcC
Confidence 9888766666666667778888888754333222 2244555544
No 250
>1thg_A Lipase; hydrolase(carboxylic esterase); HET: NAG NDG; 1.80A {Galactomyces geotrichum} SCOP: c.69.1.17
Probab=99.20 E-value=1.1e-11 Score=141.97 Aligned_cols=231 Identities=18% Similarity=0.205 Sum_probs=136.3
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC-CCCCHHH--H-HHHHcCCeEEEEEeecCCCCCChhHHhcc
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT-PSFSVSR--T-ILMRHLGAVFCIANIRGGGEYGEEWHKGG 590 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~-~~~~~~~--~-~~l~~~G~~v~~~~~RG~g~~g~~~~~~~ 590 (789)
+.|. +.+.++.|++...+++.|+||++|||...... ..+.... . .+....|++|+.+|||.+. +| |....
T Consensus 102 sedc---l~l~v~~P~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~l~~~~l~~~~~~vvv~~nYRl~~-~g--f~~~~ 175 (544)
T 1thg_A 102 NEDC---LYLNVFRPAGTKPDAKLPVMVWIYGGAFVYGSSAAYPGNSYVKESINMGQPVVFVSINYRTGP-FG--FLGGD 175 (544)
T ss_dssp CSCC---CEEEEEEETTCCTTCCEEEEEEECCCTTCCSGGGGCCSHHHHHHHHHTTCCCEEEEECCCCHH-HH--HCCSH
T ss_pred CCCC---eEEEEEeCCCCCCCCCCcEEEEECCCccccCCccccCchHHHHHHhhcCCCEEEEeCCCCCCc-cc--CCCcc
Confidence 4566 44566788765445789999999998544332 2333211 1 1222358999999999864 11 11000
Q ss_pred ---cccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC--------CCceeEEEecCCccccc
Q 003878 591 ---ALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR--------PDLFGCALAHVGVMDML 656 (789)
Q Consensus 591 ---~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~--------pd~f~a~v~~~p~~d~~ 656 (789)
....+...+.|.++|++|+.++- ..||+||.|+|+|+||.+++.++... +.+|+++|+++|.....
T Consensus 176 ~~~~~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~ 255 (544)
T 1thg_A 176 AITAEGNTNAGLHDQRKGLEWVSDNIANFGGDPDKVMIFGESAGAMSVAHQLIAYGGDNTYNGKKLFHSAILQSGGPLPY 255 (544)
T ss_dssp HHHHHTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGTCCEETTEESCSEEEEESCCCCCC
T ss_pred cccccCCCchhHHHHHHHHHHHHHHHHHhCCChhHeEEEEECHHHHHHHHHHhCCCccccccccccccceEEeccccccc
Confidence 01233446899999999998762 36999999999999999998877752 46899999999854221
Q ss_pred ccccc-cCCc---cchhhcCCCCc---HHHHHHHHhcCcccCCCCCCC-CCCCCCCCCCe-EEEEecCCCCCCCcHHHHH
Q 003878 657 RYHKF-TIGH---AWVSDFGCSEE---EEEFYWLIKYSPLHNVRRPWE-QNPDKPFQYPS-TLLLTADHDDRVVPLHSLK 727 (789)
Q Consensus 657 ~~~~~-~~~~---~~~~e~g~p~~---~~~~~~l~~~sP~~~v~~~~~-~~~~~~~~~pp-~Li~~g~~D~~V~~~~~~~ 727 (789)
..... .... ......|++.. .+..+.|++.++...+..... .... ....++ .+.....-|..+.+.++.+
T Consensus 256 ~~~~~~~~~~~~~~~~~~~gc~~~~~~~~~~~cLr~~~~~~l~~~~~~~~~~~-~~~~~~~~~~f~P~~Dg~~l~~~p~~ 334 (544)
T 1thg_A 256 HDSSSVGPDISYNRFAQYAGCDTSASANDTLECLRSKSSSVLHDAQNSYDLKD-LFGLLPQFLGFGPRPDGNIIPDAAYE 334 (544)
T ss_dssp SSSCCSSSSCHHHHHHHHHTCCTTSCHHHHHHHHHHSCHHHHHHHHHHHHHHH-STTTSCGGGTSCCCCCSSSSCSCHHH
T ss_pred CcCChHHHHHHHHHHHHHhCCCCCCCcHHHHHHHhcCCHHHHHHhhhhccccc-ccccccccccceeeeCCcccCcCHHH
Confidence 11110 1111 11233566532 145566776654332211000 0000 000010 1112334577777788877
Q ss_pred HHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCC
Q 003878 728 LLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVG 762 (789)
Q Consensus 728 ~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~ 762 (789)
+.++.+.. ++|+.+-...++||.+.
T Consensus 335 ~~~~g~~~----------~vp~l~G~~~~Eg~~f~ 359 (544)
T 1thg_A 335 LFRSGRYA----------KVPYISGNQEDEGTAFA 359 (544)
T ss_dssp HHHTTCSC----------CCCEEEEEETBTTTTTG
T ss_pred HHhcCCCC----------CccEEEEeecCchhhhc
Confidence 76655444 88999999999999875
No 251
>3qmv_A Thioesterase, REDJ; alpha/beta hydrolase fold, hydrolase; 2.12A {Streptomyces coelicolor} PDB: 3qmw_A*
Probab=99.20 E-value=1.9e-11 Score=127.73 Aligned_cols=187 Identities=12% Similarity=-0.028 Sum_probs=107.8
Q ss_pred cEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCCC
Q 003878 539 PCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQSR 618 (789)
Q Consensus 539 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~ 618 (789)
|.||++||..+.... |.. +...|. .||.|+.+|+||.|... ......+++++.+.+..+++.- ...+
T Consensus 52 ~~lvllHG~~~~~~~--~~~-l~~~L~-~~~~v~~~D~~G~G~S~--------~~~~~~~~~~~a~~~~~~l~~~-~~~~ 118 (280)
T 3qmv_A 52 LRLVCFPYAGGTVSA--FRG-WQERLG-DEVAVVPVQLPGRGLRL--------RERPYDTMEPLAEAVADALEEH-RLTH 118 (280)
T ss_dssp EEEEEECCTTCCGGG--GTT-HHHHHC-TTEEEEECCCTTSGGGT--------TSCCCCSHHHHHHHHHHHHHHT-TCSS
T ss_pred ceEEEECCCCCChHH--HHH-HHHhcC-CCceEEEEeCCCCCCCC--------CCCCCCCHHHHHHHHHHHHHHh-CCCC
Confidence 889999997765433 443 456676 59999999999976431 1122345666655555555431 1346
Q ss_pred cEEEEeeChHHHHHHHHHHhCCCcee----EEEecCCccccc-ccccc-cCC-cc---chhhcC-CCC----c-------
Q 003878 619 KLCIEGGSNGGLLVGACINQRPDLFG----CALAHVGVMDML-RYHKF-TIG-HA---WVSDFG-CSE----E------- 676 (789)
Q Consensus 619 ~i~i~G~S~GG~l~~~~~~~~pd~f~----a~v~~~p~~d~~-~~~~~-~~~-~~---~~~e~g-~p~----~------- 676 (789)
++.++|+|+||.+++.++.++|++.. .+++..+..... ..... ... .. +...++ .+. +
T Consensus 119 ~~~lvG~S~Gg~va~~~a~~~p~~~~~~~~~l~l~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (280)
T 3qmv_A 119 DYALFGHSMGALLAYEVACVLRRRGAPRPRHLFVSGSRAPHLYGDRADHTLSDTALREVIRDLGGLDDADTLGAAYFDRR 198 (280)
T ss_dssp SEEEEEETHHHHHHHHHHHHHHHTTCCCCSCEEEESCCCGGGCSCCCGGGSCHHHHHHHHHHHTCCC---------CCTT
T ss_pred CEEEEEeCHhHHHHHHHHHHHHHcCCCCceEEEEECCCCCCCcCcccccccCHHHHHHHHHHhCCCChhhhcCHHHHHHH
Confidence 89999999999999999999887765 444433221111 00000 000 00 001111 110 0
Q ss_pred ----HHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEE
Q 003878 677 ----EEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGR 752 (789)
Q Consensus 677 ----~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~ 752 (789)
...+..+..+.+. ....+ ..|+|+++|++|..+++..+.++.+.+ ...+.+.
T Consensus 199 ~~~~~~~~~~~~~~~~~-~~~~i----------~~P~l~i~G~~D~~~~~~~~~~~~~~~-------------~~~~~~~ 254 (280)
T 3qmv_A 199 LPVLRADLRACERYDWH-PRPPL----------DCPTTAFSAAADPIATPEMVEAWRPYT-------------TGSFLRR 254 (280)
T ss_dssp HHHHHHHHHHHHTCCCC-CCCCB----------CSCEEEEEEEECSSSCHHHHHTTGGGB-------------SSCEEEE
T ss_pred HHHHHHHHHHHHhcccc-CCCce----------ecCeEEEEecCCCCcChHHHHHHHHhc-------------CCceEEE
Confidence 0112223333321 12333 689999999999999987766554332 3346777
Q ss_pred EeCCCCcCCCC
Q 003878 753 IERKAGHGVGL 763 (789)
Q Consensus 753 ~~~~~gH~~~~ 763 (789)
+++ +||....
T Consensus 255 ~~~-ggH~~~~ 264 (280)
T 3qmv_A 255 HLP-GNHFFLN 264 (280)
T ss_dssp EEE-EETTGGG
T ss_pred Eec-CCCeEEc
Confidence 776 4998654
No 252
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.20 E-value=6.2e-09 Score=116.51 Aligned_cols=248 Identities=11% Similarity=0.103 Sum_probs=153.9
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcC--CCceecccccccccccccCccceeeeeecccccccccccccccc
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIE--DQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRG 210 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~--tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 210 (789)
.+..++|||||++|+++....| .|++||+. +++.+. .+.... + +.
T Consensus 104 ~v~~~~~s~d~~~l~~~~~~dg----~v~iwd~~~~~~~~~~-~~~~~~----~---------------~~--------- 150 (450)
T 2vdu_B 104 YIRNLRLTSDESRLIACADSDK----SLLVFDVDKTSKNVLK-LRKRFC----F---------------SK--------- 150 (450)
T ss_dssp CEEEEEECTTSSEEEEEEGGGT----EEEEEEECSSSSSCEE-EEEEEE----C---------------SS---------
T ss_pred ceEEEEEcCCCCEEEEEECCCC----eEEEEECcCCCCceee-eeeccc----C---------------CC---------
Confidence 4788999999999866554434 79999998 775443 111100 0 00
Q ss_pred ceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCc-
Q 003878 211 IFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED- 289 (789)
Q Consensus 211 ~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~- 289 (789)
....++|+|||+.|+.... ...++.+++.+.....
T Consensus 151 -------------------------~v~~~~~sp~~~~l~~~~~-------------------~g~v~~~~~~~~~~~~~ 186 (450)
T 2vdu_B 151 -------------------------RPNAISIAEDDTTVIIADK-------------------FGDVYSIDINSIPEEKF 186 (450)
T ss_dssp -------------------------CEEEEEECTTSSEEEEEET-------------------TSEEEEEETTSCCCSSC
T ss_pred -------------------------CceEEEEcCCCCEEEEEeC-------------------CCcEEEEecCCcccccc
Confidence 2468999999999987643 2357888876554321
Q ss_pred -EEEEecCCCCeeEEEEEEecC---CcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-ccccc-ee
Q 003878 290 -ILCWKDPEHPKYIFSGHVTED---GQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFDA-QY 363 (789)
Q Consensus 290 -~~~~~~~~~~~~~~~~~~SpD---G~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~~~~~-~~ 363 (789)
...+.. +...+..+.|+|| |++|+....+ ..|+++|+.++. ...... ..... ..
T Consensus 187 ~~~~~~~--h~~~v~~~~~sp~~~~~~~l~s~~~d-----~~i~vwd~~~~~-------------~~~~~~~~h~~~v~~ 246 (450)
T 2vdu_B 187 TQEPILG--HVSMLTDVHLIKDSDGHQFIITSDRD-----EHIKISHYPQCF-------------IVDKWLFGHKHFVSS 246 (450)
T ss_dssp CCCCSEE--CSSCEEEEEEEECTTSCEEEEEEETT-----SCEEEEEESCTT-------------CEEEECCCCSSCEEE
T ss_pred cceeeec--ccCceEEEEEcCCCCCCcEEEEEcCC-----CcEEEEECCCCc-------------eeeeeecCCCCceEE
Confidence 001111 2234668899999 8888765532 448888887642 122212 11111 22
Q ss_pred EEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccC-----------------------CCCceeeeEEEecCCEE
Q 003878 364 EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPE-----------------------AERDVLESATAVNLNQM 420 (789)
Q Consensus 364 ~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~-----------------------~~~~~i~~v~~~~~~~l 420 (789)
..|+ +|+.|+..+ .+..|.++|+.+++....+..+ .....+..+.+++++..
T Consensus 247 ~~~s-d~~~l~s~~----~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 247 ICCG-KDYLLLSAG----GDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp EEEC-STTEEEEEE----SSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSE
T ss_pred EEEC-CCCEEEEEe----CCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCE
Confidence 3488 898887554 3468999999887622222110 11245678888886555
Q ss_pred EEEEE-eCCeEEEEEEEC--CCC---ceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCc------EEEEEECCCCC
Q 003878 421 IVSYL-SDVKYVLQIRDL--KNG---SLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPG------IVYQCNLKTET 487 (789)
Q Consensus 421 v~~~~-~~g~~~L~~~dl--~tG---~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~------~ly~~dl~tg~ 487 (789)
++... .++ .|++|++ .++ +....+..+ +.+..+++++ +.++++..+...|. .+|.++..+++
T Consensus 322 l~~~~~~d~--~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~--~~~~v~~~~~~~~~~~~~~i~v~~~~~~~~~ 395 (450)
T 2vdu_B 322 VAFFVEATK--CIIILEMSEKQKGDLALKQIITFP-YNVISLSAHN--DEFQVTLDNKESSGVQKNFAKFIEYNLNENS 395 (450)
T ss_dssp EEEEETTCS--EEEEEEECSSSTTCEEEEEEEECS-SCEEEEEEET--TEEEEEECCTTCCSSCCCSEEEEEEETTTTE
T ss_pred EEEEECCCC--eEEEEEeccCCCCceeeccEeccC-CceEEEEecC--CcEEEEEecccCCCCCCcceEEEEEEcCCCe
Confidence 55555 554 6888888 444 333444444 5677788887 35777888877776 89999888773
No 253
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.20 E-value=1.7e-09 Score=118.65 Aligned_cols=294 Identities=11% Similarity=0.010 Sum_probs=166.8
Q ss_pred EEeEEeCCCCc-EEEEEEecCCceEEEEEEEEc----CCCce------ecccccccccc---cccCccceeeeeeccccc
Q 003878 134 LIKVSVSEDAK-YLAYALSYSGSDWATIKLMRI----EDQIV------EADALSWVCFC---FSHSFGYFFHLTISLLNV 199 (789)
Q Consensus 134 ~~~~~~SpDg~-~la~~~~~~g~~~~~i~v~dl----~tg~~------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 199 (789)
+..+++||||+ +||.+.. ...|++||+ .+++. .. .+...... ...+.+ -..+..+.
T Consensus 48 v~~~~~s~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~v~~~~~s 117 (425)
T 1r5m_A 48 IVSSTWNPLDESILAYGEK-----NSVARLARIVETDQEGKKYWKLTIIA-ELRHPFALSASSGKTTN----QVTCLAWS 117 (425)
T ss_dssp CSEEEECSSCTTEEEEEET-----BTEEEEEEEEEC------CEEEEEEE-EEECCCCCC------CB----CEEEEEEC
T ss_pred eEEEEECCCCCcEEEEecC-----CceEEEEEEecccCCccccccccccc-cccccccccccccCCCC----ceEEEEEc
Confidence 56789999999 8886432 347999999 88862 11 11110000 000011 11222334
Q ss_pred cccccccccccceeeEEEeeeccccceeeeeeec---------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCc---
Q 003878 200 PTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVS---------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGT--- 267 (789)
Q Consensus 200 p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~---------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~--- 267 (789)
|++ .+++++..+|...+|.... .-....++|+||++.|+....+..-...+...+.
T Consensus 118 ~~~------------~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 185 (425)
T 1r5m_A 118 HDG------------NSIVTGVENGELRLWNKTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQ 185 (425)
T ss_dssp TTS------------SEEEEEETTSCEEEEETTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEE
T ss_pred CCC------------CEEEEEeCCCeEEEEeCCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEE
Confidence 565 3677778889999997433 2224678999999999877654321000000000
Q ss_pred -----------------------c-----------ccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcE
Q 003878 268 -----------------------E-----------TDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQY 313 (789)
Q Consensus 268 -----------------------~-----------~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~ 313 (789)
. --......|+++++.+... ...+.. +...+..+.|+|||++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~--~~~~~~--~~~~i~~~~~~~~~~~ 261 (425)
T 1r5m_A 186 HFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTP--TGKLIG--HHGPISVLEFNDTNKL 261 (425)
T ss_dssp EECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSC--SEEECC--CSSCEEEEEEETTTTE
T ss_pred EeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCce--eeeecc--CCCceEEEEECCCCCE
Confidence 0 0001123466666655422 122222 2334668899999998
Q ss_pred EEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccc-eeEEEecCCCEEEEEECCCCCCceEEEEECC
Q 003878 314 LVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLK 392 (789)
Q Consensus 314 l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~ 392 (789)
|+....+ ..|+++|+.++. ....+...... ....|+|+| .++..+. +..|..+|+.
T Consensus 262 l~~~~~d-----~~i~i~d~~~~~-------------~~~~~~~~~~~i~~~~~~~~~-~l~~~~~----d~~i~i~d~~ 318 (425)
T 1r5m_A 262 LLSASDD-----GTLRIWHGGNGN-------------SQNCFYGHSQSIVSASWVGDD-KVISCSM----DGSVRLWSLK 318 (425)
T ss_dssp EEEEETT-----SCEEEECSSSBS-------------CSEEECCCSSCEEEEEEETTT-EEEEEET----TSEEEEEETT
T ss_pred EEEEcCC-----CEEEEEECCCCc-------------cceEecCCCccEEEEEECCCC-EEEEEeC----CCcEEEEECC
Confidence 8876532 348888887632 12222211111 223488988 5544332 3689999998
Q ss_pred CCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCc--------------------eeeecccCCe-
Q 003878 393 EPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGS--------------------LLHQLPIEIG- 451 (789)
Q Consensus 393 ~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~--------------------~~~~l~~~~~- 451 (789)
+++....+..+. ..+..+.+++++.++++...++ .|.+|++.+++ .+..+..+..
T Consensus 319 ~~~~~~~~~~~~--~~i~~~~~s~~~~~l~~~~~dg--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 394 (425)
T 1r5m_A 319 QNTLLALSIVDG--VPIFAGRISQDGQKYAVAFMDG--QVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDN 394 (425)
T ss_dssp TTEEEEEEECTT--CCEEEEEECTTSSEEEEEETTS--CEEEEECHHHHC--------------CEECCEEEEECCTTCC
T ss_pred CCcEeEecccCC--ccEEEEEEcCCCCEEEEEECCC--eEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccC
Confidence 775233333332 4678899998777777787776 68889987666 4455554433
Q ss_pred -eEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 452 -SVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 452 -~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
.+..+.++++++.++.... -+.++.|++.
T Consensus 395 ~~v~~~~~s~~~~~l~~~~~----dg~i~iw~~~ 424 (425)
T 1r5m_A 395 DYIFDLSWNCAGNKISVAYS----LQEGSVVAIP 424 (425)
T ss_dssp CCEEEEEECTTSSEEEEEES----SSCCEEEECC
T ss_pred CceEEEEccCCCceEEEEec----CceEEEEeec
Confidence 7888999999987664432 2467777764
No 254
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=99.20 E-value=1.3e-10 Score=120.30 Aligned_cols=103 Identities=16% Similarity=0.099 Sum_probs=72.1
Q ss_pred ccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 003878 538 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 617 (789)
Q Consensus 538 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~ 617 (789)
.|.||++||..+... .|.. ....|.++||.|+++|.||.|..... ...+++|+.+.+..+++.-..++
T Consensus 16 ~~~vvllHG~~~~~~--~w~~-~~~~L~~~~~~vi~~Dl~GhG~S~~~---------~~~~~~~~a~~l~~~l~~l~~~~ 83 (264)
T 1r3d_A 16 TPLVVLVHGLLGSGA--DWQP-VLSHLARTQCAALTLDLPGHGTNPER---------HCDNFAEAVEMIEQTVQAHVTSE 83 (264)
T ss_dssp BCEEEEECCTTCCGG--GGHH-HHHHHTTSSCEEEEECCTTCSSCC----------------CHHHHHHHHHHHTTCCTT
T ss_pred CCcEEEEcCCCCCHH--HHHH-HHHHhcccCceEEEecCCCCCCCCCC---------CccCHHHHHHHHHHHHHHhCcCC
Confidence 488999999776543 3444 34555547999999999998865321 11346677666666666532332
Q ss_pred CcEEEEeeChHHHHHHH---HHHhCCCceeEEEecCCc
Q 003878 618 RKLCIEGGSNGGLLVGA---CINQRPDLFGCALAHVGV 652 (789)
Q Consensus 618 ~~i~i~G~S~GG~l~~~---~~~~~pd~f~a~v~~~p~ 652 (789)
.++.++|||+||.+++. ++.++|++++++|+..+.
T Consensus 84 ~p~~lvGhSmGG~va~~~~~~a~~~p~~v~~lvl~~~~ 121 (264)
T 1r3d_A 84 VPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGH 121 (264)
T ss_dssp SEEEEEEETHHHHHHHHHHHHTTTTTSEEEEEEEESCC
T ss_pred CceEEEEECHhHHHHHHHHHHHhhCccccceEEEecCC
Confidence 23999999999999999 778899999999987653
No 255
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.19 E-value=6.9e-09 Score=116.12 Aligned_cols=204 Identities=11% Similarity=0.044 Sum_probs=127.0
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|+|||+.|+++.. ....|.+|++.....+....+.....+..+..+.|+|||++|+.
T Consensus 105 v~~~~~s~d~~~l~~~~~------------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 166 (450)
T 2vdu_B 105 IRNLRLTSDESRLIACAD------------------SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVII 166 (450)
T ss_dssp EEEEEECTTSSEEEEEEG------------------GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred eEEEEEcCCCCEEEEEEC------------------CCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEE
Confidence 468899999999876642 23458888887211222333322122344668999999999987
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce-eEEEecC---CCEEEEEECCCCCCceEEEEECC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIAND---DTVFTFLTNKDAPKYKIIRVDLK 392 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~d---G~~l~~~tn~~~~~~~L~~~dl~ 392 (789)
... ...++++++.++... ..+...+....... ...|+|+ |+.|+..+ . +..|..+|+.
T Consensus 167 ~~~-----~g~v~~~~~~~~~~~---------~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~-~---d~~i~vwd~~ 228 (450)
T 2vdu_B 167 ADK-----FGDVYSIDINSIPEE---------KFTQEPILGHVSMLTDVHLIKDSDGHQFIITSD-R---DEHIKISHYP 228 (450)
T ss_dssp EET-----TSEEEEEETTSCCCS---------SCCCCCSEECSSCEEEEEEEECTTSCEEEEEEE-T---TSCEEEEEES
T ss_pred EeC-----CCcEEEEecCCcccc---------cccceeeecccCceEEEEEcCCCCCCcEEEEEc-C---CCcEEEEECC
Confidence 653 356899998774311 00111112111112 2348998 66665433 2 3578888988
Q ss_pred CCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-----------------------
Q 003878 393 EPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE----------------------- 449 (789)
Q Consensus 393 ~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~----------------------- 449 (789)
++.....+.... ...+..+.++ ++.++++...++ .|.+||+.+|+.+..+...
T Consensus 229 ~~~~~~~~~~~h-~~~v~~~~~s-d~~~l~s~~~d~--~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (450)
T 2vdu_B 229 QCFIVDKWLFGH-KHFVSSICCG-KDYLLLSAGGDD--KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENND 304 (450)
T ss_dssp CTTCEEEECCCC-SSCEEEEEEC-STTEEEEEESSS--EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------
T ss_pred CCceeeeeecCC-CCceEEEEEC-CCCEEEEEeCCC--eEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccc
Confidence 776333433222 2567888888 677777888776 7999999988765555421
Q ss_pred --CeeEEEeecccCCcEEEEEEcCCCCCcEEEEEEC
Q 003878 450 --IGSVNAISARREDSVVFISFTSFLIPGIVYQCNL 483 (789)
Q Consensus 450 --~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl 483 (789)
...+..+.++++++.+++... .-..++.|++
T Consensus 305 ~~~~~v~~i~~~~~~~~l~~~~~---~d~~i~iw~~ 337 (450)
T 2vdu_B 305 IIEFAVSKIIKSKNLPFVAFFVE---ATKCIIILEM 337 (450)
T ss_dssp CBCCCEEEEEECSSSSEEEEEET---TCSEEEEEEE
T ss_pred cceEEEEEEEEeCCCCEEEEEEC---CCCeEEEEEe
Confidence 234667888899987776542 2468888888
No 256
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.19 E-value=1.9e-09 Score=115.15 Aligned_cols=198 Identities=17% Similarity=0.029 Sum_probs=132.6
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|+|+++.++-... ...|++|++.++.. +..+... ...+..+.|+|||++|+.
T Consensus 83 v~~~~~~~~~~~l~s~s~-------------------D~~i~lWd~~~~~~--~~~~~~~--~~~~~~~~~spdg~~l~~ 139 (321)
T 3ow8_A 83 VVSVDISHTLPIAASSSL-------------------DAHIRLWDLENGKQ--IKSIDAG--PVDAWTLAFSPDSQYLAT 139 (321)
T ss_dssp EEEEEECSSSSEEEEEET-------------------TSEEEEEETTTTEE--EEEEECC--TTCCCCEEECTTSSEEEE
T ss_pred EEEEEECCCCCEEEEEeC-------------------CCcEEEEECCCCCE--EEEEeCC--CccEEEEEECCCCCEEEE
Confidence 468899999988775533 24688999876532 2223322 222346899999999986
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
... ...+.++++.++. ....+..... .....|+|+|+.|+..+. ++.|..+|+.+++
T Consensus 140 g~~-----dg~v~i~~~~~~~-------------~~~~~~~~~~~v~~~~~spdg~~lasg~~----dg~i~iwd~~~~~ 197 (321)
T 3ow8_A 140 GTH-----VGKVNIFGVESGK-------------KEYSLDTRGKFILSIAYSPDGKYLASGAI----DGIINIFDIATGK 197 (321)
T ss_dssp ECT-----TSEEEEEETTTCS-------------EEEEEECSSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTTE
T ss_pred EcC-----CCcEEEEEcCCCc-------------eeEEecCCCceEEEEEECCCCCEEEEEcC----CCeEEEEECCCCc
Confidence 542 3568889988742 1112221111 122348999998876543 3578899998876
Q ss_pred CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCC
Q 003878 396 DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIP 475 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P 475 (789)
....+..+. ..+..+.+++++.++++...++ .|++||+.+++....+......+..++++|++..++... .-
T Consensus 198 ~~~~~~~h~--~~v~~l~~spd~~~l~s~s~dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s----~D 269 (321)
T 3ow8_A 198 LLHTLEGHA--MPIRSLTFSPDSQLLVTASDDG--YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSS----SD 269 (321)
T ss_dssp EEEEECCCS--SCCCEEEECTTSCEEEEECTTS--CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE----TT
T ss_pred EEEEEcccC--CceeEEEEcCCCCEEEEEcCCC--eEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEe----CC
Confidence 333333333 4578899998778888888877 689999987776666665666788899999998665332 24
Q ss_pred cEEEEEECCCCC
Q 003878 476 GIVYQCNLKTET 487 (789)
Q Consensus 476 ~~ly~~dl~tg~ 487 (789)
.++..||+.+++
T Consensus 270 ~~v~iwd~~~~~ 281 (321)
T 3ow8_A 270 KSVKVWDVGTRT 281 (321)
T ss_dssp SCEEEEETTTTE
T ss_pred CcEEEEeCCCCE
Confidence 579999998874
No 257
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.19 E-value=7.9e-10 Score=120.47 Aligned_cols=201 Identities=10% Similarity=-0.007 Sum_probs=129.7
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
..++|||||+.++.... .....|++|++.+... +..++. ...+.+++|||||++|+..
T Consensus 137 ~~v~fSpDg~~la~as~-----------------~~d~~i~iwd~~~~~~--~~~~~~---~~~V~~v~fspdg~~l~s~ 194 (365)
T 4h5i_A 137 KLVYISREGTVAAIASS-----------------KVPAIMRIIDPSDLTE--KFEIET---RGEVKDLHFSTDGKVVAYI 194 (365)
T ss_dssp EEEEECTTSSCEEEEES-----------------CSSCEEEEEETTTTEE--EEEEEC---SSCCCEEEECTTSSEEEEE
T ss_pred EEEEEcCCCCEEEEEEC-----------------CCCCEEEEeECCCCcE--EEEeCC---CCceEEEEEccCCceEEec
Confidence 46899999999987642 2345689999876532 222332 2235689999999999865
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc--ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD--AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
+. ..+.+++..++.. .......... ..-..|+|||+.++..+..+.....+..+++....
T Consensus 195 s~------~~~~~~~~~~~~~------------~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~ 256 (365)
T 4h5i_A 195 TG------SSLEVISTVTGSC------------IARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGN 256 (365)
T ss_dssp CS------SCEEEEETTTCCE------------EEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTE
T ss_pred cc------eeEEEEEeccCcc------------eeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccce
Confidence 42 2356677665420 0111111111 11234899999888766554444567777776543
Q ss_pred C----eEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeec-ccCCeeEEEeecccCCcEEEEEEc
Q 003878 396 D----WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL-PIEIGSVNAISARREDSVVFISFT 470 (789)
Q Consensus 396 ~----~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l-~~~~~~v~~~s~s~d~~~l~~~~s 470 (789)
. ...+..+. ..+..+++++++.++++...|+ .|++||+++++.+..+ ..+...|..++++||++.|+ +.+
T Consensus 257 ~~~~~~~~~~~~~--~~V~~~~~Spdg~~lasgs~D~--~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~la-S~S 331 (365)
T 4h5i_A 257 TSVLRSKQVTNRF--KGITSMDVDMKGELAVLASNDN--SIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVA-SVS 331 (365)
T ss_dssp EEEEEEEEEESSC--SCEEEEEECTTSCEEEEEETTS--CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEE-EEE
T ss_pred ecceeeeeecCCC--CCeEeEEECCCCCceEEEcCCC--EEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEE-EEe
Confidence 1 11222232 4578899999888888888887 6899999988876654 44577788999999998655 332
Q ss_pred CCCCCcEEEEEECCCC
Q 003878 471 SFLIPGIVYQCNLKTE 486 (789)
Q Consensus 471 s~~~P~~ly~~dl~tg 486 (789)
.-.++..+++...
T Consensus 332 ---~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 332 ---AANTIHIIKLPLN 344 (365)
T ss_dssp ---TTSEEEEEECCTT
T ss_pred ---CCCeEEEEEcCCC
Confidence 3458888887644
No 258
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.19 E-value=9.1e-10 Score=120.52 Aligned_cols=281 Identities=10% Similarity=0.006 Sum_probs=169.5
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
+...|..+.|||||++||- |+...+|+|||+.+++.+. .+... .+ -..+..+.|++
T Consensus 65 H~~~V~~~~~sp~~~~l~s-----~s~D~~v~iWd~~~~~~~~-~~~~h-------~~----~v~~~~~s~~g------- 120 (380)
T 3iz6_a 65 HSGKVYSLDWTPEKNWIVS-----ASQDGRLIVWNALTSQKTH-AIKLH-------CP----WVMECAFAPNG------- 120 (380)
T ss_dssp CSSCEEEEEECTTSSCEEE-----EETTSEEEEEETTTTEEEE-EEECC-------CT----TCCCCEECTTS-------
T ss_pred cccEEEEEEEcCCCCEEEE-----EeCCCeEEEEECCCCccce-EEecC-------CC----CEEEEEECCCC-------
Confidence 3345788999999999884 3334589999999986543 11111 00 01122334666
Q ss_pred cceeeEEEeeeccccceeeeeeec-----------------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCC
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVS-----------------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSN 272 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~-----------------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~ 272 (789)
.+++++..++...||.+.. .-......|+|++...+++..
T Consensus 121 -----~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s------------------ 177 (380)
T 3iz6_a 121 -----QSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGS------------------ 177 (380)
T ss_dssp -----SEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEEC------------------
T ss_pred -----CEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEEC------------------
Confidence 3677888999999997642 011245678887655444422
Q ss_pred cccEEEEEECCCCCCCcEEEEec---CCCCeeEEEEEEec-CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCC
Q 003878 273 LYHEFYYHFLGTKQSEDILCWKD---PEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDG 348 (789)
Q Consensus 273 ~~~~i~~~~lg~~~~~~~~~~~~---~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~ 348 (789)
....|.+|++.++.. +.++.. ..+...+..+.+++ ++..++..+.+ ..|.++|+....
T Consensus 178 ~D~~i~~wd~~~~~~--~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D-----~~v~~wd~~~~~----------- 239 (380)
T 3iz6_a 178 GDQTCVLWDVTTGQR--ISIFGSEFPSGHTADVLSLSINSLNANMFISGSCD-----TTVRLWDLRITS----------- 239 (380)
T ss_dssp TTSCEEEECTTTCCE--EEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETT-----SCEEEEETTTTC-----------
T ss_pred CCCcEEEEEcCCCcE--EEEeecccCCCCccCeEEEEeecCCCCEEEEEECC-----CeEEEEECCCCC-----------
Confidence 234588888876532 233321 12233456778876 77777655432 348888987421
Q ss_pred CCccEeeeccccce-eEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCC-----CceeeeEEEecCCEEEE
Q 003878 349 LLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE-----RDVLESATAVNLNQMIV 422 (789)
Q Consensus 349 ~~~~~~l~~~~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~-----~~~i~~v~~~~~~~lv~ 422 (789)
.....+....... -..|+|+|+.|+..+ .+..|..+|+.++.....+..+.. ...+..+++++++.+++
T Consensus 240 -~~~~~~~~h~~~v~~v~~~p~~~~l~s~s----~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~ 314 (380)
T 3iz6_a 240 -RAVRTYHGHEGDINSVKFFPDGQRFGTGS----DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLF 314 (380)
T ss_dssp -CCCEEECCCSSCCCEEEECTTSSEEEEEC----SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEE
T ss_pred -cceEEECCcCCCeEEEEEecCCCeEEEEc----CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEE
Confidence 1122222221112 234899999876432 346799999988752222222211 12367788988777888
Q ss_pred EEEeCCeEEEEEEECCCCceeeec----ccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 423 SYLSDVKYVLQIRDLKNGSLLHQL----PIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 423 ~~~~~g~~~L~~~dl~tG~~~~~l----~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
+...++ .|++||+.+++....+ ..+.+.|..++++|++..++ +. + .-..+..|++..+
T Consensus 315 ~g~~dg--~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~-sg-s--~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 315 AGYSNG--DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALC-TG-S--WDKNLKIWAFSGH 376 (380)
T ss_dssp EECTTS--CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEE-EE-C--TTSCEEEEECCSS
T ss_pred EEECCC--CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEE-Ee-e--CCCCEEEEecCCC
Confidence 887776 7899999877764444 22355677888999998654 22 2 2457888887655
No 259
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=98.80 E-value=2.2e-12 Score=135.24 Aligned_cols=120 Identities=18% Similarity=0.110 Sum_probs=80.2
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCc
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQ 596 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~ 596 (789)
+| .++.+... ++.|.||++||..+... .|.. ....|. +||.|+++|+||.|.....-. ......
T Consensus 13 ~g-~~~~~~~~--------g~~p~vv~lHG~~~~~~--~~~~-~~~~l~-~g~~v~~~D~~G~G~s~~~~~---~~~~~~ 76 (304)
T 3b12_A 13 GD-VTINCVVG--------GSGPALLLLHGFPQNLH--MWAR-VAPLLA-NEYTVVCADLRGYGGSSKPVG---APDHAN 76 (304)
Confidence 67 66654321 34588999999876543 3333 345566 899999999999775432100 000122
Q ss_pred chHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCccc
Q 003878 597 NCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMD 654 (789)
Q Consensus 597 ~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~d 654 (789)
.+++++.+.+..+++. .+.+++.++|||+||.+++.++.++|++++++|+..|...
T Consensus 77 ~~~~~~~~~l~~~l~~--l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 132 (304)
T 3b12_A 77 YSFRAMASDQRELMRT--LGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPT 132 (304)
Confidence 3344444444444433 2446899999999999999999999999999999887654
No 260
>1llf_A Lipase 3; candida cylindracea cholesterol esterase, sterol ester acylh hydrolase; HET: NAG F23; 1.40A {Candida cylindracea} SCOP: c.69.1.17 PDB: 1cle_A* 1lpm_A* 1lpn_A* 1lpo_A* 1lpp_A* 1lps_A* 1crl_A* 1trh_A* 3rar_A* 1gz7_A*
Probab=99.18 E-value=4.9e-12 Score=144.50 Aligned_cols=230 Identities=17% Similarity=0.187 Sum_probs=134.7
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCC-CCCHHH---HHHHHcCCeEEEEEeecCCC-CCC--hhHH
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-SFSVSR---TILMRHLGAVFCIANIRGGG-EYG--EEWH 587 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~---~~~l~~~G~~v~~~~~RG~g-~~g--~~~~ 587 (789)
+.|. +.+.++.|++....++.|+||++|||....... .+.... ..+..+.|++|+.+|||.+. +|. .+..
T Consensus 94 sedc---l~l~v~~P~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~~~l~~~~~~~~~~~vvv~~nYRl~~~gf~~~~~~~ 170 (534)
T 1llf_A 94 SEDC---LTINVVRPPGTKAGANLPVMLWIFGGGFEIGSPTIFPPAQMVTKSVLMGKPIIHVAVNYRVASWGFLAGDDIK 170 (534)
T ss_dssp CSCC---CEEEEEECTTCCTTCCEEEEEEECCSTTTSCCGGGSCCHHHHHHHHHTTCCCEEEEECCCCHHHHHCCSHHHH
T ss_pred CCCC---eEEEEEECCCCCCCCCceEEEEEeCCCcccCCCcccCchHHHHHHHhcCCCEEEEEeCCCCCCCCCCCccccc
Confidence 4555 556777898654456899999999985443332 233211 12233368999999999754 111 1111
Q ss_pred hcccccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhC--------CCceeEEEecCCccccc
Q 003878 588 KGGALAKKQNCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQR--------PDLFGCALAHVGVMDML 656 (789)
Q Consensus 588 ~~~~~~~~~~~~~D~~~~~~~L~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~--------pd~f~a~v~~~p~~d~~ 656 (789)
. .......+.|..++++|+.++ -..||+||.|+|+|+||.+++.++... +.+|+++|+++|.....
T Consensus 171 ~---~~~~n~gl~D~~~Al~wv~~ni~~fggDp~~Vti~G~SaGg~~~~~~l~~~~~~~~~~~~~lf~~ai~~Sg~~~~~ 247 (534)
T 1llf_A 171 A---EGSGNAGLKDQRLGMQWVADNIAGFGGDPSKVTIFGESAGSMSVLCHLIWNDGDNTYKGKPLFRAGIMQSGAMVPS 247 (534)
T ss_dssp H---HTCTTHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGCCEETTEESCSEEEEESCCSCCC
T ss_pred c---cCCCchhHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHhHHHHHHHHcCCCccccccccchhHhHhhhccCcccC
Confidence 1 123345689999999999875 236999999999999999888777653 56899999999843221
Q ss_pred ccccc-cCC---ccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCC-CeEEEEecCCCCCCCcHHHHHHHHH
Q 003878 657 RYHKF-TIG---HAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQY-PSTLLLTADHDDRVVPLHSLKLLAT 731 (789)
Q Consensus 657 ~~~~~-~~~---~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~-pp~Li~~g~~D~~V~~~~~~~~~~~ 731 (789)
..... ... .......|++...+..+.|++.++-..++... ..... ..+ ...+.....-|..+.+.++.++.++
T Consensus 248 ~~~~~~~~~~~~~~~~~~~gc~~~~~~l~cLr~~~~~~l~~a~~-~~~~~-~~~~~~~~~f~P~~Dg~~l~~~p~~~~~~ 325 (534)
T 1llf_A 248 DPVDGTYGNEIYDLFVSSAGCGSASDKLACLRSASSDTLLDATN-NTPGF-LAYSSLRLSYLPRPDGKNITDDMYKLVRD 325 (534)
T ss_dssp CCTTSHHHHHHHHHHHHHTTCTTCSSHHHHHHHSCHHHHHHHHH-TSCCT-TSTTTTSCSSCCCCCSSSSCSCHHHHHHT
T ss_pred CCcChHHHHHHHHHHHHHhCCCCcHHHHHHHHcCCHHHHHHHHH-hcccc-cccccccccceeecCCccccCCHHHHHHc
Confidence 11100 000 01123457664334455666655432211100 00000 000 0001122334666777777777655
Q ss_pred HHHhhccCCCCCCCCCcEEEEEeCCCCcCCC
Q 003878 732 MQYVLCTSLENSPQTNPIIGRIERKAGHGVG 762 (789)
Q Consensus 732 L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~ 762 (789)
.+.. ++|+.+-...++||.+.
T Consensus 326 g~~~----------~vp~l~G~~~~Eg~~f~ 346 (534)
T 1llf_A 326 GKYA----------SVPVIIGDQNDEGTIFG 346 (534)
T ss_dssp TCSC----------CCCEEEEEETBTTHHHH
T ss_pred CCCC----------CCCEEEEEecCchhhhh
Confidence 4433 78999999999999763
No 261
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.18 E-value=9.1e-10 Score=119.54 Aligned_cols=200 Identities=9% Similarity=0.040 Sum_probs=124.6
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|+|||+.|+....+ ..|++|++.++. .+..+.. +...+..++++|+++.+++
T Consensus 142 V~~v~~spdg~~l~sgs~d-------------------g~v~iwd~~~~~--~~~~~~~--h~~~v~~v~~s~~~~~~~~ 198 (357)
T 4g56_B 142 VKTLSVFSDGTQAVSGGKD-------------------FSVKVWDLSQKA--VLKSYNA--HSSEVNCVAACPGKDTIFL 198 (357)
T ss_dssp EEEEEECSSSSEEEEEETT-------------------SCEEEEETTTTE--EEEEECC--CSSCEEEEEECTTCSSCEE
T ss_pred EEEEEECCCCCEEEEEeCC-------------------CeEEEEECCCCc--EEEEEcC--CCCCEEEEEEccCCCceee
Confidence 4789999999999865433 248888887642 2223332 3344678899999986665
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
.... ...|.++|+.++.. ........... .....|+|++..+++.... +..|..+|+.+++
T Consensus 199 s~~~----dg~v~~wd~~~~~~-----------~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~---d~~i~~wd~~~~~ 260 (357)
T 4g56_B 199 SCGE----DGRILLWDTRKPKP-----------ATRIDFCASDTIPTSVTWHPEKDDTFACGDE---TGNVSLVNIKNPD 260 (357)
T ss_dssp EEET----TSCEEECCTTSSSC-----------BCBCCCTTCCSCEEEEEECTTSTTEEEEEES---SSCEEEEESSCGG
T ss_pred eecc----CCceEEEECCCCce-----------eeeeeeccccccccchhhhhcccceEEEeec---ccceeEEECCCCc
Confidence 5543 24488889877421 00101111111 1123488886655444332 3578899998876
Q ss_pred CeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeeccc-CCcEEEEEEcCCC
Q 003878 396 DWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARR-EDSVVFISFTSFL 473 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~-d~~~l~~~~ss~~ 473 (789)
....+..+. ..+..+++++++ .++++...|+ .|++||+++++..+.+ .....|..++++| ++..|+ +.+
T Consensus 261 ~~~~~~~~~--~~v~~l~~sp~~~~~lasgs~D~--~i~iwd~~~~~~~~~~-~H~~~V~~vafsP~d~~~l~-s~s--- 331 (357)
T 4g56_B 261 SAQTSAVHS--QNITGLAYSYHSSPFLASISEDC--TVAVLDADFSEVFRDL-SHRDFVTGVAWSPLDHSKFT-TVG--- 331 (357)
T ss_dssp GCEEECCCS--SCEEEEEECSSSSCCEEEEETTS--CEEEECTTSCEEEEEC-CCSSCEEEEEECSSSTTEEE-EEE---
T ss_pred EeEEEeccc--eeEEEEEEcCCCCCEEEEEeCCC--EEEEEECCCCcEeEEC-CCCCCEEEEEEeCCCCCEEE-EEc---
Confidence 444444333 567888998753 6788888887 6889999988765444 3456788899998 566443 433
Q ss_pred CCcEEEEEECCCC
Q 003878 474 IPGIVYQCNLKTE 486 (789)
Q Consensus 474 ~P~~ly~~dl~tg 486 (789)
.-.+++.|++.+.
T Consensus 332 ~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 332 WDHKVLHHHLPSE 344 (357)
T ss_dssp TTSCEEEEECC--
T ss_pred CCCeEEEEECCCC
Confidence 2457888888653
No 262
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.18 E-value=6.7e-09 Score=111.95 Aligned_cols=284 Identities=9% Similarity=0.004 Sum_probs=162.0
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccce
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIF 212 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 212 (789)
.+..++|||||++||-+. ...+|+|||++++......... ..|.+. ..+..+.|++
T Consensus 18 ~v~~l~~sp~g~~las~~-----~D~~i~iw~~~~~~~~~~~~~~-----~~h~~~----v~~~~~sp~g---------- 73 (345)
T 3fm0_A 18 RCWFLAWNPAGTLLASCG-----GDRRIRIWGTEGDSWICKSVLS-----EGHQRT----VRKVAWSPCG---------- 73 (345)
T ss_dssp CEEEEEECTTSSCEEEEE-----TTSCEEEEEEETTEEEEEEEEC-----SSCSSC----EEEEEECTTS----------
T ss_pred cEEEEEECCCCCEEEEEc-----CCCeEEEEEcCCCcceeeeeec-----cccCCc----EEEEEECCCC----------
Confidence 356788999999998543 3447999999987532111000 000110 1122334666
Q ss_pred eeEEEeeeccccceeeeeeec------------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEE
Q 003878 213 FFFYLFSLVKSTIYSFWSVVS------------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYH 280 (789)
Q Consensus 213 ~~~~~~~s~~~g~~~l~~~~~------------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 280 (789)
.+++++..+|+..||.... .-....++|+|||+.|+....+ ..|++|
T Consensus 74 --~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D-------------------~~v~iw 132 (345)
T 3fm0_A 74 --NYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRD-------------------KSVWVW 132 (345)
T ss_dssp --SEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------------SCEEEE
T ss_pred --CEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECC-------------------CeEEEE
Confidence 4678888999999997643 1124678999999998866433 248888
Q ss_pred ECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc
Q 003878 281 FLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD 360 (789)
Q Consensus 281 ~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 360 (789)
++.+..... .+.....+...+..+.|+|||++|+..+.+ ..|.++++.++. ......+.....
T Consensus 133 d~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d-----~~i~~w~~~~~~-----------~~~~~~~~~h~~ 195 (345)
T 3fm0_A 133 EVDEEDEYE-CVSVLNSHTQDVKHVVWHPSQELLASASYD-----DTVKLYREEEDD-----------WVCCATLEGHES 195 (345)
T ss_dssp EECTTSCEE-EEEEECCCCSCEEEEEECSSSSCEEEEETT-----SCEEEEEEETTE-----------EEEEEEECCCSS
T ss_pred ECCCCCCeE-EEEEecCcCCCeEEEEECCCCCEEEEEeCC-----CcEEEEEecCCC-----------EEEEEEecCCCC
Confidence 887643221 222222233446789999999998876643 236667765421 011112222112
Q ss_pred cee-EEEecCCCEEEEEECCCCCCceEEEEEC--CCCC----------CeEEe--ccCCCCceeeeEEEecCCEEEEEEE
Q 003878 361 AQY-EVIANDDTVFTFLTNKDAPKYKIIRVDL--KEPN----------DWFEV--IPEAERDVLESATAVNLNQMIVSYL 425 (789)
Q Consensus 361 ~~~-~~~s~dG~~l~~~tn~~~~~~~L~~~dl--~~~~----------~~~~l--~~~~~~~~i~~v~~~~~~~lv~~~~ 425 (789)
... ..|+|+|+.|+..+.. ..|..+++ .+.. .++.+ +.......+..+++++++..+++..
T Consensus 196 ~v~~l~~sp~g~~l~s~s~D----~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~ 271 (345)
T 3fm0_A 196 TVWSLAFDPSGQRLASCSDD----RTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATAC 271 (345)
T ss_dssp CEEEEEECTTSSEEEEEETT----SCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEE
T ss_pred ceEEEEECCCCCEEEEEeCC----CeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEe
Confidence 122 3489999988765543 34555553 2111 11111 1111224577889988777777777
Q ss_pred eCCeEEEEEEECCCCceee---------ecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 426 SDVKYVLQIRDLKNGSLLH---------QLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 426 ~~g~~~L~~~dl~tG~~~~---------~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
.++ .|++|+.+++.... ....+...|..++++|++..++++.+ .-+++..|++.+++
T Consensus 272 ~d~--~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s---~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 272 GDD--AIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCS---DDGEVAFWKYQRPE 337 (345)
T ss_dssp TTS--CEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEE---TTSCEEEEEECC--
T ss_pred CCC--eEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcC---CCCcEEEEEecCCC
Confidence 777 46666665432100 11123556888999998864555543 34678888887663
No 263
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.16 E-value=1.3e-08 Score=117.17 Aligned_cols=266 Identities=13% Similarity=0.081 Sum_probs=168.4
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
..+..++++|||++|+.+.. ...|++||..+. .+. .+... .+... +....|++
T Consensus 263 ~~v~~v~~~~d~~~l~~~~~-----d~~i~~w~~~~~-~~~-~~~~h-------~~~v~----~~~~~~~~--------- 315 (577)
T 2ymu_A 263 SSVNGVAFRPDGQTIASASD-----DKTVKLWNRNGQ-LLQ-TLTGH-------SSSVW----GVAFSPDG--------- 315 (577)
T ss_dssp SCEEEEEECTTSSEEEEEET-----TSCEEEEETTSC-EEE-EECCC-------SSCEE----EEEECTTS---------
T ss_pred CCEEEEEEcCCCCEEEEEeC-----CCEEEEEeCCCc-EEE-EEecC-------CCCeE----EEEECCCC---------
Confidence 35678899999999985443 236899997544 221 11111 01011 11223555
Q ss_pred eeeEEEeeeccccceeeeeeec---------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEEC
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVS---------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFL 282 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~---------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l 282 (789)
..++++..+|+..+|.... ......++|+|||+.|+....+ ..+.+++.
T Consensus 316 ---~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~d-------------------g~v~~~~~ 373 (577)
T 2ymu_A 316 ---QTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASASDD-------------------KTVKLWNR 373 (577)
T ss_dssp ---SEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------------SEEEEEET
T ss_pred ---CEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEeCC-------------------CEEEEEcC
Confidence 3566777888899997644 1223568999999999876432 24677775
Q ss_pred CCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce
Q 003878 283 GTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ 362 (789)
Q Consensus 283 g~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~ 362 (789)
.. +....+.. +...+..+++||||++|+.... ...|.+++.... ....+.......
T Consensus 374 ~~---~~~~~~~~--~~~~v~~~~~s~dg~~l~~~~~-----d~~v~~~~~~~~--------------~~~~~~~~~~~v 429 (577)
T 2ymu_A 374 NG---QLLQTLTG--HSSSVRGVAFSPDGQTIASASD-----DKTVKLWNRNGQ--------------LLQTLTGHSSSV 429 (577)
T ss_dssp TC---CEEEEEEC--CSSCEEEEEECTTSSCEEEEET-----TSEEEEECTTCC--------------EEEEEECCSSCE
T ss_pred CC---CEEEEecC--CCCCeEEEEECCCCCEEEEEeC-----CCEEEEEeCCCC--------------EEEEecCCCCCe
Confidence 32 22222222 2344678899999999987653 245778875431 122222222222
Q ss_pred e-EEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCc
Q 003878 363 Y-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGS 441 (789)
Q Consensus 363 ~-~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~ 441 (789)
. ..|+||++.|+..+. +..|..+++.+.. ...+..+. ..+..+++++++.++++...++ .|++|+.+ |+
T Consensus 430 ~~~~~s~d~~~l~~~~~----d~~v~~w~~~~~~-~~~~~~~~--~~v~~~~~spd~~~las~~~d~--~i~iw~~~-~~ 499 (577)
T 2ymu_A 430 WGVAFSPDDQTIASASD----DKTVKLWNRNGQL-LQTLTGHS--SSVRGVAFSPDGQTIASASDDK--TVKLWNRN-GQ 499 (577)
T ss_dssp EEEEECTTSSEEEEEET----TSEEEEEETTSCE-EEEEECCS--SCEEEEEECTTSCEEEEEETTS--EEEEEETT-SC
T ss_pred EEEEECCCCCEEEEEcC----CCEEEEEECCCCE-EEEEcCCC--CCEEEEEEcCCCCEEEEEeCCC--EEEEEcCC-CC
Confidence 2 348999998876543 3578888976543 44555554 4578899998778888888887 68889975 77
Q ss_pred eeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 442 LLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 442 ~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
..+.+..+...|..+.++|+++.|+... .-..++.||..
T Consensus 500 ~~~~~~~h~~~v~~l~~s~dg~~l~s~~----~dg~v~lwd~~ 538 (577)
T 2ymu_A 500 LLQTLTGHSSSVRGVAFSPDGQTIASAS----DDKTVKLWNRN 538 (577)
T ss_dssp EEEEEECCSSCEEEEEECTTSSCEEEEE----TTSEEEEECTT
T ss_pred EEEEEeCCCCCEEEEEEcCCCCEEEEEE----CcCEEEEEeCC
Confidence 7677776677788899999998765432 23578999863
No 264
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.16 E-value=1.1e-08 Score=109.88 Aligned_cols=226 Identities=10% Similarity=0.028 Sum_probs=144.4
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceec---ccccccccccccCccceeeeeeccccccccccccccc
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA---DALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
.+..+.+||||++||.+. ....|++||+.+++... ..+... .+
T Consensus 99 ~v~~~~~s~~~~~l~s~~-----~d~~v~iw~~~~~~~~~~~~~~~~~h-------~~---------------------- 144 (340)
T 1got_B 99 WVMTCAYAPSGNYVACGG-----LDNICSIYNLKTREGNVRVSRELAGH-------TG---------------------- 144 (340)
T ss_dssp CEEEEEECTTSSEEEEEE-----TTCEEEEEETTTCSBSCEEEEEEECC-------SS----------------------
T ss_pred cEEEEEECCCCCEEEEEe-----CCCeEEEEECccCCCcceeEEEecCC-------Cc----------------------
Confidence 367788999999998543 24589999998864211 111110 00
Q ss_pred cceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCc
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED 289 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~ 289 (789)
....+.|+||++ |+.... ...|.+|++.+.. .
T Consensus 145 --------------------------~v~~~~~~~~~~-l~s~s~-------------------d~~i~~wd~~~~~--~ 176 (340)
T 1got_B 145 --------------------------YLSCCRFLDDNQ-IVTSSG-------------------DTTCALWDIETGQ--Q 176 (340)
T ss_dssp --------------------------CEEEEEEEETTE-EEEEET-------------------TSCEEEEETTTTE--E
T ss_pred --------------------------cEEEEEECCCCc-EEEEEC-------------------CCcEEEEECCCCc--E
Confidence 135688999886 544332 2348888987643 2
Q ss_pred EEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce-eEEEec
Q 003878 290 ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIAN 368 (789)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~ 368 (789)
+..+.. +...+..+.|+|||++++....+ ..|.++|+.++. ....+....... ...|+|
T Consensus 177 ~~~~~~--h~~~v~~~~~~~~~~~l~sg~~d-----~~v~~wd~~~~~-------------~~~~~~~h~~~v~~v~~~p 236 (340)
T 1got_B 177 TTTFTG--HTGDVMSLSLAPDTRLFVSGACD-----ASAKLWDVREGM-------------CRQTFTGHESDINAICFFP 236 (340)
T ss_dssp EEEECC--CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCS-------------EEEEECCCSSCEEEEEECT
T ss_pred EEEEcC--CCCceEEEEECCCCCEEEEEeCC-----CcEEEEECCCCe-------------eEEEEcCCcCCEEEEEEcC
Confidence 223332 33446789999999988765533 448889988742 122222211112 234899
Q ss_pred CCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeeccc
Q 003878 369 DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI 448 (789)
Q Consensus 369 dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~ 448 (789)
+|+.|+..+. ++.|..+|+.+++....+..+.....+..+.+++++.++++...++ .|.+||+.+++....+..
T Consensus 237 ~~~~l~s~s~----d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~--~i~vwd~~~~~~~~~~~~ 310 (340)
T 1got_B 237 NGNAFATGSD----DATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDF--NCNVWDALKADRAGVLAG 310 (340)
T ss_dssp TSSEEEEEET----TSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTS--EEEEEETTTCCEEEEEEC
T ss_pred CCCEEEEEcC----CCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCC--eEEEEEcccCcEeeEeec
Confidence 9998775443 3578889998765222222222223578889998778888888887 799999987776666665
Q ss_pred CCeeEEEeecccCCcEEE
Q 003878 449 EIGSVNAISARREDSVVF 466 (789)
Q Consensus 449 ~~~~v~~~s~s~d~~~l~ 466 (789)
+.+.|..+++++++..++
T Consensus 311 h~~~v~~~~~s~dg~~l~ 328 (340)
T 1got_B 311 HDNRVSCLGVTDDGMAVA 328 (340)
T ss_dssp CSSCEEEEEECTTSSCEE
T ss_pred CCCcEEEEEEcCCCCEEE
Confidence 667788889999988655
No 265
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.15 E-value=6.1e-09 Score=115.45 Aligned_cols=239 Identities=9% Similarity=-0.044 Sum_probs=152.5
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
..|..++|||||++||.+. ...+|++||+++++.+.. +... .+....+. +++
T Consensus 148 ~~V~sv~fspdg~~lasgs-----~Dg~v~iWd~~~~~~~~~-~~~h-------~~~v~~~s------~~~--------- 199 (420)
T 4gga_A 148 EYISSVAWIKEGNYLAVGT-----SSAEVQLWDVQQQKRLRN-MTSH-------SARVGSLS------WNS--------- 199 (420)
T ss_dssp CCEEEEEECTTSSEEEEEE-----TTSCEEEEETTTTEEEEE-ECCC-------SSCEEEEE------EET---------
T ss_pred CcEEEEEECCCCCEEEEEE-----CCCeEEEEEcCCCcEEEE-EeCC-------CCceEEEe------eCC---------
Confidence 4588999999999998543 344799999999976531 1111 01000010 111
Q ss_pred eeeEEEeeeccccceeeeeeec-----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEE
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVS-----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYH 280 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~-----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 280 (789)
.++.++..++...+|.... .-......|+|+|+.++....+ ..+.++
T Consensus 200 ---~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D-------------------~~v~i~ 257 (420)
T 4gga_A 200 ---YILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------------NLVNVW 257 (420)
T ss_dssp ---TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------------SCEEEE
T ss_pred ---CEEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeecc-------------------ccceEE
Confidence 3567777888888876543 1123568899999988866443 247777
Q ss_pred ECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc
Q 003878 281 FLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD 360 (789)
Q Consensus 281 ~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 360 (789)
++.+.......+.....+...+..+.|+|++..++....... ...|.++|+.++. ....+.....
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~--D~~I~iwd~~t~~-------------~~~~~~~~~~ 322 (420)
T 4gga_A 258 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS--DRHIRIWNVCSGA-------------CLSAVDAHSQ 322 (420)
T ss_dssp ESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTT--TCEEEEEETTTTE-------------EEEEEECSSC
T ss_pred eeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecC--CCEEEEEeCCccc-------------cceeeccccc
Confidence 776554322222222223344667899999888876654322 4568999998752 1222222222
Q ss_pred ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCC
Q 003878 361 AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNG 440 (789)
Q Consensus 361 ~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG 440 (789)
.....|+++++.++..+.. .++.|.++|+.+++....+..|. ..+..+++++++.++++...|+ .|++||+.+.
T Consensus 323 v~~~~~~~~~~~lv~~sg~--~d~~I~iwd~~~~~~v~~l~gH~--~~V~~l~~spdg~~l~S~s~D~--tvriWdv~~~ 396 (420)
T 4gga_A 323 VCSILWSPHYKELISGHGF--AQNQLVIWKYPTMAKVAELKGHT--SRVLSLTMSPDGATVASAAADE--TLRLWRCFEL 396 (420)
T ss_dssp EEEEEEETTTTEEEEEECT--TTCCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSCEEEEETTT--EEEEECCSCS
T ss_pred eeeeeecCCCCeEEEEEec--CCCEEEEEECCCCcEEEEEcCCC--CCEEEEEEcCCCCEEEEEecCC--eEEEEECCCC
Confidence 2334589999998876543 34679999998887455555554 5688999999778888888887 6888998644
Q ss_pred c
Q 003878 441 S 441 (789)
Q Consensus 441 ~ 441 (789)
.
T Consensus 397 ~ 397 (420)
T 4gga_A 397 D 397 (420)
T ss_dssp S
T ss_pred C
Confidence 3
No 266
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.15 E-value=2.2e-08 Score=110.88 Aligned_cols=227 Identities=12% Similarity=0.035 Sum_probs=145.7
Q ss_pred EEEeeeccccceeeeeeec----c-----------cccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEE
Q 003878 215 FYLFSLVKSTIYSFWSVVS----Q-----------FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 279 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~----~-----------~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 279 (789)
++++.+..++...+|.+.. + -....++|+|||+.++ +.. ....|++
T Consensus 135 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-s~~------------------~d~~v~~ 195 (433)
T 3bws_A 135 RLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWV-SQM------------------QANAVHV 195 (433)
T ss_dssp EEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEE-EEG------------------GGTEEEE
T ss_pred eEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEE-EEC------------------CCCEEEE
Confidence 5777777888888887653 1 0234589998886554 422 2346899
Q ss_pred EECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc
Q 003878 280 HFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF 359 (789)
Q Consensus 280 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~ 359 (789)
+++.+... +..+.. +......++|+|||+++++.... ...|+++|+.++. ....+....
T Consensus 196 ~d~~~~~~--~~~~~~--~~~~~~~~~~~~~~~~l~~~~~~----~~~i~~~d~~~~~-------------~~~~~~~~~ 254 (433)
T 3bws_A 196 FDLKTLAY--KATVDL--TGKWSKILLYDPIRDLVYCSNWI----SEDISVIDRKTKL-------------EIRKTDKIG 254 (433)
T ss_dssp EETTTCCE--EEEEEC--SSSSEEEEEEETTTTEEEEEETT----TTEEEEEETTTTE-------------EEEECCCCS
T ss_pred EECCCceE--EEEEcC--CCCCeeEEEEcCCCCEEEEEecC----CCcEEEEECCCCc-------------EEEEecCCC
Confidence 99876432 222222 22345678999999999776532 3569999998742 111111111
Q ss_pred cceeEEEecCCCEEEEEECCCC----CCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCeEEEEE
Q 003878 360 DAQYEVIANDDTVFTFLTNKDA----PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQI 434 (789)
Q Consensus 360 ~~~~~~~s~dG~~l~~~tn~~~----~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~~~L~~ 434 (789)
......|+|+|+.+++.+.... .++.|+.+|+.+++ ....+.+. ..+..+.+++++ .+++....++ .|++
T Consensus 255 ~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~-~~~~~~~~--~~~~~~~~~~~g~~l~~~~~~~~--~v~v 329 (433)
T 3bws_A 255 LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEK-LIDTIGPP--GNKRHIVSGNTENKIYVSDMCCS--KIEV 329 (433)
T ss_dssp EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTE-EEEEEEEE--ECEEEEEECSSTTEEEEEETTTT--EEEE
T ss_pred CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCc-EEeeccCC--CCcceEEECCCCCEEEEEecCCC--EEEE
Confidence 1223458999998887664321 35789999998775 33333322 245678888754 5777666665 7999
Q ss_pred EECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCC-----------cEEEEEECCCCC
Q 003878 435 RDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIP-----------GIVYQCNLKTET 487 (789)
Q Consensus 435 ~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P-----------~~ly~~dl~tg~ 487 (789)
||+++++....+.. ...+..+.++++++.+++.......+ +.++.||+.+++
T Consensus 330 ~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~ 392 (433)
T 3bws_A 330 YDLKEKKVQKSIPV-FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDT 392 (433)
T ss_dssp EETTTTEEEEEEEC-SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTE
T ss_pred EECCCCcEEEEecC-CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCc
Confidence 99998876555543 34466788999999887765543322 599999998884
No 267
>4i19_A Epoxide hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 2.15A {Streptomyces carzinostaticus subsp}
Probab=99.15 E-value=2.5e-09 Score=117.42 Aligned_cols=122 Identities=15% Similarity=0.081 Sum_probs=89.3
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcC---------CeEEEEEeecCCCCCChh
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHL---------GAVFCIANIRGGGEYGEE 585 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~---------G~~v~~~~~RG~g~~g~~ 585 (789)
..|| .+|++..+.+.+ +..|.||++||.+++... |.. ....|.+. ||.|+++|.||.|....
T Consensus 74 ~i~g-~~i~~~~~~~~~----~~~~plll~HG~~~s~~~--~~~-~~~~L~~~~~~~~~~~~~~~vi~~dl~G~G~S~~- 144 (388)
T 4i19_A 74 EIDG-ATIHFLHVRSPE----PDATPMVITHGWPGTPVE--FLD-IIGPLTDPRAHGGDPADAFHLVIPSLPGFGLSGP- 144 (388)
T ss_dssp EETT-EEEEEEEECCSS----TTCEEEEEECCTTCCGGG--GHH-HHHHHHCGGGGTSCGGGCEEEEEECCTTSGGGCC-
T ss_pred EECC-eEEEEEEccCCC----CCCCeEEEECCCCCCHHH--HHH-HHHHHhCcccccCCCCCCeEEEEEcCCCCCCCCC-
Confidence 3489 999877665543 456789999998776433 333 34566634 99999999999774321
Q ss_pred HHhcccccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 586 WHKGGALAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 586 ~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
......+++++.+.+..|++. ...++++++|||+||.++..++.++|++++++|+..|+.
T Consensus 145 ------~~~~~~~~~~~a~~~~~l~~~--lg~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 204 (388)
T 4i19_A 145 ------LKSAGWELGRIAMAWSKLMAS--LGYERYIAQGGDIGAFTSLLLGAIDPSHLAGIHVNLLQT 204 (388)
T ss_dssp ------CSSCCCCHHHHHHHHHHHHHH--TTCSSEEEEESTHHHHHHHHHHHHCGGGEEEEEESSCCC
T ss_pred ------CCCCCCCHHHHHHHHHHHHHH--cCCCcEEEEeccHHHHHHHHHHHhChhhceEEEEecCCC
Confidence 111134677777777777665 233589999999999999999999999999999988643
No 268
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.14 E-value=7.2e-09 Score=110.96 Aligned_cols=283 Identities=6% Similarity=-0.033 Sum_probs=165.5
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccc---ccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPT---YKLFLYL 208 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~---~~~~~~~ 208 (789)
..+..+++||||++++.+.+.. +....|++||+.+++......... .+. ..+..+.|+ +
T Consensus 19 ~~v~~~~~~p~~~~l~~~~s~~-~~d~~v~iw~~~~~~~~~~~~~~~-------~~~----v~~~~~~~~~~~~------ 80 (357)
T 3i2n_A 19 YTVFDCKWVPCSAKFVTMGNFA-RGTGVIQLYEIQHGDLKLLREIEK-------AKP----IKCGTFGATSLQQ------ 80 (357)
T ss_dssp SCEEEEEECTTSSEEEEEEC---CCCEEEEEEEECSSSEEEEEEEEE-------SSC----EEEEECTTCCTTT------
T ss_pred CceEEEEEcCCCceEEEecCcc-CCCcEEEEEeCCCCcccceeeecc-------cCc----EEEEEEcCCCCCC------
Confidence 4578899999998887654321 125689999999986542111000 000 111222343 3
Q ss_pred ccceeeEEEeeeccccceeeeeeec-----------ccccceE------EEEeCCcEEEEEEccCCCCCCCCCCCccccC
Q 003878 209 RGIFFFFYLFSLVKSTIYSFWSVVS-----------QFKFSSI------AWTHDSKGFFYSRYPAPKEGKDMDAGTETDS 271 (789)
Q Consensus 209 ~~~~~~~~~~~s~~~g~~~l~~~~~-----------~~~~~~~------~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~ 271 (789)
.+++++..+|...+|.+.. .-....+ +|+||++.|+....+
T Consensus 81 ------~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d---------------- 138 (357)
T 3i2n_A 81 ------RYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRD---------------- 138 (357)
T ss_dssp ------CCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETT----------------
T ss_pred ------ceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCC----------------
Confidence 4677888899999998764 1112344 457899988866433
Q ss_pred CcccEEEEEECCCCCCCcEEEEecCCC--CeeEEEEE----EecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccc
Q 003878 272 NLYHEFYYHFLGTKQSEDILCWKDPEH--PKYIFSGH----VTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 345 (789)
Q Consensus 272 ~~~~~i~~~~lg~~~~~~~~~~~~~~~--~~~~~~~~----~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 345 (789)
..|.+|++.+.... ...+..... ...+..+. ++|++++++.... ...|+++|+.++.
T Consensus 139 ---~~i~vwd~~~~~~~-~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~~-------- 201 (357)
T 3i2n_A 139 ---GTVKVWDPRQKDDP-VANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYD-----NGDIKLFDLRNMA-------- 201 (357)
T ss_dssp ---SCEEEECTTSCSSC-SEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEET-----TSEEEEEETTTTE--------
T ss_pred ---CeEEEEeCCCCCCc-ceeccccCCCCCCceEEEEEEeccCCCCCEEEEEcc-----CCeEEEEECccCc--------
Confidence 24888888765422 223322111 12344455 7899999987653 3468999998742
Q ss_pred cCCCCccEeeec-cccceeEEEec---CCCEEEEEECCCCCCceEEEEECCCCCCeEEec---cCCCCceeeeEEEecCC
Q 003878 346 RDGLLPFVKLID-GFDAQYEVIAN---DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVI---PEAERDVLESATAVNLN 418 (789)
Q Consensus 346 ~~~~~~~~~l~~-~~~~~~~~~s~---dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~---~~~~~~~i~~v~~~~~~ 418 (789)
...... ........|+| +++.|+..+. ++.|..+|+.++.....+. .......+..+.+++++
T Consensus 202 ------~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 271 (357)
T 3i2n_A 202 ------LRWETNIKNGVCSLEFDRKDISMNKLVATSL----EGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQN 271 (357)
T ss_dssp ------EEEEEECSSCEEEEEESCSSSSCCEEEEEES----TTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTE
T ss_pred ------eeeecCCCCceEEEEcCCCCCCCCEEEEECC----CCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCC
Confidence 111111 11112234888 8888776543 3578888876543111111 01123567889999865
Q ss_pred E-EEEEEEeCCeEEEEEEECCCCce-------------------eeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEE
Q 003878 419 Q-MIVSYLSDVKYVLQIRDLKNGSL-------------------LHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIV 478 (789)
Q Consensus 419 ~-lv~~~~~~g~~~L~~~dl~tG~~-------------------~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~l 478 (789)
. ++++...++ .|++|++.++.. +..+......+..++++++++.++++.+ .-+.+
T Consensus 272 ~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~---~d~~i 346 (357)
T 3i2n_A 272 RELFLTAGGAG--GLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSS---FDQTV 346 (357)
T ss_dssp EEEEEEEETTS--EEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEE---TTSEE
T ss_pred CcEEEEEeCCC--cEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEec---CCCcE
Confidence 5 788888887 677788764432 1223333556778899999987775543 24688
Q ss_pred EEEECCCC
Q 003878 479 YQCNLKTE 486 (789)
Q Consensus 479 y~~dl~tg 486 (789)
+.||+.+.
T Consensus 347 ~iw~~~~~ 354 (357)
T 3i2n_A 347 RVLIVTKL 354 (357)
T ss_dssp EEEEECC-
T ss_pred EEEECCCc
Confidence 88888654
No 269
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.13 E-value=4.4e-09 Score=115.91 Aligned_cols=240 Identities=10% Similarity=-0.013 Sum_probs=152.4
Q ss_pred EeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceee
Q 003878 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFF 214 (789)
Q Consensus 135 ~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 214 (789)
..+++||||++|+.+.. . ..|++||+.+++... .+....
T Consensus 60 ~~~~~s~~g~~l~~~~~-d----~~v~i~d~~~~~~~~-~~~~~~----------------------------------- 98 (420)
T 3vl1_A 60 KGNTFEKVGSHLYKARL-D----GHDFLFNTIIRDGSK-MLKRAD----------------------------------- 98 (420)
T ss_dssp TTCEEEEEETTEEEEEE-T----TEEEEEECCSEETTT-TSCSCC-----------------------------------
T ss_pred cceeeeecCCeEEEEEc-C----CcEEEEEecccceee-EEecCC-----------------------------------
Confidence 35789999999986654 2 379999999875432 111110
Q ss_pred EEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEe
Q 003878 215 FYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWK 294 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~ 294 (789)
......|+|||+.|+....+ ..|.+|++.+.. .+..
T Consensus 99 ---------------------~~~~~~~~~~~~~l~~~~~d-------------------g~i~iwd~~~~~----~~~~ 134 (420)
T 3vl1_A 99 ---------------------YTAVDTAKLQMRRFILGTTE-------------------GDIKVLDSNFNL----QREI 134 (420)
T ss_dssp ---------------------EEEEEEECSSSCEEEEEETT-------------------SCEEEECTTSCE----EEEE
T ss_pred ---------------------ceEEEEEecCCCEEEEEECC-------------------CCEEEEeCCCcc----eeee
Confidence 12455789999998876433 247888876432 2222
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEecCCCEE
Q 003878 295 DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVF 373 (789)
Q Consensus 295 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dG~~l 373 (789)
...+...+..+.|+|||++|+..+. ...|.++|+.++. ....+........ ..|+|+|+.|
T Consensus 135 ~~~h~~~v~~~~~~~~~~~l~s~s~-----d~~i~iwd~~~~~-------------~~~~~~~h~~~v~~~~~~~~~~~l 196 (420)
T 3vl1_A 135 DQAHVSEITKLKFFPSGEALISSSQ-----DMQLKIWSVKDGS-------------NPRTLIGHRATVTDIAIIDRGRNV 196 (420)
T ss_dssp TTSSSSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTCC-------------CCEEEECCSSCEEEEEEETTTTEE
T ss_pred cccccCccEEEEECCCCCEEEEEeC-----CCeEEEEeCCCCc-------------CceEEcCCCCcEEEEEEcCCCCEE
Confidence 2234455778999999998876653 3568999998742 1222322222222 3489999988
Q ss_pred EEEECCCCCCceEEEEECCCCCCeEEeccCC-CCceeee---------------------EEEecCCEEEEEEEeCCeEE
Q 003878 374 TFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-ERDVLES---------------------ATAVNLNQMIVSYLSDVKYV 431 (789)
Q Consensus 374 ~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~-~~~~i~~---------------------v~~~~~~~lv~~~~~~g~~~ 431 (789)
+..+. +..|..+|+.+++....+..+. ....+.. +.+++++.++++...++ .
T Consensus 197 ~s~~~----d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg--~ 270 (420)
T 3vl1_A 197 LSASL----DGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG--V 270 (420)
T ss_dssp EEEET----TSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS--C
T ss_pred EEEcC----CCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC--e
Confidence 75443 3568889998775233332211 1122333 33455567888888887 6
Q ss_pred EEEEECCCCceeeecccC-CeeEEEeecccCCc-EEEEEEcCCCCCcEEEEEECCCCC
Q 003878 432 LQIRDLKNGSLLHQLPIE-IGSVNAISARREDS-VVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 432 L~~~dl~tG~~~~~l~~~-~~~v~~~s~s~d~~-~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
|.+||+.+++....+... ...+..+.+++++. .++... .-+.++.||+.+++
T Consensus 271 i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~----~dg~i~vwd~~~~~ 324 (420)
T 3vl1_A 271 ITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGY----ENGMLAQWDLRSPE 324 (420)
T ss_dssp EEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEE----TTSEEEEEETTCTT
T ss_pred EEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEe----CCCeEEEEEcCCCc
Confidence 899999887765555433 56688889999988 544332 23689999998875
No 270
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.13 E-value=1.5e-08 Score=118.18 Aligned_cols=309 Identities=9% Similarity=0.002 Sum_probs=172.3
Q ss_pred EeCCEEEEEEEcCCCCeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCC
Q 003878 88 KRGNKYFYFHNTGLQPQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED 167 (789)
Q Consensus 88 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~t 167 (789)
++|+.+.+-. + .. +++.+..+++....+. ++...+..+++||||++||- |+...+|+|||+.+
T Consensus 28 pdg~~l~~~~---~-~~--v~l~~~~~~~~~~~~~------~h~~~v~~~~~spdg~~las-----g~~d~~v~lWd~~~ 90 (611)
T 1nr0_A 28 PAGDKIQYCN---G-TS--VYTVPVGSLTDTEIYT------EHSHQTTVAKTSPSGYYCAS-----GDVHGNVRIWDTTQ 90 (611)
T ss_dssp TTSSEEEEEE---T-TE--EEEEETTCSSCCEEEC------CCSSCEEEEEECTTSSEEEE-----EETTSEEEEEESSS
T ss_pred CCCCEEEeCC---C-CE--EEEecCCCcccCeEec------CCCCceEEEEECCCCcEEEE-----EeCCCCEEEeECCC
Confidence 4677777643 1 22 4444433333322221 23345788999999999994 33345899999987
Q ss_pred Cceec-ccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeecc---ccceeeeeeec--------cc
Q 003878 168 QIVEA-DALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVK---STIYSFWSVVS--------QF 235 (789)
Q Consensus 168 g~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~---~g~~~l~~~~~--------~~ 235 (789)
++... ..+... .+ -..+..+.|+++ .++..++. .+...+|...- .-
T Consensus 91 ~~~~~~~~~~~~-------~~----~v~~v~fs~dg~-----------~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~ 148 (611)
T 1nr0_A 91 TTHILKTTIPVF-------SG----PVKDISWDSESK-----------RIAAVGEGRERFGHVFLFDTGTSNGNLTGQAR 148 (611)
T ss_dssp TTCCEEEEEECS-------SS----CEEEEEECTTSC-----------EEEEEECCSSCSEEEEETTTCCBCBCCCCCSS
T ss_pred CcceeeEeeccc-------CC----ceEEEEECCCCC-----------EEEEEECCCCceeEEEEeeCCCCcceecCCCC
Confidence 64321 111110 01 012233446764 33433332 24556664321 11
Q ss_pred ccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEE
Q 003878 236 KFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLV 315 (789)
Q Consensus 236 ~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~ 315 (789)
....++|+||++..+.+.. ....|.+|+..+. +....+. .+...+..++|||||++|+
T Consensus 149 ~v~~v~f~p~~~~~l~s~s------------------~D~~v~lwd~~~~--~~~~~l~--~H~~~V~~v~fspdg~~la 206 (611)
T 1nr0_A 149 AMNSVDFKPSRPFRIISGS------------------DDNTVAIFEGPPF--KFKSTFG--EHTKFVHSVRYNPDGSLFA 206 (611)
T ss_dssp CEEEEEECSSSSCEEEEEE------------------TTSCEEEEETTTB--EEEEEEC--CCSSCEEEEEECTTSSEEE
T ss_pred CceEEEECCCCCeEEEEEe------------------CCCeEEEEECCCC--eEeeeec--cccCceEEEEECCCCCEEE
Confidence 2468999999985444422 1234778876542 1122233 3445677899999999988
Q ss_pred EEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-------cccccee-EEEecCCCEEEEEECCCCCCceEE
Q 003878 316 MCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-------DGFDAQY-EVIANDDTVFTFLTNKDAPKYKII 387 (789)
Q Consensus 316 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-------~~~~~~~-~~~s~dG~~l~~~tn~~~~~~~L~ 387 (789)
..+.+ ..|.++|+.++.. ...+. ....... ..|+|||+.|+..+. +..|.
T Consensus 207 s~s~D-----~~i~lwd~~~g~~-------------~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~----D~~v~ 264 (611)
T 1nr0_A 207 STGGD-----GTIVLYNGVDGTK-------------TGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASA----DKTIK 264 (611)
T ss_dssp EEETT-----SCEEEEETTTCCE-------------EEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEET----TSEEE
T ss_pred EEECC-----CcEEEEECCCCcE-------------eeeeccccccccccCCCEEEEEECCCCCEEEEEeC----CCeEE
Confidence 66533 3488889876421 11110 1111122 348999998775443 35677
Q ss_pred EEECCCCCCeEEec-----------------------------------------cCCCCceeeeEEEecCCEEEEEEEe
Q 003878 388 RVDLKEPNDWFEVI-----------------------------------------PEAERDVLESATAVNLNQMIVSYLS 426 (789)
Q Consensus 388 ~~dl~~~~~~~~l~-----------------------------------------~~~~~~~i~~v~~~~~~~lv~~~~~ 426 (789)
.+|+.+++....+. .......+..+++++++..+++...
T Consensus 265 lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~ 344 (611)
T 1nr0_A 265 IWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADA 344 (611)
T ss_dssp EEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeC
Confidence 77876543111110 0111245678889887778888888
Q ss_pred CCeEEEEEEECCCCceeeecc-cCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 427 DVKYVLQIRDLKNGSLLHQLP-IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 427 ~g~~~L~~~dl~tG~~~~~l~-~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
++ .|++||+.+|+..+.+. .+...+..+.+++++. ++ +.+ .-..+..++..++
T Consensus 345 D~--~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~-l~-s~s---~d~~v~~w~~~~~ 398 (611)
T 1nr0_A 345 EG--HINSWDISTGISNRVFPDVHATMITGIKTTSKGD-LF-TVS---WDDHLKVVPAGGS 398 (611)
T ss_dssp TS--CEEEEETTTCCEEECSSCSCSSCEEEEEECTTSC-EE-EEE---TTTEEEEECSSSS
T ss_pred CC--cEEEEECCCCceeeecccCCcceEEEEEECCCCc-EE-EEE---cCCceEEeecCCc
Confidence 87 78899998887644332 2355677777776654 32 222 2346777777654
No 271
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.12 E-value=8.7e-09 Score=123.24 Aligned_cols=208 Identities=12% Similarity=0.018 Sum_probs=131.0
Q ss_pred ceEEEE-eCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCC-CC-CcEEEEecCCCCeeEEEEEEecCCcEE
Q 003878 238 SSIAWT-HDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK-QS-EDILCWKDPEHPKYIFSGHVTEDGQYL 314 (789)
Q Consensus 238 ~~~~ws-pDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~-~~-~~~~~~~~~~~~~~~~~~~~SpDG~~l 314 (789)
.+++|| |||+.|+|+.... .....+||+.++.++ .. .+.+ .. ...++.|||||+.|
T Consensus 177 ~~~~~S~PDG~~lAy~~~~~--------------G~~~~~l~v~dl~~g~~~l~~~~--~~-----~~~~~~WspDg~~l 235 (751)
T 2xe4_A 177 MEVKPAPPEHDLVAFSVDMS--------------GNEVYTIEFKRISDPSQTIADKV--SG-----TNGEIVWGPDHTSL 235 (751)
T ss_dssp EEEEECTTTTCEEEEEEESS--------------SSSCEEEEEEETTCTTCCCCCCE--EE-----ECSCCEECSSTTEE
T ss_pred eeeEecCCCCCEEEEEEeCC--------------CCceEEEEEEECCCCCEeCCccc--cC-----ceeeEEEecCCCEE
Confidence 679999 9999999997642 223457999999876 31 1111 11 11357899999999
Q ss_pred EEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc--c-ceeEEEecCCCEEEEEECCCCCCceEEEEEC
Q 003878 315 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF--D-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDL 391 (789)
Q Consensus 315 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~--~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl 391 (789)
++...+......+||+.++.++... -..+..+. . .....|||||++|++.++.. ...+|+++|+
T Consensus 236 ~y~~~d~~~~~~~v~~~~lgt~~~~------------~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~-~~~~l~~~d~ 302 (751)
T 2xe4_A 236 FYVTKDETLRENKVWRHVMGKLQSE------------DVCLYEEHNPLFSAFMYKAADTNTLCIGSQSP-ETAEVHLLDL 302 (751)
T ss_dssp EEEEECTTCCEEEEEEEETTSCGGG------------CEEEEECCCTTCEEEEEECTTSSEEEEEEECS-SCEEEEEEES
T ss_pred EEEEECCCCCCCEEEEEECCCCchh------------cEEEEecCCCceEEEEEECCCCCEEEEEecCC-CCceEEEEEC
Confidence 9987654333468999999874210 01121111 1 12245999999999988754 4689999999
Q ss_pred CCCC-Ce--EEeccCCCCceeeeEEEecCCEEEEEEEeC--CeEEEEEEECCCCceeee--cccC-CeeEEEeecccCCc
Q 003878 392 KEPN-DW--FEVIPEAERDVLESATAVNLNQMIVSYLSD--VKYVLQIRDLKNGSLLHQ--LPIE-IGSVNAISARREDS 463 (789)
Q Consensus 392 ~~~~-~~--~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~--g~~~L~~~dl~tG~~~~~--l~~~-~~~v~~~s~s~d~~ 463 (789)
+++. .+ +.+++... ....++.+..++.+++....+ +..+|++++++++...+. ++.. ...+..+++ .++
T Consensus 303 ~~~~~~~~~~~l~~~~~-~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~--~~~ 379 (751)
T 2xe4_A 303 RKGNAHNTLEIVRPREK-GVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAV--RSN 379 (751)
T ss_dssp SSCTTCCCEEESSCCCT-TCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEE--CSS
T ss_pred CCCCCCceeEEeecCCC-CceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEE--ECC
Confidence 8763 35 66666442 223334434457888887775 456999999975322233 3322 223444443 466
Q ss_pred EEEEEEcCCCCCcEEEEEEC
Q 003878 464 VVFISFTSFLIPGIVYQCNL 483 (789)
Q Consensus 464 ~l~~~~ss~~~P~~ly~~dl 483 (789)
.+++++.. .....++++++
T Consensus 380 ~lv~~~~~-~g~~~l~~~dl 398 (751)
T 2xe4_A 380 YLVVAGRR-AGLTRIWTMMA 398 (751)
T ss_dssp EEEEEEEE-TTEEEEEEEEC
T ss_pred EEEEEEEe-CCEEEEEEEec
Confidence 77776643 34568899986
No 272
>2ogt_A Thermostable carboxylesterase EST50; alpha/beta hydrolase, hydrolase; 1.58A {Geobacillus stearothermophilus} PDB: 2ogs_A
Probab=99.12 E-value=1.6e-11 Score=139.24 Aligned_cols=221 Identities=19% Similarity=0.158 Sum_probs=129.5
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCC---ccCCCCCCHHHHHHHHcCC-eEEEEEeecCCC-CCChhHHhc
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFN---ISVTPSFSVSRTILMRHLG-AVFCIANIRGGG-EYGEEWHKG 589 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~---~~~~~~~~~~~~~~l~~~G-~~v~~~~~RG~g-~~g~~~~~~ 589 (789)
+.|+ ..+ .++.|+. ..++.|+||++|||.. ......+.. ..+.. +| ++|+.+|||.+. +|+..-...
T Consensus 81 ~edc-l~l--~v~~P~~--~~~~~Pviv~iHGGg~~~g~~~~~~~~~--~~la~-~~~~vvv~~nYRlg~~Gf~~~~~~~ 152 (498)
T 2ogt_A 81 SEDG-LYL--NIWSPAA--DGKKRPVLFWIHGGAFLFGSGSSPWYDG--TAFAK-HGDVVVVTINYRMNVFGFLHLGDSF 152 (498)
T ss_dssp BSCC-CEE--EEEESCS--SSCCEEEEEEECCSTTTSCCTTCGGGCC--HHHHH-HHTCEEEEECCCCHHHHCCCCTTTT
T ss_pred CCCC-cEE--EEEecCC--CCCCCcEEEEEcCCccCCCCCCCCcCCH--HHHHh-CCCEEEEeCCCcCchhhccCchhhc
Confidence 5677 444 5567863 3467899999999963 332222332 34444 55 999999999421 222110000
Q ss_pred --ccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC--CCceeEEEecCCcccc-ccccc-
Q 003878 590 --GALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVMDM-LRYHK- 660 (789)
Q Consensus 590 --~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~--pd~f~a~v~~~p~~d~-~~~~~- 660 (789)
.....+...+.|.+++++|+.++- ..||+||.|+|+|+||.+++.++... +.+|+++|+++|..+. .....
T Consensus 153 ~~~~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~V~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~~~~~~~~~~ 232 (498)
T 2ogt_A 153 GEAYAQAGNLGILDQVAALRWVKENIAAFGGDPDNITIFGESAGAASVGVLLSLPEASGLFRRAMLQSGSGSLLLRSPET 232 (498)
T ss_dssp CGGGTTGGGHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTTTCBCHHH
T ss_pred cccccCCCCcccHHHHHHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcccccchhheeeeccCCccccccCHHH
Confidence 011223445899999999998762 25999999999999999998887753 4689999999997662 11110
Q ss_pred -ccCCccchhhcCCCCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccC
Q 003878 661 -FTIGHAWVSDFGCSEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTS 739 (789)
Q Consensus 661 -~~~~~~~~~e~g~p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~ 739 (789)
...........|++. +..+.|++.++...+.... ... ......|+ -|..+.+.++.++.+.-+..
T Consensus 233 ~~~~~~~~~~~~gc~~--~~~~~Lr~~~~~~l~~~~~-~~~-~~~~f~Pv------vDg~~lp~~p~~~~~~g~~~---- 298 (498)
T 2ogt_A 233 AMAMTERILDKAGIRP--GDRERLLSIPAEELLRAAL-SLG-PGVMYGPV------VDGRVLRRHPIEALRYGAAS---- 298 (498)
T ss_dssp HHHHHHHHHHHHTCCT--TCHHHHHHSCHHHHHHHHH-TTT-TSCCCCCB------CCSSSCCSCHHHHHHTTTTT----
T ss_pred HHHHHHHHHHHhCCCH--HHHHHHHcCCHHHHHHHHh-hcc-CCCceeee------eCCcccccCHHHHHhcCCCC----
Confidence 000111223456652 2234455554433221110 000 00012343 35556666666555433323
Q ss_pred CCCCCCCCcEEEEEeCCCCcCCCC
Q 003878 740 LENSPQTNPIIGRIERKAGHGVGL 763 (789)
Q Consensus 740 ~~~~~~~~~~~l~~~~~~gH~~~~ 763 (789)
++|+.+-...++|+.+..
T Consensus 299 ------~vp~liG~~~~Eg~~f~~ 316 (498)
T 2ogt_A 299 ------GIPILIGVTKDEYNLFTL 316 (498)
T ss_dssp ------TCCEEEEEETTHHHHTTT
T ss_pred ------CCCEEEEEeccchhhhhc
Confidence 789999999999997754
No 273
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.12 E-value=1.1e-08 Score=111.49 Aligned_cols=247 Identities=8% Similarity=-0.015 Sum_probs=148.8
Q ss_pred EEEeEEeCCCC-cEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 133 ALIKVSVSEDA-KYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 133 ~~~~~~~SpDg-~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
.+..+++|||| ++||.+.. ..+|++||+.+++.... +... .+.+
T Consensus 75 ~v~~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~-~~~~-----~h~~------------------------ 119 (383)
T 3ei3_B 75 RVTSLEWHPTHPTTVAVGSK-----GGDIILWDYDVQNKTSF-IQGM-----GPGD------------------------ 119 (383)
T ss_dssp CEEEEEECSSCTTEEEEEEB-----TSCEEEEETTSTTCEEE-ECCC-----STTC------------------------
T ss_pred CEEEEEECCCCCCEEEEEcC-----CCeEEEEeCCCccccee-eecC-----CcCC------------------------
Confidence 46788999999 77775433 33799999998865431 1100 0000
Q ss_pred eeeEEEeeeccccceeeeeeecccccceEEEEe-CCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcE
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTH-DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDI 290 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wsp-Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~ 290 (789)
....++|+| |++.|+.... ...|.+|++.+. ..
T Consensus 120 ------------------------~v~~~~~~~~~~~~l~s~~~-------------------d~~i~iwd~~~~---~~ 153 (383)
T 3ei3_B 120 ------------------------AITGMKFNQFNTNQLFVSSI-------------------RGATTLRDFSGS---VI 153 (383)
T ss_dssp ------------------------BEEEEEEETTEEEEEEEEET-------------------TTEEEEEETTSC---EE
T ss_pred ------------------------ceeEEEeCCCCCCEEEEEeC-------------------CCEEEEEECCCC---ce
Confidence 257899999 5566655432 235888998742 22
Q ss_pred EEEec-CCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce-eEEEec
Q 003878 291 LCWKD-PEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIAN 368 (789)
Q Consensus 291 ~~~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~ 368 (789)
..+.. ..+...+..+.|+|||++|+.... ...|+++|+... +...+....... -..|+|
T Consensus 154 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~i~d~~~~--------------~~~~~~~h~~~v~~~~~~~ 214 (383)
T 3ei3_B 154 QVFAKTDSWDYWYCCVDVSVSRQMLATGDS-----TGRLLLLGLDGH--------------EIFKEKLHKAKVTHAEFNP 214 (383)
T ss_dssp EEEECCCCSSCCEEEEEEETTTTEEEEEET-----TSEEEEEETTSC--------------EEEEEECSSSCEEEEEECS
T ss_pred EEEeccCCCCCCeEEEEECCCCCEEEEECC-----CCCEEEEECCCC--------------EEEEeccCCCcEEEEEECC
Confidence 22322 222344678999999999887653 356899998531 122232222222 234899
Q ss_pred CCCEEEEEECCCCCCceEEEEECCCCC---CeEEeccCCCCceeeeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceee
Q 003878 369 DDTVFTFLTNKDAPKYKIIRVDLKEPN---DWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLH 444 (789)
Q Consensus 369 dG~~l~~~tn~~~~~~~L~~~dl~~~~---~~~~l~~~~~~~~i~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~ 444 (789)
+++.+++.... +..|..+|+.+.+ .....+.+. ..+..+.+++ ++.++++...++ .|.+||+.+++...
T Consensus 215 ~~~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~l~~~~~d~--~i~iwd~~~~~~~~ 287 (383)
T 3ei3_B 215 RCDWLMATSSV---DATVKLWDLRNIKDKNSYIAEMPHE--KPVNAAYFNPTDSTKLLTTDQRN--EIRVYSSYDWSKPD 287 (383)
T ss_dssp SCTTEEEEEET---TSEEEEEEGGGCCSTTCEEEEEECS--SCEEEEEECTTTSCEEEEEESSS--EEEEEETTBTTSCS
T ss_pred CCCCEEEEEeC---CCEEEEEeCCCCCcccceEEEecCC--CceEEEEEcCCCCCEEEEEcCCC--cEEEEECCCCcccc
Confidence 99833333332 3678899987632 133333433 5688899998 777888887776 79999998776544
Q ss_pred ecccC-------CeeEEEeecccCCcEEEEEEc-----CCCCCcEEEEEECCCCC
Q 003878 445 QLPIE-------IGSVNAISARREDSVVFISFT-----SFLIPGIVYQCNLKTET 487 (789)
Q Consensus 445 ~l~~~-------~~~v~~~s~s~d~~~l~~~~s-----s~~~P~~ly~~dl~tg~ 487 (789)
.+... ...+. ..+++++..+.+.++ +-..-+.++.||+.+++
T Consensus 288 ~~~~~~~~~~~~~~~~~-~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~ 341 (383)
T 3ei3_B 288 QIIIHPHRQFQHLTPIK-ATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGG 341 (383)
T ss_dssp EEEECCBCCCTTSCCCC-CEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCC
T ss_pred ccccccccccccccceE-EeccCCCCceEEEecCCcccccCCCCeEEEEecCCCc
Confidence 33311 11111 234455555444432 23356789999998886
No 274
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.12 E-value=8.6e-09 Score=113.27 Aligned_cols=237 Identities=19% Similarity=0.122 Sum_probs=146.1
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccce
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIF 212 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 212 (789)
.+..+++||||++||.+. ...+|++||+++++.+. .+... .+
T Consensus 125 ~v~~v~~s~dg~~l~s~~-----~d~~i~iwd~~~~~~~~-~~~~h-------~~------------------------- 166 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGA-----EDRLIRIWDIENRKIVM-ILQGH-------EQ------------------------- 166 (393)
T ss_dssp BEEEEEECTTSSEEEEEE-----TTSCEEEEETTTTEEEE-EECCC-------SS-------------------------
T ss_pred eEEEEEECCCCCEEEEEc-----CCCeEEEEECCCCcEEE-EEccC-------CC-------------------------
Confidence 377899999999998543 23479999999986543 12211 00
Q ss_pred eeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEE
Q 003878 213 FFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILC 292 (789)
Q Consensus 213 ~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~ 292 (789)
....++|+|||+.|+....+ ..|++|++.++.. ...
T Consensus 167 -----------------------~v~~~~~~p~~~~l~s~s~d-------------------~~v~iwd~~~~~~--~~~ 202 (393)
T 1erj_A 167 -----------------------DIYSLDYFPSGDKLVSGSGD-------------------RTVRIWDLRTGQC--SLT 202 (393)
T ss_dssp -----------------------CEEEEEECTTSSEEEEEETT-------------------SEEEEEETTTTEE--EEE
T ss_pred -----------------------CEEEEEEcCCCCEEEEecCC-------------------CcEEEEECCCCee--EEE
Confidence 24789999999998765432 3588999876532 222
Q ss_pred EecCCCCeeEEEEEEec-CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEee-------ecccccee-
Q 003878 293 WKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL-------IDGFDAQY- 363 (789)
Q Consensus 293 ~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l-------~~~~~~~~- 363 (789)
+... ..+..+.++| ||++|+....+ ..|.++|+.++. ....+ ........
T Consensus 203 ~~~~---~~v~~~~~~~~~~~~l~~~s~d-----~~v~iwd~~~~~-------------~~~~~~~~~~~~~~h~~~v~~ 261 (393)
T 1erj_A 203 LSIE---DGVTTVAVSPGDGKYIAAGSLD-----RAVRVWDSETGF-------------LVERLDSENESGTGHKDSVYS 261 (393)
T ss_dssp EECS---SCEEEEEECSTTCCEEEEEETT-----SCEEEEETTTCC-------------EEEEEC------CCCSSCEEE
T ss_pred EEcC---CCcEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCc-------------EEEeecccccCCCCCCCCEEE
Confidence 3322 2355788999 89988876543 348888987742 11111 11111122
Q ss_pred EEEecCCCEEEEEECCCCCCceEEEEECCCCCC------------eEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEE
Q 003878 364 EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND------------WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYV 431 (789)
Q Consensus 364 ~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~------------~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~ 431 (789)
..|+|+|+.|+..+. +..|..+|+.+... ...+..+. ..+..+.+++++..+++...++ .
T Consensus 262 v~~~~~g~~l~s~s~----d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~sgs~D~--~ 333 (393)
T 1erj_A 262 VVFTRDGQSVVSGSL----DRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHK--DFVLSVATTQNDEYILSGSKDR--G 333 (393)
T ss_dssp EEECTTSSEEEEEET----TSEEEEEEC---------------CEEEEEECCS--SCEEEEEECGGGCEEEEEETTS--E
T ss_pred EEECCCCCEEEEEeC----CCEEEEEECCCCCCcccccCCCCCcceEEEeccc--CcEEEEEECCCCCEEEEEeCCC--e
Confidence 348999998765432 46788888865320 11222333 4567788888677888888887 7
Q ss_pred EEEEECCCCceeeecccCCeeEEEeeccc------CCcEEEEEEcCCCCCcEEEEEECC
Q 003878 432 LQIRDLKNGSLLHQLPIEIGSVNAISARR------EDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 432 L~~~dl~tG~~~~~l~~~~~~v~~~s~s~------d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
|++||+.+|+....+..+...+..+.+++ +++. +++.+. -..+..|++.
T Consensus 334 v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~-l~sgs~---Dg~i~iW~~~ 388 (393)
T 1erj_A 334 VLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNV-FATGSG---DCKARIWKYK 388 (393)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTCEE-EEEEET---TSEEEEEEEE
T ss_pred EEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCCCE-EEEECC---CCcEEECccc
Confidence 89999998887666665556666666554 4443 333322 3466666653
No 275
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.11 E-value=4.5e-08 Score=112.46 Aligned_cols=209 Identities=11% Similarity=-0.025 Sum_probs=126.2
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
..++++|||++.++++.. ...+|+++++.+.....+..... ..+..++.|||||++++.
T Consensus 282 v~~i~~s~~~~~~~vs~~------------------~~g~i~vvd~~~~~~l~~~~i~~---~~~~~~~~~spdg~~l~v 340 (543)
T 1nir_A 282 VAAIIASHEHPEFIVNVK------------------ETGKVLLVNYKDIDNLTVTSIGA---APFLHDGGWDSSHRYFMT 340 (543)
T ss_dssp EEEEEECSSSSEEEEEET------------------TTTEEEEEECTTSSSCEEEEEEC---CSSCCCEEECTTSCEEEE
T ss_pred eEEEEECCCCCEEEEEEC------------------CCCeEEEEEecCCCcceeEEecc---CcCccCceECCCCCEEEE
Confidence 467899999999887743 23468888887643222112222 122346789999999876
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecc----ccceeEEEecCCCEEEEEECCCCCCceEEEEECC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG----FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK 392 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~ 392 (789)
.... .+.|.++|+++++ ....+..+ .......++|+++.+|+..+.+ +..|.+++++
T Consensus 341 a~~~----~~~v~v~D~~tg~-------------l~~~i~~g~~ph~g~g~~~~~p~~g~~~~s~~~~--d~~V~v~d~~ 401 (543)
T 1nir_A 341 AANN----SNKVAVIDSKDRR-------------LSALVDVGKTPHPGRGANFVHPKYGPVWSTSHLG--DGSISLIGTD 401 (543)
T ss_dssp EEGG----GTEEEEEETTTTE-------------EEEEEECSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECC
T ss_pred EecC----CCeEEEEECCCCe-------------EEEeeccCCCCCCCCCcccCCCCCccEEEeccCC--CceEEEEEeC
Confidence 6532 3568899998852 11111111 1111233567777776655432 3578888887
Q ss_pred C-------CCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCC-----eEEEEEEECCCCcee-eecc--------cCCe
Q 003878 393 E-------PNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV-----KYVLQIRDLKNGSLL-HQLP--------IEIG 451 (789)
Q Consensus 393 ~-------~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g-----~~~L~~~dl~tG~~~-~~l~--------~~~~ 451 (789)
+ .+..+++-.+. .....+.+++++..+++...-+ ...|.+||+++++.. +.|. .+..
T Consensus 402 ~~~~~~~~~~~v~~l~~~g--~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~v~~~~~~~~~~~ 479 (543)
T 1nir_A 402 PKNHPQYAWKKVAELQGQG--GGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAKYQVLPIAEWADLGEGAK 479 (543)
T ss_dssp TTTCTTTBTSEEEEEECSC--SCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSCCEEECHHHHHCCCSSCC
T ss_pred CCCCchhcCeEEEEEEcCC--CCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCCeEEeechhhcccCCCCC
Confidence 6 22223332232 2234577777655444443111 237999999988764 3332 2234
Q ss_pred eEEEeecccCCcEEEEEEc-CCCCCcEEEEEECCCCC
Q 003878 452 SVNAISARREDSVVFISFT-SFLIPGIVYQCNLKTET 487 (789)
Q Consensus 452 ~v~~~s~s~d~~~l~~~~s-s~~~P~~ly~~dl~tg~ 487 (789)
.+..+.++++++.++++.- .-.....|..||.+|++
T Consensus 480 ~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~ 516 (543)
T 1nir_A 480 RVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLK 516 (543)
T ss_dssp EEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred ceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCce
Confidence 4557889999999998763 33567899999999986
No 276
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.11 E-value=8.1e-08 Score=103.73 Aligned_cols=165 Identities=11% Similarity=-0.033 Sum_probs=91.5
Q ss_pred eEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC----C-c-----EEEEecCCCCeeEEEEEEe
Q 003878 239 SIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS----E-D-----ILCWKDPEHPKYIFSGHVT 308 (789)
Q Consensus 239 ~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~----~-~-----~~~~~~~~~~~~~~~~~~S 308 (789)
.++|+|||+.|+++.. ....++++++..... + - ......+. ......+.||
T Consensus 159 ~~~~spdg~~l~~~~~------------------~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~s 219 (361)
T 3scy_A 159 CVRITPDGKYLLADDL------------------GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP-GSGPRHLIFN 219 (361)
T ss_dssp EEEECTTSSEEEEEET------------------TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT-TCCEEEEEEC
T ss_pred EEEECCCCCEEEEEeC------------------CCCEEEEEEEcCCCCcccccceeecccccceecCC-CCCCeEEEEc
Confidence 4899999999988743 223577777664432 1 0 01122222 1223578999
Q ss_pred cCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec---ccc-ceeEEEecCCCEEEEEECCCCCCc
Q 003878 309 EDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID---GFD-AQYEVIANDDTVFTFLTNKDAPKY 384 (789)
Q Consensus 309 pDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~---~~~-~~~~~~s~dG~~l~~~tn~~~~~~ 384 (789)
|||++|++.... ...|++++++++. ......+.. +.. .....|+|||++||+...... .
T Consensus 220 pdg~~l~v~~~~----~~~v~v~~~~~g~-----------~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~--~ 282 (361)
T 3scy_A 220 SDGKFAYLINEI----GGTVIAFRYADGM-----------LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKA--D 282 (361)
T ss_dssp TTSSEEEEEETT----TCEEEEEEEETTE-----------EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSS--C
T ss_pred CCCCEEEEEcCC----CCeEEEEEecCCc-----------eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCC--C
Confidence 999998876532 3568888876542 000111111 111 112448999999876543312 3
Q ss_pred eEEEEEC--CCCCCeEEe--ccCCCCceeeeEEEecCCE-EEEEEEeCCeEEEEEEECCCCce
Q 003878 385 KIIRVDL--KEPNDWFEV--IPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 385 ~L~~~dl--~~~~~~~~l--~~~~~~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl~tG~~ 442 (789)
.|.++++ .++. ++.+ ++. ......++++++++ |++....++.-.++.+|.++|+.
T Consensus 283 ~i~v~~~~~~~g~-~~~~~~~~~--g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 283 GVAIFKVDETNGT-LTKVGYQLT--GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp EEEEEEECTTTCC-EEEEEEEEC--SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEEEEEcCCCCc-EEEeeEecC--CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE
Confidence 4555554 4444 3222 222 23456788998655 55444455655666688877775
No 277
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.11 E-value=1.1e-08 Score=115.47 Aligned_cols=256 Identities=10% Similarity=-0.028 Sum_probs=143.9
Q ss_pred EEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccc
Q 003878 119 VLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLN 198 (789)
Q Consensus 119 ~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (789)
++++-.+++. .+.+++|||||+++| .++...+|+ |.++++.+.. |.+..+++..+|
T Consensus 7 ~~~~~~~~~~----~v~sv~~SpDG~~iA-----Sas~D~TV~--d~~~~~~l~g-----------h~~~v~~V~FsP-- 62 (588)
T 2j04_A 7 LLVDRKEFED----WKNNLTWARDGTLYL-----TTFPDISIG--QPKYAKDINC-----------NSKNLFHVKEFP-- 62 (588)
T ss_dssp EEECSCCCSS----SSCCEEECTTSCEEE-----ECSSSEEEE--EECCCSCCSS-----------BGGGTEEEEEEC--
T ss_pred hcccHhHhhc----cEEEEEECCCCCEEE-----EEcCCceee--cccccceecC-----------CCccEEEEEECC--
Confidence 3444444442 256789999999999 556667887 7666644321 112223333322
Q ss_pred ccccccccccccceeeEEEeeeccccceeeeeeec--------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCcccc
Q 003878 199 VPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVS--------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 270 (789)
Q Consensus 199 ~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~--------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~ 270 (789)
+| ..++..+|.... .-....++|||||+.|+....+.
T Consensus 63 --dg-------------------~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg-------------- 107 (588)
T 2j04_A 63 --LE-------------------FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNG-------------- 107 (588)
T ss_dssp --CC-------------------CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTS--------------
T ss_pred --CC-------------------CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCC--------------
Confidence 21 233334443221 11146899999999999775442
Q ss_pred CCcccEEEEEECCCCCCCcEEEEecCCCCe-----eEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccc
Q 003878 271 SNLYHEFYYHFLGTKQSEDILCWKDPEHPK-----YIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 345 (789)
Q Consensus 271 ~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~-----~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 345 (789)
.+.+|+..+ ++.... +.. .+.+++|||||++|+....+ ..|.++++.++......+
T Consensus 108 -----~V~iwd~~~------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~D-----GtVkIWd~~~~~l~~~~~-- 168 (588)
T 2j04_A 108 -----NVSVFKDNK------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNED-----GELQFFSIRKNSENTPEF-- 168 (588)
T ss_dssp -----CEEEEETTE------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETT-----SEEEEEECCCCTTTCCCC--
T ss_pred -----cEEEEeCCc------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCC-----CEEEEEECCCCccccccc--
Confidence 367777432 222211 221 36689999999999987643 458888988742100000
Q ss_pred cCCCCccEeeeccc----ccee-EEEecCCCEEEEEECCCCCCceEEEEECCCCCC---eEEeccCCCCceeeeEEEecC
Q 003878 346 RDGLLPFVKLIDGF----DAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND---WFEVIPEAERDVLESATAVNL 417 (789)
Q Consensus 346 ~~~~~~~~~l~~~~----~~~~-~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~---~~~l~~~~~~~~i~~v~~~~~ 417 (789)
..+..+.... ...+ ..|+||| ++..+. +..+..+++.++.. ++.+.+.. ...+.+++|+ +
T Consensus 169 ----i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~----D~tVrlWd~~~~~~~~~~~tL~~~h-~~~V~svaFs-g 236 (588)
T 2j04_A 169 ----YFESSIRLSDAGSKDWVTHIVWYEDV--LVAALS----NNSVFSMTVSASSHQPVSRMIQNAS-RRKITDLKIV-D 236 (588)
T ss_dssp ----EEEEEEECSCTTCCCCEEEEEEETTE--EEEEET----TCCEEEECCCSSSSCCCEEEEECCC-SSCCCCEEEE-T
T ss_pred ----eeeeeeecccccccccEEEEEEcCCc--EEEEeC----CCeEEEEECCCCccccceeeecccc-cCcEEEEEEE-C
Confidence 0012221111 1122 3499998 443332 35688899887651 23342222 3567889998 3
Q ss_pred CEEEEEEEeCCeEEEEEEECCCCceeeecc-cCCeeEEEeec--ccCCcEEEEEE
Q 003878 418 NQMIVSYLSDVKYVLQIRDLKNGSLLHQLP-IEIGSVNAISA--RREDSVVFISF 469 (789)
Q Consensus 418 ~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~-~~~~~v~~~s~--s~d~~~l~~~~ 469 (789)
..++. .. + ..|.+|++.+++. ..+. .....+..+.+ ++++..++.++
T Consensus 237 ~~LAS-a~-~--~tIkLWd~~~~~~-~~~~~gh~~~V~~va~~~s~d~~~La~a~ 286 (588)
T 2j04_A 237 YKVVL-TC-P--GYVHKIDLKNYSI-SSLKTGSLENFHIIPLNHEKESTILLMSN 286 (588)
T ss_dssp TEEEE-EC-S--SEEEEEETTTTEE-EEEECSCCSCCCEEEETTCSSCEEEEECS
T ss_pred CEEEE-Ee-C--CeEEEEECCCCeE-EEEEcCCCceEEEEEeeeCCCCCEEEEEc
Confidence 55544 43 3 3899999986554 2333 23555667788 88887666544
No 278
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.11 E-value=6.4e-09 Score=111.11 Aligned_cols=204 Identities=12% Similarity=0.102 Sum_probs=117.4
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCC----eeEEEEEEecCCc
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHP----KYIFSGHVTEDGQ 312 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~----~~~~~~~~SpDG~ 312 (789)
...++|+|||+.++++.. ...+|+++++.+... +........+ .....+.+||||+
T Consensus 45 ~~~~~~s~dg~~~~v~~~------------------~~~~i~~~d~~t~~~--~~~~~~~~~~~~~~~~~~~~~~spdg~ 104 (349)
T 1jmx_B 45 PGTAMMAPDNRTAYVLNN------------------HYGDIYGIDLDTCKN--TFHANLSSVPGEVGRSMYSFAISPDGK 104 (349)
T ss_dssp SCEEEECTTSSEEEEEET------------------TTTEEEEEETTTTEE--EEEEESCCSTTEEEECSSCEEECTTSS
T ss_pred CceeEECCCCCEEEEEeC------------------CCCcEEEEeCCCCcE--EEEEEcccccccccccccceEECCCCC
Confidence 367899999998887742 234688888876432 2222222110 1123578999999
Q ss_pred EEEEEEEcC-------CCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCce
Q 003878 313 YLVMCIEEN-------CDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYK 385 (789)
Q Consensus 313 ~l~~~~~~~-------~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~ 385 (789)
+|++...+. ......|+++|++++.. .................|+|||+ +|+. . ..
T Consensus 105 ~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~----------~~~~~~~~~~~~~~~~~~s~dg~-l~~~-~-----~~ 167 (349)
T 1jmx_B 105 EVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE----------AKPVRTFPMPRQVYLMRAADDGS-LYVA-G-----PD 167 (349)
T ss_dssp EEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG----------BCCSEEEECCSSCCCEEECTTSC-EEEE-S-----SS
T ss_pred EEEEEcccccccccccccCCCeEEEEECCCccc----------cceeeeccCCCcccceeECCCCc-EEEc-c-----Cc
Confidence 999876430 00125799999887421 01111111111112234899998 7663 1 23
Q ss_pred EEEEECCCCCCeEEeccCCC------------------------------------------------------------
Q 003878 386 IIRVDLKEPNDWFEVIPEAE------------------------------------------------------------ 405 (789)
Q Consensus 386 L~~~dl~~~~~~~~l~~~~~------------------------------------------------------------ 405 (789)
|+++|+++++ ....++...
T Consensus 168 i~~~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (349)
T 1jmx_B 168 IYKMDVKTGK-YTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH 246 (349)
T ss_dssp EEEECTTTCC-EEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEE
T ss_pred EEEEeCCCCc-eeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEE
Confidence 8888887765 222222110
Q ss_pred -------CceeeeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcE
Q 003878 406 -------RDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGI 477 (789)
Q Consensus 406 -------~~~i~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ 477 (789)
.....++.+++ ++..++.. ..+|++||+++++..+.+..+. .+..+.++++++.+++. + .-..
T Consensus 247 ~~~~~~~~~~~~~~~~sp~dg~~l~~~----~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~--~--~~~~ 317 (349)
T 1jmx_B 247 TQEFADLTELYFTGLRSPKDPNQIYGV----LNRLAKYDLKQRKLIKAANLDH-TYYCVAFDKKGDKLYLG--G--TFND 317 (349)
T ss_dssp EEEEEECSSCEEEEEECSSCTTEEEEE----ESEEEEEETTTTEEEEEEECSS-CCCEEEECSSSSCEEEE--S--BSSE
T ss_pred ecccccCCCcceeeEecCCCCCEEEEE----cCeEEEEECccCeEEEEEcCCC-CccceEECCCCCEEEEe--c--CCCe
Confidence 00112334445 54444333 3489999999887655655442 23467889999888763 2 2389
Q ss_pred EEEEECCCCC
Q 003878 478 VYQCNLKTET 487 (789)
Q Consensus 478 ly~~dl~tg~ 487 (789)
++.||+++++
T Consensus 318 v~v~d~~~~~ 327 (349)
T 1jmx_B 318 LAVFNPDTLE 327 (349)
T ss_dssp EEEEETTTTE
T ss_pred EEEEeccccc
Confidence 9999998884
No 279
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.11 E-value=1.7e-08 Score=108.25 Aligned_cols=236 Identities=12% Similarity=0.064 Sum_probs=150.1
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
..+..+.++|||++|+.+.. ...|++||+.+++.+... ... + -..+..+.|+++
T Consensus 75 ~~v~~~~~~~~~~~l~s~~~-----dg~i~iwd~~~~~~~~~~-~~~--------~----~v~~~~~~~~~~-------- 128 (369)
T 3zwl_B 75 GTIWSIDVDCFTKYCVTGSA-----DYSIKLWDVSNGQCVATW-KSP--------V----PVKRVEFSPCGN-------- 128 (369)
T ss_dssp SCEEEEEECTTSSEEEEEET-----TTEEEEEETTTCCEEEEE-ECS--------S----CEEEEEECTTSS--------
T ss_pred CcEEEEEEcCCCCEEEEEeC-----CCeEEEEECCCCcEEEEe-ecC--------C----CeEEEEEccCCC--------
Confidence 45788999999999985432 237999999998654311 110 0 011223345553
Q ss_pred eeeEEEeeeccc-----cceeeeeeeccc-----------------------ccceEEEEeCCcEEEEEEccCCCCCCCC
Q 003878 212 FFFFYLFSLVKS-----TIYSFWSVVSQF-----------------------KFSSIAWTHDSKGFFYSRYPAPKEGKDM 263 (789)
Q Consensus 212 ~~~~~~~~s~~~-----g~~~l~~~~~~~-----------------------~~~~~~wspDg~~i~y~~~~~~~~~~~~ 263 (789)
.++.+..+ |...+|.+...- ....++|+||++.|+....+
T Consensus 129 ----~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-------- 196 (369)
T 3zwl_B 129 ----YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKD-------- 196 (369)
T ss_dssp ----EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETT--------
T ss_pred ----EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCC--------
Confidence 44444444 777888776510 45678999999988876432
Q ss_pred CCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccc
Q 003878 264 DAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF 343 (789)
Q Consensus 264 ~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~ 343 (789)
..|+++++.+... ....+.. +...+..+.|+|||++|+.... ...|+++|+.++.
T Consensus 197 -----------g~i~i~d~~~~~~-~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~~~------ 251 (369)
T 3zwl_B 197 -----------GKISKYDVSNNYE-YVDSIDL--HEKSISDMQFSPDLTYFITSSR-----DTNSFLVDVSTLQ------ 251 (369)
T ss_dssp -----------SEEEEEETTTTTE-EEEEEEC--CSSCEEEEEECTTSSEEEEEET-----TSEEEEEETTTCC------
T ss_pred -----------CEEEEEECCCCcE-eEEEEec--CCCceeEEEECCCCCEEEEecC-----CceEEEEECCCCc------
Confidence 3588999876322 2223332 2334668999999999987653 3568999998742
Q ss_pred cccCCCCccEeeeccccceeEEEecCCCEEEEEECCCC----------CCceEEEEECCCCCCeEEeccCCCCceeeeEE
Q 003878 344 KKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDA----------PKYKIIRVDLKEPNDWFEVIPEAERDVLESAT 413 (789)
Q Consensus 344 ~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~----------~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~ 413 (789)
...............|+|+|+.+++.+..+. ....+..+|+.+++....+..+. ..+..+.
T Consensus 252 -------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~--~~v~~~~ 322 (369)
T 3zwl_B 252 -------VLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHF--GPLNTVA 322 (369)
T ss_dssp -------EEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCS--SCEEEEE
T ss_pred -------eeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheeccc--CcEEEEE
Confidence 1222222222223458999998887765431 22378888988876334443343 5688899
Q ss_pred EecCCEEEEEEEeCCeEEEEEEECCCCc
Q 003878 414 AVNLNQMIVSYLSDVKYVLQIRDLKNGS 441 (789)
Q Consensus 414 ~~~~~~lv~~~~~~g~~~L~~~dl~tG~ 441 (789)
+++++.++++...++ .|.+|+++++.
T Consensus 323 ~s~~~~~l~s~~~dg--~v~iw~~~~~~ 348 (369)
T 3zwl_B 323 ISPQGTSYASGGEDG--FIRLHHFEKSY 348 (369)
T ss_dssp ECTTSSEEEEEETTS--EEEEEEECHHH
T ss_pred ECCCCCEEEEEcCCC--eEEEEECcccc
Confidence 998777888888887 78888887543
No 280
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.10 E-value=1.6e-08 Score=106.92 Aligned_cols=223 Identities=11% Similarity=0.006 Sum_probs=143.4
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccce
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIF 212 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 212 (789)
.+..+.++|||++|+-+ +...+|++||+.+++.+. .+... .+
T Consensus 57 ~v~~~~~~~~~~~l~s~-----s~d~~i~vwd~~~~~~~~-~~~~h-------~~------------------------- 98 (304)
T 2ynn_A 57 PVRAGKFIARKNWIIVG-----SDDFRIRVFNYNTGEKVV-DFEAH-------PD------------------------- 98 (304)
T ss_dssp CEEEEEEEGGGTEEEEE-----ETTSEEEEEETTTCCEEE-EEECC-------SS-------------------------
T ss_pred cEEEEEEeCCCCEEEEE-----CCCCEEEEEECCCCcEEE-EEeCC-------CC-------------------------
Confidence 46788899999999854 334589999999997553 12211 00
Q ss_pred eeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEE
Q 003878 213 FFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILC 292 (789)
Q Consensus 213 ~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~ 292 (789)
....++|+||++.|+-...+ ..|.+|++.+.... ...
T Consensus 99 -----------------------~v~~~~~~~~~~~l~sgs~D-------------------~~v~lWd~~~~~~~-~~~ 135 (304)
T 2ynn_A 99 -----------------------YIRSIAVHPTKPYVLSGSDD-------------------LTVKLWNWENNWAL-EQT 135 (304)
T ss_dssp -----------------------CEEEEEECSSSSEEEEEETT-------------------SCEEEEEGGGTTEE-EEE
T ss_pred -----------------------cEEEEEEcCCCCEEEEECCC-------------------CeEEEEECCCCcch-hhh
Confidence 24789999999988755433 34888888654221 122
Q ss_pred EecCCCCeeEEEEEEec-CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc--cceeEEEec-
Q 003878 293 WKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF--DAQYEVIAN- 368 (789)
Q Consensus 293 ~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~s~- 368 (789)
+.. +...+..++|+| |++.|+..+. ...|.++|+.++. +...+..+. ......+++
T Consensus 136 ~~~--h~~~v~~v~~~p~~~~~l~sgs~-----D~~v~iwd~~~~~-------------~~~~~~~~~~~~v~~~~~~~~ 195 (304)
T 2ynn_A 136 FEG--HEHFVMCVAFNPKDPSTFASGCL-----DRTVKVWSLGQST-------------PNFTLTTGQERGVNYVDYYPL 195 (304)
T ss_dssp ECC--CCSCEEEEEECTTCTTEEEEEET-----TSEEEEEETTCSS-------------CSEEEECCCTTCEEEEEECCS
T ss_pred hcc--cCCcEEEEEECCCCCCEEEEEeC-----CCeEEEEECCCCC-------------ccceeccCCcCcEEEEEEEEc
Confidence 332 344567899999 5677765443 3458889987632 112222211 112223554
Q ss_pred -CCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecc
Q 003878 369 -DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP 447 (789)
Q Consensus 369 -dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~ 447 (789)
++..|+..+ .+..|..+|+.+++....+..+. ..+..+.+++++.++++...++ .|.+||+.+++..+.+.
T Consensus 196 ~~~~~l~s~s----~D~~i~iWd~~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~s~s~Dg--~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 196 PDKPYMITAS----DDLTIKIWDYQTKSCVATLEGHM--SNVSFAVFHPTLPIIISGSEDG--TLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp TTCCEEEEEE----TTSEEEEEETTTTEEEEEEECCS--SCEEEEEECSSSSEEEEEETTS--CEEEEETTTCCEEEEEC
T ss_pred CCCCEEEEEc----CCCeEEEEeCCCCccceeeCCCC--CCEEEEEECCCCCEEEEEcCCC--eEEEEECCCCceeeecc
Confidence 566665433 24679999998876334444443 4577888888777888888887 68999999888767776
Q ss_pred cCCeeEEEeecccCCcE
Q 003878 448 IEIGSVNAISARREDSV 464 (789)
Q Consensus 448 ~~~~~v~~~s~s~d~~~ 464 (789)
.+...+..+++.|++..
T Consensus 268 ~~~~~~~~~~~~~~~~~ 284 (304)
T 2ynn_A 268 VGLERSWCIATHPTGRK 284 (304)
T ss_dssp CSSSSEEEEEECTTCGG
T ss_pred CCCccEEEEEECCCCCc
Confidence 65555666777777654
No 281
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.10 E-value=7.8e-09 Score=111.50 Aligned_cols=243 Identities=9% Similarity=-0.011 Sum_probs=150.8
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCc--eecccccccccccccCccceeeeeecccccccccccccccc
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI--VEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRG 210 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 210 (789)
.+..+++||||++||.+.. ...|++||+.+++ .+. .+... .+
T Consensus 10 ~i~~~~~s~~~~~l~~~~~-----d~~v~i~~~~~~~~~~~~-~~~~h-------~~----------------------- 53 (372)
T 1k8k_C 10 PISCHAWNKDRTQIAICPN-----NHEVHIYEKSGNKWVQVH-ELKEH-------NG----------------------- 53 (372)
T ss_dssp CCCEEEECTTSSEEEEECS-----SSEEEEEEEETTEEEEEE-EEECC-------SS-----------------------
T ss_pred CeEEEEECCCCCEEEEEeC-----CCEEEEEeCCCCcEEeee-eecCC-------CC-----------------------
Confidence 3677899999999986532 3479999999885 221 12111 00
Q ss_pred ceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcE
Q 003878 211 IFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDI 290 (789)
Q Consensus 211 ~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~ 290 (789)
....++|+|||+.|+....+ ..|++|++.+....
T Consensus 54 -------------------------~v~~~~~~~~~~~l~~~~~d-------------------g~i~vwd~~~~~~~-- 87 (372)
T 1k8k_C 54 -------------------------QVTGVDWAPDSNRIVTCGTD-------------------RNAYVWTLKGRTWK-- 87 (372)
T ss_dssp -------------------------CEEEEEEETTTTEEEEEETT-------------------SCEEEEEEETTEEE--
T ss_pred -------------------------cccEEEEeCCCCEEEEEcCC-------------------CeEEEEECCCCeee--
Confidence 25789999999999876432 24778887554321
Q ss_pred EEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecc-ccc-eeEEEec
Q 003878 291 LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG-FDA-QYEVIAN 368 (789)
Q Consensus 291 ~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~-~~~-~~~~~s~ 368 (789)
.......+...+..+.|+|||++|+....+ ..+.++++.++.. .......... ... ....|+|
T Consensus 88 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----~~v~i~d~~~~~~----------~~~~~~~~~~~~~~i~~~~~~~ 152 (372)
T 1k8k_C 88 PTLVILRINRAARCVRWAPNEKKFAVGSGS-----RVISICYFEQEND----------WWVCKHIKKPIRSTVLSLDWHP 152 (372)
T ss_dssp EEEECCCCSSCEEEEEECTTSSEEEEEETT-----SSEEEEEEETTTT----------EEEEEEECTTCCSCEEEEEECT
T ss_pred eeEEeecCCCceeEEEECCCCCEEEEEeCC-----CEEEEEEecCCCc----------ceeeeeeecccCCCeeEEEEcC
Confidence 122222233446789999999999877643 2366666665310 0001111111 111 1234899
Q ss_pred CCCEEEEEECCCCCCceEEEEECC------------------CCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeE
Q 003878 369 DDTVFTFLTNKDAPKYKIIRVDLK------------------EPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKY 430 (789)
Q Consensus 369 dG~~l~~~tn~~~~~~~L~~~dl~------------------~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~ 430 (789)
+++.|+..+. ++.|..+|+. .+.....+..+ ...+..+.+++++.++++...++
T Consensus 153 ~~~~l~~~~~----dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~~~d~-- 224 (372)
T 1k8k_C 153 NSVLLAAGSC----DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSS--CGWVHGVCFSANGSRVAWVSHDS-- 224 (372)
T ss_dssp TSSEEEEEET----TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCC--SSCEEEEEECSSSSEEEEEETTT--
T ss_pred CCCEEEEEcC----CCCEEEEEcccccccccccccccccccchhhheEecCCC--CCeEEEEEECCCCCEEEEEeCCC--
Confidence 9988776543 3568888853 23312222222 35678899988666777777776
Q ss_pred EEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCC
Q 003878 431 VLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 485 (789)
Q Consensus 431 ~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~t 485 (789)
.|.+||+.+++.+..+..+...+..+.+++++..++.. .-..++.|++.+
T Consensus 225 ~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-----~d~~i~i~~~~~ 274 (372)
T 1k8k_C 225 TVCLADADKKMAVATLASETLPLLAVTFITESSLVAAG-----HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEEGGGTTEEEEEECSSCCEEEEEEEETTEEEEEE-----TTSSCEEEEEET
T ss_pred EEEEEECCCCceeEEEccCCCCeEEEEEecCCCEEEEE-----eCCeEEEEEccC
Confidence 79999998888766776666677788899988755432 234667777766
No 282
>2h7c_A Liver carboxylesterase 1; enzyme, cholesteryl esterase, hydrolase; HET: NAG NDG SIA COA; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 2dqy_A* 2dr0_A* 2dqz_A* 1mx1_A* 1mx5_A* 1mx9_A* 4ab1_A* 1ya4_A* 1yah_A* 1yaj_A* 1ya8_A* 2hrr_A* 2hrq_A* 3k9b_A* 1k4y_A*
Probab=99.10 E-value=1.1e-10 Score=133.62 Aligned_cols=133 Identities=17% Similarity=0.128 Sum_probs=94.5
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCC-CCCHHHHHHHHcCCeEEEEEeecC-CCCCChhHHhcccc
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-SFSVSRTILMRHLGAVFCIANIRG-GGEYGEEWHKGGAL 592 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~RG-~g~~g~~~~~~~~~ 592 (789)
+.|. . .+.++.|++...+++.|+||++|||....... .|... .++.+.|++|+.+|||- ..+|+..... .
T Consensus 95 ~edc-l--~lnv~~P~~~~~~~~~Pv~v~iHGG~~~~g~~~~~~~~--~la~~~g~vvv~~nYRlg~~gf~~~~~~---~ 166 (542)
T 2h7c_A 95 SEDC-L--YLNIYTPADLTKKNRLPVMVWIHGGGLMVGAASTYDGL--ALAAHENVVVVTIQYRLGIWGFFSTGDE---H 166 (542)
T ss_dssp ESCC-C--EEEEEECSCTTSCCCEEEEEEECCSTTTSCCSTTSCCH--HHHHHHTCEEEEECCCCHHHHHCCCSST---T
T ss_pred CCCC-c--EEEEEECCCCCCCCCCCEEEEECCCcccCCCccccCHH--HHHhcCCEEEEecCCCCccccCCCCCcc---c
Confidence 5676 4 44577888754457899999999986443332 24432 35555799999999993 2222221111 1
Q ss_pred cCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHh--CCCceeEEEecCCcccc
Q 003878 593 AKKQNCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVMDM 655 (789)
Q Consensus 593 ~~~~~~~~D~~~~~~~L~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~--~pd~f~a~v~~~p~~d~ 655 (789)
..+...+.|.+++++|+.++ -..||+||.|+|+|+||.+++.++.. .+.+|+++|+++|....
T Consensus 167 ~~~n~gl~D~~~al~wv~~ni~~fggDp~~Vtl~G~SaGg~~~~~~~~~~~~~~lf~~ai~~Sg~~~~ 234 (542)
T 2h7c_A 167 SRGNWGHLDQVAALRWVQDNIASFGGNPGSVTIFGESAGGESVSVLVLSPLAKNLFHRAISESGVALT 234 (542)
T ss_dssp CCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTSCSEEEEESCCTTC
T ss_pred CccchhHHHHHHHHHHHHHHHHHcCCCccceEEEEechHHHHHHHHHhhhhhhHHHHHHhhhcCCccC
Confidence 22334578999999999875 24699999999999999999998876 36799999999997664
No 283
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.09 E-value=2.3e-08 Score=106.37 Aligned_cols=213 Identities=10% Similarity=0.048 Sum_probs=115.6
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC-CcEEEEecCCCCeeEEEEEEecCCcEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS-EDILCWKDPEHPKYIFSGHVTEDGQYLV 315 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~SpDG~~l~ 315 (789)
...++|+|||+.|+++... ...|+++++..+.. +......... ....+.|+|||++|+
T Consensus 86 ~~~~~~s~dg~~l~~~~~~------------------~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~ 144 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYN------------------AGNVSVTRLEDGLPVGVVDVVEGLD---GCHSANISPDNRTLW 144 (343)
T ss_dssp CSEEEECTTSSEEEEEETT------------------TTEEEEEEEETTEEEEEEEEECCCT---TBCCCEECTTSSEEE
T ss_pred CcEEEEcCCCCEEEEEecC------------------CCeEEEEECCCCccccccccccCCC---CceEEEECCCCCEEE
Confidence 4789999999999887432 23477777642111 1111222211 134578999999997
Q ss_pred EEEEcCCCCceEEEEEECCC-CCCCcccccccCCCCccE--eee--ccccceeEEEecCCCEEEEEECCCCCCceEEEEE
Q 003878 316 MCIEENCDPVNKVYYCDLSA-LPEGLEGFKKRDGLLPFV--KLI--DGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVD 390 (789)
Q Consensus 316 ~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~--~l~--~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~d 390 (789)
+.... ...|+++++.+ +. ..... ... .+.......|+|+|+.+++.... ...|..++
T Consensus 145 ~~~~~----~~~v~~~d~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~---~~~i~~~~ 206 (343)
T 1ri6_A 145 VPALK----QDRICLFTVSDDGH-----------LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNEL---NSSVDVWE 206 (343)
T ss_dssp EEEGG----GTEEEEEEECTTSC-----------EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETT---TTEEEEEE
T ss_pred EecCC----CCEEEEEEecCCCc-----------eeeecccccccCCCCCcceEEECCCCCEEEEEeCC---CCEEEEEE
Confidence 76522 35688888875 31 00000 111 11122234589999988876543 35788888
Q ss_pred CCC--CCC--eEEe--ccCC--CCceeeeEEEecCC-EEEEEEEeCCeEEEEEEECC--CCce--eeecccCCeeEEEee
Q 003878 391 LKE--PND--WFEV--IPEA--ERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLK--NGSL--LHQLPIEIGSVNAIS 457 (789)
Q Consensus 391 l~~--~~~--~~~l--~~~~--~~~~i~~v~~~~~~-~lv~~~~~~g~~~L~~~dl~--tG~~--~~~l~~~~~~v~~~s 457 (789)
++. +.. ...+ ++.. .......+.+++++ .+++....++ .|.+|+++ +++. ...+.... .+..++
T Consensus 207 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~--~i~v~d~~~~~~~~~~~~~~~~~~-~~~~~~ 283 (343)
T 1ri6_A 207 LKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTAS--LITVFSVSEDGSVLSKEGFQPTET-QPRGFN 283 (343)
T ss_dssp SSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTT--EEEEEEECTTSCCEEEEEEEECSS-SCCCEE
T ss_pred ecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCC--EEEEEEEcCCCCceEEeeeecCCC-ccceEE
Confidence 753 330 1111 1211 11234568888865 4555444444 68888876 3432 22222222 255678
Q ss_pred cccCCcEEEEEEcCCCCCcEEEEEECCCCCceEEEee
Q 003878 458 ARREDSVVFISFTSFLIPGIVYQCNLKTETPEMKIFR 494 (789)
Q Consensus 458 ~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~~~~~~l~ 494 (789)
++++++.++++.. ....-.+|.+|..+++ .+.+.
T Consensus 284 ~s~dg~~l~~~~~-~~~~v~v~~~d~~~g~--~~~~~ 317 (343)
T 1ri6_A 284 VDHSGKYLIAAGQ-KSHHISVYEIVGEQGL--LHEKG 317 (343)
T ss_dssp ECTTSSEEEEECT-TTCEEEEEEEETTTTE--EEEEE
T ss_pred ECCCCCEEEEecC-CCCeEEEEEEcCCCce--eeEcc
Confidence 8999997776542 2223344445766773 44443
No 284
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.08 E-value=6.9e-08 Score=102.16 Aligned_cols=262 Identities=11% Similarity=0.026 Sum_probs=149.3
Q ss_pred CCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceec---ccccccccccccCccceeeeeeccccccccccc
Q 003878 129 DGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA---DALSWVCFCFSHSFGYFFHLTISLLNVPTYKLF 205 (789)
Q Consensus 129 ~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 205 (789)
++...+..+++||||++||.+.. ..+|++||+.++.... ..+... .+
T Consensus 9 gH~~~v~~~~~~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~-------~~------------------ 58 (351)
T 3f3f_A 9 GHDDLVHDVVYDFYGRHVATCSS-----DQHIKVFKLDKDTSNWELSDSWRAH-------DS------------------ 58 (351)
T ss_dssp CCSSCEEEEEECSSSSEEEEEET-----TSEEEEEEECSSSCCEEEEEEEECC-------SS------------------
T ss_pred ccccceeEEEEcCCCCEEEEeeC-----CCeEEEEECCCCCCcceecceeccC-------CC------------------
Confidence 34456889999999999985432 3489999999774221 111111 00
Q ss_pred cccccceeeEEEeeeccccceeeeeeecccccceEEEEe--CCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECC
Q 003878 206 LYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTH--DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLG 283 (789)
Q Consensus 206 ~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wsp--Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg 283 (789)
....++|+| |++.|+....+ ..|.+|++.
T Consensus 59 ------------------------------~v~~~~~~~~~d~~~l~s~~~d-------------------g~v~vwd~~ 89 (351)
T 3f3f_A 59 ------------------------------SIVAIDWASPEYGRIIASASYD-------------------KTVKLWEED 89 (351)
T ss_dssp ------------------------------CEEEEEECCGGGCSEEEEEETT-------------------SCEEEEEEC
T ss_pred ------------------------------cEEEEEEcCCCCCCEEEEEcCC-------------------CeEEEEecC
Confidence 257899999 68888766433 247888886
Q ss_pred CCCCCc-----EEEEecCCCCeeEEEEEEecC--CcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee
Q 003878 284 TKQSED-----ILCWKDPEHPKYIFSGHVTED--GQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI 356 (789)
Q Consensus 284 ~~~~~~-----~~~~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~ 356 (789)
++.... ..+.....+...+..+.|+|+ |++|+.... ...|.++|+.++... ..+.... ........
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~-----dg~v~iwd~~~~~~~-~~~~~~~-~~~~~~~~ 162 (351)
T 3f3f_A 90 PDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN-----DGILRLYDALEPSDL-RSWTLTS-EMKVLSIP 162 (351)
T ss_dssp TTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET-----TCEEEEEECSSTTCT-TCCEEEE-EEESCSCC
T ss_pred CCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecC-----CCcEEEecCCChHHh-ccccccc-cccccccc
Confidence 653211 222222233445678999999 999887653 356899998874211 0000000 00000000
Q ss_pred --ccc-cceeEEEecC---CCEEEEEECCCCCCceEEEEECCCCCCeEEecc-CCCCceeeeEEEecCC----EEEEEEE
Q 003878 357 --DGF-DAQYEVIAND---DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP-EAERDVLESATAVNLN----QMIVSYL 425 (789)
Q Consensus 357 --~~~-~~~~~~~s~d---G~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~-~~~~~~i~~v~~~~~~----~lv~~~~ 425 (789)
... ......|+|+ ++.++..+.. ..+...+...+. ...+.. ......+..+.+++++ .++++..
T Consensus 163 ~~~~~~~~~~~~~~p~~~~~~~l~~~~~~----~~~~~~~~~~~~-~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~ 237 (351)
T 3f3f_A 163 PANHLQSDFCLSWCPSRFSPEKLAVSALE----QAIIYQRGKDGK-LHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGC 237 (351)
T ss_dssp CSSCSCCCEEEEECCCSSSCCEEEEEETT----EEEEEEECTTSC-EEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEE
T ss_pred cCCcccceeEEEeccCCCCCcEEEEecCC----CcEEEEccCCCc-eeeeeecCCCCcceeEEEECCCCCCcceEEEEEc
Confidence 000 1112337776 6766654432 345555555444 221211 1123568889999865 7888888
Q ss_pred eCCeEEEEEEECCCC----------------------------------------------ceeeecccCCeeEEEeecc
Q 003878 426 SDVKYVLQIRDLKNG----------------------------------------------SLLHQLPIEIGSVNAISAR 459 (789)
Q Consensus 426 ~~g~~~L~~~dl~tG----------------------------------------------~~~~~l~~~~~~v~~~s~s 459 (789)
.++ .|++||+.++ +....+..+...+..+.++
T Consensus 238 ~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s 315 (351)
T 3f3f_A 238 KDG--RIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWN 315 (351)
T ss_dssp TTS--CEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEEC
T ss_pred CCC--eEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEc
Confidence 887 5777777643 1222223334567788889
Q ss_pred cCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 460 REDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 460 ~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
++++.++... .-+.+..|++.+++
T Consensus 316 ~~~~~l~s~~----~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 316 LTGTILSSAG----DDGKVRLWKATYSN 339 (351)
T ss_dssp SSSCCEEEEE----TTSCEEEEEECTTS
T ss_pred CCCCEEEEec----CCCcEEEEecCcCc
Confidence 9887555332 23578888887764
No 285
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.07 E-value=3.9e-08 Score=108.14 Aligned_cols=243 Identities=12% Similarity=0.045 Sum_probs=154.2
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
..+..++|||||++||.+.. . ..|++||+.+++.+. .+.... +
T Consensus 135 ~~v~~v~~s~~~~~l~~~~~-d----g~i~iwd~~~~~~~~-~~~~~~-------~------------------------ 177 (401)
T 4aez_A 135 TYVASVKWSHDGSFLSVGLG-N----GLVDIYDVESQTKLR-TMAGHQ-------A------------------------ 177 (401)
T ss_dssp CCEEEEEECTTSSEEEEEET-T----SCEEEEETTTCCEEE-EECCCS-------S------------------------
T ss_pred CCEEEEEECCCCCEEEEECC-C----CeEEEEECcCCeEEE-EecCCC-------C------------------------
Confidence 35788999999999987553 2 379999999986553 121110 0
Q ss_pred eeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEE
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDIL 291 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~ 291 (789)
....++| +++.|+.... ...|++|++.+... ...
T Consensus 178 ------------------------~v~~~~~--~~~~l~~~~~-------------------dg~i~i~d~~~~~~-~~~ 211 (401)
T 4aez_A 178 ------------------------RVGCLSW--NRHVLSSGSR-------------------SGAIHHHDVRIANH-QIG 211 (401)
T ss_dssp ------------------------CEEEEEE--ETTEEEEEET-------------------TSEEEEEETTSSSC-EEE
T ss_pred ------------------------ceEEEEE--CCCEEEEEcC-------------------CCCEEEEecccCcc-eee
Confidence 2467788 5666665532 24688999875432 223
Q ss_pred EEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEEecCC
Q 003878 292 CWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDD 370 (789)
Q Consensus 292 ~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dG 370 (789)
.+.. +...+..+.|+|||++|+....+ ..|.++|+.++. +...+..... .....|+|++
T Consensus 212 ~~~~--~~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~-------------~~~~~~~~~~~v~~~~~~p~~ 271 (401)
T 4aez_A 212 TLQG--HSSEVCGLAWRSDGLQLASGGND-----NVVQIWDARSSI-------------PKFTKTNHNAAVKAVAWCPWQ 271 (401)
T ss_dssp EEEC--CSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTCSS-------------EEEEECCCSSCCCEEEECTTS
T ss_pred EEcC--CCCCeeEEEEcCCCCEEEEEeCC-----CeEEEccCCCCC-------------ccEEecCCcceEEEEEECCCC
Confidence 3333 33446789999999999876643 448899998742 1222222111 1224589988
Q ss_pred CEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEE--eCCeEEEEEEECCCCceeee--c
Q 003878 371 TVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL--SDVKYVLQIRDLKNGSLLHQ--L 446 (789)
Q Consensus 371 ~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~--~~g~~~L~~~dl~tG~~~~~--l 446 (789)
..+++.... ..+..|..+|+.+++... .+... ..+..+.+++++..++... .++ .|.+|++.+++.... +
T Consensus 272 ~~ll~~~~g-s~d~~i~i~d~~~~~~~~-~~~~~--~~v~~~~~s~~~~~l~~~~g~~dg--~i~v~~~~~~~~~~~~~~ 345 (401)
T 4aez_A 272 SNLLATGGG-TMDKQIHFWNAATGARVN-TVDAG--SQVTSLIWSPHSKEIMSTHGFPDN--NLSIWSYSSSGLTKQVDI 345 (401)
T ss_dssp TTEEEEECC-TTTCEEEEEETTTCCEEE-EEECS--SCEEEEEECSSSSEEEEEECTTTC--EEEEEEEETTEEEEEEEE
T ss_pred CCEEEEecC-CCCCEEEEEECCCCCEEE-EEeCC--CcEEEEEECCCCCeEEEEeecCCC--cEEEEecCCccceeEEEe
Confidence 877765531 235789999998876333 33332 4578899998666666654 454 788899886654333 3
Q ss_pred ccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 447 PIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 447 ~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
....+.+..+.+++++..++.. ..-+.+..|++.+++
T Consensus 346 ~~h~~~v~~~~~s~dg~~l~s~----~~dg~i~iw~~~~~~ 382 (401)
T 4aez_A 346 PAHDTRVLYSALSPDGRILSTA----ASDENLKFWRVYDGD 382 (401)
T ss_dssp ECCSSCCCEEEECTTSSEEEEE----CTTSEEEEEECCC--
T ss_pred cCCCCCEEEEEECCCCCEEEEE----eCCCcEEEEECCCCc
Confidence 3345567778899999866643 234789999998874
No 286
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.07 E-value=2.3e-08 Score=107.58 Aligned_cols=242 Identities=9% Similarity=0.001 Sum_probs=145.0
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
+...+..+++||||++|+- |+...+|++||+.+++.+. .+... .+
T Consensus 75 h~~~V~~~~~~~~~~~l~s-----~s~D~~v~lwd~~~~~~~~-~~~~h-------~~---------------------- 119 (343)
T 2xzm_R 75 HNHFVSDLALSQENCFAIS-----SSWDKTLRLWDLRTGTTYK-RFVGH-------QS---------------------- 119 (343)
T ss_dssp CSSCEEEEEECSSTTEEEE-----EETTSEEEEEETTSSCEEE-EEECC-------CS----------------------
T ss_pred CCCceEEEEECCCCCEEEE-----EcCCCcEEEEECCCCcEEE-EEcCC-------CC----------------------
Confidence 3345788999999999873 3334589999999986543 12211 00
Q ss_pred cceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCc
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED 289 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~ 289 (789)
....++|+|||+.|+....+ ..|.+|++... .
T Consensus 120 --------------------------~v~~v~~sp~~~~l~s~~~d-------------------~~i~~wd~~~~---~ 151 (343)
T 2xzm_R 120 --------------------------EVYSVAFSPDNRQILSAGAE-------------------REIKLWNILGE---C 151 (343)
T ss_dssp --------------------------CEEEEEECSSTTEEEEEETT-------------------SCEEEEESSSC---E
T ss_pred --------------------------cEEEEEECCCCCEEEEEcCC-------------------CEEEEEeccCC---c
Confidence 25789999999998865432 34788887521 1
Q ss_pred EEEEe-cCCCCeeEEEEEEecCC----------cEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecc
Q 003878 290 ILCWK-DPEHPKYIFSGHVTEDG----------QYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG 358 (789)
Q Consensus 290 ~~~~~-~~~~~~~~~~~~~SpDG----------~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~ 358 (789)
..... ...+...+..+.|+|++ .+++.... ...|.++|.... ....+...
T Consensus 152 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~-----d~~i~iwd~~~~--------------~~~~~~~h 212 (343)
T 2xzm_R 152 KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGW-----DGRLKVWNTNFQ--------------IRYTFKAH 212 (343)
T ss_dssp EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEET-----TSEEEEEETTTE--------------EEEEEECC
T ss_pred eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcC-----CCEEEEEcCCCc--------------eeEEEcCc
Confidence 11111 11234456788999998 55654432 345888884321 11112211
Q ss_pred ccce-eEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEEC
Q 003878 359 FDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDL 437 (789)
Q Consensus 359 ~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl 437 (789)
.... ...|+|+|+.|+..+ .+..|..+|+.........+... ..+..+++++++.+++...++ .|++|++
T Consensus 213 ~~~v~~~~~s~~g~~l~sgs----~dg~v~iwd~~~~~~~~~~~~~~--~~v~~v~~sp~~~~la~~~d~---~v~iw~~ 283 (343)
T 2xzm_R 213 ESNVNHLSISPNGKYIATGG----KDKKLLIWDILNLTYPQREFDAG--STINQIAFNPKLQWVAVGTDQ---GVKIFNL 283 (343)
T ss_dssp SSCEEEEEECTTSSEEEEEE----TTCEEEEEESSCCSSCSEEEECS--SCEEEEEECSSSCEEEEEESS---CEEEEES
T ss_pred cccceEEEECCCCCEEEEEc----CCCeEEEEECCCCcccceeecCC--CcEEEEEECCCCCEEEEECCC---CEEEEEe
Confidence 1112 234899999877543 24679999984432112222222 347889999866666655443 4889998
Q ss_pred CCCceee--ecc-----------cCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 438 KNGSLLH--QLP-----------IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 438 ~tG~~~~--~l~-----------~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
.+++... .+. .....+..++++|+++.++... .-+.+..|++.++
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~sg~----~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 284 MTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALGKKLFAGF----TDGVIRTFSFETS 341 (343)
T ss_dssp SSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSSCCEEEEE----TTSEEEEEEEEEE
T ss_pred CCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCCCeEEEec----CCceEEEEEEEcc
Confidence 7665422 222 1234577889999998776432 2357888887554
No 287
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=99.07 E-value=3e-08 Score=104.64 Aligned_cols=225 Identities=11% Similarity=0.076 Sum_probs=145.7
Q ss_pred eEeCCEEEEEEEcCCC---------CeeEEEEecCCCCCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEE-ecCCce
Q 003878 87 FKRGNKYFYFHNTGLQ---------PQSVLYVQDSLDAKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYAL-SYSGSD 156 (789)
Q Consensus 87 ~~~g~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~-~~~g~~ 156 (789)
..+|+++||.....+. .+..||+.+..+++.++|.+.. ...+||+|++|+|+. +..+
T Consensus 61 ~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~-----------~~~~s~~g~~Iy~~~~~~~~-- 127 (302)
T 3s25_A 61 NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDP-----------CIYASLIGNYIYYLHYDTQT-- 127 (302)
T ss_dssp EECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSC-----------EEEEEEETTEEEEEEESSSS--
T ss_pred EEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCC-----------ccEEEEeCCEEEEEeecCCC--
Confidence 4689999999876431 1456888876545545554422 126889999999986 2233
Q ss_pred EEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEEeeeccccceeeeeeecccc
Q 003878 157 WATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFK 236 (789)
Q Consensus 157 ~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~ 236 (789)
...|+.+++.+.... .+...
T Consensus 128 ~~~Iy~~~~dGs~~~--~lt~~---------------------------------------------------------- 147 (302)
T 3s25_A 128 ATSLYRIRIDGEEKK--KIKNH---------------------------------------------------------- 147 (302)
T ss_dssp CEEEEEEETTSCCCE--EEESS----------------------------------------------------------
T ss_pred CceEEEEECCCCCeE--EEeCC----------------------------------------------------------
Confidence 468999999865432 12221
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...+|+|||+.|||+.. ...+|++.++.+... ..+++. ..+ . .++|+|++|++
T Consensus 148 -~~~~~~~~g~~iy~t~~------------------g~~~Iy~~~l~g~~~--~~l~~~---~~~--~-~~~P~g~~iy~ 200 (302)
T 3s25_A 148 -YLFTCNTSDRYFYYNNP------------------KNGQLYRYDTASQSE--ALFYDC---NCY--K-PVVLDDTNVYY 200 (302)
T ss_dssp -CCCCSEEETTEEEEECT------------------TTCCEEEEETTTTEE--EEEECS---CEE--E-EEEEETTEEEE
T ss_pred -CceEeeEECCEEEEEeC------------------CCceEEEEECCCCCE--EEEeCC---Ccc--c-eeeecCCEEEE
Confidence 11346889999999832 234699999876543 344542 222 2 35699999998
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND 396 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~ 396 (789)
+.... ...|+.++++++. ...++.. ..+.++|+|+.||+.++.. ...|+++++++..
T Consensus 201 t~~~~---~~~I~~~~ldG~~--------------~~~Lt~~---~~~~~~~~g~~Iy~~~~~~--~~~i~~~~~DG~~- 257 (302)
T 3s25_A 201 MDVNR---DNAIVHVNINNPN--------------PVVLTEA---NIEHYNVYGSLIFYQRGGD--NPALCVVKNDGTG- 257 (302)
T ss_dssp EEGGG---TTEEEEECSSSCC--------------CEECSCS---CEEEEEEETTEEEEEECSS--SCEEEEEETTSCC-
T ss_pred EEcCC---CcEEEEEECCCCC--------------eEEEeCC---CcceEEECCCEEEEEECCC--CcEEEEEECCCCc-
Confidence 76432 2679999998742 2334332 1245889999999887653 3799999999876
Q ss_pred eEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCce
Q 003878 397 WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 397 ~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~ 442 (789)
.+.|. .. .+..+.++. ++++++....+ .|++++++ |..
T Consensus 258 r~~l~-~~---~~~~i~i~~-d~Iy~td~~~~--~i~~~~~d-Gs~ 295 (302)
T 3s25_A 258 FKELA-KG---EFCNINVTS-QYVYFTDFVSN--KEYCTSTQ-NPD 295 (302)
T ss_dssp CEEEE-ES---CEEEEEECS-SEEEEEETTTC--CEEEEESS-SCC
T ss_pred cEEee-CC---ccceEEEeC-CEEEEEECCCC--eEEEEECC-CCC
Confidence 34443 32 144677776 88888765444 48888876 543
No 288
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.07 E-value=5.6e-08 Score=103.28 Aligned_cols=283 Identities=9% Similarity=0.089 Sum_probs=160.3
Q ss_pred CCcEEEEeEEeCCC-CcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccc
Q 003878 129 DGTAALIKVSVSED-AKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLY 207 (789)
Q Consensus 129 ~~~~~~~~~~~SpD-g~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 207 (789)
++...|..+++||| |++|| + |+...+|+|||+.+++......... +..+.+. ..+..+.|++
T Consensus 36 GH~~~V~~v~~sp~~~~~l~-S----~s~D~~i~vWd~~~~~~~~~~~~~~---l~~h~~~----V~~~~~s~dg----- 98 (340)
T 4aow_A 36 GHNGWVTQIATTPQFPDMIL-S----ASRDKTIIMWKLTRDETNYGIPQRA---LRGHSHF----VSDVVISSDG----- 98 (340)
T ss_dssp CCSSCEEEEEECTTCTTEEE-E----EETTSCEEEEEECCSSSCSEEEEEE---ECCCSSC----EEEEEECTTS-----
T ss_pred CccCCEEEEEEeCCCCCEEE-E----EcCCCeEEEEECCCCCcccceeeEE---EeCCCCC----EEEEEECCCC-----
Confidence 45566889999998 56665 3 2334479999998764321000000 0011111 1122234565
Q ss_pred cccceeeEEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEE
Q 003878 208 LRGIFFFFYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEF 277 (789)
Q Consensus 208 ~~~~~~~~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i 277 (789)
++++++..+|...+|.... .-......++++++.|+....+ ..+
T Consensus 99 -------~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d-------------------~~~ 152 (340)
T 4aow_A 99 -------QFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRD-------------------KTI 152 (340)
T ss_dssp -------SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-------------------SCE
T ss_pred -------CEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCC-------------------CeE
Confidence 3677778888888887655 1112456777888777655332 235
Q ss_pred EEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec
Q 003878 278 YYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID 357 (789)
Q Consensus 278 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~ 357 (789)
.++++.... ........+...+..+.+++++...++.+... ...|.++|+.++. ....+..
T Consensus 153 ~~~d~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~---d~~i~i~d~~~~~-------------~~~~~~~ 213 (340)
T 4aow_A 153 KLWNTLGVC---KYTVQDESHSEWVSCVRFSPNSSNPIIVSCGW---DKLVKVWNLANCK-------------LKTNHIG 213 (340)
T ss_dssp EEECTTSCE---EEEECSSSCSSCEEEEEECSCSSSCEEEEEET---TSCEEEEETTTTE-------------EEEEECC
T ss_pred EEEEeCCCc---eEEEEeccccCcccceEEccCCCCcEEEEEcC---CCEEEEEECCCCc-------------eeeEecC
Confidence 666654321 22222222334455678888876544333222 2448888988742 1222222
Q ss_pred ccccee-EEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEE
Q 003878 358 GFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRD 436 (789)
Q Consensus 358 ~~~~~~-~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~d 436 (789)
...... ..|+|+|+.|+..+. ++.|..+|+.+......+ ... ..+..+.+++++.+++. ..++ .|++||
T Consensus 214 h~~~v~~~~~s~~~~~l~s~s~----Dg~i~iwd~~~~~~~~~~-~~~--~~v~~~~~~~~~~~~~~-~~d~--~i~iwd 283 (340)
T 4aow_A 214 HTGYLNTVTVSPDGSLCASGGK----DGQAMLWDLNEGKHLYTL-DGG--DIINALCFSPNRYWLCA-ATGP--SIKIWD 283 (340)
T ss_dssp CSSCEEEEEECTTSSEEEEEET----TCEEEEEETTTTEEEEEE-ECS--SCEEEEEECSSSSEEEE-EETT--EEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEEeC----CCeEEEEEeccCceeeee-cCC--ceEEeeecCCCCceeec-cCCC--EEEEEE
Confidence 111122 348999998775433 467999999876522222 222 45777888885555544 4455 689999
Q ss_pred CCCCceeeeccc---------CCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 437 LKNGSLLHQLPI---------EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 437 l~tG~~~~~l~~---------~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
++++.....+.. ....|..++++++++.|+-.. .-+.|+.||+++|+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs----~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 284 LEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGY----TDNLVRVWQVTIGT 339 (340)
T ss_dssp TTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEE----TTSCEEEEEEEC--
T ss_pred CCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEe----CCCEEEEEeCCCcC
Confidence 986654333321 245677889999998665332 23579999998884
No 289
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.06 E-value=4e-08 Score=107.16 Aligned_cols=284 Identities=10% Similarity=0.016 Sum_probs=165.7
Q ss_pred cEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCc------eecccccccccccccCccceeeeeeccccccc---
Q 003878 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI------VEADALSWVCFCFSHSFGYFFHLTISLLNVPT--- 201 (789)
Q Consensus 131 ~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~--- 201 (789)
...+..++++| ++|+.+. ...+|++||+.+++ .+. .+... .+.. .+..+.|+
T Consensus 16 ~~~i~~~~~~~--~~l~s~~-----~dg~i~iw~~~~~~~~~~~~~~~-~~~~h-------~~~v----~~~~~~~~~~~ 76 (397)
T 1sq9_A 16 DADIFSVSACN--SFTVSCS-----GDGYLKVWDNKLLDNENPKDKSY-SHFVH-------KSGL----HHVDVLQAIER 76 (397)
T ss_dssp SSCEEEEEECS--SEEEEEE-----TTSEEEEEESBCCTTCCGGGGEE-EEECC-------TTCE----EEEEEEEEEET
T ss_pred hcCeEEEEecC--CeEEEEc-----CCCEEEEEECCCcccccCCCcce-EEecC-------CCcE----EEEEEeccccc
Confidence 34577888999 6666432 23489999999986 111 11110 0100 11112222
Q ss_pred -cccccccccceeeEEEeeeccccceeeeeeec-c-------------------cccceEEEE----eCCcE-EEEEEcc
Q 003878 202 -YKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVS-Q-------------------FKFSSIAWT----HDSKG-FFYSRYP 255 (789)
Q Consensus 202 -~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~-~-------------------~~~~~~~ws----pDg~~-i~y~~~~ 255 (789)
+ .-..+++++..+|...+|.+.. . -....++|+ ||++. |+....+
T Consensus 77 ~g---------~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~d 147 (397)
T 1sq9_A 77 DA---------FELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVK 147 (397)
T ss_dssp TT---------EEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETT
T ss_pred CC---------ccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCC
Confidence 2 0013677778889888887654 1 224568999 99998 7665432
Q ss_pred CCCCCCCCCCCccccCCcccEEEEEECCC------CCCCc---EEEEec-----CCCCeeEEEEEEecCCcEEEEEEEcC
Q 003878 256 APKEGKDMDAGTETDSNLYHEFYYHFLGT------KQSED---ILCWKD-----PEHPKYIFSGHVTEDGQYLVMCIEEN 321 (789)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~i~~~~lg~------~~~~~---~~~~~~-----~~~~~~~~~~~~SpDG~~l~~~~~~~ 321 (789)
..|++|++.+ ..... ...+.. ..+...+..+.|+|+| .++....
T Consensus 148 -------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~-- 205 (397)
T 1sq9_A 148 -------------------GTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFN-- 205 (397)
T ss_dssp -------------------SCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECT--
T ss_pred -------------------CcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeC--
Confidence 2477777765 22211 002221 1123335578999999 6554432
Q ss_pred CCCceEEEEEECCCCCCCcccccccCCCCccEeeec-------cccceeEEEecCCCEEEEEECCCCCCceEEEEECCCC
Q 003878 322 CDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-------GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 394 (789)
Q Consensus 322 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-------~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~ 394 (789)
...|+++|+.++. +...+.. ........|+|+|+.|+..+.. ...+.|..+|+.++
T Consensus 206 ---dg~i~i~d~~~~~-------------~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d-~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 206 ---NGTVQISELSTLR-------------PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS-NSFGCITLYETEFG 268 (397)
T ss_dssp ---TSEEEEEETTTTE-------------EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEE-TTEEEEEEEETTTC
T ss_pred ---CCcEEEEECCCCc-------------eeEEEeccccccccCCccceEEECCCCCEEEEEecC-CCCceEEEEECCCC
Confidence 3569999998641 1222221 1111223489999988765432 12268999999887
Q ss_pred CCeEEeccCC-----------CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecc------cC--------
Q 003878 395 NDWFEVIPEA-----------ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP------IE-------- 449 (789)
Q Consensus 395 ~~~~~l~~~~-----------~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~------~~-------- 449 (789)
+....+.... ....+..+.+++++.++++...++ .|++||+.+++.+..+. ..
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~ 346 (397)
T 1sq9_A 269 ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDG--KLRFWDVKTKERITTLNMHCDDIEIEEDILAVD 346 (397)
T ss_dssp CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTS--EEEEEETTTTEEEEEEECCGGGCSSGGGCCCBC
T ss_pred cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCC--eEEEEEcCCCceeEEEecccCcccchhhhhccc
Confidence 6333333200 235678899998777787888777 79999999887766665 33
Q ss_pred -------CeeEEEeecccCCc---------EEEEEEcCCCCCcEEEEEECCCC
Q 003878 450 -------IGSVNAISARREDS---------VVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 450 -------~~~v~~~s~s~d~~---------~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
...+..+.++++++ .++++.+ .-+.+..|++.+|
T Consensus 347 ~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~---~dg~i~iw~~~~g 396 (397)
T 1sq9_A 347 EHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVC---LDRSIRWFREAGG 396 (397)
T ss_dssp TTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEE---TTTEEEEEEEEC-
T ss_pred cccccccCCceeEEEeccccccccccccccceEEEec---CCCcEEEEEcCCC
Confidence 56688889999873 2344332 2468888888776
No 290
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.06 E-value=2.7e-08 Score=115.14 Aligned_cols=245 Identities=8% Similarity=-0.038 Sum_probs=157.5
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCC----ceecccccccccccccCccceeeeeeccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQ----IVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLY 207 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 207 (789)
..+..+++||||++||++. +| .|++||++++ +... .+... .+
T Consensus 19 ~~v~~~~~spdg~~l~~~~--~~----~v~v~~~~~~~~~~~~~~-~~~~h-------~~-------------------- 64 (615)
T 1pgu_A 19 NFTTHLSYDPTTNAIAYPC--GK----SAFVRCLDDGDSKVPPVV-QFTGH-------GS-------------------- 64 (615)
T ss_dssp TCCCCCEEETTTTEEEEEE--TT----EEEEEECCSSCCSSCSEE-EECTT-------TT--------------------
T ss_pred CceeEEEECCCCCEEEEec--CC----eEEEEECCCCCCccccce-EEecC-------CC--------------------
Confidence 3467789999999999876 22 7999999987 4332 12211 00
Q ss_pred cccceeeEEEeeeccccceeeeeeecccc-cceEEEEe--CCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC
Q 003878 208 LRGIFFFFYLFSLVKSTIYSFWSVVSQFK-FSSIAWTH--DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT 284 (789)
Q Consensus 208 ~~~~~~~~~~~~s~~~g~~~l~~~~~~~~-~~~~~wsp--Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~ 284 (789)
. ...++|+| ||+.|+....+ ..|.+|++.+
T Consensus 65 ----------------------------~~v~~~~~sp~~~~~~l~s~~~d-------------------g~v~vw~~~~ 97 (615)
T 1pgu_A 65 ----------------------------SVVTTVKFSPIKGSQYLCSGDES-------------------GKVIVWGWTF 97 (615)
T ss_dssp ----------------------------SCEEEEEECSSTTCCEEEEEETT-------------------SEEEEEEEEE
T ss_pred ----------------------------ceEEEEEECcCCCCCEEEEecCC-------------------CEEEEEeCCC
Confidence 2 46899999 99998876432 3577887754
Q ss_pred C------CCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecc
Q 003878 285 K------QSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG 358 (789)
Q Consensus 285 ~------~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~ 358 (789)
+ ..+....+.. +...+..+.|+|||++|+....+.. ....|++++... ....+...
T Consensus 98 ~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~~~~~-~~~~v~~~d~~~---------------~~~~~~~~ 159 (615)
T 1pgu_A 98 DKESNSVEVNVKSEFQV--LAGPISDISWDFEGRRLCVVGEGRD-NFGVFISWDSGN---------------SLGEVSGH 159 (615)
T ss_dssp EGGGTEEEEEEEEEEEC--CSSCEEEEEECTTSSEEEEEECCSS-CSEEEEETTTCC---------------EEEECCSC
T ss_pred Ccccccccccccchhhc--ccccEEEEEEeCCCCEEEEeccCCC-CccEEEEEECCC---------------cceeeecC
Confidence 3 1122222332 2344678999999999988764332 235688777322 11222221
Q ss_pred ccce-eEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCc---eeeeEEEecC-CEEEEEEEeCCeEEEE
Q 003878 359 FDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERD---VLESATAVNL-NQMIVSYLSDVKYVLQ 433 (789)
Q Consensus 359 ~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~---~i~~v~~~~~-~~lv~~~~~~g~~~L~ 433 (789)
.... ...|+|+++.+++.... +..|..+|+.+++....+..+. . .+..+.++++ +.++++...++ .|+
T Consensus 160 ~~~v~~~~~~~~~~~~l~~~~~---d~~v~vwd~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~~~dg--~i~ 232 (615)
T 1pgu_A 160 SQRINACHLKQSRPMRSMTVGD---DGSVVFYQGPPFKFSASDRTHH--KQGSFVRDVEFSPDSGEFVITVGSDR--KIS 232 (615)
T ss_dssp SSCEEEEEECSSSSCEEEEEET---TTEEEEEETTTBEEEEEECSSS--CTTCCEEEEEECSTTCCEEEEEETTC--CEE
T ss_pred CccEEEEEECCCCCcEEEEEeC---CCcEEEEeCCCcceeeeecccC--CCCceEEEEEECCCCCCEEEEEeCCC--eEE
Confidence 1112 23489998844444332 4679999988765233333333 3 6888999987 67787777776 789
Q ss_pred EEECCCCceeeec-c---cCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 434 IRDLKNGSLLHQL-P---IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 434 ~~dl~tG~~~~~l-~---~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+||+.+++....+ . .....+..+.++ +++.++.... -+.+..||+.+++
T Consensus 233 vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~----d~~i~~wd~~~~~ 285 (615)
T 1pgu_A 233 CFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGA----DATIRVWDVTTSK 285 (615)
T ss_dssp EEETTTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEET----TSEEEEEETTTTE
T ss_pred EEECCCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcC----CCcEEEEECCCCc
Confidence 9999988876666 3 345667788888 7876664432 3689999998874
No 291
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.05 E-value=2.7e-09 Score=115.86 Aligned_cols=243 Identities=6% Similarity=-0.084 Sum_probs=141.9
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCc--eecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI--VEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
+..+++||||++||. |+....|++||+.++. .+. .+... .+
T Consensus 14 v~~~~~s~~g~~l~~-----~~~d~~i~iw~~~~~~~~~~~-~~~~h-------~~------------------------ 56 (377)
T 3dwl_C 14 SYEHAFNSQRTEFVT-----TTATNQVELYEQDGNGWKHAR-TFSDH-------DK------------------------ 56 (377)
T ss_dssp CSCCEECSSSSEEEC-----CCSSSCBCEEEEETTEEEECC-CBCCC-------SS------------------------
T ss_pred EEEEEECCCCCEEEE-----ecCCCEEEEEEccCCceEEEE-EEecC-------Cc------------------------
Confidence 567889999999984 4345689999999873 222 22221 00
Q ss_pred eeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCC-CCcE
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ-SEDI 290 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~-~~~~ 290 (789)
....++|+|||+.|+....+ ..|++|++.+.. ....
T Consensus 57 ------------------------~v~~~~~s~~~~~l~s~s~d-------------------~~v~vwd~~~~~~~~~~ 93 (377)
T 3dwl_C 57 ------------------------IVTCVDWAPKSNRIVTCSQD-------------------RNAYVYEKRPDGTWKQT 93 (377)
T ss_dssp ------------------------CEEEEEECTTTCCEEEEETT-------------------SSEEEC------CCCCE
T ss_pred ------------------------eEEEEEEeCCCCEEEEEeCC-------------------CeEEEEEcCCCCceeee
Confidence 25789999999988876433 247788877654 1222
Q ss_pred EEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-ccccee-EEEec
Q 003878 291 LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQY-EVIAN 368 (789)
Q Consensus 291 ~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~~~~-~~~s~ 368 (789)
..+. .+...+..+.|+|||++|+....+ ..|.++|+.++.. ......+.. ...... ..|+|
T Consensus 94 ~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~----------~~~~~~~~~~h~~~v~~~~~~~ 156 (377)
T 3dwl_C 94 LVLL--RLNRAATFVRWSPNEDKFAVGSGA-----RVISVCYFEQEND----------WWVSKHLKRPLRSTILSLDWHP 156 (377)
T ss_dssp EECC--CCSSCEEEEECCTTSSCCEEEESS-----SCEEECCC---------------CCCCEEECSSCCSCEEEEEECT
T ss_pred eEec--ccCCceEEEEECCCCCEEEEEecC-----CeEEEEEECCccc----------ceeeeEeecccCCCeEEEEEcC
Confidence 2222 233446789999999999876643 3478888876420 001222222 111122 34899
Q ss_pred CCCEEEEEECCCCCCceEEEEECCCCC--------------C-eEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEE
Q 003878 369 DDTVFTFLTNKDAPKYKIIRVDLKEPN--------------D-WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQ 433 (789)
Q Consensus 369 dG~~l~~~tn~~~~~~~L~~~dl~~~~--------------~-~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~ 433 (789)
+|+.|+..+.. ..|..+|+...+ . -+.+..-.....+..+.+++++.++++...++ .|+
T Consensus 157 ~~~~l~~~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--~i~ 230 (377)
T 3dwl_C 157 NNVLLAAGCAD----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDS--SVT 230 (377)
T ss_dssp TSSEEEEEESS----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTT--EEC
T ss_pred CCCEEEEEeCC----CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCC--cEE
Confidence 99887765543 457777764211 0 01111112234578899998777788888887 788
Q ss_pred EEECCCCce----eeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 434 IRDLKNGSL----LHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 434 ~~dl~tG~~----~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
+||+.+++. ...+..+...+..+.++++++.++.. + -..+.+|+..
T Consensus 231 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~-~----~~~~~~~~~~ 280 (377)
T 3dwl_C 231 IAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAG-Y----NYSPILLQGN 280 (377)
T ss_dssp -CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEE-S----SSSEEEECCC
T ss_pred EEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEE-c----CCcEEEEEeC
Confidence 999987765 44555556667788999998755432 2 2334466654
No 292
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=99.04 E-value=2.2e-09 Score=110.00 Aligned_cols=212 Identities=14% Similarity=0.035 Sum_probs=125.2
Q ss_pred ccEEEEEcCCCCccCCCCCCHHHHHHHHcCCe--EEEEEeecCCCC--C-ChhHHhc-------ccccCCcc----hHHH
Q 003878 538 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGA--VFCIANIRGGGE--Y-GEEWHKG-------GALAKKQN----CFDD 601 (789)
Q Consensus 538 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~--~v~~~~~RG~g~--~-g~~~~~~-------~~~~~~~~----~~~D 601 (789)
.+.||++||..+... .|.. ....|.+.|+ .|+.+|+++.|. + |.--... +...+... ..++
T Consensus 6 ~~pvvliHG~~~~~~--~~~~-l~~~L~~~g~~~~vi~~dv~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~~ 82 (249)
T 3fle_A 6 TTATLFLHGYGGSER--SETF-MVKQALNKNVTNEVITARVSSEGKVYFDKKLSEDAANPIVKVEFKDNKNGNFKENAYW 82 (249)
T ss_dssp CEEEEEECCTTCCGG--GTHH-HHHHHHTTTSCSCEEEEEECSSCCEEESSCCC--CCSCEEEEEESSTTCCCHHHHHHH
T ss_pred CCcEEEECCCCCChh--HHHH-HHHHHHHcCCCceEEEEEECCCCCEEEccccccccCCCeEEEEcCCCCCccHHHHHHH
Confidence 456778999765433 3443 4456666886 588888886553 1 2100000 00111111 2456
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC-----ceeEEEecCCcccccccccccCCccchhhcCCCCc
Q 003878 602 FISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD-----LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCSEE 676 (789)
Q Consensus 602 ~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd-----~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p~~ 676 (789)
+.+++++|.++- ..+++.++||||||.+++.++.++|+ +++.+|+..+..+.................|.|..
T Consensus 83 l~~~i~~l~~~~--~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~~~~~~~~~~g~p~~ 160 (249)
T 3fle_A 83 IKEVLSQLKSQF--GIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAGVYNGILNMNENVNEIIVDKQGKPSR 160 (249)
T ss_dssp HHHHHHHHHHTT--CCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESCCTTCCTTTSSCTTTSCBCTTCCBSS
T ss_pred HHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCCccCCcccccCCcchhhhcccCCCcc
Confidence 777888887762 34589999999999999999998874 67888877655544322211111111123355522
Q ss_pred -HHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecC------CCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcE
Q 003878 677 -EEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD------HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPI 749 (789)
Q Consensus 677 -~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~------~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 749 (789)
...++.|.+..+ .... ...|+|.++|+ .|..||...++.+...++.. ....
T Consensus 161 ~~~~~~~l~~~~~--~~p~----------~~~~vl~I~G~~~~~~~sDG~V~~~Sa~~~~~l~~~~----------~~~y 218 (249)
T 3fle_A 161 MNAAYRQLLSLYK--IYCG----------KEIEVLNIYGDLEDGSHSDGRVSNSSSQSLQYLLRGS----------TKSY 218 (249)
T ss_dssp CCHHHHHTGGGHH--HHTT----------TTCEEEEEEEECCSSSCBSSSSBHHHHHTHHHHSTTC----------SSEE
T ss_pred cCHHHHHHHHHHh--hCCc----------cCCeEEEEeccCCCCCCCCCcccHHHHHHHHHHHhhC----------CCce
Confidence 234444433311 1221 14699999998 79999998887776666654 4555
Q ss_pred EEEEeCC--CCcCCCCchhhHHHHHHHHHHHH
Q 003878 750 IGRIERK--AGHGVGLPTQKMIDEAADRYGFM 779 (789)
Q Consensus 750 ~l~~~~~--~gH~~~~~~~~~~~~~~~~~~fl 779 (789)
...++.+ +.|...-... +....+..||
T Consensus 219 ~e~~v~g~~a~Hs~l~~n~---~V~~~I~~FL 247 (249)
T 3fle_A 219 QEMKFKGAKAQHSQLHENK---DVANEIIQFL 247 (249)
T ss_dssp EEEEEESGGGSTGGGGGCH---HHHHHHHHHH
T ss_pred EEEEEeCCCCchhccccCH---HHHHHHHHHh
Confidence 5566655 8898754433 4455666776
No 293
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.04 E-value=3.3e-07 Score=97.41 Aligned_cols=194 Identities=9% Similarity=0.044 Sum_probs=124.0
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|+|||+.|+-...+ ..|++|++.++.. ...+.. +...+..+.++|++++|+.
T Consensus 68 v~~~~~s~dg~~l~s~s~D-------------------~~v~~wd~~~~~~--~~~~~~--h~~~v~~~~~~~~~~~l~s 124 (319)
T 3frx_A 68 VQDCTLTADGAYALSASWD-------------------KTLRLWDVATGET--YQRFVG--HKSDVMSVDIDKKASMIIS 124 (319)
T ss_dssp EEEEEECTTSSEEEEEETT-------------------SEEEEEETTTTEE--EEEEEC--CSSCEEEEEECTTSCEEEE
T ss_pred EEEEEECCCCCEEEEEeCC-------------------CEEEEEECCCCCe--eEEEcc--CCCcEEEEEEcCCCCEEEE
Confidence 4678999999998865433 4689999876532 223333 2344678999999999876
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEecC------CCEEEEEECCCCCCceEEEE
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIAND------DTVFTFLTNKDAPKYKIIRV 389 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~d------G~~l~~~tn~~~~~~~L~~~ 389 (789)
.+.+ ..|.++|+.+.. ...+........ ..+.|+ +..++..+ .+..|..+
T Consensus 125 ~s~D-----~~i~vwd~~~~~--------------~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~----~d~~i~~w 181 (319)
T 3frx_A 125 GSRD-----KTIKVWTIKGQC--------------LATLLGHNDWVSQVRVVPNEKADDDSVTIISAG----NDKMVKAW 181 (319)
T ss_dssp EETT-----SCEEEEETTSCE--------------EEEECCCSSCEEEEEECCC------CCEEEEEE----TTSCEEEE
T ss_pred EeCC-----CeEEEEECCCCe--------------EEEEeccCCcEEEEEEccCCCCCCCccEEEEEe----CCCEEEEE
Confidence 6543 347788886421 122221111111 224443 33444322 24578889
Q ss_pred ECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEE
Q 003878 390 DLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISF 469 (789)
Q Consensus 390 dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ 469 (789)
|+.+.+....+..+. ..+..+.+++++.++++...++ .|++||+.+++....+..+ ..+..++++|++..++...
T Consensus 182 d~~~~~~~~~~~~h~--~~v~~~~~sp~g~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~~~ 256 (319)
T 3frx_A 182 NLNQFQIEADFIGHN--SNINTLTASPDGTLIASAGKDG--EIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAAAT 256 (319)
T ss_dssp ETTTTEEEEEECCCC--SCEEEEEECTTSSEEEEEETTC--EEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEEEE
T ss_pred ECCcchhheeecCCC--CcEEEEEEcCCCCEEEEEeCCC--eEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEEEc
Confidence 998765223344443 5678899998778888888887 7999999887765555533 4577889999998776543
Q ss_pred cCCCCCcEEEEEECCCC
Q 003878 470 TSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 470 ss~~~P~~ly~~dl~tg 486 (789)
. ..+..+++.++
T Consensus 257 ~-----~~i~v~~~~~~ 268 (319)
T 3frx_A 257 A-----TGIKVFSLDPQ 268 (319)
T ss_dssp T-----TEEEEEEETTE
T ss_pred C-----CCcEEEEeCcC
Confidence 2 35777777665
No 294
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase, alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Probab=99.02 E-value=4.2e-10 Score=117.52 Aligned_cols=116 Identities=12% Similarity=0.084 Sum_probs=80.1
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.+| .+|.+... +.+ ...|.||++||..+... .|.. ....|+ .+|.|+++|.||.|..... ..
T Consensus 11 ~~g-~~l~y~~~-~~G----~~~p~vvllHG~~~~~~--~w~~-~~~~L~-~~~rvia~DlrGhG~S~~~--------~~ 72 (276)
T 2wj6_A 11 VFD-NKLSYIDN-QRD----TDGPAILLLPGWCHDHR--VYKY-LIQELD-ADFRVIVPNWRGHGLSPSE--------VP 72 (276)
T ss_dssp ETT-EEEEEEEC-CCC----CSSCEEEEECCTTCCGG--GGHH-HHHHHT-TTSCEEEECCTTCSSSCCC--------CC
T ss_pred eCC-eEEEEEEe-cCC----CCCCeEEEECCCCCcHH--HHHH-HHHHHh-cCCEEEEeCCCCCCCCCCC--------CC
Confidence 478 77765432 112 23478999999765543 3444 345666 7899999999998864321 12
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-CCceeEEEecCC
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-PDLFGCALAHVG 651 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-pd~f~a~v~~~p 651 (789)
..+++++.+-+..|++. ..-+++.++|||+||.+++.++.++ |++++++|+..+
T Consensus 73 ~~~~~~~a~dl~~ll~~--l~~~~~~lvGhSmGG~va~~~A~~~~P~rv~~lvl~~~ 127 (276)
T 2wj6_A 73 DFGYQEQVKDALEILDQ--LGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDW 127 (276)
T ss_dssp CCCHHHHHHHHHHHHHH--HTCCSEEEEEEGGGHHHHHHHHHHHHHHHSCCEEEESC
T ss_pred CCCHHHHHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHHhCHHhhceEEEecc
Confidence 23566665555555544 2235899999999999999999999 999999988754
No 295
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.02 E-value=1.4e-07 Score=104.41 Aligned_cols=293 Identities=13% Similarity=-0.008 Sum_probs=174.3
Q ss_pred EEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccc
Q 003878 119 VLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLN 198 (789)
Q Consensus 119 ~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (789)
-+||...+..|- .+.-+.||++ +.||.+.+ .+|+|||+.||+.+.. +... .+.+ -..+..+
T Consensus 95 ~~l~ap~~~~d~--y~~~l~wS~~-n~lAvgld------~tV~lWd~~tg~~~~~-~~~~-----~~~~----~V~sv~f 155 (420)
T 4gga_A 95 RILDAPEIRNDY--YLNLVDWSSG-NVLAVALD------NSVYLWSASSGDILQL-LQME-----QPGE----YISSVAW 155 (420)
T ss_dssp EEEECTTCCCCT--TCBCEEECTT-SEEEEEET------TEEEEEETTTCCEEEE-EECC-----STTC----CEEEEEE
T ss_pred eEEECCCCcccc--cceeEEECCC-CEEEEEeC------CEEEEEECCCCCEEEE-EEec-----CCCC----cEEEEEE
Confidence 456766665552 2455789986 48887653 2799999999976531 1110 0111 1223344
Q ss_pred ccccccccccccceeeEEEeeeccccceeeeeeec--------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCcccc
Q 003878 199 VPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVS--------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETD 270 (789)
Q Consensus 199 ~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~--------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~ 270 (789)
.|++ .+++++..+|+..||.+.. .....-.++++|++.|+....
T Consensus 156 spdg------------~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~---------------- 207 (420)
T 4gga_A 156 IKEG------------NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSR---------------- 207 (420)
T ss_dssp CTTS------------SEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEET----------------
T ss_pred CCCC------------CEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeC----------------
Confidence 5676 4677888999999998754 111123345556766654432
Q ss_pred CCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCC
Q 003878 271 SNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 350 (789)
Q Consensus 271 ~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 350 (789)
...++.++..+... .+..+... ...+..+.++|+|++++....+ ..+.+++..++... ..
T Consensus 208 ---d~~i~~~d~~~~~~-~~~~~~~h--~~~~~~~~~~~~g~~l~s~~~D-----~~v~i~~~~~~~~~---------~~ 267 (420)
T 4gga_A 208 ---SGHIHHHDVRVAEH-HVATLSGH--SQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGG---------WV 267 (420)
T ss_dssp ---TSEEEEEETTSSSC-EEEEEECC--SSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCCSSC---------SC
T ss_pred ---CCceeEeeecccce-eeEEeccc--ccceeeeeecCCCCeeeeeecc-----ccceEEeecccccc---------ce
Confidence 33577777765432 22333332 3345678999999999876543 34788888764311 11
Q ss_pred ccEeeeccccce-eEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCe
Q 003878 351 PFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVK 429 (789)
Q Consensus 351 ~~~~l~~~~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~ 429 (789)
............ ...|+|++..++.+... ..+..|..+|+.++.....+..+ ..+..+.+.+++..+++......
T Consensus 268 ~~~~~~~~~~~V~~~~~~p~~~~~la~~~g-s~D~~I~iwd~~t~~~~~~~~~~---~~v~~~~~~~~~~~lv~~sg~~d 343 (420)
T 4gga_A 268 PLQTFTQHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGACLSAVDAH---SQVCSILWSPHYKELISGHGFAQ 343 (420)
T ss_dssp CSEEECCCSSCEEEEEECTTCTTEEEEEEC-TTTCEEEEEETTTTEEEEEEECS---SCEEEEEEETTTTEEEEEECTTT
T ss_pred eeeeecccCCceeeeeeCCCcccEEEEEee-cCCCEEEEEeCCccccceeeccc---cceeeeeecCCCCeEEEEEecCC
Confidence 111221111111 23478877665544322 23578999999887623333222 34566777765444444442222
Q ss_pred EEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 430 YVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 430 ~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
..|++||+.+++.+..+..+.+.|..++++||+..|+ +.+ .-.+|..||+.+.
T Consensus 344 ~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~-S~s---~D~tvriWdv~~~ 396 (420)
T 4gga_A 344 NQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAA---ADETLRLWRCFEL 396 (420)
T ss_dssp CCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEE---TTTEEEEECCSCS
T ss_pred CEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEe---cCCeEEEEECCCC
Confidence 3799999998988778877777888999999998655 332 2367888887654
No 296
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.01 E-value=8.1e-08 Score=106.52 Aligned_cols=249 Identities=9% Similarity=0.031 Sum_probs=139.4
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCcee----------cccccccccccccCccceeee-----eeccc
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE----------ADALSWVCFCFSHSFGYFFHL-----TISLL 197 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~----------~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 197 (789)
.|..++|||||++||.+.. ...|+|||+.++... ...+... +..++|+..+ ..+..
T Consensus 30 ~V~~v~~s~~g~~la~g~~-----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h----~~~~~~~~~~~~~~~V~~l~ 100 (447)
T 3dw8_B 30 IISTVEFNHSGELLATGDK-----GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSH----EPEFDYLKSLEIEEKINKIR 100 (447)
T ss_dssp SEEEEEECSSSSEEEEEET-----TSEEEEEEECC-----CCCCCCEEEEEEEECC----CCEEEGGGTEEECCCCCEEE
T ss_pred cEEEEEECCCCCEEEEEcC-----CCeEEEEEecCCCCCCcccccceeEecccccc----cccccccccccccCceEEEE
Confidence 4788999999999986432 347999999987521 0011110 0000111100 11122
Q ss_pred cccccccccccccceeeEEEeeeccccceeeeeeec--------------------------------------------
Q 003878 198 NVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVS-------------------------------------------- 233 (789)
Q Consensus 198 ~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~-------------------------------------------- 233 (789)
+.|++. ...++++..+|+..||.+..
T Consensus 101 ~~~~~~----------~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
T 3dw8_B 101 WLPQKN----------AAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR 170 (447)
T ss_dssp ECCCCS----------SSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred EcCCCC----------cceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceE
Confidence 233320 03567778899999998753
Q ss_pred ------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEE-----ecCCCCeeE
Q 003878 234 ------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCW-----KDPEHPKYI 302 (789)
Q Consensus 234 ------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~-----~~~~~~~~~ 302 (789)
......++|+|||+.|+.. . ...|.+|++.+... ...++ ....+...+
T Consensus 171 ~~~~~h~~~v~~~~~~~~~~~l~s~-~-------------------d~~i~iwd~~~~~~-~~~~~~~~~~~~~~~~~~v 229 (447)
T 3dw8_B 171 IFANAHTYHINSISINSDYETYLSA-D-------------------DLRINLWHLEITDR-SFNIVDIKPANMEELTEVI 229 (447)
T ss_dssp EECSCCSSCCCEEEECTTSSEEEEE-C-------------------SSEEEEEETTEEEE-EEEEEECCCSSGGGCCCCE
T ss_pred EeccCCCcceEEEEEcCCCCEEEEe-C-------------------CCeEEEEECCCCCc-eeeeeecccccccccCcce
Confidence 1113578999999988754 2 23588888864221 11111 111233446
Q ss_pred EEEEEecCC-cEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc-------------cceeEEEec
Q 003878 303 FSGHVTEDG-QYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF-------------DAQYEVIAN 368 (789)
Q Consensus 303 ~~~~~SpDG-~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~-------------~~~~~~~s~ 368 (789)
..+.|+|+| +.|+....+ ..|.++|+.++... ......+.... ......|+|
T Consensus 230 ~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 295 (447)
T 3dw8_B 230 TAAEFHPNSCNTFVYSSSK-----GTIRLCDMRASALC---------DRHSKLFEEPEDPSNRSFFSEIISSISDVKFSH 295 (447)
T ss_dssp EEEEECSSCTTEEEEEETT-----SCEEEEETTTCSSS---------CTTCEEECCC-----CCHHHHHTTCEEEEEECT
T ss_pred EEEEECCCCCcEEEEEeCC-----CeEEEEECcCCccc---------cceeeEeccCCCccccccccccCceEEEEEECC
Confidence 789999999 777765533 34889998875310 00011111111 112234899
Q ss_pred CCCEEEEEECCCCCCceEEEEECCC-CCCeEEeccCCCCc-------------eeeeEEEecCCEEEEEEEeCCeEEEEE
Q 003878 369 DDTVFTFLTNKDAPKYKIIRVDLKE-PNDWFEVIPEAERD-------------VLESATAVNLNQMIVSYLSDVKYVLQI 434 (789)
Q Consensus 369 dG~~l~~~tn~~~~~~~L~~~dl~~-~~~~~~l~~~~~~~-------------~i~~v~~~~~~~lv~~~~~~g~~~L~~ 434 (789)
+|+.|+..+. ..|..+|+.. +.....+..+.... .+..+.+++++..+++...++ .|++
T Consensus 296 ~g~~l~~~~~-----~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg--~v~i 368 (447)
T 3dw8_B 296 SGRYMMTRDY-----LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNN--FFRM 368 (447)
T ss_dssp TSSEEEEEES-----SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTT--EEEE
T ss_pred CCCEEEEeeC-----CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCC--EEEE
Confidence 9998775432 5788999876 43222222221100 012378888767778888887 7999
Q ss_pred EECCCCce
Q 003878 435 RDLKNGSL 442 (789)
Q Consensus 435 ~dl~tG~~ 442 (789)
||+.+++.
T Consensus 369 wd~~~~~~ 376 (447)
T 3dw8_B 369 FDRNTKRD 376 (447)
T ss_dssp EETTTCCE
T ss_pred EEcCCCcc
Confidence 99987764
No 297
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.01 E-value=2e-08 Score=127.06 Aligned_cols=287 Identities=11% Similarity=0.078 Sum_probs=174.8
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
+...+..+++||||++||.+. ...+|++||+.+++.+. .+... .+. ..+..+.|++
T Consensus 614 h~~~v~~~~~s~~~~~l~s~~-----~d~~i~vw~~~~~~~~~-~~~~h-------~~~----v~~~~~s~~~------- 669 (1249)
T 3sfz_A 614 HTDAVYHACFSQDGQRIASCG-----ADKTLQVFKAETGEKLL-DIKAH-------EDE----VLCCAFSSDD------- 669 (1249)
T ss_dssp CSSCEEEEEECTTSSEEEEEE-----TTSCEEEEETTTCCEEE-EECCC-------SSC----EEEEEECTTS-------
T ss_pred ccccEEEEEECCCCCEEEEEe-----CCCeEEEEECCCCCEEE-EeccC-------CCC----EEEEEEecCC-------
Confidence 334578899999999998543 23479999999997543 12211 110 1222334666
Q ss_pred cceeeEEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEE
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 279 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 279 (789)
++++++..+|...+|.+.. ......++|+|+++..++... .....|.+
T Consensus 670 -----~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg-----------------~~d~~v~v 727 (1249)
T 3sfz_A 670 -----SYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATG-----------------SNDFFLKL 727 (1249)
T ss_dssp -----SEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEE-----------------ETTSCEEE
T ss_pred -----CEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEE-----------------eCCCeEEE
Confidence 3677788899999998754 122357889997654333321 12235888
Q ss_pred EECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec--
Q 003878 280 HFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-- 357 (789)
Q Consensus 280 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-- 357 (789)
|++.++.. ...+. .+...+..+.|+|||++|+..+.+ ..|.++|+.++... ..+..............
T Consensus 728 wd~~~~~~--~~~~~--~h~~~v~~~~~sp~~~~l~s~s~d-----g~v~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~ 797 (1249)
T 3sfz_A 728 WDLNQKEC--RNTMF--GHTNSVNHCRFSPDDELLASCSAD-----GTLRLWDVRSANER-KSINVKRFFLSSEDPPEDV 797 (1249)
T ss_dssp EETTSSSE--EEEEC--CCSSCEEEEEECSSTTEEEEEESS-----SEEEEEEGGGTEEE-EEEECCCCC--------CC
T ss_pred EECCCcch--hheec--CCCCCEEEEEEecCCCEEEEEECC-----CeEEEEeCCCCccc-ceecccccccccCCccccc
Confidence 99876532 22222 233456789999999998876542 45888888764210 00000000000000000
Q ss_pred cccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEEC
Q 003878 358 GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDL 437 (789)
Q Consensus 358 ~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl 437 (789)
........|+|+|+.+++.+ ...+..+++.++.....+. ......+..+.+++++.++++...++ .|.+|++
T Consensus 798 ~~~v~~~~~s~dg~~l~~~~-----~~~v~~~d~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~dg--~v~vwd~ 869 (1249)
T 3sfz_A 798 EVIVKCCSWSADGDKIIVAA-----KNKVLLFDIHTSGLLAEIH-TGHHSTIQYCDFSPYDHLAVIALSQY--CVELWNI 869 (1249)
T ss_dssp CCCBCCCCBCTTSSEEEEEE-----TTEEEEEETTTCCEEEEEE-CSSSSCCCEEEECSSTTEEEEECSSS--CEEEEET
T ss_pred cceEEEEEECCCCCEEEEEc-----CCcEEEEEecCCCceeEEc-CCCCCceEEEEEcCCCCEEEEEeCCC--eEEEEEc
Confidence 00011124899999888755 3579999998876333332 22235677888988777777777776 6889999
Q ss_pred CCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 438 KNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 438 ~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
.++.....+..+.+.+..+.++++++.++... .-+.+..|++.
T Consensus 870 ~~~~~~~~~~~h~~~v~~v~~spdg~~l~s~s----~dg~v~vw~~~ 912 (1249)
T 3sfz_A 870 DSRLKVADCRGHLSWVHGVMFSPDGSSFLTAS----DDQTIRVWETK 912 (1249)
T ss_dssp TTTEEEEEECCCSSCEEEEEECTTSSEEEEEE----TTSCEEEEEHH
T ss_pred CCCceeeecCCCccceEEEEECCCCCEEEEEe----CCCeEEEEEcc
Confidence 98877666666667788899999998766432 23577777754
No 298
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.01 E-value=9.9e-08 Score=100.29 Aligned_cols=237 Identities=8% Similarity=-0.052 Sum_probs=147.5
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
..+..+.+||||++||-+ +...+|++||+++++.+.. +... .+... ...+.
T Consensus 68 ~~V~~v~~~~~~~~l~sg-----s~Dg~v~iw~~~~~~~~~~-~~~h-------~~~~~------~~~~~---------- 118 (318)
T 4ggc_A 68 EYISSVAWIKEGNYLAVG-----TSSAEVQLWDVQQQKRLRN-MTSH-------SARVG------SLSWN---------- 118 (318)
T ss_dssp CCEEEEEECTTSSEEEEE-----ETTSEEEEEETTTTEEEEE-EECC-------SSCEE------EEEEE----------
T ss_pred CeEEEEEECCCCCEEEEE-----ECCCcEEEeecCCceeEEE-ecCc-------cceEE------EeecC----------
Confidence 457889999999999843 3345899999999976532 1111 00000 00011
Q ss_pred eeeEEEeeeccccceeeeeeec-----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEE
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVS-----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYH 280 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~-----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 280 (789)
..+++++..++...+|.... .-......|+++|+.|+....+ ..|.+|
T Consensus 119 --~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d-------------------~~i~iw 177 (318)
T 4ggc_A 119 --SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGND-------------------NLVNVW 177 (318)
T ss_dssp --TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETT-------------------SCEEEE
T ss_pred --CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecC-------------------cceeEE
Confidence 13466666777776665443 1123567889999888765432 247888
Q ss_pred ECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc
Q 003878 281 FLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD 360 (789)
Q Consensus 281 ~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 360 (789)
++.++......+.........+....++|++..++....... ...|.+++..... ..........
T Consensus 178 d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~--~~~i~lwd~~~~~-------------~~~~~~~~~~ 242 (318)
T 4ggc_A 178 PSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTS--DRHIRIWNVCSGA-------------CLSAVDAHSQ 242 (318)
T ss_dssp ESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTT--TCEEEEEETTTCC-------------EEEEEECSSC
T ss_pred ECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCC--CCEEEEEeccccc-------------ccccccceee
Confidence 887654332222222222334567889999888876654333 4568888887632 1111112222
Q ss_pred ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCC
Q 003878 361 AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKN 439 (789)
Q Consensus 361 ~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~t 439 (789)
.....++++++.++..+.. .+..|..+|+.+++....+..|. ..+..+++++++.++++...|+ .|++||+.+
T Consensus 243 v~~~~~~~~~~~~~~~sg~--~d~~i~iwd~~~~~~~~~l~gH~--~~V~~l~~spdg~~l~S~s~D~--~v~iWd~~~ 315 (318)
T 4ggc_A 243 VCSILWSPHYKELISGHGF--AQNQLVIWKYPTMAKVAELKGHT--SRVLSLTMSPDGATVASAAADE--TLRLWRCFE 315 (318)
T ss_dssp EEEEEEETTTTEEEEEECT--TTCCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSCEEEEETTT--EEEEECCSC
T ss_pred eeeeeecccccceEEEEEc--CCCEEEEEECCCCcEEEEEcCCC--CCEEEEEEcCCCCEEEEEecCC--eEEEEECCC
Confidence 2334588999988876643 34679999998887455555454 5688999998778888899888 688898853
No 299
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.01 E-value=9.1e-08 Score=101.77 Aligned_cols=240 Identities=10% Similarity=0.047 Sum_probs=145.3
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
+...+..+.+||||++|+-+ +...+|++||+.+++.+. .+... .+
T Consensus 64 h~~~v~~~~~s~dg~~l~s~-----s~D~~v~~wd~~~~~~~~-~~~~h-------~~---------------------- 108 (319)
T 3frx_A 64 HSHIVQDCTLTADGAYALSA-----SWDKTLRLWDVATGETYQ-RFVGH-------KS---------------------- 108 (319)
T ss_dssp CSSCEEEEEECTTSSEEEEE-----ETTSEEEEEETTTTEEEE-EEECC-------SS----------------------
T ss_pred CcccEEEEEECCCCCEEEEE-----eCCCEEEEEECCCCCeeE-EEccC-------CC----------------------
Confidence 33457788999999998843 334589999999997553 12211 00
Q ss_pred cceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCc
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED 289 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~ 289 (789)
....++|+||++.|+-...+ ..|.+|++... .
T Consensus 109 --------------------------~v~~~~~~~~~~~l~s~s~D-------------------~~i~vwd~~~~---~ 140 (319)
T 3frx_A 109 --------------------------DVMSVDIDKKASMIISGSRD-------------------KTIKVWTIKGQ---C 140 (319)
T ss_dssp --------------------------CEEEEEECTTSCEEEEEETT-------------------SCEEEEETTSC---E
T ss_pred --------------------------cEEEEEEcCCCCEEEEEeCC-------------------CeEEEEECCCC---e
Confidence 25788999999988765433 24788887532 1
Q ss_pred EEEEecCCCCeeEEEEEEecCC------cEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce-
Q 003878 290 ILCWKDPEHPKYIFSGHVTEDG------QYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ- 362 (789)
Q Consensus 290 ~~~~~~~~~~~~~~~~~~SpDG------~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~- 362 (789)
...+. .+...+..+.++|++ ..++.... ...|.++|+.++. ....+.......
T Consensus 141 ~~~~~--~h~~~v~~~~~~~~~~~~~~~~~l~s~~~-----d~~i~~wd~~~~~-------------~~~~~~~h~~~v~ 200 (319)
T 3frx_A 141 LATLL--GHNDWVSQVRVVPNEKADDDSVTIISAGN-----DKMVKAWNLNQFQ-------------IEADFIGHNSNIN 200 (319)
T ss_dssp EEEEC--CCSSCEEEEEECCC------CCEEEEEET-----TSCEEEEETTTTE-------------EEEEECCCCSCEE
T ss_pred EEEEe--ccCCcEEEEEEccCCCCCCCccEEEEEeC-----CCEEEEEECCcch-------------hheeecCCCCcEE
Confidence 22222 233445678888854 35554332 2448888987631 111222211112
Q ss_pred eEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCce
Q 003878 363 YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 363 ~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~ 442 (789)
...|+|+|+.|+..+ .++.|..+|+.+++....+ ... ..+..+++++++.+++....+ .+.+|+++++..
T Consensus 201 ~~~~sp~g~~l~s~~----~dg~i~iwd~~~~~~~~~~-~~~--~~v~~~~~sp~~~~la~~~~~---~i~v~~~~~~~~ 270 (319)
T 3frx_A 201 TLTASPDGTLIASAG----KDGEIMLWNLAAKKAMYTL-SAQ--DEVFSLAFSPNRYWLAAATAT---GIKVFSLDPQYL 270 (319)
T ss_dssp EEEECTTSSEEEEEE----TTCEEEEEETTTTEEEEEE-ECC--SCEEEEEECSSSSEEEEEETT---EEEEEEETTEEE
T ss_pred EEEEcCCCCEEEEEe----CCCeEEEEECCCCcEEEEe-cCC--CcEEEEEEcCCCCEEEEEcCC---CcEEEEeCcCee
Confidence 234899999877543 3468999999887533333 222 357789999876676666655 377788775443
Q ss_pred eeeccc--------CCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 443 LHQLPI--------EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 443 ~~~l~~--------~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
...+.. ....+..++++||++.++... .-+.++.||+.++
T Consensus 271 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~sg~----~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 271 VDDLRPEFAGYSKAAEPHAVSLAWSADGQTLFAGY----TDNVIRVWQVMTA 318 (319)
T ss_dssp EEEECCCCTTCCGGGCCCEEEEEECTTSSEEEEEE----TTSCEEEEEEEEC
T ss_pred eeccCccccccccCcCcceeEEEECCCCCEEEEee----cCceEEEEEEeec
Confidence 333321 123466788999999776432 2356788877553
No 300
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=99.01 E-value=1e-08 Score=107.84 Aligned_cols=117 Identities=12% Similarity=0.059 Sum_probs=76.5
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.+| .+|.+... +..|.||++||.++.... |.. ....|. .||.|+++|.||.|..... .......
T Consensus 12 ~~~-~~~~~~~~--------g~g~~~vllHG~~~~~~~--w~~-~~~~l~-~~~~vi~~Dl~G~G~s~~~---~~~~~~~ 75 (291)
T 3qyj_A 12 TTE-ARINLVKA--------GHGAPLLLLHGYPQTHVM--WHK-IAPLLA-NNFTVVATDLRGYGDSSRP---ASVPHHI 75 (291)
T ss_dssp CSS-CEEEEEEE--------CCSSEEEEECCTTCCGGG--GTT-THHHHT-TTSEEEEECCTTSTTSCCC---CCCGGGG
T ss_pred cCC-eEEEEEEc--------CCCCeEEEECCCCCCHHH--HHH-HHHHHh-CCCEEEEEcCCCCCCCCCC---CCCcccc
Confidence 467 77776432 344679999998765443 332 245666 7999999999997754321 0000001
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecC
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHV 650 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~ 650 (789)
..+.+++.+.+..+++.- ..+++.++|||+||.++..++.++|++++++|+..
T Consensus 76 ~~~~~~~~~~~~~~~~~l--~~~~~~l~GhS~Gg~ia~~~a~~~p~~v~~lvl~~ 128 (291)
T 3qyj_A 76 NYSKRVMAQDQVEVMSKL--GYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLD 128 (291)
T ss_dssp GGSHHHHHHHHHHHHHHT--TCSSEEEEEETHHHHHHHHHHHHCTTTEEEEEEES
T ss_pred ccCHHHHHHHHHHHHHHc--CCCCEEEEEEChHHHHHHHHHHhCchhccEEEEEC
Confidence 123444444333334331 23579999999999999999999999999998764
No 301
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.01 E-value=3.4e-07 Score=96.17 Aligned_cols=295 Identities=13% Similarity=0.019 Sum_probs=167.2
Q ss_pred CCceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeee
Q 003878 115 AKAKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTI 194 (789)
Q Consensus 115 ~~~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (789)
.+.+ +||...+..+-+ +.-++|||++ .||.+.+ .+|+|||++||+.+.. +... .+.+ ...
T Consensus 12 ~p~r-vldap~~~~d~y--~~~l~WS~~~-~lAvg~D------~tV~iWd~~tg~~~~~-~~~~-----~~~~----~V~ 71 (318)
T 4ggc_A 12 LPDR-ILDAPEIRNDYY--LNLVDWSSGN-VLAVALD------NSVYLWSASSGDILQL-LQME-----QPGE----YIS 71 (318)
T ss_dssp SCSE-EEECTTCCCCTT--CBCEEECTTS-EEEEEET------TEEEEEETTTCCEEEE-EECC-----STTC----CEE
T ss_pred CCCE-EeeCCCCccccc--ceEEEECCCC-EEEEEeC------CEEEEEECCCCCEEEE-EEec-----CCCC----eEE
Confidence 3344 457655544322 3457899997 7876542 2799999999976541 1110 0111 112
Q ss_pred ccccccccccccccccceeeEEEeeeccccceeeeeeec--------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCC
Q 003878 195 SLLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVS--------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAG 266 (789)
Q Consensus 195 ~~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~--------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~ 266 (789)
+..+.|++ ++++++..+|+..||.+.. ........++++++.++....
T Consensus 72 ~v~~~~~~------------~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~------------ 127 (318)
T 4ggc_A 72 SVAWIKEG------------NYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSR------------ 127 (318)
T ss_dssp EEEECTTS------------SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEET------------
T ss_pred EEEECCCC------------CEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEec------------
Confidence 23344665 4677888999999998754 111234566777776654432
Q ss_pred ccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCccccccc
Q 003878 267 TETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKR 346 (789)
Q Consensus 267 ~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~ 346 (789)
...+..+...+... .+..... +........++++|++|+....+ ..|.++|+.++...
T Consensus 128 -------~~~~~~~~~~~~~~-~~~~~~~--~~~~~~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~~~------- 185 (318)
T 4ggc_A 128 -------SGHIHHHDVRVAEH-HVATLSG--HSQEVCGLRWAPDGRHLASGGND-----NLVNVWPSAPGEGG------- 185 (318)
T ss_dssp -------TSEEEEEETTSSSC-EEEEEEC--CSSCEEEEEECTTSSEEEEEETT-----SCEEEEESSCBTTB-------
T ss_pred -------CCceEeeecCCCce-eEEEEcC--ccCceEEEEEcCCCCEEEEEecC-----cceeEEECCCCccc-------
Confidence 22355555544322 2222332 23335578899999998765533 34888898875311
Q ss_pred CCCCccEeeeccccc-eeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEE
Q 003878 347 DGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 425 (789)
Q Consensus 347 ~~~~~~~~l~~~~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~ 425 (789)
............. ....+++++..++..... .....|..++..... ........ ..+..+.+.+++..++...
T Consensus 186 --~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~i~lwd~~~~~-~~~~~~~~--~~v~~~~~~~~~~~~~~~s 259 (318)
T 4ggc_A 186 --WVPLQTFTQHQGAVKAVAWCPWQSNVLATGGG-TSDRHIRIWNVCSGA-CLSAVDAH--SQVCSILWSPHYKELISGH 259 (318)
T ss_dssp --SCCSEEECCCCSCEEEEEECTTSTTEEEEEEC-TTTCEEEEEETTTCC-EEEEEECS--SCEEEEEEETTTTEEEEEE
T ss_pred --ccceeeecccCCceEEEEecCCCCcEEEEEec-CCCCEEEEEeccccc-ccccccce--eeeeeeeecccccceEEEE
Confidence 0111111111111 123367766655544332 235678888887765 22222222 3355666666444333333
Q ss_pred eCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCC
Q 003878 426 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 485 (789)
Q Consensus 426 ~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~t 485 (789)
......|++||+.+++.+..+..+.+.|..++++|+++.|+ +.+ .-.++..||+.+
T Consensus 260 g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~-S~s---~D~~v~iWd~~~ 315 (318)
T 4ggc_A 260 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVA-SAA---ADETLRLWRCFE 315 (318)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEE-EEE---TTTEEEEECCSC
T ss_pred EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEE-EEe---cCCeEEEEECCC
Confidence 22223799999998988778877777888999999998655 332 235788888754
No 302
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.99 E-value=7.2e-08 Score=103.89 Aligned_cols=247 Identities=13% Similarity=0.015 Sum_probs=150.5
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCc--eecccccccccccccCccceeeeeeccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQI--VEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLY 207 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 207 (789)
+...+..+++||||++||.+.. ...|++||+.++. .+. .+... .+
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~-~~~~h-------~~-------------------- 56 (379)
T 3jrp_A 10 HNELIHDAVLDYYGKRLATCSS-----DKTIKIFEVEGETHKLID-TLTGH-------EG-------------------- 56 (379)
T ss_dssp CCCCEEEEEECSSSSEEEEEET-----TSCEEEEEEETTEEEEEE-EECCC-------SS--------------------
T ss_pred CcccEEEEEEcCCCCEEEEEEC-----CCcEEEEecCCCcceeee-EecCC-------CC--------------------
Confidence 3345788999999999986543 2369999998442 221 11111 00
Q ss_pred cccceeeEEEeeeccccceeeeeeecccccceEEEEeC--CcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCC
Q 003878 208 LRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHD--SKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK 285 (789)
Q Consensus 208 ~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspD--g~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~ 285 (789)
....++|+|+ ++.|+....+ ..|++|++.+.
T Consensus 57 ----------------------------~v~~~~~~~~~~~~~l~s~~~d-------------------g~v~iwd~~~~ 89 (379)
T 3jrp_A 57 ----------------------------PVWRVDWAHPKFGTILASCSYD-------------------GKVLIWKEENG 89 (379)
T ss_dssp ----------------------------CEEEEEECCGGGCSEEEEEETT-------------------SCEEEEEEETT
T ss_pred ----------------------------cEEEEEeCCCCCCCEEEEeccC-------------------CEEEEEEcCCC
Confidence 2478999988 8888765432 24788887664
Q ss_pred CCCcEEEEecCCCCeeEEEEEEecC--CcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccc-e
Q 003878 286 QSEDILCWKDPEHPKYIFSGHVTED--GQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-Q 362 (789)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-~ 362 (789)
.......+. .+...+..+.|+|+ |++|+.... ...|.++|+.++. ......+...... .
T Consensus 90 ~~~~~~~~~--~~~~~v~~~~~~~~~~~~~l~~~~~-----d~~i~v~d~~~~~-----------~~~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 90 RWSQIAVHA--VHSASVNSVQWAPHEYGPLLLVASS-----DGKVSVVEFKENG-----------TTSPIIIDAHAIGVN 151 (379)
T ss_dssp EEEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEET-----TSEEEEEECCTTS-----------CCCEEEEECCTTCEE
T ss_pred ceeEeeeec--CCCcceEEEEeCCCCCCCEEEEecC-----CCcEEEEecCCCC-----------ceeeEEecCCCCceE
Confidence 322222232 23445678999999 898887653 3458899988742 1111122121111 1
Q ss_pred eEEEec-------------CCCEEEEEECCCCCCceEEEEECCCCCC-e---EEeccCCCCceeeeEEEecC---CEEEE
Q 003878 363 YEVIAN-------------DDTVFTFLTNKDAPKYKIIRVDLKEPND-W---FEVIPEAERDVLESATAVNL---NQMIV 422 (789)
Q Consensus 363 ~~~~s~-------------dG~~l~~~tn~~~~~~~L~~~dl~~~~~-~---~~l~~~~~~~~i~~v~~~~~---~~lv~ 422 (789)
...|+| +++.|+..+.. +.|..+|+.++.. + ..+..+ ...+..+.++++ +.+++
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d----g~i~i~d~~~~~~~~~~~~~~~~h--~~~v~~~~~sp~~~~~~~l~ 225 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGAD----NLVKIWKYNSDAQTYVLESTLEGH--SDWVRDVAWSPTVLLRSYLA 225 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEETT----SCEEEEEEETTTTEEEEEEEECCC--SSCEEEEEECCCCSSSEEEE
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeCC----CeEEEEEecCCCcceeeEEEEecc--cCcEeEEEECCCCCCCCeEE
Confidence 234777 67777765433 4678888765541 1 122222 256788999997 68888
Q ss_pred EEEeCCeEEEEEEECCCCc---eeeeccc--CCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 423 SYLSDVKYVLQIRDLKNGS---LLHQLPI--EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 423 ~~~~~g~~~L~~~dl~tG~---~~~~l~~--~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
+...++ .|.+|++.+++ ....+.. ....+..+.++++++.++.... -+.++.|++.++
T Consensus 226 s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~----dg~i~iw~~~~~ 288 (379)
T 3jrp_A 226 SVSQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG----DNKVTLWKENLE 288 (379)
T ss_dssp EEETTS--CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEES----SSSEEEEEEEET
T ss_pred EEeCCC--EEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecC----CCcEEEEeCCCC
Confidence 888887 68888887663 1122222 3556778899999987665432 356777777644
No 303
>1ea5_A ACHE, acetylcholinesterase; hydrolase, serine hydrolase, neurotransmitter cleavage, catalytic triad, alpha/beta hydrolase; HET: NAG; 1.80A {Torpedo californica} SCOP: c.69.1.1 PDB: 1ax9_A* 1amn_A* 1cfj_A* 1fss_A* 1gpk_A* 1gpn_A* 1oce_A* 1qid_A 1qie_A 1qif_A 1qig_A 1qih_A 1qii_A 1qij_A 1qik_A 1qim_A 1qti_A* 1vot_A* 1vxo_A* 1vxr_A* ...
Probab=98.98 E-value=2.6e-10 Score=130.41 Aligned_cols=222 Identities=18% Similarity=0.176 Sum_probs=131.4
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC---CCCCHHHHHHHHcCCeEEEEEeecCCC-CCChhHHhcc
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT---PSFSVSRTILMRHLGAVFCIANIRGGG-EYGEEWHKGG 590 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~g~~~~~~~ 590 (789)
+.|. ..+ -++.|+.. .++.|+||++|||...... ..+.. ..++.+.|++|+.+|||.+. +|...- ..
T Consensus 91 sedc-l~l--nv~~P~~~--~~~~Pv~v~iHGG~~~~g~~~~~~~~~--~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~ 161 (537)
T 1ea5_A 91 SEDC-LYL--NIWVPSPR--PKSTTVMVWIYGGGFYSGSSTLDVYNG--KYLAYTEEVVLVSLSYRVGAFGFLALH--GS 161 (537)
T ss_dssp CSCC-CEE--EEEECSSC--CSSEEEEEEECCSTTTCCCTTCGGGCT--HHHHHHHTCEEEECCCCCHHHHHCCCT--TC
T ss_pred CCcC-CeE--EEeccCCC--CCCCeEEEEECCCcccCCCCCCCccCh--HHHHhcCCEEEEEeccCccccccccCC--CC
Confidence 5677 444 55678753 3678999999998543332 22443 34554589999999999541 111000 00
Q ss_pred cccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHh--CCCceeEEEecCCccccccccc-cc--
Q 003878 591 ALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVMDMLRYHK-FT-- 662 (789)
Q Consensus 591 ~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~--~pd~f~a~v~~~p~~d~~~~~~-~~-- 662 (789)
....+...+.|.+++++|+.++- -.||+||.|+|+|+||.+++.++.. .+.+|+++|+++|......... ..
T Consensus 162 ~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vtl~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~~~~~~~~~ 241 (537)
T 1ea5_A 162 QEAPGNVGLLDQRMALQWVHDNIQFFGGDPKTVTIFGESAGGASVGMHILSPGSRDLFRRAILQSGSPNCPWASVSVAEG 241 (537)
T ss_dssp SSSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCHHHHTTCSEEEEESCCTTCTTSCBCHHHH
T ss_pred CCCcCccccHHHHHHHHHHHHHHHHhCCCccceEEEecccHHHHHHHHHhCccchhhhhhheeccCCccCCccccCHHHH
Confidence 11223345899999999998762 3699999999999999999888765 2468999999999654221110 00
Q ss_pred --CCccchhhcCCCC--cHHHHHHHHhcCcccCCCCCC---CCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHh
Q 003878 663 --IGHAWVSDFGCSE--EEEEFYWLIKYSPLHNVRRPW---EQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 735 (789)
Q Consensus 663 --~~~~~~~e~g~p~--~~~~~~~l~~~sP~~~v~~~~---~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~ 735 (789)
.........|++. ..+..+.|++.++-..+.... ...........|+ -|..+-+.++.++.+.-+..
T Consensus 242 ~~~~~~~a~~lgc~~~~~~~~~~cLr~~~~~~l~~a~~~~~~~~~~~~~~f~Pv------vDg~~lp~~p~~~~~~g~~~ 315 (537)
T 1ea5_A 242 RRRAVELGRNLNCNLNSDEELIHCLREKKPQELIDVEWNVLPFDSIFRFSFVPV------IDGEFFPTSLESMLNSGNFK 315 (537)
T ss_dssp HHHHHHHHHHTTCCCSSHHHHHHHHHHSCHHHHHHHGGGGCSSSCSSCCSSCCB------CCSSSSSSCHHHHHHHTCSC
T ss_pred HHHHHHHHHHcCCCCCCHHHHHHHHhhCCHHHHHHHHhhhccccccccccceee------ECcccCCcCHHHHHhcCCCC
Confidence 0011223456652 334567777765432211100 0000000113344 35556666666665443322
Q ss_pred hccCCCCCCCCCcEEEEEeCCCCcCC
Q 003878 736 LCTSLENSPQTNPIIGRIERKAGHGV 761 (789)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~~~~~gH~~ 761 (789)
++|+.+-...++|+.+
T Consensus 316 ----------~vp~liG~~~~Eg~~f 331 (537)
T 1ea5_A 316 ----------KTQILLGVNKDEGSFF 331 (537)
T ss_dssp ----------CSCEEEEEETBTTHHH
T ss_pred ----------CCCEEEeeecchhHHH
Confidence 7899999999999753
No 304
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.98 E-value=1.9e-08 Score=110.55 Aligned_cols=254 Identities=12% Similarity=0.080 Sum_probs=149.3
Q ss_pred CcEEEEeEEeCC-CCcEEEEEEecCCceEEEEEEEEcCCCceecc---cccccccccccCccceeeeeeccccccccccc
Q 003878 130 GTAALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIVEAD---ALSWVCFCFSHSFGYFFHLTISLLNVPTYKLF 205 (789)
Q Consensus 130 ~~~~~~~~~~Sp-Dg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 205 (789)
+...+..++||| |+++||.+. ...+|++||+.++..... .+... ..|.+
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s-----~dg~v~vw~~~~~~~~~~~~~~~~~~----~~h~~------------------ 132 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGS-----EDCTVMVWEIPDGGLVLPLREPVITL----EGHTK------------------ 132 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEE-----TTSEEEEEECCTTCCSSCBCSCSEEE----ECCSS------------------
T ss_pred CCCCEEEEEeCCCCCCEEEEEe-----CCCeEEEEEccCCCCccccCCceEEe----cCCCC------------------
Confidence 445688999999 899888543 234799999998843210 00000 00000
Q ss_pred cccccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCC
Q 003878 206 LYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK 285 (789)
Q Consensus 206 ~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~ 285 (789)
....++|+|||+.++++.. ....|++|++.++
T Consensus 133 ------------------------------~v~~~~~~p~~~~~l~s~~------------------~dg~i~iwd~~~~ 164 (402)
T 2aq5_A 133 ------------------------------RVGIVAWHPTAQNVLLSAG------------------CDNVILVWDVGTG 164 (402)
T ss_dssp ------------------------------CEEEEEECSSBTTEEEEEE------------------TTSCEEEEETTTT
T ss_pred ------------------------------eEEEEEECcCCCCEEEEEc------------------CCCEEEEEECCCC
Confidence 2578999999954444432 1234889998764
Q ss_pred CCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEee-ecccc--ce
Q 003878 286 QSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL-IDGFD--AQ 362 (789)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l-~~~~~--~~ 362 (789)
. .+..+....+...+..+.|+|||++|+.... ...|+++|+.++. ....+ ..... ..
T Consensus 165 ~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-----d~~i~iwd~~~~~-------------~~~~~~~~~~~~~~~ 224 (402)
T 2aq5_A 165 A--AVLTLGPDVHPDTIYSVDWSRDGALICTSCR-----DKRVRVIEPRKGT-------------VVAEKDRPHEGTRPV 224 (402)
T ss_dssp E--EEEEECTTTCCSCEEEEEECTTSSCEEEEET-----TSEEEEEETTTTE-------------EEEEEECSSCSSSCC
T ss_pred C--ccEEEecCCCCCceEEEEECCCCCEEEEEec-----CCcEEEEeCCCCc-------------eeeeeccCCCCCcce
Confidence 2 2223311233445678999999999987653 3569999998742 12222 11111 12
Q ss_pred eEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCE-EEEEEEeCCeEEEEEEECCCCc
Q 003878 363 YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGS 441 (789)
Q Consensus 363 ~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl~tG~ 441 (789)
...|+++|+.|+...+. ..+..|..+|+.+++....+........+..+.+++++. +++....++ .|++|++.+++
T Consensus 225 ~~~~~~~~~~l~~g~~~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg--~i~i~d~~~~~ 301 (402)
T 2aq5_A 225 HAVFVSEGKILTTGFSR-MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDS--SIRYFEITSEA 301 (402)
T ss_dssp EEEECSTTEEEEEEECT-TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCS--CEEEEEECSST
T ss_pred EEEEcCCCcEEEEeccC-CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCC--eEEEEEecCCC
Confidence 34589988766543322 346789999998765211122211124467788888544 445554565 68889988776
Q ss_pred e-eeeccc--CCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 442 L-LHQLPI--EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 442 ~-~~~l~~--~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
. ...+.. ....+..+.++|++..++ + .-..+..|++.+++
T Consensus 302 ~~~~~l~~~~~~~~v~~~~~sp~~~~~~---s---~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 302 PFLHYLSMFSSKESQRGMGYMPKRGLEV---N---KCEIARFYKLHERK 344 (402)
T ss_dssp TCEEEEEEECCSSCCSEEEECCGGGSCG---G---GTEEEEEEEEETTE
T ss_pred cceEeecccccCCcccceEEecccccce---e---cceeEEEEEcCCCc
Confidence 3 233322 134566778888876432 1 22367777777764
No 305
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=98.97 E-value=9.5e-09 Score=112.80 Aligned_cols=242 Identities=12% Similarity=0.022 Sum_probs=142.6
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCC---Cc-eecccccccccccccCccceeeeeeccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIED---QI-VEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLY 207 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~t---g~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 207 (789)
..+..++|||||++||.+.. ...|++||+.+ +. .+. .+... .+.. .+..+.|++.
T Consensus 68 ~~v~~~~~s~~~~~l~~~~~-----dg~v~vw~~~~~~~~~~~~~-~~~~h-------~~~v----~~~~~~~~~~---- 126 (416)
T 2pm9_A 68 SKFNDLDWSHNNKIIAGALD-----NGSLELYSTNEANNAINSMA-RFSNH-------SSSV----KTVKFNAKQD---- 126 (416)
T ss_dssp SCEEEEEECSSSSCEEEEES-----SSCEEEECCSSTTSCCCEEE-ECCCS-------SSCC----CEEEECSSST----
T ss_pred CceEEEEECCCCCeEEEEcc-----CCeEEEeecccccccccchh-hccCC-------ccce----EEEEEcCCCC----
Confidence 45788999999999986543 33699999988 21 221 11111 1101 1112234411
Q ss_pred cccceeeEEEeeeccccceeeeeeecc-------------------cccceEEEEeCCcEEEEEEccCCCCCCCCCCCcc
Q 003878 208 LRGIFFFFYLFSLVKSTIYSFWSVVSQ-------------------FKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTE 268 (789)
Q Consensus 208 ~~~~~~~~~~~~s~~~g~~~l~~~~~~-------------------~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~ 268 (789)
.+++++..+|...+|.+... -....++|+||+..++++..
T Consensus 127 -------~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-------------- 185 (416)
T 2pm9_A 127 -------NVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAG-------------- 185 (416)
T ss_dssp -------TBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEES--------------
T ss_pred -------CEEEEEcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEc--------------
Confidence 46788888999999976541 12357899999544444422
Q ss_pred ccCCcccEEEEEECCCCCCCcEEEEecCC----CCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCccccc
Q 003878 269 TDSNLYHEFYYHFLGTKQSEDILCWKDPE----HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFK 344 (789)
Q Consensus 269 ~~~~~~~~i~~~~lg~~~~~~~~~~~~~~----~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~ 344 (789)
....|++|++.+.. .+..+.... +...+..+.|+|+|..+++...... ....|+++|+.++.
T Consensus 186 ----~dg~v~iwd~~~~~--~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~-~~~~i~~~d~~~~~------- 251 (416)
T 2pm9_A 186 ----SSNFASIWDLKAKK--EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSD-NDPSILIWDLRNAN------- 251 (416)
T ss_dssp ----SSSCEEEEETTTTE--EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCS-SSCCCCEEETTSTT-------
T ss_pred ----CCCCEEEEECCCCC--cceEEeccccccccCCceEEEEECCCCCCEEEEEECCC-CCceEEEEeCCCCC-------
Confidence 22348888887643 222233221 0234678999999864444443221 11258889998742
Q ss_pred ccCCCCccEeee-ccccc-eeEEEec-CCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCC-EE
Q 003878 345 KRDGLLPFVKLI-DGFDA-QYEVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QM 420 (789)
Q Consensus 345 ~~~~~~~~~~l~-~~~~~-~~~~~s~-dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~-~l 420 (789)
.+...+. ..... ....|+| +++.|+..+. ++.|..+|+.+++....+..+. ..+..+.+++++ .+
T Consensus 252 -----~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~----dg~v~~wd~~~~~~~~~~~~~~--~~v~~~~~s~~~~~~ 320 (416)
T 2pm9_A 252 -----TPLQTLNQGHQKGILSLDWCHQDEHLLLSSGR----DNTVLLWNPESAEQLSQFPARG--NWCFKTKFAPEAPDL 320 (416)
T ss_dssp -----SCSBCCCSCCSSCEEEEEECSSCSSCEEEEES----SSEEEEECSSSCCEEEEEECSS--SCCCCEEECTTCTTE
T ss_pred -----CCcEEeecCccCceeEEEeCCCCCCeEEEEeC----CCCEEEeeCCCCccceeecCCC--CceEEEEECCCCCCE
Confidence 1111121 11111 2234888 7777665443 4679999998876334443333 457789999865 68
Q ss_pred EEEEEeCCeEEEEEEECCCCce
Q 003878 421 IVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 421 v~~~~~~g~~~L~~~dl~tG~~ 442 (789)
+++...++ .|.+|++.+++.
T Consensus 321 l~s~~~d~--~i~iw~~~~~~~ 340 (416)
T 2pm9_A 321 FACASFDN--KIEVQTLQNLTN 340 (416)
T ss_dssp EEECCSSS--EEEEEESCCCCC
T ss_pred EEEEecCC--cEEEEEccCCCC
Confidence 88887776 788999876553
No 306
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.97 E-value=8.2e-08 Score=104.24 Aligned_cols=165 Identities=15% Similarity=0.059 Sum_probs=87.7
Q ss_pred EEEEEEecCCcEEEEEEEcCCCCceEEEEEECC-CCCCCcccccccCCCCccEeee--c-cccceeEEEecCCCEEEEEE
Q 003878 302 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS-ALPEGLEGFKKRDGLLPFVKLI--D-GFDAQYEVIANDDTVFTFLT 377 (789)
Q Consensus 302 ~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~-~g~~~~~~~~~~~~~~~~~~l~--~-~~~~~~~~~s~dG~~l~~~t 377 (789)
...+.|||||++|++.. .+ ...|++++++ ++. ......+. . +.......|+|||+.+|+..
T Consensus 147 ~~~~~~spdG~~l~~~~-~~---~~~v~~~~~~~~g~-----------~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~ 211 (365)
T 1jof_A 147 IHGMVFDPTETYLYSAD-LT---ANKLWTHRKLASGE-----------VELVGSVDAPDPGDHPRWVAMHPTGNYLYALM 211 (365)
T ss_dssp EEEEEECTTSSEEEEEE-TT---TTEEEEEEECTTSC-----------EEEEEEEECSSTTCCEEEEEECTTSSEEEEEE
T ss_pred ceEEEECCCCCEEEEEc-CC---CCEEEEEEECCCCC-----------EEEeeeEecCCCCCCCCEeEECCCCCEEEEEE
Confidence 45789999999986543 22 3568999887 542 00011111 1 22223345899999998765
Q ss_pred CCCCCCceEEEEECCCCCCeE----E--eccCCC-C-c-------eeeeEE-EecCCE-EEEEEEeCC---eEEEEEEEC
Q 003878 378 NKDAPKYKIIRVDLKEPNDWF----E--VIPEAE-R-D-------VLESAT-AVNLNQ-MIVSYLSDV---KYVLQIRDL 437 (789)
Q Consensus 378 n~~~~~~~L~~~dl~~~~~~~----~--l~~~~~-~-~-------~i~~v~-~~~~~~-lv~~~~~~g---~~~L~~~dl 437 (789)
..+ ....++.++.++++ .. . .++... . . ...++. ++++++ |++..+.+. ...|.+|++
T Consensus 212 ~~~-~~v~v~~~~~~~g~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~ 289 (365)
T 1jof_A 212 EAG-NRICEYVIDPATHM-PVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKL 289 (365)
T ss_dssp TTT-TEEEEEEECTTTCC-EEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEE
T ss_pred CCC-CeEEEEEEeCCCCc-EEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEE
Confidence 432 23344445554554 21 1 223220 1 1 467788 888654 554443332 126788887
Q ss_pred C-CCceeee---cccCCeeEEEeeccc---CCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 438 K-NGSLLHQ---LPIEIGSVNAISARR---EDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 438 ~-tG~~~~~---l~~~~~~v~~~s~s~---d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
+ +|+.... +.........++++| |++.+++... .-.++..|+.+.+
T Consensus 290 ~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~---~~~~v~v~~~~~~ 342 (365)
T 1jof_A 290 RDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDD---QEGWLEIYRWKDE 342 (365)
T ss_dssp CTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECS---SSCEEEEEEEETT
T ss_pred CCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEc---CCCeEEEEEEchh
Confidence 5 5664221 211111223456678 7888776532 1256666666544
No 307
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=98.97 E-value=6.1e-08 Score=106.63 Aligned_cols=250 Identities=8% Similarity=-0.008 Sum_probs=148.4
Q ss_pred EeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceee
Q 003878 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFF 214 (789)
Q Consensus 135 ~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 214 (789)
....++|||++||.+.. ...|++||+.+++.... +... .+
T Consensus 101 ~~~~~~~~~~~l~~~~~-----dg~i~iwd~~~~~~~~~-~~~h-------~~--------------------------- 140 (420)
T 3vl1_A 101 AVDTAKLQMRRFILGTT-----EGDIKVLDSNFNLQREI-DQAH-------VS--------------------------- 140 (420)
T ss_dssp EEEEECSSSCEEEEEET-----TSCEEEECTTSCEEEEE-TTSS-------SS---------------------------
T ss_pred EEEEEecCCCEEEEEEC-----CCCEEEEeCCCcceeee-cccc-------cC---------------------------
Confidence 34468999999986543 23699999998865431 1111 00
Q ss_pred EEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEe
Q 003878 215 FYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWK 294 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~ 294 (789)
....++|+||++.|+....+ ..|++|++.+.... ..+.
T Consensus 141 ---------------------~v~~~~~~~~~~~l~s~s~d-------------------~~i~iwd~~~~~~~--~~~~ 178 (420)
T 3vl1_A 141 ---------------------EITKLKFFPSGEALISSSQD-------------------MQLKIWSVKDGSNP--RTLI 178 (420)
T ss_dssp ---------------------CEEEEEECTTSSEEEEEETT-------------------SEEEEEETTTCCCC--EEEE
T ss_pred ---------------------ccEEEEECCCCCEEEEEeCC-------------------CeEEEEeCCCCcCc--eEEc
Confidence 25789999999988765432 36899999765432 2333
Q ss_pred cCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccc-cCCCCccEeee--c----------cccc
Q 003878 295 DPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK-RDGLLPFVKLI--D----------GFDA 361 (789)
Q Consensus 295 ~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~l~--~----------~~~~ 361 (789)
. +...+..+.|+|||++|+....+ ..|.++|+.++... ..+.. .........+. . ....
T Consensus 179 ~--h~~~v~~~~~~~~~~~l~s~~~d-----~~v~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v 250 (420)
T 3vl1_A 179 G--HRATVTDIAIIDRGRNVLSASLD-----GTIRLWECGTGTTI-HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKK 250 (420)
T ss_dssp C--CSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTEEE-EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCC
T ss_pred C--CCCcEEEEEEcCCCCEEEEEcCC-----CcEEEeECCCCcee-EEeecCCCCCCCccEEEEecCCcceeeecccCcc
Confidence 3 23446789999999999866533 34888898764210 00000 00000000000 0 0000
Q ss_pred eeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCE-EEEEEEeCCeEEEEEEECCCC
Q 003878 362 QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNG 440 (789)
Q Consensus 362 ~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl~tG 440 (789)
....|+|+|+.|+..+. ++.|..+|+.+++....+ .......+..+.+++++. ++++...++ .|++||+.++
T Consensus 251 ~~~~~s~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~~l~~g~~dg--~i~vwd~~~~ 323 (420)
T 3vl1_A 251 NNLEFGTYGKYVIAGHV----SGVITVHNVFSKEQTIQL-PSKFTCSCNSLTVDGNNANYIYAGYENG--MLAQWDLRSP 323 (420)
T ss_dssp CTTCSSCTTEEEEEEET----TSCEEEEETTTCCEEEEE-CCTTSSCEEEEEECSSCTTEEEEEETTS--EEEEEETTCT
T ss_pred cceEEcCCCCEEEEEcC----CCeEEEEECCCCceeEEc-ccccCCCceeEEEeCCCCCEEEEEeCCC--eEEEEEcCCC
Confidence 01126788887765443 356999999887633333 222235688899998655 788888887 7999999877
Q ss_pred ce-eeeccc-CCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 441 SL-LHQLPI-EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 441 ~~-~~~l~~-~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
+. ...+.. ....+..+.+ ++++ ++++. ..-+.+..|++.+.
T Consensus 324 ~~~~~~~~~~~~~~v~~~~~-~~~~-~l~s~---~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 324 ECPVGEFLINEGTPINNVYF-AAGA-LFVSS---GFDTSIKLDIISDP 366 (420)
T ss_dssp TSCSEEEEESTTSCEEEEEE-ETTE-EEEEE---TTTEEEEEEEECCT
T ss_pred cCchhhhhccCCCCceEEEe-CCCC-EEEEe---cCCccEEEEeccCC
Confidence 53 344443 2444555533 4555 33333 23468888887664
No 308
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=98.97 E-value=1.2e-07 Score=100.71 Aligned_cols=168 Identities=11% Similarity=-0.053 Sum_probs=93.1
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC-CcEE--EEecCCCCeeEEEEEEecCCcE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS-EDIL--CWKDPEHPKYIFSGHVTEDGQY 313 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~-~~~~--~~~~~~~~~~~~~~~~SpDG~~ 313 (789)
...++|+|||+.|++... ....|+++++.+... .... ....+. ......+.|+|||++
T Consensus 131 ~~~~~~s~dg~~l~~~~~------------------~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pdg~~ 191 (343)
T 1ri6_A 131 CHSANISPDNRTLWVPAL------------------KQDRICLFTVSDDGHLVAQDPAEVTTVE-GAGPRHMVFHPNEQY 191 (343)
T ss_dssp BCCCEECTTSSEEEEEEG------------------GGTEEEEEEECTTSCEEEEEEEEEECST-TCCEEEEEECTTSSE
T ss_pred ceEEEECCCCCEEEEecC------------------CCCEEEEEEecCCCceeeecccccccCC-CCCcceEEECCCCCE
Confidence 367899999999987642 223588888865221 1111 222221 123456899999999
Q ss_pred EEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee---ccc----cceeEEEecCCCEEEEEECCCCCCceE
Q 003878 314 LVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI---DGF----DAQYEVIANDDTVFTFLTNKDAPKYKI 386 (789)
Q Consensus 314 l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~---~~~----~~~~~~~s~dG~~l~~~tn~~~~~~~L 386 (789)
|++.... ...+.++++...... ........ .+. ......|+|||+.||+.... +..|
T Consensus 192 l~~~~~~----~~~i~~~~~~~~~g~---------~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~---~~~i 255 (343)
T 1ri6_A 192 AYCVNEL----NSSVDVWELKDPHGN---------IECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRT---ASLI 255 (343)
T ss_dssp EEEEETT----TTEEEEEESSCTTSC---------CEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETT---TTEE
T ss_pred EEEEeCC----CCEEEEEEecCCCCc---------EEEEeeccccCccccccCCccceEECCCCCEEEEEecC---CCEE
Confidence 8876522 356888888531100 00011111 110 01124589999988765532 3578
Q ss_pred EEEECC--CCCCeEEe--ccCCCCceeeeEEEecCCE-EEEEEEeCCeEEEEEEECCCCce
Q 003878 387 IRVDLK--EPNDWFEV--IPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 387 ~~~dl~--~~~~~~~l--~~~~~~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl~tG~~ 442 (789)
.+++++ ++. .+.+ ++.. ..+..+++++++. +++....++.-.++.+|.++|+.
T Consensus 256 ~v~d~~~~~~~-~~~~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~v~v~~~d~~~g~~ 313 (343)
T 1ri6_A 256 TVFSVSEDGSV-LSKEGFQPTE--TQPRGFNVDHSGKYLIAAGQKSHHISVYEIVGEQGLL 313 (343)
T ss_dssp EEEEECTTSCC-EEEEEEEECS--SSCCCEEECTTSSEEEEECTTTCEEEEEEEETTTTEE
T ss_pred EEEEEcCCCCc-eEEeeeecCC--CccceEEECCCCCEEEEecCCCCeEEEEEEcCCCcee
Confidence 888876 333 2222 2222 2266788988655 55444355544555557776654
No 309
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.96 E-value=1.4e-07 Score=111.73 Aligned_cols=280 Identities=10% Similarity=0.083 Sum_probs=161.7
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
|+-.|..++++|++..++.+.+. ..+|++||+.++.......... +..|.+. ..+..+.|++
T Consensus 381 H~~~V~~v~~~~~~~~~l~s~s~----D~~i~~W~~~~~~~~~~~~~~~---~~~h~~~----v~~v~~s~~g------- 442 (694)
T 3dm0_A 381 HTDMVTAIATPIDNADIIVSASR----DKSIILWKLTKDDKAYGVAQRR---LTGHSHF----VEDVVLSSDG------- 442 (694)
T ss_dssp CSSCEEEEECCTTCCSEEEEEET----TSEEEEEECCCSTTCSCEEEEE---EECCSSC----EEEEEECTTS-------
T ss_pred CCceeEEEEecCCCCCEEEEEeC----CCcEEEEEccCCCcccccccce---ecCCCCc----EEEEEECCCC-------
Confidence 44567889999987544444333 3489999998753211000000 0111111 1122334566
Q ss_pred cceeeEEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEE
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 279 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 279 (789)
++++++..+|+..||.+.. .-...+++|+|||+.|+-...+ ..|.+
T Consensus 443 -----~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D-------------------~~i~i 498 (694)
T 3dm0_A 443 -----QFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRD-------------------RTIKL 498 (694)
T ss_dssp -----SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETT-------------------SCEEE
T ss_pred -----CEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCC-------------------CEEEE
Confidence 4778889999999998754 1124678999999998866433 24777
Q ss_pred EECCCCCCCcEEEEe-cCCCCeeEEEEEEecCCcE-EEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec
Q 003878 280 HFLGTKQSEDILCWK-DPEHPKYIFSGHVTEDGQY-LVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID 357 (789)
Q Consensus 280 ~~lg~~~~~~~~~~~-~~~~~~~~~~~~~SpDG~~-l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~ 357 (789)
|++.... ...+.. ...+...+..+.|+|++.. ++++... ...|.++|+.++. ....+..
T Consensus 499 wd~~~~~--~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~----d~~v~vwd~~~~~-------------~~~~~~~ 559 (694)
T 3dm0_A 499 WNTLGEC--KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW----DKTVKVWNLSNCK-------------LRSTLAG 559 (694)
T ss_dssp ECTTSCE--EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET----TSCEEEEETTTCC-------------EEEEECC
T ss_pred EECCCCc--ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC----CCeEEEEECCCCc-------------EEEEEcC
Confidence 7764321 111111 1123445678899999842 3333322 2448889988642 1222222
Q ss_pred ccccee-EEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEE
Q 003878 358 GFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRD 436 (789)
Q Consensus 358 ~~~~~~-~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~d 436 (789)
...... ..|+|+|+.|+..+. ++.|..+|+.+++.... +. ....+..+.+++++.+++....+ .|++||
T Consensus 560 h~~~v~~v~~spdg~~l~sg~~----Dg~i~iwd~~~~~~~~~-~~--~~~~v~~~~~sp~~~~l~~~~~~---~i~iwd 629 (694)
T 3dm0_A 560 HTGYVSTVAVSPDGSLCASGGK----DGVVLLWDLAEGKKLYS-LE--ANSVIHALCFSPNRYWLCAATEH---GIKIWD 629 (694)
T ss_dssp CSSCEEEEEECTTSSEEEEEET----TSBCEEEETTTTEEEEC-CB--CSSCEEEEEECSSSSEEEEEETT---EEEEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeC----CCeEEEEECCCCceEEE-ec--CCCcEEEEEEcCCCcEEEEEcCC---CEEEEE
Confidence 222222 348999998775433 46788899987752221 22 23567889999866666665544 499999
Q ss_pred CCCCceeeecccC-------------------CeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 437 LKNGSLLHQLPIE-------------------IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 437 l~tG~~~~~l~~~-------------------~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
+.+++.+..+... ...+..++++++++.|+... .-+.+..|++.
T Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg~~l~sgs----~Dg~i~iW~i~ 692 (694)
T 3dm0_A 630 LESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADGSTLFSGY----TDGVIRVWGIG 692 (694)
T ss_dssp TTTTEEEEEECCCCC----------------CCCCEEEEEECTTSSEEEEEE----TTSEEEEEEC-
T ss_pred CCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCCCEEEEEc----CCCeEEEEecc
Confidence 9887655444321 01245678899998766332 23577777763
No 310
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.96 E-value=2.3e-07 Score=99.40 Aligned_cols=295 Identities=10% Similarity=-0.002 Sum_probs=163.2
Q ss_pred CcEEEEeEEeCCC---CcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccc
Q 003878 130 GTAALIKVSVSED---AKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFL 206 (789)
Q Consensus 130 ~~~~~~~~~~SpD---g~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 206 (789)
+...+..+++||+ |+.++++....| .|++||+.+++.+. .+..... ..+.+....+..++-..+++
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~~~----~v~vw~~~~~~~~~-~~~~~~~--~~~~~~v~~~~~~~~~~~~~---- 85 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVGSN----RVTLYECHSQGEIR-LLQSYVD--ADADENFYTCAWTYDSNTSH---- 85 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEETT----EEEEEEECGGGCEE-EEEEEEC--SCTTCCEEEEEEEECTTTCC----
T ss_pred CCCceEEEEEecccCCCCceEEEECCCC----EEEEEEcCCCcEEE-eeeeccc--cCCCCcEEEEEeccCCCCCC----
Confidence 3445788999985 665555554333 69999999886542 1111000 00011112222222211113
Q ss_pred ccccceeeEEEeeeccccceeeeeeec----------ccccceEEEEe-CCcEEEEEEccCCCCCCCCCCCccccCCccc
Q 003878 207 YLRGIFFFFYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTH-DSKGFFYSRYPAPKEGKDMDAGTETDSNLYH 275 (789)
Q Consensus 207 ~~~~~~~~~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wsp-Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~ 275 (789)
.+++++..+|...+|.+.. .-....++|+| |++.|+....+ .
T Consensus 86 --------~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~d-------------------g 138 (366)
T 3k26_A 86 --------PLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKD-------------------H 138 (366)
T ss_dssp --------EEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETT-------------------S
T ss_pred --------CEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCC-------------------C
Confidence 4788888999999998654 22246789999 88877765432 3
Q ss_pred EEEEEECCCCCCCcEEEEec-CCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccc------cccCC
Q 003878 276 EFYYHFLGTKQSEDILCWKD-PEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGF------KKRDG 348 (789)
Q Consensus 276 ~i~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~------~~~~~ 348 (789)
.|++|++.++. ....+.. ..+...+..+.|+|||++|+....+ ..|.++|+.++... ..+ .++..
T Consensus 139 ~i~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~-~~~~~~~~~~~~~~ 210 (366)
T 3k26_A 139 ALRLWNIQTDT--LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMD-----HSLKLWRINSKRMM-NAIKESYDYNPNKT 210 (366)
T ss_dssp CEEEEETTTTE--EEEEECSTTSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEESCSHHHH-HHHHHHHTCCGGGC
T ss_pred eEEEEEeecCe--EEEEecccccccCceeEEEECCCCCEEEEecCC-----CCEEEEECCCCccc-cccceeEEecCCCC
Confidence 48889987642 2233311 2234457789999999998876543 34888898763100 000 00000
Q ss_pred CCc----------cEeeeccccc-eeEEEecCCCEEEEEECCCCCCceEEEEECCCCCC--------------eEEeccC
Q 003878 349 LLP----------FVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND--------------WFEVIPE 403 (789)
Q Consensus 349 ~~~----------~~~l~~~~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~--------------~~~l~~~ 403 (789)
... +......... ....|+ ++.++..+ .+..|..+|+.++.. ...+..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~----~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (366)
T 3k26_A 211 NRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKS----CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYS 284 (366)
T ss_dssp SSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEEC----SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECS
T ss_pred cccccceeeccCccccccCCcceEEEEEEc--CCEEEEEe----cCCEEEEEeCCCccccccccccCCcchheecccccc
Confidence 000 0000001011 112244 56555332 246788888766531 1111112
Q ss_pred CCCceeeeEEEecC--CEEEEEEEeCCeEEEEEEECCCCceee----ecccC--CeeEEEeecccCCcEEEEEEcCCCCC
Q 003878 404 AERDVLESATAVNL--NQMIVSYLSDVKYVLQIRDLKNGSLLH----QLPIE--IGSVNAISARREDSVVFISFTSFLIP 475 (789)
Q Consensus 404 ~~~~~i~~v~~~~~--~~lv~~~~~~g~~~L~~~dl~tG~~~~----~l~~~--~~~v~~~s~s~d~~~l~~~~ss~~~P 475 (789)
. ..+..+.++++ +.++++...++ .|++||+.+++... .+..+ ...+..+.++++++.++... .-
T Consensus 285 ~--~~v~~~~~s~~~~~~~l~~~~~dg--~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~----~d 356 (366)
T 3k26_A 285 Q--CDIWYMRFSMDFWQKMLALGNQVG--KLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVC----DD 356 (366)
T ss_dssp S--CCSSCCCCEECTTSSEEEEECTTS--CEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEE----TT
T ss_pred C--CcEEEEEEcCCCCCcEEEEEecCC--cEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCeEEEEe----CC
Confidence 1 23455666665 67777777776 78999998775422 34433 46788899999998766432 34
Q ss_pred cEEEEEECC
Q 003878 476 GIVYQCNLK 484 (789)
Q Consensus 476 ~~ly~~dl~ 484 (789)
+.++.||+.
T Consensus 357 g~i~iwd~~ 365 (366)
T 3k26_A 357 ASIWRWDRL 365 (366)
T ss_dssp SEEEEEEC-
T ss_pred CEEEEEEec
Confidence 688888864
No 311
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=98.96 E-value=4.6e-09 Score=108.27 Aligned_cols=154 Identities=19% Similarity=0.079 Sum_probs=97.5
Q ss_pred HHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCC-----ceeEEEecCCcccccccccccCCccchhhcCC
Q 003878 599 FDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPD-----LFGCALAHVGVMDMLRYHKFTIGHAWVSDFGC 673 (789)
Q Consensus 599 ~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd-----~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~ 673 (789)
.+|+.++++.|.++. .-+++.++|||+||+++..++.++|+ +++++|+..+..+........ ..+ ...+.
T Consensus 77 a~~l~~~i~~l~~~~--~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p~~g~~~~~~~--~~~-~~~~~ 151 (254)
T 3ds8_A 77 SKWLKIAMEDLKSRY--GFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSPFNDLDPNDNG--MDL-SFKKL 151 (254)
T ss_dssp HHHHHHHHHHHHHHH--CCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCCTTCSCHHHHC--SCT-TCSSC
T ss_pred HHHHHHHHHHHHHHh--CCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCCcCcccccccc--ccc-ccccC
Confidence 355666667777652 22689999999999999999999998 899999988866654322111 001 11233
Q ss_pred CCcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecC------CCCCCCcHHHHHHHHHHHHhhccCCCCCCCCC
Q 003878 674 SEEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD------HDDRVVPLHSLKLLATMQYVLCTSLENSPQTN 747 (789)
Q Consensus 674 p~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~------~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~ 747 (789)
|.....+..+... ...+. ...|+|.++|. +|..||+..+..+...+... ..
T Consensus 152 p~~~~~~~~~~~~--~~~~~-----------~~~~vl~I~G~~~~~~~~Dg~Vp~~ss~~l~~~~~~~----------~~ 208 (254)
T 3ds8_A 152 PNSTPQMDYFIKN--QTEVS-----------PDLEVLAIAGELSEDNPTDGIVPTISSLATRLFMPGS----------AK 208 (254)
T ss_dssp SSCCHHHHHHHHT--GGGSC-----------TTCEEEEEEEESBTTBCBCSSSBHHHHTGGGGTSBTT----------BS
T ss_pred CcchHHHHHHHHH--HhhCC-----------CCcEEEEEEecCCCCCCCCcEeeHHHHHHHHHHhhcc----------Cc
Confidence 4322233333221 11111 14799999999 99999999988776666543 23
Q ss_pred cEEEEEeCC--CCcCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 748 PIIGRIERK--AGHGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 748 ~~~l~~~~~--~gH~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
.....++.+ ++|....... +..+.+..||.+..
T Consensus 209 ~~~~~~~~g~~a~Hs~l~~~~---~v~~~i~~fL~~~~ 243 (254)
T 3ds8_A 209 AYIEDIQVGEDAVHQTLHETP---KSIEKTYWFLEKFK 243 (254)
T ss_dssp EEEEEEEESGGGCGGGGGGSH---HHHHHHHHHHHTCC
T ss_pred ceEEEEEeCCCCchhcccCCH---HHHHHHHHHHHHhc
Confidence 344455555 6787654322 45667788887654
No 312
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.95 E-value=1.2e-07 Score=103.21 Aligned_cols=298 Identities=8% Similarity=-0.016 Sum_probs=162.2
Q ss_pred EEEEeEEeCC-CCcEEEEEEecCCceEEEEEEEEcCCCceecccc-cccccc----cccCccceeeeeeccccccccccc
Q 003878 132 AALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIVEADAL-SWVCFC----FSHSFGYFFHLTISLLNVPTYKLF 205 (789)
Q Consensus 132 ~~~~~~~~Sp-Dg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~~~~p~~~~~ 205 (789)
..+..+++|| ||++||.+.. ...|++||+.++....... ...... ...+.+. ..+..+.|++.
T Consensus 44 ~~v~~~~~s~~~~~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----v~~~~~~~~~~-- 112 (408)
T 4a11_B 44 GGINTLDIEPVEGRYMLSGGS-----DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYS----VETVQWYPHDT-- 112 (408)
T ss_dssp SCEEEEEECTTTCCEEEEEET-----TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSC----EEEEEECTTCT--
T ss_pred CcEEEEEEecCCCCEEEEEcC-----CCeEEEEECCCCcccceEeccccccccccccccCCCc----EEEEEEccCCC--
Confidence 4578899999 9999986543 3369999999885432110 000000 0000000 11112223111
Q ss_pred cccccceeeEEEeeeccccceeeeeeec---------ccccceEEEEeCCc---EEEEEEccCCCCCCCCCCCccccCCc
Q 003878 206 LYLRGIFFFFYLFSLVKSTIYSFWSVVS---------QFKFSSIAWTHDSK---GFFYSRYPAPKEGKDMDAGTETDSNL 273 (789)
Q Consensus 206 ~~~~~~~~~~~~~~s~~~g~~~l~~~~~---------~~~~~~~~wspDg~---~i~y~~~~~~~~~~~~~~~~~~~~~~ 273 (789)
.+++++..+|...+|.+.. ......+.|+|++. .|+....
T Consensus 113 ---------~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------- 164 (408)
T 4a11_B 113 ---------GMFTSSSFDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTR------------------- 164 (408)
T ss_dssp ---------TCEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEES-------------------
T ss_pred ---------cEEEEEeCCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcC-------------------
Confidence 3577788899999998754 12235677887543 5555432
Q ss_pred ccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccC--CCCc
Q 003878 274 YHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD--GLLP 351 (789)
Q Consensus 274 ~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~--~~~~ 351 (789)
...|+++++.+... ...+.. +...+..+.|+|+++++++.... ...|.++|+.++......+.... ....
T Consensus 165 ~~~v~~~d~~~~~~--~~~~~~--~~~~v~~~~~~~~~~~ll~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~ 236 (408)
T 4a11_B 165 GPKVQLCDLKSGSC--SHILQG--HRQEILAVSWSPRYDYILATASA----DSRVKLWDVRRASGCLITLDQHNGKKSQA 236 (408)
T ss_dssp SSSEEEEESSSSCC--CEEECC--CCSCEEEEEECSSCTTEEEEEET----TSCEEEEETTCSSCCSEECCTTTTCSCCC
T ss_pred CCeEEEEeCCCcce--eeeecC--CCCcEEEEEECCCCCcEEEEEcC----CCcEEEEECCCCCccccccccccccccee
Confidence 23488888876533 223332 33446789999999986655543 24488899876421100000000 0000
Q ss_pred cEe-eeccccc-eeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccC----CCCceeeeEEEecCCEEEEEEE
Q 003878 352 FVK-LIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPE----AERDVLESATAVNLNQMIVSYL 425 (789)
Q Consensus 352 ~~~-l~~~~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~----~~~~~i~~v~~~~~~~lv~~~~ 425 (789)
... ....... ....|+|+|+.|+..+. ++.|..+|+.+++........ ........+.......+++ ..
T Consensus 237 ~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 311 (408)
T 4a11_B 237 VESANTAHNGKVNGLCFTSDGLHLLTVGT----DNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVF-VP 311 (408)
T ss_dssp TTTSSCSCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEE-EE
T ss_pred eccccccccCceeEEEEcCCCCEEEEecC----CCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEE-Ee
Confidence 000 0111111 12348999998886553 356899999876521111111 1001111111122234444 44
Q ss_pred eCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 426 SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 426 ~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
.++ .|.+||+.+++.+..+..+.+.+..+.+++++..++... .-+.+..||+.+++
T Consensus 312 ~~~--~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~----~dg~i~iw~~~~~~ 367 (408)
T 4a11_B 312 YGS--TIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGS----RDCNILAWVPSLYE 367 (408)
T ss_dssp ETT--EEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEE----TTSCEEEEEECC--
T ss_pred cCC--EEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEEC----CCCeEEEEeCCCCC
Confidence 454 799999998887777766677788899999998766432 24688999998774
No 313
>2ha2_A ACHE, acetylcholinesterase; hydrolase fold, serine esterase, homod glycosylated protein, hydrolase; HET: NAG FUC SCK SCU P6G; 2.05A {Mus musculus} SCOP: c.69.1.1 PDB: 1j07_A* 1mah_A* 1j06_A* 1n5r_A* 2gyv_A* 2gyw_A* 2h9y_A* 2ha0_A* 2gyu_A* 2ha3_A* 2wls_A* 4a23_A* 2c0q_A* 2jey_A* 2jgm_A* 2whr_A* 2c0p_A* 1ku6_A* 1q84_A* 1q83_A* ...
Probab=98.94 E-value=6.1e-10 Score=127.61 Aligned_cols=131 Identities=22% Similarity=0.154 Sum_probs=90.1
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCC---CCCHHHHHHHHcCCeEEEEEeecCC-CCCChhHHhcc
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP---SFSVSRTILMRHLGAVFCIANIRGG-GEYGEEWHKGG 590 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~---~~~~~~~~~l~~~G~~v~~~~~RG~-g~~g~~~~~~~ 590 (789)
+.|. ..+ .++.|+.. ..++.|+||++|||....... .+.. ..++.+.|++|+.+|||.+ -+|+... ..
T Consensus 93 ~edc-l~l--~v~~P~~~-~~~~~Pviv~iHGGg~~~g~~~~~~~~~--~~la~~~g~vvv~~nYRlg~~Gf~~~~--~~ 164 (543)
T 2ha2_A 93 SEDC-LYL--NVWTPYPR-PASPTPVLIWIYGGGFYSGAASLDVYDG--RFLAQVEGAVLVSMNYRVGTFGFLALP--GS 164 (543)
T ss_dssp ESCC-CEE--EEEEESSC-CSSCEEEEEEECCSTTTCCCTTSGGGCT--HHHHHHHCCEEEEECCCCHHHHHCCCT--TC
T ss_pred CCcC-CeE--EEeecCCC-CCCCCeEEEEECCCccccCCCCCCcCCh--HHHHhcCCEEEEEecccccccccccCC--CC
Confidence 5677 555 55577652 346789999999986433332 3333 2344447999999999954 1222110 00
Q ss_pred cccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC--CCceeEEEecCCcc
Q 003878 591 ALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVM 653 (789)
Q Consensus 591 ~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~--pd~f~a~v~~~p~~ 653 (789)
........+.|.+++++|+.++- ..||+||.|+|+|+||.+++.++... +.+|+++|+++|..
T Consensus 165 ~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~i~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 232 (543)
T 2ha2_A 165 REAPGNVGLLDQRLALQWVQENIAAFGGDPMSVTLFGESAGAASVGMHILSLPSRSLFHRAVLQSGTP 232 (543)
T ss_dssp SSCCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHSHHHHTTCSEEEEESCCS
T ss_pred CCCCCcccHHHHHHHHHHHHHHHHHhCCChhheEEEeechHHHHHHHHHhCcccHHhHhhheeccCCc
Confidence 11223446899999999998762 26999999999999999998887653 46999999999864
No 314
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.94 E-value=2.2e-07 Score=97.22 Aligned_cols=264 Identities=13% Similarity=0.058 Sum_probs=160.0
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
..+..+.+ |||++|+.+. ....|++||+.++..... +... .+. ..+..+.|++
T Consensus 19 ~~v~~~~~-~~~~~l~s~~-----~dg~v~vw~~~~~~~~~~-~~~~-------~~~----v~~~~~~~~~--------- 71 (313)
T 3odt_A 19 QDVRDVVA-VDDSKVASVS-----RDGTVRLWSKDDQWLGTV-VYTG-------QGF----LNSVCYDSEK--------- 71 (313)
T ss_dssp SCEEEEEE-EETTEEEEEE-----TTSEEEEEEESSSEEEEE-EEEC-------SSC----EEEEEEETTT---------
T ss_pred CCcEEEEe-cCCCEEEEEE-----cCCcEEEEECCCCEEEEE-eecC-------Ccc----EEEEEECCCC---------
Confidence 34677888 9999988543 234899999988854421 1110 011 1112233455
Q ss_pred eeeEEEeeeccccceeeeeeec-------------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEE
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVS-------------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFY 278 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~-------------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 278 (789)
.+++++..+|...+|.+.. ......+.| +++.|+.... ...|.
T Consensus 72 ---~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~~~l~~~~~-------------------d~~i~ 127 (313)
T 3odt_A 72 ---ELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QDGVVISGSW-------------------DKTAK 127 (313)
T ss_dssp ---TEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ETTEEEEEET-------------------TSEEE
T ss_pred ---CEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cCCEEEEEeC-------------------CCCEE
Confidence 3677788888888887543 111234566 6677665533 23577
Q ss_pred EEECCCCCCCcEEEEecCCCCeeEEEEEEec-CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec
Q 003878 279 YHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID 357 (789)
Q Consensus 279 ~~~lg~~~~~~~~~~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~ 357 (789)
+++.+ +....+... ...+..+.++| ++++++....+ ..+.++|.... ...+..
T Consensus 128 ~~d~~----~~~~~~~~~--~~~v~~~~~~~~~~~~l~~~~~d-----~~i~i~d~~~~---------------~~~~~~ 181 (313)
T 3odt_A 128 VWKEG----SLVYNLQAH--NASVWDAKVVSFSENKFLTASAD-----KTIKLWQNDKV---------------IKTFSG 181 (313)
T ss_dssp EEETT----EEEEEEECC--SSCEEEEEEEETTTTEEEEEETT-----SCEEEEETTEE---------------EEEECS
T ss_pred EEcCC----cEEEecccC--CCceeEEEEccCCCCEEEEEECC-----CCEEEEecCce---------------EEEEec
Confidence 77721 222333332 33355778888 89988766533 34777884321 111111
Q ss_pred -ccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEE
Q 003878 358 -GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIR 435 (789)
Q Consensus 358 -~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~ 435 (789)
... .....|++++. ++..+ .++.|..+|+.+++....+..+. ..+..+.+++++ .+++...++ .|++|
T Consensus 182 ~~~~~i~~~~~~~~~~-~~~~~----~dg~i~i~d~~~~~~~~~~~~~~--~~i~~~~~~~~~-~l~~~~~dg--~v~iw 251 (313)
T 3odt_A 182 IHNDVVRHLAVVDDGH-FISCS----NDGLIKLVDMHTGDVLRTYEGHE--SFVYCIKLLPNG-DIVSCGEDR--TVRIW 251 (313)
T ss_dssp SCSSCEEEEEEEETTE-EEEEE----TTSEEEEEETTTCCEEEEEECCS--SCEEEEEECTTS-CEEEEETTS--EEEEE
T ss_pred cCcccEEEEEEcCCCe-EEEcc----CCCeEEEEECCchhhhhhhhcCC--ceEEEEEEecCC-CEEEEecCC--EEEEE
Confidence 111 12234788877 44333 24679999998876333443333 567889999855 456666676 79999
Q ss_pred ECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 436 DLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 436 dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
|+.+++....+..+...+..+.+++++. ++ +.+ .-+.++.||+.+++
T Consensus 252 d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~-~~~---~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 252 SKENGSLKQVITLPAISIWSVDCMSNGD-II-VGS---SDNLVRIFSQEKSR 298 (313)
T ss_dssp CTTTCCEEEEEECSSSCEEEEEECTTSC-EE-EEE---TTSCEEEEESCGGG
T ss_pred ECCCCceeEEEeccCceEEEEEEccCCC-EE-EEe---CCCcEEEEeCCCCc
Confidence 9998887677776666788889999988 33 222 34689999988764
No 315
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.94 E-value=4.1e-07 Score=95.72 Aligned_cols=232 Identities=11% Similarity=0.056 Sum_probs=141.6
Q ss_pred EeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceee
Q 003878 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFF 214 (789)
Q Consensus 135 ~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 214 (789)
.++.|+|+++.|.++-...+ +|+.+|.++++........
T Consensus 16 Egp~w~~~~~~l~~~d~~~~----~i~~~d~~~~~~~~~~~~~------------------------------------- 54 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDIPAK----KVCRWDSFTKQVQRVTMDA------------------------------------- 54 (297)
T ss_dssp EEEEEETTTTEEEEEETTTT----EEEEEETTTCCEEEEECSS-------------------------------------
T ss_pred cCCeEECCCCEEEEEECCCC----EEEEEECCCCcEEEEeCCC-------------------------------------
Confidence 47889998888876543333 6999999988543211111
Q ss_pred EEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEe
Q 003878 215 FYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWK 294 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~ 294 (789)
....++|+|||+ |++.. ...|++++..++..+ .+..
T Consensus 55 ---------------------~~~~i~~~~dG~-l~v~~--------------------~~~l~~~d~~~g~~~--~~~~ 90 (297)
T 3g4e_A 55 ---------------------PVSSVALRQSGG-YVATI--------------------GTKFCALNWKEQSAV--VLAT 90 (297)
T ss_dssp ---------------------CEEEEEEBTTSS-EEEEE--------------------TTEEEEEETTTTEEE--EEEE
T ss_pred ---------------------ceEEEEECCCCC-EEEEE--------------------CCeEEEEECCCCcEE--EEEe
Confidence 146889999998 55442 125888887654321 2222
Q ss_pred cC-C-CCeeEEEEEEecCCcEEEEEEEcCC-------CCceEEEEEECCCCCCCcccccccCCCCccEeeeccccc-eeE
Q 003878 295 DP-E-HPKYIFSGHVTEDGQYLVMCIEENC-------DPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-QYE 364 (789)
Q Consensus 295 ~~-~-~~~~~~~~~~SpDG~~l~~~~~~~~-------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-~~~ 364 (789)
.. . .......+.++|||+ +++...... .....||.++.++. ...+...... .-.
T Consensus 91 ~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---------------~~~~~~~~~~pngi 154 (297)
T 3g4e_A 91 VDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH---------------VKKYFDQVDISNGL 154 (297)
T ss_dssp CCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC---------------EEEEEEEESBEEEE
T ss_pred cCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC---------------EEEEeeccccccce
Confidence 21 1 123355788999999 444443211 12457888876531 1122222111 223
Q ss_pred EEecCCCEEEEEECCCCCCceEEEEEC--CCCC--CeEEeccCC-CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCC
Q 003878 365 VIANDDTVFTFLTNKDAPKYKIIRVDL--KEPN--DWFEVIPEA-ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKN 439 (789)
Q Consensus 365 ~~s~dG~~l~~~tn~~~~~~~L~~~dl--~~~~--~~~~l~~~~-~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~t 439 (789)
.|+|||+.+|+.... ..+|+++++ +++. ..+.+..-. ......++.+.+++.+++....++ +|+++++++
T Consensus 155 ~~spdg~~lyv~~~~---~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~--~v~~~d~~t 229 (297)
T 3g4e_A 155 DWSLDHKIFYYIDSL---SYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGG--RVIRLDPVT 229 (297)
T ss_dssp EECTTSCEEEEEEGG---GTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTT--EEEEECTTT
T ss_pred EEcCCCCEEEEecCC---CCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCC--EEEEEcCCC
Confidence 489999999876543 367888886 3443 011222111 123457788887677887766554 699999988
Q ss_pred CceeeecccCCeeEEEeecc-cCCcEEEEEEcCC
Q 003878 440 GSLLHQLPIEIGSVNAISAR-REDSVVFISFTSF 472 (789)
Q Consensus 440 G~~~~~l~~~~~~v~~~s~s-~d~~~l~~~~ss~ 472 (789)
|+....+..|...+..+.+. ++++.|+++..+.
T Consensus 230 G~~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~ 263 (297)
T 3g4e_A 230 GKRLQTVKLPVDKTTSCCFGGKNYSEMYVTCARD 263 (297)
T ss_dssp CCEEEEEECSSSBEEEEEEESGGGCEEEEEEBCT
T ss_pred ceEEEEEECCCCCceEEEEeCCCCCEEEEEcCCc
Confidence 98777887775556677777 7889999887654
No 316
>1p0i_A Cholinesterase; serine hydrolase, butyrate, hydrolase; HET: NAG FUC MES; 2.00A {Homo sapiens} SCOP: c.69.1.1 PDB: 1p0m_A* 1p0p_A* 1p0q_A* 1xlu_A* 1xlv_A* 1xlw_A* 2wsl_A* 2pm8_A* 3djy_A* 3dkk_A* 2wij_A* 2wif_A* 2wik_A* 2y1k_A* 2j4c_A* 2xmb_A* 2xmc_A* 2xmd_A* 2xmg_A* 2wig_A* ...
Probab=98.94 E-value=7.7e-10 Score=126.44 Aligned_cols=221 Identities=17% Similarity=0.110 Sum_probs=127.8
Q ss_pred cCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCC---CCCCHHHHHHHHcCCeEEEEEeecCCC-CCChhHHhcc
Q 003878 515 SKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVT---PSFSVSRTILMRHLGAVFCIANIRGGG-EYGEEWHKGG 590 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~g~~~~~~~ 590 (789)
+.|. . .+-++.|+.. .++.|+||++|||...... ..+.. ..+..+.|++|+.+|||.+. +|+... ..
T Consensus 89 ~edc-l--~lnv~~P~~~--~~~~Pv~v~iHGGg~~~g~~~~~~~~~--~~la~~~~~vvv~~nYRlg~~Gf~~~~--~~ 159 (529)
T 1p0i_A 89 SEDC-L--YLNVWIPAPK--PKNATVLIWIYGGGFQTGTSSLHVYDG--KFLARVERVIVVSMNYRVGALGFLALP--GN 159 (529)
T ss_dssp CSCC-C--EEEEEEESSC--CSSEEEEEEECCSTTTSCCTTCGGGCT--HHHHHHHCCEEEEECCCCHHHHHCCCT--TC
T ss_pred CCcC-C--eEEEeeCCCC--CCCCeEEEEECCCccccCCCCccccCh--HHHhccCCeEEEEecccccccccccCC--CC
Confidence 5566 4 4456678753 2678999999998533322 22443 23444479999999999541 111100 00
Q ss_pred cccCCcchHHHHHHHHHHHHHc---CCCCCCcEEEEeeChHHHHHHHHHHhC--CCceeEEEecCCcccccccccc----
Q 003878 591 ALAKKQNCFDDFISASEYLISA---GYTQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVMDMLRYHKF---- 661 (789)
Q Consensus 591 ~~~~~~~~~~D~~~~~~~L~~~---~~~d~~~i~i~G~S~GG~l~~~~~~~~--pd~f~a~v~~~p~~d~~~~~~~---- 661 (789)
........+.|.+++++|+.++ -..||+||.|+|+|+||.+++.++... +.+|+++|+++|..........
T Consensus 160 ~~~~~n~gl~D~~~al~wv~~~i~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~lf~~~i~~Sg~~~~~~~~~~~~~~ 239 (529)
T 1p0i_A 160 PEAPGNMGLFDQQLALQWVQKNIAAFGGNPKSVTLFGESAGAASVSLHLLSPGSHSLFTRAILQSGSFNAPWAVTSLYEA 239 (529)
T ss_dssp TTSCSCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGGGGCSEEEEESCCTTSTTSCCCHHHH
T ss_pred CCCcCcccHHHHHHHHHHHHHHHHHhCCChhheEEeeccccHHHHHHHHhCccchHHHHHHHHhcCcccCcccccChHHH
Confidence 0122334589999999999876 236999999999999999999888763 4599999999997643211110
Q ss_pred -cCCccchhhcCCC--CcHHHHHHHHhcCcccCCCCCC--CC-CCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHh
Q 003878 662 -TIGHAWVSDFGCS--EEEEEFYWLIKYSPLHNVRRPW--EQ-NPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYV 735 (789)
Q Consensus 662 -~~~~~~~~e~g~p--~~~~~~~~l~~~sP~~~v~~~~--~~-~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~ 735 (789)
..........|++ ...+..+.|++.++-..+.... .. .........|++ |..+-+.++.++.+.-+
T Consensus 240 ~~~~~~~a~~lgc~~~~~~~~~~cLr~~~~~~l~~a~~~~~~~~~~~~~~f~Pvv------Dg~~l~~~p~~~~~~g~-- 311 (529)
T 1p0i_A 240 RNRTLNLAKLTGCSRENETEIIKCLRNKDPQEILLNEAFVVPYGTPLSVNFGPTV------DGDFLTDMPDILLELGQ-- 311 (529)
T ss_dssp HHHHHHHHHHTTCCCSSHHHHHHHHTTSCHHHHHHHHGGGSSSCCTTCCSSCCCC------CSSSCCSCHHHHHHTTC--
T ss_pred HHHHHHHHHHcCcCCCChHHHHHHHhhCCHHHHHHHhhhhccccccccccceeec------CCccCCcCHHHHHhcCC--
Confidence 0001122345665 2234456666654322111000 00 000001233443 55555666655543322
Q ss_pred hccCCCCCCCCCcEEEEEeCCCCcC
Q 003878 736 LCTSLENSPQTNPIIGRIERKAGHG 760 (789)
Q Consensus 736 ~~~~~~~~~~~~~~~l~~~~~~gH~ 760 (789)
..++|+.+-...++|..
T Consensus 312 --------~~~vp~liG~~~~Eg~~ 328 (529)
T 1p0i_A 312 --------FKKTQILVGVNKDEGTA 328 (529)
T ss_dssp --------SCCSCEEEEEETBTTHH
T ss_pred --------cCCcceEEEeecchHHH
Confidence 22789999999999864
No 317
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.93 E-value=5.8e-08 Score=103.37 Aligned_cols=244 Identities=9% Similarity=-0.046 Sum_probs=147.5
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCcee--cccccccccccccCccceeeeeeccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE--ADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLY 207 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 207 (789)
+.-.+..++|||||++|+.+.. ...|++||+.++... ...+... . +
T Consensus 10 h~~~v~~~~~s~~~~~l~~~~~-----d~~v~iw~~~~~~~~~~~~~~~~~------~-~-------------------- 57 (342)
T 1yfq_A 10 PKDYISDIKIIPSKSLLLITSW-----DGSLTVYKFDIQAKNVDLLQSLRY------K-H-------------------- 57 (342)
T ss_dssp CSSCEEEEEEEGGGTEEEEEET-----TSEEEEEEEETTTTEEEEEEEEEC------S-S--------------------
T ss_pred CCCcEEEEEEcCCCCEEEEEcC-----CCeEEEEEeCCCCccccceeeeec------C-C--------------------
Confidence 3345788999999999986532 247999999887511 0011111 0 0
Q ss_pred cccceeeEEEeeeccccceeeeeeecccccceEEEEeCCc-EEEEEEccCCCCCCCCCCCccccCCcccEEEEEEC-CCC
Q 003878 208 LRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSK-GFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFL-GTK 285 (789)
Q Consensus 208 ~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~-~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l-g~~ 285 (789)
....++|+||++ .|+....+ ..|++|++ .+.
T Consensus 58 ----------------------------~v~~~~~~~~~~~~l~~~~~d-------------------g~i~~wd~~~~~ 90 (342)
T 1yfq_A 58 ----------------------------PLLCCNFIDNTDLQIYVGTVQ-------------------GEILKVDLIGSP 90 (342)
T ss_dssp ----------------------------CEEEEEEEESSSEEEEEEETT-------------------SCEEEECSSSSS
T ss_pred ----------------------------ceEEEEECCCCCcEEEEEcCC-------------------CeEEEEEeccCC
Confidence 257899999999 88766432 24888888 654
Q ss_pred CCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCC---------CCCCcccccccCCCCccEeee
Q 003878 286 QSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA---------LPEGLEGFKKRDGLLPFVKLI 356 (789)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~---------g~~~~~~~~~~~~~~~~~~l~ 356 (789)
.. ..+....+...+..+.|+| ++.|+.... ...|.++|+.+ +. +...+.
T Consensus 91 ~~---~~~~~~~~~~~v~~l~~~~-~~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~~-------------~~~~~~ 148 (342)
T 1yfq_A 91 SF---QALTNNEANLGICRICKYG-DDKLIAASW-----DGLIEVIDPRNYGDGVIAVKNL-------------NSNNTK 148 (342)
T ss_dssp SE---EECBSCCCCSCEEEEEEET-TTEEEEEET-----TSEEEEECHHHHTTBCEEEEES-------------CSSSSS
T ss_pred ce---EeccccCCCCceEEEEeCC-CCEEEEEcC-----CCeEEEEcccccccccccccCC-------------eeeEEe
Confidence 22 2333211344567899999 888876553 34588888764 21 000111
Q ss_pred ccccceeEEEecCCCEEEEEECCCCCCceEEEEECCC-CCC-eEEeccCCCCceeeeEEEec-CCEEEEEEEeCCeEEEE
Q 003878 357 DGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE-PND-WFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQ 433 (789)
Q Consensus 357 ~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~-~~~-~~~l~~~~~~~~i~~v~~~~-~~~lv~~~~~~g~~~L~ 433 (789)
.........|++++ ++..+. +..|..+|+.+ +.. ....... ....+..+.+++ ++.+++....++ .+.
T Consensus 149 ~~~~v~~~~~~~~~--l~~~~~----d~~i~i~d~~~~~~~~~~~~~~~-~~~~i~~i~~~~~~~~~l~~~~~dg--~i~ 219 (342)
T 1yfq_A 149 VKNKIFTMDTNSSR--LIVGMN----NSQVQWFRLPLCEDDNGTIEESG-LKYQIRDVALLPKEQEGYACSSIDG--RVA 219 (342)
T ss_dssp SCCCEEEEEECSSE--EEEEES----TTEEEEEESSCCTTCCCEEEECS-CSSCEEEEEECSGGGCEEEEEETTS--EEE
T ss_pred eCCceEEEEecCCc--EEEEeC----CCeEEEEECCccccccceeeecC-CCCceeEEEECCCCCCEEEEEecCC--cEE
Confidence 11111112366655 544332 35799999987 541 2222222 235678899987 777788888887 577
Q ss_pred EEECCCC------ceeeecccCC---------eeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 434 IRDLKNG------SLLHQLPIEI---------GSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 434 ~~dl~tG------~~~~~l~~~~---------~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+|+++.+ +....+.... +.+..+.++++++.++... .-+.++.||+.+++
T Consensus 220 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~----~dg~i~vwd~~~~~ 284 (342)
T 1yfq_A 220 VEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAG----SDGIISCWNLQTRK 284 (342)
T ss_dssp EEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEE----TTSCEEEEETTTTE
T ss_pred EEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEec----CCceEEEEcCccHh
Confidence 7777654 3323333322 2677889999988665433 24689999998884
No 318
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=98.92 E-value=8.7e-08 Score=101.51 Aligned_cols=201 Identities=12% Similarity=-0.010 Sum_probs=117.2
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCC---eeEEEEEEecCCcEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHP---KYIFSGHVTEDGQYL 314 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~---~~~~~~~~SpDG~~l 314 (789)
..++|+|||+.++++... ...|+++++.+..... .+...... .....+.+||||++|
T Consensus 37 ~~~~~s~dg~~l~v~~~~------------------~~~v~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~~~s~dg~~l 96 (337)
T 1pby_B 37 MVPMVAPGGRIAYATVNK------------------SESLVKIDLVTGETLG--RIDLSTPEERVKSLFGAALSPDGKTL 96 (337)
T ss_dssp CCEEECTTSSEEEEEETT------------------TTEEEEEETTTCCEEE--EEECCBTTEEEECTTCEEECTTSSEE
T ss_pred cceEEcCCCCEEEEEeCC------------------CCeEEEEECCCCCeEe--eEEcCCcccccccccceEECCCCCEE
Confidence 679999999999887432 2468888887654222 22221100 011257899999999
Q ss_pred EEEEEcC-----CC--CceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEE
Q 003878 315 VMCIEEN-----CD--PVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKII 387 (789)
Q Consensus 315 ~~~~~~~-----~~--~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~ 387 (789)
++..... .. ....|+++|++++. ....+..+.......|+|||+.|++. +..|+
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~-------------~~~~~~~~~~~~~~~~s~dg~~l~~~------~~~i~ 157 (337)
T 1pby_B 97 AIYESPVRLELTHFEVQPTRVALYDAETLS-------------RRKAFEAPRQITMLAWARDGSKLYGL------GRDLH 157 (337)
T ss_dssp EEEEEEEEECSSCEEECCCEEEEEETTTTE-------------EEEEEECCSSCCCEEECTTSSCEEEE------SSSEE
T ss_pred EEEecccccccccccccCceEEEEECCCCc-------------EEEEEeCCCCcceeEECCCCCEEEEe------CCeEE
Confidence 8875210 00 13679999998742 11122212222234589999988876 24699
Q ss_pred EEECCCCCCeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCe---------------------EEEEEEECCCCceeee
Q 003878 388 RVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVK---------------------YVLQIRDLKNGSLLHQ 445 (789)
Q Consensus 388 ~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~---------------------~~L~~~dl~tG~~~~~ 445 (789)
.+|+++++ ....++...... .+.+++++ .+++....++. ..|+++|+++++.. .
T Consensus 158 ~~d~~~~~-~~~~~~~~~~~~--~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~-~ 233 (337)
T 1pby_B 158 VMDPEAGT-LVEDKPIQSWEA--ETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA-M 233 (337)
T ss_dssp EEETTTTE-EEEEECSTTTTT--TTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE-E
T ss_pred EEECCCCc-EeeeeeccccCC--CceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce-E
Confidence 99998775 222233221000 11233322 23222111111 16899999987763 4
Q ss_pred cccC--CeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 446 LPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 446 l~~~--~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+... ...+..+.+++|++.+++. -..++.||+.+++
T Consensus 234 ~~~~~~~~~~~~~~~s~dg~~l~~~------~~~v~~~d~~~~~ 271 (337)
T 1pby_B 234 REVRIMDVFYFSTAVNPAKTRAFGA------YNVLESFDLEKNA 271 (337)
T ss_dssp EEEEECSSCEEEEEECTTSSEEEEE------ESEEEEEETTTTE
T ss_pred eecCCCCCceeeEEECCCCCEEEEe------CCeEEEEECCCCc
Confidence 4332 2345568899999988876 2799999998884
No 319
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=98.91 E-value=4.4e-07 Score=99.56 Aligned_cols=205 Identities=11% Similarity=0.029 Sum_probs=126.7
Q ss_pred cceEEEEe-CCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC-----CcEEEEecCCCCeeEEEEEEecC
Q 003878 237 FSSIAWTH-DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS-----EDILCWKDPEHPKYIFSGHVTED 310 (789)
Q Consensus 237 ~~~~~wsp-Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~-----~~~~~~~~~~~~~~~~~~~~SpD 310 (789)
...++|+| |++.|+....+ ..|.+|++.+... +....+... ...+..+.|+|+
T Consensus 84 V~~~~~~p~~~~~l~s~s~d-------------------g~v~vw~~~~~~~~~~~~~~~~~~~~h--~~~v~~~~~~p~ 142 (402)
T 2aq5_A 84 VLDIAWCPHNDNVIASGSED-------------------CTVMVWEIPDGGLVLPLREPVITLEGH--TKRVGIVAWHPT 142 (402)
T ss_dssp EEEEEECTTCTTEEEEEETT-------------------SEEEEEECCTTCCSSCBCSCSEEEECC--SSCEEEEEECSS
T ss_pred EEEEEeCCCCCCEEEEEeCC-------------------CeEEEEEccCCCCccccCCceEEecCC--CCeEEEEEECcC
Confidence 57899999 88877765432 3588888876532 223333332 344678999999
Q ss_pred CcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEee--eccccce-eEEEecCCCEEEEEECCCCCCceEE
Q 003878 311 GQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL--IDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKII 387 (789)
Q Consensus 311 G~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l--~~~~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~ 387 (789)
|+.++++... ...|.++|+.++. ....+ ....... ...|+|+|+.|+..+. ++.|.
T Consensus 143 ~~~~l~s~~~----dg~i~iwd~~~~~-------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----d~~i~ 201 (402)
T 2aq5_A 143 AQNVLLSAGC----DNVILVWDVGTGA-------------AVLTLGPDVHPDTIYSVDWSRDGALICTSCR----DKRVR 201 (402)
T ss_dssp BTTEEEEEET----TSCEEEEETTTTE-------------EEEEECTTTCCSCEEEEEECTTSSCEEEEET----TSEEE
T ss_pred CCCEEEEEcC----CCEEEEEECCCCC-------------ccEEEecCCCCCceEEEEECCCCCEEEEEec----CCcEE
Confidence 9544444432 2448899998742 12222 1111112 2348999988876543 36899
Q ss_pred EEECCCCCCeEEe-ccCCCCceeeeEEEecCCEEEEEEEe-CCeEEEEEEECCCCce-eeecccC-CeeEEEeecccCCc
Q 003878 388 RVDLKEPNDWFEV-IPEAERDVLESATAVNLNQMIVSYLS-DVKYVLQIRDLKNGSL-LHQLPIE-IGSVNAISARREDS 463 (789)
Q Consensus 388 ~~dl~~~~~~~~l-~~~~~~~~i~~v~~~~~~~lv~~~~~-~g~~~L~~~dl~tG~~-~~~l~~~-~~~v~~~s~s~d~~ 463 (789)
.+|+.+++....+ ..+. ...+..+.+++++.+++.... .....|.+||+.+++. ......+ ...+..+.++++++
T Consensus 202 iwd~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 280 (402)
T 2aq5_A 202 VIEPRKGTVVAEKDRPHE-GTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTN 280 (402)
T ss_dssp EEETTTTEEEEEEECSSC-SSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTT
T ss_pred EEeCCCCceeeeeccCCC-CCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCC
Confidence 9999887633333 2333 233667888887777776621 1234899999986653 2222222 34466778899999
Q ss_pred EEEEEEcCCCCCcEEEEEECCCCC
Q 003878 464 VVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 464 ~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
.++++.+ .-+.++.||+.+++
T Consensus 281 ~l~~~g~---~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 281 IVYLCGK---GDSSIRYFEITSEA 301 (402)
T ss_dssp EEEEEET---TCSCEEEEEECSST
T ss_pred EEEEEEc---CCCeEEEEEecCCC
Confidence 8776543 24588899988775
No 320
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=98.91 E-value=1.6e-07 Score=100.62 Aligned_cols=166 Identities=11% Similarity=0.023 Sum_probs=87.4
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC-CcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS-EDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
..++|+|||+ ++++.. ...+|+++++..... .....+..+. ......++|||||++|++
T Consensus 144 ~~~~~spdg~-l~v~~~------------------~~~~v~~~~~~~~g~~~~~~~~~~~~-g~~p~~~~~spdg~~l~v 203 (347)
T 3hfq_A 144 HYTDLTPDNR-LAVIDL------------------GSDKVYVYNVSDAGQLSEQSVLTMEA-GFGPRHLVFSPDGQYAFL 203 (347)
T ss_dssp EEEEECTTSC-EEEEET------------------TTTEEEEEEECTTSCEEEEEEEECCT-TCCEEEEEECTTSSEEEE
T ss_pred eEEEECCCCc-EEEEeC------------------CCCEEEEEEECCCCcEEEeeeEEcCC-CCCCceEEECCCCCEEEE
Confidence 4689999999 665532 223688888863221 1111112221 112346899999999887
Q ss_pred EEEcCCCCceEEEEEECC--CCCCCcccccccCCCCccEeeec---c----ccceeEEEecCCCEEEEEECCCCCCceEE
Q 003878 317 CIEENCDPVNKVYYCDLS--ALPEGLEGFKKRDGLLPFVKLID---G----FDAQYEVIANDDTVFTFLTNKDAPKYKII 387 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~--~g~~~~~~~~~~~~~~~~~~l~~---~----~~~~~~~~s~dG~~l~~~tn~~~~~~~L~ 387 (789)
.... ...+++++++ ++. + .....+.. + .......|+|||++||+.... +..|.
T Consensus 204 ~~~~----~~~v~v~~~~~~~g~--~---------~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~---~~~v~ 265 (347)
T 3hfq_A 204 AGEL----SSQIASLKYDTQTGA--F---------TQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRG---YNTLA 265 (347)
T ss_dssp EETT----TTEEEEEEEETTTTE--E---------EEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEET---TTEEE
T ss_pred EeCC----CCEEEEEEecCCCCc--e---------EEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCC---CCEEE
Confidence 6532 2345555554 321 0 00111111 0 011224489999998876543 35677
Q ss_pred EEECCCCCCeEEe--ccCCCCceeeeEEEecCCE-EEEEEEeCCeEEEEEEECCCCce
Q 003878 388 RVDLKEPNDWFEV--IPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 388 ~~dl~~~~~~~~l--~~~~~~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl~tG~~ 442 (789)
+++++....++.+ ++.. ......++++++++ |++....++.-.++.+|.++|+.
T Consensus 266 v~~~~~~g~~~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 266 VFAVTADGHLTLIQQISTE-GDFPRDFDLDPTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp EEEECGGGCEEEEEEEECS-SSCCCEEEECTTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred EEEECCCCcEEEeEEEecC-CCCcCeEEECCCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 7777532112222 2221 23356788998655 55444444544555557777765
No 321
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A, alternative splicing, hydrolase, phosphoprotein, serine esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Probab=98.91 E-value=1.3e-08 Score=108.25 Aligned_cols=101 Identities=18% Similarity=0.142 Sum_probs=67.2
Q ss_pred CccEEEEEcCCCCccCCCCCCHHHHHHHHc-CCeEEEEEeecCCCCCChhHHhcccccCCcchH----HHHHHHHHHHHH
Q 003878 537 SHPCLLYGYGGFNISVTPSFSVSRTILMRH-LGAVFCIANIRGGGEYGEEWHKGGALAKKQNCF----DDFISASEYLIS 611 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~-~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~----~D~~~~~~~L~~ 611 (789)
..|.||++||+.+.. ..|.. ....|.+ .+|.|+++|.||.|..... .....++ +|+.+.++.|..
T Consensus 37 ~~p~lvllHG~~~~~--~~w~~-~~~~L~~~~~~~via~Dl~GhG~S~~~-------~~~~~~~~~~a~dl~~~l~~l~~ 106 (316)
T 3c5v_A 37 EGPVLLLLHGGGHSA--LSWAV-FTAAIISRVQCRIVALDLRSHGETKVK-------NPEDLSAETMAKDVGNVVEAMYG 106 (316)
T ss_dssp SSCEEEEECCTTCCG--GGGHH-HHHHHHTTBCCEEEEECCTTSTTCBCS-------CTTCCCHHHHHHHHHHHHHHHHT
T ss_pred CCcEEEEECCCCccc--ccHHH-HHHHHhhcCCeEEEEecCCCCCCCCCC-------CccccCHHHHHHHHHHHHHHHhc
Confidence 357899999976543 23443 3456662 2999999999998764211 1112234 455555555532
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHHh--CCCceeEEEecCC
Q 003878 612 AGYTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVG 651 (789)
Q Consensus 612 ~~~~d~~~i~i~G~S~GG~l~~~~~~~--~pd~f~a~v~~~p 651 (789)
+. ++++.++|||+||.+++.++.+ +|+ ++++|+..+
T Consensus 107 -~~--~~~~~lvGhSmGG~ia~~~A~~~~~p~-v~~lvl~~~ 144 (316)
T 3c5v_A 107 -DL--PPPIMLIGHSMGGAIAVHTASSNLVPS-LLGLCMIDV 144 (316)
T ss_dssp -TC--CCCEEEEEETHHHHHHHHHHHTTCCTT-EEEEEEESC
T ss_pred -cC--CCCeEEEEECHHHHHHHHHHhhccCCC-cceEEEEcc
Confidence 11 2689999999999999999985 577 788877654
No 322
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.90 E-value=7.9e-08 Score=102.77 Aligned_cols=203 Identities=11% Similarity=0.041 Sum_probs=108.6
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|+|||+.|+-...+ ..|++|++.........+.....+...+..+.|+|||++|+.
T Consensus 110 V~~v~~sp~g~~las~s~D-------------------~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s 170 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRD-------------------KSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLAS 170 (330)
T ss_dssp EEEEEECTTSCEEEEEETT-------------------SCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEE
T ss_pred EEEEEECCCCCEEEEEeCC-------------------CEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEE
Confidence 4689999999988866433 348888885432222222222233445678999999998876
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEecC--CCEEEEEECCCCCCceEEEEECCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIAND--DTVFTFLTNKDAPKYKIIRVDLKE 393 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~d--G~~l~~~tn~~~~~~~L~~~dl~~ 393 (789)
.+.+ ..|.++++.++. ..+...+........ ..|+|+ +..|+..+. +..|..+++.+
T Consensus 171 ~s~D-----~~i~iW~~~~~~-----------~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~----D~~v~iw~~~~ 230 (330)
T 2hes_X 171 SSYD-----DTVRIWKDYDDD-----------WECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSD----DSTVRVWKYMG 230 (330)
T ss_dssp EETT-----SCEEEEEEETTE-----------EEEEEEECCCSSCEEEEEECCSSSSCEEEEEET----TSCEEEEEEEE
T ss_pred EcCC-----CeEEEEECCCCC-----------eeEEEEccCCCCcEEEEEecCCCCeeEEEEEeC----CCeEEEEEecC
Confidence 6543 336666665421 011222222222222 337887 444543332 24466666543
Q ss_pred CC-----CeE--EeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCce--eeec-ccCCe-eEEEeeccc--
Q 003878 394 PN-----DWF--EVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL--LHQL-PIEIG-SVNAISARR-- 460 (789)
Q Consensus 394 ~~-----~~~--~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~--~~~l-~~~~~-~v~~~s~s~-- 460 (789)
+. .+. ..++......+..+++++ +.++++...++ .|++|+..+|+. .... ..... .+..+++++
T Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~-~~~l~s~~~dg--~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~ 307 (330)
T 2hes_X 231 DDEDDQQEWVCEAILPDVHKRQVYNVAWGF-NGLIASVGADG--VLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELN 307 (330)
T ss_dssp ECTTSCEEEEEEEECCSCCSSCEEEEEECT-TSCEEEEETTS--CEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC---
T ss_pred CCccccceeEEeeecccccccceEEEEEcC-CCEEEEEeCCC--EEEEEEcCCCceEEEeccccccccceEEEEEEecCC
Confidence 21 111 222321235678888887 55777777787 577788776642 1121 22233 677788887
Q ss_pred CCcEEEEEEcCCCCCcEEEEEECCC
Q 003878 461 EDSVVFISFTSFLIPGIVYQCNLKT 485 (789)
Q Consensus 461 d~~~l~~~~ss~~~P~~ly~~dl~t 485 (789)
++..| ++.+ .-+.+..||+.+
T Consensus 308 ~~~~l-as~s---~Dg~v~~W~~~~ 328 (330)
T 2hes_X 308 GKTIL-ATGG---DDGIVNFWSLEK 328 (330)
T ss_dssp --CCE-EEEE---TTSEEEEEEC--
T ss_pred CceEE-EEec---CCCcEEEEEecc
Confidence 45544 3332 235788887643
No 323
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=98.90 E-value=5.2e-07 Score=96.82 Aligned_cols=194 Identities=12% Similarity=0.024 Sum_probs=117.7
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|+||++.|+-... ...|++|++.++.. ...+.. +...+..++|+|||++|+.
T Consensus 79 V~~~~~~~~~~~l~s~s~-------------------D~~v~lwd~~~~~~--~~~~~~--h~~~v~~v~~sp~~~~l~s 135 (343)
T 2xzm_R 79 VSDLALSQENCFAISSSW-------------------DKTLRLWDLRTGTT--YKRFVG--HQSEVYSVAFSPDNRQILS 135 (343)
T ss_dssp EEEEEECSSTTEEEEEET-------------------TSEEEEEETTSSCE--EEEEEC--CCSCEEEEEECSSTTEEEE
T ss_pred eEEEEECCCCCEEEEEcC-------------------CCcEEEEECCCCcE--EEEEcC--CCCcEEEEEECCCCCEEEE
Confidence 467899999998875533 24688999876532 223333 2344678999999999986
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee---cccc-ceeEEEecCC----------CEEEEEECCCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI---DGFD-AQYEVIANDD----------TVFTFLTNKDAP 382 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~---~~~~-~~~~~~s~dG----------~~l~~~tn~~~~ 382 (789)
...+ ..|.++|+.... ..... .... .....|+|++ ..|+..+ .
T Consensus 136 ~~~d-----~~i~~wd~~~~~--------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~----~ 192 (343)
T 2xzm_R 136 AGAE-----REIKLWNILGEC--------------KFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVG----W 192 (343)
T ss_dssp EETT-----SCEEEEESSSCE--------------EEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEE----T
T ss_pred EcCC-----CEEEEEeccCCc--------------eeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEc----C
Confidence 5532 347888876421 00000 0001 1112366665 4444333 2
Q ss_pred CceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCc-eeeecccCCeeEEEeecccC
Q 003878 383 KYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGS-LLHQLPIEIGSVNAISARRE 461 (789)
Q Consensus 383 ~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~-~~~~l~~~~~~v~~~s~s~d 461 (789)
+..|..+|..... ...+..+. ..+..+++++++.++++...++ .|++||+.+.. ....+. ....+..++++|+
T Consensus 193 d~~i~iwd~~~~~-~~~~~~h~--~~v~~~~~s~~g~~l~sgs~dg--~v~iwd~~~~~~~~~~~~-~~~~v~~v~~sp~ 266 (343)
T 2xzm_R 193 DGRLKVWNTNFQI-RYTFKAHE--SNVNHLSISPNGKYIATGGKDK--KLLIWDILNLTYPQREFD-AGSTINQIAFNPK 266 (343)
T ss_dssp TSEEEEEETTTEE-EEEEECCS--SCEEEEEECTTSSEEEEEETTC--EEEEEESSCCSSCSEEEE-CSSCEEEEEECSS
T ss_pred CCEEEEEcCCCce-eEEEcCcc--ccceEEEECCCCCEEEEEcCCC--eEEEEECCCCcccceeec-CCCcEEEEEECCC
Confidence 4678888854321 22333333 5678899998777888888887 78999984332 222222 2344778889999
Q ss_pred CcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 462 DSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 462 ~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+..+.... -..+..||+.+++
T Consensus 267 ~~~la~~~-----d~~v~iw~~~~~~ 287 (343)
T 2xzm_R 267 LQWVAVGT-----DQGVKIFNLMTQS 287 (343)
T ss_dssp SCEEEEEE-----SSCEEEEESSSCC
T ss_pred CCEEEEEC-----CCCEEEEEeCCCC
Confidence 87655332 2468899987764
No 324
>3g02_A Epoxide hydrolase; alpha/beta hydrolase fold, enantioselective, mutant, directed evolution; 1.50A {Aspergillus niger} SCOP: c.69.1.11 PDB: 1qo7_A 3g0i_A*
Probab=98.90 E-value=2.2e-08 Score=110.55 Aligned_cols=121 Identities=14% Similarity=0.026 Sum_probs=84.9
Q ss_pred CCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHc------CCeEEEEEeecCCCCCChhHHhcc
Q 003878 517 DGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRH------LGAVFCIANIRGGGEYGEEWHKGG 590 (789)
Q Consensus 517 dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~------~G~~v~~~~~RG~g~~g~~~~~~~ 590 (789)
+| .+|++..+.++. +..|.||++||.++.... |... ...|.+ .||.|+++|.||.|.....
T Consensus 93 ~g-~~i~~~~~~~~~----~~~~pllllHG~~~s~~~--~~~~-~~~L~~~~~~~~~gf~vv~~DlpG~G~S~~~----- 159 (408)
T 3g02_A 93 EG-LTIHFAALFSER----EDAVPIALLHGWPGSFVE--FYPI-LQLFREEYTPETLPFHLVVPSLPGYTFSSGP----- 159 (408)
T ss_dssp TT-EEEEEEEECCSC----TTCEEEEEECCSSCCGGG--GHHH-HHHHHHHCCTTTCCEEEEEECCTTSTTSCCS-----
T ss_pred CC-EEEEEEEecCCC----CCCCeEEEECCCCCcHHH--HHHH-HHHHhcccccccCceEEEEECCCCCCCCCCC-----
Confidence 89 999887765442 345779999998776433 4443 344443 4999999999998754321
Q ss_pred cccCCcchHHHHHHHHHHHHHcCCCCCC-cEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 591 ALAKKQNCFDDFISASEYLISAGYTQSR-KLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 591 ~~~~~~~~~~D~~~~~~~L~~~~~~d~~-~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
......+++++.+.+..|++. ...+ +++++|+|+||.++..++.++|++.+.++...++.
T Consensus 160 -~~~~~~~~~~~a~~~~~l~~~--lg~~~~~~lvG~S~Gg~ia~~~A~~~p~~~~~~l~~~~~~ 220 (408)
T 3g02_A 160 -PLDKDFGLMDNARVVDQLMKD--LGFGSGYIIQGGDIGSFVGRLLGVGFDACKAVHLNFCNMS 220 (408)
T ss_dssp -CSSSCCCHHHHHHHHHHHHHH--TTCTTCEEEEECTHHHHHHHHHHHHCTTEEEEEESCCCCC
T ss_pred -CCCCCCCHHHHHHHHHHHHHH--hCCCCCEEEeCCCchHHHHHHHHHhCCCceEEEEeCCCCC
Confidence 112244577777777776665 2233 89999999999999999999998777777655443
No 325
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.89 E-value=5e-07 Score=94.90 Aligned_cols=245 Identities=13% Similarity=0.005 Sum_probs=141.0
Q ss_pred cEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCce-ecccccccccccccCccceeeeeeccccccccccccccc
Q 003878 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV-EADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 131 ~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
...+..+++||||++||-+. ...+|+|||++++.. ....+... .+
T Consensus 9 ~~~V~~~~~s~~g~~las~s-----~D~~v~iw~~~~~~~~~~~~l~gH-------~~---------------------- 54 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRMATCS-----SDKTIKIFEVEGETHKLIDTLTGH-------EG---------------------- 54 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEE-----TTSCEEEEEBCSSCBCCCEEECCC-------SS----------------------
T ss_pred cCceEEEEECCCCCEEEEEe-----CCCEEEEEecCCCCcEEEEEEccc-------cC----------------------
Confidence 34578899999999998543 345799999976421 11122211 01
Q ss_pred cceeeEEEeeeccccceeeeeeecccccceEEEEeC--CcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHD--SKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS 287 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspD--g~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~ 287 (789)
....++|+|+ |+.|+-... ...|.+|++.++..
T Consensus 55 --------------------------~V~~v~~s~~~~g~~l~s~s~-------------------D~~v~iWd~~~~~~ 89 (297)
T 2pm7_B 55 --------------------------PVWRVDWAHPKFGTILASCSY-------------------DGKVMIWKEENGRW 89 (297)
T ss_dssp --------------------------CEEEEEECCGGGCSEEEEEET-------------------TTEEEEEEBSSSCB
T ss_pred --------------------------CeEEEEecCCCcCCEEEEEcC-------------------CCEEEEEEcCCCce
Confidence 2467899874 777765433 24688899876543
Q ss_pred CcEEEEecCCCCeeEEEEEEecC--CcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce-eE
Q 003878 288 EDILCWKDPEHPKYIFSGHVTED--GQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YE 364 (789)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-~~ 364 (789)
.....+.. +...+..+.|+|+ |++|+..+. ...|.++|+.++.. .....+....... ..
T Consensus 90 ~~~~~~~~--h~~~v~~v~~~p~~~g~~l~s~s~-----d~~v~~wd~~~~~~-----------~~~~~~~~h~~~v~~~ 151 (297)
T 2pm7_B 90 SQIAVHAV--HSASVNSVQWAPHEYGPMLLVASS-----DGKVSVVEFKENGT-----------TSPIIIDAHAIGVNSA 151 (297)
T ss_dssp CCCEEECC--CSSCEEEEEECCGGGCSEEEEEET-----TSEEEEEEBCSSSC-----------BCCEEEECCSSCEEEE
T ss_pred EEEEEeec--CCCceeEEEeCcCCCCcEEEEEEC-----CCcEEEEEecCCCc-----------eeeeeeecccCccceE
Confidence 33333332 2344678999998 888876543 34588888876310 0011111111111 13
Q ss_pred EEecC-------------CCEEEEEECCCCCCceEEEEECCCCCC-e---EEeccCCCCceeeeEEEecC---CEEEEEE
Q 003878 365 VIAND-------------DTVFTFLTNKDAPKYKIIRVDLKEPND-W---FEVIPEAERDVLESATAVNL---NQMIVSY 424 (789)
Q Consensus 365 ~~s~d-------------G~~l~~~tn~~~~~~~L~~~dl~~~~~-~---~~l~~~~~~~~i~~v~~~~~---~~lv~~~ 424 (789)
.|+|+ ++.|+..+. +..|..+|+.++.. + ..+..+. ..+..++++++ +.++++.
T Consensus 152 ~~~p~~~~~~~~~~~~~~~~~l~sgs~----D~~v~lwd~~~~~~~~~~~~~l~~H~--~~V~~v~~sp~~~~~~~las~ 225 (297)
T 2pm7_B 152 SWAPATIEEDGEHNGTKESRKFVTGGA----DNLVKIWKYNSDAQTYVLESTLEGHS--DWVRDVAWSPTVLLRSYMASV 225 (297)
T ss_dssp EECCCC------------CCEEEEEET----TSCEEEEEEETTTTEEEEEEEECCCS--SCEEEEEECCCCSSSEEEEEE
T ss_pred eecCCcccccccCCCCCCcceEEEEcC----CCcEEEEEEcCCCceEEEEEEecCCC--CceEEEEECCCCCCceEEEEE
Confidence 36775 345543332 34577777765431 1 2232333 56889999985 3788888
Q ss_pred EeCCeEEEEEEECCCCc--e-eeecc--cCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 425 LSDVKYVLQIRDLKNGS--L-LHQLP--IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 425 ~~~g~~~L~~~dl~tG~--~-~~~l~--~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
..|+ .|.+|+++++. . ...+. .....+..++++|+++.|+.... -..+.+|+..
T Consensus 226 s~D~--~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~----D~~v~lw~~~ 284 (297)
T 2pm7_B 226 SQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGG----DNKVTLWKEN 284 (297)
T ss_dssp ETTS--CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEET----TSCEEEEEEC
T ss_pred ECCC--cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcC----CCcEEEEEEC
Confidence 8887 57788876542 1 12221 12455778899999987664332 2456666654
No 326
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=98.89 E-value=2.8e-08 Score=125.75 Aligned_cols=271 Identities=13% Similarity=0.035 Sum_probs=172.8
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccce
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIF 212 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 212 (789)
.+..+.+||||++++.+.. ...|++||+.++..+.. +... .+. ..+..+.|++
T Consensus 842 ~v~~~~~sp~~~~l~~~~~-----dg~v~vwd~~~~~~~~~-~~~h-------~~~----v~~v~~spdg---------- 894 (1249)
T 3sfz_A 842 TIQYCDFSPYDHLAVIALS-----QYCVELWNIDSRLKVAD-CRGH-------LSW----VHGVMFSPDG---------- 894 (1249)
T ss_dssp CCCEEEECSSTTEEEEECS-----SSCEEEEETTTTEEEEE-ECCC-------SSC----EEEEEECTTS----------
T ss_pred ceEEEEEcCCCCEEEEEeC-----CCeEEEEEcCCCceeee-cCCC-------ccc----eEEEEECCCC----------
Confidence 4567889999999986432 34699999999865431 1111 111 1222334555
Q ss_pred eeEEEeeeccccceeeeeeec-----------------------------------------------ccccceEEEEeC
Q 003878 213 FFFYLFSLVKSTIYSFWSVVS-----------------------------------------------QFKFSSIAWTHD 245 (789)
Q Consensus 213 ~~~~~~~s~~~g~~~l~~~~~-----------------------------------------------~~~~~~~~wspD 245 (789)
..++++..+|...+|.+.. ......++|+||
T Consensus 895 --~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~ 972 (1249)
T 3sfz_A 895 --SSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPH 972 (1249)
T ss_dssp --SEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTT
T ss_pred --CEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCC
Confidence 3566777888888887431 112356789999
Q ss_pred CcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCc
Q 003878 246 SKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPV 325 (789)
Q Consensus 246 g~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~ 325 (789)
|+.+++...+ ..|+++++.+... ...+ ..+...+..+.|||||++|+..+. .
T Consensus 973 g~~l~~g~~~-------------------g~i~i~d~~~~~~--~~~~--~~h~~~v~~l~~s~dg~~l~s~~~-----d 1024 (1249)
T 3sfz_A 973 LEYVAFGDED-------------------GAIKIIELPNNRV--FSSG--VGHKKAVRHIQFTADGKTLISSSE-----D 1024 (1249)
T ss_dssp SSEEEEEETT-------------------SCCEEEETTTTSC--EEEC--CCCSSCCCCEEECSSSSCEEEECS-----S
T ss_pred CCEEEEEcCC-------------------CCEEEEEcCCCce--eeec--ccCCCceEEEEECCCCCEEEEEcC-----C
Confidence 9988876433 2367778765432 2222 223334557899999999986543 2
Q ss_pred eEEEEEECCCCCCCcccccccCCCCccEeeeccccce-eEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCC
Q 003878 326 NKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA 404 (789)
Q Consensus 326 ~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~ 404 (789)
..|.++++.++. ........... ...+++++. ++..+ .++.|..+|+.+++....+..+.
T Consensus 1025 g~i~vwd~~~~~--------------~~~~~~~~~~v~~~~~~~~~~-l~~~~----~dg~v~vwd~~~~~~~~~~~~~~ 1085 (1249)
T 3sfz_A 1025 SVIQVWNWQTGD--------------YVFLQAHQETVKDFRLLQDSR-LLSWS----FDGTVKVWNVITGRIERDFTCHQ 1085 (1249)
T ss_dssp SBEEEEETTTTE--------------EECCBCCSSCEEEEEECSSSE-EEEEE----SSSEEEEEETTTTCCCEEEECCS
T ss_pred CEEEEEECCCCc--------------eEEEecCCCcEEEEEEcCCCc-EEEEE----CCCcEEEEECCCCceeEEEcccC
Confidence 458889988742 11111111111 233677654 44333 24679999998876444554444
Q ss_pred CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 405 ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 405 ~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
..+..+++++++.++++...++ .|++||+.+++....+..+.+.+..++++++++.++... .-+.++.||+.
T Consensus 1086 --~~v~~~~~s~d~~~l~s~s~d~--~v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~----~dg~i~vwd~~ 1157 (1249)
T 3sfz_A 1086 --GTVLSCAISSDATKFSSTSADK--TAKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGD----DNGEIRIWNVS 1157 (1249)
T ss_dssp --SCCCCEEECSSSSSCEEECCSS--CCCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEE----TTSCCCEEESS
T ss_pred --CcEEEEEECCCCCEEEEEcCCC--cEEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEe----CCCEEEEEECC
Confidence 4577889998777777777776 688999988877666666677788899999999776543 23568899998
Q ss_pred CCC
Q 003878 485 TET 487 (789)
Q Consensus 485 tg~ 487 (789)
+++
T Consensus 1158 ~~~ 1160 (1249)
T 3sfz_A 1158 DGQ 1160 (1249)
T ss_dssp SSC
T ss_pred CCc
Confidence 875
No 327
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=98.89 E-value=1.7e-07 Score=100.83 Aligned_cols=215 Identities=6% Similarity=-0.039 Sum_probs=124.5
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceeccc-ccccccccccCccceeeeeecccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRG 210 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 210 (789)
..+..+.++|||++|+.+.. ...|++||+++++..... +... . +
T Consensus 53 ~~v~~~~~~~~~~~l~~~~~-----dg~i~vwd~~~~~~~~~~~~~~~------~-~----------------------- 97 (372)
T 1k8k_C 53 GQVTGVDWAPDSNRIVTCGT-----DRNAYVWTLKGRTWKPTLVILRI------N-R----------------------- 97 (372)
T ss_dssp SCEEEEEEETTTTEEEEEET-----TSCEEEEEEETTEEEEEEECCCC------S-S-----------------------
T ss_pred CcccEEEEeCCCCEEEEEcC-----CCeEEEEECCCCeeeeeEEeecC------C-C-----------------------
Confidence 45788999999999986542 236999999888643211 1111 0 0
Q ss_pred ceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcE
Q 003878 211 IFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDI 290 (789)
Q Consensus 211 ~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~ 290 (789)
....++|+||++.|+....+ ..++++++.+......
T Consensus 98 -------------------------~v~~~~~~~~~~~l~~~~~d-------------------~~v~i~d~~~~~~~~~ 133 (372)
T 1k8k_C 98 -------------------------AARCVRWAPNEKKFAVGSGS-------------------RVISICYFEQENDWWV 133 (372)
T ss_dssp -------------------------CEEEEEECTTSSEEEEEETT-------------------SSEEEEEEETTTTEEE
T ss_pred -------------------------ceeEEEECCCCCEEEEEeCC-------------------CEEEEEEecCCCccee
Confidence 24789999999999877533 2366777665432111
Q ss_pred EEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcc---cccc--cCCCCccEeeeccccc-eeE
Q 003878 291 LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE---GFKK--RDGLLPFVKLIDGFDA-QYE 364 (789)
Q Consensus 291 ~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~---~~~~--~~~~~~~~~l~~~~~~-~~~ 364 (789)
.......+...+..+.|+|||++|+....+ ..++++|+........ .... .........+...... ...
T Consensus 134 ~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d-----g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 208 (372)
T 1k8k_C 134 CKHIKKPIRSTVLSLDWHPNSVLLAAGSCD-----FKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGV 208 (372)
T ss_dssp EEEECTTCCSCEEEEEECTTSSEEEEEETT-----SCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEE
T ss_pred eeeeecccCCCeeEEEEcCCCCEEEEEcCC-----CCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEE
Confidence 111112223456789999999998876533 3478888643110000 0000 0001111112111111 223
Q ss_pred EEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCC
Q 003878 365 VIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKN 439 (789)
Q Consensus 365 ~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~t 439 (789)
.|+|+|+.|+..+. ++.|..+|+.+++....+..+ ...+..+.+++++.+++.. .++ .|++|++.+
T Consensus 209 ~~~~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~~~-~d~--~i~i~~~~~ 274 (372)
T 1k8k_C 209 CFSANGSRVAWVSH----DSTVCLADADKKMAVATLASE--TLPLLAVTFITESSLVAAG-HDC--FPVLFTYDS 274 (372)
T ss_dssp EECSSSSEEEEEET----TTEEEEEEGGGTTEEEEEECS--SCCEEEEEEEETTEEEEEE-TTS--SCEEEEEET
T ss_pred EECCCCCEEEEEeC----CCEEEEEECCCCceeEEEccC--CCCeEEEEEecCCCEEEEE-eCC--eEEEEEccC
Confidence 48999988776553 367999999877633334333 2467888999877777766 565 566777665
No 328
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=98.89 E-value=1.1e-07 Score=101.53 Aligned_cols=72 Identities=7% Similarity=-0.009 Sum_probs=48.5
Q ss_pred Eec-CCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCeEEEEEEECCCCcee
Q 003878 366 IAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNGSLL 443 (789)
Q Consensus 366 ~s~-dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~~~L~~~dl~tG~~~ 443 (789)
++| ||+.+|+. ..+|+++|+++++ ....++.. .....+++++++ .+++ ...+ ..|.+||+++++.+
T Consensus 262 ~sp~dg~~l~~~------~~~v~~~d~~~~~-~~~~~~~~--~~~~~~~~s~dg~~l~~-~~~~--~~v~v~d~~~~~~~ 329 (349)
T 1jmx_B 262 RSPKDPNQIYGV------LNRLAKYDLKQRK-LIKAANLD--HTYYCVAFDKKGDKLYL-GGTF--NDLAVFNPDTLEKV 329 (349)
T ss_dssp ECSSCTTEEEEE------ESEEEEEETTTTE-EEEEEECS--SCCCEEEECSSSSCEEE-ESBS--SEEEEEETTTTEEE
T ss_pred ecCCCCCEEEEE------cCeEEEEECccCe-EEEEEcCC--CCccceEECCCCCEEEE-ecCC--CeEEEEecccccee
Confidence 578 99988875 3589999998876 32333322 234578888754 4555 3333 58999999988876
Q ss_pred eecccC
Q 003878 444 HQLPIE 449 (789)
Q Consensus 444 ~~l~~~ 449 (789)
..++.+
T Consensus 330 ~~~~~~ 335 (349)
T 1jmx_B 330 KNIKLP 335 (349)
T ss_dssp EEEECS
T ss_pred eeeecC
Confidence 666655
No 329
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.88 E-value=3.6e-06 Score=96.76 Aligned_cols=248 Identities=15% Similarity=0.118 Sum_probs=131.7
Q ss_pred ceEEEE----eCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEec-C-CC-----CeeEEEEE
Q 003878 238 SSIAWT----HDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD-P-EH-----PKYIFSGH 306 (789)
Q Consensus 238 ~~~~ws----pDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~-~-~~-----~~~~~~~~ 306 (789)
.++++| |||+++|+.... +.++.+++..+......+-... + +. ...+..+.
T Consensus 243 ~~ia~s~~~~pDGk~l~v~n~~------------------~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~ 304 (567)
T 1qks_A 243 RSIETSKMEGWEDKYAIAGAYW------------------PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAIL 304 (567)
T ss_dssp EEEEECCSTTCTTTEEEEEEEE------------------TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEE
T ss_pred ceeEEccccCCCCCEEEEEEcc------------------CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEE
Confidence 578999 799999987432 3456677765543221111110 0 00 11244677
Q ss_pred EecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceE
Q 003878 307 VTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKI 386 (789)
Q Consensus 307 ~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L 386 (789)
.|+++..+++.... ...|+++|..+.. ......+..+.......|++||+++++..+. ..+|
T Consensus 305 ~s~~~~~~vv~~~~----~g~v~~vd~~~~~-----------~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~---sn~V 366 (567)
T 1qks_A 305 ASHYRPEFIVNVKE----TGKILLVDYTDLN-----------NLKTTEISAERFLHDGGLDGSHRYFITAANA---RNKL 366 (567)
T ss_dssp ECSSSSEEEEEETT----TTEEEEEETTCSS-----------EEEEEEEECCSSEEEEEECTTSCEEEEEEGG---GTEE
T ss_pred EcCCCCEEEEEecC----CCeEEEEecCCCc-----------cceeeeeeccccccCceECCCCCEEEEEeCC---CCeE
Confidence 89998877766522 4679999987631 0011111111111123489999998876653 3579
Q ss_pred EEEECCCCCCeEEeccC-CC-CceeeeEEE-ecCCEEEEEEEeCCeEEEEEEECCCC-------ceeeecccC-CeeEEE
Q 003878 387 IRVDLKEPNDWFEVIPE-AE-RDVLESATA-VNLNQMIVSYLSDVKYVLQIRDLKNG-------SLLHQLPIE-IGSVNA 455 (789)
Q Consensus 387 ~~~dl~~~~~~~~l~~~-~~-~~~i~~v~~-~~~~~lv~~~~~~g~~~L~~~dl~tG-------~~~~~l~~~-~~~v~~ 455 (789)
.++|+++++ ....++- .. ...-.+..+ .++..-++....-+...|.+++.+++ +.++.+... .+.+ .
T Consensus 367 ~ViD~~t~k-l~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~-~ 444 (567)
T 1qks_A 367 VVIDTKEGK-LVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSL-F 444 (567)
T ss_dssp EEEETTTTE-EEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCC-C
T ss_pred EEEECCCCc-EEEEEeccCcCCCCccceeeECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCE-E
Confidence 999999876 3322322 11 111123333 44334344444434457999998863 344555543 2322 3
Q ss_pred eecccCCcEEEEEEcCCCCC-----cEEEEEECCCC-----CceEEEeeeccCCCCCCCCCcEEEEEEecCCCceEEEEE
Q 003878 456 ISARREDSVVFISFTSFLIP-----GIVYQCNLKTE-----TPEMKIFRETIIPGFDRSEFHVHQVFVPSKDGSTKIPMF 525 (789)
Q Consensus 456 ~s~s~d~~~l~~~~ss~~~P-----~~ly~~dl~tg-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~s~dg~~~i~~~ 525 (789)
+..+|+++.+++.. ...| .++..+|..+. +...+.+.-.+..++....-.+.++.| ++|| .++-+.
T Consensus 445 i~~~p~~~~l~v~~--~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~G-~~~~~s 520 (567)
T 1qks_A 445 IKTHPNSQYLYVDA--TLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEF-NKDG-TEVWFS 520 (567)
T ss_dssp EECCTTCSEEEEEC--TTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEE-CTTS-SEEEEE
T ss_pred EEeCCCCCeEEEec--CCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeE-CCCC-CEEEEE
Confidence 55789999888753 2334 48999998765 211133321100112112234555666 4678 777655
Q ss_pred EE
Q 003878 526 IV 527 (789)
Q Consensus 526 l~ 527 (789)
+.
T Consensus 521 ~~ 522 (567)
T 1qks_A 521 VW 522 (567)
T ss_dssp EE
T ss_pred ee
Confidence 44
No 330
>3ils_A PKS, aflatoxin biosynthesis polyketide synthase; A/B hydrolase, thioesterase, norsolorinic acid, P polyketide, acyltransferase; 1.70A {Aspergillus parasiticus}
Probab=98.88 E-value=6.5e-09 Score=107.75 Aligned_cols=101 Identities=9% Similarity=-0.002 Sum_probs=67.3
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 615 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~ 615 (789)
+..|.||++||+.+.... |.. +.. |. .|+.|+.+|+||.+. ......+++++.+.+..++..-.
T Consensus 19 ~~~~~lv~lhg~~~~~~~--~~~-~~~-l~-~~~~v~~~d~~G~~~----------~~~~~~~~~~~~~~~~~~i~~~~- 82 (265)
T 3ils_A 19 VARKTLFMLPDGGGSAFS--YAS-LPR-LK-SDTAVVGLNCPYARD----------PENMNCTHGAMIESFCNEIRRRQ- 82 (265)
T ss_dssp TSSEEEEEECCTTCCGGG--GTT-SCC-CS-SSEEEEEEECTTTTC----------GGGCCCCHHHHHHHHHHHHHHHC-
T ss_pred CCCCEEEEECCCCCCHHH--HHH-HHh-cC-CCCEEEEEECCCCCC----------CCCCCCCHHHHHHHHHHHHHHhC-
Confidence 456889999998765443 322 223 55 899999999999531 11122445555544443333211
Q ss_pred CCCcEEEEeeChHHHHHHHHHH---hCCCceeEEEecCCc
Q 003878 616 QSRKLCIEGGSNGGLLVGACIN---QRPDLFGCALAHVGV 652 (789)
Q Consensus 616 d~~~i~i~G~S~GG~l~~~~~~---~~pd~f~a~v~~~p~ 652 (789)
...++.++|||+||.++..++. .+|+.++++|+..+.
T Consensus 83 ~~~~~~l~GhS~Gg~ia~~~a~~l~~~~~~v~~lvl~~~~ 122 (265)
T 3ils_A 83 PRGPYHLGGWSSGGAFAYVVAEALVNQGEEVHSLIIIDAP 122 (265)
T ss_dssp SSCCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHhCCCCceEEEEEcCC
Confidence 2258999999999999999887 678888888876543
No 331
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.87 E-value=2.3e-07 Score=99.40 Aligned_cols=244 Identities=11% Similarity=0.070 Sum_probs=139.7
Q ss_pred CcEEEEeEEeCCC---CcEEEEEEecCCceEEEEEEEEcCC-CceecccccccccccccCccceeeeeeccccccccccc
Q 003878 130 GTAALIKVSVSED---AKYLAYALSYSGSDWATIKLMRIED-QIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLF 205 (789)
Q Consensus 130 ~~~~~~~~~~SpD---g~~la~~~~~~g~~~~~i~v~dl~t-g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 205 (789)
+...+..+++||| |++|+.+.. ...|++||+.+ +..+...+.... +
T Consensus 38 h~~~v~~~~~~~~~~~g~~l~~~~~-----dg~i~iw~~~~~~~~~~~~~~~h~-------~------------------ 87 (368)
T 3mmy_A 38 PDDSIGCLSFSPPTLPGNFLIAGSW-----ANDVRCWEVQDSGQTIPKAQQMHT-------G------------------ 87 (368)
T ss_dssp CSSCEEEEEECCTTSSSEEEEEEET-----TSEEEEEEECTTSCEEEEEEEECS-------S------------------
T ss_pred CCCceEEEEEcCCCCCceEEEEECC-----CCcEEEEEcCCCCceeEEEecccc-------C------------------
Confidence 3456889999999 688875432 34799999998 444322222110 0
Q ss_pred cccccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCC
Q 003878 206 LYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK 285 (789)
Q Consensus 206 ~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~ 285 (789)
....++|+||++.|+....+ ..|.+|++.+.
T Consensus 88 ------------------------------~v~~~~~~~~~~~l~s~~~d-------------------g~v~iwd~~~~ 118 (368)
T 3mmy_A 88 ------------------------------PVLDVCWSDDGSKVFTASCD-------------------KTAKMWDLSSN 118 (368)
T ss_dssp ------------------------------CEEEEEECTTSSEEEEEETT-------------------SEEEEEETTTT
T ss_pred ------------------------------CEEEEEECcCCCEEEEEcCC-------------------CcEEEEEcCCC
Confidence 25789999999999866432 36889998765
Q ss_pred CCCcEEEEecCCCCeeEEEEEE--ecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCC--------------
Q 003878 286 QSEDILCWKDPEHPKYIFSGHV--TEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL-------------- 349 (789)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~--SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~-------------- 349 (789)
.. ..+.. +...+..+.| +|+|++|+.... ...|+++|+.++..- ..+......
T Consensus 119 ~~--~~~~~---~~~~v~~~~~~~~~~~~~l~~~~~-----dg~i~vwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 187 (368)
T 3mmy_A 119 QA--IQIAQ---HDAPVKTIHWIKAPNYSCVMTGSW-----DKTLKFWDTRSSNPM-MVLQLPERCYCADVIYPMAVVAT 187 (368)
T ss_dssp EE--EEEEE---CSSCEEEEEEEECSSCEEEEEEET-----TSEEEEECSSCSSCS-EEEECSSCEEEEEEETTEEEEEE
T ss_pred Cc--eeecc---ccCceEEEEEEeCCCCCEEEEccC-----CCcEEEEECCCCcEE-EEEecCCCceEEEecCCeeEEEe
Confidence 32 22222 2334567888 999998876653 245888888764210 000000000
Q ss_pred --------------CccEeeecc--ccceeEEEecCCCE----EEEEECCCCCCceEEEEECCCCC---CeEEeccCCCC
Q 003878 350 --------------LPFVKLIDG--FDAQYEVIANDDTV----FTFLTNKDAPKYKIIRVDLKEPN---DWFEVIPEAER 406 (789)
Q Consensus 350 --------------~~~~~l~~~--~~~~~~~~s~dG~~----l~~~tn~~~~~~~L~~~dl~~~~---~~~~l~~~~~~ 406 (789)
......... .......+.+++.. ++..+ .++.|..+++.... ....+..+...
T Consensus 188 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~dg~i~i~~~~~~~~~~~~~~~~~~~~~ 263 (368)
T 3mmy_A 188 AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS----IEGRVAIHYINPPNPAKDNFTFKCHRSN 263 (368)
T ss_dssp GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE----TTSEEEEEESSCSCHHHHSEEEECSEEC
T ss_pred CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec----CCCcEEEEecCCCCccccceeeeeeecc
Confidence 000000000 00000001111110 22211 23567777776652 11222222210
Q ss_pred ----------ceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEE
Q 003878 407 ----------DVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISF 469 (789)
Q Consensus 407 ----------~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ 469 (789)
..+..+.+++++.++++...++ .|++||+.+++.+..+......+..+.++++++.++...
T Consensus 264 ~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s 334 (368)
T 3mmy_A 264 GTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG--RFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYAS 334 (368)
T ss_dssp ----CCCEEECCEEEEEECTTTCCEEEEETTS--CEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEE
T ss_pred cccccccccccceEEEEEecCCCEEEEEccCC--eEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEe
Confidence 1478899998777788888887 699999998887677766667788899999998776543
No 332
>2fj0_A JuvenIle hormone esterase; manduca sexta, alpha-beta hydrolase; HET: TFC; 2.70A {Trichoplusia NI}
Probab=98.87 E-value=1.2e-09 Score=125.31 Aligned_cols=129 Identities=14% Similarity=0.088 Sum_probs=86.7
Q ss_pred cCCCceEEEEEEEec-----CCCCCCCC----ccEEEEEcCCCCccCC---CCCCHHHHHHHHcCCeEEEEEeecCCC-C
Q 003878 515 SKDGSTKIPMFIVSK-----KNIKLDGS----HPCLLYGYGGFNISVT---PSFSVSRTILMRHLGAVFCIANIRGGG-E 581 (789)
Q Consensus 515 s~dg~~~i~~~l~~p-----~~~~~~~~----~P~ll~~hGg~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~RG~g-~ 581 (789)
+.|. +.+.++.| +.. ..++ .|+||++|||...... ..+.. ..+.++|++|+.+|||.+. +
T Consensus 87 ~edc---L~lnv~~P~~~~~~~~-~~~~~~~~~Pviv~iHGGg~~~g~~~~~~~~~---~~l~~~g~vvv~~nYRl~~~G 159 (551)
T 2fj0_A 87 SEAC---IHANIHVPYYALPRDA-ADKNRFAGLPVLVFIHGGGFAFGSGDSDLHGP---EYLVSKDVIVITFNYRLNVYG 159 (551)
T ss_dssp CSCC---CEEEEEEEGGGCCCC---------CEEEEEEECCSTTTSCCSCTTTCBC---TTGGGGSCEEEEECCCCHHHH
T ss_pred CCCC---eEEEEEecCccccccc-cccCcCCCCCEEEEEcCCccccCCCcccccCH---HHHHhCCeEEEEeCCcCCccc
Confidence 4555 45566677 321 2234 8999999998533222 22332 2344599999999999642 1
Q ss_pred CChhHHhcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHh--CCCceeEEEecCCcc
Q 003878 582 YGEEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGVM 653 (789)
Q Consensus 582 ~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~--~pd~f~a~v~~~p~~ 653 (789)
|... ......+...+.|.+++++|+.++- ..||+||.|+|+|+||.+++.++.. .+.+|+++|+++|..
T Consensus 160 f~~~---~~~~~~~n~gl~D~~~al~wv~~~i~~fggDp~~v~l~G~SaGg~~~~~~~~~~~~~~lf~~~i~~sg~~ 233 (551)
T 2fj0_A 160 FLSL---NSTSVPGNAGLRDMVTLLKWVQRNAHFFGGRPDDVTLMGQSAGAAATHILSLSKAADGLFRRAILMSGTS 233 (551)
T ss_dssp HCCC---SSSSCCSCHHHHHHHHHHHHHHHHTGGGTEEEEEEEEEEETHHHHHHHHHTTCGGGTTSCSEEEEESCCT
T ss_pred cccC---cccCCCCchhHHHHHHHHHHHHHHHHHhCCChhhEEEEEEChHHhhhhccccCchhhhhhhheeeecCCc
Confidence 1110 0011223456899999999998762 2599999999999999999988876 357999999999864
No 333
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.86 E-value=1.2e-07 Score=106.95 Aligned_cols=185 Identities=10% Similarity=0.074 Sum_probs=108.3
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCc-----EEEEe--cCCCCeeEEEEEEec
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED-----ILCWK--DPEHPKYIFSGHVTE 309 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~-----~~~~~--~~~~~~~~~~~~~Sp 309 (789)
..+++|||||+.|+....+ .+|.+|++.++.... ...+. ...+...+..++|||
T Consensus 132 v~svafSPDG~~LAsgs~D-------------------GtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP 192 (588)
T 2j04_A 132 YHCFEWNPIESSIVVGNED-------------------GELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYE 192 (588)
T ss_dssp EEEEEECSSSSCEEEEETT-------------------SEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEET
T ss_pred EEEEEEcCCCCEEEEEcCC-------------------CEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcC
Confidence 4689999999999976543 368889987653211 11221 123445788999999
Q ss_pred CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc-c-ceeEEEecCCCEEEEEECCCCCCceEE
Q 003878 310 DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF-D-AQYEVIANDDTVFTFLTNKDAPKYKII 387 (789)
Q Consensus 310 DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~-~-~~~~~~s~dG~~l~~~tn~~~~~~~L~ 387 (789)
|| ++..+. .+.++++++.++.. ...+..+..+. . ..-..|+ |+.++... ...|.
T Consensus 193 dg--Laass~-----D~tVrlWd~~~~~~----------~~~~~tL~~~h~~~V~svaFs--g~~LASa~-----~~tIk 248 (588)
T 2j04_A 193 DV--LVAALS-----NNSVFSMTVSASSH----------QPVSRMIQNASRRKITDLKIV--DYKVVLTC-----PGYVH 248 (588)
T ss_dssp TE--EEEEET-----TCCEEEECCCSSSS----------CCCEEEEECCCSSCCCCEEEE--TTEEEEEC-----SSEEE
T ss_pred Cc--EEEEeC-----CCeEEEEECCCCcc----------ccceeeecccccCcEEEEEEE--CCEEEEEe-----CCeEE
Confidence 99 544432 24588899877420 00112221111 1 1123476 57666432 25899
Q ss_pred EEECCCCCCeEEeccCCCCceeeeEEE--ecCCEEEEEEEeCCeEEEEEE-----ECCCCc-----------------ee
Q 003878 388 RVDLKEPNDWFEVIPEAERDVLESATA--VNLNQMIVSYLSDVKYVLQIR-----DLKNGS-----------------LL 443 (789)
Q Consensus 388 ~~dl~~~~~~~~l~~~~~~~~i~~v~~--~~~~~lv~~~~~~g~~~L~~~-----dl~tG~-----------------~~ 443 (789)
.+++.++. ...+.- +....+.++.+ ++++..+++..++|. +|+.. ..+ +. ..
T Consensus 249 LWd~~~~~-~~~~~~-gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d~~~~spd-~~l~a~~d~~v~lW~~~g~~l 324 (588)
T 2j04_A 249 KIDLKNYS-ISSLKT-GSLENFHIIPLNHEKESTILLMSNKTSY-KVLLEDELHVTAD-NIIAPYLEKKFKKWSTIWNEF 324 (588)
T ss_dssp EEETTTTE-EEEEEC-SCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESSSEEEECC-CSSHHHHHHHHHHTTTTTTSS
T ss_pred EEECCCCe-EEEEEc-CCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeeccEEECCC-ceEEEEcCCEEEEEECCCCce
Confidence 99998875 322321 23356778899 886778888887876 66653 222 21 11
Q ss_pred eecccCCeeEEEeecccCCcEEEEEE
Q 003878 444 HQLPIEIGSVNAISARREDSVVFISF 469 (789)
Q Consensus 444 ~~l~~~~~~v~~~s~s~d~~~l~~~~ 469 (789)
..+.. ...|.+++++|||..++..+
T Consensus 325 ~~~~~-~~~I~~va~SPdG~~lA~~~ 349 (588)
T 2j04_A 325 NNYET-TLVIHGISLSPDGYSIAIVY 349 (588)
T ss_dssp SSSCC-EEEEEEEEECTTSSEEEEEE
T ss_pred eeecc-ceEEEEEEECCCCCEEEEEE
Confidence 11111 33467788899998777544
No 334
>1kez_A Erythronolide synthase; polyketide synthase, modular polyketide synthase, thioesterase, 6-DEB, TE, DEBS, alpha, beta-hydrolase; 2.80A {Saccharopolyspora erythraea} SCOP: c.69.1.22 PDB: 1mo2_A
Probab=98.85 E-value=1.1e-08 Score=108.22 Aligned_cols=206 Identities=10% Similarity=-0.088 Sum_probs=118.9
Q ss_pred CCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHH-HHHHcC
Q 003878 535 DGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASE-YLISAG 613 (789)
Q Consensus 535 ~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~-~L~~~~ 613 (789)
.+..|.||++||..+......|.. ....+. .+|.|+.+|+||.|... ....+++++.+.+. .+.+.
T Consensus 64 ~~~~~~lvllhG~~~~~~~~~~~~-~~~~l~-~~~~v~~~d~~G~G~s~----------~~~~~~~~~a~~~~~~l~~~- 130 (300)
T 1kez_A 64 GPGEVTVICCAGTAAISGPHEFTR-LAGALR-GIAPVRAVPQPGYEEGE----------PLPSSMAAVAAVQADAVIRT- 130 (300)
T ss_dssp CSCSSEEEECCCSSTTCSTTTTHH-HHHHTS-SSCCBCCCCCTTSSTTC----------CBCSSHHHHHHHHHHHHHHH-
T ss_pred CCCCCeEEEECCCcccCcHHHHHH-HHHhcC-CCceEEEecCCCCCCCC----------CCCCCHHHHHHHHHHHHHHh-
Confidence 356789999999876543344553 345565 67999999999977521 11345666655543 44443
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHHhCC---CceeEEEecCCcccccc-ccc-c--cCCccchhhcCCCCcHHHHHH----
Q 003878 614 YTQSRKLCIEGGSNGGLLVGACINQRP---DLFGCALAHVGVMDMLR-YHK-F--TIGHAWVSDFGCSEEEEEFYW---- 682 (789)
Q Consensus 614 ~~d~~~i~i~G~S~GG~l~~~~~~~~p---d~f~a~v~~~p~~d~~~-~~~-~--~~~~~~~~e~g~p~~~~~~~~---- 682 (789)
.+.+++.++|+|+||.++..++.++| ++++++|+..+...... ... + .....+......+........
T Consensus 131 -~~~~~~~LvGhS~GG~vA~~~A~~~p~~g~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 209 (300)
T 1kez_A 131 -QGDKPFVVAGHSAGALMAYALATELLDRGHPPRGVVLIDVYPPGHQDAMNAWLEELTATLFDRETVRMDDTRLTALGAY 209 (300)
T ss_dssp -CSSCCEEEECCTHHHHHHHHHHHHTTTTTCCCSEEECBTCCCTTTCHHHHHHHHHHHGGGCCCCSSCCCHHHHHHHHHH
T ss_pred -cCCCCEEEEEECHhHHHHHHHHHHHHhcCCCccEEEEECCCCCcchhHHHHHHHHHHHHHHhCcCCccchHHHHHHHHH
Confidence 23468999999999999999999988 48999998877543221 000 0 000000000000111111111
Q ss_pred HHhcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCC
Q 003878 683 LIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVG 762 (789)
Q Consensus 683 l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~ 762 (789)
+.....+ ....+ ..|+|+++| .|+.+++.+ .. +... .....++.++++ ||...
T Consensus 210 ~~~~~~~-~~~~i----------~~P~lii~G-~d~~~~~~~-~~----~~~~---------~~~~~~~~~i~g-gH~~~ 262 (300)
T 1kez_A 210 DRLTGQW-RPRET----------GLPTLLVSA-GEPMGPWPD-DS----WKPT---------WPFEHDTVAVPG-DHFTM 262 (300)
T ss_dssp HHHTTTC-CCCCC----------SCCBEEEEE-SSCSSCCCS-SC----CSCC---------CSSCCEEEEESS-CTTTS
T ss_pred HHHHhcC-CCCCC----------CCCEEEEEe-CCCCCCCcc-cc----hhhh---------cCCCCeEEEecC-CChhh
Confidence 1111111 12333 679999999 577777654 21 2221 123467888998 99875
Q ss_pred C-chhhHHHHHHHHHHHHHHHh
Q 003878 763 L-PTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 763 ~-~~~~~~~~~~~~~~fl~~~l 783 (789)
. ... ....+.+.+||.+..
T Consensus 263 ~~e~~--~~~~~~i~~fl~~~~ 282 (300)
T 1kez_A 263 VQEHA--DAIARHIDAWLGGGN 282 (300)
T ss_dssp SSSCS--HHHHHHHHHHHTCC-
T ss_pred ccccH--HHHHHHHHHHHHhcc
Confidence 3 322 355667788886543
No 335
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=98.84 E-value=4.7e-07 Score=104.60 Aligned_cols=200 Identities=11% Similarity=0.080 Sum_probs=122.5
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|+|||+.|+....+. .....|+.++.+. ... ....+...+..+.|+|+|+++++
T Consensus 119 v~~~~~s~~~~~l~~~~~~~---------------~~~~~v~~~d~~~----~~~--~~~~~~~~v~~~~~~~~~~~~l~ 177 (615)
T 1pgu_A 119 ISDISWDFEGRRLCVVGEGR---------------DNFGVFISWDSGN----SLG--EVSGHSQRINACHLKQSRPMRSM 177 (615)
T ss_dssp EEEEEECTTSSEEEEEECCS---------------SCSEEEEETTTCC----EEE--ECCSCSSCEEEEEECSSSSCEEE
T ss_pred EEEEEEeCCCCEEEEeccCC---------------CCccEEEEEECCC----cce--eeecCCccEEEEEECCCCCcEEE
Confidence 57899999999998875432 1123566666321 122 22233445678999999996555
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc---ce-eEEEecC-CCEEEEEECCCCCCceEEEEEC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD---AQ-YEVIAND-DTVFTFLTNKDAPKYKIIRVDL 391 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~---~~-~~~~s~d-G~~l~~~tn~~~~~~~L~~~dl 391 (789)
.... ...|.++|+.++. ....+..... .. ...|+|+ |+.|+..+. ++.|..+|+
T Consensus 178 ~~~~----d~~v~vwd~~~~~-------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~----dg~i~vwd~ 236 (615)
T 1pgu_A 178 TVGD----DGSVVFYQGPPFK-------------FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGS----DRKISCFDG 236 (615)
T ss_dssp EEET----TTEEEEEETTTBE-------------EEEEECSSSCTTCCEEEEEECSTTCCEEEEEET----TCCEEEEET
T ss_pred EEeC----CCcEEEEeCCCcc-------------eeeeecccCCCCceEEEEEECCCCCCEEEEEeC----CCeEEEEEC
Confidence 5433 3568889987631 1222222211 12 2348999 888776543 357999999
Q ss_pred CCCCCeEEeccC--CCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC----CeeEEEeecccCCcEE
Q 003878 392 KEPNDWFEVIPE--AERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE----IGSVNAISARREDSVV 465 (789)
Q Consensus 392 ~~~~~~~~l~~~--~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~----~~~v~~~s~s~d~~~l 465 (789)
.+++....+... .....+..+.++ ++.++++...++ .|.+||+.+++....+..+ ...+..+.++ +++.+
T Consensus 237 ~~~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l 312 (615)
T 1pgu_A 237 KSGEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADA--TIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVAT-GNGRI 312 (615)
T ss_dssp TTCCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTS--EEEEEETTTTEEEEEEECCTTCGGGCEEEEEEE-ETTEE
T ss_pred CCCCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCC--cEEEEECCCCcEEEEEcCCCCcccCceeEEEeC-CCCeE
Confidence 887633333120 223567888888 677777787776 7899999888765555543 2334344443 66655
Q ss_pred EEEEcCCCCCcEEEEEECCCC
Q 003878 466 FISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 466 ~~~~ss~~~P~~ly~~dl~tg 486 (789)
+... .-+.++.||+.++
T Consensus 313 ~~~~----~~g~i~~~d~~~~ 329 (615)
T 1pgu_A 313 ISLS----LDGTLNFYELGHD 329 (615)
T ss_dssp EEEE----TTSCEEEEETTEE
T ss_pred EEEE----CCCCEEEEECCCC
Confidence 5433 2467888888765
No 336
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.83 E-value=1.5e-06 Score=91.03 Aligned_cols=238 Identities=6% Similarity=-0.090 Sum_probs=140.4
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccccee
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFF 213 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 213 (789)
..++.|+|||+.|.++-...+ .|+++|.+++ ... +... .+
T Consensus 30 ~eg~~~d~~g~~l~~~~~~~~----~i~~~~~~~~-~~~--~~~~----------------------~~----------- 69 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVRQN----RTWAWSDDGQ-LSP--EMHP----------------------SH----------- 69 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGGGT----EEEEEETTSC-EEE--EESS----------------------CS-----------
T ss_pred ccCCeEeCCCCEEEEEeCCCC----EEEEEECCCC-eEE--EECC----------------------CC-----------
Confidence 467899999997766554333 7999999987 321 1111 00
Q ss_pred eEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEE
Q 003878 214 FFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCW 293 (789)
Q Consensus 214 ~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~ 293 (789)
...+++++|||+ |+++.. ....|++++..++..+ .+.
T Consensus 70 ----------------------~~~~l~~~~dg~-l~v~~~------------------~~~~i~~~d~~~g~~~--~~~ 106 (296)
T 3e5z_A 70 ----------------------HQNGHCLNKQGH-LIACSH------------------GLRRLERQREPGGEWE--SIA 106 (296)
T ss_dssp ----------------------SEEEEEECTTCC-EEEEET------------------TTTEEEEECSTTCCEE--EEE
T ss_pred ----------------------CcceeeECCCCc-EEEEec------------------CCCeEEEEcCCCCcEE--EEe
Confidence 136789999997 444421 1235788877554321 121
Q ss_pred ecCCCC--eeEEEEEEecCCcEEEEEEEc-C------------CCCceEEEEEECCCCCCCcccccccCCCCccEeeecc
Q 003878 294 KDPEHP--KYIFSGHVTEDGQYLVMCIEE-N------------CDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG 358 (789)
Q Consensus 294 ~~~~~~--~~~~~~~~SpDG~~l~~~~~~-~------------~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~ 358 (789)
...... .....+.++|||+.++ +... + ......||.++.+ +. ...+...
T Consensus 107 ~~~~~~~~~~~~~i~~d~~G~l~v-td~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~--------------~~~~~~~ 170 (296)
T 3e5z_A 107 DSFEGKKLNSPNDVCLAPDGSLWF-SDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT--------------LSAPIRD 170 (296)
T ss_dssp CEETTEECCCCCCEEECTTSCEEE-EECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC--------------EEEEECC
T ss_pred eccCCCCCCCCCCEEECCCCCEEE-ECCccccccccccccccccCCCcEEEEECCC-CC--------------EEEeecC
Confidence 111100 1123578899998544 3210 0 0013478988865 21 1222222
Q ss_pred ccc-eeEEEecCCCEEEEEECCCCCCceEEEEECC-CCCCe---EEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEE
Q 003878 359 FDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLK-EPNDW---FEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQ 433 (789)
Q Consensus 359 ~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~-~~~~~---~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~ 433 (789)
... .-..|+|||+.+ +... ...+|++++++ ++. + ..++ ........++.+.+++.+++.. ++ .|+
T Consensus 171 ~~~~~gi~~s~dg~~l-v~~~---~~~~i~~~~~~~~g~-~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~--~v~ 240 (296)
T 3e5z_A 171 RVKPNGLAFLPSGNLL-VSDT---GDNATHRYCLNARGE-TEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GD--GVH 240 (296)
T ss_dssp CSSEEEEEECTTSCEE-EEET---TTTEEEEEEECSSSC-EEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TT--EEE
T ss_pred CCCCccEEECCCCCEE-EEeC---CCCeEEEEEECCCCc-CcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CC--eEE
Confidence 211 223489999987 5433 24689999886 333 3 3333 2223345678888877777766 33 699
Q ss_pred EEECCCCceeeecccCCeeEEEeec-ccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 434 IRDLKNGSLLHQLPIEIGSVNAISA-RREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 434 ~~dl~tG~~~~~l~~~~~~v~~~s~-s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+|+.+ |+....+..+.+ +..+.+ +++++.|+++.. ..++++++.+++
T Consensus 241 ~~~~~-g~~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~-----~~l~~~~~~~~~ 288 (296)
T 3e5z_A 241 VLTPD-GDELGRVLTPQT-TSNLCFGGPEGRTLYMTVS-----TEFWSIETNVRG 288 (296)
T ss_dssp EECTT-SCEEEEEECSSC-CCEEEEESTTSCEEEEEET-----TEEEEEECSCCB
T ss_pred EECCC-CCEEEEEECCCC-ceeEEEECCCCCEEEEEcC-----CeEEEEEccccc
Confidence 99997 776667766654 555666 578888887654 389999998774
No 337
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=98.83 E-value=4.2e-07 Score=98.74 Aligned_cols=245 Identities=7% Similarity=-0.043 Sum_probs=140.0
Q ss_pred CcEEEEeEEeCC-CCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccc
Q 003878 130 GTAALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYL 208 (789)
Q Consensus 130 ~~~~~~~~~~Sp-Dg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 208 (789)
+...+..+.||| |+++|+.+ +.. ..|++||+.++..... ... ..+.+.. .+..+.|++
T Consensus 117 h~~~v~~~~~~~~~~~~l~s~-~~d----~~i~iwd~~~~~~~~~--~~~----~~~~~~v----~~~~~~~~~------ 175 (383)
T 3ei3_B 117 PGDAITGMKFNQFNTNQLFVS-SIR----GATTLRDFSGSVIQVF--AKT----DSWDYWY----CCVDVSVSR------ 175 (383)
T ss_dssp TTCBEEEEEEETTEEEEEEEE-ETT----TEEEEEETTSCEEEEE--ECC----CCSSCCE----EEEEEETTT------
T ss_pred cCCceeEEEeCCCCCCEEEEE-eCC----CEEEEEECCCCceEEE--ecc----CCCCCCe----EEEEECCCC------
Confidence 345688899999 66776643 333 3799999997543221 110 0000001 111223455
Q ss_pred ccceeeEEEeeeccccceeeeeeec---------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEE
Q 003878 209 RGIFFFFYLFSLVKSTIYSFWSVVS---------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 279 (789)
Q Consensus 209 ~~~~~~~~~~~s~~~g~~~l~~~~~---------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 279 (789)
.+++++..+|...+|.+.. .-....++|+||++.++++.. ....|++
T Consensus 176 ------~~l~~~~~d~~i~i~d~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~------------------~d~~i~i 231 (383)
T 3ei3_B 176 ------QMLATGDSTGRLLLLGLDGHEIFKEKLHKAKVTHAEFNPRCDWLMATSS------------------VDATVKL 231 (383)
T ss_dssp ------TEEEEEETTSEEEEEETTSCEEEEEECSSSCEEEEEECSSCTTEEEEEE------------------TTSEEEE
T ss_pred ------CEEEEECCCCCEEEEECCCCEEEEeccCCCcEEEEEECCCCCCEEEEEe------------------CCCEEEE
Confidence 3677888889999998643 222467899999994444422 2236889
Q ss_pred EECCCCCCCcEEEEecCCCCeeEEEEEEec-CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee--
Q 003878 280 HFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-- 356 (789)
Q Consensus 280 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-- 356 (789)
|++.+.......+... .+...+..+.|+| ||++|+.... ...|.++|+.++... ..+....
T Consensus 232 wd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~l~~~~~-----d~~i~iwd~~~~~~~----------~~~~~~~~~ 295 (383)
T 3ei3_B 232 WDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTKLLTTDQ-----RNEIRVYSSYDWSKP----------DQIIIHPHR 295 (383)
T ss_dssp EEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCEEEEEES-----SSEEEEEETTBTTSC----------SEEEECCBC
T ss_pred EeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCEEEEEcC-----CCcEEEEECCCCccc----------ccccccccc
Confidence 9987643222222211 1234567899999 9999986653 356899999874210 0000000
Q ss_pred --ccccceeEEEecCCCEEEEEEC-----CCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCe
Q 003878 357 --DGFDAQYEVIANDDTVFTFLTN-----KDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVK 429 (789)
Q Consensus 357 --~~~~~~~~~~s~dG~~l~~~tn-----~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~ 429 (789)
.........|+|++..+.+... ..+.++.|..+|+.+++....+..+.....+..+++++++.++++.. ++
T Consensus 296 ~~~~~~~~~~~~~p~~~~~~~~~s~dg~~s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g~~l~s~s-d~- 373 (383)
T 3ei3_B 296 QFQHLTPIKATWHPMYDLIVAGRYPDDQLLLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTGDVLASGM-GF- 373 (383)
T ss_dssp CCTTSCCCCCEECSSSSEEEEECBCCTTTCTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTSSEEEEEE-TT-
T ss_pred ccccccceEEeccCCCCceEEEecCCcccccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCccEEEEec-CC-
Confidence 0000011235555554443321 12346789999998877444444333234566678888777777775 65
Q ss_pred EEEEEEECC
Q 003878 430 YVLQIRDLK 438 (789)
Q Consensus 430 ~~L~~~dl~ 438 (789)
.|.+|+++
T Consensus 374 -~i~iw~~~ 381 (383)
T 3ei3_B 374 -NILIWNRE 381 (383)
T ss_dssp -EEEEEECC
T ss_pred -cEEEEecC
Confidence 79999986
No 338
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=98.83 E-value=2e-06 Score=92.69 Aligned_cols=174 Identities=11% Similarity=0.049 Sum_probs=89.8
Q ss_pred EEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCC--CcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCC
Q 003878 303 FSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPE--GLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKD 380 (789)
Q Consensus 303 ~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~ 380 (789)
..+.+||||++|++.... ...+++++++.... +.+.+... ..........+.......|+|||+.+|+....
T Consensus 158 ~~~~~spdg~~l~~~~~~----~~~v~v~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~- 231 (361)
T 3scy_A 158 HCVRITPDGKYLLADDLG----TDQIHKFNINPNANADNKEKFLTK-GTPEAFKVAPGSGPRHLIFNSDGKFAYLINEI- 231 (361)
T ss_dssp EEEEECTTSSEEEEEETT----TTEEEEEEECTTCCTTTCCCCEEE-EEEEEEECCTTCCEEEEEECTTSSEEEEEETT-
T ss_pred eEEEECCCCCEEEEEeCC----CCEEEEEEEcCCCCcccccceeec-ccccceecCCCCCCeEEEEcCCCCEEEEEcCC-
Confidence 468999999999876532 24566666654210 00000000 00001111112222335599999988876543
Q ss_pred CCCceEEEEECCCCCCeEE---eccC-CCCceeeeEEEecCCEEEEEEEeCCeEEEEEEEC--CCCce--eeecccCCee
Q 003878 381 APKYKIIRVDLKEPNDWFE---VIPE-AERDVLESATAVNLNQMIVSYLSDVKYVLQIRDL--KNGSL--LHQLPIEIGS 452 (789)
Q Consensus 381 ~~~~~L~~~dl~~~~~~~~---l~~~-~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl--~tG~~--~~~l~~~~~~ 452 (789)
...|.+++++++. ++. +... ........+.++++++.++....++...|.+|++ ++|+. +..+.. ...
T Consensus 232 --~~~v~v~~~~~g~-~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~-g~~ 307 (361)
T 3scy_A 232 --GGTVIAFRYADGM-LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLT-GIH 307 (361)
T ss_dssp --TCEEEEEEEETTE-EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEEC-SSC
T ss_pred --CCeEEEEEecCCc-eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecC-CCC
Confidence 3567777776553 222 1111 1112345788988655443343331235666665 45653 122222 223
Q ss_pred EEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 453 VNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 453 v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+..++++||++.++++.. ...--.+|.+|.++++
T Consensus 308 ~~~~~~spdg~~l~~~~~-~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 308 PRNFIITPNGKYLLVACR-DTNVIQIFERDQATGL 341 (361)
T ss_dssp CCEEEECTTSCEEEEEET-TTTEEEEEEECTTTCC
T ss_pred CceEEECCCCCEEEEEEC-CCCCEEEEEEECCCCc
Confidence 446788999998776543 2333455667877884
No 339
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.83 E-value=4.2e-06 Score=93.35 Aligned_cols=259 Identities=10% Similarity=0.078 Sum_probs=150.4
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
+...+..+.++||+ +|+ +.+. ..+|++||+.+++.+. .+... .+....+..++ .|++
T Consensus 161 h~~~V~~l~~~~~~-~l~-s~s~----dg~i~vwd~~~~~~~~-~~~~h-------~~~v~~l~~~~--~~~~------- 217 (464)
T 3v7d_B 161 HDGGVWALKYAHGG-ILV-SGST----DRTVRVWDIKKGCCTH-VFEGH-------NSTVRCLDIVE--YKNI------- 217 (464)
T ss_dssp CSSCEEEEEECSTT-EEE-EEET----TSCEEEEETTTTEEEE-EECCC-------SSCEEEEEEEE--SSSC-------
T ss_pred CCcCEEEEEEcCCC-EEE-EEeC----CCCEEEEECCCCcEEE-EECCC-------CCccEEEEEec--CCCC-------
Confidence 44567888999999 444 3332 3479999999996543 11111 11011111111 0222
Q ss_pred cceeeEEEeeeccccceeeeeeecc-------------------------------cccceEEEEeCCcEEEEEEccCCC
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVSQ-------------------------------FKFSSIAWTHDSKGFFYSRYPAPK 258 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~~-------------------------------~~~~~~~wspDg~~i~y~~~~~~~ 258 (789)
.+++++..+|+..+|.+... ....-.+++++++.|+....+
T Consensus 218 -----~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d--- 289 (464)
T 3v7d_B 218 -----KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYD--- 289 (464)
T ss_dssp -----EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETT---
T ss_pred -----CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCC---
Confidence 56888889999999987541 011223567788877765432
Q ss_pred CCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCC
Q 003878 259 EGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPE 338 (789)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~ 338 (789)
..|+++++.+.. .+..+. .+...+..+.++|||++++..+.+ ..|+++|+.++.
T Consensus 290 ----------------~~i~vwd~~~~~--~~~~~~--~~~~~v~~~~~~~~~~~l~sg~~d-----g~i~vwd~~~~~- 343 (464)
T 3v7d_B 290 ----------------NTLIVWDVAQMK--CLYILS--GHTDRIYSTIYDHERKRCISASMD-----TTIRIWDLENGE- 343 (464)
T ss_dssp ----------------SCEEEEETTTTE--EEEEEC--CCSSCEEEEEEETTTTEEEEEETT-----SCEEEEETTTTE-
T ss_pred ----------------CeEEEEECCCCc--EEEEec--CCCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCc-
Confidence 348888887542 222232 234456789999999999876543 448899998742
Q ss_pred CcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCC
Q 003878 339 GLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN 418 (789)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~ 418 (789)
....+..... ....+..+++.|+..+. ++.|..+|+.++.. .....+. ..+..+.+++++
T Consensus 344 ------------~~~~~~~h~~-~v~~~~~~~~~l~s~s~----dg~v~vwd~~~~~~-~~~~~~~--~~~~~~~~~~~~ 403 (464)
T 3v7d_B 344 ------------LMYTLQGHTA-LVGLLRLSDKFLVSAAA----DGSIRGWDANDYSR-KFSYHHT--NLSAITTFYVSD 403 (464)
T ss_dssp ------------EEEEECCCSS-CEEEEEECSSEEEEEET----TSEEEEEETTTCCE-EEEEECT--TCCCEEEEEECS
T ss_pred ------------EEEEEeCCCC-cEEEEEEcCCEEEEEeC----CCcEEEEECCCCce-eeeecCC--CCccEEEEEeCC
Confidence 1222222211 22223334666664433 46799999988762 2222222 334445566656
Q ss_pred EEEEEEEeCCeEEEEEEECCCCceeeeccc-CCeeEEEeecccCCcEEEEEEc
Q 003878 419 QMIVSYLSDVKYVLQIRDLKNGSLLHQLPI-EIGSVNAISARREDSVVFISFT 470 (789)
Q Consensus 419 ~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~-~~~~v~~~s~s~d~~~l~~~~s 470 (789)
.+++... ++ .|.+||+++|+.+..+.. ....+..++++ ++.++++.+
T Consensus 404 ~~l~~~~-dg--~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~--~~~l~~~~~ 451 (464)
T 3v7d_B 404 NILVSGS-EN--QFNIYNLRSGKLVHANILKDADQIWSVNFK--GKTLVAAVE 451 (464)
T ss_dssp SEEEEEE-TT--EEEEEETTTCCEEESCTTTTCSEEEEEEEE--TTEEEEEEE
T ss_pred CEEEEec-CC--eEEEEECCCCcEEehhhccCCCcEEEEEec--CCEEEEEEE
Confidence 6666666 55 799999998987654333 35667667764 565665543
No 340
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.82 E-value=2.8e-07 Score=102.19 Aligned_cols=246 Identities=10% Similarity=0.058 Sum_probs=142.6
Q ss_pred CcEEEEeEEeCC-CCcEEEEEEecCCceEEEEEEEEcCC---CceecccccccccccccCccceeeeeeccccccccccc
Q 003878 130 GTAALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIED---QIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLF 205 (789)
Q Consensus 130 ~~~~~~~~~~Sp-Dg~~la~~~~~~g~~~~~i~v~dl~t---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 205 (789)
+...+..+++|| ||++||.+. ...+|+|||+.+ +......+.. .| .+- ..+..+.|++
T Consensus 62 h~~~V~~~~~s~~~~~~l~s~s-----~dg~v~vwd~~~~~~~~~~~~~~~~-----~h-~~~----v~~~~~~~~~--- 123 (437)
T 3gre_A 62 EPNSITSSAVSPGETPYLITGS-----DQGVIKIWNLKEIIVGEVYSSSLTY-----DC-SST----VTQITMIPNF--- 123 (437)
T ss_dssp TTSCEEEEEEECSSSCEEEEEE-----TTSEEEEEEHHHHHTTCCCSCSEEE-----EC-SSC----EEEEEECTTS---
T ss_pred CCCceEEEEECCCCCCEEEEec-----CCceEEEeECcccccCcccceeeec-----cC-CCC----EEEEEEeCCC---
Confidence 345688999999 999998543 345899999987 4311101100 00 010 1112223444
Q ss_pred cccccceeeEEEeeeccccceeeeeeecc-----------cccceEE----------------EEeCCcEEEEEEccCCC
Q 003878 206 LYLRGIFFFFYLFSLVKSTIYSFWSVVSQ-----------FKFSSIA----------------WTHDSKGFFYSRYPAPK 258 (789)
Q Consensus 206 ~~~~~~~~~~~~~~s~~~g~~~l~~~~~~-----------~~~~~~~----------------wspDg~~i~y~~~~~~~ 258 (789)
.+++++..+|...||.+... .....+. |+||++.|+....
T Consensus 124 ---------~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~---- 190 (437)
T 3gre_A 124 ---------DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN---- 190 (437)
T ss_dssp ---------SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET----
T ss_pred ---------CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC----
Confidence 46788889999999987410 0111222 5567777766543
Q ss_pred CCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCC
Q 003878 259 EGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPE 338 (789)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~ 338 (789)
...|++|++.+.. .+..+..+.+...+..++|+|||++|+....+ ..|.++|+.++.
T Consensus 191 ---------------d~~i~iwd~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d-----g~i~iwd~~~~~- 247 (437)
T 3gre_A 191 ---------------LSRVIIFDIRTLE--RLQIIENSPRHGAVSSICIDEECCVLILGTTR-----GIIDIWDIRFNV- 247 (437)
T ss_dssp ---------------TSEEEEEETTTCC--EEEEEECCGGGCCEEEEEECTTSCEEEEEETT-----SCEEEEETTTTE-
T ss_pred ---------------CCeEEEEeCCCCe--eeEEEccCCCCCceEEEEECCCCCEEEEEcCC-----CeEEEEEcCCcc-
Confidence 2368999987653 23344432233456789999999999876643 348889988742
Q ss_pred CcccccccCCCCccEeee-cccccee-EEE----ecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCC--------
Q 003878 339 GLEGFKKRDGLLPFVKLI-DGFDAQY-EVI----ANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-------- 404 (789)
Q Consensus 339 ~~~~~~~~~~~~~~~~l~-~~~~~~~-~~~----s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~-------- 404 (789)
+...+. .+..... ..| +++|..|+ ... .++.|..+|+.+++....+..+.
T Consensus 248 ------------~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~-s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 311 (437)
T 3gre_A 248 ------------LIRSWSFGDHAPITHVEVCQFYGKNSVIVV-GGS---SKTFLTIWNFVKGHCQYAFINSDEQPSMEHF 311 (437)
T ss_dssp ------------EEEEEBCTTCEEEEEEEECTTTCTTEEEEE-EES---TTEEEEEEETTTTEEEEEEESSSSCCCGGGG
T ss_pred ------------EEEEEecCCCCceEEEEeccccCCCccEEE-EEc---CCCcEEEEEcCCCcEEEEEEcCCCCCcccee
Confidence 112111 1111111 113 34554444 322 34689999998765223332221
Q ss_pred ----------------CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeeccc
Q 003878 405 ----------------ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI 448 (789)
Q Consensus 405 ----------------~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~ 448 (789)
....+..+.+++ +.++++...++ .|++||+.+++....+..
T Consensus 312 ~~~~~~l~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~--~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 312 LPIEKGLEELNFCGIRSLNALSTISVSN-DKILLTDEATS--SIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp SCBCSSGGGCCCCCCCSGGGGCCEEEET-TEEEEEEGGGT--EEEEEETTCGGGCEEEEC
T ss_pred cccccccccceecccccCCceEEEEECC-ceEEEecCCCC--eEEEEECCCcccceEEec
Confidence 123356678884 78888888777 799999998876555543
No 341
>3lcr_A Tautomycetin biosynthetic PKS; alpha-beta hydrolase, thioesterase, polyketide synthase, phosphopantetheine, transferase, hydrolase; 2.00A {Streptomyces SP}
Probab=98.81 E-value=3.5e-08 Score=105.27 Aligned_cols=208 Identities=7% Similarity=-0.109 Sum_probs=115.3
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHH-HHHHcCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASE-YLISAGY 614 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~-~L~~~~~ 614 (789)
+..|.||++||.........|.. +...|. .||.|+.+|+||.|... ....+++++.+.+. .+.+.
T Consensus 79 ~~~~~lv~lhG~~~~~~~~~~~~-~~~~L~-~~~~v~~~d~~G~G~~~----------~~~~~~~~~~~~~~~~l~~~-- 144 (319)
T 3lcr_A 79 QLGPQLILVCPTVMTTGPQVYSR-LAEELD-AGRRVSALVPPGFHGGQ----------ALPATLTVLVRSLADVVQAE-- 144 (319)
T ss_dssp CSSCEEEEECCSSTTCSGGGGHH-HHHHHC-TTSEEEEEECTTSSTTC----------CEESSHHHHHHHHHHHHHHH--
T ss_pred CCCCeEEEECCCCcCCCHHHHHH-HHHHhC-CCceEEEeeCCCCCCCC----------CCCCCHHHHHHHHHHHHHHh--
Confidence 45689999999422222334443 445565 89999999999977411 11224444433322 22222
Q ss_pred CCCCcEEEEeeChHHHHHHHHHHhC---CCceeEEEecCCcccccc--ccc-c--cCCccchh---hcCCCC-cHHHHHH
Q 003878 615 TQSRKLCIEGGSNGGLLVGACINQR---PDLFGCALAHVGVMDMLR--YHK-F--TIGHAWVS---DFGCSE-EEEEFYW 682 (789)
Q Consensus 615 ~d~~~i~i~G~S~GG~l~~~~~~~~---pd~f~a~v~~~p~~d~~~--~~~-~--~~~~~~~~---e~g~p~-~~~~~~~ 682 (789)
....++.++|||+||.++..++.+. |+.++++|+..+...... ... . ........ .+.... .......
T Consensus 145 ~~~~~~~lvGhS~Gg~vA~~~A~~~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 224 (319)
T 3lcr_A 145 VADGEFALAGHSSGGVVAYEVARELEARGLAPRGVVLIDSYSFDGDGGRPEELFRSALNERFVEYLRLTGGGNLSQRITA 224 (319)
T ss_dssp HTTSCEEEEEETHHHHHHHHHHHHHHHTTCCCSCEEEESCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
T ss_pred cCCCCEEEEEECHHHHHHHHHHHHHHhcCCCccEEEEECCCCCCccchhhHHHHHHHHHHHHhhhhcccCCCchhHHHHH
Confidence 1225899999999999999998887 888888887765432211 000 0 00000000 011111 0111111
Q ss_pred HH----hcCcccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCC
Q 003878 683 LI----KYSPLHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPIIGRIERKAG 758 (789)
Q Consensus 683 l~----~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~g 758 (789)
+. .+..+ ....+ ..|+|+++|.+ +.+++.....+.+.+.. ...+.++++ |
T Consensus 225 ~~~~~~~~~~~-~~~~i----------~~PvLli~g~~-~~~~~~~~~~~~~~~~~-------------~~~~~~~~g-~ 278 (319)
T 3lcr_A 225 QVWCLELLRGW-RPEGL----------TAPTLYVRPAQ-PLVEQEKPEWRGDVLAA-------------MGQVVEAPG-D 278 (319)
T ss_dssp HHHHHHHTTTC-CCCCC----------SSCEEEEEESS-CSSSCCCTHHHHHHHHT-------------CSEEEEESS-C
T ss_pred HHHHHHHHhcC-CCCCc----------CCCEEEEEeCC-CCCCcccchhhhhcCCC-------------CceEEEeCC-C
Confidence 11 11111 11232 67999999987 67777777777665543 246677765 6
Q ss_pred cCCCCchhhHHHHHHHHHHHHHHHh
Q 003878 759 HGVGLPTQKMIDEAADRYGFMAKML 783 (789)
Q Consensus 759 H~~~~~~~~~~~~~~~~~~fl~~~l 783 (789)
|..........+..+.+.+||.+..
T Consensus 279 H~~~~~~~~~~~va~~i~~fL~~~~ 303 (319)
T 3lcr_A 279 HFTIIEGEHVASTAHIVGDWLREAH 303 (319)
T ss_dssp TTGGGSTTTHHHHHHHHHHHHHHHH
T ss_pred cHHhhCcccHHHHHHHHHHHHHhcc
Confidence 6644331123466778889998764
No 342
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=98.81 E-value=8.6e-07 Score=97.84 Aligned_cols=220 Identities=10% Similarity=0.030 Sum_probs=145.8
Q ss_pred EEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC
Q 003878 215 FYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT 284 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~ 284 (789)
.+++++..+|+..||.+.. .-....++|+|||+.|+....+ ..|.+|++.+
T Consensus 121 ~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D-------------------~~i~iwd~~~ 181 (410)
T 1vyh_C 121 SVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSAD-------------------MTIKLWDFQG 181 (410)
T ss_dssp SEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETT-------------------SCCCEEETTS
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCC-------------------CeEEEEeCCC
Confidence 4788889999999998654 1123678999999988765443 2367778765
Q ss_pred CCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce-e
Q 003878 285 KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-Y 363 (789)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 363 (789)
.. .+.....+...+..+.|+|||++|+..+. ...|.++|+.++. ....+....... .
T Consensus 182 ~~----~~~~~~~h~~~V~~v~~~p~~~~l~s~s~-----D~~i~~wd~~~~~-------------~~~~~~~h~~~v~~ 239 (410)
T 1vyh_C 182 FE----CIRTMHGHDHNVSSVSIMPNGDHIVSASR-----DKTIKMWEVQTGY-------------CVKTFTGHREWVRM 239 (410)
T ss_dssp SC----EEECCCCCSSCEEEEEECSSSSEEEEEET-----TSEEEEEETTTCC-------------EEEEEECCSSCEEE
T ss_pred Cc----eeEEEcCCCCCEEEEEEeCCCCEEEEEeC-----CCeEEEEECCCCc-------------EEEEEeCCCccEEE
Confidence 32 22222233445678999999999876553 3558999998742 122222221111 2
Q ss_pred EEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecC--------------------CEEEEE
Q 003878 364 EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL--------------------NQMIVS 423 (789)
Q Consensus 364 ~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~--------------------~~lv~~ 423 (789)
..++++|+.|+..+. +..|..+|+.+++....+..+. ..+..+.+.++ +.++++
T Consensus 240 ~~~~~~g~~l~s~s~----D~~v~vwd~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~s 313 (410)
T 1vyh_C 240 VRPNQDGTLIASCSN----DQTVRVWVVATKECKAELREHR--HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLS 313 (410)
T ss_dssp EEECTTSSEEEEEET----TSCEEEEETTTCCEEEEECCCS--SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEE
T ss_pred EEECCCCCEEEEEcC----CCeEEEEECCCCceeeEecCCC--ceEEEEEEcCcccccchhhhccccccccCCCCCEEEE
Confidence 337888887765443 3568889998776233343333 45777777763 346777
Q ss_pred EEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 424 YLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 424 ~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
...++ .|++||+.+|+....+..+...+..+.+++++..++-. + .-..++.||+.+++
T Consensus 314 gs~D~--~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~-s---~D~~i~vwd~~~~~ 371 (410)
T 1vyh_C 314 GSRDK--TIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSC-A---DDKTLRVWDYKNKR 371 (410)
T ss_dssp EETTS--EEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEE-E---TTTEEEEECCTTSC
T ss_pred EeCCC--eEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEE-e---CCCeEEEEECCCCc
Confidence 88887 79999999888766666556678888999998866532 2 34689999988775
No 343
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.81 E-value=9e-08 Score=106.53 Aligned_cols=206 Identities=7% Similarity=-0.052 Sum_probs=116.3
Q ss_pred cceEEEEe-CCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEE
Q 003878 237 FSSIAWTH-DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLV 315 (789)
Q Consensus 237 ~~~~~wsp-Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~ 315 (789)
+..++|+| |++.|+-... ...|.+|++.+... ..+.........+..+.++|||++|+
T Consensus 167 V~~l~f~p~~~~~l~s~s~-------------------D~~v~iwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~ 225 (435)
T 4e54_B 167 ITGLKFNPLNTNQFYASSM-------------------EGTTRLQDFKGNIL--RVFASSDTINIWFCSLDVSASSRMVV 225 (435)
T ss_dssp CCEEEECSSCTTEEEEECS-------------------SSCEEEEETTSCEE--EEEECCSSCSCCCCCEEEETTTTEEE
T ss_pred EEEEEEeCCCCCEEEEEeC-------------------CCEEEEeeccCCce--eEEeccCCCCccEEEEEECCCCCEEE
Confidence 57899998 5666664322 23488888865321 12222222233345788999999988
Q ss_pred EEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEecCCCEEEEEECCCCCCceEEEEECCCC
Q 003878 316 MCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 394 (789)
Q Consensus 316 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~ 394 (789)
.... ...|+++|+.+.. ...+........ ..|+|+++.+++.... +..|..+|+...
T Consensus 226 ~g~~-----dg~i~~wd~~~~~--------------~~~~~~h~~~v~~v~~~p~~~~~~~s~s~---d~~v~iwd~~~~ 283 (435)
T 4e54_B 226 TGDN-----VGNVILLNMDGKE--------------LWNLRMHKKKVTHVALNPCCDWFLATASV---DQTVKIWDLRQV 283 (435)
T ss_dssp EECS-----SSBEEEEESSSCB--------------CCCSBCCSSCEEEEEECTTCSSEEEEEET---TSBCCEEETTTC
T ss_pred EEeC-----CCcEeeeccCcce--------------eEEEecccceEEeeeecCCCceEEEEecC---cceeeEEecccc
Confidence 6543 2448889987531 111111111122 3488988766655433 346777888765
Q ss_pred CCeEEecc-CCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCC------eeEEEeecccCCcEEEE
Q 003878 395 NDWFEVIP-EAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEI------GSVNAISARREDSVVFI 467 (789)
Q Consensus 395 ~~~~~l~~-~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~------~~v~~~s~s~d~~~l~~ 467 (789)
.....+.. ......+..+.+++++..+++...++ .|++||+.+++....+.... .......+++++..+.+
T Consensus 284 ~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 361 (435)
T 4e54_B 284 RGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKS--EIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVV 361 (435)
T ss_dssp CSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSS--CEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEE
T ss_pred cccceEEEeeeccccccceeECCCCCeeEEEcCCC--EEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEE
Confidence 41112211 11124577888888777788888887 68899998776533332210 01111234555555544
Q ss_pred EEcC--------CCCCcEEEEEECCCCC
Q 003878 468 SFTS--------FLIPGIVYQCNLKTET 487 (789)
Q Consensus 468 ~~ss--------~~~P~~ly~~dl~tg~ 487 (789)
..+. ......+..||..+++
T Consensus 362 ~~~~d~~~~~~~~~~~~~i~iwd~~~g~ 389 (435)
T 4e54_B 362 GRYPDPNFKSCTPYELRTIDVFDGNSGK 389 (435)
T ss_dssp ECCCCTTSCCSSTTCCCCEEEECSSSCC
T ss_pred EEcCCCCeEEEEecCCCEEEEEECCCCc
Confidence 3321 1233468889988885
No 344
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=98.80 E-value=2.6e-06 Score=89.57 Aligned_cols=220 Identities=15% Similarity=0.137 Sum_probs=139.3
Q ss_pred EEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC
Q 003878 215 FYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT 284 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~ 284 (789)
.+++++..+|...||.... ......++|+|||+.|+....+ ..|.+|++.+
T Consensus 36 ~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d-------------------~~i~vwd~~~ 96 (312)
T 4ery_A 36 EWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDD-------------------KTLKIWDVSS 96 (312)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT-------------------SEEEEEETTT
T ss_pred CEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCC-------------------CEEEEEECCC
Confidence 3677888999999997643 2224678999999998876432 3588899876
Q ss_pred CCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce-e
Q 003878 285 KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-Y 363 (789)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 363 (789)
... +..+.. +...+..+.|+|++++|+....+ ..|.++|+.++. ....+....... .
T Consensus 97 ~~~--~~~~~~--~~~~v~~~~~~~~~~~l~s~~~d-----~~i~iwd~~~~~-------------~~~~~~~~~~~v~~ 154 (312)
T 4ery_A 97 GKC--LKTLKG--HSNYVFCCNFNPQSNLIVSGSFD-----ESVRIWDVKTGK-------------CLKTLPAHSDPVSA 154 (312)
T ss_dssp CCE--EEEEEC--CSSCEEEEEECSSSSEEEEEETT-----SCEEEEETTTCC-------------EEEEECCCSSCEEE
T ss_pred CcE--EEEEcC--CCCCEEEEEEcCCCCEEEEEeCC-----CcEEEEECCCCE-------------EEEEecCCCCcEEE
Confidence 532 223333 23446678999999998876543 348899998742 122222211112 2
Q ss_pred EEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCcee
Q 003878 364 EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLL 443 (789)
Q Consensus 364 ~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~ 443 (789)
..|+++|+.|+..+. ++.|..+|+.+++....+.... ...+..+.+++++..++....++ .|++||+.+++..
T Consensus 155 ~~~~~~~~~l~~~~~----d~~i~~wd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~d~--~i~iwd~~~~~~~ 227 (312)
T 4ery_A 155 VHFNRDGSLIVSSSY----DGLCRIWDTASGQCLKTLIDDD-NPPVSFVKFSPNGKYILAATLDN--TLKLWDYSKGKCL 227 (312)
T ss_dssp EEECTTSSEEEEEET----TSCEEEEETTTCCEEEEECCSS-CCCEEEEEECTTSSEEEEEETTT--EEEEEETTTTEEE
T ss_pred EEEcCCCCEEEEEeC----CCcEEEEECCCCceeeEEeccC-CCceEEEEECCCCCEEEEEcCCC--eEEEEECCCCcEE
Confidence 348899987775443 3578999998876333443332 34577788888777777777776 7899999888765
Q ss_pred eecccCCe---eEEEeecc-cCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 444 HQLPIEIG---SVNAISAR-REDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 444 ~~l~~~~~---~v~~~s~s-~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
..+..+.. .+. ..++ +++.. +++. ..-+.++.||+.+++
T Consensus 228 ~~~~~~~~~~~~~~-~~~~~~~~~~-l~sg---~~dg~i~vwd~~~~~ 270 (312)
T 4ery_A 228 KTYTGHKNEKYCIF-ANFSVTGGKW-IVSG---SEDNLVYIWNLQTKE 270 (312)
T ss_dssp EEECSSCCSSSCCC-EEEECSSSCE-EEEC---CTTSCEEEEETTTCC
T ss_pred EEEEecCCceEEEE-EEEEeCCCcE-EEEE---CCCCEEEEEECCCch
Confidence 55543311 111 1222 34443 3332 345689999998875
No 345
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=98.79 E-value=3e-07 Score=97.59 Aligned_cols=236 Identities=13% Similarity=0.041 Sum_probs=135.8
Q ss_pred cEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccc
Q 003878 131 TAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRG 210 (789)
Q Consensus 131 ~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 210 (789)
...+..+.+||||++|+-+. ....|++|+...+.......... .........|.+
T Consensus 86 ~~~V~~~~~s~dg~~l~s~~-----~d~~i~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~-------- 140 (340)
T 4aow_A 86 SHFVSDVVISSDGQFALSGS-----WDGTLRLWDLTTGTTTRRFVGHT------------KDVLSVAFSSDN-------- 140 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEE-----TTSEEEEEETTTTEEEEEEECCS------------SCEEEEEECTTS--------
T ss_pred CCCEEEEEECCCCCEEEEEc-----ccccceEEeecccceeeeecCCC------------CceeEEEEeecC--------
Confidence 34578899999999998433 23479999998885433111110 000111122333
Q ss_pred ceeeEEEeeeccccceeeeeeec-----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEE
Q 003878 211 IFFFFYLFSLVKSTIYSFWSVVS-----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 279 (789)
Q Consensus 211 ~~~~~~~~~s~~~g~~~l~~~~~-----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 279 (789)
..++++..+|...+|.+.. .-....++|++++...++... .....|++
T Consensus 141 ----~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~-----------------~~d~~i~i 199 (340)
T 4aow_A 141 ----RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSC-----------------GWDKLVKV 199 (340)
T ss_dssp ----SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEE-----------------ETTSCEEE
T ss_pred ----ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEE-----------------cCCCEEEE
Confidence 3466777888888887543 111245677777654333221 12234788
Q ss_pred EECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc
Q 003878 280 HFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF 359 (789)
Q Consensus 280 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~ 359 (789)
+++.+... ...+. .+...+..++|+|||++|+.... ...|.++|+.+.. +...+....
T Consensus 200 ~d~~~~~~--~~~~~--~h~~~v~~~~~s~~~~~l~s~s~-----Dg~i~iwd~~~~~-------------~~~~~~~~~ 257 (340)
T 4aow_A 200 WNLANCKL--KTNHI--GHTGYLNTVTVSPDGSLCASGGK-----DGQAMLWDLNEGK-------------HLYTLDGGD 257 (340)
T ss_dssp EETTTTEE--EEEEC--CCSSCEEEEEECTTSSEEEEEET-----TCEEEEEETTTTE-------------EEEEEECSS
T ss_pred EECCCCce--eeEec--CCCCcEEEEEECCCCCEEEEEeC-----CCeEEEEEeccCc-------------eeeeecCCc
Confidence 88875421 22222 33445678999999999886553 3568889988731 122222221
Q ss_pred cceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEecc-------CCCCceeeeEEEecCCEEEEEEEeCCeEEE
Q 003878 360 DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP-------EAERDVLESATAVNLNQMIVSYLSDVKYVL 432 (789)
Q Consensus 360 ~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~-------~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L 432 (789)
......++|++..+.. + .+..|..+|++++.....+-. ......+..+++++++.++++...|+ .|
T Consensus 258 ~v~~~~~~~~~~~~~~-~----~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg--~v 330 (340)
T 4aow_A 258 IINALCFSPNRYWLCA-A----TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLFAGYTDN--LV 330 (340)
T ss_dssp CEEEEEECSSSSEEEE-E----ETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEEEEETTS--CE
T ss_pred eEEeeecCCCCceeec-c----CCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEEEEeCCC--EE
Confidence 1122347787664442 2 235788889876531111111 11224577899998777888888887 68
Q ss_pred EEEECCCCc
Q 003878 433 QIRDLKNGS 441 (789)
Q Consensus 433 ~~~dl~tG~ 441 (789)
++|++++|+
T Consensus 331 ~iW~~~tGt 339 (340)
T 4aow_A 331 RVWQVTIGT 339 (340)
T ss_dssp EEEEEEC--
T ss_pred EEEeCCCcC
Confidence 899998885
No 346
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.79 E-value=5.7e-06 Score=88.18 Aligned_cols=230 Identities=11% Similarity=0.052 Sum_probs=137.6
Q ss_pred EeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceee
Q 003878 135 IKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFF 214 (789)
Q Consensus 135 ~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~ 214 (789)
.++.|+||++.|.++-..++ .|+++|.++++........
T Consensus 52 egp~~~~~~~~l~~~d~~~~----~i~~~d~~~~~~~~~~~~~------------------------------------- 90 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNILER----ELHELHLASGRKTVHALPF------------------------------------- 90 (326)
T ss_dssp EEEEEETTTTEEEEEEGGGT----EEEEEETTTTEEEEEECSS-------------------------------------
T ss_pred cCCeEeCCCCEEEEEECCCC----EEEEEECCCCcEEEEECCC-------------------------------------
Confidence 57889999888877643333 7999999988543211111
Q ss_pred EEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEe
Q 003878 215 FYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWK 294 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~ 294 (789)
....++|+|||+.++.. . ..|++++..++.. ..+..
T Consensus 91 ---------------------~v~~i~~~~dg~l~v~~-~--------------------~gl~~~d~~~g~~--~~~~~ 126 (326)
T 2ghs_A 91 ---------------------MGSALAKISDSKQLIAS-D--------------------DGLFLRDTATGVL--TLHAE 126 (326)
T ss_dssp ---------------------CEEEEEEEETTEEEEEE-T--------------------TEEEEEETTTCCE--EEEEC
T ss_pred ---------------------cceEEEEeCCCeEEEEE-C--------------------CCEEEEECCCCcE--EEEee
Confidence 14678999999755532 1 1388888765432 12222
Q ss_pred cCC--CCeeEEEEEEecCCcEEEEEEEcC--CCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEEecC
Q 003878 295 DPE--HPKYIFSGHVTEDGQYLVMCIEEN--CDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIAND 369 (789)
Q Consensus 295 ~~~--~~~~~~~~~~SpDG~~l~~~~~~~--~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~d 369 (789)
... .......+.++|||+. ++..... ......||.++ + +. ...+..... .....|++|
T Consensus 127 ~~~~~~~~~~~~i~~d~~G~l-~v~~~~~~~~~~~~~l~~~~-~-g~--------------~~~~~~~~~~~~~i~~s~d 189 (326)
T 2ghs_A 127 LESDLPGNRSNDGRMHPSGAL-WIGTMGRKAETGAGSIYHVA-K-GK--------------VTKLFADISIPNSICFSPD 189 (326)
T ss_dssp SSTTCTTEEEEEEEECTTSCE-EEEEEETTCCTTCEEEEEEE-T-TE--------------EEEEEEEESSEEEEEECTT
T ss_pred CCCCCCCCCCCCEEECCCCCE-EEEeCCCcCCCCceEEEEEe-C-Cc--------------EEEeeCCCcccCCeEEcCC
Confidence 211 1234567899999984 4443321 11246799998 3 31 112222111 122358999
Q ss_pred CCEEEEEECCCCCCceEEEEECC--CC-C--CeEEecc-CCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCcee
Q 003878 370 DTVFTFLTNKDAPKYKIIRVDLK--EP-N--DWFEVIP-EAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLL 443 (789)
Q Consensus 370 G~~l~~~tn~~~~~~~L~~~dl~--~~-~--~~~~l~~-~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~ 443 (789)
|+.+|+.... ..+|++++++ ++ . ..+.+.. ........++.+.+++.+++....++ .|++++++ |+..
T Consensus 190 g~~lyv~~~~---~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~--~v~~~d~~-g~~~ 263 (326)
T 2ghs_A 190 GTTGYFVDTK---VNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEG--AVDRYDTD-GNHI 263 (326)
T ss_dssp SCEEEEEETT---TCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTT--EEEEECTT-CCEE
T ss_pred CCEEEEEECC---CCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCC--EEEEECCC-CCEE
Confidence 9999886543 3689999975 44 2 1122211 11123456788877677777665444 79999985 7766
Q ss_pred eecccCCeeEEEeecc-cCCcEEEEEEcCC
Q 003878 444 HQLPIEIGSVNAISAR-REDSVVFISFTSF 472 (789)
Q Consensus 444 ~~l~~~~~~v~~~s~s-~d~~~l~~~~ss~ 472 (789)
+.+..+...+..++++ ++++.++++....
T Consensus 264 ~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 264 ARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 6777765557777877 7888888876543
No 347
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.79 E-value=2.5e-06 Score=92.91 Aligned_cols=73 Identities=8% Similarity=0.042 Sum_probs=49.4
Q ss_pred EEEecC-CEEEEEEEeC-------CeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEEC
Q 003878 412 ATAVNL-NQMIVSYLSD-------VKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNL 483 (789)
Q Consensus 412 v~~~~~-~~lv~~~~~~-------g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl 483 (789)
+.++++ +++|+..... ....|+++|+++++.++.|+.+. ...++.+++|++.++++.+. .-..+..+|+
T Consensus 272 ~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~-~p~~i~~s~Dg~~~l~v~~~--~~~~V~ViD~ 348 (373)
T 2mad_H 272 VAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGH-DVDAISVAQDGGPDLYALSA--GTEVLHIYDA 348 (373)
T ss_pred EEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCC-CcCeEEECCCCCeEEEEEcC--CCCeEEEEEC
Confidence 455554 5566654321 23489999999888877886653 24467889999955555432 2379999999
Q ss_pred CCCC
Q 003878 484 KTET 487 (789)
Q Consensus 484 ~tg~ 487 (789)
++++
T Consensus 349 ~t~~ 352 (373)
T 2mad_H 349 GAGD 352 (373)
T ss_pred CCCC
Confidence 9885
No 348
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=98.78 E-value=6.9e-07 Score=97.21 Aligned_cols=245 Identities=11% Similarity=0.001 Sum_probs=143.9
Q ss_pred EEEEeEEeCCC----C---cEEEEEEecCCceEEEEEEEEcCCCce-----ecccccccccccccC--ccceeeeeeccc
Q 003878 132 AALIKVSVSED----A---KYLAYALSYSGSDWATIKLMRIEDQIV-----EADALSWVCFCFSHS--FGYFFHLTISLL 197 (789)
Q Consensus 132 ~~~~~~~~SpD----g---~~la~~~~~~g~~~~~i~v~dl~tg~~-----~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 197 (789)
..+..+.++|| | ++|+.+.. . ..|++||+.+++. +. .+... ..+ .+....+..++.
T Consensus 63 ~~v~~~~~~~~~~~~g~~~~~l~s~~~-d----g~i~iw~~~~~~~~~~~~~~-~~~~~----~~~~~~~~v~~~~~~~~ 132 (397)
T 1sq9_A 63 SGLHHVDVLQAIERDAFELCLVATTSF-S----GDLLFYRITREDETKKVIFE-KLDLL----DSDMKKHSFWALKWGAS 132 (397)
T ss_dssp TCEEEEEEEEEEETTTEEEEEEEEEET-T----SCEEEEEEEECTTTCCEEEE-EECCS----CTTGGGSCEEEEEEECC
T ss_pred CcEEEEEEecccccCCccccEEEEEcC-C----CCEEEEEccCCcccccccce-eeccc----ccccCCCcEEEEEEeec
Confidence 34788899999 9 88875433 2 3699999998864 21 11110 000 011111221111
Q ss_pred cccccccccccccceeeEE-Eeeeccccceeeeeeec----------------cc------------ccceEEEEeCCcE
Q 003878 198 NVPTYKLFLYLRGIFFFFY-LFSLVKSTIYSFWSVVS----------------QF------------KFSSIAWTHDSKG 248 (789)
Q Consensus 198 ~~p~~~~~~~~~~~~~~~~-~~~s~~~g~~~l~~~~~----------------~~------------~~~~~~wspDg~~ 248 (789)
..|++ .. ++++..+|...+|.+.. .+ ....++|+||+ .
T Consensus 133 ~~~~~------------~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~ 199 (397)
T 1sq9_A 133 NDRLL------------SHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-L 199 (397)
T ss_dssp C----------------CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-E
T ss_pred cCCCC------------ceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-e
Confidence 11444 35 77778889888987764 11 13568999999 5
Q ss_pred EEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEec-CCC---CeeEEEEEEecCCcEEEEEEEcCCCC
Q 003878 249 FFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD-PEH---PKYIFSGHVTEDGQYLVMCIEENCDP 324 (789)
Q Consensus 249 i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~-~~~---~~~~~~~~~SpDG~~l~~~~~~~~~~ 324 (789)
|+... ....|+++++.+.. .+..+.. ..+ ...+..+.|+|||++|+....++.
T Consensus 200 l~~~~-------------------~dg~i~i~d~~~~~--~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~-- 256 (397)
T 1sq9_A 200 IATGF-------------------NNGTVQISELSTLR--PLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNS-- 256 (397)
T ss_dssp EEEEC-------------------TTSEEEEEETTTTE--EEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETT--
T ss_pred EEEEe-------------------CCCcEEEEECCCCc--eeEEEeccccccccCCccceEEECCCCCEEEEEecCCC--
Confidence 55442 23458889987642 2233333 002 334678999999999987764311
Q ss_pred ceEEEEEECCCCCCCcccccccCCCCccEeeec-------------cccc-eeEEEecCCCEEEEEECCCCCCceEEEEE
Q 003878 325 VNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-------------GFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVD 390 (789)
Q Consensus 325 ~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-------------~~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~d 390 (789)
...|.++|+.++. +...+.. .... ....|+|+|+.|+..+. ++.|..+|
T Consensus 257 ~g~i~i~d~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~iwd 319 (397)
T 1sq9_A 257 FGCITLYETEFGE-------------RIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGW----DGKLRFWD 319 (397)
T ss_dssp EEEEEEEETTTCC-------------EEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEET----TSEEEEEE
T ss_pred CceEEEEECCCCc-------------ccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeC----CCeEEEEE
Confidence 2569999998742 1112211 1111 12348999998776543 46899999
Q ss_pred CCCCCCeEEec------cCC-------------CCceeeeEEEecCC----------EEEEEEEeCCeEEEEEEECCCCc
Q 003878 391 LKEPNDWFEVI------PEA-------------ERDVLESATAVNLN----------QMIVSYLSDVKYVLQIRDLKNGS 441 (789)
Q Consensus 391 l~~~~~~~~l~------~~~-------------~~~~i~~v~~~~~~----------~lv~~~~~~g~~~L~~~dl~tG~ 441 (789)
+.+++....+. .+. ....+..+.+++++ .++++...++ .|.+|++++|+
T Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg--~i~iw~~~~g~ 397 (397)
T 1sq9_A 320 VKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDR--SIRWFREAGGK 397 (397)
T ss_dssp TTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTT--EEEEEEEEC--
T ss_pred cCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccccccceEEEecCCC--cEEEEEcCCCC
Confidence 98876333333 220 03568899999854 6888888887 68888887663
No 349
>2bce_A Cholesterol esterase; hydrolase, serine esterase, lipase; 1.60A {Bos taurus} SCOP: c.69.1.1 PDB: 1akn_A* 1aql_A* 1f6w_A 1jmy_A
Probab=98.78 E-value=4.4e-09 Score=120.84 Aligned_cols=134 Identities=17% Similarity=0.156 Sum_probs=87.8
Q ss_pred EecCCCceEEEEEEEecCCCC-CCCCccEEEEEcCCCCccCCCC---C----CHHHHHHHHcCCeEEEEEeecCCC-CCC
Q 003878 513 VPSKDGSTKIPMFIVSKKNIK-LDGSHPCLLYGYGGFNISVTPS---F----SVSRTILMRHLGAVFCIANIRGGG-EYG 583 (789)
Q Consensus 513 ~~s~dg~~~i~~~l~~p~~~~-~~~~~P~ll~~hGg~~~~~~~~---~----~~~~~~~l~~~G~~v~~~~~RG~g-~~g 583 (789)
+.+.|. .. +-++.|+... .+++.|+||++|||........ + ......+..+.|++|+.+|||.+. +|.
T Consensus 75 ~~sedc-l~--lnv~~P~~~~~~~~~~PV~v~iHGGg~~~Gs~~~~~~~~~~~~~~~~la~~~~vvvV~~nYRLg~~Gfl 151 (579)
T 2bce_A 75 YGNEDC-LY--LNIWVPQGRKEVSHDLPVMIWIYGGAFLMGASQGANFLSNYLYDGEEIATRGNVIVVTFNYRVGPLGFL 151 (579)
T ss_dssp ESCSCC-CE--EEEEEEECSSSCCCSEEEEEECCCCSEEEC-------CTTGGGCCHHHHHHHTCEEEEECCCCHHHHHC
T ss_pred CCCCCC-CE--EEEEECCCCCCCCCCCeEEEEECCCcccCCCCCccccccccccChHHHhcCCCEEEEEeCCccccccCC
Confidence 345666 44 4566787543 3467899999999953322211 1 111123444457999999999542 121
Q ss_pred hhHHhcccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHh--CCCceeEEEecCCc
Q 003878 584 EEWHKGGALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQ--RPDLFGCALAHVGV 652 (789)
Q Consensus 584 ~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~--~pd~f~a~v~~~p~ 652 (789)
.. ......+...+.|.++|++|+.++- -.||+||.|+|+|+||.++..++.. ...+|+++|+++|.
T Consensus 152 ~~---~~~~~pgn~gl~D~~~Al~wv~~ni~~fGgDp~~Vti~G~SAGg~~~~~~~~~~~~~~lf~~ai~~Sg~ 222 (579)
T 2bce_A 152 ST---GDSNLPGNYGLWDQHMAIAWVKRNIEAFGGDPDQITLFGESAGGASVSLQTLSPYNKGLIKRAISQSGV 222 (579)
T ss_dssp CC---SSTTCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHCGGGTTTCSEEEEESCC
T ss_pred cC---CCCCCCCccchHHHHHHHHHHHHHHHHhCCCcccEEEecccccchheeccccCcchhhHHHHHHHhcCC
Confidence 11 0001112235899999999998752 3699999999999999999888765 35699999998874
No 350
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.78 E-value=1.5e-06 Score=93.87 Aligned_cols=234 Identities=8% Similarity=0.016 Sum_probs=147.2
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
..+..++|||||++||.+.+ . .+++||+.+++.+... ...
T Consensus 20 ~~V~~v~fs~dg~~la~g~~-----~-~~~iw~~~~~~~~~~~-~~~--------------------------------- 59 (355)
T 3vu4_A 20 NPVTDYEFNQDQSCLILSTL-----K-SFEIYNVHPVAHIMSQ-EMR--------------------------------- 59 (355)
T ss_dssp CCCCEEEECTTSSEEEEECS-----S-EEEEEEETTEEEEEEE-ECS---------------------------------
T ss_pred CceEEEEECCCCCEEEEEcC-----C-EEEEEecCCcceeeee-ecC---------------------------------
Confidence 34678899999999985432 1 3679998877543211 000
Q ss_pred eeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEE
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDIL 291 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~ 291 (789)
....++|+++++.++++.. ....|.+|++.++.. +.
T Consensus 60 ------------------------~~~~~~~~~~~~~~~~~~~------------------~d~~v~iWd~~~~~~--~~ 95 (355)
T 3vu4_A 60 ------------------------HLSKVRMLHRTNYVAFVTG------------------VKEVVHIWDDVKKQD--VS 95 (355)
T ss_dssp ------------------------CCCEEEECTTSSEEEEECS------------------STTEEEEEETTTTEE--EE
T ss_pred ------------------------CeEEEEEcCCCCEEEEEEC------------------CccEEEEEECCCCcE--EE
Confidence 1366788999988877632 224799999876532 22
Q ss_pred EEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCC
Q 003878 292 CWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDT 371 (789)
Q Consensus 292 ~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~ 371 (789)
.+.. ...+..+.+++++ +++.. ...++++|+.+++.. +..+.. ......+++ .
T Consensus 96 ~~~~---~~~v~~v~~~~~~--~~~~~------~~~i~i~d~~~~~~~------------~~~~~~--~~~~~~~s~--~ 148 (355)
T 3vu4_A 96 RIKV---DAPVKDLFLSREF--IVVSY------GDVISVFKFGNPWKR------------ITDDIR--FGGVCEFSN--G 148 (355)
T ss_dssp EEEC---SSCEEEEEECSSE--EEEEE------TTEEEEEESSTTCCB------------SSCCEE--EEEEEEEET--T
T ss_pred EEEC---CCceEEEEEcCCE--EEEEE------cCEEEEEECCCCcee------------eEEecc--CCceEEEEc--c
Confidence 2332 2235677888765 33332 245899999874111 111111 112233565 5
Q ss_pred EEEEEECCCCCCceEEEEECCCCCC----------------eEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEE-EEE
Q 003878 372 VFTFLTNKDAPKYKIIRVDLKEPND----------------WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYV-LQI 434 (789)
Q Consensus 372 ~l~~~tn~~~~~~~L~~~dl~~~~~----------------~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~-L~~ 434 (789)
.+++.+.. .++.|..+|+.++.. ...+..+. ..+..+++++++.++++...++ . |.+
T Consensus 149 ~la~~sg~--~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~--~~v~~~~~s~~g~~l~s~s~d~--~~v~i 222 (355)
T 3vu4_A 149 LLVYSNEF--NLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHT--NPIKMVRLNRKSDMVATCSQDG--TIIRV 222 (355)
T ss_dssp EEEEEESS--CTTCEEEEECCC------------------CCEEECCCS--SCEEEEEECTTSSEEEEEETTC--SEEEE
T ss_pred EEEEeCCC--cCcEEEEEECCCCCccccccccccccccCcccEEEEccC--CceEEEEECCCCCEEEEEeCCC--CEEEE
Confidence 66665332 346788889876430 23343343 5688999999788888888887 5 889
Q ss_pred EECCCCceeeecc-c-CCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 435 RDLKNGSLLHQLP-I-EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 435 ~dl~tG~~~~~l~-~-~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
||+.+|+.+..+. . ..+.+..++++|+++.++.... -.++..||+..+
T Consensus 223 wd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~----d~~v~iw~~~~~ 272 (355)
T 3vu4_A 223 FKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSD----KWTLHVFEIFND 272 (355)
T ss_dssp EETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEET----TCEEEEEESSCC
T ss_pred EECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEEC----CCEEEEEEccCC
Confidence 9999888767776 2 4567888999999987664332 368999998765
No 351
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.78 E-value=5.8e-06 Score=87.83 Aligned_cols=211 Identities=11% Similarity=0.059 Sum_probs=120.2
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
..+++|+|||+. ++..... ......|++++..+.... .+............+.++|||+.++
T Consensus 89 ~~~i~~~~dg~l-~v~~~~~--------------~~~~~~i~~~d~~~~~~~--~~~~~~~~~~~~~~i~~d~~g~l~v- 150 (333)
T 2dg1_A 89 PAAIKIHKDGRL-FVCYLGD--------------FKSTGGIFAATENGDNLQ--DIIEDLSTAYCIDDMVFDSKGGFYF- 150 (333)
T ss_dssp EEEEEECTTSCE-EEEECTT--------------SSSCCEEEEECTTSCSCE--EEECSSSSCCCEEEEEECTTSCEEE-
T ss_pred cceEEECCCCcE-EEEeCCC--------------CCCCceEEEEeCCCCEEE--EEEccCccCCcccceEECCCCCEEE-
Confidence 467899999974 4443211 011246888887654322 1222111123356789999997544
Q ss_pred EEEcC--CCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCC
Q 003878 317 CIEEN--CDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE 393 (789)
Q Consensus 317 ~~~~~--~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~ 393 (789)
..... ......||.++.+++. ...+..... .....|++||+.+|+.... +..|+++++++
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~--------------~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~i~~~d~~~ 213 (333)
T 2dg1_A 151 TDFRGYSTNPLGGVYYVSPDFRT--------------VTPIIQNISVANGIALSTDEKVLWVTETT---ANRLHRIALED 213 (333)
T ss_dssp EECCCBTTBCCEEEEEECTTSCC--------------EEEEEEEESSEEEEEECTTSSEEEEEEGG---GTEEEEEEECT
T ss_pred EeccccccCCCceEEEEeCCCCE--------------EEEeecCCCcccceEECCCCCEEEEEeCC---CCeEEEEEecC
Confidence 43221 1124679999876532 122222111 1223489999988876543 35799999853
Q ss_pred -CCCeEE----ec-cCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCe------eEEEeecccC
Q 003878 394 -PNDWFE----VI-PEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIG------SVNAISARRE 461 (789)
Q Consensus 394 -~~~~~~----l~-~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~------~v~~~s~s~d 461 (789)
+..... +. .........++.+.+++.+++....++ .|++++.+ |+....+..+.. .+..+.+++|
T Consensus 214 ~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~--~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~d 290 (333)
T 2dg1_A 214 DGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQG--RVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPG 290 (333)
T ss_dssp TSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTT--EEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTT
T ss_pred CCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCC--EEEEECCC-CCEEEEEEcCCCccccccCcceEEECCC
Confidence 221221 11 111113556788887677777665554 78899985 665556655422 3456677788
Q ss_pred CcEEEEEEcCC--CCCcEEEEEECCC
Q 003878 462 DSVVFISFTSF--LIPGIVYQCNLKT 485 (789)
Q Consensus 462 ~~~l~~~~ss~--~~P~~ly~~dl~t 485 (789)
++.|+++...- .....+|++++..
T Consensus 291 g~~L~v~~~~g~~~~~~~l~~~~~~~ 316 (333)
T 2dg1_A 291 TNQLIICSNDIEMGGGSMLYTVNGFA 316 (333)
T ss_dssp SCEEEEEEECGGGTCCEEEEEEECSS
T ss_pred CCEEEEEeCccCCCCCceEEEEeccc
Confidence 88888766542 2356888888653
No 352
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=98.78 E-value=5.5e-08 Score=108.29 Aligned_cols=245 Identities=11% Similarity=0.005 Sum_probs=137.2
Q ss_pred CcEEEEeEEeCC-CCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccc
Q 003878 130 GTAALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYL 208 (789)
Q Consensus 130 ~~~~~~~~~~Sp-Dg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 208 (789)
+...|..++||| ||++|+- |+...+|++||++++.......... ...+.. +.-..|++
T Consensus 163 H~~~V~~l~f~p~~~~~l~s-----~s~D~~v~iwd~~~~~~~~~~~~~~------~~~~~~----~~~~~~~~------ 221 (435)
T 4e54_B 163 AGGSITGLKFNPLNTNQFYA-----SSMEGTTRLQDFKGNILRVFASSDT------INIWFC----SLDVSASS------ 221 (435)
T ss_dssp SSCCCCEEEECSSCTTEEEE-----ECSSSCEEEEETTSCEEEEEECCSS------CSCCCC----CEEEETTT------
T ss_pred CCCCEEEEEEeCCCCCEEEE-----EeCCCEEEEeeccCCceeEEeccCC------CCccEE----EEEECCCC------
Confidence 445678899998 6888762 2334479999998874321110000 000000 11122444
Q ss_pred ccceeeEEEeeeccccceeeeeeec---------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEE
Q 003878 209 RGIFFFFYLFSLVKSTIYSFWSVVS---------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYY 279 (789)
Q Consensus 209 ~~~~~~~~~~~s~~~g~~~l~~~~~---------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 279 (789)
.++++++.+|...+|.+.. .-...+++|+|+++.++++... ...|.+
T Consensus 222 ------~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~------------------d~~v~i 277 (435)
T 4e54_B 222 ------RMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASV------------------DQTVKI 277 (435)
T ss_dssp ------TEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEET------------------TSBCCE
T ss_pred ------CEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecC------------------cceeeE
Confidence 3677888999999998754 1224678999999877766432 234677
Q ss_pred EECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec--
Q 003878 280 HFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-- 357 (789)
Q Consensus 280 ~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-- 357 (789)
|++.+......++.. ..+...+..+.|||||++|+..+.+ ..|.++|+.++.. ...+..
T Consensus 278 wd~~~~~~~~~~~~~-~~h~~~v~~~~~spdg~~l~s~~~D-----~~i~iwd~~~~~~-------------~~~~~~~~ 338 (435)
T 4e54_B 278 WDLRQVRGKASFLYS-LPHRHPVNAACFSPDGARLLTTDQK-----SEIRVYSASQWDC-------------PLGLIPHP 338 (435)
T ss_dssp EETTTCCSSSCCSBC-CBCSSCEEECCBCTTSSEEEEEESS-----SCEEEEESSSSSS-------------EEEECCCC
T ss_pred EecccccccceEEEe-eeccccccceeECCCCCeeEEEcCC-----CEEEEEECCCCcc-------------ceEEeccc
Confidence 888665433222211 1223446688999999999876543 3488889877421 111110
Q ss_pred -----cccceeEEEecCCCEEEEEECCC--------CCCceEEEEECCCCCCeEEeccCCCCceeeeE-EEecCCEEEEE
Q 003878 358 -----GFDAQYEVIANDDTVFTFLTNKD--------APKYKIIRVDLKEPNDWFEVIPEAERDVLESA-TAVNLNQMIVS 423 (789)
Q Consensus 358 -----~~~~~~~~~s~dG~~l~~~tn~~--------~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v-~~~~~~~lv~~ 423 (789)
........|++++..+++....+ .....|..+|..+++....+..+. ...+..+ .+++++.++++
T Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~-~~~v~s~~~fspdg~~las 417 (435)
T 4e54_B 339 HRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPE-SSGISSLNEFNPMGDTLAS 417 (435)
T ss_dssp CCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSS-CCCCCCEEEECTTSSCEEE
T ss_pred ccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCC-CCcEEEEEEECCCCCEEEE
Confidence 00001123666666655543221 122358888988876333343222 2344555 57776667766
Q ss_pred EEeCCeEEEEEEECCCCce
Q 003878 424 YLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 424 ~~~~g~~~L~~~dl~tG~~ 442 (789)
.. ++ .|++|++++|+.
T Consensus 418 g~-d~--~i~iW~~~~gk~ 433 (435)
T 4e54_B 418 AM-GY--HILIWSQQEART 433 (435)
T ss_dssp EC-SS--EEEECCCC----
T ss_pred Ec-CC--cEEEEECCcCee
Confidence 54 44 699999998765
No 353
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=98.78 E-value=3.9e-07 Score=107.93 Aligned_cols=232 Identities=12% Similarity=0.041 Sum_probs=139.5
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLR 209 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 209 (789)
+...+..+++||||++|+-+ +...+|+|||+.++..+.. +... .+. ..+..+.|++
T Consensus 429 h~~~v~~v~~s~~g~~l~sg-----s~Dg~v~vwd~~~~~~~~~-~~~h-------~~~----v~~~~~s~~~------- 484 (694)
T 3dm0_A 429 HSHFVEDVVLSSDGQFALSG-----SWDGELRLWDLAAGVSTRR-FVGH-------TKD----VLSVAFSLDN------- 484 (694)
T ss_dssp CSSCEEEEEECTTSSEEEEE-----ETTSEEEEEETTTTEEEEE-EECC-------SSC----EEEEEECTTS-------
T ss_pred CCCcEEEEEECCCCCEEEEE-----eCCCcEEEEECCCCcceeE-EeCC-------CCC----EEEEEEeCCC-------
Confidence 33457889999999999843 3345899999999865431 1111 110 1122233555
Q ss_pred cceeeEEEeeeccccceeeeeeec-------------ccccceEEEEeCCc--EEEEEEccCCCCCCCCCCCccccCCcc
Q 003878 210 GIFFFFYLFSLVKSTIYSFWSVVS-------------QFKFSSIAWTHDSK--GFFYSRYPAPKEGKDMDAGTETDSNLY 274 (789)
Q Consensus 210 ~~~~~~~~~~s~~~g~~~l~~~~~-------------~~~~~~~~wspDg~--~i~y~~~~~~~~~~~~~~~~~~~~~~~ 274 (789)
+.++++..+|+..||.+.. ......++|+|++. .|+.... .
T Consensus 485 -----~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~-------------------d 540 (694)
T 3dm0_A 485 -----RQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASW-------------------D 540 (694)
T ss_dssp -----SCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEET-------------------T
T ss_pred -----CEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeC-------------------C
Confidence 3577888999999997532 01135689999874 3443322 2
Q ss_pred cEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEe
Q 003878 275 HEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVK 354 (789)
Q Consensus 275 ~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 354 (789)
..|.+|++.+... ...+. .+...+..+.|||||++|+..+.+ ..|.++|+.++. ....
T Consensus 541 ~~v~vwd~~~~~~--~~~~~--~h~~~v~~v~~spdg~~l~sg~~D-----g~i~iwd~~~~~-------------~~~~ 598 (694)
T 3dm0_A 541 KTVKVWNLSNCKL--RSTLA--GHTGYVSTVAVSPDGSLCASGGKD-----GVVLLWDLAEGK-------------KLYS 598 (694)
T ss_dssp SCEEEEETTTCCE--EEEEC--CCSSCEEEEEECTTSSEEEEEETT-----SBCEEEETTTTE-------------EEEC
T ss_pred CeEEEEECCCCcE--EEEEc--CCCCCEEEEEEeCCCCEEEEEeCC-----CeEEEEECCCCc-------------eEEE
Confidence 3588899876432 22222 334457789999999998866543 348888998742 1111
Q ss_pred eeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCC-----------------CCceeeeEEEecC
Q 003878 355 LIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-----------------ERDVLESATAVNL 417 (789)
Q Consensus 355 l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~-----------------~~~~i~~v~~~~~ 417 (789)
+..........|+|++..+...++ ..|..+|+.++.....+..+. ....+.++.|+++
T Consensus 599 ~~~~~~v~~~~~sp~~~~l~~~~~-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spd 673 (694)
T 3dm0_A 599 LEANSVIHALCFSPNRYWLCAATE-----HGIKIWDLESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSAD 673 (694)
T ss_dssp CBCSSCEEEEEECSSSSEEEEEET-----TEEEEEETTTTEEEEEECCCCC----------------CCCCEEEEEECTT
T ss_pred ecCCCcEEEEEEcCCCcEEEEEcC-----CCEEEEECCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCC
Confidence 111111122348998876664332 348888988764222221110 0112567889987
Q ss_pred CEEEEEEEeCCeEEEEEEECC
Q 003878 418 NQMIVSYLSDVKYVLQIRDLK 438 (789)
Q Consensus 418 ~~lv~~~~~~g~~~L~~~dl~ 438 (789)
+..+++...|+ .|++|++.
T Consensus 674 g~~l~sgs~Dg--~i~iW~i~ 692 (694)
T 3dm0_A 674 GSTLFSGYTDG--VIRVWGIG 692 (694)
T ss_dssp SSEEEEEETTS--EEEEEEC-
T ss_pred CCEEEEEcCCC--eEEEEecc
Confidence 88888888888 68888874
No 354
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=98.77 E-value=8.5e-07 Score=95.31 Aligned_cols=251 Identities=13% Similarity=0.068 Sum_probs=137.7
Q ss_pred CCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceec-ccccccccccccCccceeeeeeccccccccccccc
Q 003878 129 DGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLY 207 (789)
Q Consensus 129 ~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 207 (789)
++...+..++|||||++||.+. ...++++||+.++.... ..+... .+. ..+..+.|++
T Consensus 59 ~h~~~v~~~~~sp~g~~l~s~s-----~D~~v~iw~~~~~~~~~~~~~~~h-------~~~----v~~v~~sp~~----- 117 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCGNYLASAS-----FDATTCIWKKNQDDFECVTTLEGH-------ENE----VKSVAWAPSG----- 117 (345)
T ss_dssp SCSSCEEEEEECTTSSEEEEEE-----TTSCEEEEEECCC-EEEEEEECCC-------SSC----EEEEEECTTS-----
T ss_pred ccCCcEEEEEECCCCCEEEEEE-----CCCcEEEEEccCCCeEEEEEccCC-------CCC----ceEEEEeCCC-----
Confidence 3445688999999999998543 23478999988774211 111111 110 1122334666
Q ss_pred cccceeeEEEeeeccccceeeeeeec-------------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcc
Q 003878 208 LRGIFFFFYLFSLVKSTIYSFWSVVS-------------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLY 274 (789)
Q Consensus 208 ~~~~~~~~~~~~s~~~g~~~l~~~~~-------------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~ 274 (789)
.+++++..+|+..||.+.. ......++|+||++.|+....+.
T Consensus 118 -------~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~------------------ 172 (345)
T 3fm0_A 118 -------NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDD------------------ 172 (345)
T ss_dssp -------SEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTS------------------
T ss_pred -------CEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCC------------------
Confidence 4678888999999998753 11235789999999888664432
Q ss_pred cEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCC--CCCCcccccccCCCCcc
Q 003878 275 HEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA--LPEGLEGFKKRDGLLPF 352 (789)
Q Consensus 275 ~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~--g~~~~~~~~~~~~~~~~ 352 (789)
.|.++++.+... ..+.....+...+.+++|+|||++|+..+.++ .|.+++... ......... ....+
T Consensus 173 -~i~~w~~~~~~~--~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~-----~v~iW~~~~~~~~~~~~~~~---~~~~~ 241 (345)
T 3fm0_A 173 -TVKLYREEEDDW--VCCATLEGHESTVWSLAFDPSGQRLASCSDDR-----TVRIWRQYLPGNEQGVACSG---SDPSW 241 (345)
T ss_dssp -CEEEEEEETTEE--EEEEEECCCSSCEEEEEECTTSSEEEEEETTS-----CEEEEEEECTTCTTCCCCC------CEE
T ss_pred -cEEEEEecCCCE--EEEEEecCCCCceEEEEECCCCCEEEEEeCCC-----eEEEeccccCCCCccceeec---cCCcc
Confidence 366666654321 12222223344577899999999998765432 255555422 110000000 00001
Q ss_pred Eee--ecc--cccee-EEEecCCCEEEEEECCCCCCceEEEEECCCCC-----CeEEe--ccCCCCceeeeEEEecCC-E
Q 003878 353 VKL--IDG--FDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-----DWFEV--IPEAERDVLESATAVNLN-Q 419 (789)
Q Consensus 353 ~~l--~~~--~~~~~-~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~-----~~~~l--~~~~~~~~i~~v~~~~~~-~ 419 (789)
..+ ..+ ....+ ..|++++..|+..+.. ..|..++.+... ..... ........+..++|++++ .
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d----~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~ 317 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTGALATACGD----DAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPG 317 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTCCEEEEETT----SCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTT
T ss_pred ceeEEecCCCCCcEEEEEEecCCCEEEEEeCC----CeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCce
Confidence 111 111 11122 3488888877755443 345555544321 01111 111123568889999854 5
Q ss_pred EEEEEEeCCeEEEEEEECCCCce
Q 003878 420 MIVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 420 lv~~~~~~g~~~L~~~dl~tG~~ 442 (789)
++++...|+ .|++|++.+++.
T Consensus 318 ~laS~s~Dg--~v~~W~~~~~~~ 338 (345)
T 3fm0_A 318 LLASCSDDG--EVAFWKYQRPEG 338 (345)
T ss_dssp EEEEEETTS--CEEEEEECC---
T ss_pred EEEEcCCCC--cEEEEEecCCCC
Confidence 888999888 688888876554
No 355
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=98.77 E-value=8.7e-07 Score=106.47 Aligned_cols=222 Identities=11% Similarity=0.050 Sum_probs=146.9
Q ss_pred EEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC
Q 003878 215 FYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT 284 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~ 284 (789)
.+++++..+|.-.||.+.. ......++|+|||+.|+....+ ..|.+|++.+
T Consensus 26 ~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d-------------------g~i~vw~~~~ 86 (814)
T 3mkq_A 26 PWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDD-------------------FRIRVFNYNT 86 (814)
T ss_dssp SEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETT-------------------SEEEEEETTT
T ss_pred CEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCC-------------------CeEEEEECCC
Confidence 3566777889999998654 2224678999999999877432 3588999876
Q ss_pred CCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccc-ee
Q 003878 285 KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-QY 363 (789)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-~~ 363 (789)
+.. ...+.. +...+..+.|+|||++|+.... ...|.++++.++. .....+...... ..
T Consensus 87 ~~~--~~~~~~--~~~~v~~~~~s~~~~~l~~~~~-----dg~i~vw~~~~~~------------~~~~~~~~~~~~v~~ 145 (814)
T 3mkq_A 87 GEK--VVDFEA--HPDYIRSIAVHPTKPYVLSGSD-----DLTVKLWNWENNW------------ALEQTFEGHEHFVMC 145 (814)
T ss_dssp CCE--EEEEEC--CSSCEEEEEECSSSSEEEEEET-----TSEEEEEEGGGTS------------EEEEEEECCSSCEEE
T ss_pred CcE--EEEEec--CCCCEEEEEEeCCCCEEEEEcC-----CCEEEEEECCCCc------------eEEEEEcCCCCcEEE
Confidence 532 223332 3345678999999999886553 3458888887631 111122221111 22
Q ss_pred EEEec-CCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEec--CCEEEEEEEeCCeEEEEEEECCCC
Q 003878 364 EVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVN--LNQMIVSYLSDVKYVLQIRDLKNG 440 (789)
Q Consensus 364 ~~~s~-dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~--~~~lv~~~~~~g~~~L~~~dl~tG 440 (789)
..|+| +|+.|+..+. ++.|..+|+.++.....+..+. ...+..+.+++ ++.++++...++ .|.+||+.++
T Consensus 146 ~~~~p~~~~~l~~~~~----dg~v~vwd~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~~l~~~~~dg--~i~~~d~~~~ 218 (814)
T 3mkq_A 146 VAFNPKDPSTFASGCL----DRTVKVWSLGQSTPNFTLTTGQ-ERGVNYVDYYPLPDKPYMITASDDL--TIKIWDYQTK 218 (814)
T ss_dssp EEEETTEEEEEEEEET----TSEEEEEETTCSSCSEEEECCC-TTCCCEEEECCSTTCCEEEEECTTS--EEEEEETTTT
T ss_pred EEEEcCCCCEEEEEeC----CCeEEEEECCCCcceeEEecCC-CCCEEEEEEEECCCCCEEEEEeCCC--EEEEEECCCC
Confidence 34888 6666665443 3579999997765333333332 24466777776 667777777776 7999999888
Q ss_pred ceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 441 SLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 441 ~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+....+..+.+.+..+.++++++.++... .-+.++.||+.+++
T Consensus 219 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 219 SCVATLEGHMSNVSFAVFHPTLPIIISGS----EDGTLKIWNSSTYK 261 (814)
T ss_dssp EEEEEEECCSSCEEEEEECSSSSEEEEEE----TTSCEEEEETTTCS
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEe----CCCeEEEEECCCCc
Confidence 77666665666788889999998666443 23679999998875
No 356
>2k2q_B Surfactin synthetase thioesterase subunit; A/B-hydrolase, NRPS, non-ribosomal peptide synthetase, type II thioesterase, antibiotic biosynthesis; NMR {Bacillus subtilis} PDB: 2ron_A
Probab=98.75 E-value=7.7e-09 Score=105.24 Aligned_cols=92 Identities=15% Similarity=0.144 Sum_probs=63.4
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHc-CC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA-GY 614 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~-~~ 614 (789)
++.|.||++||..+... .|.. ....|. .+|.|+.+|.||.|.... ...+|+.+.++.+++. +.
T Consensus 11 ~~~~~lv~lhg~g~~~~--~~~~-~~~~L~-~~~~vi~~Dl~GhG~S~~------------~~~~~~~~~~~~~~~~l~~ 74 (242)
T 2k2q_B 11 SEKTQLICFPFAGGYSA--SFRP-LHAFLQ-GECEMLAAEPPGHGTNQT------------SAIEDLEELTDLYKQELNL 74 (242)
T ss_dssp TCCCEEESSCCCCHHHH--HHHH-HHHHHC-CSCCCEEEECCSSCCSCC------------CTTTHHHHHHHHTTTTCCC
T ss_pred CCCceEEEECCCCCCHH--HHHH-HHHhCC-CCeEEEEEeCCCCCCCCC------------CCcCCHHHHHHHHHHHHHh
Confidence 45577899999776532 3333 345565 689999999999875421 1235666666666543 22
Q ss_pred CCCCcEEEEeeChHHHHHHHHHHh------CCCce
Q 003878 615 TQSRKLCIEGGSNGGLLVGACINQ------RPDLF 643 (789)
Q Consensus 615 ~d~~~i~i~G~S~GG~l~~~~~~~------~pd~f 643 (789)
...+++.++|||+||.++..++.+ +|++.
T Consensus 75 ~~~~~~~lvGhSmGG~iA~~~A~~~~~~~~~p~~v 109 (242)
T 2k2q_B 75 RPDRPFVLFGHSMGGMITFRLAQKLEREGIFPQAV 109 (242)
T ss_dssp CCCSSCEEECCSSCCHHHHHHHHHHHHHHCSSCSE
T ss_pred hcCCCEEEEeCCHhHHHHHHHHHHHHHcCCCCCEE
Confidence 223689999999999999998876 67753
No 357
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.75 E-value=5.5e-06 Score=89.75 Aligned_cols=91 Identities=13% Similarity=0.135 Sum_probs=58.9
Q ss_pred EEecCCCEEEEEECCCC-------CCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEEC
Q 003878 365 VIANDDTVFTFLTNKDA-------PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDL 437 (789)
Q Consensus 365 ~~s~dG~~l~~~tn~~~-------~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl 437 (789)
.+++||+++|+....++ ....|.++|+++.+....+ +-. . ..+++++++++.++.... ..|.+||.
T Consensus 260 a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i-~~~--~-p~~ia~spdg~~l~v~n~---~~v~v~D~ 332 (361)
T 2oiz_A 260 GLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARI-PGR--D-ALSMTIDQQRNLMLTLDG---GNVNVYDI 332 (361)
T ss_dssp EEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEE-ECT--T-CCEEEEETTTTEEEEECS---SCEEEEEC
T ss_pred EEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEE-ecC--C-eeEEEECCCCCEEEEeCC---CeEEEEEC
Confidence 57899999998653111 2358999999987633333 332 2 678889886555544443 57999999
Q ss_pred CCC--ceeeecc-cCCeeEEEeecccCCc
Q 003878 438 KNG--SLLHQLP-IEIGSVNAISARREDS 463 (789)
Q Consensus 438 ~tG--~~~~~l~-~~~~~v~~~s~s~d~~ 463 (789)
++| +.+..+. ... .-..+.++|+|.
T Consensus 333 ~t~~l~~~~~i~~~G~-~P~~~~~~p~G~ 360 (361)
T 2oiz_A 333 SQPEPKLLRTIEGAAE-ASLQVQFHPVGG 360 (361)
T ss_dssp SSSSCEEEEEETTSCS-SEEEEEECCCSC
T ss_pred CCCcceeeEEeccCCC-CcEEEEecCCCC
Confidence 999 7766653 222 233566777764
No 358
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=98.75 E-value=1.3e-07 Score=96.86 Aligned_cols=198 Identities=11% Similarity=0.010 Sum_probs=115.4
Q ss_pred cEEEEEcCCCCccCCCCCCHHHHHHHHcCC---eEEEEEeecCCCC--CChhHHh--------cccccCCc------chH
Q 003878 539 PCLLYGYGGFNISVTPSFSVSRTILMRHLG---AVFCIANIRGGGE--YGEEWHK--------GGALAKKQ------NCF 599 (789)
Q Consensus 539 P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G---~~v~~~~~RG~g~--~g~~~~~--------~~~~~~~~------~~~ 599 (789)
+.||++||..+... .|.. ....|.++| +.|+.+++++.|. +...+.. -...++.. ...
T Consensus 5 ~pvv~iHG~~~~~~--~~~~-~~~~L~~~~~~~~~vi~~~v~~~G~~~~~G~~~~~~~~P~i~v~f~~n~~~~~~~~~~a 81 (250)
T 3lp5_A 5 APVIMVPGSSASQN--RFDS-LITELGKETPKKHSVLKLTVQTDGTIKYSGSIAANDNEPFIVIGFANNRDGKANIDKQA 81 (250)
T ss_dssp CCEEEECCCGGGHH--HHHH-HHHHHHHHSSSCCCEEEEEECTTSCEEEEECCCTTCSSCEEEEEESCCCCSHHHHHHHH
T ss_pred CCEEEECCCCCCHH--HHHH-HHHHHHhcCCCCceEEEEEEecCCeEEEeeecCCCCcCCeEEEEeccCCCcccCHHHHH
Confidence 45777999766432 3333 344555466 6778777776553 1111100 00011111 123
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC-----CCceeEEEecCCcccccccccccCCccchhhcCCC
Q 003878 600 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR-----PDLFGCALAHVGVMDMLRYHKFTIGHAWVSDFGCS 674 (789)
Q Consensus 600 ~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~-----pd~f~a~v~~~p~~d~~~~~~~~~~~~~~~e~g~p 674 (789)
+++.+++++|.++- .-+++.++||||||+++..++.++ |+.++.+|+..+..+...... .
T Consensus 82 ~~l~~~~~~l~~~~--~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p~~g~~~~~-------------~ 146 (250)
T 3lp5_A 82 VWLNTAFKALVKTY--HFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASPYNMESTST-------------T 146 (250)
T ss_dssp HHHHHHHHHHHTTS--CCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCCTTTTCCCS-------------S
T ss_pred HHHHHHHHHHHHHc--CCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCCCCcccccc-------------c
Confidence 67777888887662 336899999999999999988876 677888887766444321100 0
Q ss_pred CcHHHHHHHHhcCcccCCCCCCCCCCCCCCCCCeEEEEecC----CCCCCCcHHHHHHHHHHHHhhccCCCCCCCCCcEE
Q 003878 675 EEEEEFYWLIKYSPLHNVRRPWEQNPDKPFQYPSTLLLTAD----HDDRVVPLHSLKLLATMQYVLCTSLENSPQTNPII 750 (789)
Q Consensus 675 ~~~~~~~~l~~~sP~~~v~~~~~~~~~~~~~~pp~Li~~g~----~D~~V~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 750 (789)
.....++.|.+..+ .+.. ..|+|+++|. +|..||+..+..+...++.. .....
T Consensus 147 ~~~~~~~~l~~~~~--~lp~-----------~vpvl~I~G~~~~~~Dg~Vp~~sa~~l~~l~~~~----------~~~~~ 203 (250)
T 3lp5_A 147 AKTSMFKELYRYRT--GLPE-----------SLTVYSIAGTENYTSDGTVPYNSVNYGKYIFQDQ----------VKHFT 203 (250)
T ss_dssp CCCHHHHHHHHTGG--GSCT-----------TCEEEEEECCCCCCTTTBCCHHHHTTHHHHHTTT----------SSEEE
T ss_pred ccCHHHHHHHhccc--cCCC-----------CceEEEEEecCCCCCCceeeHHHHHHHHHHhccc----------ccceE
Confidence 11123444443211 1111 4699999999 89999998887776666543 23333
Q ss_pred EEEeC--CCCcCCCCchhhHHHHHHHHHHHHH
Q 003878 751 GRIER--KAGHGVGLPTQKMIDEAADRYGFMA 780 (789)
Q Consensus 751 l~~~~--~~gH~~~~~~~~~~~~~~~~~~fl~ 780 (789)
...+. +++|...-.. -+..+.+.+||.
T Consensus 204 ~~~v~g~~a~H~~l~e~---~~v~~~I~~FL~ 232 (250)
T 3lp5_A 204 EITVTGANTAHSDLPQN---KQIVSLIRQYLL 232 (250)
T ss_dssp EEECTTTTBSSCCHHHH---HHHHHHHHHHTS
T ss_pred EEEEeCCCCchhcchhC---HHHHHHHHHHHh
Confidence 33343 4679874322 245667777775
No 359
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=98.74 E-value=2.5e-06 Score=93.54 Aligned_cols=198 Identities=8% Similarity=-0.020 Sum_probs=127.1
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|+|||+.|+....+ ..|.+|++.+... ...+.. +...+..+.| +++.++.
T Consensus 137 v~~v~~s~~~~~l~~~~~d-------------------g~i~iwd~~~~~~--~~~~~~--~~~~v~~~~~--~~~~l~~ 191 (401)
T 4aez_A 137 VASVKWSHDGSFLSVGLGN-------------------GLVDIYDVESQTK--LRTMAG--HQARVGCLSW--NRHVLSS 191 (401)
T ss_dssp EEEEEECTTSSEEEEEETT-------------------SCEEEEETTTCCE--EEEECC--CSSCEEEEEE--ETTEEEE
T ss_pred EEEEEECCCCCEEEEECCC-------------------CeEEEEECcCCeE--EEEecC--CCCceEEEEE--CCCEEEE
Confidence 5789999999999877543 2488888876532 223332 3334556777 5677765
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce-eEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
... ...|+++|+.... .....+....... ...|+|+|+.|+..+. +..|..+|+.++.
T Consensus 192 ~~~-----dg~i~i~d~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~----d~~v~iwd~~~~~ 250 (401)
T 4aez_A 192 GSR-----SGAIHHHDVRIAN------------HQIGTLQGHSSEVCGLAWRSDGLQLASGGN----DNVVQIWDARSSI 250 (401)
T ss_dssp EET-----TSEEEEEETTSSS------------CEEEEEECCSSCEEEEEECTTSSEEEEEET----TSCEEEEETTCSS
T ss_pred EcC-----CCCEEEEecccCc------------ceeeEEcCCCCCeeEEEEcCCCCEEEEEeC----CCeEEEccCCCCC
Confidence 542 3568999987521 1122222222212 2348999998876554 3579999998876
Q ss_pred CeEEeccCCCCceeeeEEEecC-CEEEEEEE--eCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCC
Q 003878 396 DWFEVIPEAERDVLESATAVNL-NQMIVSYL--SDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSF 472 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~~-~~lv~~~~--~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~ 472 (789)
....+..+. ..+..+.++++ ..++++.. .++ .|++||+.+++....+.. ...+..+.++++++.++.+..+
T Consensus 251 ~~~~~~~~~--~~v~~~~~~p~~~~ll~~~~gs~d~--~i~i~d~~~~~~~~~~~~-~~~v~~~~~s~~~~~l~~~~g~- 324 (401)
T 4aez_A 251 PKFTKTNHN--AAVKAVAWCPWQSNLLATGGGTMDK--QIHFWNAATGARVNTVDA-GSQVTSLIWSPHSKEIMSTHGF- 324 (401)
T ss_dssp EEEEECCCS--SCCCEEEECTTSTTEEEEECCTTTC--EEEEEETTTCCEEEEEEC-SSCEEEEEECSSSSEEEEEECT-
T ss_pred ccEEecCCc--ceEEEEEECCCCCCEEEEecCCCCC--EEEEEECCCCCEEEEEeC-CCcEEEEEECCCCCeEEEEeec-
Confidence 333343333 56788999884 45666654 344 799999998877565543 3457788999999987765422
Q ss_pred CCCcEEEEEECCCCC
Q 003878 473 LIPGIVYQCNLKTET 487 (789)
Q Consensus 473 ~~P~~ly~~dl~tg~ 487 (789)
.-+.++.||+.+++
T Consensus 325 -~dg~i~v~~~~~~~ 338 (401)
T 4aez_A 325 -PDNNLSIWSYSSSG 338 (401)
T ss_dssp -TTCEEEEEEEETTE
T ss_pred -CCCcEEEEecCCcc
Confidence 34688999988763
No 360
>1dx4_A ACHE, acetylcholinesterase; hydrolase, serine esterase, synapse, membrane, nerve, muscle neurotransmitter degradation, glycoprotein; HET: NAG MAN BMA 760; 2.70A {Drosophila melanogaster} SCOP: c.69.1.1 PDB: 1qo9_A* 1qon_A*
Probab=98.74 E-value=1.6e-08 Score=116.62 Aligned_cols=117 Identities=18% Similarity=0.143 Sum_probs=80.7
Q ss_pred CCCccEEEEEcCCCCccCC---CCCCHHHHHHHHcCCeEEEEEeecCC-CCCCh---hHHh-cccccCCcchHHHHHHHH
Q 003878 535 DGSHPCLLYGYGGFNISVT---PSFSVSRTILMRHLGAVFCIANIRGG-GEYGE---EWHK-GGALAKKQNCFDDFISAS 606 (789)
Q Consensus 535 ~~~~P~ll~~hGg~~~~~~---~~~~~~~~~~l~~~G~~v~~~~~RG~-g~~g~---~~~~-~~~~~~~~~~~~D~~~~~ 606 (789)
.++.|+||++|||...... ..+.. ..++++.|++|+.+|||-| -+|.. .... ......+...+.|.++++
T Consensus 138 ~~~~PV~v~iHGGg~~~g~~~~~~~~~--~~l~~~~~~vvv~~nYRlg~~Gfl~~~~~~~~~~~~~~~~n~gl~D~~~al 215 (585)
T 1dx4_A 138 TNGLPILIWIYGGGFMTGSATLDIYNA--DIMAAVGNVIVASFQYRVGAFGFLHLAPEMPSEFAEEAPGNVGLWDQALAI 215 (585)
T ss_dssp CSSEEEEEEECCSTTTCCCTTCGGGCC--HHHHHHHTCEEEEECCCCTHHHHCCCGGGSCGGGTTSSCSCHHHHHHHHHH
T ss_pred CCCCCEEEEECCCcccCCCCCCCCCCc--hhhhccCCEEEEEecccccchhhcccccccccccCCCCCCcccHHHHHHHH
Confidence 4678999999998543333 23333 2344447999999999942 12211 1100 111122344589999999
Q ss_pred HHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhC--CCceeEEEecCCcc
Q 003878 607 EYLISAG---YTQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVM 653 (789)
Q Consensus 607 ~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~--pd~f~a~v~~~p~~ 653 (789)
+|+.++- ..||+||.|+|+|+||.+++.++... ..+|+++|+++|..
T Consensus 216 ~wv~~ni~~fggDp~~vti~G~SaGg~~v~~~~~~~~~~~lf~~ai~~Sg~~ 267 (585)
T 1dx4_A 216 RWLKDNAHAFGGNPEWMTLFGESAGSSSVNAQLMSPVTRGLVKRGMMQSGTM 267 (585)
T ss_dssp HHHHHSTGGGTEEEEEEEEEEETHHHHHHHHHHHCTTTTTSCCEEEEESCCT
T ss_pred HHHHHHHHHhCCCcceeEEeecchHHHHHHHHHhCCcccchhHhhhhhcccc
Confidence 9999872 35999999999999999998887752 36999999998864
No 361
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=98.73 E-value=1e-06 Score=93.50 Aligned_cols=224 Identities=9% Similarity=0.036 Sum_probs=138.6
Q ss_pred EEEEeEEeCCCCc-EEEEEEecCCceEEEEEEEEc-CCCceecccccc--cccccccCccceeeeeeccccccccccccc
Q 003878 132 AALIKVSVSEDAK-YLAYALSYSGSDWATIKLMRI-EDQIVEADALSW--VCFCFSHSFGYFFHLTISLLNVPTYKLFLY 207 (789)
Q Consensus 132 ~~~~~~~~SpDg~-~la~~~~~~g~~~~~i~v~dl-~tg~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 207 (789)
..+..+.++|||+ +|+.+.. . ..|++||+ .+++... +.. . .+
T Consensus 57 ~~v~~~~~~~~~~~~l~~~~~-d----g~i~~wd~~~~~~~~~--~~~~~~-------~~-------------------- 102 (342)
T 1yfq_A 57 HPLLCCNFIDNTDLQIYVGTV-Q----GEILKVDLIGSPSFQA--LTNNEA-------NL-------------------- 102 (342)
T ss_dssp SCEEEEEEEESSSEEEEEEET-T----SCEEEECSSSSSSEEE--CBSCCC-------CS--------------------
T ss_pred CceEEEEECCCCCcEEEEEcC-C----CeEEEEEeccCCceEe--ccccCC-------CC--------------------
Confidence 3478899999999 8875442 3 37999999 8885432 111 1 00
Q ss_pred cccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC---
Q 003878 208 LRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT--- 284 (789)
Q Consensus 208 ~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~--- 284 (789)
....++|+| ++.|+....+ ..|++|++.+
T Consensus 103 ----------------------------~v~~l~~~~-~~~l~s~~~d-------------------~~i~iwd~~~~~~ 134 (342)
T 1yfq_A 103 ----------------------------GICRICKYG-DDKLIAASWD-------------------GLIEVIDPRNYGD 134 (342)
T ss_dssp ----------------------------CEEEEEEET-TTEEEEEETT-------------------SEEEEECHHHHTT
T ss_pred ----------------------------ceEEEEeCC-CCEEEEEcCC-------------------CeEEEEccccccc
Confidence 246899999 8888765432 3577777654
Q ss_pred ------CCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCC-CCCCcccccccCCCCccEeeec
Q 003878 285 ------KQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA-LPEGLEGFKKRDGLLPFVKLID 357 (789)
Q Consensus 285 ------~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~l~~ 357 (789)
..... .+. +...+..+.++|++ ++.... ...|+++|+.+ +.. .......
T Consensus 135 ~~~~~~~~~~~--~~~---~~~~v~~~~~~~~~--l~~~~~-----d~~i~i~d~~~~~~~------------~~~~~~~ 190 (342)
T 1yfq_A 135 GVIAVKNLNSN--NTK---VKNKIFTMDTNSSR--LIVGMN-----NSQVQWFRLPLCEDD------------NGTIEES 190 (342)
T ss_dssp BCEEEEESCSS--SSS---SCCCEEEEEECSSE--EEEEES-----TTEEEEEESSCCTTC------------CCEEEEC
T ss_pred ccccccCCeee--EEe---eCCceEEEEecCCc--EEEEeC-----CCeEEEEECCccccc------------cceeeec
Confidence 21111 111 23346688999988 444432 34689999886 421 1111111
Q ss_pred --cccceeEEEec-CCCEEEEEECCCCCCceEEEEECCCC------CCeEEeccCCC-------CceeeeEEEecCCEEE
Q 003878 358 --GFDAQYEVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEP------NDWFEVIPEAE-------RDVLESATAVNLNQMI 421 (789)
Q Consensus 358 --~~~~~~~~~s~-dG~~l~~~tn~~~~~~~L~~~dl~~~------~~~~~l~~~~~-------~~~i~~v~~~~~~~lv 421 (789)
........|+| +|+.++..+. ++.|..++++.. .....+..+.. ...+..+.+++++.++
T Consensus 191 ~~~~~i~~i~~~~~~~~~l~~~~~----dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l 266 (342)
T 1yfq_A 191 GLKYQIRDVALLPKEQEGYACSSI----DGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFL 266 (342)
T ss_dssp SCSSCEEEEEECSGGGCEEEEEET----TSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCE
T ss_pred CCCCceeEEEECCCCCCEEEEEec----CCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEE
Confidence 11112234889 9988776554 356777776554 32333333321 1267889999877777
Q ss_pred EEEEeCCeEEEEEEECCCCceeeecccC-CeeEEEeecccCCcEEEEEE
Q 003878 422 VSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISF 469 (789)
Q Consensus 422 ~~~~~~g~~~L~~~dl~tG~~~~~l~~~-~~~v~~~s~s~d~~~l~~~~ 469 (789)
++...++ .|++||+.+++.+..+... ...+..+. ++++.++...
T Consensus 267 ~~~~~dg--~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~~~l~s~s 311 (342)
T 1yfq_A 267 YTAGSDG--IISCWNLQTRKKIKNFAKFNEDSVVKIA--CSDNILCLAT 311 (342)
T ss_dssp EEEETTS--CEEEEETTTTEEEEECCCCSSSEEEEEE--ECSSEEEEEE
T ss_pred EEecCCc--eEEEEcCccHhHhhhhhcccCCCceEec--CCCCeEEEEe
Confidence 7788777 6899999988876777665 66777777 7888666543
No 362
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=98.73 E-value=1.9e-08 Score=111.78 Aligned_cols=113 Identities=11% Similarity=-0.018 Sum_probs=79.1
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHH-HHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSR-TILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGY 614 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~ 614 (789)
...|+||++||..+.. ...|.... ..+++..||.|+++|+||.|.... ... ...-....+|+.+.+++|.++.-
T Consensus 68 ~~~~~vvllHG~~~s~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~g~s~~--~~~--~~~~~~~~~dl~~~i~~l~~~~g 142 (432)
T 1gpl_A 68 LNRKTRFIIHGFTDSG-ENSWLSDMCKNMFQVEKVNCICVDWKGGSKAQY--SQA--SQNIRVVGAEVAYLVQVLSTSLN 142 (432)
T ss_dssp TTSEEEEEECCTTCCT-TSHHHHHHHHHHHHHCCEEEEEEECHHHHTSCH--HHH--HHHHHHHHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEEECCCCCCC-CchHHHHHHHHHHhcCCcEEEEEECccccCccc--hhh--HhhHHHHHHHHHHHHHHHHHhcC
Confidence 4578999999976553 22343322 334333699999999999765431 111 01112234678888888875533
Q ss_pred CCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 615 TQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 615 ~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
++.+++.++|||+||.+++.++.++|++++++++..|..
T Consensus 143 ~~~~~i~lvGhSlGg~vA~~~a~~~p~~v~~iv~l~pa~ 181 (432)
T 1gpl_A 143 YAPENVHIIGHSLGAHTAGEAGKRLNGLVGRITGLDPAE 181 (432)
T ss_dssp CCGGGEEEEEETHHHHHHHHHHHTTTTCSSEEEEESCBC
T ss_pred CCcccEEEEEeCHHHHHHHHHHHhcccccceeEEecccc
Confidence 467899999999999999999999999999998877643
No 363
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.73 E-value=1.2e-06 Score=97.13 Aligned_cols=206 Identities=12% Similarity=0.058 Sum_probs=122.8
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCc-----EEEEecCCCCeeEEEEEEecCC
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSED-----ILCWKDPEHPKYIFSGHVTEDG 311 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~-----~~~~~~~~~~~~~~~~~~SpDG 311 (789)
...++|+|+++.++++.. ....|.+|++.+..... ...+. .+...+..+.|+|++
T Consensus 184 v~~l~~~~~~~~~l~s~~------------------~dg~i~vwd~~~~~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~ 243 (430)
T 2xyi_A 184 GYGLSWNPNLNGYLLSAS------------------DDHTICLWDINATPKEHRVIDAKNIFT--GHTAVVEDVAWHLLH 243 (430)
T ss_dssp CCCEEECTTSTTEEEEEC------------------TTSCEEEEETTSCCBGGGEEECSEEEC--CCSSCEEEEEECSSC
T ss_pred eEEEEeCCCCCCeEEEEe------------------CCCeEEEEeCCCCCCCCceeccceeec--CCCCCEeeeEEeCCC
Confidence 478999999984444422 22348888887643221 12222 233446789999965
Q ss_pred cEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc-cceeEEEecCCCEEEEEECCCCCCceEEEEE
Q 003878 312 QYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVD 390 (789)
Q Consensus 312 ~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~d 390 (789)
..+++.... ...|+++|+.++.. ..+...+.... ......|+|+++.+++.... ++.|..+|
T Consensus 244 ~~~l~s~~~----dg~i~i~d~~~~~~----------~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~---dg~v~vwd 306 (430)
T 2xyi_A 244 ESLFGSVAD----DQKLMIWDTRNNNT----------SKPSHTVDAHTAEVNCLSFNPYSEFILATGSA---DKTVALWD 306 (430)
T ss_dssp TTEEEEEET----TSEEEEEETTCSCS----------SSCSEEEECCSSCEEEEEECSSCTTEEEEEET---TSEEEEEE
T ss_pred CCEEEEEeC----CCeEEEEECCCCCC----------CcceeEeecCCCCeEEEEeCCCCCCEEEEEeC---CCeEEEEe
Confidence 555554432 35699999987420 11222222211 11223489998876655543 36799999
Q ss_pred CCCCC-CeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCeEEEEEEECCCC--------------ceeeecccCCeeEE
Q 003878 391 LKEPN-DWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDLKNG--------------SLLHQLPIEIGSVN 454 (789)
Q Consensus 391 l~~~~-~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~~~L~~~dl~tG--------------~~~~~l~~~~~~v~ 454 (789)
+.... ....+..+. ..+..+.|++++ .++++...++ .|.+||+... +.+..+......+.
T Consensus 307 ~~~~~~~~~~~~~h~--~~v~~i~~sp~~~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~ 382 (430)
T 2xyi_A 307 LRNLKLKLHSFESHK--DEIFQVQWSPHNETILASSGTDR--RLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKIS 382 (430)
T ss_dssp TTCTTSCSEEEECCS--SCEEEEEECSSCTTEEEEEETTS--CCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEE
T ss_pred CCCCCCCeEEeecCC--CCEEEEEECCCCCCEEEEEeCCC--cEEEEeCCCCccccCccccccCCcceEEEcCCCCCCce
Confidence 98743 234443343 567889999854 5788888776 6888998642 11122222345578
Q ss_pred EeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 455 AISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 455 ~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
.+.++++++.++++.+ .-+.+..|++..+
T Consensus 383 ~~~~~p~~~~~l~s~s---~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 383 DFSWNPNEPWIICSVS---EDNIMQVWQMAEN 411 (430)
T ss_dssp EEEECSSSTTEEEEEE---TTSEEEEEEECHH
T ss_pred EEEECCCCCCEEEEEE---CCCCEEEeEcccc
Confidence 8899999884554443 2367788877543
No 364
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=98.73 E-value=1.5e-06 Score=92.72 Aligned_cols=204 Identities=11% Similarity=0.021 Sum_probs=111.1
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC---CcEEEEecCCCCeeEEEEEEecCCcE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS---EDILCWKDPEHPKYIFSGHVTEDGQY 313 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~---~~~~~~~~~~~~~~~~~~~~SpDG~~ 313 (789)
...++|+|||+.|+....+ ..|.+|++..... ....+.....+...+..++|+|||++
T Consensus 61 v~~v~~sp~~~~las~s~D-------------------~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~ 121 (330)
T 2hes_X 61 IRSVAWRPHTSLLAAGSFD-------------------STVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYY 121 (330)
T ss_dssp EEEEEECTTSSEEEEEETT-------------------SCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCE
T ss_pred EEEEEECCCCCEEEEEeCC-------------------CcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCE
Confidence 4789999999988866433 2477777743211 11122222223344678999999999
Q ss_pred EEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce-eEEEecCCCEEEEEECCCCCCceEEEEECC
Q 003878 314 LVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLK 392 (789)
Q Consensus 314 l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~ 392 (789)
|+..+.+ ..|.++|+...... ......+....... ...|+|+++.|+..+. +..|..+++.
T Consensus 122 las~s~D-----~~v~iwd~~~~~~~---------~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~----D~~i~iW~~~ 183 (330)
T 2hes_X 122 LATCSRD-----KSVWIWETDESGEE---------YECISVLQEHSQDVKHVIWHPSEALLASSSY----DDTVRIWKDY 183 (330)
T ss_dssp EEEEETT-----SCEEEEECCTTCCC---------CEEEEEECCCSSCEEEEEECSSSSEEEEEET----TSCEEEEEEE
T ss_pred EEEEeCC-----CEEEEEeccCCCCC---------eEEEEEeccCCCceEEEEECCCCCEEEEEcC----CCeEEEEECC
Confidence 8866543 34888888532100 01111122211112 2348999987765443 2456666665
Q ss_pred CCC--CeEEeccCCCCceeeeEEEecC--CEEEEEEEeCCeEEEEEEECCCCc--------eeeeccc-CCeeEEEeecc
Q 003878 393 EPN--DWFEVIPEAERDVLESATAVNL--NQMIVSYLSDVKYVLQIRDLKNGS--------LLHQLPI-EIGSVNAISAR 459 (789)
Q Consensus 393 ~~~--~~~~l~~~~~~~~i~~v~~~~~--~~lv~~~~~~g~~~L~~~dl~tG~--------~~~~l~~-~~~~v~~~s~s 459 (789)
++. ....+..+. ..+..+.++++ ...+++...++ .|.+|++.++. ....+.. +...+..++++
T Consensus 184 ~~~~~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~s~D~--~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s 259 (330)
T 2hes_X 184 DDDWECVAVLNGHE--GTVWSSDFDKTEGVFRLCSGSDDS--TVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWG 259 (330)
T ss_dssp TTEEEEEEEECCCS--SCEEEEEECCSSSSCEEEEEETTS--CEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEEC
T ss_pred CCCeeEEEEccCCC--CcEEEEEecCCCCeeEEEEEeCCC--eEEEEEecCCCccccceeEEeeecccccccceEEEEEc
Confidence 442 122333333 45778888874 45677888887 57777765331 1122222 34557777777
Q ss_pred cCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 460 REDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 460 ~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
+++ . +++.+ .-+.+..||..++
T Consensus 260 ~~~-~-l~s~~---~dg~v~iw~~~~~ 281 (330)
T 2hes_X 260 FNG-L-IASVG---ADGVLAVYEEVDG 281 (330)
T ss_dssp TTS-C-EEEEE---TTSCEEEEEEETT
T ss_pred CCC-E-EEEEe---CCCEEEEEEcCCC
Confidence 554 2 33332 2457788887766
No 365
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.73 E-value=2.5e-06 Score=92.49 Aligned_cols=68 Identities=12% Similarity=0.091 Sum_probs=49.8
Q ss_pred EEEecC-CEEEEEEEeCC--------eEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEE
Q 003878 412 ATAVNL-NQMIVSYLSDV--------KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCN 482 (789)
Q Consensus 412 v~~~~~-~~lv~~~~~~g--------~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~d 482 (789)
++++++ +++|+....++ ...|++||+++++.+..+..+. ..++.++||++.++.+ + . .++..||
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~-n---~-~~v~v~D 331 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTL-D---G-GNVNVYD 331 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEE-C---S-SCEEEEE
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEe-C---C-CeEEEEE
Confidence 566665 66776554222 3489999999998877777655 5678899999976643 2 2 8999999
Q ss_pred CCCC
Q 003878 483 LKTE 486 (789)
Q Consensus 483 l~tg 486 (789)
.+++
T Consensus 332 ~~t~ 335 (361)
T 2oiz_A 332 ISQP 335 (361)
T ss_dssp CSSS
T ss_pred CCCC
Confidence 9998
No 366
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.71 E-value=2.6e-07 Score=110.54 Aligned_cols=248 Identities=14% Similarity=0.014 Sum_probs=149.6
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceec-ccccccccccccCccceeeeeecccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYL 208 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 208 (789)
+...+..+++||||++|+.+.. ..+|+|||+.++.... ..+... .+
T Consensus 8 H~~~V~~l~~s~dg~~latg~~-----dg~I~vwd~~~~~~~~~~~l~~h-------~~--------------------- 54 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSS-----DKTIKIFEVEGETHKLIDTLTGH-------EG--------------------- 54 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEET-----TTEEEEEEEETTEEEEEEEECCC-------SS---------------------
T ss_pred CcceeEEEEECCCCCeEEEEEC-----CCcEEEEecCCCCCccceeccCC-------cC---------------------
Confidence 4456788999999999885532 3479999998543211 111111 00
Q ss_pred ccceeeEEEeeeccccceeeeeeecccccceEEEEeC--CcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCC
Q 003878 209 RGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHD--SKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ 286 (789)
Q Consensus 209 ~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspD--g~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~ 286 (789)
....++|+|+ |+.|+....+ ..|++|++.++.
T Consensus 55 ---------------------------~V~~l~~s~~~~~~~l~s~s~D-------------------g~I~vwd~~~~~ 88 (753)
T 3jro_A 55 ---------------------------PVWRVDWAHPKFGTILASCSYD-------------------GKVLIWKEENGR 88 (753)
T ss_dssp ---------------------------CEEEEEECCTTSCSEEEEEETT-------------------SCEEEEEEETTE
T ss_pred ---------------------------ceEEEEecCCCCCCEEEEEeCC-------------------CeEEEEECCCCc
Confidence 2578999998 8888766443 248888887643
Q ss_pred CCcEEEEecCCCCeeEEEEEEecC--CcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce-e
Q 003878 287 SEDILCWKDPEHPKYIFSGHVTED--GQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-Y 363 (789)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-~ 363 (789)
......+. .+...+..+.|+|+ |+.++..+. ...|.++|+.++.. .....+....... .
T Consensus 89 ~~~~~~~~--~h~~~V~~v~~sp~~~~~~l~sgs~-----dg~I~vwdl~~~~~-----------~~~~~~~~~~~~v~~ 150 (753)
T 3jro_A 89 WSQIAVHA--VHSASVNSVQWAPHEYGPLLLVASS-----DGKVSVVEFKENGT-----------TSPIIIDAHAIGVNS 150 (753)
T ss_dssp EEEEEEEC--CCSSCEEEEEECCGGGCSEEEEEET-----TSEEEEEECCSSSC-----------CCCEEEECCSSCEEE
T ss_pred cccccccc--CCCCCeEEEEECCCCCCCEEEEEeC-----CCcEEEEEeecCCC-----------cceeEeecCCCceEE
Confidence 22222222 23445678999999 898887653 35688999887421 1111121111111 2
Q ss_pred EEEec-------------CCCEEEEEECCCCCCceEEEEECCCCCC-e---EEeccCCCCceeeeEEEecC---CEEEEE
Q 003878 364 EVIAN-------------DDTVFTFLTNKDAPKYKIIRVDLKEPND-W---FEVIPEAERDVLESATAVNL---NQMIVS 423 (789)
Q Consensus 364 ~~~s~-------------dG~~l~~~tn~~~~~~~L~~~dl~~~~~-~---~~l~~~~~~~~i~~v~~~~~---~~lv~~ 423 (789)
..|+| +|+.++..+. ++.|..+|+.++.. + ..+..+ ...+..+.++++ +.++++
T Consensus 151 l~~~p~~~~~~~~~~~~~d~~~l~sgs~----dg~I~iwd~~~~~~~~~~~~~~~~h--~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 151 ASWAPATIEEDGEHNGTKESRKFVTGGA----DNLVKIWKYNSDAQTYVLESTLEGH--SDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp EEECCCC---------CGGGCCEEEEET----TSCEEEEEEETTTTEEEEEEEECCC--SSCEEEEEECCCCSSSEEEEE
T ss_pred EEecCcccccccccccCCCCCEEEEEEC----CCeEEEEeccCCcccceeeeeecCC--CCcEEEEEeccCCCCCCEEEE
Confidence 33666 5776665443 35677788766531 1 222223 356888999987 688888
Q ss_pred EEeCCeEEEEEEECCCCcee--ee-ccc--CCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 424 YLSDVKYVLQIRDLKNGSLL--HQ-LPI--EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 424 ~~~~g~~~L~~~dl~tG~~~--~~-l~~--~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
...++ .|++||+.+++.. .. ... ..+.+..+.++++++.++... .-+.++.|++.++
T Consensus 225 ~s~Dg--~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s----~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 225 VSQDR--TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG----GDNKVTLWKENLE 286 (753)
T ss_dssp EESSS--CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEEC----SSSCEECCBCCSS
T ss_pred EecCC--EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEc----CCCEEEEEecCCC
Confidence 88887 6888898765321 11 111 244566778899988665432 2457888887643
No 367
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.70 E-value=2.1e-05 Score=85.16 Aligned_cols=110 Identities=11% Similarity=0.176 Sum_probs=69.5
Q ss_pred cCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCC------------CCceeeeEEEecC-CEEEEEEEeC-------
Q 003878 368 NDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA------------ERDVLESATAVNL-NQMIVSYLSD------- 427 (789)
Q Consensus 368 ~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~------------~~~~i~~v~~~~~-~~lv~~~~~~------- 427 (789)
++| +++|.+. .++|+.+|+.+.. .+ ++... .....+.+.++++ +++|+....+
T Consensus 236 ~dG-~~~~vs~----~g~V~v~d~~~~~-~~-v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~ 308 (386)
T 3sjl_D 236 KAG-RLVWPTY----TGKIHQIDLSSGD-AK-FLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKT 308 (386)
T ss_dssp TTT-EEEEEBT----TSEEEEEECTTSS-CE-ECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTS
T ss_pred CCC-cEEEEeC----CCEEEEEECCCCc-ce-eecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCC
Confidence 566 4555555 2579999987654 11 11100 0011234566653 6787766542
Q ss_pred CeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 428 VKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 428 g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
...+|+++|+++++.++.+..+. .+.++.+++|++.++|..+ ..-..+..+|..+++
T Consensus 309 ~~~~V~viD~~t~kv~~~i~vg~-~~~~lavs~D~~~~ly~tn--~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 309 ASRFVVVLDAKTGERLAKFEMGH-EIDSINVSQDEKPLLYALS--TGDKTLYIHDAESGE 365 (386)
T ss_dssp CEEEEEEEETTTCCEEEEEEEEE-EECEEEECSSSSCEEEEEE--TTTTEEEEEETTTCC
T ss_pred CCCEEEEEECCCCeEEEEEECCC-CcceEEECCCCCeEEEEEc--CCCCeEEEEECCCCc
Confidence 24699999999999888887653 3446788999974444433 235689999999986
No 368
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=98.69 E-value=4e-06 Score=90.40 Aligned_cols=222 Identities=9% Similarity=0.008 Sum_probs=141.4
Q ss_pred EEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC
Q 003878 215 FYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT 284 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~ 284 (789)
++++++..+|+..||.... ......++|+|||+.|+.... ...+.++++..
T Consensus 77 ~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~-------------------d~~i~v~~~~~ 137 (354)
T 2pbi_B 77 RRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGL-------------------DNKCSVYPLTF 137 (354)
T ss_dssp SEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEEST-------------------TSEEEEEECCC
T ss_pred CEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeC-------------------CCCEEEEEEec
Confidence 4788899999999997543 112357899999998886522 23466666654
Q ss_pred CCC----CcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc
Q 003878 285 KQS----EDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD 360 (789)
Q Consensus 285 ~~~----~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~ 360 (789)
... .....+.. +...+..+.|+|++++|+..+. ...|.++|+.++. ....+.....
T Consensus 138 ~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~t~s~-----D~~v~lwd~~~~~-------------~~~~~~~h~~ 197 (354)
T 2pbi_B 138 DKNENMAAKKKSVAM--HTNYLSACSFTNSDMQILTASG-----DGTCALWDVESGQ-------------LLQSFHGHGA 197 (354)
T ss_dssp CTTCCSGGGCEEEEE--CSSCEEEEEECSSSSEEEEEET-----TSEEEEEETTTCC-------------EEEEEECCSS
T ss_pred cccccccccceeeec--cCCcEEEEEEeCCCCEEEEEeC-----CCcEEEEeCCCCe-------------EEEEEcCCCC
Confidence 321 11122222 2334668899999999886553 3458899998742 1222222111
Q ss_pred cee-EEEec--CCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEEC
Q 003878 361 AQY-EVIAN--DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDL 437 (789)
Q Consensus 361 ~~~-~~~s~--dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl 437 (789)
... ..+++ +|+.|+..+ .++.|..+|+.+++....+..+. ..+..+.+++++.++++...++ .|++||+
T Consensus 198 ~v~~~~~~~~~~g~~l~sgs----~Dg~v~~wd~~~~~~~~~~~~h~--~~v~~v~~~p~~~~l~s~s~D~--~v~lwd~ 269 (354)
T 2pbi_B 198 DVLCLDLAPSETGNTFVSGG----CDKKAMVWDMRSGQCVQAFETHE--SDVNSVRYYPSGDAFASGSDDA--TCRLYDL 269 (354)
T ss_dssp CEEEEEECCCSSCCEEEEEE----TTSCEEEEETTTCCEEEEECCCS--SCEEEEEECTTSSEEEEEETTS--CEEEEET
T ss_pred CeEEEEEEeCCCCCEEEEEe----CCCeEEEEECCCCcEEEEecCCC--CCeEEEEEeCCCCEEEEEeCCC--eEEEEEC
Confidence 111 22555 466666433 24679999998876333333333 5678899998777888888887 6888999
Q ss_pred CCCceeeecccC--CeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 438 KNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 438 ~tG~~~~~l~~~--~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
.+++....+... ...+..+.+++++..++.... -..+..||+.+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~----d~~i~vwd~~~~~ 317 (354)
T 2pbi_B 270 RADREVAIYSKESIIFGASSVDFSLSGRLLFAGYN----DYTINVWDVLKGS 317 (354)
T ss_dssp TTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEET----TSCEEEEETTTCS
T ss_pred CCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEEC----CCcEEEEECCCCc
Confidence 866553333322 234667888999987765443 3589999998875
No 369
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.69 E-value=2.2e-07 Score=106.07 Aligned_cols=201 Identities=10% Similarity=-0.004 Sum_probs=117.6
Q ss_pred cceEEEEeC------CcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCC---------cEEEEecCCCCee
Q 003878 237 FSSIAWTHD------SKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE---------DILCWKDPEHPKY 301 (789)
Q Consensus 237 ~~~~~wspD------g~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~---------~~~~~~~~~~~~~ 301 (789)
...++|+|+ ++.|+-...+ ..|.+|++.+.... ....+... ...
T Consensus 210 V~~v~wsp~~~~~~~~~~LAs~s~D-------------------gtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h--~~~ 268 (524)
T 2j04_B 210 VWDLKWHEGCHAPHLVGCLSFVSQE-------------------GTINFLEIIDNATDVHVFKMCEKPSLTLSLA--DSL 268 (524)
T ss_dssp EEEEEECSSCCCSSSSCEEEEEETT-------------------SCEEEEECCCCSSSSSEEECCCSCSEEECCT--TTC
T ss_pred EEEEEECCCCCCCCCCceEEEEecC-------------------CeEEEEEcCCCccccccceeecCceEEEEcC--CCC
Confidence 467899997 4555544322 24788888654321 11122222 334
Q ss_pred EEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeE---EEecCC-CEEEEEE
Q 003878 302 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYE---VIANDD-TVFTFLT 377 (789)
Q Consensus 302 ~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~---~~s~dG-~~l~~~t 377 (789)
+.+++|++++ .|+..+. ...|.++|+.++. .+...+......... .++++| ..|+ ..
T Consensus 269 v~sv~~s~~~-~lasgs~-----DgtV~lWD~~~~~------------~~~~~~~~H~~~V~sv~~~~s~~g~~~la-S~ 329 (524)
T 2j04_B 269 ITTFDFLSPT-TVVCGFK-----NGFVAEFDLTDPE------------VPSFYDQVHDSYILSVSTAYSDFEDTVVS-TV 329 (524)
T ss_dssp EEEEEESSSS-EEEEEET-----TSEEEEEETTBCS------------SCSEEEECSSSCEEEEEEECCTTSCCEEE-EE
T ss_pred EEEEEecCCC-eEEEEeC-----CCEEEEEECCCCC------------CceEEeecccccEEEEEEEcCCCCCeEEE-Ee
Confidence 6789999875 5554432 3568999998641 112222222222222 256777 4444 33
Q ss_pred CCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEee
Q 003878 378 NKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAIS 457 (789)
Q Consensus 378 n~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s 457 (789)
. .+..|.++|+.+++....+..+.....+..+++++++..+++...++ .|.+||+.++.....+....+.|..++
T Consensus 330 S---~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~--tv~lwd~~~~~~~~~l~gH~~~V~sva 404 (524)
T 2j04_B 330 A---VDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGAS--SLRAVPSRAAFAVHPLVSRETTITAIG 404 (524)
T ss_dssp E---TTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSS--EEEEEETTCTTCCEEEEECSSCEEEEE
T ss_pred c---cCCeEEEEECCCCCcccccccccccCcccceEeCCCcCeEEEeCCCC--cEEEEECcccccceeeecCCCceEEEE
Confidence 2 24678899987654222333333222356788998655666666665 689999987776555555667788899
Q ss_pred cccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 458 ARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 458 ~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
++|+++.++ +.+ .-.++..||+..+
T Consensus 405 ~Sp~g~~l~-Sgs---~Dgtv~lwd~~~~ 429 (524)
T 2j04_B 405 VSRLHPMVL-AGS---ADGSLIITNAARR 429 (524)
T ss_dssp CCSSCCBCE-EEE---TTTEEECCBSCSS
T ss_pred eCCCCCeEE-EEE---CCCEEEEEechHh
Confidence 999998654 322 3457888886543
No 370
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=98.69 E-value=1.1e-07 Score=101.15 Aligned_cols=120 Identities=16% Similarity=0.054 Sum_probs=84.6
Q ss_pred eEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchH
Q 003878 520 TKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCF 599 (789)
Q Consensus 520 ~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~ 599 (789)
.++...++.|++.. .+..+.||++||..+.... .|...+...|.++||.|+.+|+||.|.-. .....
T Consensus 14 ~~l~~~i~~p~~~~-~~~~~~VvllHG~~~~~~~-~~~~~l~~~L~~~G~~v~~~d~~g~g~~~-----------~~~~~ 80 (317)
T 1tca_A 14 SVLDAGLTCQGASP-SSVSKPILLVPGTGTTGPQ-SFDSNWIPLSTQLGYTPCWISPPPFMLND-----------TQVNT 80 (317)
T ss_dssp HHHHHTEEETTBCT-TSCSSEEEEECCTTCCHHH-HHTTTHHHHHHTTTCEEEEECCTTTTCSC-----------HHHHH
T ss_pred HHHhheeeCCCCCC-CCCCCeEEEECCCCCCcch-hhHHHHHHHHHhCCCEEEEECCCCCCCCc-----------HHHHH
Confidence 45556677787653 3445678999998765432 12212456677689999999999864311 11235
Q ss_pred HHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCC---CceeEEEecCCccc
Q 003878 600 DDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRP---DLFGCALAHVGVMD 654 (789)
Q Consensus 600 ~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p---d~f~a~v~~~p~~d 654 (789)
+++.+.++++.+.. ..+++.++|||+||+++..++.++| ++++++|+..|..+
T Consensus 81 ~~l~~~i~~~~~~~--g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~~ 136 (317)
T 1tca_A 81 EYMVNAITALYAGS--GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYK 136 (317)
T ss_dssp HHHHHHHHHHHHHT--TSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTT
T ss_pred HHHHHHHHHHHHHh--CCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCCC
Confidence 67788888887652 2368999999999999998888765 78999999887654
No 371
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=98.66 E-value=1.1e-06 Score=95.83 Aligned_cols=240 Identities=10% Similarity=0.045 Sum_probs=139.3
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccccee
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFF 213 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 213 (789)
+..+++||||++||. |+....+++||+.++.......... ..+..|.++ ..+..+.|+..
T Consensus 111 v~~~~~s~~g~~las-----~~~d~~v~iw~~~~~~~~~~~~~~~-~~~~gh~~~----v~~~~~~~~~~---------- 170 (380)
T 3iz6_a 111 VMECAFAPNGQSVAC-----GGLDSACSIFNLSSQADRDGNMPVS-RVLTGHKGY----ASSCQYVPDQE---------- 170 (380)
T ss_dssp CCCCEECTTSSEEEE-----CCSSSCCEEEECCCCSSCCCSSTTC-CBCCCCSSC----CCCCBCCSSSS----------
T ss_pred EEEEEECCCCCEEEE-----eeCCCcEEEEECCCCccccCCccce-eeccCCCcc----eEEEEEecCCC----------
Confidence 456789999999983 4445689999998753211100000 000111110 11112233321
Q ss_pred eEEEeeeccccceeeeeeec---------------ccccceEEEEe-CCcEEEEEEccCCCCCCCCCCCccccCCcccEE
Q 003878 214 FFYLFSLVKSTIYSFWSVVS---------------QFKFSSIAWTH-DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEF 277 (789)
Q Consensus 214 ~~~~~~s~~~g~~~l~~~~~---------------~~~~~~~~wsp-Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i 277 (789)
..++++..+|+..+|.+.. ......++|+| |++.|+-... ...|
T Consensus 171 -~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~-------------------D~~v 230 (380)
T 3iz6_a 171 -TRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSC-------------------DTTV 230 (380)
T ss_dssp -SCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEET-------------------TSCE
T ss_pred -CEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEEC-------------------CCeE
Confidence 3577888999999997643 01124567766 6666554432 2358
Q ss_pred EEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec
Q 003878 278 YYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID 357 (789)
Q Consensus 278 ~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~ 357 (789)
.+|++..... ....+... ...+..+.|+|||++|+..+.+ ..|.++|+.++.. ......
T Consensus 231 ~~wd~~~~~~-~~~~~~~h--~~~v~~v~~~p~~~~l~s~s~D-----~~i~lwd~~~~~~-------------~~~~~~ 289 (380)
T 3iz6_a 231 RLWDLRITSR-AVRTYHGH--EGDINSVKFFPDGQRFGTGSDD-----GTCRLFDMRTGHQ-------------LQVYNR 289 (380)
T ss_dssp EEEETTTTCC-CCEEECCC--SSCCCEEEECTTSSEEEEECSS-----SCEEEEETTTTEE-------------EEEECC
T ss_pred EEEECCCCCc-ceEEECCc--CCCeEEEEEecCCCeEEEEcCC-----CeEEEEECCCCcE-------------EEEecc
Confidence 8899864322 22333332 3345678999999998765432 3488899887420 111100
Q ss_pred c-------c-cceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEecc--CCCCceeeeEEEecCCEEEEEEEeC
Q 003878 358 G-------F-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP--EAERDVLESATAVNLNQMIVSYLSD 427 (789)
Q Consensus 358 ~-------~-~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~--~~~~~~i~~v~~~~~~~lv~~~~~~ 427 (789)
. . ...-..|+|+|+.|+..+ .++.|..+|+..++....+.. ......+..+++++++..+++...|
T Consensus 290 ~~~~~~~~~~~v~~~~~s~~g~~l~~g~----~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D 365 (380)
T 3iz6_a 290 EPDRNDNELPIVTSVAFSISGRLLFAGY----SNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWD 365 (380)
T ss_dssp CCSSSCCSSCSCSEEEECSSSSEEEEEC----TTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTT
T ss_pred cccccccccCceEEEEECCCCCEEEEEE----CCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEeeCC
Confidence 0 0 011234899999877532 346799999887762233311 2223567889999877888888888
Q ss_pred CeEEEEEEECCCC
Q 003878 428 VKYVLQIRDLKNG 440 (789)
Q Consensus 428 g~~~L~~~dl~tG 440 (789)
+ .|.+|++.++
T Consensus 366 ~--~i~iW~~~~~ 376 (380)
T 3iz6_a 366 K--NLKIWAFSGH 376 (380)
T ss_dssp S--CEEEEECCSS
T ss_pred C--CEEEEecCCC
Confidence 7 6888998743
No 372
>3bix_A Neuroligin-1, neuroligin I; esterase domain, alpha-beta hydrolase, cell adhesion, cell J glycoprotein, membrane, postsynaptic cell membrane; HET: NAG; 1.80A {Rattus norvegicus} PDB: 3biw_A* 3b3q_A* 3be8_A* 2wqz_A* 2xb6_A* 2vh8_A 3bl8_A*
Probab=98.66 E-value=2.3e-08 Score=115.21 Aligned_cols=130 Identities=22% Similarity=0.230 Sum_probs=86.7
Q ss_pred cCCCceEEEEEEEecCCCC---CCCCccEEEEEcCCCCccCC-CCCCHHHHHHHHcCCeEEEEEeecCCC-CCChhHHhc
Q 003878 515 SKDGSTKIPMFIVSKKNIK---LDGSHPCLLYGYGGFNISVT-PSFSVSRTILMRHLGAVFCIANIRGGG-EYGEEWHKG 589 (789)
Q Consensus 515 s~dg~~~i~~~l~~p~~~~---~~~~~P~ll~~hGg~~~~~~-~~~~~~~~~~l~~~G~~v~~~~~RG~g-~~g~~~~~~ 589 (789)
+.|. +.+.++.|+... ..++.|+||++|||...... ..+.. ..+....|++|+.+|||.+. +|... .
T Consensus 108 sEdc---L~l~v~~P~~~~~~~~~~~~Pv~v~iHGGg~~~g~~~~~~~--~~la~~~~~vvv~~~YRl~~~Gfl~~---~ 179 (574)
T 3bix_A 108 SEDC---LYLNIYVPTEDDIRDSGGPKPVMVYIHGGSYMEGTGNLYDG--SVLASYGNVIVITVNYRLGVLGFLST---G 179 (574)
T ss_dssp CSCC---CEEEEEEEC--------CCEEEEEECCCSSSSSCCGGGSCC--HHHHHHHTCEEEEECCCCHHHHHCCC---S
T ss_pred CCcC---CEEEEEECCCCCcCCCCCCCcEEEEECCCcccCCCCCccCc--hhhhccCCEEEEEeCCcCcccccCcC---C
Confidence 4565 555677887532 23578999999998543332 23443 23444347999999999643 11100 0
Q ss_pred ccccCCcchHHHHHHHHHHHHHcC---CCCCCcEEEEeeChHHHHHHHHHHhCC---CceeEEEecCCc
Q 003878 590 GALAKKQNCFDDFISASEYLISAG---YTQSRKLCIEGGSNGGLLVGACINQRP---DLFGCALAHVGV 652 (789)
Q Consensus 590 ~~~~~~~~~~~D~~~~~~~L~~~~---~~d~~~i~i~G~S~GG~l~~~~~~~~p---d~f~a~v~~~p~ 652 (789)
.....+...+.|.+++++|+.++- -.||+||.|+|.|+||.+++.++.... .+|+++|+++|.
T Consensus 180 ~~~~~~n~gl~D~~~al~wv~~ni~~fggdp~~vti~G~SaGg~~~~~~~~~~~~~~glf~~aI~~Sg~ 248 (574)
T 3bix_A 180 DQAAKGNYGLLDLIQALRWTSENIGFFGGDPLRITVFGSGAGGSCVNLLTLSHYSEKGLFQRAIAQSGT 248 (574)
T ss_dssp SSSCCCCHHHHHHHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHTCTTSCTTSCCEEEEESCC
T ss_pred CCCCCCcccHHHHHHHHHHHHHHHHHhCCCchhEEEEeecccHHHHHHHhhCCCcchhHHHHHHHhcCC
Confidence 001223456899999999998862 369999999999999999998887543 589999998863
No 373
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=98.66 E-value=6.7e-07 Score=94.83 Aligned_cols=248 Identities=14% Similarity=0.026 Sum_probs=137.0
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceec-ccccccccccccCccceeeeeecccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA-DALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYL 208 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 208 (789)
+.-.|..+++||||++||-+ +...+|+|||+.++.... ..+... .+
T Consensus 12 H~~~V~~v~~s~~g~~lasg-----s~D~~v~lwd~~~~~~~~~~~l~gH-------~~--------------------- 58 (316)
T 3bg1_A 12 HEDMIHDAQMDYYGTRLATC-----SSDRSVKIFDVRNGGQILIADLRGH-------EG--------------------- 58 (316)
T ss_dssp --CCEEEEEECGGGCEEEEE-----ETTTEEEEEEEETTEEEEEEEEECC-------SS---------------------
T ss_pred ccCeEEEeeEcCCCCEEEEE-----eCCCeEEEEEecCCCcEEEEEEcCC-------Cc---------------------
Confidence 33457889999999999843 334589999998874321 112211 00
Q ss_pred ccceeeEEEeeeccccceeeeeeecccccceEEEEeC--CcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCC
Q 003878 209 RGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHD--SKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ 286 (789)
Q Consensus 209 ~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspD--g~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~ 286 (789)
....++|+|+ |+.|+-...+ ..|.+|++.++.
T Consensus 59 ---------------------------~V~~v~~~~~~~~~~l~s~s~D-------------------~~v~iWd~~~~~ 92 (316)
T 3bg1_A 59 ---------------------------PVWQVAWAHPMYGNILASCSYD-------------------RKVIIWREENGT 92 (316)
T ss_dssp ---------------------------CEEEEEECCGGGSSCEEEEETT-------------------SCEEEECCSSSC
T ss_pred ---------------------------cEEEEEeCCCCCCCEEEEEECC-------------------CEEEEEECCCCc
Confidence 2467899864 7777655332 348888887643
Q ss_pred CCcEEEEecCCCCeeEEEEEEecC--CcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc--cce
Q 003878 287 SEDILCWKDPEHPKYIFSGHVTED--GQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF--DAQ 362 (789)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~SpD--G~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~--~~~ 362 (789)
.+....+.. +...+..+.|+|| |.+|+..+.+ ..|.++++.++.. . .......+. ...
T Consensus 93 ~~~~~~~~~--h~~~V~~v~~~p~~~g~~lasgs~D-----~~i~lwd~~~~~~-~----------~~~~~~~~h~~~v~ 154 (316)
T 3bg1_A 93 WEKSHEHAG--HDSSVNSVCWAPHDYGLILACGSSD-----GAISLLTYTGEGQ-W----------EVKKINNAHTIGCN 154 (316)
T ss_dssp CCEEEEECC--CSSCCCEEEECCTTTCSCEEEECSS-----SCEEEEEECSSSC-E----------EECCBTTSSSSCBC
T ss_pred ceEEEEccC--CCCceEEEEECCCCCCcEEEEEcCC-----CCEEEEecCCCCC-c----------ceeeeeccccCCcc
Confidence 232333332 3334567899998 7777654432 3477777765310 0 000000000 001
Q ss_pred eEEEecC-----------------CCEEEEEECCCCCCceEEEEECCCCCCeEEecc-CCCCceeeeEEEecCC----EE
Q 003878 363 YEVIAND-----------------DTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIP-EAERDVLESATAVNLN----QM 420 (789)
Q Consensus 363 ~~~~s~d-----------------G~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~-~~~~~~i~~v~~~~~~----~l 420 (789)
...|+|+ ++.|+ + .+.+..|..+|+.+...++.+.. ......+..+.+++++ .+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--s--gs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~ 230 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFA--S--GGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTST 230 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCCBEE--C--CBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCE
T ss_pred eEEEccccCCccccccccccCccccceEE--E--ecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCce
Confidence 1235554 23333 1 12345667777764422322211 1112467889998853 67
Q ss_pred EEEEEeCCeEEEEEEECCCCc---e-eeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 421 IVSYLSDVKYVLQIRDLKNGS---L-LHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 421 v~~~~~~g~~~L~~~dl~tG~---~-~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
+++...|+ .|++|+++++. . .+.+......+..++++|+++.|+.... -..+.+|+..
T Consensus 231 las~s~D~--~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~----D~~v~lw~~~ 292 (316)
T 3bg1_A 231 IASCSQDG--RVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGG----DNKVTLWKES 292 (316)
T ss_dssp EEEEETTC--EEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEES----SSCEEEEEEC
T ss_pred EEEEcCCC--eEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcC----CCeEEEEEEC
Confidence 88888887 78889987521 1 1222222456778899999987664322 3456667654
No 374
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=98.65 E-value=5.7e-06 Score=90.24 Aligned_cols=216 Identities=18% Similarity=0.120 Sum_probs=138.0
Q ss_pred EEeeeccccceeeeee----ec-c------------c-------------ccceEEEEeCCcEEEEEEccCCCCCCCCCC
Q 003878 216 YLFSLVKSTIYSFWSV----VS-Q------------F-------------KFSSIAWTHDSKGFFYSRYPAPKEGKDMDA 265 (789)
Q Consensus 216 ~~~~s~~~g~~~l~~~----~~-~------------~-------------~~~~~~wspDg~~i~y~~~~~~~~~~~~~~ 265 (789)
+++++..+|...+|.+ .. . . ....++|+|||+.|+....+
T Consensus 60 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~d---------- 129 (425)
T 1r5m_A 60 ILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVEN---------- 129 (425)
T ss_dssp EEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETT----------
T ss_pred EEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCC----------
Confidence 6778888899999988 21 1 1 34678999999999876433
Q ss_pred CccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccc
Q 003878 266 GTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 345 (789)
Q Consensus 266 ~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 345 (789)
..|++|+.. .+....+. .+...+..+.|+|||++|+....+ ..|.++|+.++..
T Consensus 130 ---------g~i~i~~~~---~~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~------- 183 (425)
T 1r5m_A 130 ---------GELRLWNKT---GALLNVLN--FHRAPIVSVKWNKDGTHIISMDVE-----NVTILWNVISGTV------- 183 (425)
T ss_dssp ---------SCEEEEETT---SCEEEEEC--CCCSCEEEEEECTTSSEEEEEETT-----CCEEEEETTTTEE-------
T ss_pred ---------CeEEEEeCC---CCeeeecc--CCCccEEEEEECCCCCEEEEEecC-----CeEEEEECCCCcE-------
Confidence 247777732 22223333 233446789999999999876532 4488889876420
Q ss_pred cCCCCccEeeecccc----------------ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCcee
Q 003878 346 RDGLLPFVKLIDGFD----------------AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVL 409 (789)
Q Consensus 346 ~~~~~~~~~l~~~~~----------------~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i 409 (789)
...+..... .....|++++ .++..+ .++.|..+|+.+++....+..+. ..+
T Consensus 184 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~g~i~~~d~~~~~~~~~~~~~~--~~i 250 (425)
T 1r5m_A 184 ------MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPG----PKGAIFVYQITEKTPTGKLIGHH--GPI 250 (425)
T ss_dssp ------EEEECCC---------------CCCBSCCEEEETT-EEEEEC----GGGCEEEEETTCSSCSEEECCCS--SCE
T ss_pred ------EEEeeccccCccceeeccccCCcceeeEEEEcCCC-EEEEEc----CCCeEEEEEcCCCceeeeeccCC--Cce
Confidence 111100000 1112367764 344322 34679999998876334443333 567
Q ss_pred eeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 410 ESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 410 ~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
..+.+++++.++++...++ .|++||+.+++....+......+..+.+++++ .++ +.+ .-+.++.||+.+++
T Consensus 251 ~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~-~~~---~d~~i~i~d~~~~~ 321 (425)
T 1r5m_A 251 SVLEFNDTNKLLLSASDDG--TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVI-SCS---MDGSVRLWSLKQNT 321 (425)
T ss_dssp EEEEEETTTTEEEEEETTS--CEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEE-EEE---TTSEEEEEETTTTE
T ss_pred EEEEECCCCCEEEEEcCCC--EEEEEECCCCccceEecCCCccEEEEEECCCC-EEE-EEe---CCCcEEEEECCCCc
Confidence 8899998666777777776 68999998777656665556677788899888 333 332 24689999998874
No 375
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.64 E-value=2.1e-06 Score=104.65 Aligned_cols=208 Identities=12% Similarity=0.019 Sum_probs=125.8
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccce
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIF 212 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~ 212 (789)
.+..+++||||++||.+.. ..+|+|||..+++.+.. +... +
T Consensus 19 ~V~~lafspdg~~lAsgs~-----Dg~I~lw~~~~~~~~~~-~~~~--------~------------------------- 59 (902)
T 2oaj_A 19 KPIAAAFDFTQNLLAIATV-----TGEVHIYGQQQVEVVIK-LEDR--------S------------------------- 59 (902)
T ss_dssp CEEEEEEETTTTEEEEEET-----TSEEEEECSTTCEEEEE-CSSC--------C-------------------------
T ss_pred CcEEEEECCCCCEEEEEeC-----CCEEEEEeCCCcEEEEE-cCCC--------C-------------------------
Confidence 4778999999999996442 34899999887654321 1110 0
Q ss_pred eeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEE
Q 003878 213 FFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILC 292 (789)
Q Consensus 213 ~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~ 292 (789)
.+..++|+| |+.|+-... ...|.+|++.++.. +..
T Consensus 60 -----------------------~V~~l~fsp-g~~L~S~s~-------------------D~~v~lWd~~~~~~--~~~ 94 (902)
T 2oaj_A 60 -----------------------AIKEMRFVK-GIYLVVINA-------------------KDTVYVLSLYSQKV--LTT 94 (902)
T ss_dssp -----------------------CEEEEEEET-TTEEEEEET-------------------TCEEEEEETTTCSE--EEE
T ss_pred -----------------------CEEEEEEcC-CCEEEEEEC-------------------cCeEEEEECCCCcE--EEE
Confidence 257899999 886654432 34689999976532 223
Q ss_pred EecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCcc---Eeeeccccc-eeEEEec
Q 003878 293 WKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPF---VKLIDGFDA-QYEVIAN 368 (789)
Q Consensus 293 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~---~~l~~~~~~-~~~~~s~ 368 (789)
+.. ...+..++|+|||++|+....+ ..|.++|+.++... .+.- ...+ ..+...... .-..|+|
T Consensus 95 ~~~---~~~V~~v~~sp~g~~l~sgs~d-----g~V~lwd~~~~~~~--~~~i---~~~~~~~~~~~~h~~~V~sl~~sp 161 (902)
T 2oaj_A 95 VFV---PGKITSIDTDASLDWMLIGLQN-----GSMIVYDIDRDQLS--SFKL---DNLQKSSFFPAARLSPIVSIQWNP 161 (902)
T ss_dssp EEC---SSCEEEEECCTTCSEEEEEETT-----SCEEEEETTTTEEE--EEEE---CCHHHHHTCSSSCCCCCCEEEEET
T ss_pred EcC---CCCEEEEEECCCCCEEEEEcCC-----CcEEEEECCCCccc--ccee---ccccccccccccCCCCeEEEEEcc
Confidence 332 2346789999999999877643 34888999874200 0000 0000 000001111 1234888
Q ss_pred CCCEEEEEECCCCCCceEEEEECCCCCCeEEeccC----------------CCCceeeeEEEecCCEEEEEEEeCCeEEE
Q 003878 369 DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPE----------------AERDVLESATAVNLNQMIVSYLSDVKYVL 432 (789)
Q Consensus 369 dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~----------------~~~~~i~~v~~~~~~~lv~~~~~~g~~~L 432 (789)
++..+++... .++.| .+|+.+++....+..+ .....+..++|++++..+++...|+ .|
T Consensus 162 ~~~~~l~~g~---~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg--~i 235 (902)
T 2oaj_A 162 RDIGTVLISY---EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDN--SL 235 (902)
T ss_dssp TEEEEEEEEC---SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTC--CE
T ss_pred CCCCEEEEEe---CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCC--eE
Confidence 6544444433 34678 9999876522333222 0014578899999778888888887 68
Q ss_pred EEEECCCCcee
Q 003878 433 QIRDLKNGSLL 443 (789)
Q Consensus 433 ~~~dl~tG~~~ 443 (789)
++||+.+|+.+
T Consensus 236 ~lWd~~~g~~~ 246 (902)
T 2oaj_A 236 VFWDANSGHMI 246 (902)
T ss_dssp EEEETTTCCEE
T ss_pred EEEECCCCcEE
Confidence 99999888753
No 376
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.64 E-value=2.6e-06 Score=91.20 Aligned_cols=157 Identities=8% Similarity=0.039 Sum_probs=94.9
Q ss_pred eEEEEEEec--CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc--ceeEEEecCCCEEEEE
Q 003878 301 YIFSGHVTE--DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD--AQYEVIANDDTVFTFL 376 (789)
Q Consensus 301 ~~~~~~~Sp--DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~s~dG~~l~~~ 376 (789)
.+..+.++| +|++++..+.+ ..|.++|+.++. .......... ..-..|+|||..|+.-
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~d-----g~i~~wd~~~~~-------------~~~~~~~~~~~~i~~~~~~pdg~~lasg 188 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNR-----GTIGFQSYEDDS-------------QYIVHSAKSDVEYSSGVLHKDSLLLALY 188 (343)
T ss_dssp CEEEEECCC---CCEEEEEETT-----CCEEEEESSSSC-------------EEEEECCCSSCCCCEEEECTTSCEEEEE
T ss_pred CEEEEEcCCCCCCCEEEEEeCC-----CcEEEEECCCCc-------------EEEEEecCCCCceEEEEECCCCCEEEEE
Confidence 356789999 99998866533 448899998742 1111111111 1223589999877643
Q ss_pred ECCCCCCceEEEEECCCCCCe-EEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeeccc---CCee
Q 003878 377 TNKDAPKYKIIRVDLKEPNDW-FEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI---EIGS 452 (789)
Q Consensus 377 tn~~~~~~~L~~~dl~~~~~~-~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~---~~~~ 452 (789)
+ .++.|..+|+.+++.. ..+.. .....+..+.+++++..+++..++ .|.+||+.+++....+.. +...
T Consensus 189 ~----~dg~i~iwd~~~~~~~~~~~~~-~h~~~v~~l~fs~~g~~l~s~~~~---~v~iwd~~~~~~~~~~~~~~~~~~~ 260 (343)
T 3lrv_A 189 S----PDGILDVYNLSSPDQASSRFPV-DEEAKIKEVKFADNGYWMVVECDQ---TVVCFDLRKDVGTLAYPTYTIPEFK 260 (343)
T ss_dssp C----TTSCEEEEESSCTTSCCEECCC-CTTSCEEEEEECTTSSEEEEEESS---BEEEEETTSSTTCBSSCCCBC----
T ss_pred c----CCCEEEEEECCCCCCCccEEec-cCCCCEEEEEEeCCCCEEEEEeCC---eEEEEEcCCCCcceeeccccccccc
Confidence 2 3467999999887633 33433 123578899999876677766643 799999987765433332 1122
Q ss_pred E--EEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 453 V--NAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 453 v--~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
+ ..++++++++.++.... .-..+..|++.++
T Consensus 261 ~~~~~~~~~~~g~~l~~~s~---~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 261 TGTVTYDIDDSGKNMIAYSN---ESNSLTIYKFDKK 293 (343)
T ss_dssp -CCEEEEECTTSSEEEEEET---TTTEEEEEEECTT
T ss_pred ccceEEEECCCCCEEEEecC---CCCcEEEEEEccc
Confidence 2 24788999987664332 1235677776544
No 377
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=98.63 E-value=1.7e-06 Score=94.08 Aligned_cols=247 Identities=9% Similarity=-0.011 Sum_probs=139.6
Q ss_pred CcEEEEeEEeCC-CCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccc
Q 003878 130 GTAALIKVSVSE-DAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYL 208 (789)
Q Consensus 130 ~~~~~~~~~~Sp-Dg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 208 (789)
+...+..+.++| ++++|+.+ ... ..|++||+.+++.+... ... +....+..++.. +++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~-~~d----~~i~iwd~~~~~~~~~~-~~~--------~~~~~~~~~~~~-~~~------ 156 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSS-SFD----KTLKVWDTNTLQTADVF-NFE--------ETVYSHHMSPVS-TKH------ 156 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEE-ETT----SEEEEEETTTTEEEEEE-ECS--------SCEEEEEECSSC-SSC------
T ss_pred CCCcEEEEEEccCCCcEEEEE-eCC----CeEEEeeCCCCccceec-cCC--------CceeeeEeecCC-CCC------
Confidence 345688899999 66666643 323 37999999998654311 100 000011111111 111
Q ss_pred ccceeeEEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEE
Q 003878 209 RGIFFFFYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFY 278 (789)
Q Consensus 209 ~~~~~~~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~ 278 (789)
.+++++..+|...+|.+.. .-....++|+||++.++++... ...|+
T Consensus 157 ------~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~------------------dg~i~ 212 (408)
T 4a11_B 157 ------CLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASA------------------DSRVK 212 (408)
T ss_dssp ------CEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEET------------------TSCEE
T ss_pred ------cEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcC------------------CCcEE
Confidence 3677888889999998764 1223578999999976555332 22477
Q ss_pred EEECCCCCCCcEEEEec-------------CCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccc
Q 003878 279 YHFLGTKQSEDILCWKD-------------PEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK 345 (789)
Q Consensus 279 ~~~lg~~~~~~~~~~~~-------------~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~ 345 (789)
++++.+..... ..+.. ..+...+..+.|+|||++|+....+ ..|.++|+.++.... .+.
T Consensus 213 i~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-----g~i~vwd~~~~~~~~-~~~- 284 (408)
T 4a11_B 213 LWDVRRASGCL-ITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTD-----NRMRLWNSSNGENTL-VNY- 284 (408)
T ss_dssp EEETTCSSCCS-EECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETT-----SCEEEEETTTCCBCC-CCC-
T ss_pred EEECCCCCccc-ccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCC-----CeEEEEECCCCccce-ecc-
Confidence 88876543211 11100 1223446789999999999876643 348899998753110 000
Q ss_pred cCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEE
Q 003878 346 RDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYL 425 (789)
Q Consensus 346 ~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~ 425 (789)
.. . ................+..+++.+. +..|..+|+.+++....+..+. ..+..+.+++++.++++..
T Consensus 285 ---~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~----~~~i~v~d~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~s~~ 353 (408)
T 4a11_B 285 ---GK-V-CNNSKKGLKFTVSCGCSSEFVFVPY----GSTIAVYTVYSGEQITMLKGHY--KTVDCCVFQSNFQELYSGS 353 (408)
T ss_dssp ---CC-C-CCCCSSCCCCEECCSSSSCEEEEEE----TTEEEEEETTTCCEEEEECCCS--SCEEEEEEETTTTEEEEEE
T ss_pred ---cc-c-cccccccceeEEecCCCceEEEEec----CCEEEEEECcCCcceeeeccCC--CeEEEEEEcCCCCEEEEEC
Confidence 00 0 0000001111212223344444433 3579999998876344443333 5678899998777888888
Q ss_pred eCCeEEEEEEECCCCce
Q 003878 426 SDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 426 ~~g~~~L~~~dl~tG~~ 442 (789)
.++ .|.+|++++++.
T Consensus 354 ~dg--~i~iw~~~~~~~ 368 (408)
T 4a11_B 354 RDC--NILAWVPSLYEP 368 (408)
T ss_dssp TTS--CEEEEEECC---
T ss_pred CCC--eEEEEeCCCCCc
Confidence 887 688899987664
No 378
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=98.61 E-value=4.4e-06 Score=93.16 Aligned_cols=208 Identities=13% Similarity=0.103 Sum_probs=123.2
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEe--cCCcEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVT--EDGQYL 314 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~S--pDG~~l 314 (789)
...++|+||+ .|+.... ...|.+|++.++. ....+... ...+..+.++ ++++++
T Consensus 165 V~~l~~~~~~-~l~s~s~-------------------dg~i~vwd~~~~~--~~~~~~~h--~~~v~~l~~~~~~~~~~l 220 (464)
T 3v7d_B 165 VWALKYAHGG-ILVSGST-------------------DRTVRVWDIKKGC--CTHVFEGH--NSTVRCLDIVEYKNIKYI 220 (464)
T ss_dssp EEEEEECSTT-EEEEEET-------------------TSCEEEEETTTTE--EEEEECCC--SSCEEEEEEEESSSCEEE
T ss_pred EEEEEEcCCC-EEEEEeC-------------------CCCEEEEECCCCc--EEEEECCC--CCccEEEEEecCCCCCEE
Confidence 5788999988 4443322 2358889987653 23333332 3335556666 688888
Q ss_pred EEEEEcCCCCceEEEEEECCCCCCCccccccc---------CCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCce
Q 003878 315 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKR---------DGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYK 385 (789)
Q Consensus 315 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~---------~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~ 385 (789)
+..+.+ ..|.++|+.++.......... ...........+.......++++++.++..+. ++.
T Consensus 221 ~s~s~d-----~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~----d~~ 291 (464)
T 3v7d_B 221 VTGSRD-----NTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSY----DNT 291 (464)
T ss_dssp EEEETT-----SCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEET----TSC
T ss_pred EEEcCC-----CcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeC----CCe
Confidence 766533 348888887642110000000 00000011112222223346788888776543 357
Q ss_pred EEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEE
Q 003878 386 IIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVV 465 (789)
Q Consensus 386 L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l 465 (789)
|..+|+.+++....+..+. ..+..+.+++++..+++...++ .|++||+.+|+....+..+...+..+.++ ++.+
T Consensus 292 i~vwd~~~~~~~~~~~~~~--~~v~~~~~~~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l 365 (464)
T 3v7d_B 292 LIVWDVAQMKCLYILSGHT--DRIYSTIYDHERKRCISASMDT--TIRIWDLENGELMYTLQGHTALVGLLRLS--DKFL 365 (464)
T ss_dssp EEEEETTTTEEEEEECCCS--SCEEEEEEETTTTEEEEEETTS--CEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEE
T ss_pred EEEEECCCCcEEEEecCCC--CCEEEEEEcCCCCEEEEEeCCC--cEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEE
Confidence 9999998775333343333 5678899998667777888877 68999998888767776666667677765 4444
Q ss_pred EEEEcCCCCCcEEEEEECCCCC
Q 003878 466 FISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 466 ~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+ +.+ .-+.+..||+.+++
T Consensus 366 ~-s~s---~dg~v~vwd~~~~~ 383 (464)
T 3v7d_B 366 V-SAA---ADGSIRGWDANDYS 383 (464)
T ss_dssp E-EEE---TTSEEEEEETTTCC
T ss_pred E-EEe---CCCcEEEEECCCCc
Confidence 3 332 24689999998874
No 379
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.59 E-value=3.6e-05 Score=85.34 Aligned_cols=268 Identities=12% Similarity=0.077 Sum_probs=156.2
Q ss_pred EEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccc
Q 003878 132 AALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGI 211 (789)
Q Consensus 132 ~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 211 (789)
..+..+.++ ++.|+.+. . ..+|++||+.+++.+. .+... .+....+.
T Consensus 160 ~~v~~~~~~--~~~l~s~~-~----dg~i~vwd~~~~~~~~-~~~~h-------~~~v~~~~------------------ 206 (445)
T 2ovr_B 160 GGVWSSQMR--DNIIISGS-T----DRTLKVWNAETGECIH-TLYGH-------TSTVRCMH------------------ 206 (445)
T ss_dssp SCEEEEEEE--TTEEEEEE-T----TSCEEEEETTTTEEEE-EECCC-------SSCEEEEE------------------
T ss_pred CCEEEEEec--CCEEEEEe-C----CCeEEEEECCcCcEEE-EECCC-------CCcEEEEE------------------
Confidence 345566665 55665432 2 3479999999986543 11111 00000000
Q ss_pred eeeEEEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEE
Q 003878 212 FFFFYLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHF 281 (789)
Q Consensus 212 ~~~~~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 281 (789)
+.-..++++..+|...+|.+.. ......++| ||+.|+....+ ..|.+++
T Consensus 207 ~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d-------------------g~i~iwd 265 (445)
T 2ovr_B 207 LHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYD-------------------FMVKVWD 265 (445)
T ss_dssp EETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETT-------------------SCEEEEE
T ss_pred ecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCC-------------------CEEEEEE
Confidence 0113477788899999998754 111233444 77777655332 3478888
Q ss_pred CCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccc
Q 003878 282 LGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA 361 (789)
Q Consensus 282 lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~ 361 (789)
+.+.. ....+. .+...+..+.+ ||++++....+ ..|.++|+.++. ....+ .+...
T Consensus 266 ~~~~~--~~~~~~--~~~~~v~~~~~--~~~~l~~~~~d-----~~i~i~d~~~~~-------------~~~~~-~~~~~ 320 (445)
T 2ovr_B 266 PETET--CLHTLQ--GHTNRVYSLQF--DGIHVVSGSLD-----TSIRVWDVETGN-------------CIHTL-TGHQS 320 (445)
T ss_dssp GGGTE--EEEEEC--CCSSCEEEEEE--CSSEEEEEETT-----SCEEEEETTTCC-------------EEEEE-CCCCS
T ss_pred CCCCc--EeEEec--CCCCceEEEEE--CCCEEEEEeCC-----CeEEEEECCCCC-------------EEEEE-cCCcc
Confidence 76542 122222 23333555655 89998776543 448899998742 12222 22122
Q ss_pred eeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCC-CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCC
Q 003878 362 QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA-ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNG 440 (789)
Q Consensus 362 ~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~-~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG 440 (789)
....++.+++.++..+. ++.|..+|+.+++....+..+. ....+..+.+.+ .++++...++ .|.+||+.+|
T Consensus 321 ~v~~~~~~~~~l~~~~~----dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~l~s~~~dg--~v~iwd~~~~ 392 (445)
T 2ovr_B 321 LTSGMELKDNILVSGNA----DSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNK--NFVITSSDDG--TVKLWDLKTG 392 (445)
T ss_dssp CEEEEEEETTEEEEEET----TSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECS--SEEEEEETTS--EEEEEETTTC
T ss_pred cEEEEEEeCCEEEEEeC----CCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECC--CEEEEEeCCC--eEEEEECCCC
Confidence 22335567776665432 3579999998876334443211 234577787754 5666677776 7999999988
Q ss_pred ceeeecc-----cCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 441 SLLHQLP-----IEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 441 ~~~~~l~-----~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
+....+. ...+.+..+.+++++..++.....-..+..++.+|+...
T Consensus 393 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 393 EFIRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp CEEEEEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred ceeeeeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 8766652 235678888999888766655544445778888887643
No 380
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.57 E-value=1.7e-05 Score=86.28 Aligned_cols=77 Identities=12% Similarity=0.049 Sum_probs=51.5
Q ss_pred EEecCCCEEEEEECCC------CCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCE-EEEEEEeCCeEEEEEEEC
Q 003878 365 VIANDDTVFTFLTNKD------APKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDL 437 (789)
Q Consensus 365 ~~s~dG~~l~~~tn~~------~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl 437 (789)
.+++||+++|+..+.. .....|.++|+++.+....+ +-. ....++.++++++ +++.... +...|.++|.
T Consensus 273 ~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i-~~g--~~p~~i~~s~Dg~~~l~v~~~-~~~~V~ViD~ 348 (373)
T 2mad_H 273 AYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI-SLG--HDVDAISVAQDGGPDLYALSA-GTEVLHIYDA 348 (373)
T ss_pred EECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE-ECC--CCcCeEEECCCCCeEEEEEcC-CCCeEEEEEC
Confidence 4789999999876532 12468999999987633333 322 2346788888655 5555442 2358999999
Q ss_pred CCCceeee
Q 003878 438 KNGSLLHQ 445 (789)
Q Consensus 438 ~tG~~~~~ 445 (789)
++++.+..
T Consensus 349 ~t~~vv~~ 356 (373)
T 2mad_H 349 GAGDQDQS 356 (373)
T ss_pred CCCCEEee
Confidence 98887655
No 381
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=98.56 E-value=3.3e-07 Score=99.16 Aligned_cols=215 Identities=9% Similarity=-0.012 Sum_probs=114.8
Q ss_pred CcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCcee-c-ccccccccccccCccceeeeeeccccccccccccc
Q 003878 130 GTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVE-A-DALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLY 207 (789)
Q Consensus 130 ~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 207 (789)
+...+..+++||||++|+.+.. ..+|++||+.+++.. . ..+... . +
T Consensus 54 h~~~v~~~~~s~~~~~l~s~s~-----d~~v~vwd~~~~~~~~~~~~~~~~------~-~-------------------- 101 (377)
T 3dwl_C 54 HDKIVTCVDWAPKSNRIVTCSQ-----DRNAYVYEKRPDGTWKQTLVLLRL------N-R-------------------- 101 (377)
T ss_dssp CSSCEEEEEECTTTCCEEEEET-----TSSEEEC------CCCCEEECCCC------S-S--------------------
T ss_pred CCceEEEEEEeCCCCEEEEEeC-----CCeEEEEEcCCCCceeeeeEeccc------C-C--------------------
Confidence 3445788999999999985442 336999999998611 1 011111 0 0
Q ss_pred cccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC
Q 003878 208 LRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS 287 (789)
Q Consensus 208 ~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~ 287 (789)
....++|+||++.|+....+ ..|++|++.+...
T Consensus 102 ----------------------------~v~~~~~~~~~~~l~~~~~d-------------------~~i~iwd~~~~~~ 134 (377)
T 3dwl_C 102 ----------------------------AATFVRWSPNEDKFAVGSGA-------------------RVISVCYFEQEND 134 (377)
T ss_dssp ----------------------------CEEEEECCTTSSCCEEEESS-------------------SCEEECCC-----
T ss_pred ----------------------------ceEEEEECCCCCEEEEEecC-------------------CeEEEEEECCccc
Confidence 24789999999998876543 2477777766532
Q ss_pred C-cEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcc-cccccCCCCccEeee---ccccce
Q 003878 288 E-DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE-GFKKRDGLLPFVKLI---DGFDAQ 362 (789)
Q Consensus 288 ~-~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~~~~~~~~~~~~l~---~~~~~~ 362 (789)
. ....+..+ +...+..+.|+|||++|+....+ ..|.++|+........ ...+-....+..... ......
T Consensus 135 ~~~~~~~~~~-h~~~v~~~~~~~~~~~l~~~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 208 (377)
T 3dwl_C 135 WWVSKHLKRP-LRSTILSLDWHPNNVLLAAGCAD-----RKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWV 208 (377)
T ss_dssp CCCCEEECSS-CCSCEEEEEECTTSSEEEEEESS-----SCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSE
T ss_pred ceeeeEeecc-cCCCeEEEEEcCCCCEEEEEeCC-----CEEEEEEEEecccCCCccccccccccchhhhhhcccCCceE
Confidence 1 11222321 34456789999999999876643 3377778753210000 000000000111111 111111
Q ss_pred -eEEEecCCCEEEEEECCCCCCceEEEEECCCCCC----eEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEEC
Q 003878 363 -YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND----WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDL 437 (789)
Q Consensus 363 -~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~----~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl 437 (789)
...|+|+|+.|+..+. ++.|..+|+.+++. ...+..+. ..+..+.+++++.++++...++ +.+|+.
T Consensus 209 ~~~~~sp~~~~l~~~~~----d~~i~iwd~~~~~~~~~~~~~~~~~~--~~v~~~~~s~~~~~l~~~~~~~---~~~~~~ 279 (377)
T 3dwl_C 209 HAVGFSPSGNALAYAGH----DSSVTIAYPSAPEQPPRALITVKLSQ--LPLRSLLWANESAIVAAGYNYS---PILLQG 279 (377)
T ss_dssp EEEEECTTSSCEEEEET----TTEEC-CEECSTTSCEEECCCEECSS--SCEEEEEEEETTEEEEEESSSS---EEEECC
T ss_pred EEEEECCCCCEEEEEeC----CCcEEEEECCCCCCcceeeEeecCCC--CceEEEEEcCCCCEEEEEcCCc---EEEEEe
Confidence 2348999997776543 35788888887763 22333332 4578899998778887776554 445665
Q ss_pred C
Q 003878 438 K 438 (789)
Q Consensus 438 ~ 438 (789)
.
T Consensus 280 ~ 280 (377)
T 3dwl_C 280 N 280 (377)
T ss_dssp C
T ss_pred C
Confidence 4
No 382
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.55 E-value=1.7e-05 Score=87.47 Aligned_cols=72 Identities=4% Similarity=0.105 Sum_probs=50.8
Q ss_pred EEEecC-CEEEEEEEeC-------CeEEEEEEECCCCceeeecccCCeeEEEeecccCCc-EEEEEEcCCCCCcEEEEEE
Q 003878 412 ATAVNL-NQMIVSYLSD-------VKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDS-VVFISFTSFLIPGIVYQCN 482 (789)
Q Consensus 412 v~~~~~-~~lv~~~~~~-------g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~-~l~~~~ss~~~P~~ly~~d 482 (789)
+.++++ +++|+..... +...|.++|+++++.+..|..+.. ..++.+++|++ .++.+. . .-..+..+|
T Consensus 324 va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~-P~gia~spDg~~~lyv~n-~--~s~~VsVID 399 (426)
T 3c75_H 324 TAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHE-IDSINVSQDAEPLLYALS-A--GTQTLHIYD 399 (426)
T ss_dssp EEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEE-ECEEEECCSSSCEEEEEE-T--TTTEEEEEE
T ss_pred eEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCC-cCeEEEccCCCEEEEEEc-C--CCCeEEEEE
Confidence 566664 6777765431 246899999999988788865532 44678899998 555433 2 257999999
Q ss_pred CCCCC
Q 003878 483 LKTET 487 (789)
Q Consensus 483 l~tg~ 487 (789)
+.+++
T Consensus 400 ~~t~k 404 (426)
T 3c75_H 400 AATGE 404 (426)
T ss_dssp TTTCC
T ss_pred CCCCC
Confidence 99986
No 383
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.55 E-value=1.3e-06 Score=95.66 Aligned_cols=199 Identities=9% Similarity=-0.056 Sum_probs=101.9
Q ss_pred cceEEEEe--------CCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEe
Q 003878 237 FSSIAWTH--------DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVT 308 (789)
Q Consensus 237 ~~~~~wsp--------Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~S 308 (789)
+.+++|+| ||+.|+-... ...|++|++.+... ...++.. ...+.+++|+
T Consensus 139 v~~v~~~p~~~~~~~~d~~~las~s~-------------------D~tv~~Wd~~~~~~-~~~~~~~---~~~v~~v~~~ 195 (393)
T 4gq1_A 139 VNDIDIADVYSADNRLAEQVIASVGD-------------------DCTLIIWRLTDEGP-ILAGYPL---SSPGISVQFR 195 (393)
T ss_dssp EEEEEEEEEECTTCSEEEEEEEEEET-------------------TSEEEEEEEETTEE-EEEEEEC---SSCEEEEEEE
T ss_pred eEEEEEccccccccCCCCCEEEEEEC-------------------CCeEEEEECCCCce-eeeecCC---CCCcEEEEEC
Confidence 57899998 8877775433 34688999865432 2223332 2235689999
Q ss_pred cCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCC--CccE-------e---eeccccc--eeEEEecCCCEEE
Q 003878 309 EDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGL--LPFV-------K---LIDGFDA--QYEVIANDDTVFT 374 (789)
Q Consensus 309 pDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~--~~~~-------~---l~~~~~~--~~~~~s~dG~~l~ 374 (789)
|++..+++.... ...|.++|+.++............. .... . ....... ....+.+||+.|+
T Consensus 196 p~~~~~l~~~~~----d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~ 271 (393)
T 4gq1_A 196 PSNPNQLIVGER----NGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGIL 271 (393)
T ss_dssp TTEEEEEEEEET----TSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEE
T ss_pred CCCCceEEecCC----CCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEE
Confidence 999866655543 3558889988753110000000000 0000 0 0000010 1122347888776
Q ss_pred EEECCCCCCceEEEEECCCCCCeEEeccCCC----------------CceeeeEEEec--CCEEEEEEEeCCeEEEEEEE
Q 003878 375 FLTNKDAPKYKIIRVDLKEPNDWFEVIPEAE----------------RDVLESATAVN--LNQMIVSYLSDVKYVLQIRD 436 (789)
Q Consensus 375 ~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~----------------~~~i~~v~~~~--~~~lv~~~~~~g~~~L~~~d 436 (789)
-.+. +..+..+|+..+.....+..+.. ........+.+ ++.+++....++ .|++||
T Consensus 272 s~s~----d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg--~V~lwd 345 (393)
T 4gq1_A 272 AMCK----SGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHG--LIQLIN 345 (393)
T ss_dssp EECT----TSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTT--EEEEEE
T ss_pred EEeC----CCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCC--EEEEEE
Confidence 4332 35677788765431111111100 00011122222 345666666676 799999
Q ss_pred CCCCceeeecccCCeeEEEeecccCCcEEEEE
Q 003878 437 LKNGSLLHQLPIEIGSVNAISARREDSVVFIS 468 (789)
Q Consensus 437 l~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~ 468 (789)
..+|+....+......|..++++||++.|+..
T Consensus 346 ~~~~~~~~~~~~~~~~V~svafspdG~~LA~a 377 (393)
T 4gq1_A 346 TYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIA 377 (393)
T ss_dssp TTCTTCCEEEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEecCCCCcEEEEEEcCCCCEEEEE
Confidence 98887644444345678889999999988764
No 384
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=98.53 E-value=4e-06 Score=90.02 Aligned_cols=209 Identities=9% Similarity=-0.034 Sum_probs=124.2
Q ss_pred cEEEEeEEeCCC--CcEEEEEEecCCceEEEEEEEEcCCCceecc-cccccccccccCccceeeeeeccccccccccccc
Q 003878 131 TAALIKVSVSED--AKYLAYALSYSGSDWATIKLMRIEDQIVEAD-ALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLY 207 (789)
Q Consensus 131 ~~~~~~~~~SpD--g~~la~~~~~~g~~~~~i~v~dl~tg~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 207 (789)
...+..+.|||+ |++|+.+.. ..+|++||+.+++.... .+... .+
T Consensus 55 ~~~v~~~~~~~~~~~~~l~s~~~-----dg~v~iwd~~~~~~~~~~~~~~~-------~~-------------------- 102 (379)
T 3jrp_A 55 EGPVWRVDWAHPKFGTILASCSY-----DGKVLIWKEENGRWSQIAVHAVH-------SA-------------------- 102 (379)
T ss_dssp SSCEEEEEECCGGGCSEEEEEET-----TSCEEEEEEETTEEEEEEEECCC-------SS--------------------
T ss_pred CCcEEEEEeCCCCCCCEEEEecc-----CCEEEEEEcCCCceeEeeeecCC-------Cc--------------------
Confidence 345788899988 888875432 23799999999852211 11111 00
Q ss_pred cccceeeEEEeeeccccceeeeeeecccccceEEEEeC--CcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCC
Q 003878 208 LRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHD--SKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK 285 (789)
Q Consensus 208 ~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspD--g~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~ 285 (789)
....++|+|+ ++.|+....+ ..|.++++.+.
T Consensus 103 ----------------------------~v~~~~~~~~~~~~~l~~~~~d-------------------~~i~v~d~~~~ 135 (379)
T 3jrp_A 103 ----------------------------SVNSVQWAPHEYGPLLLVASSD-------------------GKVSVVEFKEN 135 (379)
T ss_dssp ----------------------------CEEEEEECCGGGCSEEEEEETT-------------------SEEEEEECCTT
T ss_pred ----------------------------ceEEEEeCCCCCCCEEEEecCC-------------------CcEEEEecCCC
Confidence 2578999999 8888876433 35888898776
Q ss_pred CCCcEEEEecCCCCeeEEEEEEec-------------CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCcc
Q 003878 286 QSEDILCWKDPEHPKYIFSGHVTE-------------DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPF 352 (789)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~~~~~Sp-------------DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 352 (789)
.......+... ...+..+.|+| |+++++....+ ..|+++|+.++... ....
T Consensus 136 ~~~~~~~~~~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d-----g~i~i~d~~~~~~~---------~~~~ 199 (379)
T 3jrp_A 136 GTTSPIIIDAH--AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGAD-----NLVKIWKYNSDAQT---------YVLE 199 (379)
T ss_dssp SCCCEEEEECC--TTCEEEEEECCCC----------CTTCEEEEEETT-----SCEEEEEEETTTTE---------EEEE
T ss_pred CceeeEEecCC--CCceEEEEEcCccccccccccCCCCCCEEEEEeCC-----CeEEEEEecCCCcc---------eeeE
Confidence 44444444332 33466889999 68888876543 34788887653210 0001
Q ss_pred Eeeeccccce-eEEEecC---CCEEEEEECCCCCCceEEEEECCCCC-C-eEEecc-CCCCceeeeEEEecCCEEEEEEE
Q 003878 353 VKLIDGFDAQ-YEVIAND---DTVFTFLTNKDAPKYKIIRVDLKEPN-D-WFEVIP-EAERDVLESATAVNLNQMIVSYL 425 (789)
Q Consensus 353 ~~l~~~~~~~-~~~~s~d---G~~l~~~tn~~~~~~~L~~~dl~~~~-~-~~~l~~-~~~~~~i~~v~~~~~~~lv~~~~ 425 (789)
..+....... -..|+|+ ++.|+..+. ++.|..+|+.++. . ...+.. ......+..+.+++++.++++..
T Consensus 200 ~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~ 275 (379)
T 3jrp_A 200 STLEGHSDWVRDVAWSPTVLLRSYLASVSQ----DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSG 275 (379)
T ss_dssp EEECCCSSCEEEEEECCCCSSSEEEEEEET----TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEE
T ss_pred EEEecccCcEeEEEECCCCCCCCeEEEEeC----CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEec
Confidence 1111111111 2348998 665554432 3467888877653 1 122322 22235678899998777777777
Q ss_pred eCCeEEEEEEECCCC
Q 003878 426 SDVKYVLQIRDLKNG 440 (789)
Q Consensus 426 ~~g~~~L~~~dl~tG 440 (789)
.++ .|++|++..+
T Consensus 276 ~dg--~i~iw~~~~~ 288 (379)
T 3jrp_A 276 GDN--KVTLWKENLE 288 (379)
T ss_dssp SSS--SEEEEEEEET
T ss_pred CCC--cEEEEeCCCC
Confidence 777 4666666533
No 385
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.51 E-value=1.3e-05 Score=84.42 Aligned_cols=153 Identities=12% Similarity=0.091 Sum_probs=89.6
Q ss_pred EEEEecCCcEEEEEEEc-CC------------CCceEEEEEECCCCCCCcccccccCCCCccEeeeccccc-eeEEEecC
Q 003878 304 SGHVTEDGQYLVMCIEE-NC------------DPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIAND 369 (789)
Q Consensus 304 ~~~~SpDG~~l~~~~~~-~~------------~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~d 369 (789)
.+.++|||+.. ++... +. .....||.++.+++. +..+. +... .-..|+||
T Consensus 135 ~i~~d~dG~l~-~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~--------------~~~~~-~~~~p~gl~~spd 198 (305)
T 3dr2_A 135 DLIVARDGAIW-FTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSP--------------LQRMA-DLDHPNGLAFSPD 198 (305)
T ss_dssp CEEECTTSCEE-EECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCC--------------CEEEE-EESSEEEEEECTT
T ss_pred CEEECCCCCEE-EeCcCCCccccccccccccccCCCeEEEEcCCCCc--------------EEEEe-cCCCCcceEEcCC
Confidence 47889999844 42100 00 113679999986642 12222 2211 22358999
Q ss_pred CCEEEEEECCC--CCCceEEEEECCCCC-CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeec
Q 003878 370 DTVFTFLTNKD--APKYKIIRVDLKEPN-DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL 446 (789)
Q Consensus 370 G~~l~~~tn~~--~~~~~L~~~dl~~~~-~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l 446 (789)
|+.||+..... ..+.+|+++++++.. .-..++.........++.+.+++.+++.. .+ .|++++.+ |+....+
T Consensus 199 g~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~~-~~---gv~~~~~~-g~~~~~~ 273 (305)
T 3dr2_A 199 EQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSSS-GT---GVCVFDSD-GQLLGHI 273 (305)
T ss_dssp SSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEECC-SS---EEEEECTT-SCEEEEE
T ss_pred CCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEec-CC---cEEEECCC-CCEEEEE
Confidence 99998875431 113679998876542 00122211112334567787766776654 33 49999996 7766677
Q ss_pred ccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEEC
Q 003878 447 PIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNL 483 (789)
Q Consensus 447 ~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl 483 (789)
..+.. +..+.++++++.|+++.+. .+|++++
T Consensus 274 ~~~~~-~~~~~f~~d~~~L~it~~~-----~l~~~~~ 304 (305)
T 3dr2_A 274 PTPGT-ASNCTFDQAQQRLFITGGP-----CLWMLPL 304 (305)
T ss_dssp ECSSC-CCEEEECTTSCEEEEEETT-----EEEEEEC
T ss_pred ECCCc-eeEEEEeCCCCEEEEEcCC-----eEEEEEC
Confidence 66643 4456677888888886543 7787764
No 386
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=98.50 E-value=2.1e-07 Score=103.86 Aligned_cols=114 Identities=9% Similarity=-0.025 Sum_probs=80.8
Q ss_pred CCCccEEEEEcCCCCccCCCCCCHHH-HHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcC
Q 003878 535 DGSHPCLLYGYGGFNISVTPSFSVSR-TILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG 613 (789)
Q Consensus 535 ~~~~P~ll~~hGg~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~ 613 (789)
+...|+||++||..+.. ...|.... ..+++..||.|+++|+||.|..... .. ...-....+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~l~~~l~~~~~~~Vi~~D~~G~G~S~~~--~~--~~~~~~~~~dl~~li~~L~~~~ 141 (452)
T 1bu8_A 67 QLDRKTRFIVHGFIDKG-EDGWLLDMCKKMFQVEKVNCICVDWRRGSRTEYT--QA--SYNTRVVGAEIAFLVQVLSTEM 141 (452)
T ss_dssp CTTSEEEEEECCSCCTT-CTTHHHHHHHHHHTTCCEEEEEEECHHHHSSCHH--HH--HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCC-CchHHHHHHHHHHhhCCCEEEEEechhcccCchh--Hh--HhhHHHHHHHHHHHHHHHHHhc
Confidence 34578999999987654 23444423 4455434999999999997754311 11 0111123467778888887553
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 614 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 614 ~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
.++.+++.++|||+||.+++.++.++|++++++|...|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1bu8_A 142 GYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCccceEEEEEChhHHHHHHHHHhcccccceEEEecCCc
Confidence 3567899999999999999999999999999999877643
No 387
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.48 E-value=2.3e-05 Score=83.59 Aligned_cols=201 Identities=10% Similarity=0.052 Sum_probs=114.0
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCC------CCeeEEEEEEecC
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPE------HPKYIFSGHVTED 310 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~------~~~~~~~~~~SpD 310 (789)
...++++||| .+|++.. ....|+++++.+..... ...... .+. .+.+ +
T Consensus 86 p~~i~~~~~g-~lyv~~~------------------~~~~v~~iD~~t~~~~~--~i~~g~~~~~~~~p~---~i~~--~ 139 (328)
T 3dsm_A 86 PRYIHFLSDE-KAYVTQI------------------WDYRIFIINPKTYEITG--YIECPDMDMESGSTE---QMVQ--Y 139 (328)
T ss_dssp EEEEEEEETT-EEEEEEB------------------SCSEEEEEETTTTEEEE--EEECTTCCTTTCBCC---CEEE--E
T ss_pred CcEEEEeCCC-eEEEEEC------------------CCCeEEEEECCCCeEEE--EEEcCCccccCCCcc---eEEE--E
Confidence 3678899998 6766531 23458888876643221 122222 222 3444 5
Q ss_pred CcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCC-------C
Q 003878 311 GQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAP-------K 383 (789)
Q Consensus 311 G~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~-------~ 383 (789)
+++|++.... ....|+++|++++. ....+..+.......++++|+ +|+.++.+.. .
T Consensus 140 ~~~lyv~~~~---~~~~v~viD~~t~~-------------~~~~i~~g~~p~~i~~~~dG~-l~v~~~~~~~~~~~~~~~ 202 (328)
T 3dsm_A 140 GKYVYVNCWS---YQNRILKIDTETDK-------------VVDELTIGIQPTSLVMDKYNK-MWTITDGGYEGSPYGYEA 202 (328)
T ss_dssp TTEEEEEECT---TCCEEEEEETTTTE-------------EEEEEECSSCBCCCEECTTSE-EEEEBCCBCTTCSSCBCC
T ss_pred CCEEEEEcCC---CCCEEEEEECCCCe-------------EEEEEEcCCCccceEEcCCCC-EEEEECCCccCCccccCC
Confidence 7777665421 13579999998742 111121122222234678876 6666553211 2
Q ss_pred ceEEEEECCCCCCeEEeccCCCCceeeeEEEecC-CEEEEEEEeCCeEEEEEEECCCCceeee--cccCCeeEEEeeccc
Q 003878 384 YKIIRVDLKEPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQ--LPIEIGSVNAISARR 460 (789)
Q Consensus 384 ~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~-~~lv~~~~~~g~~~L~~~dl~tG~~~~~--l~~~~~~v~~~s~s~ 460 (789)
..|+++|.++++ ....+.-.......+++++++ +.+|+.. . .|+++|+++++.... ++.......++.++|
T Consensus 203 ~~v~~id~~t~~-v~~~~~~~~g~~p~~la~~~d~~~lyv~~---~--~v~~~d~~t~~~~~~~~~~~~~~~p~gi~vdp 276 (328)
T 3dsm_A 203 PSLYRIDAETFT-VEKQFKFKLGDWPSEVQLNGTRDTLYWIN---N--DIWRMPVEADRVPVRPFLEFRDTKYYGLTVNP 276 (328)
T ss_dssp CEEEEEETTTTE-EEEEEECCTTCCCEEEEECTTSCEEEEES---S--SEEEEETTCSSCCSSCSBCCCSSCEEEEEECT
T ss_pred ceEEEEECCCCe-EEEEEecCCCCCceeEEEecCCCEEEEEc---c--EEEEEECCCCceeeeeeecCCCCceEEEEEcC
Confidence 689999998775 332222111123567888874 4555532 2 689999987765221 221123455778888
Q ss_pred CCcEEEEEE-cCCCCCcEEEEEECCCCC
Q 003878 461 EDSVVFISF-TSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 461 d~~~l~~~~-ss~~~P~~ly~~dl~tg~ 487 (789)
++..++++- .++.....+++||.+ ++
T Consensus 277 ~~g~lyva~~~~y~~~~~V~v~d~~-g~ 303 (328)
T 3dsm_A 277 NNGEVYVADAIDYQQQGIVYRYSPQ-GK 303 (328)
T ss_dssp TTCCEEEEECTTSSSEEEEEEECTT-CC
T ss_pred CCCeEEEEcccccccCCEEEEECCC-CC
Confidence 777788763 344567899999987 64
No 388
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=98.47 E-value=4.8e-06 Score=101.48 Aligned_cols=159 Identities=8% Similarity=0.017 Sum_probs=85.2
Q ss_pred CCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccE--ee---e-cccccee-EEEe---
Q 003878 298 HPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFV--KL---I-DGFDAQY-EVIA--- 367 (789)
Q Consensus 298 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~--~l---~-~~~~~~~-~~~s--- 367 (789)
+...+.++++|||| +|+.... ...|.++|++++. .+. .+ . ....... ..|+
T Consensus 574 h~~~V~svafSpdG-~lAsgs~-----D~tv~lwd~~~~~-------------~~~~~~~~~~~~gh~~~V~sv~Fs~~~ 634 (902)
T 2oaj_A 574 NKGKTSAINNSNIG-FVGIAYA-----AGSLMLIDRRGPA-------------IIYMENIREISGAQSACVTCIEFVIME 634 (902)
T ss_dssp CSCSEEEEEECBTS-EEEEEET-----TSEEEEEETTTTE-------------EEEEEEGGGTCSSCCCCEEEEEEEEEE
T ss_pred CCCcEEEEEecCCc-EEEEEeC-----CCcEEEEECCCCe-------------EEEEeehhHhccccccceEEEEEEEEe
Confidence 34456789999999 8876653 3458889987631 010 11 0 1111112 3488
Q ss_pred --cCC---CEEEEEECCCCCCceEEEEEC---CCCCCeEEeccCC---CCceeeeEE-Ee--------------------
Q 003878 368 --NDD---TVFTFLTNKDAPKYKIIRVDL---KEPNDWFEVIPEA---ERDVLESAT-AV-------------------- 415 (789)
Q Consensus 368 --~dG---~~l~~~tn~~~~~~~L~~~dl---~~~~~~~~l~~~~---~~~~i~~v~-~~-------------------- 415 (789)
||| +.|+..++. ..|.++++ .+++....+..+. ....+..+. +.
T Consensus 635 ~~~Dg~~~~~l~sgs~D----~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~ 710 (902)
T 2oaj_A 635 YGDDGYSSILMVCGTDM----GEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKG 710 (902)
T ss_dssp CTTSSSEEEEEEEEETT----SEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGT
T ss_pred cCCCCCcceEEEEEecC----CcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCC
Confidence 886 556554443 56777776 4544112222221 012223333 22
Q ss_pred --cCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEe---e------cccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 416 --NLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAI---S------ARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 416 --~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~---s------~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
. +..++...+. .+++|++.+++..+.+-.....+..+ . +++++..|+. ...-+++..|++.
T Consensus 711 ~~~-~~~~l~~~~~---~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~----~~~~g~i~~~s~p 782 (902)
T 2oaj_A 711 LCI-PGIVLITGFD---DIRLITLGKSKSTHKGFKYPLAATGLSYISTVEKNNDRKNLTVIIT----LEINGHLRVFTIP 782 (902)
T ss_dssp CCC-CEEEEEECSS---EEEEECTTCCCEEEEECSSCEEEEEEEEEEEECSSSCEEEEEEEEE----EETTSEEEEEETT
T ss_pred CCC-CeEEEEEecc---ceEEEeCccccceeeEcccceeeeEEEEEEeccccccccCceEEEE----EeCCCcEEEEECc
Confidence 2 3444444433 69999998887654442223444343 3 4455554443 2356799999999
Q ss_pred CCC
Q 003878 485 TET 487 (789)
Q Consensus 485 tg~ 487 (789)
+.+
T Consensus 783 ~l~ 785 (902)
T 2oaj_A 783 DFK 785 (902)
T ss_dssp TCC
T ss_pred chH
Confidence 886
No 389
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=98.45 E-value=0.00031 Score=75.74 Aligned_cols=211 Identities=10% Similarity=0.052 Sum_probs=111.0
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECC-CCCCCcEEEEecC--CCCeeEEEEEEecCCcE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLG-TKQSEDILCWKDP--EHPKYIFSGHVTEDGQY 313 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg-~~~~~~~~~~~~~--~~~~~~~~~~~SpDG~~ 313 (789)
...++|+|||+.||.... . .+.++++. ++. ...+...+ ..+ ..+.+||||++
T Consensus 42 ~~~~a~spdg~~l~~~~~------------------~--~v~~~~~~~~g~--~~~~~~~~~~g~~---~~~~~spdg~~ 96 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAM------------------K--KWSSFAVKSPTE--IVHEASHPIGGHP---RANDADTNTRA 96 (365)
T ss_dssp CSEEEECTTSSEEEEEEB------------------T--EEEEEEEEETTE--EEEEEEEECCSSG---GGGCTTSCCEE
T ss_pred CcEEEECCCCCEEEEEcc------------------c--eEEEEEECCCCC--EEEeeEeecCCCC---ccEEECCCCCE
Confidence 367999999998876532 1 57777765 321 11122211 111 23678999997
Q ss_pred EEEEEEc-------CC---CCceEEEEEECCC-CCCCcccccccCCCCccEeee---ccccceeEEEecCCCEEEEEECC
Q 003878 314 LVMCIEE-------NC---DPVNKVYYCDLSA-LPEGLEGFKKRDGLLPFVKLI---DGFDAQYEVIANDDTVFTFLTNK 379 (789)
Q Consensus 314 l~~~~~~-------~~---~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~l~---~~~~~~~~~~s~dG~~l~~~tn~ 379 (789)
|++.+.+ .. .....+.+++++. +. ........ .........|+|||+.+|+. +.
T Consensus 97 l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~-----------~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~-~~ 164 (365)
T 1jof_A 97 IFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGK-----------LEKNVQNYEYQENTGIHGMVFDPTETYLYSA-DL 164 (365)
T ss_dssp EEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCC-----------EEEEEEEEECCTTCCEEEEEECTTSSEEEEE-ET
T ss_pred EEEEEecCCcceeccceeecCCceEEEEccCCCCc-----------CcceEeeEEeCCCCcceEEEECCCCCEEEEE-cC
Confidence 5433221 00 0123466666653 21 00011111 11112234589999988754 43
Q ss_pred CCCCceEEEEECC-CCCCeEEe--cc-CCCCceeeeEEEecCCEEEEEEEe-CCeEEEEEEECCCCcee---eecc-cCC
Q 003878 380 DAPKYKIIRVDLK-EPNDWFEV--IP-EAERDVLESATAVNLNQMIVSYLS-DVKYVLQIRDLKNGSLL---HQLP-IEI 450 (789)
Q Consensus 380 ~~~~~~L~~~dl~-~~~~~~~l--~~-~~~~~~i~~v~~~~~~~lv~~~~~-~g~~~L~~~dl~tG~~~---~~l~-~~~ 450 (789)
+ ..+|++++++ +++ ...+ +. .........+.++++++.++.... ++.-.++.++.++|+.. ..+. ++.
T Consensus 165 ~--~~~v~~~~~~~~g~-~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~ 241 (365)
T 1jof_A 165 T--ANKLWTHRKLASGE-VELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP 241 (365)
T ss_dssp T--TTEEEEEEECTTSC-EEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT
T ss_pred C--CCEEEEEEECCCCC-EEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC
Confidence 2 3578888887 554 3222 11 111234677889986544444443 44334444455566531 1221 221
Q ss_pred ---e---------eEEEee-cccCCcEEEEEEcCC--CCCcEEEEEECC-CCC
Q 003878 451 ---G---------SVNAIS-ARREDSVVFISFTSF--LIPGIVYQCNLK-TET 487 (789)
Q Consensus 451 ---~---------~v~~~s-~s~d~~~l~~~~ss~--~~P~~ly~~dl~-tg~ 487 (789)
+ .+..+. ++||++.++++-.+. ..|.++..|+++ +++
T Consensus 242 ~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~ 294 (365)
T 1jof_A 242 GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGS 294 (365)
T ss_dssp TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSC
T ss_pred CcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCC
Confidence 1 466788 999999887654322 235688888885 564
No 390
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=98.44 E-value=3.4e-07 Score=102.08 Aligned_cols=114 Identities=10% Similarity=-0.036 Sum_probs=79.7
Q ss_pred CCCccEEEEEcCCCCccCCCCCCHHH-HHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcC
Q 003878 535 DGSHPCLLYGYGGFNISVTPSFSVSR-TILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG 613 (789)
Q Consensus 535 ~~~~P~ll~~hGg~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~ 613 (789)
+...|++|++||..+.. ...|.... ..+++..||.|+++|+||.|..... ... ..-....+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~~~-~~~w~~~~~~~l~~~~~~~Vi~~D~~g~G~S~~~--~~~--~~~~~~~~dl~~~i~~L~~~~ 141 (452)
T 1w52_X 67 QSSRKTHFVIHGFRDRG-EDSWPSDMCKKILQVETTNCISVDWSSGAKAEYT--QAV--QNIRIVGAETAYLIQQLLTEL 141 (452)
T ss_dssp CTTSCEEEEECCTTCCS-SSSHHHHHHHHHHTTSCCEEEEEECHHHHTSCHH--HHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEEcCCCCCC-CchHHHHHHHHHHhhCCCEEEEEecccccccccH--HHH--HhHHHHHHHHHHHHHHHHHhc
Confidence 34568999999976543 23444423 3444434999999999997764321 110 011122467777888887542
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCcc
Q 003878 614 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVM 653 (789)
Q Consensus 614 ~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~~ 653 (789)
..+.+++.++|||+||.+++.++.++|++++++|...|..
T Consensus 142 g~~~~~i~LvGhSlGg~vA~~~a~~~p~~v~~iv~ldpa~ 181 (452)
T 1w52_X 142 SYNPENVHIIGHSLGAHTAGEAGRRLEGRVGRVTGLDPAE 181 (452)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCBC
T ss_pred CCCcccEEEEEeCHHHHHHHHHHHhcccceeeEEeccccc
Confidence 3457899999999999999999999999999999877643
No 391
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=98.44 E-value=4.9e-06 Score=91.96 Aligned_cols=117 Identities=15% Similarity=0.077 Sum_probs=71.3
Q ss_pred cceEEEEeCC-cEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCC--cEEEEecCCCC----------eeEE
Q 003878 237 FSSIAWTHDS-KGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSE--DILCWKDPEHP----------KYIF 303 (789)
Q Consensus 237 ~~~~~wspDg-~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~--~~~~~~~~~~~----------~~~~ 303 (789)
...++|+||| +.|+....+ ..|++|++.+.... ....+.....+ ..+.
T Consensus 229 v~~~~~~p~~~~~l~s~~~d-------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 289 (447)
T 3dw8_B 229 ITAAEFHPNSCNTFVYSSSK-------------------GTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSIS 289 (447)
T ss_dssp EEEEEECSSCTTEEEEEETT-------------------SCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEE
T ss_pred eEEEEECCCCCcEEEEEeCC-------------------CeEEEEECcCCccccceeeEeccCCCccccccccccCceEE
Confidence 5789999999 777765432 24888898765421 12344443210 1467
Q ss_pred EEEEecCCcEEEEEEEcCCCCceEEEEEECCC-CCCCcccccccCCCCccEeeecccc----------------ceeEEE
Q 003878 304 SGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA-LPEGLEGFKKRDGLLPFVKLIDGFD----------------AQYEVI 366 (789)
Q Consensus 304 ~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~-g~~~~~~~~~~~~~~~~~~l~~~~~----------------~~~~~~ 366 (789)
.+.|+|||++|+.... ..|.++|+.+ +. +...+..... ..-..|
T Consensus 290 ~~~~s~~g~~l~~~~~------~~v~iwd~~~~~~-------------~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~ 350 (447)
T 3dw8_B 290 DVKFSHSGRYMMTRDY------LSVKVWDLNMENR-------------PVETYQVHEYLRSKLCSLYENDCIFDKFECCW 350 (447)
T ss_dssp EEEECTTSSEEEEEES------SEEEEEETTCCSS-------------CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEE
T ss_pred EEEECCCCCEEEEeeC------CeEEEEeCCCCcc-------------ccceeeccccccccccccccccccccceEEEE
Confidence 8999999999986542 4588899875 21 1111111100 001458
Q ss_pred ecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 367 ANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 367 s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
+|+|+.|+..+ .++.|..+|+.+++
T Consensus 351 s~~~~~l~s~s----~dg~v~iwd~~~~~ 375 (447)
T 3dw8_B 351 NGSDSVVMTGS----YNNFFRMFDRNTKR 375 (447)
T ss_dssp CTTSSEEEEEC----STTEEEEEETTTCC
T ss_pred CCCCCEEEEec----cCCEEEEEEcCCCc
Confidence 99999885322 34689999998775
No 392
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=98.41 E-value=1.9e-06 Score=89.83 Aligned_cols=104 Identities=14% Similarity=0.066 Sum_probs=63.8
Q ss_pred EEEEEcCCCCccCC-CCCCHHHHHHHHcC--CeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCC
Q 003878 540 CLLYGYGGFNISVT-PSFSVSRTILMRHL--GAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 616 (789)
Q Consensus 540 ~ll~~hGg~~~~~~-~~~~~~~~~~l~~~--G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d 616 (789)
.||++||..+.... ..|.. ....|++. |+.|+.+|+ |.|....... +.. ...-+++.+.++.+......
T Consensus 7 pvVllHG~~~~~~~~~~~~~-~~~~L~~~~~g~~v~~~d~-G~g~s~~~~~--~~~---~~~~~~~~~~~~~l~~~~~l- 78 (279)
T 1ei9_A 7 PLVIWHGMGDSCCNPLSMGA-IKKMVEKKIPGIHVLSLEI-GKTLREDVEN--SFF---LNVNSQVTTVCQILAKDPKL- 78 (279)
T ss_dssp CEEEECCTTCCSCCTTTTHH-HHHHHHHHSTTCCEEECCC-SSSHHHHHHH--HHH---SCHHHHHHHHHHHHHSCGGG-
T ss_pred cEEEECCCCCCCCCcccHHH-HHHHHHHHCCCcEEEEEEe-CCCCcccccc--ccc---cCHHHHHHHHHHHHHhhhhc-
Confidence 38899997765533 24554 34555533 889999997 7653211100 000 11223333344444332111
Q ss_pred CCcEEEEeeChHHHHHHHHHHhCCCc-eeEEEecCC
Q 003878 617 SRKLCIEGGSNGGLLVGACINQRPDL-FGCALAHVG 651 (789)
Q Consensus 617 ~~~i~i~G~S~GG~l~~~~~~~~pd~-f~a~v~~~p 651 (789)
.+++.++|||+||.++..++.++|+. ++.+|+..+
T Consensus 79 ~~~~~lvGhSmGG~ia~~~a~~~~~~~v~~lv~~~~ 114 (279)
T 1ei9_A 79 QQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVGG 114 (279)
T ss_dssp TTCEEEEEETTHHHHHHHHHHHCCSSCEEEEEEESC
T ss_pred cCCEEEEEECHHHHHHHHHHHHcCCcccceEEEecC
Confidence 26899999999999999999999984 888886553
No 393
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=98.40 E-value=6.9e-06 Score=91.05 Aligned_cols=161 Identities=11% Similarity=0.063 Sum_probs=96.3
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC-CcEEEEecCCCCeeEEEEEEecCCcEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS-EDILCWKDPEHPKYIFSGHVTEDGQYLV 315 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~-~~~~~~~~~~~~~~~~~~~~SpDG~~l~ 315 (789)
...++|+|++..++++.. ....|++|++.+... .....+.. +...+..+.|+|+|++++
T Consensus 234 v~~v~~~p~~~~~l~s~~------------------~dg~i~i~d~~~~~~~~~~~~~~~--~~~~v~~i~~~p~~~~~l 293 (430)
T 2xyi_A 234 VEDVAWHLLHESLFGSVA------------------DDQKLMIWDTRNNNTSKPSHTVDA--HTAEVNCLSFNPYSEFIL 293 (430)
T ss_dssp EEEEEECSSCTTEEEEEE------------------TTSEEEEEETTCSCSSSCSEEEEC--CSSCEEEEEECSSCTTEE
T ss_pred EeeeEEeCCCCCEEEEEe------------------CCCeEEEEECCCCCCCcceeEeec--CCCCeEEEEeCCCCCCEE
Confidence 478999996555555532 234689999986531 22223332 233466899999999766
Q ss_pred EEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEecCCCEEEEEECCCCCCceEEEEECCCC
Q 003878 316 MCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 394 (789)
Q Consensus 316 ~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~ 394 (789)
++... ...|.++|+.+.. .+...+........ ..|+|+|+.+++.... +..|..+|+...
T Consensus 294 ~tg~~----dg~v~vwd~~~~~------------~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~---d~~i~iwd~~~~ 354 (430)
T 2xyi_A 294 ATGSA----DKTVALWDLRNLK------------LKLHSFESHKDEIFQVQWSPHNETILASSGT---DRRLHVWDLSKI 354 (430)
T ss_dssp EEEET----TSEEEEEETTCTT------------SCSEEEECCSSCEEEEEECSSCTTEEEEEET---TSCCEEEEGGGT
T ss_pred EEEeC----CCeEEEEeCCCCC------------CCeEEeecCCCCEEEEEECCCCCCEEEEEeC---CCcEEEEeCCCC
Confidence 65543 3558999998631 12222322222222 3489999776655543 356888887652
Q ss_pred CC-----------eEEeccC-CCCceeeeEEEecCCE-EEEEEEeCCeEEEEEEECC
Q 003878 395 ND-----------WFEVIPE-AERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDLK 438 (789)
Q Consensus 395 ~~-----------~~~l~~~-~~~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl~ 438 (789)
.. ...+... .....+..+.|++++. ++++...++ .|.+|++.
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg--~i~iw~~~ 409 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDN--IMQVWQMA 409 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTS--EEEEEEEC
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCC--CEEEeEcc
Confidence 10 0122211 2234688999998655 888888887 67788876
No 394
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=98.38 E-value=8.3e-07 Score=94.44 Aligned_cols=104 Identities=16% Similarity=0.127 Sum_probs=76.5
Q ss_pred CCccEEEEEcCCCCccCC----CCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHH
Q 003878 536 GSHPCLLYGYGGFNISVT----PSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLIS 611 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~----~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~ 611 (789)
++.|.||++||..+.... ..|.. ....|.++||.|+.+|+||.|.... .....+++.+.++.+++
T Consensus 6 ~~~~~vVlvHG~~~~~~~~~~~~~w~~-l~~~L~~~G~~V~~~d~~g~g~s~~----------~~~~~~~l~~~i~~~l~ 74 (320)
T 1ys1_X 6 ATRYPIILVHGLTGTDKYAGVLEYWYG-IQEDLQQRGATVYVANLSGFQSDDG----------PNGRGEQLLAYVKTVLA 74 (320)
T ss_dssp CCSSCEEEECCTTCCSEETTTEESSTT-HHHHHHHTTCCEEECCCCSSCCSSS----------TTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCCccccchHHHHHH-HHHHHHhCCCEEEEEcCCCCCCCCC----------CCCCHHHHHHHHHHHHH
Confidence 456789999998765421 34444 3455555999999999998765321 12345666666666655
Q ss_pred cCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 612 AGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 612 ~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
. .+.+++.++|||+||+++..++.++|++++++|...+.
T Consensus 75 ~--~~~~~v~lvGHS~GG~va~~~a~~~p~~V~~lV~i~~p 113 (320)
T 1ys1_X 75 A--TGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTP 113 (320)
T ss_dssp H--HCCSCEEEEEETHHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred H--hCCCCEEEEEECHhHHHHHHHHHhChhhceEEEEECCC
Confidence 4 23468999999999999999999999999999988774
No 395
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=98.38 E-value=5.5e-07 Score=94.33 Aligned_cols=101 Identities=15% Similarity=0.148 Sum_probs=74.2
Q ss_pred CCccEEEEEcCCCCccC---CCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHc
Q 003878 536 GSHPCLLYGYGGFNISV---TPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISA 612 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~---~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~ 612 (789)
++.|.||++||..+... ...|.. ....|.++||.|+.+|+||.|... ...+++.+.++.+++.
T Consensus 5 ~~~~~vvlvHG~~~~~~~~~~~~~~~-~~~~L~~~G~~v~~~d~~g~g~s~-------------~~~~~~~~~i~~~~~~ 70 (285)
T 1ex9_A 5 QTKYPIVLAHGMLGFDNILGVDYWFG-IPSALRRDGAQVYVTEVSQLDTSE-------------VRGEQLLQQVEEIVAL 70 (285)
T ss_dssp CCSSCEEEECCTTCCSEETTEESSTT-HHHHHHHTTCCEEEECCCSSSCHH-------------HHHHHHHHHHHHHHHH
T ss_pred CCCCeEEEeCCCCCCccccccccHHH-HHHHHHhCCCEEEEEeCCCCCCch-------------hhHHHHHHHHHHHHHH
Confidence 45678999999876543 234544 345555589999999999865421 2345666666655554
Q ss_pred CCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 613 GYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 613 ~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
.+.+++.++|||+||.++..++.++|+.++++|...+.
T Consensus 71 --~~~~~v~lvGhS~GG~~a~~~a~~~p~~v~~lv~i~~p 108 (285)
T 1ex9_A 71 --SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAP 108 (285)
T ss_dssp --HCCSCEEEEEETTHHHHHHHHHHHCGGGEEEEEEESCC
T ss_pred --hCCCCEEEEEECHhHHHHHHHHHhChhheeEEEEECCC
Confidence 23468999999999999999999999999999988774
No 396
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.37 E-value=7.6e-05 Score=79.45 Aligned_cols=177 Identities=7% Similarity=-0.053 Sum_probs=106.8
Q ss_pred cEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEe
Q 003878 275 HEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVK 354 (789)
Q Consensus 275 ~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 354 (789)
..|.+++..+...... +..... ...+++++|| .|++.... ...|+++|++++. ....
T Consensus 64 ~~v~viD~~t~~~~~~--i~~~~~---p~~i~~~~~g-~lyv~~~~----~~~v~~iD~~t~~-------------~~~~ 120 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGR--ITGFTS---PRYIHFLSDE-KAYVTQIW----DYRIFIINPKTYE-------------ITGY 120 (328)
T ss_dssp TEEEEEETTTCCEEEE--EECCSS---EEEEEEEETT-EEEEEEBS----CSEEEEEETTTTE-------------EEEE
T ss_pred CEEEEEECcccEEEEE--cCCCCC---CcEEEEeCCC-eEEEEECC----CCeEEEEECCCCe-------------EEEE
Confidence 4688888876543222 222222 3467889999 56554421 3679999998742 0111
Q ss_pred eeccc------cceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCC
Q 003878 355 LIDGF------DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 428 (789)
Q Consensus 355 l~~~~------~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g 428 (789)
+..+. ......+ +++.+|+.... ....|.++|+++++ ....++.. ....++.+++++++++....+.
T Consensus 121 i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~--~~~~v~viD~~t~~-~~~~i~~g--~~p~~i~~~~dG~l~v~~~~~~ 193 (328)
T 3dsm_A 121 IECPDMDMESGSTEQMVQ--YGKYVYVNCWS--YQNRILKIDTETDK-VVDELTIG--IQPTSLVMDKYNKMWTITDGGY 193 (328)
T ss_dssp EECTTCCTTTCBCCCEEE--ETTEEEEEECT--TCCEEEEEETTTTE-EEEEEECS--SCBCCCEECTTSEEEEEBCCBC
T ss_pred EEcCCccccCCCcceEEE--ECCEEEEEcCC--CCCEEEEEECCCCe-EEEEEEcC--CCccceEEcCCCCEEEEECCCc
Confidence 11111 1111223 57788876431 23589999998876 22223322 1234677777678777655430
Q ss_pred --------eEEEEEEECCCCceeeecccCC-eeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 429 --------KYVLQIRDLKNGSLLHQLPIEI-GSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 429 --------~~~L~~~dl~tG~~~~~l~~~~-~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
...|+++|.++++..+.+..+. .....++++++++.++++- + .++.+|.++++
T Consensus 194 ~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~-~-----~v~~~d~~t~~ 255 (328)
T 3dsm_A 194 EGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWIN-N-----DIWRMPVEADR 255 (328)
T ss_dssp TTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEES-S-----SEEEEETTCSS
T ss_pred cCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEc-c-----EEEEEECCCCc
Confidence 2589999999887756666542 2355788899999887753 2 89999998885
No 397
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=98.36 E-value=0.00025 Score=78.53 Aligned_cols=257 Identities=14% Similarity=0.047 Sum_probs=150.2
Q ss_pred EeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeEEE
Q 003878 138 SVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFFYL 217 (789)
Q Consensus 138 ~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 217 (789)
.+++||++|+.+.. ..+|++||+.+++.+. .+... .+-...+. |.-.++
T Consensus 124 ~~~~~g~~l~sg~~-----dg~i~vwd~~~~~~~~-~~~~h-------~~~v~~~~------------------~~~~~l 172 (445)
T 2ovr_B 124 CLQFCGNRIVSGSD-----DNTLKVWSAVTGKCLR-TLVGH-------TGGVWSSQ------------------MRDNII 172 (445)
T ss_dssp EEEEETTEEEEEET-----TSCEEEEETTTCCEEE-ECCCC-------SSCEEEEE------------------EETTEE
T ss_pred EEEEcCCEEEEEEC-----CCcEEEEECCCCcEEE-EEcCC-------CCCEEEEE------------------ecCCEE
Confidence 46778999885432 3479999999997553 12211 01000011 112367
Q ss_pred eeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC
Q 003878 218 FSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS 287 (789)
Q Consensus 218 ~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~ 287 (789)
+++..+|+..+|.+.. ......+.| +++.|+.... ...|.++++.+...
T Consensus 173 ~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~s~s~-------------------dg~i~~wd~~~~~~ 231 (445)
T 2ovr_B 173 ISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHL--HEKRVVSGSR-------------------DATLRVWDIETGQC 231 (445)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE--ETTEEEEEET-------------------TSEEEEEESSSCCE
T ss_pred EEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEe--cCCEEEEEeC-------------------CCEEEEEECCCCcE
Confidence 8888999999998754 111234455 4566665432 24688899876532
Q ss_pred CcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEe
Q 003878 288 EDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIA 367 (789)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s 367 (789)
...+... ...+..+.+ ||++++....+ ..|.++|+.++. ....+..... ....+.
T Consensus 232 --~~~~~~~--~~~v~~~~~--~~~~l~~~~~d-----g~i~iwd~~~~~-------------~~~~~~~~~~-~v~~~~ 286 (445)
T 2ovr_B 232 --LHVLMGH--VAAVRCVQY--DGRRVVSGAYD-----FMVKVWDPETET-------------CLHTLQGHTN-RVYSLQ 286 (445)
T ss_dssp --EEEEECC--SSCEEEEEE--CSSCEEEEETT-----SCEEEEEGGGTE-------------EEEEECCCSS-CEEEEE
T ss_pred --EEEEcCC--cccEEEEEE--CCCEEEEEcCC-----CEEEEEECCCCc-------------EeEEecCCCC-ceEEEE
Confidence 2233332 233445555 88888776543 348888887631 1222221111 122233
Q ss_pred cCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecc
Q 003878 368 NDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP 447 (789)
Q Consensus 368 ~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~ 447 (789)
.+++.++..+. +..|..+|+.+++....+..+. ..+..+.+.+ .++++...++ .|.+||+.+++....+.
T Consensus 287 ~~~~~l~~~~~----d~~i~i~d~~~~~~~~~~~~~~--~~v~~~~~~~--~~l~~~~~dg--~i~vwd~~~~~~~~~~~ 356 (445)
T 2ovr_B 287 FDGIHVVSGSL----DTSIRVWDVETGNCIHTLTGHQ--SLTSGMELKD--NILVSGNADS--TVKIWDIKTGQCLQTLQ 356 (445)
T ss_dssp ECSSEEEEEET----TSCEEEEETTTCCEEEEECCCC--SCEEEEEEET--TEEEEEETTS--CEEEEETTTCCEEEEEC
T ss_pred ECCCEEEEEeC----CCeEEEEECCCCCEEEEEcCCc--ccEEEEEEeC--CEEEEEeCCC--eEEEEECCCCcEEEEEc
Confidence 47887775443 3568999998876334443333 4566677654 4566666676 68999998888766665
Q ss_pred c---CCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 448 I---EIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 448 ~---~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
. ....+..++++ ++.++.. + .-+.+..||+.+++
T Consensus 357 ~~~~~~~~v~~~~~~--~~~l~s~-~---~dg~v~iwd~~~~~ 393 (445)
T 2ovr_B 357 GPNKHQSAVTCLQFN--KNFVITS-S---DDGTVKLWDLKTGE 393 (445)
T ss_dssp STTSCSSCEEEEEEC--SSEEEEE-E---TTSEEEEEETTTCC
T ss_pred cCCCCCCCEEEEEEC--CCEEEEE-e---CCCeEEEEECCCCc
Confidence 4 34556666664 4544433 2 34689999999886
No 398
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP, serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo sapiens}
Probab=98.35 E-value=1.6e-06 Score=96.09 Aligned_cols=113 Identities=19% Similarity=0.087 Sum_probs=75.0
Q ss_pred CccEEEEEcCCCCccCCC-CCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcc---ccc----CCcchHHHHHHHHHH
Q 003878 537 SHPCLLYGYGGFNISVTP-SFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGG---ALA----KKQNCFDDFISASEY 608 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~~-~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~---~~~----~~~~~~~D~~~~~~~ 608 (789)
..|+|| .|||.+..... ........+..+.|+.|++.|.||.|...+. .... ... .-....+|+...+++
T Consensus 38 g~Pi~l-~~Ggeg~~~~~~~~~g~~~~lA~~~~~~Vi~~DhRg~G~S~p~-~~~~~~~~~~l~~lt~~q~~~Dl~~~~~~ 115 (446)
T 3n2z_B 38 GGSILF-YTGNEGDIIWFCNNTGFMWDVAEELKAMLVFAEHRYYGESLPF-GDNSFKDSRHLNFLTSEQALADFAELIKH 115 (446)
T ss_dssp TCEEEE-EECCSSCHHHHHHHCHHHHHHHHHHTEEEEEECCTTSTTCCTT-GGGGGSCTTTSTTCSHHHHHHHHHHHHHH
T ss_pred CCCEEE-EeCCCCcchhhhhcccHHHHHHHHhCCcEEEEecCCCCCCCCC-CccccccchhhccCCHHHHHHHHHHHHHH
Confidence 457655 48887753221 0112234555557899999999998865321 0100 011 113356888888888
Q ss_pred HHHcC-CCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCC
Q 003878 609 LISAG-YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVG 651 (789)
Q Consensus 609 L~~~~-~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p 651 (789)
|...- .....++.++|||+||.++++++.++|+++.++|+.++
T Consensus 116 l~~~~~~~~~~p~il~GhS~GG~lA~~~~~~yP~~v~g~i~ssa 159 (446)
T 3n2z_B 116 LKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASA 159 (446)
T ss_dssp HHHHSTTGGGCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETC
T ss_pred HHHhcccCCCCCEEEEEeCHHHHHHHHHHHhhhccccEEEEecc
Confidence 87651 12335899999999999999999999999999988653
No 399
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=98.34 E-value=1.1e-06 Score=92.42 Aligned_cols=119 Identities=15% Similarity=0.024 Sum_probs=79.3
Q ss_pred EEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHH
Q 003878 522 IPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDD 601 (789)
Q Consensus 522 i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D 601 (789)
+...|+.|.. .+.+..+.||++||..+... ..|...+...|.++||.|+.+|++|.|... .....++
T Consensus 50 L~~~i~~p~~-~~~~~~~pVVLvHG~~~~~~-~~w~~~l~~~L~~~Gy~V~a~DlpG~G~~~-----------~~~~~~~ 116 (316)
T 3icv_A 50 LDAGLTCQGA-SPSSVSKPILLVPGTGTTGP-QSFDSNWIPLSAQLGYTPCWISPPPFMLND-----------TQVNTEY 116 (316)
T ss_dssp HHHTEEETTB-BTTBCSSEEEEECCTTCCHH-HHHTTTHHHHHHHTTCEEEEECCTTTTCSC-----------HHHHHHH
T ss_pred HhhhEeCCCC-CCCCCCCeEEEECCCCCCcH-HHHHHHHHHHHHHCCCeEEEecCCCCCCCc-----------HHHHHHH
Confidence 3344555633 23345567889999765431 123212345666689999999999865311 1123467
Q ss_pred HHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC---CCceeEEEecCCcccc
Q 003878 602 FISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR---PDLFGCALAHVGVMDM 655 (789)
Q Consensus 602 ~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~---pd~f~a~v~~~p~~d~ 655 (789)
+.+.++.+.+. ...+++.++|||+||+++..++..+ |++++.+|+..|...-
T Consensus 117 la~~I~~l~~~--~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~G 171 (316)
T 3icv_A 117 MVNAITTLYAG--SGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKG 171 (316)
T ss_dssp HHHHHHHHHHH--TTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTC
T ss_pred HHHHHHHHHHH--hCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCCC
Confidence 77778887765 2336899999999999998777764 5899999998876543
No 400
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=98.34 E-value=4e-05 Score=81.44 Aligned_cols=204 Identities=11% Similarity=0.022 Sum_probs=124.0
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecC---CcE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTED---GQY 313 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpD---G~~ 313 (789)
...++|+||++.++.+.... .....|++|++.+........... ...+..+.|+|+ |++
T Consensus 21 v~~~~~~p~~~~l~~~~s~~---------------~~d~~v~iw~~~~~~~~~~~~~~~---~~~v~~~~~~~~~~~~~~ 82 (357)
T 3i2n_A 21 VFDCKWVPCSAKFVTMGNFA---------------RGTGVIQLYEIQHGDLKLLREIEK---AKPIKCGTFGATSLQQRY 82 (357)
T ss_dssp EEEEEECTTSSEEEEEEC-----------------CCCEEEEEEEECSSSEEEEEEEEE---SSCEEEEECTTCCTTTCC
T ss_pred eEEEEEcCCCceEEEecCcc---------------CCCcEEEEEeCCCCcccceeeecc---cCcEEEEEEcCCCCCCce
Confidence 57899999998888764210 023468899987654332222222 233568899999 688
Q ss_pred EEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeE-------EEecCCCEEEEEECCCCCCceE
Q 003878 314 LVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYE-------VIANDDTVFTFLTNKDAPKYKI 386 (789)
Q Consensus 314 l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~-------~~s~dG~~l~~~tn~~~~~~~L 386 (789)
|+....+ ..|.++++.++. .+...+......... .|+++++.|+..+. ++.|
T Consensus 83 l~~~~~d-----g~i~iwd~~~~~------------~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~----d~~i 141 (357)
T 3i2n_A 83 LATGDFG-----GNLHIWNLEAPE------------MPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSR----DGTV 141 (357)
T ss_dssp EEEEETT-----SCEEEECTTSCS------------SCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEET----TSCE
T ss_pred EEEecCC-----CeEEEEeCCCCC------------ccEEEEEecccceEEEeeccccccCCCccEEEEEeC----CCeE
Confidence 8766533 448889988742 012222211111111 24688888775443 3578
Q ss_pred EEEECCCCC-CeEEeccCCC--CceeeeEE----EecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecc
Q 003878 387 IRVDLKEPN-DWFEVIPEAE--RDVLESAT----AVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISAR 459 (789)
Q Consensus 387 ~~~dl~~~~-~~~~l~~~~~--~~~i~~v~----~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s 459 (789)
..+|+.+++ ....+.++.. ...+..+. +++++.++++...++ .|++||+.+++.. ........+..+.++
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~--~i~i~d~~~~~~~-~~~~~~~~v~~~~~~ 218 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNG--DIKLFDLRNMALR-WETNIKNGVCSLEFD 218 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTS--EEEEEETTTTEEE-EEEECSSCEEEEEES
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCC--eEEEEECccCcee-eecCCCCceEEEEcC
Confidence 899998765 3444433332 22455665 445567777777776 7999999877653 222234567788888
Q ss_pred c---CCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 460 R---EDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 460 ~---d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
| +++.++... .-+.++.||+.++
T Consensus 219 ~~~~~~~~l~~~~----~dg~i~i~d~~~~ 244 (357)
T 3i2n_A 219 RKDISMNKLVATS----LEGKFHVFDMRTQ 244 (357)
T ss_dssp CSSSSCCEEEEEE----STTEEEEEEEEEE
T ss_pred CCCCCCCEEEEEC----CCCeEEEEeCcCC
Confidence 8 788766543 3468888988665
No 401
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.33 E-value=6.8e-05 Score=82.56 Aligned_cols=78 Identities=10% Similarity=0.156 Sum_probs=52.3
Q ss_pred EEecCCCEEEEEECCC------CCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCE-EEEEEEeCCeEEEEEEEC
Q 003878 365 VIANDDTVFTFLTNKD------APKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSDVKYVLQIRDL 437 (789)
Q Consensus 365 ~~s~dG~~l~~~tn~~------~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~-lv~~~~~~g~~~L~~~dl 437 (789)
.+++||+++|+..... .+...|.++|+++.+....+ +-. ..-.++.++++++ ++++.... ...|.++|+
T Consensus 325 a~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I-~vg--~~P~gia~spDg~~~lyv~n~~-s~~VsVID~ 400 (426)
T 3c75_H 325 AYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKI-ELG--HEIDSINVSQDAEPLLYALSAG-TQTLHIYDA 400 (426)
T ss_dssp EEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEE-EEE--EEECEEEECCSSSCEEEEEETT-TTEEEEEET
T ss_pred EEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEE-ECC--CCcCeEEEccCCCEEEEEEcCC-CCeEEEEEC
Confidence 4789999999864311 12357999999988733333 221 2345788888655 66666532 247999999
Q ss_pred CCCceeeec
Q 003878 438 KNGSLLHQL 446 (789)
Q Consensus 438 ~tG~~~~~l 446 (789)
++++.++.|
T Consensus 401 ~t~kvv~tI 409 (426)
T 3c75_H 401 ATGEELRSV 409 (426)
T ss_dssp TTCCEEEEE
T ss_pred CCCCEEEEe
Confidence 999887776
No 402
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=98.33 E-value=8.6e-05 Score=77.57 Aligned_cols=202 Identities=12% Similarity=-0.006 Sum_probs=120.2
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecC--CcEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTED--GQYL 314 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpD--G~~l 314 (789)
...++|+|||+.|+-...+ ..|++|++.+...+....+.. +...+..+.|+|+ |++|
T Consensus 12 V~~~~~s~~g~~las~s~D-------------------~~v~iw~~~~~~~~~~~~l~g--H~~~V~~v~~s~~~~g~~l 70 (297)
T 2pm7_B 12 IHDAVMDYYGKRMATCSSD-------------------KTIKIFEVEGETHKLIDTLTG--HEGPVWRVDWAHPKFGTIL 70 (297)
T ss_dssp EEEEEECTTSSEEEEEETT-------------------SCEEEEEBCSSCBCCCEEECC--CSSCEEEEEECCGGGCSEE
T ss_pred eEEEEECCCCCEEEEEeCC-------------------CEEEEEecCCCCcEEEEEEcc--ccCCeEEEEecCCCcCCEE
Confidence 4688999999999866543 248888886533232333433 3344668899864 8887
Q ss_pred EEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccc-eeEEEecC--CCEEEEEECCCCCCceEEEEEC
Q 003878 315 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIAND--DTVFTFLTNKDAPKYKIIRVDL 391 (789)
Q Consensus 315 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~d--G~~l~~~tn~~~~~~~L~~~dl 391 (789)
+-.+. ...|.++|+.++. ......+...... .-..|+|+ |..|+..+. +..|..+|+
T Consensus 71 ~s~s~-----D~~v~iWd~~~~~-----------~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~----d~~v~~wd~ 130 (297)
T 2pm7_B 71 ASCSY-----DGKVMIWKEENGR-----------WSQIAVHAVHSASVNSVQWAPHEYGPMLLVASS----DGKVSVVEF 130 (297)
T ss_dssp EEEET-----TTEEEEEEBSSSC-----------BCCCEEECCCSSCEEEEEECCGGGCSEEEEEET----TSEEEEEEB
T ss_pred EEEcC-----CCEEEEEEcCCCc-----------eEEEEEeecCCCceeEEEeCcCCCCcEEEEEEC----CCcEEEEEe
Confidence 75543 2458888987642 0111112111111 12348887 777665433 357888888
Q ss_pred CCCCC--eEEeccCCCCceeeeEEEecC-------------CEEEEEEEeCCeEEEEEEECCCCc----eeeecccCCee
Q 003878 392 KEPND--WFEVIPEAERDVLESATAVNL-------------NQMIVSYLSDVKYVLQIRDLKNGS----LLHQLPIEIGS 452 (789)
Q Consensus 392 ~~~~~--~~~l~~~~~~~~i~~v~~~~~-------------~~lv~~~~~~g~~~L~~~dl~tG~----~~~~l~~~~~~ 452 (789)
.++.. ...+..+. ..+..+.++++ +.++++...++ .|++||+.+++ ....+..+...
T Consensus 131 ~~~~~~~~~~~~~h~--~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~--~v~lwd~~~~~~~~~~~~~l~~H~~~ 206 (297)
T 2pm7_B 131 KENGTTSPIIIDAHA--IGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN--LVKIWKYNSDAQTYVLESTLEGHSDW 206 (297)
T ss_dssp CSSSCBCCEEEECCS--SCEEEEEECCCC------------CCEEEEEETTS--CEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred cCCCceeeeeeeccc--CccceEeecCCcccccccCCCCCCcceEEEEcCCC--cEEEEEEcCCCceEEEEEEecCCCCc
Confidence 76531 12232333 45677888763 24777888887 57778876554 22344444667
Q ss_pred EEEeecccCC--cEEEEEEcCCCCCcEEEEEECCCC
Q 003878 453 VNAISARRED--SVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 453 v~~~s~s~d~--~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
|..++++|++ ..++++.+ .-.++..||+.++
T Consensus 207 V~~v~~sp~~~~~~~las~s---~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 207 VRDVAWSPTVLLRSYMASVS---QDRTCIIWTQDNE 239 (297)
T ss_dssp EEEEEECCCCSSSEEEEEEE---TTSCEEEEEESST
T ss_pred eEEEEECCCCCCceEEEEEE---CCCcEEEEEeCCC
Confidence 8889999985 34444443 2356778887654
No 403
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.32 E-value=0.00026 Score=81.21 Aligned_cols=212 Identities=10% Similarity=0.036 Sum_probs=118.1
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...+..|+++..+++.... ..+|++.+..+... ..+...+. ..+...+.|+|||++++.
T Consensus 300 va~i~~s~~~~~~vv~~~~------------------~g~v~~vd~~~~~~--~~v~~i~~-~~~~~d~~~~pdgr~~~v 358 (567)
T 1qks_A 300 VAAILASHYRPEFIVNVKE------------------TGKILLVDYTDLNN--LKTTEISA-ERFLHDGGLDGSHRYFIT 358 (567)
T ss_dssp EEEEEECSSSSEEEEEETT------------------TTEEEEEETTCSSE--EEEEEEEC-CSSEEEEEECTTSCEEEE
T ss_pred eEEEEEcCCCCEEEEEecC------------------CCeEEEEecCCCcc--ceeeeeec-cccccCceECCCCCEEEE
Confidence 3567778888877766422 23577777654321 11222111 123446789999999987
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEee-ec--cccceeEEEecCCCEEEEEECCCCCCceEEEEECCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL-ID--GFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE 393 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l-~~--~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~ 393 (789)
.... .+.|.++|+++++ ......+ -. ........+.|+++.++++++.+ ...|.+++.+.
T Consensus 359 a~~~----sn~V~ViD~~t~k-----------l~~~i~vgg~~Phpg~g~~~~~p~~g~v~~t~~~g--~~~Vsvid~~~ 421 (567)
T 1qks_A 359 AANA----RNKLVVIDTKEGK-----------LVAIEDTGGQTPHPGRGANFVHPTFGPVWATSHMG--DDSVALIGTDP 421 (567)
T ss_dssp EEGG----GTEEEEEETTTTE-----------EEEEEECSSSSBCCTTCEEEEETTTEEEEEEEBSS--SSEEEEEECCT
T ss_pred EeCC----CCeEEEEECCCCc-----------EEEEEeccCcCCCCccceeeECCCCCcEEEeCCCC--CCeEEEecCCC
Confidence 6632 4679999998852 0001111 00 00011123577777887766553 35688888876
Q ss_pred CC----CeEEe--ccCCCCceeeeEEEecC-CEEEEEEEeCC----eEEEEEEECCCC-----cee-eecc------cC-
Q 003878 394 PN----DWFEV--IPEAERDVLESATAVNL-NQMIVSYLSDV----KYVLQIRDLKNG-----SLL-HQLP------IE- 449 (789)
Q Consensus 394 ~~----~~~~l--~~~~~~~~i~~v~~~~~-~~lv~~~~~~g----~~~L~~~dl~tG-----~~~-~~l~------~~- 449 (789)
.+ .|+.+ ++...... ..+..+++ .++++...-+. ...|.++|+++. ... +.+. ++
T Consensus 422 ~~~~~~~~kvv~~i~~~g~g~-~~i~~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~ 500 (567)
T 1qks_A 422 EGHPDNAWKILDSFPALGGGS-LFIKTHPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITE 500 (567)
T ss_dssp TTCTTTBTSEEEEEECSCSCC-CCEECCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCS
T ss_pred CCCccccCEEEEEEecCCCCC-EEEEeCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCC
Confidence 32 13322 12111111 12445564 45665442221 237899998755 211 2232 11
Q ss_pred -CeeEEEeecccCCcEEEEEE-cCCCCCcEEEEEECCCCC
Q 003878 450 -IGSVNAISARREDSVVFISF-TSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 450 -~~~v~~~s~s~d~~~l~~~~-ss~~~P~~ly~~dl~tg~ 487 (789)
...+..+.++++|++++++. +.-...+.|..+|.+|++
T Consensus 501 ~~~~~~~~~~~~~G~~~~~s~~~~~~~~~~i~v~D~~t~~ 540 (567)
T 1qks_A 501 GQPRVVQGEFNKDGTEVWFSVWNGKDQESALVVVDDKTLE 540 (567)
T ss_dssp SCCEEEEEEECTTSSEEEEEEECCTTSCCEEEEEETTTTE
T ss_pred CCcceEeeeECCCCCEEEEEeecCCCCCCcEEEEECCCce
Confidence 22455678999999999975 333467899999998885
No 404
>2cb9_A Fengycin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha/beta- hydrolases, catalytic triade, hydrolase; 1.8A {Bacillus subtilis} PDB: 2cbg_A*
Probab=98.32 E-value=4.1e-06 Score=85.35 Aligned_cols=91 Identities=10% Similarity=-0.051 Sum_probs=62.7
Q ss_pred CccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCC
Q 003878 537 SHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQ 616 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d 616 (789)
..|.|+++||..+.. ..|.. +...|. .++.|+.++++|.+. ..+|+.+.++.+. .
T Consensus 21 ~~~~l~~~hg~~~~~--~~~~~-~~~~l~-~~~~v~~~d~~g~~~----------------~~~~~~~~i~~~~-----~ 75 (244)
T 2cb9_A 21 GGKNLFCFPPISGFG--IYFKD-LALQLN-HKAAVYGFHFIEEDS----------------RIEQYVSRITEIQ-----P 75 (244)
T ss_dssp CSSEEEEECCTTCCG--GGGHH-HHHHTT-TTSEEEEECCCCSTT----------------HHHHHHHHHHHHC-----S
T ss_pred CCCCEEEECCCCCCH--HHHHH-HHHHhC-CCceEEEEcCCCHHH----------------HHHHHHHHHHHhC-----C
Confidence 457889999976653 23333 445566 789999999997421 2355555554432 1
Q ss_pred CCcEEEEeeChHHHHHHHHHHhC---CCceeEEEecCCc
Q 003878 617 SRKLCIEGGSNGGLLVGACINQR---PDLFGCALAHVGV 652 (789)
Q Consensus 617 ~~~i~i~G~S~GG~l~~~~~~~~---pd~f~a~v~~~p~ 652 (789)
..++.++|+|+||.++..++.+. ++...++|...+.
T Consensus 76 ~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~lvl~~~~ 114 (244)
T 2cb9_A 76 EGPYVLLGYSAGGNLAFEVVQAMEQKGLEVSDFIIVDAY 114 (244)
T ss_dssp SSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCCEEEEEECHhHHHHHHHHHHHHHcCCCccEEEEEcCC
Confidence 25799999999999999888764 5678777776554
No 405
>1hpl_A Lipase; hydrolase(carboxylic esterase); 2.30A {Equus caballus} SCOP: b.12.1.2 c.69.1.19
Probab=98.31 E-value=8.1e-07 Score=98.63 Aligned_cols=113 Identities=10% Similarity=-0.011 Sum_probs=76.9
Q ss_pred CCCccEEEEEcCCCCccCCCCCCHH-HHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcC
Q 003878 535 DGSHPCLLYGYGGFNISVTPSFSVS-RTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG 613 (789)
Q Consensus 535 ~~~~P~ll~~hGg~~~~~~~~~~~~-~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~ 613 (789)
+...|++|++||..+.. ...|... ...+++..+|.|+++|+||+|.... ..+. ..-...-+|+.+.+++|.++.
T Consensus 66 ~~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~y--~~~~--~~~~~v~~~la~ll~~L~~~~ 140 (449)
T 1hpl_A 66 NTGRKTRFIIHGFIDKG-EESWLSTMCQNMFKVESVNCICVDWKSGSRTAY--SQAS--QNVRIVGAEVAYLVGVLQSSF 140 (449)
T ss_dssp CTTSEEEEEECCCCCTT-CTTHHHHHHHHHHHHCCEEEEEEECHHHHSSCH--HHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEecCCCCC-CccHHHHHHHHHHhcCCeEEEEEeCCcccCCcc--HHHH--HHHHHHHHHHHHHHHHHHHhc
Confidence 45679999999965432 3344432 2345554799999999999765321 1110 000112246666777776442
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 614 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 614 ~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
..+.+++.++|||+||.+++.++.++|++++.++...|.
T Consensus 141 g~~~~~v~LIGhSlGg~vA~~~a~~~p~~v~~iv~Ldpa 179 (449)
T 1hpl_A 141 DYSPSNVHIIGHSLGSHAAGEAGRRTNGAVGRITGLDPA 179 (449)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHHTTTCSSEEEEESCB
T ss_pred CCCcccEEEEEECHhHHHHHHHHHhcchhcceeeccCcc
Confidence 346789999999999999999999999999999877664
No 406
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=98.31 E-value=7.9e-05 Score=79.00 Aligned_cols=153 Identities=14% Similarity=0.123 Sum_probs=86.7
Q ss_pred EEEec---CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc---cce-eEEEecCCCEEEEEE
Q 003878 305 GHVTE---DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF---DAQ-YEVIANDDTVFTFLT 377 (789)
Q Consensus 305 ~~~Sp---DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~---~~~-~~~~s~dG~~l~~~t 377 (789)
+++|| ||..|+-.+. ...|.++|++++. .+..+..+. ... ...|+|||+.++..+
T Consensus 184 l~fs~~~g~~~~LaSgS~-----D~TIkIWDl~TGk-------------~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s 245 (356)
T 2w18_A 184 LTFAEVQGMQEALLGTTI-----MNNIVIWNLKTGQ-------------LLKKMHIDDSYQASVCHKAYSEMGLLFIVLS 245 (356)
T ss_dssp EEEEEEETSTTEEEEEET-----TSEEEEEETTTCC-------------EEEEEECCC---CCCEEEEEEETTEEEEEEC
T ss_pred EEeeccCCCCceEEEecC-----CCcEEEEECCCCc-------------EEEEEcCCCcceeeeEEEEECCCCCEEEEec
Confidence 56666 6677765443 3558999999853 123332211 011 124899998776544
Q ss_pred CC--------CCCCceEEEEECCCCCCeEEe---ccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeec
Q 003878 378 NK--------DAPKYKIIRVDLKEPNDWFEV---IPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL 446 (789)
Q Consensus 378 n~--------~~~~~~L~~~dl~~~~~~~~l---~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l 446 (789)
+. +..+..|..+|..++.....+ +|......+.+.... +.++++...|+ .|++||+.+|+.+..+
T Consensus 246 ~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~Dg--TIkIWDl~tGk~l~tL 321 (356)
T 2w18_A 246 HPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSG--TIAIWDLLLGQCTALL 321 (356)
T ss_dssp ------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTS--CEEEEETTTCSEEEEE
T ss_pred cCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccC--CCEEEEEcCCC--cEEEEECCCCcEEEEe
Confidence 21 234577888898877522222 132211112122222 45677777776 7999999999887777
Q ss_pred ccCCe-eEEEeecccCCcEEEEEEcCCCCCcEEEEEEC
Q 003878 447 PIEIG-SVNAISARREDSVVFISFTSFLIPGIVYQCNL 483 (789)
Q Consensus 447 ~~~~~-~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl 483 (789)
..+.. .+..++++||++.++ +. + .-.++++||+
T Consensus 322 ~gH~~~vvs~vafSPDG~~La-SG-S--~D~TIklWd~ 355 (356)
T 2w18_A 322 PPVSDQHWSFVKWSGTDSHLL-AG-Q--KDGNIFVYHY 355 (356)
T ss_dssp CCC--CCCCEEEECSSSSEEE-EE-C--TTSCEEEEEE
T ss_pred cCCCCCeEEEEEECCCCCEEE-EE-E--CCCcEEEecC
Confidence 64433 344578999998665 32 2 3456777664
No 407
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=98.30 E-value=1.6e-05 Score=90.54 Aligned_cols=179 Identities=9% Similarity=0.035 Sum_probs=105.0
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEE--EEecCC-cE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSG--HVTEDG-QY 313 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~--~~SpDG-~~ 313 (789)
..+++|+|++ .|+.... ...|.+|++.++... ...+... ...+.++ .++|+| +.
T Consensus 269 v~sv~~s~~~-~lasgs~-------------------DgtV~lWD~~~~~~~-~~~~~~H--~~~V~sv~~~~s~~g~~~ 325 (524)
T 2j04_B 269 ITTFDFLSPT-TVVCGFK-------------------NGFVAEFDLTDPEVP-SFYDQVH--DSYILSVSTAYSDFEDTV 325 (524)
T ss_dssp EEEEEESSSS-EEEEEET-------------------TSEEEEEETTBCSSC-SEEEECS--SSCEEEEEEECCTTSCCE
T ss_pred EEEEEecCCC-eEEEEeC-------------------CCEEEEEECCCCCCc-eEEeecc--cccEEEEEEEcCCCCCeE
Confidence 5789999875 5654432 246899999765322 2233333 3345566 578998 55
Q ss_pred EEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc---cceeEEEecCCCEEEEEECCCCCCceEEEEE
Q 003878 314 LVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF---DAQYEVIANDDTVFTFLTNKDAPKYKIIRVD 390 (789)
Q Consensus 314 l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~d 390 (789)
|+-.+. ...|.++|+.++. ....+.... ......|+|+|+.|+. +. .+..|..+|
T Consensus 326 laS~S~-----D~tvklWD~~~~~-------------~~~~~~~~~~~~~v~~v~fsp~~~~l~s-~~---~d~tv~lwd 383 (524)
T 2j04_B 326 VSTVAV-----DGYFYIFNPKDIA-------------TTKTTVSRFRGSNLVPVVYCPQIYSYIY-SD---GASSLRAVP 383 (524)
T ss_dssp EEEEET-----TSEEEEECGGGHH-------------HHCEEEEECSCCSCCCEEEETTTTEEEE-EC---SSSEEEEEE
T ss_pred EEEecc-----CCeEEEEECCCCC-------------cccccccccccCcccceEeCCCcCeEEE-eC---CCCcEEEEE
Confidence 554332 3458888987631 111111111 1112458999987553 22 234688899
Q ss_pred CCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-----CeeEEEeecccCCcEE
Q 003878 391 LKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-----IGSVNAISARREDSVV 465 (789)
Q Consensus 391 l~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~-----~~~v~~~s~s~d~~~l 465 (789)
+.++.....+..+. ..+.++++++++.++++...|+ .|++|++.. +........ ...+..++++++++.+
T Consensus 384 ~~~~~~~~~l~gH~--~~V~sva~Sp~g~~l~Sgs~Dg--tv~lwd~~~-~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~ 458 (524)
T 2j04_B 384 SRAAFAVHPLVSRE--TTITAIGVSRLHPMVLAGSADG--SLIITNAAR-RLLHGIKNSSATQKSLRLWKWDYSIKDDKY 458 (524)
T ss_dssp TTCTTCCEEEEECS--SCEEEEECCSSCCBCEEEETTT--EEECCBSCS-STTTCC------CCCCEEEECBCCSSSCEE
T ss_pred CcccccceeeecCC--CceEEEEeCCCCCeEEEEECCC--EEEEEechH-hhccccccCccceeeeEEEEeccCCCCCeE
Confidence 98765345555554 5678999999777888888888 688888863 221111100 1124467788888744
No 408
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=98.30 E-value=5.8e-06 Score=90.54 Aligned_cols=50 Identities=8% Similarity=-0.129 Sum_probs=35.9
Q ss_pred CceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEEC
Q 003878 383 KYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDL 437 (789)
Q Consensus 383 ~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl 437 (789)
++.|..+|+.+++....+..+. ..+.+++|+++++.+++..++| +.++.+
T Consensus 338 Dg~V~lwd~~~~~~~~~~~~~~--~~V~svafspdG~~LA~as~~G---v~lvrL 387 (393)
T 4gq1_A 338 HGLIQLINTYEKDSNSIPIQLG--MPIVDFCWHQDGSHLAIATEGS---VLLTRL 387 (393)
T ss_dssp TTEEEEEETTCTTCCEEEEECS--SCEEEEEECTTSSEEEEEESSE---EEEEEE
T ss_pred CCEEEEEECCCCcEEEEecCCC--CcEEEEEEcCCCCEEEEEeCCC---eEEEEE
Confidence 5789999998876344444444 5688999999888888888776 444444
No 409
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=98.29 E-value=0.00051 Score=71.19 Aligned_cols=214 Identities=12% Similarity=0.066 Sum_probs=133.1
Q ss_pred EEeeeccccceeeeeeec----------ccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCC
Q 003878 216 YLFSLVKSTIYSFWSVVS----------QFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK 285 (789)
Q Consensus 216 ~~~~s~~~g~~~l~~~~~----------~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~ 285 (789)
+++++..+|...+|.+.. .-....++|+||++.|+....+ ..+..+++...
T Consensus 31 ~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d-------------------g~i~~~~~~~~ 91 (313)
T 3odt_A 31 KVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKD-------------------TMINGVPLFAT 91 (313)
T ss_dssp EEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETT-------------------SCEEEEETTCC
T ss_pred EEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCC-------------------CeEEEEEeeec
Confidence 577888999999998755 2224678999999999876543 23677777544
Q ss_pred CCCc-EEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-
Q 003878 286 QSED-ILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY- 363 (789)
Q Consensus 286 ~~~~-~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~- 363 (789)
.... ...+.. +...+..+.+ +++.++.... ...|.++|... ....+........
T Consensus 92 ~~~~~~~~~~~--~~~~i~~~~~--~~~~l~~~~~-----d~~i~~~d~~~---------------~~~~~~~~~~~v~~ 147 (313)
T 3odt_A 92 SGEDPLYTLIG--HQGNVCSLSF--QDGVVISGSW-----DKTAKVWKEGS---------------LVYNLQAHNASVWD 147 (313)
T ss_dssp TTSCC-CEECC--CSSCEEEEEE--ETTEEEEEET-----TSEEEEEETTE---------------EEEEEECCSSCEEE
T ss_pred CCCCcccchhh--cccCEEEEEe--cCCEEEEEeC-----CCCEEEEcCCc---------------EEEecccCCCceeE
Confidence 3221 222222 2333556666 6777766543 34578888221 1112222111122
Q ss_pred EEEec-CCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCce
Q 003878 364 EVIAN-DDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 364 ~~~s~-dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~ 442 (789)
..+.+ +++.++..+. ++.|..+|.... ...+.. .....+..+.+++++. +++...++ .|++||+.+++.
T Consensus 148 ~~~~~~~~~~l~~~~~----d~~i~i~d~~~~--~~~~~~-~~~~~i~~~~~~~~~~-~~~~~~dg--~i~i~d~~~~~~ 217 (313)
T 3odt_A 148 AKVVSFSENKFLTASA----DKTIKLWQNDKV--IKTFSG-IHNDVVRHLAVVDDGH-FISCSNDG--LIKLVDMHTGDV 217 (313)
T ss_dssp EEEEETTTTEEEEEET----TSCEEEEETTEE--EEEECS-SCSSCEEEEEEEETTE-EEEEETTS--EEEEEETTTCCE
T ss_pred EEEccCCCCEEEEEEC----CCCEEEEecCce--EEEEec-cCcccEEEEEEcCCCe-EEEccCCC--eEEEEECCchhh
Confidence 23555 7887776543 356888884322 233332 2235678899988666 66677776 799999998887
Q ss_pred eeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 443 LHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 443 ~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
...+..+.+.+..+.+++++. ++ +. ..-+.++.||+.+++
T Consensus 218 ~~~~~~~~~~i~~~~~~~~~~-l~-~~---~~dg~v~iwd~~~~~ 257 (313)
T 3odt_A 218 LRTYEGHESFVYCIKLLPNGD-IV-SC---GEDRTVRIWSKENGS 257 (313)
T ss_dssp EEEEECCSSCEEEEEECTTSC-EE-EE---ETTSEEEEECTTTCC
T ss_pred hhhhhcCCceEEEEEEecCCC-EE-EE---ecCCEEEEEECCCCc
Confidence 666765667788889999884 33 22 235789999998885
No 410
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.28 E-value=0.00019 Score=74.93 Aligned_cols=160 Identities=8% Similarity=0.121 Sum_probs=94.1
Q ss_pred EEEEEecCCcEEEEEEEcC-----------CCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEEe---
Q 003878 303 FSGHVTEDGQYLVMCIEEN-----------CDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIA--- 367 (789)
Q Consensus 303 ~~~~~SpDG~~l~~~~~~~-----------~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s--- 367 (789)
..+.+++||+.. +..... ......|+.++.+ +. ...+..... .....++
T Consensus 120 ~~i~~d~~g~l~-v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~--------------~~~~~~~~~~~~~i~~~~~~ 183 (314)
T 1pjx_A 120 NDCAFDYEGNLW-ITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ--------------MIQVDTAFQFPNGIAVRHMN 183 (314)
T ss_dssp CEEEECTTSCEE-EEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--------------EEEEEEEESSEEEEEEEECT
T ss_pred cCEEECCCCCEE-EEecCcccccccccccccCCCCeEEEECCC-CC--------------EEEeccCCCCcceEEEeccc
Confidence 467899999754 443211 0012578888865 21 111211111 1223478
Q ss_pred -cCCCEEEEEECCCCCCceEEEEECC-CCC--CeEEe--ccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCc
Q 003878 368 -NDDTVFTFLTNKDAPKYKIIRVDLK-EPN--DWFEV--IPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGS 441 (789)
Q Consensus 368 -~dG~~l~~~tn~~~~~~~L~~~dl~-~~~--~~~~l--~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~ 441 (789)
++|+.+|+.... +.+|++++++ ++. ....+ ++........++.+.+++.+++....++ .|.+++.++|+
T Consensus 184 d~dg~~l~v~~~~---~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~--~i~~~d~~~g~ 258 (314)
T 1pjx_A 184 DGRPYQLIVAETP---TKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSS--HIEVFGPDGGQ 258 (314)
T ss_dssp TSCEEEEEEEETT---TTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTT--EEEEECTTCBS
T ss_pred CCCCCEEEEEECC---CCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCC--EEEEEcCCCCc
Confidence 888878776433 3678888875 232 00111 1211103456788887677877765554 79999998776
Q ss_pred eeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 442 LLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 442 ~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
....+..+...+..+.++++++.++++... ...++++++.+.
T Consensus 259 ~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~l~~~~~~~~ 300 (314)
T 1pjx_A 259 PKMRIRCPFEKPSNLHFKPQTKTIFVTEHE---NNAVWKFEWQRN 300 (314)
T ss_dssp CSEEEECSSSCEEEEEECTTSSEEEEEETT---TTEEEEEECSSC
T ss_pred EeEEEeCCCCCceeEEECCCCCEEEEEeCC---CCeEEEEeCCCC
Confidence 655565554556677788899877776432 368999988643
No 411
>1rp1_A Pancreatic lipase related protein 1; hydrolase, lipid degradation; HET: NAG; 2.10A {Canis lupus familiaris} SCOP: b.12.1.2 c.69.1.19 PDB: 2ppl_A
Probab=98.23 E-value=1.6e-06 Score=96.36 Aligned_cols=112 Identities=9% Similarity=0.060 Sum_probs=74.5
Q ss_pred CCCccEEEEEcCCCCccCCCCCCHHH-HHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcC
Q 003878 535 DGSHPCLLYGYGGFNISVTPSFSVSR-TILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAG 613 (789)
Q Consensus 535 ~~~~P~ll~~hGg~~~~~~~~~~~~~-~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~ 613 (789)
+...|++|++||..+.. ...|.... ..++...||.|+++|+||+|... +..+. ..-...-+|+.+.+++|.++.
T Consensus 67 ~~~~p~vvliHG~~~s~-~~~w~~~l~~~ll~~~~~~VI~vD~~g~g~s~--y~~~~--~~~~~~a~~l~~ll~~L~~~~ 141 (450)
T 1rp1_A 67 QTDKKTRFIIHGFIDKG-EENWLLDMCKNMFKVEEVNCICVDWKKGSQTS--YTQAA--NNVRVVGAQVAQMLSMLSANY 141 (450)
T ss_dssp CTTSEEEEEECCCCCTT-CTTHHHHHHHHHTTTCCEEEEEEECHHHHSSC--HHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCeEEEEccCCCCC-CcchHHHHHHHHHhcCCeEEEEEeCccccCCc--chHHH--HHHHHHHHHHHHHHHHHHHhc
Confidence 34579999999965443 22444322 34555348999999999976432 11110 001112356666777776432
Q ss_pred CCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 614 YTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 614 ~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
..+.+++.++|||+||.+++.++.++|+ ++.++...|.
T Consensus 142 g~~~~~v~LVGhSlGg~vA~~~a~~~p~-v~~iv~Ldpa 179 (450)
T 1rp1_A 142 SYSPSQVQLIGHSLGAHVAGEAGSRTPG-LGRITGLDPV 179 (450)
T ss_dssp CCCGGGEEEEEETHHHHHHHHHHHTSTT-CCEEEEESCC
T ss_pred CCChhhEEEEEECHhHHHHHHHHHhcCC-cccccccCcc
Confidence 3467899999999999999999999999 8888876554
No 412
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=98.22 E-value=5.6e-05 Score=80.49 Aligned_cols=220 Identities=11% Similarity=0.029 Sum_probs=129.3
Q ss_pred EEEeeeccccceeeeeeec-----c----------cccceEEEEeC----CcEEEEEEccCCCCCCCCCCCccccCCccc
Q 003878 215 FYLFSLVKSTIYSFWSVVS-----Q----------FKFSSIAWTHD----SKGFFYSRYPAPKEGKDMDAGTETDSNLYH 275 (789)
Q Consensus 215 ~~~~~s~~~g~~~l~~~~~-----~----------~~~~~~~wspD----g~~i~y~~~~~~~~~~~~~~~~~~~~~~~~ 275 (789)
..++.+..+|...||.+.. . -....++|+|| |+.|+.... ..
T Consensus 35 ~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~-------------------dg 95 (366)
T 3k26_A 35 PLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGS-------------------RG 95 (366)
T ss_dssp CEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEET-------------------TC
T ss_pred ceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecC-------------------CC
Confidence 4566777777888888774 1 12467899999 555655432 23
Q ss_pred EEEEEECCCCCCCcEEEEecCCCCeeEEEEEEec-CCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEe
Q 003878 276 EFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE-DGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVK 354 (789)
Q Consensus 276 ~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 354 (789)
.|.+|++.+.. .+..+.. +...+..+.|+| +++.|+....+ ..|+++|+.++. ....
T Consensus 96 ~i~v~d~~~~~--~~~~~~~--~~~~i~~~~~~~~~~~~l~s~~~d-----g~i~iwd~~~~~-------------~~~~ 153 (366)
T 3k26_A 96 IIRIINPITMQ--CIKHYVG--HGNAINELKFHPRDPNLLLSVSKD-----HALRLWNIQTDT-------------LVAI 153 (366)
T ss_dssp EEEEECTTTCC--EEEEEES--CCSCEEEEEECSSCTTEEEEEETT-----SCEEEEETTTTE-------------EEEE
T ss_pred EEEEEEchhce--EeeeecC--CCCcEEEEEECCCCCCEEEEEeCC-----CeEEEEEeecCe-------------EEEE
Confidence 68888887643 2333333 234467899999 88888766543 348899998742 1111
Q ss_pred e---eccccce-eEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEec--------------------------cCC
Q 003878 355 L---IDGFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVI--------------------------PEA 404 (789)
Q Consensus 355 l---~~~~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~--------------------------~~~ 404 (789)
+ ....... ...|+|+|+.|+..+. ++.|..+|+.+++....+. ...
T Consensus 154 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~----dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (366)
T 3k26_A 154 FGGVEGHRDEVLSADYDLLGEKIMSCGM----DHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDI 229 (366)
T ss_dssp ECSTTSCSSCEEEEEECTTSSEEEEEET----TSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSS
T ss_pred ecccccccCceeEEEECCCCCEEEEecC----CCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccC
Confidence 1 1111112 2348899998876543 3578888987643100000 000
Q ss_pred CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCce--------------eeecccCCeeEEEeecccC--CcEEEEE
Q 003878 405 ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL--------------LHQLPIEIGSVNAISARRE--DSVVFIS 468 (789)
Q Consensus 405 ~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~--------------~~~l~~~~~~v~~~s~s~d--~~~l~~~ 468 (789)
....+..+.+.+ + ++++...++ .|.+||+.+++. ...+..+...+..+.++++ +..++..
T Consensus 230 ~~~~v~~~~~~~-~-~l~~~~~d~--~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~ 305 (366)
T 3k26_A 230 HRNYVDCVRWLG-D-LILSKSCEN--AIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALG 305 (366)
T ss_dssp CSSCCCEEEEET-T-EEEEECSSS--EEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEE
T ss_pred CcceEEEEEEcC-C-EEEEEecCC--EEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEE
Confidence 124567788874 4 555566665 688899876543 1122222233444566777 7766543
Q ss_pred EcCCCCCcEEEEEECCCCC
Q 003878 469 FTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 469 ~ss~~~P~~ly~~dl~tg~ 487 (789)
..-+.++.||+.+++
T Consensus 306 ----~~dg~i~vwd~~~~~ 320 (366)
T 3k26_A 306 ----NQVGKLYVWDLEVED 320 (366)
T ss_dssp ----CTTSCEEEEECCSSS
T ss_pred ----ecCCcEEEEECCCCC
Confidence 234689999998774
No 413
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.21 E-value=0.00019 Score=77.59 Aligned_cols=251 Identities=12% Similarity=0.025 Sum_probs=127.9
Q ss_pred EEeCCCCcEEEEEEecC-CceEEEEEEEEcCCCceecccccccccccccCccceeeeeeccccccccccccccccceeeE
Q 003878 137 VSVSEDAKYLAYALSYS-GSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFFFF 215 (789)
Q Consensus 137 ~~~SpDg~~la~~~~~~-g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~ 215 (789)
....|||+++ |..+.. .....++.++|++|++.+.. +. + +
T Consensus 38 ~~~~pd~~~v-yV~~~~~~~~~~~V~ViD~~t~~v~~~-I~-v-----------------------G------------- 78 (386)
T 3sjl_D 38 EAPAPDARRV-YVNDPAHFAAVTQQFVIDGEAGRVIGM-ID-G-----------------------G------------- 78 (386)
T ss_dssp CCCCCCTTEE-EEEECGGGCSSEEEEEEETTTTEEEEE-EE-E-----------------------C-------------
T ss_pred eccCCCCCEE-EEEcCcccCCCCEEEEEECCCCeEEEE-EE-C-----------------------C-------------
Confidence 3468999986 555543 11125899999999987642 22 1 1
Q ss_pred EEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEec
Q 003878 216 YLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD 295 (789)
Q Consensus 216 ~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~ 295 (789)
....+++||||+.+|++...... .....+...|.+++..+......+....
T Consensus 79 --------------------~~P~va~spDG~~lyVan~~~~r---------~~~G~~~~~VsviD~~t~~v~~~I~v~~ 129 (386)
T 3sjl_D 79 --------------------FLPNPVVADDGSFIAHASTVFSR---------IARGERTDYVEVFDPVTLLPTADIELPD 129 (386)
T ss_dssp --------------------SSCEEEECTTSSCEEEEEEEEEE---------TTEEEEEEEEEEECTTTCCEEEEEEETT
T ss_pred --------------------CCCcEEECCCCCEEEEEcccccc---------cccCCCCCEEEEEECCCCeEEEEEECCC
Confidence 12359999999999886421000 0000123457777777654322222211
Q ss_pred -C-----CCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-ccc-------cc
Q 003878 296 -P-----EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGF-------DA 361 (789)
Q Consensus 296 -~-----~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~~~-------~~ 361 (789)
. ..+. .+.+||||++|++..... .+.|.++|+++++ ....+. .+. ..
T Consensus 130 g~r~~~g~~P~---~~a~spDGk~lyVan~~~---~~~VsVID~~t~~-------------vv~tI~v~g~~~~~P~g~~ 190 (386)
T 3sjl_D 130 APRFLVGTYPW---MTSLTPDGKTLLFYQFSP---APAVGVVDLEGKA-------------FKRMLDVPDCYHIFPTAPD 190 (386)
T ss_dssp CCCCCBSCCGG---GEEECTTSSEEEEEECSS---SCEEEEEETTTTE-------------EEEEEECCSEEEEEEEETT
T ss_pred ccccccCCCCc---eEEEcCCCCEEEEEEcCC---CCeEEEEECCCCc-------------EEEEEECCCcceeecCCCc
Confidence 0 1122 468999999998764321 3679999998852 011110 000 01
Q ss_pred eeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEe-cCCEEEEEEEeCCeEEEEEEECCCC
Q 003878 362 QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAV-NLNQMIVSYLSDVKYVLQIRDLKNG 440 (789)
Q Consensus 362 ~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~-~~~~lv~~~~~~g~~~L~~~dl~tG 440 (789)
.+...++||+.+++..... .++.... + .++............+. +++++++... ++ +++++|+.++
T Consensus 191 ~~~~~~~DG~~~~v~~~~~---g~v~~~~--~-----~~~~~~~~~~~~~~~~~~~dG~~~~vs~-~g--~V~v~d~~~~ 257 (386)
T 3sjl_D 191 TFFMHCRDGSLAKVAFGTE---GTPEITH--T-----EVFHPEDEFLINHPAYSQKAGRLVWPTY-TG--KIHQIDLSSG 257 (386)
T ss_dssp EEEEEETTSCEEEEECCSS---SCCEEEE--C-----CCCSCTTSCBCSCCEEETTTTEEEEEBT-TS--EEEEEECTTS
T ss_pred eeEEECCCCCEEEEECCCC---CeEEEee--c-----ceeccccccccccceeEcCCCcEEEEeC-CC--EEEEEECCCC
Confidence 1123455555444432211 1121110 0 11111111111123443 4466665333 44 7999999754
Q ss_pred ce--eeecc-c------C---CeeEEEeecccCCcEEEEEEcC-----CCC-CcEEEEEECCCCC
Q 003878 441 SL--LHQLP-I------E---IGSVNAISARREDSVVFISFTS-----FLI-PGIVYQCNLKTET 487 (789)
Q Consensus 441 ~~--~~~l~-~------~---~~~v~~~s~s~d~~~l~~~~ss-----~~~-P~~ly~~dl~tg~ 487 (789)
.. ...+. + + .+....+..+++++++|+.... ... ..+++.+|+++++
T Consensus 258 ~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~k 322 (386)
T 3sjl_D 258 DAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGE 322 (386)
T ss_dssp SCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCC
T ss_pred cceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCe
Confidence 32 12222 0 0 1111124557899999987641 122 3689999999987
No 414
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=98.18 E-value=0.00056 Score=75.50 Aligned_cols=190 Identities=13% Similarity=0.114 Sum_probs=111.5
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
..++| |++.|+....+ ..|.+|++.++.. ...+.. +...+..+.++ +..++..
T Consensus 177 ~~l~~--~~~~l~sg~~d-------------------g~i~vwd~~~~~~--~~~~~~--h~~~v~~l~~~--~~~l~s~ 229 (435)
T 1p22_A 177 LCLQY--DERVIITGSSD-------------------STVRVWDVNTGEM--LNTLIH--HCEAVLHLRFN--NGMMVTC 229 (435)
T ss_dssp EEEEC--CSSEEEEEETT-------------------SCEEEEESSSCCE--EEEECC--CCSCEEEEECC--TTEEEEE
T ss_pred EEEEE--CCCEEEEEcCC-------------------CeEEEEECCCCcE--EEEEcC--CCCcEEEEEEc--CCEEEEe
Confidence 45555 78877765432 2488888876532 222332 33345566775 4566554
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCe
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW 397 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~ 397 (789)
+. ...|.++|+.++. .........+.......+..+++.++..+. ++.|..+|+.+++..
T Consensus 230 s~-----dg~i~vwd~~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~----dg~i~vwd~~~~~~~ 289 (435)
T 1p22_A 230 SK-----DRSIAVWDMASPT-----------DITLRRVLVGHRAAVNVVDFDDKYIVSASG----DRTIKVWNTSTCEFV 289 (435)
T ss_dssp ET-----TSCEEEEECSSSS-----------CCEEEEEECCCSSCEEEEEEETTEEEEEET----TSEEEEEETTTCCEE
T ss_pred eC-----CCcEEEEeCCCCC-----------CceeeeEecCCCCcEEEEEeCCCEEEEEeC----CCeEEEEECCcCcEE
Confidence 43 2448889988742 111111222222222223447887775543 467999999887633
Q ss_pred EEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcE
Q 003878 398 FEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGI 477 (789)
Q Consensus 398 ~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ 477 (789)
..+..+. ..+..+.+. +.++++...++ .|.+||+.+|+....+......+..+.+ ++..++... .-+.
T Consensus 290 ~~~~~~~--~~v~~~~~~--~~~l~~g~~dg--~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~----~dg~ 357 (435)
T 1p22_A 290 RTLNGHK--RGIACLQYR--DRLVVSGSSDN--TIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGA----YDGK 357 (435)
T ss_dssp EEEECCS--SCEEEEEEE--TTEEEEEETTS--CEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEE----TTSC
T ss_pred EEEcCCC--CcEEEEEeC--CCEEEEEeCCC--eEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEe----CCCc
Confidence 3443333 456677774 35666666676 6899999988876677655666766666 566554332 2367
Q ss_pred EEEEECCCC
Q 003878 478 VYQCNLKTE 486 (789)
Q Consensus 478 ly~~dl~tg 486 (789)
+..||+.++
T Consensus 358 i~vwd~~~~ 366 (435)
T 1p22_A 358 IKVWDLVAA 366 (435)
T ss_dssp EEEEEHHHH
T ss_pred EEEEECCCC
Confidence 888887654
No 415
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=98.17 E-value=0.00064 Score=72.08 Aligned_cols=202 Identities=9% Similarity=0.054 Sum_probs=109.8
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEec-------CCCCeeEEEEEEecC
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD-------PEHPKYIFSGHVTED 310 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~-------~~~~~~~~~~~~SpD 310 (789)
.+++++|||+ ||++.. ...+|++++...... .+..+.. ...-....+++++|+
T Consensus 94 ~gia~d~~g~-l~v~d~------------------~~~~v~~~~~~g~~~-~~~~~~~~~~~g~~~~~~~~P~~ia~~~~ 153 (329)
T 3fvz_A 94 HGLSIDTDGN-YWVTDV------------------ALHQVFKLDPHSKEG-PLLILGRSMQPGSDQNHFCQPTDVAVEPS 153 (329)
T ss_dssp EEEEECTTSC-EEEEET------------------TTTEEEEECTTCSSC-CSEEESBTTBCCCSTTCCSSEEEEEECTT
T ss_pred eEEEECCCCC-EEEEEC------------------CCCEEEEEeCCCCeE-EEEEecccCCCCCCccccCCCcEEEEeCC
Confidence 5789999998 666532 234688877654311 1222221 111123457899994
Q ss_pred CcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-c---------cc-ceeEEEecCCCEEEEEECC
Q 003878 311 GQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-G---------FD-AQYEVIANDDTVFTFLTNK 379 (789)
Q Consensus 311 G~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~---------~~-~~~~~~s~dG~~l~~~tn~ 379 (789)
+..|++.... . ...|++++.++. ....+.. + +. ..-..+++++..+|+...
T Consensus 154 ~g~lyv~d~~-~--~~~I~~~~~~g~--------------~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~- 215 (329)
T 3fvz_A 154 TGAVFVSDGY-C--NSRIVQFSPSGK--------------FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR- 215 (329)
T ss_dssp TCCEEEEECS-S--CCEEEEECTTSC--------------EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET-
T ss_pred CCeEEEEeCC-C--CCeEEEEcCCCC--------------EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC-
Confidence 4445444321 1 466888885431 0111100 0 00 112347888777887543
Q ss_pred CCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeC-----CeEEEEEEECCCCceeeecc---cCCe
Q 003878 380 DAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSD-----VKYVLQIRDLKNGSLLHQLP---IEIG 451 (789)
Q Consensus 380 ~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~-----g~~~L~~~dl~tG~~~~~l~---~~~~ 451 (789)
.+.+|.+++.++++....+..........++.+.+ +.++...... ....++++++.+|+.+..+. ....
T Consensus 216 --~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~ 292 (329)
T 3fvz_A 216 --ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFD 292 (329)
T ss_dssp --TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCS
T ss_pred --CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccC
Confidence 35789999998665233332222223455677777 5555442211 12378999988888765553 1233
Q ss_pred eEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 452 SVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 452 ~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
...++++++++ .++++-. ...+|+++++.
T Consensus 293 ~p~~ia~~~dG-~lyvad~---~~~~I~~~~~~ 321 (329)
T 3fvz_A 293 MPHDIVASEDG-TVYIGDA---HTNTVWKFTLT 321 (329)
T ss_dssp SEEEEEECTTS-EEEEEES---SSCCEEEEEEE
T ss_pred CeeEEEECCCC-CEEEEEC---CCCEEEEEeCC
Confidence 45677888888 5665432 23477777764
No 416
>2dst_A Hypothetical protein TTHA1544; conserved hypothetical protein, structural genomics, NPPSFA; 2.00A {Thermus thermophilus} SCOP: c.69.1.39
Probab=98.15 E-value=7.6e-06 Score=74.48 Aligned_cols=96 Identities=11% Similarity=-0.004 Sum_probs=63.7
Q ss_pred CCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCC
Q 003878 516 KDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKK 595 (789)
Q Consensus 516 ~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~ 595 (789)
.+| .++..... ++.|.||++| +... .|... +. ++|.|+.+|+||.|..... .
T Consensus 9 ~~g-~~~~~~~~--------g~~~~vv~~H-~~~~----~~~~~----l~-~~~~v~~~d~~G~G~s~~~--------~- 60 (131)
T 2dst_A 9 LYG-LNLVFDRV--------GKGPPVLLVA-EEAS----RWPEA----LP-EGYAFYLLDLPGYGRTEGP--------R- 60 (131)
T ss_dssp ETT-EEEEEEEE--------CCSSEEEEES-SSGG----GCCSC----CC-TTSEEEEECCTTSTTCCCC--------C-
T ss_pred ECC-EEEEEEEc--------CCCCeEEEEc-CCHH----HHHHH----Hh-CCcEEEEECCCCCCCCCCC--------C-
Confidence 477 77754322 2347899999 2211 22221 55 6799999999997753211 0
Q ss_pred cchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCc
Q 003878 596 QNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRPDL 642 (789)
Q Consensus 596 ~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~ 642 (789)
.. ++++.+.+..+++. .+.+++.++|+|+||.++..++.++|.+
T Consensus 61 ~~-~~~~~~~~~~~~~~--~~~~~~~lvG~S~Gg~~a~~~a~~~p~l 104 (131)
T 2dst_A 61 MA-PEELAHFVAGFAVM--MNLGAPWVLLRGLGLALGPHLEALGLRA 104 (131)
T ss_dssp CC-HHHHHHHHHHHHHH--TTCCSCEEEECGGGGGGHHHHHHTTCCE
T ss_pred CC-HHHHHHHHHHHHHH--cCCCccEEEEEChHHHHHHHHHhcCCcE
Confidence 11 66666666666554 2446899999999999999999999963
No 417
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=98.14 E-value=0.00016 Score=79.75 Aligned_cols=209 Identities=9% Similarity=0.063 Sum_probs=124.6
Q ss_pred cceEEEEe-CCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC---CC-CCcEEEEecCCCCeeEEEEEEecCC
Q 003878 237 FSSIAWTH-DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT---KQ-SEDILCWKDPEHPKYIFSGHVTEDG 311 (789)
Q Consensus 237 ~~~~~wsp-Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~---~~-~~~~~~~~~~~~~~~~~~~~~SpDG 311 (789)
...++|+| ||+.|+....+ ..|.+|++.+ .. .+..+.+. +...+..+.|+||+
T Consensus 66 V~~~~~s~~~~~~l~s~s~d-------------------g~v~vwd~~~~~~~~~~~~~~~~~---h~~~v~~~~~~~~~ 123 (437)
T 3gre_A 66 ITSSAVSPGETPYLITGSDQ-------------------GVIKIWNLKEIIVGEVYSSSLTYD---CSSTVTQITMIPNF 123 (437)
T ss_dssp EEEEEEECSSSCEEEEEETT-------------------SEEEEEEHHHHHTTCCCSCSEEEE---CSSCEEEEEECTTS
T ss_pred eEEEEECCCCCCEEEEecCC-------------------ceEEEeECcccccCcccceeeecc---CCCCEEEEEEeCCC
Confidence 68899999 99988766432 3588888755 22 11123333 23346789999999
Q ss_pred cEEEEEEEcCCCCceEEEEEECC---CCCCCcccccccCCCCccEeeec----ccccee---EEEecCCCEEEEEECCCC
Q 003878 312 QYLVMCIEENCDPVNKVYYCDLS---ALPEGLEGFKKRDGLLPFVKLID----GFDAQY---EVIANDDTVFTFLTNKDA 381 (789)
Q Consensus 312 ~~l~~~~~~~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~~~~l~~----~~~~~~---~~~s~dG~~l~~~tn~~~ 381 (789)
++|+..+.+ ..|.++|+. ++.. . .... ......+.- ...... ..+++++..|+..+.
T Consensus 124 ~~l~s~s~d-----g~i~vwd~~~~~~~~~-~-~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~--- 190 (437)
T 3gre_A 124 DAFAVSSKD-----GQIIVLKVNHYQQESE-V-KFLN---CECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTN--- 190 (437)
T ss_dssp SEEEEEETT-----SEEEEEEEEEEEETTE-E-EEEE---EEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEET---
T ss_pred CEEEEEeCC-----CEEEEEEeccccCCce-e-eccc---cceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeC---
Confidence 998876533 447777764 2210 0 0000 000011100 000011 124567776665443
Q ss_pred CCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-CeeEEEee---
Q 003878 382 PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAIS--- 457 (789)
Q Consensus 382 ~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~-~~~v~~~s--- 457 (789)
+..|..+|+.+++....+..+.....+..+.+++++.++++...++ .|.+||+.+++....+..+ ...+..+.
T Consensus 191 -d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg--~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 191 -LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRG--IIDIWDIRFNVLIRSWSFGDHAPITHVEVCQ 267 (437)
T ss_dssp -TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTS--CEEEEETTTTEEEEEEBCTTCEEEEEEEECT
T ss_pred -CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCC--eEEEEEcCCccEEEEEecCCCCceEEEEecc
Confidence 3689999998876333443311235688899998777888888887 6899999888776666533 55676773
Q ss_pred -cccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 458 -ARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 458 -~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+++++..++ +. ..-+.+..||+.+++
T Consensus 268 ~~s~~~~~l~-s~---~~dg~i~iwd~~~~~ 294 (437)
T 3gre_A 268 FYGKNSVIVV-GG---SSKTFLTIWNFVKGH 294 (437)
T ss_dssp TTCTTEEEEE-EE---STTEEEEEEETTTTE
T ss_pred ccCCCccEEE-EE---cCCCcEEEEEcCCCc
Confidence 445554433 32 234689999998885
No 418
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=98.14 E-value=0.00033 Score=74.63 Aligned_cols=158 Identities=8% Similarity=0.026 Sum_probs=91.7
Q ss_pred cceEEEEe--CCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEE
Q 003878 237 FSSIAWTH--DSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYL 314 (789)
Q Consensus 237 ~~~~~wsp--Dg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l 314 (789)
...++|+| +++.|+....+ ..|.+|++.++.. ..+.... +...+..++|+|||++|
T Consensus 128 v~~~~~~~~~~~~~l~s~s~d-------------------g~i~~wd~~~~~~--~~~~~~~-~~~~i~~~~~~pdg~~l 185 (343)
T 3lrv_A 128 IIYMYGHNEVNTEYFIWADNR-------------------GTIGFQSYEDDSQ--YIVHSAK-SDVEYSSGVLHKDSLLL 185 (343)
T ss_dssp EEEEECCC---CCEEEEEETT-------------------CCEEEEESSSSCE--EEEECCC-SSCCCCEEEECTTSCEE
T ss_pred EEEEEcCCCCCCCEEEEEeCC-------------------CcEEEEECCCCcE--EEEEecC-CCCceEEEEECCCCCEE
Confidence 46889999 99988765433 2488899876533 2333222 22235578999999998
Q ss_pred EEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-ccccee-EEEecCCCEEEEEECCCCCCceEEEEECC
Q 003878 315 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQY-EVIANDDTVFTFLTNKDAPKYKIIRVDLK 392 (789)
Q Consensus 315 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~~~~-~~~s~dG~~l~~~tn~~~~~~~L~~~dl~ 392 (789)
+.... ...|.++|+.++. .....+.. ...... ..|+|+|..|+..+ . + .|..+|+.
T Consensus 186 asg~~-----dg~i~iwd~~~~~------------~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~---~-~v~iwd~~ 243 (343)
T 3lrv_A 186 ALYSP-----DGILDVYNLSSPD------------QASSRFPVDEEAKIKEVKFADNGYWMVVEC-D---Q-TVVCFDLR 243 (343)
T ss_dssp EEECT-----TSCEEEEESSCTT------------SCCEECCCCTTSCEEEEEECTTSSEEEEEE-S---S-BEEEEETT
T ss_pred EEEcC-----CCEEEEEECCCCC------------CCccEEeccCCCCEEEEEEeCCCCEEEEEe-C---C-eEEEEEcC
Confidence 86543 3458999998752 11012221 112222 34899999887655 2 2 79999998
Q ss_pred CCCCeEEeccCC-CCceee--eEEEecCCEEEEEEEe-CCeEEEEEEECCCC
Q 003878 393 EPNDWFEVIPEA-ERDVLE--SATAVNLNQMIVSYLS-DVKYVLQIRDLKNG 440 (789)
Q Consensus 393 ~~~~~~~l~~~~-~~~~i~--~v~~~~~~~lv~~~~~-~g~~~L~~~dl~tG 440 (789)
+++....+.+.. ....+. .+++++++.++++... ++ .+.+|+.+++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~--~i~v~~~~~~ 293 (343)
T 3lrv_A 244 KDVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESN--SLTIYKFDKK 293 (343)
T ss_dssp SSTTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTT--EEEEEEECTT
T ss_pred CCCcceeecccccccccccceEEEECCCCCEEEEecCCCC--cEEEEEEccc
Confidence 765222221110 011222 4888886666666665 55 5677776533
No 419
>1jmk_C SRFTE, surfactin synthetase; thioesterase, non-ribosomal peptide synthesis, alpha-beta hydrolase, cyclic peptide; 1.71A {Bacillus subtilis} SCOP: c.69.1.22
Probab=98.14 E-value=7e-06 Score=82.39 Aligned_cols=89 Identities=9% Similarity=0.010 Sum_probs=60.6
Q ss_pred ccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 003878 538 HPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 617 (789)
Q Consensus 538 ~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~ 617 (789)
.|.|+++||..+.. ..|.. +...+. . +.|+.++++|.+. ..+|+.+.++.+.. .
T Consensus 17 ~~~l~~~hg~~~~~--~~~~~-~~~~l~-~-~~v~~~d~~g~~~----------------~~~~~~~~i~~~~~-----~ 70 (230)
T 1jmk_C 17 EQIIFAFPPVLGYG--LMYQN-LSSRLP-S-YKLCAFDFIEEED----------------RLDRYADLIQKLQP-----E 70 (230)
T ss_dssp SEEEEEECCTTCCG--GGGHH-HHHHCT-T-EEEEEECCCCSTT----------------HHHHHHHHHHHHCC-----S
T ss_pred CCCEEEECCCCCch--HHHHH-HHHhcC-C-CeEEEecCCCHHH----------------HHHHHHHHHHHhCC-----C
Confidence 47899999976543 23332 345565 5 9999999997432 23455555555421 2
Q ss_pred CcEEEEeeChHHHHHHHHHHhCC---CceeEEEecCCc
Q 003878 618 RKLCIEGGSNGGLLVGACINQRP---DLFGCALAHVGV 652 (789)
Q Consensus 618 ~~i~i~G~S~GG~l~~~~~~~~p---d~f~a~v~~~p~ 652 (789)
.++.++|+|+||.++..++.+.| +..+++|+..+.
T Consensus 71 ~~~~l~G~S~Gg~ia~~~a~~~~~~~~~v~~lvl~~~~ 108 (230)
T 1jmk_C 71 GPLTLFGYSAGCSLAFEAAKKLEGQGRIVQRIIMVDSY 108 (230)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CCeEEEEECHhHHHHHHHHHHHHHcCCCccEEEEECCC
Confidence 47999999999999998887653 567777766554
No 420
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.14 E-value=0.00021 Score=77.16 Aligned_cols=73 Identities=5% Similarity=-0.011 Sum_probs=51.1
Q ss_pred EEEecC-CEEEEEEEeC-C-----eEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 412 ATAVNL-NQMIVSYLSD-V-----KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 412 v~~~~~-~~lv~~~~~~-g-----~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
+.++++ +++|+....+ + ...+.++|+++++.+..|+.+. ...++.+++|++.++++... ...++..+|+.
T Consensus 269 v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~--~~~~VsVID~~ 345 (368)
T 1mda_H 269 VAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSA--GTEVLDIYDAA 345 (368)
T ss_dssp EEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEET--TTTEEEEEESS
T ss_pred eEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccC--CCCeEEEEECC
Confidence 556764 5677655523 3 3345699999988877777653 34467889999988876541 24799999999
Q ss_pred CCC
Q 003878 485 TET 487 (789)
Q Consensus 485 tg~ 487 (789)
+++
T Consensus 346 t~k 348 (368)
T 1mda_H 346 SDQ 348 (368)
T ss_dssp SCE
T ss_pred CCc
Confidence 884
No 421
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=98.14 E-value=3.5e-06 Score=90.15 Aligned_cols=109 Identities=8% Similarity=-0.041 Sum_probs=75.5
Q ss_pred ccEEEEEcCCCCcc--------CCCCC----CHHHHHHHHcCCeE---EEEEeecCCCCCChhHHhcccccCCcchHHHH
Q 003878 538 HPCLLYGYGGFNIS--------VTPSF----SVSRTILMRHLGAV---FCIANIRGGGEYGEEWHKGGALAKKQNCFDDF 602 (789)
Q Consensus 538 ~P~ll~~hGg~~~~--------~~~~~----~~~~~~~l~~~G~~---v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~ 602 (789)
.+.||++||..+.. ....| .. +...|.++||. |+.+|+||.|..... . .........+++
T Consensus 40 ~~pVVlvHG~~~~~~~~~~~~~~~~~w~~~~~~-l~~~L~~~Gy~~~~V~~~D~~g~G~S~~~---~-~~~~~~~~~~~l 114 (342)
T 2x5x_A 40 KTPVIFIHGNGDNAISFDMPPGNVSGYGTPARS-VYAELKARGYNDCEIFGVTYLSSSEQGSA---Q-YNYHSSTKYAII 114 (342)
T ss_dssp SCCEEEECCTTCCGGGGGCCCCCCTTTCCCSSC-HHHHHHHTTCCTTSEEEECCSCHHHHTCG---G-GCCBCHHHHHHH
T ss_pred CCeEEEECCcCCCcccccccccccccccccHHH-HHHHHHhCCCCCCeEEEEeCCCCCccCCc---c-ccCCHHHHHHHH
Confidence 34488899977643 22344 44 34455558998 999999986531100 0 011123446788
Q ss_pred HHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhC--CCceeEEEecCCcc
Q 003878 603 ISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQR--PDLFGCALAHVGVM 653 (789)
Q Consensus 603 ~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~--pd~f~a~v~~~p~~ 653 (789)
.+.++.+++.- ..+++.++|||+||+++..++.++ |++++++|+..|..
T Consensus 115 ~~~I~~l~~~~--g~~~v~LVGHSmGG~iA~~~a~~~~~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 115 KTFIDKVKAYT--GKSQVDIVAHSMGVSMSLATLQYYNNWTSVRKFINLAGGI 165 (342)
T ss_dssp HHHHHHHHHHH--TCSCEEEEEETHHHHHHHHHHHHHTCGGGEEEEEEESCCT
T ss_pred HHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHcCchhhhcEEEEECCCc
Confidence 88888887652 336899999999999999999988 89999999887654
No 422
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.10 E-value=9e-05 Score=80.13 Aligned_cols=80 Identities=11% Similarity=-0.012 Sum_probs=51.7
Q ss_pred EEecCCCEEEEEECCC-C----CCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCE-EEEEEE-eCCeEEEEEEEC
Q 003878 365 VIANDDTVFTFLTNKD-A----PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYL-SDVKYVLQIRDL 437 (789)
Q Consensus 365 ~~s~dG~~l~~~tn~~-~----~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~-lv~~~~-~~g~~~L~~~dl 437 (789)
.+++||+++|+..+.. . ....+.++|+++.+.... ++-. ..-.++.++++++ +++... .+ ..|.++|+
T Consensus 270 ~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~-i~vg--~~p~gi~~s~Dg~~l~va~~~~~--~~VsVID~ 344 (368)
T 1mda_H 270 AKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGP-ISNG--HDSDAIIAAQDGASDNYANSAGT--EVLDIYDA 344 (368)
T ss_dssp EEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEEC-CEEE--EEECEEEECCSSSCEEEEEETTT--TEEEEEES
T ss_pred EEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEE-EECC--CCcceEEECCCCCEEEEEccCCC--CeEEEEEC
Confidence 4899999999865411 1 013455999988762222 2222 2346788888654 666555 23 38999999
Q ss_pred CCCceeeecccC
Q 003878 438 KNGSLLHQLPIE 449 (789)
Q Consensus 438 ~tG~~~~~l~~~ 449 (789)
++++.++.|..+
T Consensus 345 ~t~kvv~~I~vg 356 (368)
T 1mda_H 345 ASDQDQSSVELD 356 (368)
T ss_dssp SSCEEEEECCCC
T ss_pred CCCcEEEEEECC
Confidence 999887777654
No 423
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=98.09 E-value=5.8e-06 Score=87.90 Aligned_cols=209 Identities=11% Similarity=-0.027 Sum_probs=107.0
Q ss_pred EEEEEcC--CCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCCCC
Q 003878 540 CLLYGYG--GFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYTQS 617 (789)
Q Consensus 540 ~ll~~hG--g~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~d~ 617 (789)
.|+++|| +.+. ...|.. +...|. .++.|+.++.||.|...... ......+++++.+.+..++..- ...
T Consensus 91 ~l~~~hg~g~~~~--~~~~~~-l~~~L~-~~~~v~~~d~~G~g~~~~~~-----~~~~~~~~~~~a~~~~~~i~~~-~~~ 160 (319)
T 2hfk_A 91 VLVGCTGTAANGG--PHEFLR-LSTSFQ-EERDFLAVPLPGYGTGTGTG-----TALLPADLDTALDAQARAILRA-AGD 160 (319)
T ss_dssp EEEEECCCCTTCS--TTTTHH-HHHTTT-TTCCEEEECCTTCCBC---C-----BCCEESSHHHHHHHHHHHHHHH-HTT
T ss_pred cEEEeCCCCCCCc--HHHHHH-HHHhcC-CCCceEEecCCCCCCCcccc-----cCCCCCCHHHHHHHHHHHHHHh-cCC
Confidence 7889998 2322 334443 445666 79999999999976420000 0111234554443332222220 122
Q ss_pred CcEEEEeeChHHHHHHHHHHhCC----CceeEEEecCCccccccc-c-cc--cCCccchhhcCCCCcHHHHHHHHhcCc-
Q 003878 618 RKLCIEGGSNGGLLVGACINQRP----DLFGCALAHVGVMDMLRY-H-KF--TIGHAWVSDFGCSEEEEEFYWLIKYSP- 688 (789)
Q Consensus 618 ~~i~i~G~S~GG~l~~~~~~~~p----d~f~a~v~~~p~~d~~~~-~-~~--~~~~~~~~e~g~p~~~~~~~~l~~~sP- 688 (789)
.++.++|+|+||.++..++.+.| +..+++|+..+....... . .+ .....+....-.+.....+..+..|.-
T Consensus 161 ~p~~l~G~S~GG~vA~~~A~~l~~~~g~~v~~lvl~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (319)
T 2hfk_A 161 APVVLLGHAGGALLAHELAFRLERAHGAPPAGIVLVDPYPPGHQEPIEVWSRQLGEGLFAGELEPMSDARLLAMGRYARF 240 (319)
T ss_dssp SCEEEEEETHHHHHHHHHHHHHHHHHSCCCSEEEEESCCCTTSCHHHHHTHHHHHHHHHHTCSSCCCHHHHHHHHHHHHH
T ss_pred CCEEEEEECHHHHHHHHHHHHHHHhhCCCceEEEEeCCCCCCchhHHHHHHHHhhHHHHHhhccccchHHHHHHHHHHHH
Confidence 57999999999999999988763 457777766543211000 0 00 000000010111211222222222100
Q ss_pred --ccCCCCCCCCCCCCCCCCCeEEEEecCCCCCCCcHH-HHHHHHHHHHhhccCCCCCCCCCcEEEEEeCCCCcCCCCch
Q 003878 689 --LHNVRRPWEQNPDKPFQYPSTLLLTADHDDRVVPLH-SLKLLATMQYVLCTSLENSPQTNPIIGRIERKAGHGVGLPT 765 (789)
Q Consensus 689 --~~~v~~~~~~~~~~~~~~pp~Li~~g~~D~~V~~~~-~~~~~~~L~~~~~~~~~~~~~~~~~~l~~~~~~gH~~~~~~ 765 (789)
....... ..|+|+++| .|..+++.. ...+ +.. ....++++.++ +||...-..
T Consensus 241 ~~~~~~~~i----------~~Pvl~i~g-~D~~~~~~~~~~~~----~~~---------~~~~~~~~~v~-g~H~~~~~e 295 (319)
T 2hfk_A 241 LAGPRPGRS----------SAPVLLVRA-SEPLGDWQEERGDW----RAH---------WDLPHTVADVP-GDHFTMMRD 295 (319)
T ss_dssp HHSCCCCCC----------CSCEEEEEE-SSCSSCCCGGGCCC----SCC---------CSSCSEEEEES-SCTTHHHHT
T ss_pred HHhCCCCCc----------CCCEEEEEc-CCCCCCccccccch----hhc---------CCCCCEEEEeC-CCcHHHHHH
Confidence 0112232 679999999 999888764 2222 211 02345777777 699742211
Q ss_pred hhHHHHHHHHHHHHHHHhC
Q 003878 766 QKMIDEAADRYGFMAKMLG 784 (789)
Q Consensus 766 ~~~~~~~~~~~~fl~~~l~ 784 (789)
. .....+.+.+||.+...
T Consensus 296 ~-~~~~~~~i~~~L~~~~~ 313 (319)
T 2hfk_A 296 H-APAVAEAVLSWLDAIEG 313 (319)
T ss_dssp C-HHHHHHHHHHHHHHHHC
T ss_pred h-HHHHHHHHHHHHHhcCC
Confidence 2 23556677888876543
No 424
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.09 E-value=0.0014 Score=67.06 Aligned_cols=164 Identities=9% Similarity=-0.014 Sum_probs=99.1
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.++++.|+++.||++.. ...+|++.++..... ..+.... ...-.+++++|++.+|++.
T Consensus 82 ~~ia~d~~~~~lyv~d~------------------~~~~I~~~~~~g~~~--~~~~~~~--~~~P~~i~vd~~~g~lyv~ 139 (267)
T 1npe_A 82 EGIALDHLGRTIFWTDS------------------QLDRIEVAKMDGTQR--RVLFDTG--LVNPRGIVTDPVRGNLYWT 139 (267)
T ss_dssp EEEEEETTTTEEEEEET------------------TTTEEEEEETTSCSC--EEEECSS--CSSEEEEEEETTTTEEEEE
T ss_pred cEEEEEecCCeEEEEEC------------------CCCEEEEEEcCCCCE--EEEEECC--CCCccEEEEeeCCCEEEEE
Confidence 67889999989988732 234688888764322 2232221 1123478899998888876
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-cccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
.... ....|+++++++.. ...+. .+.. ..-..++++++.||+.... ..+|.++++++..
T Consensus 140 ~~~~--~~~~I~~~~~dg~~--------------~~~~~~~~~~~P~gia~d~~~~~lyv~d~~---~~~I~~~~~~g~~ 200 (267)
T 1npe_A 140 DWNR--DNPKIETSHMDGTN--------------RRILAQDNLGLPNGLTFDAFSSQLCWVDAG---THRAECLNPAQPG 200 (267)
T ss_dssp ECCS--SSCEEEEEETTSCC--------------CEEEECTTCSCEEEEEEETTTTEEEEEETT---TTEEEEEETTEEE
T ss_pred ECCC--CCcEEEEEecCCCC--------------cEEEEECCCCCCcEEEEcCCCCEEEEEECC---CCEEEEEecCCCc
Confidence 5321 13578888876521 11111 1111 1123478889999876543 4689999997653
Q ss_pred CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeeccc
Q 003878 396 DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI 448 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~ 448 (789)
.+.+++.. ..-.++++.. +.+++....++ +|++++.++|+..+.+..
T Consensus 201 -~~~~~~~~--~~P~gi~~d~-~~lyva~~~~~--~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 201 -RRKVLEGL--QYPFAVTSYG-KNLYYTDWKTN--SVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp -EEEEEECC--CSEEEEEEET-TEEEEEETTTT--EEEEEETTTTEEEEEECC
T ss_pred -eEEEecCC--CCceEEEEeC-CEEEEEECCCC--eEEEEeCCCCCceEEEcc
Confidence 33343322 2234666664 78887554443 799999988887666643
No 425
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=98.07 E-value=0.00049 Score=72.03 Aligned_cols=213 Identities=14% Similarity=0.073 Sum_probs=121.5
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEec--CCcEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE--DGQYL 314 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~Sp--DG~~l 314 (789)
...++|+|||+.|+....+ ..|++|++.+.......+.....+...+..+.|+| ||++|
T Consensus 14 v~~~~~~~~~~~l~~~~~d-------------------g~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l 74 (351)
T 3f3f_A 14 VHDVVYDFYGRHVATCSSD-------------------QHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRII 74 (351)
T ss_dssp EEEEEECSSSSEEEEEETT-------------------SEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEE
T ss_pred eeEEEEcCCCCEEEEeeCC-------------------CeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEE
Confidence 5789999999988866432 35888888765433222222222344567899999 69988
Q ss_pred EEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEecC--CCEEEEEECCCCCCceEEEEEC
Q 003878 315 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIAND--DTVFTFLTNKDAPKYKIIRVDL 391 (789)
Q Consensus 315 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~d--G~~l~~~tn~~~~~~~L~~~dl 391 (789)
+....+ ..|.++|+.++...... ....+...+........ ..|+|+ ++.|+..+. ++.|..+|+
T Consensus 75 ~s~~~d-----g~v~vwd~~~~~~~~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----dg~v~iwd~ 141 (351)
T 3f3f_A 75 ASASYD-----KTVKLWEEDPDQEECSG----RRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGN----DGILRLYDA 141 (351)
T ss_dssp EEEETT-----SCEEEEEECTTSCTTSS----CSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET----TCEEEEEEC
T ss_pred EEEcCC-----CeEEEEecCCCcccccc----cCcceeeeecccCCceeEEEEcCCCCCcEEEEecC----CCcEEEecC
Confidence 876543 34788888764211000 00011111211112122 348888 887776543 467999998
Q ss_pred CCCCC---eE-----E---eccCCCCceeeeEEEecC---CEEEEEEEeCCeEEEEEEECCCCce--eeecccCCeeEEE
Q 003878 392 KEPND---WF-----E---VIPEAERDVLESATAVNL---NQMIVSYLSDVKYVLQIRDLKNGSL--LHQLPIEIGSVNA 455 (789)
Q Consensus 392 ~~~~~---~~-----~---l~~~~~~~~i~~v~~~~~---~~lv~~~~~~g~~~L~~~dl~tG~~--~~~l~~~~~~v~~ 455 (789)
.+++. +. . +.+......+..+.+.++ +.+++....++ .+..++..+++. ...+..+...+..
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~h~~~i~~ 219 (351)
T 3f3f_A 142 LEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ--AIIYQRGKDGKLHVAAKLPGHKSLIRS 219 (351)
T ss_dssp SSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE--EEEEEECTTSCEEEEEECCCCCSCEEE
T ss_pred CChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCC--cEEEEccCCCceeeeeecCCCCcceeE
Confidence 77641 11 0 011122244567777764 56666666665 445555555553 2334434667888
Q ss_pred eecccCCc---EEEEEEcCCCCCcEEEEEECCCC
Q 003878 456 ISARREDS---VVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 456 ~s~s~d~~---~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
+.+++++. .++++.+ .-+.+..||+.++
T Consensus 220 ~~~~p~~~~~~~~l~s~~---~dg~i~iwd~~~~ 250 (351)
T 3f3f_A 220 ISWAPSIGRWYQLIATGC---KDGRIRIFKITEK 250 (351)
T ss_dssp EEECCCSSCSSEEEEEEE---TTSCEEEEEEEEC
T ss_pred EEECCCCCCcceEEEEEc---CCCeEEEEeCCCC
Confidence 89999873 3444443 2457888887665
No 426
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=98.05 E-value=0.0008 Score=71.35 Aligned_cols=201 Identities=7% Similarity=-0.057 Sum_probs=113.0
Q ss_pred cceEEEEeC---CcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcE
Q 003878 237 FSSIAWTHD---SKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQY 313 (789)
Q Consensus 237 ~~~~~wspD---g~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~ 313 (789)
...++|+|| |+.|+....+ ..|++|++.+........+... ...+..+.|+|||++
T Consensus 42 v~~~~~~~~~~~g~~l~~~~~d-------------------g~i~iw~~~~~~~~~~~~~~~h--~~~v~~~~~~~~~~~ 100 (368)
T 3mmy_A 42 IGCLSFSPPTLPGNFLIAGSWA-------------------NDVRCWEVQDSGQTIPKAQQMH--TGPVLDVCWSDDGSK 100 (368)
T ss_dssp EEEEEECCTTSSSEEEEEEETT-------------------SEEEEEEECTTSCEEEEEEEEC--SSCEEEEEECTTSSE
T ss_pred eEEEEEcCCCCCceEEEEECCC-------------------CcEEEEEcCCCCceeEEEeccc--cCCEEEEEECcCCCE
Confidence 578999999 5777765432 3588888876332222333332 334678999999999
Q ss_pred EEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEE--ecCCCEEEEEECCCCCCceEEEEE
Q 003878 314 LVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVI--ANDDTVFTFLTNKDAPKYKIIRVD 390 (789)
Q Consensus 314 l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~--s~dG~~l~~~tn~~~~~~~L~~~d 390 (789)
|+.... ...|.++|+.++. ............ ..| +++++.|+..+. ++.|..+|
T Consensus 101 l~s~~~-----dg~v~iwd~~~~~--------------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~----dg~i~vwd 157 (368)
T 3mmy_A 101 VFTASC-----DKTAKMWDLSSNQ--------------AIQIAQHDAPVKTIHWIKAPNYSCVMTGSW----DKTLKFWD 157 (368)
T ss_dssp EEEEET-----TSEEEEEETTTTE--------------EEEEEECSSCEEEEEEEECSSCEEEEEEET----TSEEEEEC
T ss_pred EEEEcC-----CCcEEEEEcCCCC--------------ceeeccccCceEEEEEEeCCCCCEEEEccC----CCcEEEEE
Confidence 986653 3468899998742 112222111122 236 777776665433 35688888
Q ss_pred CCCCCCeEEeccCC---------------------------------------CCceeeeEEEecCC----EEEEEEEeC
Q 003878 391 LKEPNDWFEVIPEA---------------------------------------ERDVLESATAVNLN----QMIVSYLSD 427 (789)
Q Consensus 391 l~~~~~~~~l~~~~---------------------------------------~~~~i~~v~~~~~~----~lv~~~~~~ 427 (789)
+.+++....+..+. .......+.+..+. ..++....+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 237 (368)
T 3mmy_A 158 TRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIE 237 (368)
T ss_dssp SSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETT
T ss_pred CCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCC
Confidence 76654222221111 00111122222111 125556666
Q ss_pred CeEEEEEEECCCCc---eeeecccCCe------------eEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 428 VKYVLQIRDLKNGS---LLHQLPIEIG------------SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 428 g~~~L~~~dl~tG~---~~~~l~~~~~------------~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+ .|.+|++..+. ....+..... .+..+.++++++.++... .-+.++.||+.+++
T Consensus 238 g--~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~----~dg~i~iwd~~~~~ 306 (368)
T 3mmy_A 238 G--RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVG----SDGRFSFWDKDART 306 (368)
T ss_dssp S--EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEE----TTSCEEEEETTTTE
T ss_pred C--cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEc----cCCeEEEEECCCCc
Confidence 5 67888887552 2222222222 477888999998665443 23679999998874
No 427
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=98.05 E-value=0.0011 Score=71.22 Aligned_cols=205 Identities=9% Similarity=-0.019 Sum_probs=115.2
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccccee
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFF 213 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 213 (789)
+..+.++++++.++.+... ..+|++||+.+++.+. .+... .
T Consensus 61 ~~~~~~~~~~~~~~~~~~~----d~~v~iWd~~~~~~~~-~~~~~----------------------~------------ 101 (355)
T 3vu4_A 61 LSKVRMLHRTNYVAFVTGV----KEVVHIWDDVKKQDVS-RIKVD----------------------A------------ 101 (355)
T ss_dssp CCEEEECTTSSEEEEECSS----TTEEEEEETTTTEEEE-EEECS----------------------S------------
T ss_pred eEEEEEcCCCCEEEEEECC----ccEEEEEECCCCcEEE-EEECC----------------------C------------
Confidence 4557789999998865322 2389999999997653 11111 0
Q ss_pred eEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCC-CCCcEEE
Q 003878 214 FFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK-QSEDILC 292 (789)
Q Consensus 214 ~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~-~~~~~~~ 292 (789)
....++|+++. ++... ...+++|++.+. .....
T Consensus 102 ----------------------~v~~v~~~~~~--~~~~~--------------------~~~i~i~d~~~~~~~~~~-- 135 (355)
T 3vu4_A 102 ----------------------PVKDLFLSREF--IVVSY--------------------GDVISVFKFGNPWKRITD-- 135 (355)
T ss_dssp ----------------------CEEEEEECSSE--EEEEE--------------------TTEEEEEESSTTCCBSSC--
T ss_pred ----------------------ceEEEEEcCCE--EEEEE--------------------cCEEEEEECCCCceeeEE--
Confidence 24567787653 44332 124888888765 22111
Q ss_pred EecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccc---cCCCCc-cEeeecccccee-EEEe
Q 003878 293 WKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKK---RDGLLP-FVKLIDGFDAQY-EVIA 367 (789)
Q Consensus 293 ~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~---~~~~~~-~~~l~~~~~~~~-~~~s 367 (789)
+.. + .....+++ +++++.+... ...|.++|+.++..- ....+ .....+ ...+........ ..|+
T Consensus 136 ~~~---~--~~~~~~s~--~~la~~sg~~---~g~v~iwd~~~~~~~-~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s 204 (355)
T 3vu4_A 136 DIR---F--GGVCEFSN--GLLVYSNEFN---LGQIHITKLQSSGSA-TTQDQGVQQKAILGKGVLIKAHTNPIKMVRLN 204 (355)
T ss_dssp CEE---E--EEEEEEET--TEEEEEESSC---TTCEEEEECCC-------------------CCEEECCCSSCEEEEEEC
T ss_pred ecc---C--CceEEEEc--cEEEEeCCCc---CcEEEEEECCCCCcc-ccccccccccccCcccEEEEccCCceEEEEEC
Confidence 111 1 12345677 6777653222 345888998864200 00000 000001 222222222222 3489
Q ss_pred cCCCEEEEEECCCCCCce-EEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCC
Q 003878 368 NDDTVFTFLTNKDAPKYK-IIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNG 440 (789)
Q Consensus 368 ~dG~~l~~~tn~~~~~~~-L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG 440 (789)
|||+.|+..+. +.. |..+|+.+++....+........+..+++++++.++++...++ .|.+||+..+
T Consensus 205 ~~g~~l~s~s~----d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~--~v~iw~~~~~ 272 (355)
T 3vu4_A 205 RKSDMVATCSQ----DGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKW--TLHVFEIFND 272 (355)
T ss_dssp TTSSEEEEEET----TCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTC--EEEEEESSCC
T ss_pred CCCCEEEEEeC----CCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCC--EEEEEEccCC
Confidence 99998775433 355 8899998876344443221235688999999778888888886 7888998754
No 428
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.04 E-value=0.0012 Score=72.51 Aligned_cols=163 Identities=12% Similarity=0.033 Sum_probs=90.2
Q ss_pred EEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEec-CCCCeeEEEEEEecCCcEEEEEE
Q 003878 240 IAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD-PEHPKYIFSGHVTEDGQYLVMCI 318 (789)
Q Consensus 240 ~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~SpDG~~l~~~~ 318 (789)
++|+|||+.||..... ....|++++..+.... ..+-.. +.......+++++|++..|++ +
T Consensus 176 ia~~~~g~~l~~~d~~-----------------~~~~I~~~d~~~~~~~-~~~g~~~~~~~~~p~~iav~p~~g~lyv-~ 236 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWE-----------------GTHTVYVYMKASGWAP-TRIGQLGSTFSGKIGAVALDETEEWLYF-V 236 (409)
T ss_dssp CEECTTSSEEEEEBSS-----------------TTCEEEEEEGGGTTCE-EEEEECCTTSCSCCCBCEECTTSSEEEE-E
T ss_pred eeEecCCCcEEEEecC-----------------CCceEEEEEcCCCcee-EEeeeccchhcCCcEEEEEeCCCCeEEE-E
Confidence 9999999988776321 1226888777544321 111010 101112235788997777777 3
Q ss_pred EcCCCCceEEEEEECCCCCCCcccccccCCCCccEe--eec--cccce-eEEEecCCCEEEEEECCCCCCceEEEEECCC
Q 003878 319 EENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVK--LID--GFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKE 393 (789)
Q Consensus 319 ~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~--l~~--~~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~ 393 (789)
. . ...|+.++.+++... .+.. ... +.... ...++|++..||+... .+.+|++++.++
T Consensus 237 d-~---~~~I~~~d~~~~~~~-----------~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~---~~~~I~~~~~~g 298 (409)
T 3hrp_A 237 D-S---NKNFGRFNVKTQEVT-----------LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQ---NLSSVYKITPDG 298 (409)
T ss_dssp C-T---TCEEEEEETTTCCEE-----------EEEECCCCSCCCCSSCCEEEEETTTTEEEEEET---TTTEEEEECTTC
T ss_pred E-C---CCcEEEEECCCCCEE-----------EEecccccCCCCCCccccEEEeCCCCEEEEEeC---CCCEEEEEecCC
Confidence 2 2 357999998864200 0000 000 11101 3458887788887643 356899998765
Q ss_pred CCCeEEeccCC-------------CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCce
Q 003878 394 PNDWFEVIPEA-------------ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 394 ~~~~~~l~~~~-------------~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~ 442 (789)
. ...+.... .-....++++++++.++++-. .+..+|+++++.+|+.
T Consensus 299 ~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~-~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 299 E--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG-FKGYCLRKLDILDGYV 357 (409)
T ss_dssp C--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET-TTTCEEEEEETTTTEE
T ss_pred C--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC-CCCCEEEEEECCCCEE
Confidence 3 23333221 012245788888667776543 0234899999766764
No 429
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=98.04 E-value=8.7e-05 Score=88.60 Aligned_cols=201 Identities=11% Similarity=-0.010 Sum_probs=123.7
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecC--CcEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTED--GQYL 314 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpD--G~~l 314 (789)
...++|+|||+.|+....+ ..|.+|++.++..+....+. .+...+..+.|+|+ |++|
T Consensus 12 V~~l~~s~dg~~latg~~d-------------------g~I~vwd~~~~~~~~~~~l~--~h~~~V~~l~~s~~~~~~~l 70 (753)
T 3jro_A 12 IHDAVLDYYGKRLATCSSD-------------------KTIKIFEVEGETHKLIDTLT--GHEGPVWRVDWAHPKFGTIL 70 (753)
T ss_dssp EEEECCCSSSCCEEEEETT-------------------TEEEEEEEETTEEEEEEEEC--CCSSCEEEEEECCTTSCSEE
T ss_pred eEEEEECCCCCeEEEEECC-------------------CcEEEEecCCCCCccceecc--CCcCceEEEEecCCCCCCEE
Confidence 5788999999988866432 35788887643322222333 33444678999998 9988
Q ss_pred EEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccce-eEEEecC--CCEEEEEECCCCCCceEEEEEC
Q 003878 315 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQ-YEVIAND--DTVFTFLTNKDAPKYKIIRVDL 391 (789)
Q Consensus 315 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~s~d--G~~l~~~tn~~~~~~~L~~~dl 391 (789)
+..+.+ ..|+++|+.++. .............. ...|+|+ |+.++..+. ++.|..+|+
T Consensus 71 ~s~s~D-----g~I~vwd~~~~~-----------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~----dg~I~vwdl 130 (753)
T 3jro_A 71 ASCSYD-----GKVLIWKEENGR-----------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASS----DGKVSVVEF 130 (753)
T ss_dssp EEEETT-----SCEEEEEEETTE-----------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEET----TSEEEEEEC
T ss_pred EEEeCC-----CeEEEEECCCCc-----------ccccccccCCCCCeEEEEECCCCCCCEEEEEeC----CCcEEEEEe
Confidence 876643 347888887641 00111121111112 2348898 887776543 467999998
Q ss_pred CCCCC--eEEeccCCCCceeeeEEEec-------------CCEEEEEEEeCCeEEEEEEECCCCce----eeecccCCee
Q 003878 392 KEPND--WFEVIPEAERDVLESATAVN-------------LNQMIVSYLSDVKYVLQIRDLKNGSL----LHQLPIEIGS 452 (789)
Q Consensus 392 ~~~~~--~~~l~~~~~~~~i~~v~~~~-------------~~~lv~~~~~~g~~~L~~~dl~tG~~----~~~l~~~~~~ 452 (789)
.++.. ...+..+ ...+..+.+.+ ++.++++...++ .|++||+.++.. ...+..+.+.
T Consensus 131 ~~~~~~~~~~~~~~--~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg--~I~iwd~~~~~~~~~~~~~~~~h~~~ 206 (753)
T 3jro_A 131 KENGTTSPIIIDAH--AIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN--LVKIWKYNSDAQTYVLESTLEGHSDW 206 (753)
T ss_dssp CSSSCCCCEEEECC--SSCEEEEEECCCC---------CGGGCCEEEEETTS--CEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred ecCCCcceeEeecC--CCceEEEEecCcccccccccccCCCCCEEEEEECCC--eEEEEeccCCcccceeeeeecCCCCc
Confidence 77631 2222222 35577888877 356777777777 588888876532 2333444667
Q ss_pred EEEeecccC---CcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 453 VNAISARRE---DSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 453 v~~~s~s~d---~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
+..+.++|+ ++.++ +.+ .-+.+..||+.++
T Consensus 207 V~~l~~sp~~~~~~~l~-s~s---~Dg~I~iwd~~~~ 239 (753)
T 3jro_A 207 VRDVAWSPTVLLRSYLA-SVS---QDRTCIIWTQDNE 239 (753)
T ss_dssp EEEEEECCCCSSSEEEE-EEE---SSSCEEEEEESSS
T ss_pred EEEEEeccCCCCCCEEE-EEe---cCCEEEEecCCCC
Confidence 888899998 55444 433 2357888888775
No 430
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.01 E-value=0.01 Score=60.44 Aligned_cols=200 Identities=8% Similarity=-0.019 Sum_probs=117.8
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
..+++|+|+++.||++.. ...+|++.++.+... ..+.... -....+++++++++.|++
T Consensus 38 ~~gi~~d~~~~~ly~~d~------------------~~~~I~~~~~~g~~~--~~~~~~~--~~~p~~ia~d~~~~~lyv 95 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDI------------------SEPSIGRASLHGGEP--TTIIRQD--LGSPEGIALDHLGRTIFW 95 (267)
T ss_dssp EEEEEEETTTTEEEEEET------------------TTTEEEEEESSSCCC--EEEECTT--CCCEEEEEEETTTTEEEE
T ss_pred EEEEEEecCCCEEEEEEC------------------CCCEEEEEecCCCCc--EEEEECC--CCCccEEEEEecCCeEEE
Confidence 368999999999998742 234688888865432 2232221 112347889999998887
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-cc-cceeEEEecCCCEEEEEECCCCCCceEEEEECCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GF-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 394 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~-~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~ 394 (789)
.... ...|+++++++.. ...+.. +. ...-..++++++.||+.... ....+|+++++++.
T Consensus 96 ~d~~----~~~I~~~~~~g~~--------------~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~-~~~~~I~~~~~dg~ 156 (267)
T 1npe_A 96 TDSQ----LDRIEVAKMDGTQ--------------RRVLFDTGLVNPRGIVTDPVRGNLYWTDWN-RDNPKIETSHMDGT 156 (267)
T ss_dssp EETT----TTEEEEEETTSCS--------------CEEEECSSCSSEEEEEEETTTTEEEEEECC-SSSCEEEEEETTSC
T ss_pred EECC----CCEEEEEEcCCCC--------------EEEEEECCCCCccEEEEeeCCCEEEEEECC-CCCcEEEEEecCCC
Confidence 6432 4679999987521 111211 11 11223478888888876532 23578999998765
Q ss_pred CCeEEeccCCCCceeeeEEEecC-CEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCC
Q 003878 395 NDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFL 473 (789)
Q Consensus 395 ~~~~~l~~~~~~~~i~~v~~~~~-~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~ 473 (789)
. .+.+.... ...-.+++++++ +.||+..... .+|++++++++.. +.+........+++. +++.++++-.
T Consensus 157 ~-~~~~~~~~-~~~P~gia~d~~~~~lyv~d~~~--~~I~~~~~~g~~~-~~~~~~~~~P~gi~~--d~~~lyva~~--- 226 (267)
T 1npe_A 157 N-RRILAQDN-LGLPNGLTFDAFSSQLCWVDAGT--HRAECLNPAQPGR-RKVLEGLQYPFAVTS--YGKNLYYTDW--- 226 (267)
T ss_dssp C-CEEEECTT-CSCEEEEEEETTTTEEEEEETTT--TEEEEEETTEEEE-EEEEECCCSEEEEEE--ETTEEEEEET---
T ss_pred C-cEEEEECC-CCCCcEEEEcCCCCEEEEEECCC--CEEEEEecCCCce-EEEecCCCCceEEEE--eCCEEEEEEC---
Confidence 4 33443222 234567888873 5777765444 4899999974332 222111111223443 4667776432
Q ss_pred CCcEEEEEECCCCC
Q 003878 474 IPGIVYQCNLKTET 487 (789)
Q Consensus 474 ~P~~ly~~dl~tg~ 487 (789)
....++++|..+++
T Consensus 227 ~~~~v~~~d~~~g~ 240 (267)
T 1npe_A 227 KTNSVIAMDLAISK 240 (267)
T ss_dssp TTTEEEEEETTTTE
T ss_pred CCCeEEEEeCCCCC
Confidence 34689999998884
No 431
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=97.97 E-value=0.0023 Score=66.70 Aligned_cols=194 Identities=11% Similarity=0.018 Sum_probs=115.3
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++|+|+++.|+++.. ...+|++++..+... ..+..+. ....+.+++||+ |++.
T Consensus 16 Egp~w~~~~~~l~~~d~------------------~~~~i~~~d~~~~~~---~~~~~~~---~~~~i~~~~dG~-l~v~ 70 (297)
T 3g4e_A 16 ESPVWEEVSNSLLFVDI------------------PAKKVCRWDSFTKQV---QRVTMDA---PVSSVALRQSGG-YVAT 70 (297)
T ss_dssp EEEEEETTTTEEEEEET------------------TTTEEEEEETTTCCE---EEEECSS---CEEEEEEBTTSS-EEEE
T ss_pred cCCeEECCCCEEEEEEC------------------CCCEEEEEECCCCcE---EEEeCCC---ceEEEEECCCCC-EEEE
Confidence 68999999999998732 235689998876432 3344332 345788999999 4444
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec---c--cc-ceeEEEecCCCEEEEEECCC--------CCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID---G--FD-AQYEVIANDDTVFTFLTNKD--------APK 383 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~---~--~~-~~~~~~s~dG~~l~~~tn~~--------~~~ 383 (789)
. ...|+++|.+++. +..+.. + .. .....++++|+ ||+.+... ...
T Consensus 71 ~------~~~l~~~d~~~g~--------------~~~~~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~ 129 (297)
T 3g4e_A 71 I------GTKFCALNWKEQS--------------AVVLATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQ 129 (297)
T ss_dssp E------TTEEEEEETTTTE--------------EEEEEECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTC
T ss_pred E------CCeEEEEECCCCc--------------EEEEEecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCC
Confidence 3 2458999987642 111111 0 00 11133788887 66655321 245
Q ss_pred ceEEEEECCCCCCeEEeccCCCCceeeeEEEecCC-EEEEEEEeCCeEEEEEEEC--CCCcee--eec-ccC--CeeEEE
Q 003878 384 YKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLN-QMIVSYLSDVKYVLQIRDL--KNGSLL--HQL-PIE--IGSVNA 455 (789)
Q Consensus 384 ~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~-~lv~~~~~~g~~~L~~~dl--~tG~~~--~~l-~~~--~~~v~~ 455 (789)
..|++++.++ + ...+.... ....++++++++ .+++....++ +|+++++ ++|... +.+ .++ .+...+
T Consensus 130 ~~l~~~d~~g-~-~~~~~~~~--~~pngi~~spdg~~lyv~~~~~~--~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g 203 (297)
T 3g4e_A 130 GALYSLFPDH-H-VKKYFDQV--DISNGLDWSLDHKIFYYIDSLSY--SVDAFDYDLQTGQISNRRSVYKLEKEEQIPDG 203 (297)
T ss_dssp EEEEEECTTS-C-EEEEEEEE--SBEEEEEECTTSCEEEEEEGGGT--EEEEEEECTTTCCEEEEEEEEECCGGGCEEEE
T ss_pred cEEEEEECCC-C-EEEEeecc--ccccceEEcCCCCEEEEecCCCC--cEEEEeccCCCCcccCcEEEEECCCCCCCCCe
Confidence 6899998753 3 33333322 234578888754 4666554443 7888876 456431 111 122 345567
Q ss_pred eecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 456 ISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 456 ~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+..++++. ++++.. ....+++||.++|+
T Consensus 204 ~~~d~~G~-lwva~~---~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 204 MCIDAEGK-LWVACY---NGGRVIRLDPVTGK 231 (297)
T ss_dssp EEEBTTSC-EEEEEE---TTTEEEEECTTTCC
T ss_pred eEECCCCC-EEEEEc---CCCEEEEEcCCCce
Confidence 77888885 665542 23579999998885
No 432
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=97.96 E-value=0.0011 Score=68.74 Aligned_cols=192 Identities=11% Similarity=0.087 Sum_probs=112.2
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++|+|||+.|+++.. ....|++++..+. ...+..+. ....++.++|||+.++ .
T Consensus 31 eg~~~d~~g~~l~~~~~------------------~~~~i~~~~~~~~----~~~~~~~~--~~~~~l~~~~dg~l~v-~ 85 (296)
T 3e5z_A 31 EGPVYVPARSAVIFSDV------------------RQNRTWAWSDDGQ----LSPEMHPS--HHQNGHCLNKQGHLIA-C 85 (296)
T ss_dssp EEEEEEGGGTEEEEEEG------------------GGTEEEEEETTSC----EEEEESSC--SSEEEEEECTTCCEEE-E
T ss_pred cCCeEeCCCCEEEEEeC------------------CCCEEEEEECCCC----eEEEECCC--CCcceeeECCCCcEEE-E
Confidence 68999999998888743 2346888888764 23343332 2345789999998543 3
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec---cc---cceeEEEecCCCEEEEEEC-------------
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID---GF---DAQYEVIANDDTVFTFLTN------------- 378 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~---~~---~~~~~~~s~dG~~l~~~tn------------- 378 (789)
.. . ...|++++.+++. ...+.. +. ......++++|+ +|+...
T Consensus 86 ~~-~---~~~i~~~d~~~g~--------------~~~~~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~ 146 (296)
T 3e5z_A 86 SH-G---LRRLERQREPGGE--------------WESIADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGG 146 (296)
T ss_dssp ET-T---TTEEEEECSTTCC--------------EEEEECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCC
T ss_pred ec-C---CCeEEEEcCCCCc--------------EEEEeeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccc
Confidence 21 1 3568999986642 111111 00 011234788886 555321
Q ss_pred -CCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECC-CCce---eeecccCCeeE
Q 003878 379 -KDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLK-NGSL---LHQLPIEIGSV 453 (789)
Q Consensus 379 -~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~-tG~~---~~~l~~~~~~v 453 (789)
.+.....|++++.+ +. .+.+.... ....++++++++.+++....+ ..|++++++ +|+. .+.+....+..
T Consensus 147 ~~~~~~~~l~~~~~~-g~-~~~~~~~~--~~~~gi~~s~dg~~lv~~~~~--~~i~~~~~~~~g~~~~~~~~~~~~~~~p 220 (296)
T 3e5z_A 147 EMELPGRWVFRLAPD-GT-LSAPIRDR--VKPNGLAFLPSGNLLVSDTGD--NATHRYCLNARGETEYQGVHFTVEPGKT 220 (296)
T ss_dssp CCCSSSCEEEEECTT-SC-EEEEECCC--SSEEEEEECTTSCEEEEETTT--TEEEEEEECSSSCEEEEEEEECCSSSCC
T ss_pred cccCCCcEEEEECCC-CC-EEEeecCC--CCCccEEECCCCCEEEEeCCC--CeEEEEEECCCCcCcCCCeEeeCCCCCC
Confidence 11124689999877 44 44443332 345678888866655443333 478999886 4543 22222122233
Q ss_pred EEeecccCCcEEEEEEcCCCCCcEEEEEECCC
Q 003878 454 NAISARREDSVVFISFTSFLIPGIVYQCNLKT 485 (789)
Q Consensus 454 ~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~t 485 (789)
.++.++++++ ++++. ...+++||...
T Consensus 221 ~~i~~d~~G~-l~v~~-----~~~v~~~~~~g 246 (296)
T 3e5z_A 221 DGLRVDAGGL-IWASA-----GDGVHVLTPDG 246 (296)
T ss_dssp CSEEEBTTSC-EEEEE-----TTEEEEECTTS
T ss_pred CeEEECCCCC-EEEEc-----CCeEEEECCCC
Confidence 3566778886 56554 46899999863
No 433
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.96 E-value=0.00074 Score=69.17 Aligned_cols=199 Identities=13% Similarity=0.108 Sum_probs=122.9
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++|+||| .||.+... .....|...++.++.....+ ..+..+ + ...++.+|+.|+..
T Consensus 24 ~Gl~~~~dg-~Lyvstg~----------------~~~s~v~~iD~~tg~v~~~i--~l~~~~-f--geGi~~~g~~lyv~ 81 (266)
T 2iwa_A 24 QGLVYAEND-TLFESTGL----------------YGRSSVRQVALQTGKVENIH--KMDDSY-F--GEGLTLLNEKLYQV 81 (266)
T ss_dssp EEEEECSTT-EEEEEECS----------------TTTCEEEEEETTTCCEEEEE--ECCTTC-C--EEEEEEETTEEEEE
T ss_pred ccEEEeCCC-eEEEECCC----------------CCCCEEEEEECCCCCEEEEE--ecCCCc-c--eEEEEEeCCEEEEE
Confidence 689999985 67766421 12456888998876533222 222222 2 23455568888776
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCe
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW 397 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~ 397 (789)
... .+.++++|.++.. ....+..+....+. +++||+++|+ +| + ..+|..+|.++.+..
T Consensus 82 t~~----~~~v~viD~~t~~-------------v~~~i~~g~~~g~g-lt~Dg~~l~v-s~-g--s~~l~viD~~t~~v~ 139 (266)
T 2iwa_A 82 VWL----KNIGFIYDRRTLS-------------NIKNFTHQMKDGWG-LATDGKILYG-SD-G--TSILYEIDPHTFKLI 139 (266)
T ss_dssp ETT----CSEEEEEETTTTE-------------EEEEEECCSSSCCE-EEECSSSEEE-EC-S--SSEEEEECTTTCCEE
T ss_pred Eec----CCEEEEEECCCCc-------------EEEEEECCCCCeEE-EEECCCEEEE-EC-C--CCeEEEEECCCCcEE
Confidence 532 4679999998742 11222112011233 6789998885 55 2 368999999887633
Q ss_pred EEeccC-C--CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCC-------------eeEEEeecccC
Q 003878 398 FEVIPE-A--ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEI-------------GSVNAISARRE 461 (789)
Q Consensus 398 ~~l~~~-~--~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~-------------~~v~~~s~s~d 461 (789)
..+.-. . +-..+..+.+.+ +.+++.... ...|.++|+++|+.+..|.++. ....+++++++
T Consensus 140 ~~I~Vg~~~~p~~~~nele~~d-g~lyvn~~~--~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~ 216 (266)
T 2iwa_A 140 KKHNVKYNGHRVIRLNELEYIN-GEVWANIWQ--TDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQE 216 (266)
T ss_dssp EEEECEETTEECCCEEEEEEET-TEEEEEETT--SSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETT
T ss_pred EEEEECCCCcccccceeEEEEC-CEEEEecCC--CCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCC
Confidence 333211 1 112355677774 777755433 3489999999999877776531 24467889999
Q ss_pred CcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 462 DSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 462 ~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
+++++++-..+ +.+|.+++.+.
T Consensus 217 ~~~lfVTgk~~---~~v~~i~l~~~ 238 (266)
T 2iwa_A 217 NKRIFVTGKLW---PKLFEIKLHLV 238 (266)
T ss_dssp TTEEEEEETTC---SEEEEEEEEEC
T ss_pred CCEEEEECCCC---CeEEEEEEecc
Confidence 99999876544 78888887543
No 434
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=97.94 E-value=3.2e-05 Score=82.52 Aligned_cols=102 Identities=15% Similarity=0.033 Sum_probs=68.0
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHH-HHHHHHcCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISA-SEYLISAGY 614 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~-~~~L~~~~~ 614 (789)
+..|.|+++||..+.. ..|.. +...|. .++.|+.++.+|.+. ... ...+++++.+. ++.+.+..
T Consensus 99 g~~~~l~~lhg~~~~~--~~~~~-l~~~L~-~~~~v~~~d~~g~~~---~~~-------~~~~~~~~a~~~~~~i~~~~- 163 (329)
T 3tej_A 99 GNGPTLFCFHPASGFA--WQFSV-LSRYLD-PQWSIIGIQSPRPNG---PMQ-------TAANLDEVCEAHLATLLEQQ- 163 (329)
T ss_dssp CSSCEEEEECCTTSCC--GGGGG-GGGTSC-TTCEEEEECCCTTTS---HHH-------HCSSHHHHHHHHHHHHHHHC-
T ss_pred CCCCcEEEEeCCcccc--hHHHH-HHHhcC-CCCeEEEeeCCCCCC---CCC-------CCCCHHHHHHHHHHHHHHhC-
Confidence 3457899999977653 23332 233444 789999999998643 111 12345555443 33333321
Q ss_pred CCCCcEEEEeeChHHHHHHHHHHh---CCCceeEEEecCCcc
Q 003878 615 TQSRKLCIEGGSNGGLLVGACINQ---RPDLFGCALAHVGVM 653 (789)
Q Consensus 615 ~d~~~i~i~G~S~GG~l~~~~~~~---~pd~f~a~v~~~p~~ 653 (789)
...++.++|||+||.++..++.+ +|+....+|+..+..
T Consensus 164 -~~~~~~l~G~S~Gg~ia~~~a~~L~~~~~~v~~lvl~d~~~ 204 (329)
T 3tej_A 164 -PHGPYYLLGYSLGGTLAQGIAARLRARGEQVAFLGLLDTWP 204 (329)
T ss_dssp -SSSCEEEEEETHHHHHHHHHHHHHHHTTCCEEEEEEESCCC
T ss_pred -CCCCEEEEEEccCHHHHHHHHHHHHhcCCcccEEEEeCCCC
Confidence 22589999999999999999998 999999888776544
No 435
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=97.94 E-value=0.00066 Score=74.89 Aligned_cols=172 Identities=12% Similarity=0.033 Sum_probs=94.4
Q ss_pred EEEEEECCCCCCCcE-EEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEe
Q 003878 276 EFYYHFLGTKQSEDI-LCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVK 354 (789)
Q Consensus 276 ~i~~~~lg~~~~~~~-~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 354 (789)
.|.++++.+...... ..... +...+..+.+ +|++|+.... ...|.++|+.++. ....
T Consensus 234 ~i~vwd~~~~~~~~~~~~~~~--~~~~v~~~~~--~~~~l~s~~~-----dg~i~vwd~~~~~-------------~~~~ 291 (435)
T 1p22_A 234 SIAVWDMASPTDITLRRVLVG--HRAAVNVVDF--DDKYIVSASG-----DRTIKVWNTSTCE-------------FVRT 291 (435)
T ss_dssp CEEEEECSSSSCCEEEEEECC--CSSCEEEEEE--ETTEEEEEET-----TSEEEEEETTTCC-------------EEEE
T ss_pred cEEEEeCCCCCCceeeeEecC--CCCcEEEEEe--CCCEEEEEeC-----CCeEEEEECCcCc-------------EEEE
Confidence 488888876543211 12222 2333445555 8888876653 3558899998742 1222
Q ss_pred eeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEE
Q 003878 355 LIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQI 434 (789)
Q Consensus 355 l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~ 434 (789)
+..... ....+..+++.++..+. ++.|..+|+.+++....+..+. ..+..+.+. +..+++...++ .|.+
T Consensus 292 ~~~~~~-~v~~~~~~~~~l~~g~~----dg~i~iwd~~~~~~~~~~~~h~--~~v~~~~~~--~~~l~sg~~dg--~i~v 360 (435)
T 1p22_A 292 LNGHKR-GIACLQYRDRLVVSGSS----DNTIRLWDIECGACLRVLEGHE--ELVRCIRFD--NKRIVSGAYDG--KIKV 360 (435)
T ss_dssp EECCSS-CEEEEEEETTEEEEEET----TSCEEEEETTTCCEEEEECCCS--SCEEEEECC--SSEEEEEETTS--CEEE
T ss_pred EcCCCC-cEEEEEeCCCEEEEEeC----CCeEEEEECCCCCEEEEEeCCc--CcEEEEEec--CCEEEEEeCCC--cEEE
Confidence 222111 22223346776665443 3579999998876334443333 456777773 55667777776 6888
Q ss_pred EECCCCc---------eeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 435 RDLKNGS---------LLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 435 ~dl~tG~---------~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
||+.+++ ....+....+.+..+++ ++..++ +. ..-+.+..||+.++
T Consensus 361 wd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~~~l~-s~---s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 361 WDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DEFQIV-SS---SHDDTILIWDFLND 415 (435)
T ss_dssp EEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CSSCEE-EC---CSSSEEEEEC----
T ss_pred EECCCCCCccccccchheeeccCCCCCeEEEEe--CCCEEE-EE---eCCCEEEEEECCCC
Confidence 9986544 22333333444544554 555443 22 34568899988766
No 436
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.89 E-value=0.0023 Score=64.98 Aligned_cols=194 Identities=10% Similarity=0.067 Sum_probs=105.8
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
..++++++||+ |+++.. ...|++++..+... ..+... ......++.+++||+ |++
T Consensus 69 p~~i~~~~~g~-l~v~~~-------------------~~~i~~~d~~~~~~---~~~~~~-~~~~p~~i~~~~~g~-l~v 123 (270)
T 1rwi_B 69 PQGLAVDGAGT-VYVTDF-------------------NNRVVTLAAGSNNQ---TVLPFD-GLNYPEGLAVDTQGA-VYV 123 (270)
T ss_dssp CCCEEECTTCC-EEEEET-------------------TTEEEEECTTCSCC---EECCCC-SCSSEEEEEECTTCC-EEE
T ss_pred cceeEECCCCC-EEEEcC-------------------CCEEEEEeCCCceE---eeeecC-CcCCCcceEECCCCC-EEE
Confidence 36788999987 666532 23577777654321 111111 112345788999997 444
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc-cceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
.... ...|++++..+.. ......... ......++++|+ +|+.... +..|++++.++..
T Consensus 124 ~~~~----~~~i~~~~~~~~~-------------~~~~~~~~~~~p~~i~~~~~g~-l~v~~~~---~~~i~~~~~~~~~ 182 (270)
T 1rwi_B 124 ADRG----NNRVVKLAAGSKT-------------QTVLPFTGLNDPDGVAVDNSGN-VYVTDTD---NNRVVKLEAESNN 182 (270)
T ss_dssp EEGG----GTEEEEECTTCCS-------------CEECCCCSCCSCCCEEECTTCC-EEEEEGG---GTEEEEECTTTCC
T ss_pred EECC----CCEEEEEECCCce-------------eEeeccccCCCceeEEEeCCCC-EEEEECC---CCEEEEEecCCCc
Confidence 4321 3568888654421 010011111 111234678886 6655432 4689999987765
Q ss_pred CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-CeeEEEeecccCCcEEEEEEcCCCC
Q 003878 396 DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-IGSVNAISARREDSVVFISFTSFLI 474 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~-~~~v~~~s~s~d~~~l~~~~ss~~~ 474 (789)
... ..........++.+.+++.+++....++ .|++++.++... ..+... .....++.+++++. ++++-. .
T Consensus 183 -~~~-~~~~~~~~p~~i~~d~~g~l~v~~~~~~--~v~~~~~~~~~~-~~~~~~~~~~p~~i~~~~~g~-l~v~~~---~ 253 (270)
T 1rwi_B 183 -QVV-LPFTDITAPWGIAVDEAGTVYVTEHNTN--QVVKLLAGSTTS-TVLPFTGLNTPLAVAVDSDRT-VYVADR---G 253 (270)
T ss_dssp -EEE-CCCSSCCSEEEEEECTTCCEEEEETTTS--CEEEECTTCSCC-EECCCCSCSCEEEEEECTTCC-EEEEEG---G
T ss_pred -eEe-ecccCCCCceEEEECCCCCEEEEECCCC--cEEEEcCCCCcc-eeeccCCCCCceeEEECCCCC-EEEEEC---C
Confidence 222 2222124466788887667777654443 688999874332 333222 23455677788876 665532 2
Q ss_pred CcEEEEEECCC
Q 003878 475 PGIVYQCNLKT 485 (789)
Q Consensus 475 P~~ly~~dl~t 485 (789)
-.+|..+++..
T Consensus 254 ~~~v~~~~~~~ 264 (270)
T 1rwi_B 254 NDRVVKLTSLE 264 (270)
T ss_dssp GTEEEEECCCG
T ss_pred CCEEEEEcCCC
Confidence 45777777643
No 437
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=97.88 E-value=6.7e-06 Score=91.03 Aligned_cols=113 Identities=12% Similarity=0.053 Sum_probs=76.2
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCe---EEEEEeecCCCCC----------ChhHHhccc-----------
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGA---VFCIANIRGGGEY----------GEEWHKGGA----------- 591 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~---~v~~~~~RG~g~~----------g~~~~~~~~----------- 591 (789)
++.|.||++||..+... .|.. +...|.++|| .|+.+|+||.|.. |. ....+.
T Consensus 20 ~~~ppVVLlHG~g~s~~--~w~~-la~~La~~Gy~~~~Via~DlpG~G~S~~~~~Dv~~~G~-~~~~G~n~~p~id~~~l 95 (484)
T 2zyr_A 20 EDFRPVVFVHGLAGSAG--QFES-QGMRFAANGYPAEYVKTFEYDTISWALVVETDMLFSGL-GSEFGLNISQIIDPETL 95 (484)
T ss_dssp -CCCCEEEECCTTCCGG--GGHH-HHHHHHHTTCCGGGEEEECCCHHHHHHHTTTSTTTTTG-GGHHHHHHGGGSCHHHH
T ss_pred CCCCEEEEECCCCCCHH--HHHH-HHHHHHHcCCCcceEEEEECCCCCcccccccccccccc-ccccccccccccccccc
Confidence 35678999999866543 3443 4455666899 6999999986521 10 000000
Q ss_pred --------ccCCcchHHHHHHHHHHHHHcCCCCCCcEEEEeeChHHHHHHHHHHhCC---CceeEEEecCCccc
Q 003878 592 --------LAKKQNCFDDFISASEYLISAGYTQSRKLCIEGGSNGGLLVGACINQRP---DLFGCALAHVGVMD 654 (789)
Q Consensus 592 --------~~~~~~~~~D~~~~~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~p---d~f~a~v~~~p~~d 654 (789)
.......++++.+.++.++++- ..+++.++|||+||.++..++.++| +.++++|+..|..+
T Consensus 96 ~~v~~~~~~~~~~~~~~dla~~L~~ll~~l--g~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 96 DKILSKSRERLIDETFSRLDRVIDEALAES--GADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHHTSCHHHHHHHHHHHHHHHHHHHHHHH--CCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred cccccccccCchhhhHHHHHHHHHHHHHHh--CCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 0011234577777888877652 2368999999999999999999988 48999998887654
No 438
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.80 E-value=0.0014 Score=69.98 Aligned_cols=206 Identities=8% Similarity=0.012 Sum_probs=104.6
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCC----CCeeEEEEEEecCCc
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPE----HPKYIFSGHVTEDGQ 312 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~----~~~~~~~~~~SpDG~ 312 (789)
..+++++|||+ |++.-... ......+|+++++.++.. +..+..+. ...+..++.+++++.
T Consensus 69 p~gv~~d~~g~-L~v~D~g~-------------~~~~~~~i~~~d~~tg~~--~~~~~~~~~~~~~~~~~~~v~vd~~~g 132 (343)
T 2qe8_A 69 VLGIKSDGNGI-VWMLDNGN-------------QSKSVPKLVAWDTLNNQL--SRVIYLPPPITLSNSFVNDLAVDLIHN 132 (343)
T ss_dssp EEEEEECSSSE-EEEEECHH-------------HHTSCCEEEEEETTTTEE--EEEEECCTTTSCTTCCCCEEEEETTTT
T ss_pred eeEEEEcCCCc-EEEEcCCC-------------CcCCCCeEEEEECCCCeE--EEEEECChhhcccccccceEEEecCCC
Confidence 36788999875 66552110 001135688888876532 12222221 112335788998877
Q ss_pred EEEEEEEcCCCCceEEEEEECCCCCCCcccccccC---CCCccEeeecc----------------ccceeEEEecCCCEE
Q 003878 313 YLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRD---GLLPFVKLIDG----------------FDAQYEVIANDDTVF 373 (789)
Q Consensus 313 ~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~---~~~~~~~l~~~----------------~~~~~~~~s~dG~~l 373 (789)
.+++.... ......|+++|++++.. .++.... ...+......+ ....-..++|||+.|
T Consensus 133 ~~yvtd~~-~~~~~~i~v~d~~~g~~--~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~l 209 (343)
T 2qe8_A 133 FVYISDPA-PDDKAALIRVDLQTGLA--ARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWL 209 (343)
T ss_dssp EEEEEECC-SGGGCEEEEEETTTCCE--EEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEE
T ss_pred EEEEEcCc-cCCCCeEEEEECCCCCE--EEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEE
Confidence 77665431 11246799999876421 1110000 00000000000 001123489999999
Q ss_pred EEEECCCCCCceEEEEECC---CCC--------CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCce
Q 003878 374 TFLTNKDAPKYKIIRVDLK---EPN--------DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 374 ~~~tn~~~~~~~L~~~dl~---~~~--------~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~ 442 (789)
|+.... ..+|++++.. .+. .... ..+. ....++++++++.+++....++ .|.+|+.++|+.
T Consensus 210 y~~~~~---~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~g~~--g~pdgia~d~~G~l~va~~~~~--~V~~~d~~~G~~ 281 (343)
T 2qe8_A 210 YLSPMH---STSMYRIKSADLSNLQLTDAELGSKIER-YSEK--PICDGISIDKDHNIYVGDLAHS--AIGVITSADRAY 281 (343)
T ss_dssp EEEESS---CSEEEEEEHHHHTCTTCCHHHHHTTCEE-EEEC--CSCSCEEECTTCCEEEEEGGGT--EEEEEETTTTEE
T ss_pred EEEeCC---CCeEEEEEHHHhcCCCCChhhhhcceEe-cccC--CCCceEEECCCCCEEEEccCCC--eEEEEECCCCCE
Confidence 987543 2489998742 111 0111 1111 1234678887677777655443 899999954764
Q ss_pred eeecccC-CeeEEEeecccCCcEEEEEEc
Q 003878 443 LHQLPIE-IGSVNAISARREDSVVFISFT 470 (789)
Q Consensus 443 ~~~l~~~-~~~v~~~s~s~d~~~l~~~~s 470 (789)
...+..+ .....++++++++. ++++.+
T Consensus 282 ~~~~~~~~~~~p~~va~~~~g~-l~v~~~ 309 (343)
T 2qe8_A 282 KLLVTDEKLSWTDSFNFGSDGY-LYFDCN 309 (343)
T ss_dssp EEEEECGGGSCEEEEEECTTSC-EEEEEC
T ss_pred EEEEECCceecCCeeEECCCCc-EEEEeC
Confidence 2222223 22345667777654 555544
No 439
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.79 E-value=0.00043 Score=76.76 Aligned_cols=124 Identities=8% Similarity=0.005 Sum_probs=74.8
Q ss_pred EEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCce----ecccccccccccccCccceeeeeecccccccccccccc
Q 003878 133 ALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIV----EADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYL 208 (789)
Q Consensus 133 ~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 208 (789)
.+..++|||||++||.+.. .|+...+|+|||+.++.. ....+.... .+..| .+
T Consensus 94 ~v~~l~~spdg~~lav~~~-sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~-~~~~h---------------~~------ 150 (434)
T 2oit_A 94 PIHHLALSCDNLTLSACMM-SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHK-LLKDA---------------GG------ 150 (434)
T ss_dssp CEEEEEECTTSCEEEEEEE-ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEE-CCCSG---------------GG------
T ss_pred cccEEEEcCCCCEEEEEEe-ccCCCceEEEEEccccccCCcCCcceeeeee-ccCCC---------------CC------
Confidence 3788999999999987543 355578999999987510 000000000 00000 00
Q ss_pred ccceeeEEEeeeccccceeeeeeecccccceEEEEeC-CcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCC
Q 003878 209 RGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHD-SKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQS 287 (789)
Q Consensus 209 ~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspD-g~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~ 287 (789)
....++|+|+ ++.|+....+ ..|++|++.+..
T Consensus 151 ---------------------------~V~~v~~~p~~~~~las~s~D-------------------g~v~iwD~~~~~- 183 (434)
T 2oit_A 151 ---------------------------MVIDMKWNPTVPSMVAVCLAD-------------------GSIAVLQVTETV- 183 (434)
T ss_dssp ---------------------------SEEEEEECSSCTTEEEEEETT-------------------SCEEEEEESSSE-
T ss_pred ---------------------------ceEEEEECCCCCCEEEEEECC-------------------CeEEEEEcCCCc-
Confidence 2578999998 5656544332 348888887652
Q ss_pred CcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECC
Q 003878 288 EDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLS 334 (789)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~ 334 (789)
...... .+...+..++|||||++|+....+ ..|.++|+.
T Consensus 184 -~~~~~~--~~~~~v~~v~wspdg~~lasgs~d-----g~v~iwd~~ 222 (434)
T 2oit_A 184 -KVCATL--PSTVAVTSVCWSPKGKQLAVGKQN-----GTVVQYLPT 222 (434)
T ss_dssp -EEEEEE--CGGGCEEEEEECTTSSCEEEEETT-----SCEEEECTT
T ss_pred -ceeecc--CCCCceeEEEEcCCCCEEEEEcCC-----CcEEEEccC
Confidence 111111 123346789999999999877643 348888887
No 440
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.78 E-value=0.0035 Score=63.58 Aligned_cols=194 Identities=10% Similarity=0.088 Sum_probs=119.3
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.++.|+ |+ .||.+... .....|.+.++.++.....+ ..+. .. .+...+++|+.|+..
T Consensus 46 qGL~~~-~~-~LyestG~----------------~g~S~v~~vD~~Tgkv~~~~--~l~~-~~--FgeGit~~g~~ly~l 102 (262)
T 3nol_A 46 EGFFYR-NG-YFYESTGL----------------NGRSSIRKVDIESGKTLQQI--ELGK-RY--FGEGISDWKDKIVGL 102 (262)
T ss_dssp EEEEEE-TT-EEEEEEEE----------------TTEEEEEEECTTTCCEEEEE--ECCT-TC--CEEEEEEETTEEEEE
T ss_pred ceEEEE-CC-EEEEECCC----------------CCCceEEEEECCCCcEEEEE--ecCC-cc--ceeEEEEeCCEEEEE
Confidence 788898 65 77776432 12346888888876543332 2222 12 234567788888776
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCe
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW 397 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~ 397 (789)
... .+.++++|.++.+ ....+..+. ..+. +++||+.||+ ++ + ..+|..+|.++.+..
T Consensus 103 tw~----~~~v~v~D~~t~~-------------~~~ti~~~~-eG~g-lt~dg~~L~~-Sd--G-s~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 103 TWK----NGLGFVWNIRNLR-------------QVRSFNYDG-EGWG-LTHNDQYLIM-SD--G-TPVLRFLDPESLTPV 159 (262)
T ss_dssp ESS----SSEEEEEETTTCC-------------EEEEEECSS-CCCC-EEECSSCEEE-CC--S-SSEEEEECTTTCSEE
T ss_pred Eee----CCEEEEEECccCc-------------EEEEEECCC-CceE-EecCCCEEEE-EC--C-CCeEEEEcCCCCeEE
Confidence 532 4679999998842 112221111 1222 4678888775 33 2 468999999887622
Q ss_pred EEeccC---CCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC------------CeeEEEeecccCC
Q 003878 398 FEVIPE---AERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE------------IGSVNAISARRED 462 (789)
Q Consensus 398 ~~l~~~---~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~------------~~~v~~~s~s~d~ 462 (789)
..+.-. .+-..+..+.+.+ +.+++..... ..|.++|+++|+.+..|.+. .....++++++++
T Consensus 160 ~~I~V~~~g~~~~~lNELe~~~-G~lyan~w~~--~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 160 RTITVTAHGEELPELNELEWVD-GEIFANVWQT--NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp EEEECEETTEECCCEEEEEEET-TEEEEEETTS--SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred EEEEeccCCccccccceeEEEC-CEEEEEEccC--CeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 332211 1113344577775 7877655333 48999999999987777653 1245688999999
Q ss_pred cEEEEEEcCCCCCcEEEEEEC
Q 003878 463 SVVFISFTSFLIPGIVYQCNL 483 (789)
Q Consensus 463 ~~l~~~~ss~~~P~~ly~~dl 483 (789)
+.++++--.| +.+|++.+
T Consensus 237 ~~lfVTGK~W---p~~~ev~~ 254 (262)
T 3nol_A 237 HRLFVTGKLW---PKVFEITL 254 (262)
T ss_dssp TEEEEEETTC---SEEEEEEE
T ss_pred CEEEEECCCC---CceEEEEE
Confidence 9999877655 66776543
No 441
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.74 E-value=0.041 Score=57.93 Aligned_cols=199 Identities=11% Similarity=0.052 Sum_probs=118.4
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
..++|.+.+..||++-. ...+|++.++.+......++......+ .++++.+.++.|++.
T Consensus 38 ~~ld~d~~~~~lyw~D~------------------~~~~I~r~~~~g~~~~~~~~~~~l~~p---~glavd~~~g~ly~~ 96 (318)
T 3sov_A 38 AAVDFVFSHGLIYWSDV------------------SEEAIKRTEFNKTESVQNVVVSGLLSP---DGLACDWLGEKLYWT 96 (318)
T ss_dssp EEEEEEGGGTEEEEEET------------------TTTEEEEEETTSSSCCCEEEEECCSCC---CEEEEETTTTEEEEE
T ss_pred EEEEEEeCCCEEEEEEC------------------CCCcEEEEEccCCCceEEEEcCCCCCc---cEEEEEcCCCeEEEE
Confidence 57899998889988732 234688888876533233333332222 357888888888776
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-ccccc-eeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~~~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
-.. ...|.++++++.. ...+. ..... .-..+.|.+..||+.... .+.+|+++++++..
T Consensus 97 d~~----~~~I~~~~~dG~~--------------~~~l~~~~~~~P~giavdp~~g~ly~td~~--~~~~I~r~~~dG~~ 156 (318)
T 3sov_A 97 DSE----TNRIEVSNLDGSL--------------RKVLFWQELDQPRAIALDPSSGFMYWTDWG--EVPKIERAGMDGSS 156 (318)
T ss_dssp ETT----TTEEEEEETTSCS--------------CEEEECSSCSSEEEEEEEGGGTEEEEEECS--SSCEEEEEETTSCS
T ss_pred ECC----CCEEEEEECCCCc--------------EEEEEeCCCCCccEEEEeCCCCEEEEEecC--CCCEEEEEEcCCCC
Confidence 422 4578999987631 11222 22211 112367777888876432 35789999998754
Q ss_pred CeEEeccCCCCceeeeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceeeeccc-CCeeEEEeecccCCcEEEEEEcCCC
Q 003878 396 DWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI-EIGSVNAISARREDSVVFISFTSFL 473 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~-~~~~v~~~s~s~d~~~l~~~~ss~~ 473 (789)
.+.++... -..-.++++++ ++.||++-.. ..+|++++++ |...+.+.. ......+++. +++.++++- .
T Consensus 157 -~~~~~~~~-l~~Pnglavd~~~~~lY~aD~~--~~~I~~~d~d-G~~~~~~~~~~~~~P~glav--~~~~lywtd---~ 226 (318)
T 3sov_A 157 -RFIIINSE-IYWPNGLTLDYEEQKLYWADAK--LNFIHKSNLD-GTNRQAVVKGSLPHPFALTL--FEDILYWTD---W 226 (318)
T ss_dssp -CEEEECSS-CSCEEEEEEETTTTEEEEEETT--TTEEEEEETT-SCSCEEEECSCCSCEEEEEE--ETTEEEEEE---T
T ss_pred -eEEEEECC-CCCccEEEEeccCCEEEEEECC--CCEEEEEcCC-CCceEEEecCCCCCceEEEE--eCCEEEEEe---c
Confidence 34444432 23346788885 4677776443 3489999997 543233322 1222234444 355677652 2
Q ss_pred CCcEEEEEECCCCC
Q 003878 474 IPGIVYQCNLKTET 487 (789)
Q Consensus 474 ~P~~ly~~dl~tg~ 487 (789)
....|++++..+|+
T Consensus 227 ~~~~V~~~~~~~G~ 240 (318)
T 3sov_A 227 STHSILACNKYTGE 240 (318)
T ss_dssp TTTEEEEEETTTCC
T ss_pred CCCeEEEEECCCCC
Confidence 45689999987775
No 442
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=97.74 E-value=0.00075 Score=71.52 Aligned_cols=123 Identities=13% Similarity=0.054 Sum_probs=58.7
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCC-CCeeEEEEEEecCCcEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPE-HPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~-~~~~~~~~~~SpDG~~l~~ 316 (789)
...+|||||+.++....+... .+ ........++.+|+..++..-.++.+..++ +...+.+..+ +|..++-
T Consensus 230 ~~vafSpdG~~lvs~s~~~~~--w~-----laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lAS 300 (356)
T 2w18_A 230 CHKAYSEMGLLFIVLSHPCAK--ES-----ESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAA 300 (356)
T ss_dssp EEEEEEETTEEEEEEC-------------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEE
T ss_pred EEEEECCCCCEEEEeccCCCc--ce-----eeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEE
Confidence 456899999988765432100 00 001234566888887655322222221121 1111223333 3666654
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee--EEEecCCCEEEEEECCCCCCceEEEEEC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY--EVIANDDTVFTFLTNKDAPKYKIIRVDL 391 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~s~dG~~l~~~tn~~~~~~~L~~~dl 391 (789)
.+.+ ..|.++|+.++. ....+....+... ..|+|||+.|+--+ .+..|.++|+
T Consensus 301 gS~D-----gTIkIWDl~tGk-------------~l~tL~gH~~~vvs~vafSPDG~~LaSGS----~D~TIklWd~ 355 (356)
T 2w18_A 301 ILTS-----GTIAIWDLLLGQ-------------CTALLPPVSDQHWSFVKWSGTDSHLLAGQ----KDGNIFVYHY 355 (356)
T ss_dssp EETT-----SCEEEEETTTCS-------------EEEEECCC--CCCCEEEECSSSSEEEEEC----TTSCEEEEEE
T ss_pred EcCC-----CcEEEEECCCCc-------------EEEEecCCCCCeEEEEEECCCCCEEEEEE----CCCcEEEecC
Confidence 4322 348999998853 2233332222222 35999999877432 2345666553
No 443
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=97.72 E-value=0.00046 Score=72.67 Aligned_cols=203 Identities=9% Similarity=-0.039 Sum_probs=113.7
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEec--CCcEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTE--DGQYL 314 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~Sp--DG~~l 314 (789)
...++|+|||+.|+-...+ ..|.+|++.++.......+.. +...+..++|+| +|++|
T Consensus 16 V~~v~~s~~g~~lasgs~D-------------------~~v~lwd~~~~~~~~~~~l~g--H~~~V~~v~~~~~~~~~~l 74 (316)
T 3bg1_A 16 IHDAQMDYYGTRLATCSSD-------------------RSVKIFDVRNGGQILIADLRG--HEGPVWQVAWAHPMYGNIL 74 (316)
T ss_dssp EEEEEECGGGCEEEEEETT-------------------TEEEEEEEETTEEEEEEEEEC--CSSCEEEEEECCGGGSSCE
T ss_pred EEEeeEcCCCCEEEEEeCC-------------------CeEEEEEecCCCcEEEEEEcC--CCccEEEEEeCCCCCCCEE
Confidence 5789999999998865433 358888876542211222333 334467889986 48877
Q ss_pred EEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccc-eeEEEecC--CCEEEEEECCCCCCceEEEEEC
Q 003878 315 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIAND--DTVFTFLTNKDAPKYKIIRVDL 391 (789)
Q Consensus 315 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~d--G~~l~~~tn~~~~~~~L~~~dl 391 (789)
+-.+.+ ..|.++|+.++. ......+...... .-..|+|+ |..|+.. . .+..|..+++
T Consensus 75 ~s~s~D-----~~v~iWd~~~~~-----------~~~~~~~~~h~~~V~~v~~~p~~~g~~lasg-s---~D~~i~lwd~ 134 (316)
T 3bg1_A 75 ASCSYD-----RKVIIWREENGT-----------WEKSHEHAGHDSSVNSVCWAPHDYGLILACG-S---SDGAISLLTY 134 (316)
T ss_dssp EEEETT-----SCEEEECCSSSC-----------CCEEEEECCCSSCCCEEEECCTTTCSCEEEE-C---SSSCEEEEEE
T ss_pred EEEECC-----CEEEEEECCCCc-----------ceEEEEccCCCCceEEEEECCCCCCcEEEEE-c---CCCCEEEEec
Confidence 755433 348888887642 0111112111111 12348887 5555432 2 2356777787
Q ss_pred CCCCCeEEecc-CCCCceeeeEEEecC-----------------CEEEEEEEeCCeEEEEEEECCCCc---eeeecccCC
Q 003878 392 KEPNDWFEVIP-EAERDVLESATAVNL-----------------NQMIVSYLSDVKYVLQIRDLKNGS---LLHQLPIEI 450 (789)
Q Consensus 392 ~~~~~~~~l~~-~~~~~~i~~v~~~~~-----------------~~lv~~~~~~g~~~L~~~dl~tG~---~~~~l~~~~ 450 (789)
.++..+..... ......+..+.++++ ..++++...++ .|++||+.++. ....+..+.
T Consensus 135 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~--~v~lWd~~~~~~~~~~~~l~~h~ 212 (316)
T 3bg1_A 135 TGEGQWEVKKINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDN--LIKLWKEEEDGQWKEEQKLEAHS 212 (316)
T ss_dssp CSSSCEEECCBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTTS--BCCEEEECTTSCEEEEECCBCCS
T ss_pred CCCCCcceeeeeccccCCcceEEEccccCCccccccccccCccccceEEEecCCC--eEEEEEeCCCCccceeeecccCC
Confidence 66532322111 111234556667663 14566666676 57788876442 223444445
Q ss_pred eeEEEeecccCC---cEEEEEEcCCCCCcEEEEEECCC
Q 003878 451 GSVNAISARRED---SVVFISFTSFLIPGIVYQCNLKT 485 (789)
Q Consensus 451 ~~v~~~s~s~d~---~~l~~~~ss~~~P~~ly~~dl~t 485 (789)
..|..+.++|++ ..++++.+ .-.++..|++.+
T Consensus 213 ~~V~~v~~sp~~~~~~~~las~s---~D~~v~iw~~~~ 247 (316)
T 3bg1_A 213 DWVRDVAWAPSIGLPTSTIASCS---QDGRVFIWTCDD 247 (316)
T ss_dssp SCEEEEECCCCSSCSCCEEEEEE---TTCEEEEEECSS
T ss_pred CceEEEEecCCCCCCCceEEEEc---CCCeEEEEEccC
Confidence 668888999886 23343433 245888888865
No 444
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=97.70 E-value=0.0056 Score=63.16 Aligned_cols=196 Identities=9% Similarity=0.043 Sum_probs=108.3
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
..++.++|||+.|+ + .. ..|+.++. ++ +.+--+..+. ...+.++.+++||+.++.
T Consensus 39 ~~~~~~~pdG~ilv-s-~~-------------------~~V~~~d~-~G--~~~W~~~~~~-~~~~~~~~~~~dG~~lv~ 93 (276)
T 3no2_A 39 CNSVAATKAGEILF-S-YS-------------------KGAKMITR-DG--RELWNIAAPA-GCEMQTARILPDGNALVA 93 (276)
T ss_dssp CCEEEECTTSCEEE-E-CB-------------------SEEEEECT-TS--CEEEEEECCT-TCEEEEEEECTTSCEEEE
T ss_pred CcCeEECCCCCEEE-e-CC-------------------CCEEEECC-CC--CEEEEEcCCC-CccccccEECCCCCEEEE
Confidence 36778899998665 3 11 23555555 32 2122222221 123557889999999876
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-c-----ccceeEEEecCCCEEEEEECCCCCCceEEEEE
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-G-----FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVD 390 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~-----~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~d 390 (789)
.... ...++.++.++ + ..+..... + .........++|+.++... .+.+|+.+|
T Consensus 94 ~~~~----~~~v~~vd~~G-k------------~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~----~~~~v~~~d 152 (276)
T 3no2_A 94 WCGH----PSTILEVNMKG-E------------VLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF----ATSEVREIA 152 (276)
T ss_dssp EEST----TEEEEEECTTS-C------------EEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET----TTTEEEEEC
T ss_pred ecCC----CCEEEEEeCCC-C------------EEEEEeccCCCCcccccccCceECCCCCEEEEec----CCCEEEEEC
Confidence 5421 35677777543 1 00111000 0 0011123577888765322 357899999
Q ss_pred CCCCC-CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeeccc---C---CeeEEEeecccCCc
Q 003878 391 LKEPN-DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI---E---IGSVNAISARREDS 463 (789)
Q Consensus 391 l~~~~-~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~---~---~~~v~~~s~s~d~~ 463 (789)
.+ ++ .|+.-.+.. ..++...+++.+++....++ +|+.+|+++|+.+.++.. + ...+.++...+++.
T Consensus 153 ~~-G~~~w~~~~~~~----~~~~~~~~~g~~~v~~~~~~--~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 153 PN-GQLLNSVKLSGT----PFSSAFLDNGDCLVACGDAH--CFVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG 225 (276)
T ss_dssp TT-SCEEEEEECSSC----CCEEEECTTSCEEEECBTTS--EEEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSC
T ss_pred CC-CCEEEEEECCCC----ccceeEcCCCCEEEEeCCCC--eEEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCC
Confidence 88 55 343222211 22344455567776665554 799999998987555532 1 12245666678888
Q ss_pred EEEEEEcCCC------CCcEEEEEECCCC
Q 003878 464 VVFISFTSFL------IPGIVYQCNLKTE 486 (789)
Q Consensus 464 ~l~~~~ss~~------~P~~ly~~dl~tg 486 (789)
.++..+.+.. ..+.++.++. +|
T Consensus 226 i~v~~~~g~~~~~~~~~~~~~~~~~~-~g 253 (276)
T 3no2_A 226 LYICNWQGHDREAGKGKHPQLVEIDS-EG 253 (276)
T ss_dssp EEEEEECTTCTTGGGSCCCSEEEECT-TS
T ss_pred EEEEeccCccccccccCCceEEEECC-CC
Confidence 7666664432 3667888875 55
No 445
>3tjm_A Fatty acid synthase; thioesterase domain, fatty acid synthesis, hydrolase-hydrola inhibitor complex; HET: 7FA; 1.48A {Homo sapiens} PDB: 1xkt_A
Probab=97.68 E-value=0.00019 Score=74.53 Aligned_cols=95 Identities=9% Similarity=-0.085 Sum_probs=60.3
Q ss_pred CCccEEEEEcCCCCccCCCCCCHHHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHHHHHcCCC
Q 003878 536 GSHPCLLYGYGGFNISVTPSFSVSRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEYLISAGYT 615 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~~~~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~L~~~~~~ 615 (789)
+..|.|+++||..+.. ..|.. +...| .+.|+.++.++. ....+++++.+.+..++..- .
T Consensus 22 ~~~~~l~~~hg~~~~~--~~~~~-~~~~L---~~~v~~~d~~~~--------------~~~~~~~~~a~~~~~~i~~~-~ 80 (283)
T 3tjm_A 22 SSERPLFLVHPIEGST--TVFHS-LASRL---SIPTYGLQCTRA--------------APLDSIHSLAAYYIDCIRQV-Q 80 (283)
T ss_dssp SSSCCEEEECCTTCCS--GGGHH-HHHHC---SSCEEEECCCTT--------------SCCSCHHHHHHHHHHHHTTT-C
T ss_pred CCCCeEEEECCCCCCH--HHHHH-HHHhc---CceEEEEecCCC--------------CCCCCHHHHHHHHHHHHHHh-C
Confidence 4457788999987643 23332 23333 388889998541 12335566655544444431 1
Q ss_pred CCCcEEEEeeChHHHHHHHHHHhC---CCcee---EEEecCC
Q 003878 616 QSRKLCIEGGSNGGLLVGACINQR---PDLFG---CALAHVG 651 (789)
Q Consensus 616 d~~~i~i~G~S~GG~l~~~~~~~~---pd~f~---a~v~~~p 651 (789)
...++.++|||+||.++..++.+. |+... .+|+..+
T Consensus 81 ~~~~~~l~GhS~Gg~va~~~a~~~~~~~~~v~~~~~lvlid~ 122 (283)
T 3tjm_A 81 PEGPYRVAGYSYGACVAFEMCSQLQAQQSPAPTHNSLFLFDG 122 (283)
T ss_dssp CSSCCEEEEETHHHHHHHHHHHHHHHHHTTSCCCCEEEEESC
T ss_pred CCCCEEEEEECHhHHHHHHHHHHHHHcCCCCCccceEEEEcC
Confidence 226899999999999999988755 77777 6665543
No 446
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.68 E-value=0.025 Score=58.99 Aligned_cols=97 Identities=6% Similarity=-0.040 Sum_probs=59.2
Q ss_pred EecCCCEEEEEECCCCCCceEEEEECCC-CC--CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCce
Q 003878 366 IANDDTVFTFLTNKDAPKYKIIRVDLKE-PN--DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 366 ~s~dG~~l~~~tn~~~~~~~L~~~dl~~-~~--~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~ 442 (789)
+++||+.||+... .+.+|++++++. +. ..+.+ ... ....++++.+++.+++....+ .+|.+++.+ |+.
T Consensus 174 is~dg~~lyv~d~---~~~~I~~~~~~~~g~~~~~~~~-~~~--~~P~gi~vd~dG~l~va~~~~--~~V~~~~~~-G~~ 244 (306)
T 2p4o_A 174 LKRFGNFLYVSNT---EKMLLLRIPVDSTDKPGEPEIF-VEQ--TNIDDFAFDVEGNLYGATHIY--NSVVRIAPD-RST 244 (306)
T ss_dssp EEEETTEEEEEET---TTTEEEEEEBCTTSCBCCCEEE-EES--CCCSSEEEBTTCCEEEECBTT--CCEEEECTT-CCE
T ss_pred cCcCCCEEEEEeC---CCCEEEEEEeCCCCCCCccEEE-ecc--CCCCCeEECCCCCEEEEeCCC--CeEEEECCC-CCE
Confidence 4889998887543 346899999875 32 11222 111 123567888767777655444 378899986 765
Q ss_pred ee--ecccCCeeEEEeecc---cCCcEEEEEEcC
Q 003878 443 LH--QLPIEIGSVNAISAR---REDSVVFISFTS 471 (789)
Q Consensus 443 ~~--~l~~~~~~v~~~s~s---~d~~~l~~~~ss 471 (789)
.. .+..+......+.+. ++++.|+++...
T Consensus 245 ~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 245 TIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp EEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred EEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 22 344342334466666 788888887643
No 447
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.68 E-value=0.019 Score=58.85 Aligned_cols=153 Identities=11% Similarity=0.081 Sum_probs=86.3
Q ss_pred EEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee--cccc-ceeEEEecCCCEEEEEEC
Q 003878 302 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI--DGFD-AQYEVIANDDTVFTFLTN 378 (789)
Q Consensus 302 ~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~--~~~~-~~~~~~s~dG~~l~~~tn 378 (789)
..+++++|||+ +++... . ...|++++.++. ...... .... .....++++|+ +|+...
T Consensus 123 ~~~i~~~~~g~-l~v~~~-~---~~~i~~~~~~g~--------------~~~~~~~~~~~~~p~~i~~~~~g~-l~v~~~ 182 (286)
T 1q7f_A 123 PRGVTVDNKGR-IIVVEC-K---VMRVIIFDQNGN--------------VLHKFGCSKHLEFPNGVVVNDKQE-IFISDN 182 (286)
T ss_dssp EEEEEECTTSC-EEEEET-T---TTEEEEECTTSC--------------EEEEEECTTTCSSEEEEEECSSSE-EEEEEG
T ss_pred ceEEEEeCCCC-EEEEEC-C---CCEEEEEcCCCC--------------EEEEeCCCCccCCcEEEEECCCCC-EEEEEC
Confidence 45788999997 444332 1 356888886531 011111 1111 11234677775 665433
Q ss_pred CCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC--CeeEEEe
Q 003878 379 KDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAI 456 (789)
Q Consensus 379 ~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~--~~~v~~~ 456 (789)
.+..|.+++.++.. ...+..........++++++++.+++....++ ..|.+|+.+ |+.+..+..+ ......+
T Consensus 183 ---~~~~i~~~~~~g~~-~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~-~~i~~~~~~-g~~~~~~~~~~~~~~~~~i 256 (286)
T 1q7f_A 183 ---RAHCVKVFNYEGQY-LRQIGGEGITNYPIGVGINSNGEILIADNHNN-FNLTIFTQD-GQLISALESKVKHAQCFDV 256 (286)
T ss_dssp ---GGTEEEEEETTCCE-EEEESCTTTSCSEEEEEECTTCCEEEEECSSS-CEEEEECTT-SCEEEEEEESSCCSCEEEE
T ss_pred ---CCCEEEEEcCCCCE-EEEEccCCccCCCcEEEECCCCCEEEEeCCCC-EEEEEECCC-CCEEEEEcccCCCCcceeE
Confidence 24689999975532 33332222123456788887677777654432 278999976 6654555433 2234567
Q ss_pred ecccCCcEEEEEEcCCCCCcEEEEEECCC
Q 003878 457 SARREDSVVFISFTSFLIPGIVYQCNLKT 485 (789)
Q Consensus 457 s~s~d~~~l~~~~ss~~~P~~ly~~dl~t 485 (789)
.+++++. ++++ + . -.++..|+...
T Consensus 257 ~~~~~g~-l~vs-~-~--~~~v~v~~~~~ 280 (286)
T 1q7f_A 257 ALMDDGS-VVLA-S-K--DYRLYIYRYVQ 280 (286)
T ss_dssp EEETTTE-EEEE-E-T--TTEEEEEECSC
T ss_pred EECCCCc-EEEE-C-C--CCeEEEEEccc
Confidence 7788875 6665 3 2 36777777643
No 448
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.68 E-value=0.018 Score=62.51 Aligned_cols=162 Identities=7% Similarity=-0.053 Sum_probs=97.8
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.++++.+.++.||++-. ...+|++.++.... ...+.... -..-.+++++|++.+|+++
T Consensus 162 ~glavd~~~g~lY~~d~------------------~~~~I~~~~~dg~~--~~~l~~~~--l~~P~giavdp~~g~ly~t 219 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDS------------------GTSRIEVANLDGAH--RKVLLWQS--LEKPRAIALHPMEGTIYWT 219 (386)
T ss_dssp CCEEEETTTTEEEEEET------------------TTTEEEECBTTSCS--CEEEECSS--CSCEEEEEEETTTTEEEEE
T ss_pred cEEEEEeCCCeEEEEcC------------------CCCeEEEEeCCCCc--eEEeecCC--CCCCcEEEEEcCCCeEEEe
Confidence 56888888889988732 22467777775432 22333221 1123478899999998876
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-ccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
.... ...|+.+++++.. ...+.. +.. ..-..++++++.||+.-. ...+|.++++++..
T Consensus 220 d~~~---~~~I~r~~~dG~~--------------~~~~~~~~~~~PnGlavd~~~~~lY~aD~---~~~~I~~~d~dG~~ 279 (386)
T 3v65_B 220 DWGN---TPRIEASSMDGSG--------------RRIIADTHLFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGSH 279 (386)
T ss_dssp ECSS---SCEEEEEETTSCS--------------CEEEECSSCSCEEEEEEEGGGTEEEEEET---TTTEEEEECTTSCS
T ss_pred ccCC---CCEEEEEeCCCCC--------------cEEEEECCCCCeeeEEEeCCCCEEEEEEC---CCCEEEEEeCCCCe
Confidence 5321 3679999987631 122221 221 112347888899998643 45789999998754
Q ss_pred CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeec
Q 003878 396 DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL 446 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l 446 (789)
.+.++... ...-.++++.. +.+|++-..+ .+|.+++..+|+..+.|
T Consensus 280 -~~~~~~~~-~~~P~giav~~-~~ly~td~~~--~~V~~~~~~~G~~~~~i 325 (386)
T 3v65_B 280 -RKAVISQG-LPHPFAITVFE-DSLYWTDWHT--KSINSANKFTGKNQEII 325 (386)
T ss_dssp -CEEEECSS-CSSEEEEEEET-TEEEEEETTT--TEEEEEETTTCCSCEEE
T ss_pred -eEEEEECC-CCCceEEEEEC-CEEEEeeCCC--CeEEEEECCCCcceEEE
Confidence 34454433 23346777765 7888765433 47888886557654444
No 449
>2hih_A Lipase 46 kDa form; A1 phospholipase, phospholipid binding, hydrolase; 2.86A {Staphylococcus hyicus}
Probab=97.62 E-value=0.00018 Score=79.10 Aligned_cols=115 Identities=11% Similarity=0.043 Sum_probs=64.8
Q ss_pred CCccEEEEEcCCCCcc------CCCCCCH---HHHHHHHcCCeEEEEEeecCCCCCChhHH------hcccccCCc----
Q 003878 536 GSHPCLLYGYGGFNIS------VTPSFSV---SRTILMRHLGAVFCIANIRGGGEYGEEWH------KGGALAKKQ---- 596 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~------~~~~~~~---~~~~~l~~~G~~v~~~~~RG~g~~g~~~~------~~~~~~~~~---- 596 (789)
+..|.||++||..+.. ....|.. .+...|.++||.|+++|++|.|.....-. ..+....+.
T Consensus 50 ~~~~pVVLvHG~~g~~~~~~~~~~~~W~~~~~~l~~~L~~~Gy~Via~Dl~G~G~S~~~~~~l~~~i~~g~g~sg~~~~~ 129 (431)
T 2hih_A 50 KNKDPFVFVHGFTGFVGEVAAKGENYWGGTKANLRNHLRKAGYETYEASVSALASNHERAVELYYYLKGGRVDYGAAHSE 129 (431)
T ss_dssp SCSSCEEEECCTTCCCGGGSCTTCCTTTTTTCCHHHHHHHTTCCEEEECCCSSSCHHHHHHHHHHHHHCEEEECCHHHHH
T ss_pred CCCCeEEEECCCCCCcccccccchhhhhccHHHHHHHHHhCCCEEEEEcCCCCCCCccchHHhhhhhhhccccccccccc
Confidence 4456789999987642 1234431 24455655899999999999764211000 000000000
Q ss_pred -chHHHHHHHHHHHHHcCCCC-CCcEEEEeeChHHHHHHHHHHh--------------------------CCCceeEEEe
Q 003878 597 -NCFDDFISASEYLISAGYTQ-SRKLCIEGGSNGGLLVGACINQ--------------------------RPDLFGCALA 648 (789)
Q Consensus 597 -~~~~D~~~~~~~L~~~~~~d-~~~i~i~G~S~GG~l~~~~~~~--------------------------~pd~f~a~v~ 648 (789)
..++++.+.+..+++. .. ..++.++|||+||+++..++.. +|++++.+|+
T Consensus 130 ~~~~~~~a~dl~~ll~~--l~~~~kv~LVGHSmGG~iA~~lA~~l~~~~~~~~~~~~~~gg~i~~l~~g~~p~~V~slv~ 207 (431)
T 2hih_A 130 KYGHERYGKTYEGVLKD--WKPGHPVHFIGHSMGGQTIRLLEHYLRFGDKAEIAYQQQHGGIISELFKGGQDNMVTSITT 207 (431)
T ss_dssp HHTCCSEEEEECCSCTT--CBTTBCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHCSCCCHHHHCCCCSCEEEEEE
T ss_pred cCCHHHHHHHHHHHHHH--hCCCCCEEEEEEChhHHHHHHHHHHhccccccchhhccccccccccccccCcccceeEEEE
Confidence 0000000000011111 12 2689999999999999988765 6899999988
Q ss_pred cCCc
Q 003878 649 HVGV 652 (789)
Q Consensus 649 ~~p~ 652 (789)
..+.
T Consensus 208 i~tP 211 (431)
T 2hih_A 208 IATP 211 (431)
T ss_dssp ESCC
T ss_pred ECCC
Confidence 7653
No 450
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.60 E-value=0.049 Score=58.12 Aligned_cols=198 Identities=11% Similarity=0.016 Sum_probs=116.0
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++|.+++..||++-. ...+|+++++.+...+ .++......+ .++++.+.++.|++.
T Consensus 76 ~~l~~d~~~~~ly~~D~------------------~~~~I~r~~~~g~~~~-~~~~~~~~~p---~glavd~~~g~ly~~ 133 (349)
T 3v64_C 76 IALDFHHRRELVFWSDV------------------TLDRILRANLNGSNVE-EVVSTGLESP---GGLAVDWVHDKLYWT 133 (349)
T ss_dssp EEEEEETTTTEEEEEET------------------TTTEEEEEETTSCSCE-EEECSSCSCC---CEEEEETTTTEEEEE
T ss_pred EEEEEeccccEEEEEec------------------cCCceEEEecCCCCce-EEEeCCCCCc---cEEEEecCCCeEEEE
Confidence 67899998899998732 2346888888764322 2222221222 367888888888776
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-cccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
... ...|+++++++.. ...+. .+.. ..-..+.|.++.||+..... ..+|+++++++..
T Consensus 134 d~~----~~~I~~~~~dG~~--------------~~~l~~~~l~~P~~iavdp~~g~ly~td~~~--~~~I~r~~~dG~~ 193 (349)
T 3v64_C 134 DSG----TSRIEVANLDGAH--------------RKVLLWQSLEKPRAIALHPMEGTIYWTDWGN--TPRIEASSMDGSG 193 (349)
T ss_dssp ETT----TTEEEEEETTSCS--------------CEEEECTTCSCEEEEEEETTTTEEEEEECSS--SCEEEEEETTSCS
T ss_pred cCC----CCeEEEEcCCCCc--------------eEEEEeCCCCCcceEEEecCcCeEEEeccCC--CCEEEEEeCCCCC
Confidence 432 3579999987631 11222 1211 11224678788888765332 4789999998754
Q ss_pred CeEEeccCCCCceeeeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceeeec-ccCCeeEEEeecccCCcEEEEEEcCCC
Q 003878 396 DWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQL-PIEIGSVNAISARREDSVVFISFTSFL 473 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l-~~~~~~v~~~s~s~d~~~l~~~~ss~~ 473 (789)
.+.++... -..-.++++++ ++.||++-... .+|++++++ |...+.+ ........+++. +++.++++- .
T Consensus 194 -~~~~~~~~-~~~PnGla~d~~~~~lY~aD~~~--~~I~~~~~d-G~~~~~~~~~~~~~P~giav--~~~~ly~td---~ 263 (349)
T 3v64_C 194 -RRIIADTH-LFWPNGLTIDYAGRRMYWVDAKH--HVIERANLD-GSHRKAVISQGLPHPFAITV--FEDSLYWTD---W 263 (349)
T ss_dssp -CEESCCSS-CSCEEEEEEETTTTEEEEEETTT--TEEEEEETT-SCSCEEEECSSCSSEEEEEE--ETTEEEEEE---T
T ss_pred -cEEEEECC-CCCcceEEEeCCCCEEEEEECCC--CEEEEEeCC-CCceEEEEeCCCCCceEEEE--ECCEEEEec---C
Confidence 34444432 23346788885 46777764433 489999997 5432332 222222334444 345666642 2
Q ss_pred CCcEEEEEECCCCC
Q 003878 474 IPGIVYQCNLKTET 487 (789)
Q Consensus 474 ~P~~ly~~dl~tg~ 487 (789)
.-..|.+++..+|+
T Consensus 264 ~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 264 HTKSINSANKFTGK 277 (349)
T ss_dssp TTTEEEEEETTTCC
T ss_pred CCCeEEEEEccCCC
Confidence 34578888865664
No 451
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.59 E-value=0.0082 Score=60.89 Aligned_cols=191 Identities=8% Similarity=0.005 Sum_probs=118.3
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.++.++ ++.||.+... ..+|.+.++.++.....+ .. . ..+ +...+++|+.|+..
T Consensus 58 qGL~~~--~~~Ly~stG~------------------~g~v~~iD~~Tgkv~~~~-l~--~-~~F--geGit~~g~~Ly~l 111 (268)
T 3nok_A 58 QGLVFH--QGHFFESTGH------------------QGTLRQLSLESAQPVWME-RL--G-NIF--AEGLASDGERLYQL 111 (268)
T ss_dssp EEEEEE--TTEEEEEETT------------------TTEEEECCSSCSSCSEEE-EC--T-TCC--EEEEEECSSCEEEE
T ss_pred ceEEEE--CCEEEEEcCC------------------CCEEEEEECCCCcEEeEE-CC--C-Ccc--eeEEEEeCCEEEEE
Confidence 577875 5788877432 223888888877655544 22 2 222 34457788888776
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCe
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW 397 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~ 397 (789)
... .+.++++|.++++ ....+... ...+. .++||++||+ ++ + ..+|..+|.++.+..
T Consensus 112 tw~----~~~v~V~D~~Tl~-------------~~~ti~~~-~eGwG-Lt~Dg~~L~v-Sd--G-s~~l~~iDp~T~~v~ 168 (268)
T 3nok_A 112 TWT----EGLLFTWSGMPPQ-------------RERTTRYS-GEGWG-LCYWNGKLVR-SD--G-GTMLTFHEPDGFALV 168 (268)
T ss_dssp ESS----SCEEEEEETTTTE-------------EEEEEECS-SCCCC-EEEETTEEEE-EC--S-SSEEEEECTTTCCEE
T ss_pred Ecc----CCEEEEEECCcCc-------------EEEEEeCC-CceeE-EecCCCEEEE-EC--C-CCEEEEEcCCCCeEE
Confidence 532 4779999998842 11122111 11222 4578988876 44 2 468999999887632
Q ss_pred EEecc-CC--CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-------------CeeEEEeecccC
Q 003878 398 FEVIP-EA--ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-------------IGSVNAISARRE 461 (789)
Q Consensus 398 ~~l~~-~~--~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~-------------~~~v~~~s~s~d 461 (789)
..+.- .. +-..+..+.+.+ +.+++..... ..|.++|+++|+.+..|.+. .....+++++++
T Consensus 169 ~~I~V~~~g~~v~~lNeLe~~d-G~lyanvw~s--~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~ 245 (268)
T 3nok_A 169 GAVQVKLRGQPVELINELECAN-GVIYANIWHS--SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPG 245 (268)
T ss_dssp EEEECEETTEECCCEEEEEEET-TEEEEEETTC--SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTT
T ss_pred EEEEeCCCCcccccccccEEeC-CEEEEEECCC--CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCC
Confidence 22221 11 112455677776 7877655332 48999999999987776542 124578899999
Q ss_pred CcEEEEEEcCCCCCcEEEEEEC
Q 003878 462 DSVVFISFTSFLIPGIVYQCNL 483 (789)
Q Consensus 462 ~~~l~~~~ss~~~P~~ly~~dl 483 (789)
+++++++---| +.+|++.+
T Consensus 246 ~~rlfVTGK~W---p~~~ev~~ 264 (268)
T 3nok_A 246 SGRIFMTGKLW---PRLFEVRL 264 (268)
T ss_dssp TCCEEEEETTC---SEEEEEEE
T ss_pred CCEEEEeCCCC---CceEEEEE
Confidence 99888876544 66666543
No 452
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.57 E-value=0.03 Score=60.66 Aligned_cols=199 Identities=11% Similarity=-0.005 Sum_probs=115.9
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
..+++|.+++..||++-. ...+|+++++.+...+ .++......+ .++++.+.++.|++
T Consensus 118 ~~gl~~d~~~~~ly~~D~------------------~~~~I~r~~~~g~~~~-~~~~~~~~~p---~glavd~~~g~lY~ 175 (386)
T 3v65_B 118 AIALDFHHRRELVFWSDV------------------TLDRILRANLNGSNVE-EVVSTGLESP---GGLAVDWVHDKLYW 175 (386)
T ss_dssp EEEEEEETTTTEEEEEET------------------TTTEEEEEETTSCCEE-EEECSSCSCC---CCEEEETTTTEEEE
T ss_pred cEEEEEecCCCeEEEEeC------------------CCCcEEEEecCCCCcE-EEEeCCCCCc---cEEEEEeCCCeEEE
Confidence 367999998889988732 2346888888654322 2221111122 25778888888877
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-cccc-eeEEEecCCCEEEEEECCCCCCceEEEEECCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 394 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~ 394 (789)
.... ...|+++++++.. ...+.. +... .-..+.|.+..||+.... ...+|+++++++.
T Consensus 176 ~d~~----~~~I~~~~~dg~~--------------~~~l~~~~l~~P~giavdp~~g~ly~td~~--~~~~I~r~~~dG~ 235 (386)
T 3v65_B 176 TDSG----TSRIEVANLDGAH--------------RKVLLWQSLEKPRAIALHPMEGTIYWTDWG--NTPRIEASSMDGS 235 (386)
T ss_dssp EETT----TTEEEECBTTSCS--------------CEEEECSSCSCEEEEEEETTTTEEEEEECS--SSCEEEEEETTSC
T ss_pred EcCC----CCeEEEEeCCCCc--------------eEEeecCCCCCCcEEEEEcCCCeEEEeccC--CCCEEEEEeCCCC
Confidence 6432 3578888887531 112221 2111 122467778888876432 2478999999876
Q ss_pred CCeEEeccCCCCceeeeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceeeec-ccCCeeEEEeecccCCcEEEEEEcCC
Q 003878 395 NDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQL-PIEIGSVNAISARREDSVVFISFTSF 472 (789)
Q Consensus 395 ~~~~~l~~~~~~~~i~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l-~~~~~~v~~~s~s~d~~~l~~~~ss~ 472 (789)
. .+.++... -..-.++++++ ++.||++-... .+|++++++ |...+.+ ........+++. +++.++++-
T Consensus 236 ~-~~~~~~~~-~~~PnGlavd~~~~~lY~aD~~~--~~I~~~d~d-G~~~~~~~~~~~~~P~giav--~~~~ly~td--- 305 (386)
T 3v65_B 236 G-RRIIADTH-LFWPNGLTIDYAGRRMYWVDAKH--HVIERANLD-GSHRKAVISQGLPHPFAITV--FEDSLYWTD--- 305 (386)
T ss_dssp S-CEEEECSS-CSCEEEEEEEGGGTEEEEEETTT--TEEEEECTT-SCSCEEEECSSCSSEEEEEE--ETTEEEEEE---
T ss_pred C-cEEEEECC-CCCeeeEEEeCCCCEEEEEECCC--CEEEEEeCC-CCeeEEEEECCCCCceEEEE--ECCEEEEee---
Confidence 4 34444333 23346788874 46787764433 489999997 4432333 222222334444 345666653
Q ss_pred CCCcEEEEEECCCCC
Q 003878 473 LIPGIVYQCNLKTET 487 (789)
Q Consensus 473 ~~P~~ly~~dl~tg~ 487 (789)
..-..|.++|..+|+
T Consensus 306 ~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 306 WHTKSINSANKFTGK 320 (386)
T ss_dssp TTTTEEEEEETTTCC
T ss_pred CCCCeEEEEECCCCc
Confidence 244688888866664
No 453
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.56 E-value=0.05 Score=55.48 Aligned_cols=193 Identities=11% Similarity=0.039 Sum_probs=104.8
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
..++++++||+ |+++.. ....|++++... ....+..+.......++.+++||+. ++
T Consensus 59 ~~~i~~~~~g~-l~v~~~------------------~~~~i~~~~~~g----~~~~~~~~~~~~~~~~i~~~~~g~l-~v 114 (299)
T 2z2n_A 59 VMCLTISSDGE-VWFTEN------------------AANKIGRITKKG----IIKEYTLPNPDSAPYGITEGPNGDI-WF 114 (299)
T ss_dssp EEEEEECTTSC-EEEEET------------------TTTEEEEECTTS----CEEEEECSSTTCCEEEEEECTTSCE-EE
T ss_pred eeeEEECCCCC-EEEeCC------------------CCCeEEEECCCC----cEEEEeCCCcCCCceeeEECCCCCE-EE
Confidence 35678888886 555432 123467666531 1222332212223457888999864 33
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
.... ...|++++. ++. ........... .....++++| .+|+.... ...|++++. +++
T Consensus 115 ~~~~----~~~i~~~d~-~g~------------~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~---~~~i~~~~~-~g~ 172 (299)
T 2z2n_A 115 TEMN----GNRIGRITD-DGK------------IREYELPNKGSYPSFITLGSDN-ALWFTENQ---NNAIGRITE-SGD 172 (299)
T ss_dssp EETT----TTEEEEECT-TCC------------EEEEECSSTTCCEEEEEECTTS-CEEEEETT---TTEEEEECT-TCC
T ss_pred EecC----CceEEEECC-CCC------------EEEecCCCCCCCCceEEEcCCC-CEEEEeCC---CCEEEEEcC-CCc
Confidence 3321 356888887 321 00001111111 1122366777 46655432 367999998 554
Q ss_pred CeEEe-ccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC--CeeEEEeecccCCcEEEEEEcCC
Q 003878 396 DWFEV-IPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSF 472 (789)
Q Consensus 396 ~~~~l-~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~--~~~v~~~s~s~d~~~l~~~~ss~ 472 (789)
...+ .+.. .....++.+.+++.+++....++ .|++++. +|+. ..+..+ ...+..+..++++. ++++..
T Consensus 173 -~~~~~~~~~-~~~~~~i~~~~~g~l~v~~~~~~--~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~~~-- 243 (299)
T 2z2n_A 173 -ITEFKIPTP-ASGPVGITKGNDDALWFVEIIGN--KIGRITT-SGEI-TEFKIPTPNARPHAITAGAGID-LWFTEW-- 243 (299)
T ss_dssp -EEEEECSST-TCCEEEEEECTTSSEEEEETTTT--EEEEECT-TCCE-EEEECSSTTCCEEEEEECSTTC-EEEEET--
T ss_pred -EEEeeCCCC-CCcceeEEECCCCCEEEEccCCc--eEEEECC-CCcE-EEEECCCCCCCceeEEECCCCC-EEEecc--
Confidence 3433 2322 23456788877667776554333 7899999 5765 333332 34456777788876 666532
Q ss_pred CCCcEEEEEECCCC
Q 003878 473 LIPGIVYQCNLKTE 486 (789)
Q Consensus 473 ~~P~~ly~~dl~tg 486 (789)
....++++|. ++
T Consensus 244 -~~~~i~~~d~-~g 255 (299)
T 2z2n_A 244 -GANKIGRLTS-NN 255 (299)
T ss_dssp -TTTEEEEEET-TT
T ss_pred -CCceEEEECC-CC
Confidence 3568999998 45
No 454
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.54 E-value=0.047 Score=58.26 Aligned_cols=162 Identities=7% Similarity=-0.053 Sum_probs=98.0
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++..+.++.||++.. ....|++.++.... ...+.... -..-.+++++|++.+|+++
T Consensus 119 ~glavd~~~g~ly~~d~------------------~~~~I~~~~~dG~~--~~~l~~~~--l~~P~~iavdp~~g~ly~t 176 (349)
T 3v64_C 119 GGLAVDWVHDKLYWTDS------------------GTSRIEVANLDGAH--RKVLLWQS--LEKPRAIALHPMEGTIYWT 176 (349)
T ss_dssp CEEEEETTTTEEEEEET------------------TTTEEEEEETTSCS--CEEEECTT--CSCEEEEEEETTTTEEEEE
T ss_pred cEEEEecCCCeEEEEcC------------------CCCeEEEEcCCCCc--eEEEEeCC--CCCcceEEEecCcCeEEEe
Confidence 56888888889988732 23468888876543 22333221 1123478899999998877
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-ccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
.... ...|+.+++++.. ...+.. +.. ..-..++++++.||+.-. ...+|.++++++..
T Consensus 177 d~~~---~~~I~r~~~dG~~--------------~~~~~~~~~~~PnGla~d~~~~~lY~aD~---~~~~I~~~~~dG~~ 236 (349)
T 3v64_C 177 DWGN---TPRIEASSMDGSG--------------RRIIADTHLFWPNGLTIDYAGRRMYWVDA---KHHVIERANLDGSH 236 (349)
T ss_dssp ECSS---SCEEEEEETTSCS--------------CEESCCSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS
T ss_pred ccCC---CCEEEEEeCCCCC--------------cEEEEECCCCCcceEEEeCCCCEEEEEEC---CCCEEEEEeCCCCc
Confidence 5321 3679999987631 111211 111 112347888899998643 34789999998754
Q ss_pred CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeec
Q 003878 396 DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL 446 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l 446 (789)
.+.++... ...-.++++.. +.+|++-..+ .+|.+++..+|+..+.+
T Consensus 237 -~~~~~~~~-~~~P~giav~~-~~ly~td~~~--~~V~~~~~~~G~~~~~i 282 (349)
T 3v64_C 237 -RKAVISQG-LPHPFAITVFE-DSLYWTDWHT--KSINSANKFTGKNQEII 282 (349)
T ss_dssp -CEEEECSS-CSSEEEEEEET-TEEEEEETTT--TEEEEEETTTCCSCEEE
T ss_pred -eEEEEeCC-CCCceEEEEEC-CEEEEecCCC--CeEEEEEccCCCccEEe
Confidence 34444433 23345777765 7887765444 37888886557654444
No 455
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.53 E-value=0.088 Score=55.19 Aligned_cols=200 Identities=12% Similarity=0.022 Sum_probs=113.8
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCC--CCcEEEEecC-CCCeeEEEEEEecCCcE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ--SEDILCWKDP-EHPKYIFSGHVTEDGQY 313 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~--~~~~~~~~~~-~~~~~~~~~~~SpDG~~ 313 (789)
..+++|.++++.||++-. ...+|++.++.+.. .....+.... ..+ .++++++.++.
T Consensus 32 p~g~~~d~~~~~ly~~D~------------------~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p---~glavd~~~~~ 90 (316)
T 1ijq_A 32 VVALDTEVASNRIYWSDL------------------SQRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSN 90 (316)
T ss_dssp EEEEEEETTTTEEEEEET------------------TTTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTE
T ss_pred eEEEEEEeCCCEEEEEEC------------------CCCcEEEEECCCCCCCcccEEEEeCCCCCc---CEEEEeecCCe
Confidence 368999999889998732 23468888876510 1122233211 222 35778888888
Q ss_pred EEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-ccc-ceeEEEecCCCEEEEEECCCCCCceEEEEEC
Q 003878 314 LVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDL 391 (789)
Q Consensus 314 l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl 391 (789)
|++.... ...|.++++++.. ...+.. ... ..-..+.|.++.+|+.... ...+|+++++
T Consensus 91 ly~~d~~----~~~I~~~~~~g~~--------------~~~~~~~~~~~P~~iavdp~~g~ly~~d~~--~~~~I~~~~~ 150 (316)
T 1ijq_A 91 IYWTDSV----LGTVSVADTKGVK--------------RKTLFRENGSKPRAIVVDPVHGFMYWTDWG--TPAKIKKGGL 150 (316)
T ss_dssp EEEEETT----TTEEEEEETTSSS--------------EEEEEECTTCCEEEEEEETTTTEEEEEECS--SSCEEEEEET
T ss_pred EEEEECC----CCEEEEEeCCCCc--------------eEEEEECCCCCcceEEeCCCCCEEEEEccC--CCCeEEEEcC
Confidence 8776422 4678899987521 112222 111 1122367778888876432 2478999999
Q ss_pred CCCCCeEEeccCCCCceeeeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceeeec-ccC--CeeEEEeecccCCcEEEE
Q 003878 392 KEPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQL-PIE--IGSVNAISARREDSVVFI 467 (789)
Q Consensus 392 ~~~~~~~~l~~~~~~~~i~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l-~~~--~~~v~~~s~s~d~~~l~~ 467 (789)
++.. .+.++... -..-.++++++ ++.||+.-... .+|++++++ |...+.+ ..+ .....+++. +++.+++
T Consensus 151 dG~~-~~~~~~~~-~~~P~gla~d~~~~~lY~~D~~~--~~I~~~d~d-g~~~~~~~~~~~~~~~P~giav--~~~~ly~ 223 (316)
T 1ijq_A 151 NGVD-IYSLVTEN-IQWPNGITLDLLSGRLYWVDSKL--HSISSIDVN-GGNRKTILEDEKRLAHPFSLAV--FEDKVFW 223 (316)
T ss_dssp TSCC-EEEEECSS-CSCEEEEEEETTTTEEEEEETTT--TEEEEEETT-SCSCEEEEECTTTTSSEEEEEE--ETTEEEE
T ss_pred CCCC-eEEEEECC-CCCceEEEEeccCCEEEEEECCC--CeEEEEecC-CCceEEEeecCCccCCcEEEEE--ECCEEEE
Confidence 7654 33444332 23456788885 36777655433 489999998 5432333 211 122234444 3456766
Q ss_pred EEcCCCCCcEEEEEECCCCC
Q 003878 468 SFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 468 ~~ss~~~P~~ly~~dl~tg~ 487 (789)
+- ..-.+|++++..+|+
T Consensus 224 ~d---~~~~~V~~~~~~~g~ 240 (316)
T 1ijq_A 224 TD---IINEAIFSANRLTGS 240 (316)
T ss_dssp EE---TTTTEEEEEETTTCC
T ss_pred EE---CCCCeEEEEeCCCCc
Confidence 43 234688999877665
No 456
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=97.52 E-value=0.0065 Score=63.37 Aligned_cols=194 Identities=12% Similarity=0.114 Sum_probs=107.6
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++|+|||+.|+++.. ....|++++.. +. ..++..+. ....++.+++||+.+ +.
T Consensus 48 egp~~~~~g~~l~~~d~------------------~~~~i~~~~~~-g~---~~~~~~~~--~~~~gl~~d~dG~l~-v~ 102 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDL------------------VGRRVLGWRED-GT---VDVLLDAT--AFTNGNAVDAQQRLV-HC 102 (305)
T ss_dssp EEEEEEGGGTEEEEEET------------------TTTEEEEEETT-SC---EEEEEESC--SCEEEEEECTTSCEE-EE
T ss_pred cCCeEeCCCCEEEEEEC------------------CCCEEEEEeCC-CC---EEEEeCCC--CccceeeECCCCCEE-EE
Confidence 68999999999998843 23458888763 22 23333332 234578999999844 33
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc------ceeEEEecCCCEEEEEE-----CC-------
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD------AQYEVIANDDTVFTFLT-----NK------- 379 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~s~dG~~l~~~t-----n~------- 379 (789)
.. . ...|++++.+ +. ...+..... .....++++|+ +|+.. ..
T Consensus 103 ~~-~---~~~v~~~~~~-g~--------------~~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~ 162 (305)
T 3dr2_A 103 EH-G---RRAITRSDAD-GQ--------------AHLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPA 162 (305)
T ss_dssp ET-T---TTEEEEECTT-SC--------------EEEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCC
T ss_pred EC-C---CCEEEEECCC-CC--------------EEEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCcccccccccc
Confidence 21 1 2468888875 22 111111100 11234788886 55421 00
Q ss_pred --CCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCE-EEEEEEeC---CeEEEEEEECCCCce--eeec-ccCC
Q 003878 380 --DAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQ-MIVSYLSD---VKYVLQIRDLKNGSL--LHQL-PIEI 450 (789)
Q Consensus 380 --~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~-lv~~~~~~---g~~~L~~~dl~tG~~--~~~l-~~~~ 450 (789)
......|++++.++++ ++.+. . .....++++++++. |++..... +...|++++++++.. .+.+ ..+.
T Consensus 163 ~~~~~~~~v~~~d~~~g~-~~~~~-~--~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~ 238 (305)
T 3dr2_A 163 DPELAHHSVYRLPPDGSP-LQRMA-D--LDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPD 238 (305)
T ss_dssp CCSSSCEEEEEECSSSCC-CEEEE-E--ESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSS
T ss_pred ccccCCCeEEEEcCCCCc-EEEEe-c--CCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCC
Confidence 1124689999987765 45444 2 23346788888654 65554431 124799998864331 0111 1122
Q ss_pred eeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCC
Q 003878 451 GSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTE 486 (789)
Q Consensus 451 ~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg 486 (789)
+...++..+++++ ++++. ...|++|+.+..
T Consensus 239 ~~pdgi~~d~~G~-lwv~~-----~~gv~~~~~~g~ 268 (305)
T 3dr2_A 239 GLPDGFCVDRGGW-LWSSS-----GTGVCVFDSDGQ 268 (305)
T ss_dssp SCCCSEEECTTSC-EEECC-----SSEEEEECTTSC
T ss_pred CCCCeEEECCCCC-EEEec-----CCcEEEECCCCC
Confidence 2233456677887 55532 357999998533
No 457
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.50 E-value=0.12 Score=54.18 Aligned_cols=163 Identities=7% Similarity=0.006 Sum_probs=97.1
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.++++.+.++.||++-. ...+|.+.++.... ...+..... ....+++++|++.+|++.
T Consensus 80 ~glavd~~~~~ly~~d~------------------~~~~I~~~~~~g~~--~~~~~~~~~--~~P~~iavdp~~g~ly~~ 137 (316)
T 1ijq_A 80 DGLAVDWIHSNIYWTDS------------------VLGTVSVADTKGVK--RKTLFRENG--SKPRAIVVDPVHGFMYWT 137 (316)
T ss_dssp CEEEEETTTTEEEEEET------------------TTTEEEEEETTSSS--EEEEEECTT--CCEEEEEEETTTTEEEEE
T ss_pred CEEEEeecCCeEEEEEC------------------CCCEEEEEeCCCCc--eEEEEECCC--CCcceEEeCCCCCEEEEE
Confidence 57888878888988732 23467877775432 222333211 123478899999988876
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-ccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
... ....|+.+++++.. ...+.. ... ..-..++++++.||+.-. ...+|.++++++..
T Consensus 138 d~~---~~~~I~~~~~dG~~--------------~~~~~~~~~~~P~gla~d~~~~~lY~~D~---~~~~I~~~d~dg~~ 197 (316)
T 1ijq_A 138 DWG---TPAKIKKGGLNGVD--------------IYSLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGGN 197 (316)
T ss_dssp ECS---SSCEEEEEETTSCC--------------EEEEECSSCSCEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS
T ss_pred ccC---CCCeEEEEcCCCCC--------------eEEEEECCCCCceEEEEeccCCEEEEEEC---CCCeEEEEecCCCc
Confidence 532 13679999987521 112221 111 112347888999998643 35789999998654
Q ss_pred CeEEeccCC-CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeec
Q 003878 396 DWFEVIPEA-ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL 446 (789)
Q Consensus 396 ~~~~l~~~~-~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l 446 (789)
.+.+.... ....-.++++.. +.+|++...+ .+|.+++..+|+..+.+
T Consensus 198 -~~~~~~~~~~~~~P~giav~~-~~ly~~d~~~--~~V~~~~~~~g~~~~~i 245 (316)
T 1ijq_A 198 -RKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN--EAIFSANRLTGSDVNLL 245 (316)
T ss_dssp -CEEEEECTTTTSSEEEEEEET-TEEEEEETTT--TEEEEEETTTCCCCEEE
T ss_pred -eEEEeecCCccCCcEEEEEEC-CEEEEEECCC--CeEEEEeCCCCcceEEE
Confidence 34444321 112345777766 7888765433 47888888667654433
No 458
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=97.48 E-value=0.013 Score=64.26 Aligned_cols=197 Identities=8% Similarity=-0.086 Sum_probs=113.8
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
..++|+|||+ ||++.. ....|+++++.++.. ..+...... .. ++++|+|+.|++.
T Consensus 134 ~~la~d~~g~-lyv~d~------------------~~~~I~~id~~~g~~--~~~~~~~~~---~~-ia~~~~g~~l~~~ 188 (409)
T 3hrp_A 134 WGIAAVGNNT-VLAYQR------------------DDPRVRLISVDDNKV--TTVHPGFKG---GK-PAVTKDKQRVYSI 188 (409)
T ss_dssp EEEEECSTTE-EEEEET------------------TTTEEEEEETTTTEE--EEEEETCCB---CB-CEECTTSSEEEEE
T ss_pred eEEEEeCCCC-EEEEec------------------CCCcEEEEECCCCEE--EEeeccCCC---Cc-eeEecCCCcEEEE
Confidence 6789999987 666532 235688888865432 222232221 12 7899999988766
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEee----e-ccccceeEEEecCCCEEEEEECCCCCCceEEEEECC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL----I-DGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK 392 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l----~-~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~ 392 (789)
.... ...|++++..++. . ...+ . .........++|++..||+ ++. +.+|++++++
T Consensus 189 d~~~---~~~I~~~d~~~~~------------~-~~~~g~~~~~~~~~p~~iav~p~~g~lyv-~d~---~~~I~~~d~~ 248 (409)
T 3hrp_A 189 GWEG---THTVYVYMKASGW------------A-PTRIGQLGSTFSGKIGAVALDETEEWLYF-VDS---NKNFGRFNVK 248 (409)
T ss_dssp BSST---TCEEEEEEGGGTT------------C-EEEEEECCTTSCSCCCBCEECTTSSEEEE-ECT---TCEEEEEETT
T ss_pred ecCC---CceEEEEEcCCCc------------e-eEEeeeccchhcCCcEEEEEeCCCCeEEE-EEC---CCcEEEEECC
Confidence 4322 2379999876531 1 1111 1 1111112347886778888 443 4689999998
Q ss_pred CCCCeEEec---cCCCCcee--eeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceeeeccc-C--------------Ce
Q 003878 393 EPNDWFEVI---PEAERDVL--ESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI-E--------------IG 451 (789)
Q Consensus 393 ~~~~~~~l~---~~~~~~~i--~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~-~--------------~~ 451 (789)
++. ...+. .......- .++++++ ++.||++...+ .+|++++.+ |+. ..+.. . ..
T Consensus 249 ~~~-~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~--~~I~~~~~~-g~~-~~~~g~~~~~g~~dg~~~~~~~~ 323 (409)
T 3hrp_A 249 TQE-VTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNL--SSVYKITPD-GEC-EWFCGSATQKTVQDGLREEALFA 323 (409)
T ss_dssp TCC-EEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTT--TEEEEECTT-CCE-EEEEECTTCCSCBCEEGGGCBCS
T ss_pred CCC-EEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCC--CEEEEEecC-CCE-EEEEeCCCCCCcCCCcccccEeC
Confidence 775 23220 11111111 2788887 47888765544 379999987 543 22211 0 11
Q ss_pred eEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 452 SVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 452 ~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
...++.+++++. ++++-. ..-.+|+++++.+++
T Consensus 324 ~P~gia~d~dG~-lyvad~--~~~~~I~~~~~~~G~ 356 (409)
T 3hrp_A 324 QPNGMTVDEDGN-FYIVDG--FKGYCLRKLDILDGY 356 (409)
T ss_dssp SEEEEEECTTCC-EEEEET--TTTCEEEEEETTTTE
T ss_pred CCeEEEEeCCCC-EEEEeC--CCCCEEEEEECCCCE
Confidence 245677888887 665532 035689999977774
No 459
>4ebb_A Dipeptidyl peptidase 2; hydrolase; HET: MSE NAG; 2.00A {Homo sapiens} PDB: 3jyh_A* 3n0t_A*
Probab=97.42 E-value=0.0006 Score=76.22 Aligned_cols=115 Identities=23% Similarity=0.155 Sum_probs=78.0
Q ss_pred CCccEEEEEcCCCCccCCCCC--CHHHHHHHHcCCeEEEEEeecCCCCCCh---hHHh--cccccCCcchHHHHHHHHHH
Q 003878 536 GSHPCLLYGYGGFNISVTPSF--SVSRTILMRHLGAVFCIANIRGGGEYGE---EWHK--GGALAKKQNCFDDFISASEY 608 (789)
Q Consensus 536 ~~~P~ll~~hGg~~~~~~~~~--~~~~~~~l~~~G~~v~~~~~RG~g~~g~---~~~~--~~~~~~~~~~~~D~~~~~~~ 608 (789)
+..|++|++-|- +.. .... ...+..+..+.|..+++...|=-|+.-+ ...+ ..+...-..++.|+...+++
T Consensus 41 ~~gPIfl~~gGE-g~~-~~~~~~~g~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~st~~~nL~yLt~eQALaD~a~fi~~ 118 (472)
T 4ebb_A 41 GEGPIFFYTGNE-GDV-WAFANNSAFVAELAAERGALLVFAEHRYYGKSLPFGAQSTQRGHTELLTVEQALADFAELLRA 118 (472)
T ss_dssp TTCCEEEEECCS-SCH-HHHHHHCHHHHHHHHHHTCEEEEECCTTSTTCCTTGGGGGSTTSCTTCSHHHHHHHHHHHHHH
T ss_pred CCCcEEEEECCC-ccc-cccccCccHHHHHHHHhCCeEEEEecccccCCcCCCCCCccccccccCCHHHHHHHHHHHHHH
Confidence 447999999552 211 1111 1223456677899999999996554322 1111 11122334567899999999
Q ss_pred HHHcCCCCCCcEEEEeeChHHHHHHHHHHhCCCceeEEEecCCc
Q 003878 609 LISAGYTQSRKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGV 652 (789)
Q Consensus 609 L~~~~~~d~~~i~i~G~S~GG~l~~~~~~~~pd~f~a~v~~~p~ 652 (789)
+...--....+++++|+|+||.|++++-.++|+++.|+++.+++
T Consensus 119 ~k~~~~~~~~pwI~~GGSY~G~LaAW~R~kYP~lv~ga~ASSAp 162 (472)
T 4ebb_A 119 LRRDLGAQDAPAIAFGGSYGGMLSAYLRMKYPHLVAGALAASAP 162 (472)
T ss_dssp HHHHTTCTTCCEEEEEETHHHHHHHHHHHHCTTTCSEEEEETCC
T ss_pred HHhhcCCCCCCEEEEccCccchhhHHHHhhCCCeEEEEEecccc
Confidence 88764344579999999999999999999999999998887653
No 460
>2dsn_A Thermostable lipase; T1 lipase, hydrolase; 1.50A {Geobacillus zalihae} PDB: 3umj_A 2z5g_A 1ji3_A 3auk_A 2w22_A* 1ku0_A
Probab=97.42 E-value=0.00059 Score=73.90 Aligned_cols=102 Identities=9% Similarity=0.039 Sum_probs=61.1
Q ss_pred CccEEEEEcCCCCccCC-----CCCCH---HHHHHHHcCCeEEEEEeecCCCCCChhHHhcccccCCcchHHHHHHHHHH
Q 003878 537 SHPCLLYGYGGFNISVT-----PSFSV---SRTILMRHLGAVFCIANIRGGGEYGEEWHKGGALAKKQNCFDDFISASEY 608 (789)
Q Consensus 537 ~~P~ll~~hGg~~~~~~-----~~~~~---~~~~~l~~~G~~v~~~~~RG~g~~g~~~~~~~~~~~~~~~~~D~~~~~~~ 608 (789)
+.|.||++||..+.... ..|.. .....|.++||.|+.+|++|.|.. +..+ .++...++.
T Consensus 5 ~~~pVVLvHG~~g~~~~~~~~~~yW~~~~~~la~~L~~~G~~Via~Dl~g~G~s---~~~a----------~~l~~~i~~ 71 (387)
T 2dsn_A 5 NDAPIVLLHGFTGWGREEMFGFKYWGGVRGDIEQWLNDNGYRTYTLAVGPLSSN---WDRA----------CEAYAQLVG 71 (387)
T ss_dssp CCCCEEEECCSSCCCTTSGGGCCTTTTTTCCHHHHHHHTTCCEEEECCCSSBCH---HHHH----------HHHHHHHHC
T ss_pred CCCcEEEECCCCCCCcccccccchhhhhhHHHHHHHHHCCCEEEEecCCCCCCc---cccH----------HHHHHHHHh
Confidence 34558889998765422 22331 123556558999999999986531 1110 111111110
Q ss_pred --------HHHc-----------C----CCCCCcEEEEeeChHHHHHHHHHHh-------------------CC------
Q 003878 609 --------LISA-----------G----YTQSRKLCIEGGSNGGLLVGACINQ-------------------RP------ 640 (789)
Q Consensus 609 --------L~~~-----------~----~~d~~~i~i~G~S~GG~l~~~~~~~-------------------~p------ 640 (789)
+.+. . ....+++.++||||||+++..++.+ +|
T Consensus 72 ~~vDy~~~~a~~~~~~~~~~~l~~ll~~~~~~~kv~LVGHSmGG~va~~~a~~l~~~~~~e~~~~~~~~~~~~P~~~g~~ 151 (387)
T 2dsn_A 72 GTVDYGAAHAAKHGHARFGRTYPGLLPELKRGGRIHIIAHSQGGQTARMLVSLLENGSQEEREYAKAHNVSLSPLFEGGH 151 (387)
T ss_dssp EEEECCHHHHHHHTSCSEEEEECCSCGGGGTTCCEEEEEETTHHHHHHHHHHHHHHCCHHHHHHHHHHTCCCCGGGTCCC
T ss_pred hhhhhhhhhhhhccchhhhhhHHHHHHHhcCCCceEEEEECHHHHHHHHHHHHhccccccccccccccccccCccccccc
Confidence 1100 0 1234699999999999999988862 36
Q ss_pred CceeEEEecCC
Q 003878 641 DLFGCALAHVG 651 (789)
Q Consensus 641 d~f~a~v~~~p 651 (789)
++++.+|...+
T Consensus 152 ~~V~sLV~i~t 162 (387)
T 2dsn_A 152 HFVLSVTTIAT 162 (387)
T ss_dssp CCEEEEEEESC
T ss_pred cceeEEEEECC
Confidence 67888887654
No 461
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.40 E-value=0.024 Score=57.46 Aligned_cols=207 Identities=15% Similarity=0.189 Sum_probs=115.7
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
.++++|.||+++||.+.. .+.+|+..++. +.....+.+.. .....++++.++|++++
T Consensus 29 lSGla~~~~~~~L~aV~d------------------~~~~I~~ld~~-g~v~~~i~l~g---~~D~EGIa~~~~g~~~v- 85 (255)
T 3qqz_A 29 ISSLTWSAQSNTLFSTIN------------------KPAAIVEMTTN-GDLIRTIPLDF---VKDLETIEYIGDNQFVI- 85 (255)
T ss_dssp EEEEEEETTTTEEEEEEE------------------TTEEEEEEETT-CCEEEEEECSS---CSSEEEEEECSTTEEEE-
T ss_pred cceeEEeCCCCEEEEEEC------------------CCCeEEEEeCC-CCEEEEEecCC---CCChHHeEEeCCCEEEE-
Confidence 489999999999987643 24568877775 22222222221 12245788888887543
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEE--CCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVD--LKEP 394 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~d--l~~~ 394 (789)
. .++ ...++++++..... ...+.. ...+........+.+--.|++++++||+...++ ...|+.++ +.+.
T Consensus 86 s-~E~---~~~l~~~~v~~~~~-i~~~~~--~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~--p~~i~~~~g~~~~~ 156 (255)
T 3qqz_A 86 S-DER---DYAIYVISLTPNSE-VKILKK--IKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN--PIEVYKVNGLLSSN 156 (255)
T ss_dssp E-ETT---TTEEEEEEECTTCC-EEEEEE--EECCCSSCCCSSCCEEEEEETTTTEEEEEEESS--SEEEEEEESTTCSS
T ss_pred E-ECC---CCcEEEEEcCCCCe-eeeeee--eccccccccccCCcceEEEeCCCCEEEEEECcC--CceEEEEcccccCC
Confidence 3 232 35688887765210 000000 000000000111112345889999999876553 35788888 1221
Q ss_pred CCeEEec-----cCCCCceeeeEEEecC-CEEEEEEEeCCeEEEEEEECCCCceeeecccCC---------eeEEEeecc
Q 003878 395 NDWFEVI-----PEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEI---------GSVNAISAR 459 (789)
Q Consensus 395 ~~~~~l~-----~~~~~~~i~~v~~~~~-~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~---------~~v~~~s~s 459 (789)
. .+.+- ....-..++++++.+. +++++..... ..|..+|.+ |+.+..+.+.. ....+++++
T Consensus 157 ~-l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s--~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d 232 (255)
T 3qqz_A 157 E-LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHES--RALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMD 232 (255)
T ss_dssp C-CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTT--TEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEEC
T ss_pred c-eeeecchhhccccccCCceeEEEcCCCCeEEEEECCC--CeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEEC
Confidence 1 22210 0111224677888773 6777765544 478888987 77655555442 245788999
Q ss_pred cCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 460 REDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 460 ~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
++++ ++++ ..|..+|++...
T Consensus 233 ~~G~-lyIv----sE~n~~y~f~~~ 252 (255)
T 3qqz_A 233 ASGN-IYIV----SEPNRFYRFTPQ 252 (255)
T ss_dssp TTCC-EEEE----ETTTEEEEEEC-
T ss_pred CCCC-EEEE----cCCceEEEEEec
Confidence 9987 6665 467899998654
No 462
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.39 E-value=0.017 Score=65.28 Aligned_cols=122 Identities=9% Similarity=0.019 Sum_probs=67.2
Q ss_pred EEEecCCCEEEEEECCCCCCceEEEEECCCCC-----------CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEE
Q 003878 364 EVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-----------DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVL 432 (789)
Q Consensus 364 ~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~-----------~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L 432 (789)
..++|||+++|+ ++.. ..+|.++|+++.+ ....-++-. ..-..+++++++.+|++..-+ ++|
T Consensus 282 v~~sPDGk~v~V-~~~~--s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG--~gP~h~aF~~dG~aY~t~~ld--sqV 354 (595)
T 1fwx_A 282 CNMAPDKKHLCV-AGKL--SPTVTVLDVTRFDAVFYENADPRSAVVAEPELG--LGPLHTAFDGRGNAYTSLFLD--SQV 354 (595)
T ss_dssp EEECTTSSEEEE-ECTT--SSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCC--SCEEEEEECTTSEEEEEETTT--TEE
T ss_pred EEEcCCCCEEEE-eCCC--CCeEEEEECcccccccccccCcccceEEEcCCC--CCcceEEECCCCeEEEEEecC--CcE
Confidence 458999998775 5543 3578888877431 011111111 223457788766555444333 478
Q ss_pred EEEECCC----------CceeeecccC--CeeEEE---eecccCCcEEEEEEc---------CCCCCcEEEEEECCCCCc
Q 003878 433 QIRDLKN----------GSLLHQLPIE--IGSVNA---ISARREDSVVFISFT---------SFLIPGIVYQCNLKTETP 488 (789)
Q Consensus 433 ~~~dl~t----------G~~~~~l~~~--~~~v~~---~s~s~d~~~l~~~~s---------s~~~P~~ly~~dl~tg~~ 488 (789)
.+||+++ .+.+..++.. .+.... .+.++||+.++..-. ++..|..-.++|..+++
T Consensus 355 ~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~~- 433 (595)
T 1fwx_A 355 VKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISGDK- 433 (595)
T ss_dssp EEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSSSS-
T ss_pred EEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCCCc-
Confidence 8899875 2233344433 233322 245789998765432 12345566777776664
Q ss_pred eEEEee
Q 003878 489 EMKIFR 494 (789)
Q Consensus 489 ~~~~l~ 494 (789)
++++.
T Consensus 434 -m~lv~ 438 (595)
T 1fwx_A 434 -MVLVH 438 (595)
T ss_dssp -CEEEE
T ss_pred -EEEEE
Confidence 55544
No 463
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=97.38 E-value=0.1 Score=53.13 Aligned_cols=190 Identities=11% Similarity=0.024 Sum_probs=101.9
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.++++.|||+ |+++.. ....|++++. ++. ...+..+........+.+++||+ +++.
T Consensus 102 ~~i~~~~~g~-l~v~~~------------------~~~~i~~~d~-~g~---~~~~~~~~~~~~~~~i~~~~~g~-l~v~ 157 (299)
T 2z2n_A 102 YGITEGPNGD-IWFTEM------------------NGNRIGRITD-DGK---IREYELPNKGSYPSFITLGSDNA-LWFT 157 (299)
T ss_dssp EEEEECTTSC-EEEEET------------------TTTEEEEECT-TCC---EEEEECSSTTCCEEEEEECTTSC-EEEE
T ss_pred eeeEECCCCC-EEEEec------------------CCceEEEECC-CCC---EEEecCCCCCCCCceEEEcCCCC-EEEE
Confidence 5677888874 555432 1235777766 221 12222221222345788899995 4443
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEee--ecccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKL--IDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 394 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l--~~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~ 394 (789)
.. . ...|++++. ++. +... ..... .....++++|+ +|+.+.. ...|++++. ++
T Consensus 158 ~~-~---~~~i~~~~~-~g~--------------~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~---~~~i~~~~~-~g 213 (299)
T 2z2n_A 158 EN-Q---NNAIGRITE-SGD--------------ITEFKIPTPASGPVGITKGNDDA-LWFVEII---GNKIGRITT-SG 213 (299)
T ss_dssp ET-T---TTEEEEECT-TCC--------------EEEEECSSTTCCEEEEEECTTSS-EEEEETT---TTEEEEECT-TC
T ss_pred eC-C---CCEEEEEcC-CCc--------------EEEeeCCCCCCcceeEEECCCCC-EEEEccC---CceEEEECC-CC
Confidence 32 1 356888988 432 1111 11111 11123567776 6655432 357999998 55
Q ss_pred CCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC--CeeEEEeecccCCcEEEEEEcCC
Q 003878 395 NDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSF 472 (789)
Q Consensus 395 ~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~--~~~v~~~s~s~d~~~l~~~~ss~ 472 (789)
. ...+........+.++.+.+++.+++....+ ..|.+++.+ |+. ..+..+ ...+..+.. +++. ++++.+
T Consensus 214 ~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~--~~i~~~d~~-g~~-~~~~~~~~~~~~~~i~~-~~g~-l~v~~~-- 284 (299)
T 2z2n_A 214 E-ITEFKIPTPNARPHAITAGAGIDLWFTEWGA--NKIGRLTSN-NII-EEYPIQIKSAEPHGICF-DGET-IWFAME-- 284 (299)
T ss_dssp C-EEEEECSSTTCCEEEEEECSTTCEEEEETTT--TEEEEEETT-TEE-EEEECSSSSCCEEEEEE-CSSC-EEEEET--
T ss_pred c-EEEEECCCCCCCceeEEECCCCCEEEeccCC--ceEEEECCC-Cce-EEEeCCCCCCccceEEe-cCCC-EEEEec--
Confidence 4 4433222223456778888766777665333 378999984 654 344333 334556666 5554 666532
Q ss_pred CCCcEEEEEECCCC
Q 003878 473 LIPGIVYQCNLKTE 486 (789)
Q Consensus 473 ~~P~~ly~~dl~tg 486 (789)
...++++++.++
T Consensus 285 --~~~l~~~~~~~~ 296 (299)
T 2z2n_A 285 --CDKIGKLTLIKD 296 (299)
T ss_dssp --TTEEEEEEEC--
T ss_pred --CCcEEEEEcCcc
Confidence 368889888765
No 464
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.38 E-value=0.047 Score=57.47 Aligned_cols=162 Identities=9% Similarity=-0.005 Sum_probs=98.6
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.++++.+.++.||++-. ....|.+.++..... ..+.... -..-.++++.|++.+|+++
T Consensus 82 ~glavd~~~g~ly~~d~------------------~~~~I~~~~~dG~~~--~~l~~~~--~~~P~giavdp~~g~ly~t 139 (318)
T 3sov_A 82 DGLACDWLGEKLYWTDS------------------ETNRIEVSNLDGSLR--KVLFWQE--LDQPRAIALDPSSGFMYWT 139 (318)
T ss_dssp CEEEEETTTTEEEEEET------------------TTTEEEEEETTSCSC--EEEECSS--CSSEEEEEEEGGGTEEEEE
T ss_pred cEEEEEcCCCeEEEEEC------------------CCCEEEEEECCCCcE--EEEEeCC--CCCccEEEEeCCCCEEEEE
Confidence 56888877888888732 234688888765322 2333221 1123478899988888876
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-ccccc-eeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~~~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
... ....|+.+++++.. ...+. .+... .-..++++++.||+.- ..+.+|+++++++..
T Consensus 140 d~~---~~~~I~r~~~dG~~--------------~~~~~~~~l~~Pnglavd~~~~~lY~aD---~~~~~I~~~d~dG~~ 199 (318)
T 3sov_A 140 DWG---EVPKIERAGMDGSS--------------RFIIINSEIYWPNGLTLDYEEQKLYWAD---AKLNFIHKSNLDGTN 199 (318)
T ss_dssp ECS---SSCEEEEEETTSCS--------------CEEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSCS
T ss_pred ecC---CCCEEEEEEcCCCC--------------eEEEEECCCCCccEEEEeccCCEEEEEE---CCCCEEEEEcCCCCc
Confidence 432 14679999987521 12222 12111 1234788899999864 345799999998754
Q ss_pred CeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeec
Q 003878 396 DWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL 446 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l 446 (789)
.+.++... ...-.++++.. +.+|++-.. ...|.+++..+|+..+.|
T Consensus 200 -~~~~~~~~-~~~P~glav~~-~~lywtd~~--~~~V~~~~~~~G~~~~~i 245 (318)
T 3sov_A 200 -RQAVVKGS-LPHPFALTLFE-DILYWTDWS--THSILACNKYTGEGLREI 245 (318)
T ss_dssp -CEEEECSC-CSCEEEEEEET-TEEEEEETT--TTEEEEEETTTCCSCEEE
T ss_pred -eEEEecCC-CCCceEEEEeC-CEEEEEecC--CCeEEEEECCCCCceEEE
Confidence 44555422 23345777776 788877433 348889998777654444
No 465
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.37 E-value=0.026 Score=56.57 Aligned_cols=194 Identities=14% Similarity=0.146 Sum_probs=118.8
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.++.|++ ..||.+... .....|.+.++.++...... ..+.. . .+...+++|+.|+..
T Consensus 24 qGL~~~~--~~LyestG~----------------~g~S~v~~vD~~tgkv~~~~--~l~~~-~--fgeGi~~~~~~ly~l 80 (243)
T 3mbr_X 24 EGLFYLR--GHLYESTGE----------------TGRSSVRKVDLETGRILQRA--EVPPP-Y--FGAGIVAWRDRLIQL 80 (243)
T ss_dssp EEEEEET--TEEEEEECC----------------TTSCEEEEEETTTCCEEEEE--ECCTT-C--CEEEEEEETTEEEEE
T ss_pred ccEEEEC--CEEEEECCC----------------CCCceEEEEECCCCCEEEEE--eCCCC-c--ceeEEEEeCCEEEEE
Confidence 6888863 577776432 12457889999876543222 22222 2 234456678888776
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCe
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDW 397 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~ 397 (789)
... .+.++++|.++.. ....+..+ ...+. +++||++||+ +|. ..+|+.+|.++.+..
T Consensus 81 tw~----~~~v~v~D~~tl~-------------~~~ti~~~-~~Gwg-lt~dg~~L~v-Sdg---s~~l~~iDp~t~~~~ 137 (243)
T 3mbr_X 81 TWR----NHEGFVYDLATLT-------------PRARFRYP-GEGWA-LTSDDSHLYM-SDG---TAVIRKLDPDTLQQV 137 (243)
T ss_dssp ESS----SSEEEEEETTTTE-------------EEEEEECS-SCCCE-EEECSSCEEE-ECS---SSEEEEECTTTCCEE
T ss_pred Eee----CCEEEEEECCcCc-------------EEEEEeCC-CCceE-EeeCCCEEEE-ECC---CCeEEEEeCCCCeEE
Confidence 532 4779999998842 11122111 12233 4678888775 442 467999999887622
Q ss_pred EEeccCC---CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-------------CeeEEEeecccC
Q 003878 398 FEVIPEA---ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-------------IGSVNAISARRE 461 (789)
Q Consensus 398 ~~l~~~~---~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~-------------~~~v~~~s~s~d 461 (789)
..+--.. +-..+..+.+.+ +++++.... .+.|.++|+++|+.+..|.+. .....+++.+++
T Consensus 138 ~~I~V~~~g~~~~~lNeLe~~~-G~lyanvw~--s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~ 214 (243)
T 3mbr_X 138 GSIKVTAGGRPLDNLNELEWVN-GELLANVWL--TSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAE 214 (243)
T ss_dssp EEEECEETTEECCCEEEEEEET-TEEEEEETT--TTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETT
T ss_pred EEEEEccCCcccccceeeEEeC-CEEEEEECC--CCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCC
Confidence 2222111 113455677776 787755433 348999999999976666532 124578899999
Q ss_pred CcEEEEEEcCCCCCcEEEEEEC
Q 003878 462 DSVVFISFTSFLIPGIVYQCNL 483 (789)
Q Consensus 462 ~~~l~~~~ss~~~P~~ly~~dl 483 (789)
+++++++---| +.+|.+.+
T Consensus 215 ~~~lfVTGK~w---p~~~~v~~ 233 (243)
T 3mbr_X 215 HDRLFVTGKRW---PMLYEIRL 233 (243)
T ss_dssp TTEEEEEETTC---SEEEEEEE
T ss_pred CCEEEEECCCC---CcEEEEEE
Confidence 99998876554 67777654
No 466
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.36 E-value=0.16 Score=55.15 Aligned_cols=164 Identities=8% Similarity=0.015 Sum_probs=97.2
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++..+.++.||++-. ...+|.+.++..... ..++...... -.++++.|.+.+|+++
T Consensus 162 ~glavD~~~~~lY~~d~------------------~~~~I~~~~~~g~~~-~~l~~~~~~~---P~~iavdp~~g~ly~t 219 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDS------------------VLGTVSVADTKGVKR-KTLFRENGSK---PRAIVVDPVHGFMYWT 219 (400)
T ss_dssp EEEEEETTTTEEEEEET------------------TTTEEEEECTTTCSE-EEEEECSSCC---EEEEEEETTTTEEEEE
T ss_pred ccEEEEecCCceEEEEC------------------CCCeEEEEeCCCCce-EEEEeCCCCC---cceEEEecccCeEEEE
Confidence 46777777888888732 234688777764432 2222222222 3478899998898876
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-ccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
.... ...|+.+++++.. ...+.. +.. ..-..++++++.||+.- ..+.+|.++++++..
T Consensus 220 d~~~---~~~I~~~~~dG~~--------------~~~~~~~~l~~P~glavd~~~~~lY~aD---~~~~~I~~~d~dG~~ 279 (400)
T 3p5b_L 220 DWGT---PAKIKKGGLNGVD--------------IYSLVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGGN 279 (400)
T ss_dssp ECSS---SCCEEEEETTSCS--------------CEEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSCC
T ss_pred eCCC---CCEEEEEeCCCCc--------------cEEEEECCCCceEEEEEEeCCCEEEEEE---CCCCEEEEEeCCCCc
Confidence 5321 3569999987631 122222 111 11234788889999863 345789999998765
Q ss_pred CeEEeccCC-CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecc
Q 003878 396 DWFEVIPEA-ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP 447 (789)
Q Consensus 396 ~~~~l~~~~-~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~ 447 (789)
.+.++... ....-.++++.. +.+|++-..+ .+|++++..+|+..+.|.
T Consensus 280 -~~~~~~~~~~l~~P~gl~v~~-~~lywtd~~~--~~V~~~~~~~G~~~~~i~ 328 (400)
T 3p5b_L 280 -RKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN--EAIFSANRLTGSDVNLLA 328 (400)
T ss_dssp -CEEEEECSSTTSSEEEEEEET-TEEEEEESSS--CSEEEEESSSCCCCEEEE
T ss_pred -cEEEEeCCCCCCCCEEEEEeC-CEEEEecCCC--CeEEEEEcCCCCceEEEe
Confidence 34444321 112334677766 7888766433 478888866676544443
No 467
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.35 E-value=0.065 Score=58.33 Aligned_cols=201 Identities=11% Similarity=-0.002 Sum_probs=114.3
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCC--CCcEEEEecCCCCeeEEEEEEecCCcEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ--SEDILCWKDPEHPKYIFSGHVTEDGQYL 314 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~--~~~~~~~~~~~~~~~~~~~~~SpDG~~l 314 (789)
..+++|.+.+..||++-. ...+|++.++.... .....+.... .....++++.+.++.|
T Consensus 114 ~~~l~~d~~~~~lywsD~------------------~~~~I~~~~~~g~~~~~~~~~~~~~~--~~~p~glavD~~~~~l 173 (400)
T 3p5b_L 114 VVALDTEVASNRIYWSDL------------------SQRMICSTQLDRAHGVSSYDTVISRD--IQAPDGLAVDWIHSNI 173 (400)
T ss_dssp EEEEEEETTTTEEEEEET------------------TTTEEEEEEC------CCCEEEECSS--CSCEEEEEEETTTTEE
T ss_pred ceEEeeeeccCceEEEec------------------CCCeEEEEEcccCCCCCcceEEEeCC--CCCcccEEEEecCCce
Confidence 368999998889998732 23468888876422 1223333321 1123467888878888
Q ss_pred EEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-ccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECC
Q 003878 315 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK 392 (789)
Q Consensus 315 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~ 392 (789)
++.-.. ...|.++++++.. ...+.. ... ..--.+.|.+..||+.... .+.+|++++++
T Consensus 174 Y~~d~~----~~~I~~~~~~g~~--------------~~~l~~~~~~~P~~iavdp~~g~ly~td~~--~~~~I~~~~~d 233 (400)
T 3p5b_L 174 YWTDSV----LGTVSVADTKGVK--------------RKTLFRENGSKPRAIVVDPVHGFMYWTDWG--TPAKIKKGGLN 233 (400)
T ss_dssp EEEETT----TTEEEEECTTTCS--------------EEEEEECSSCCEEEEEEETTTTEEEEEECS--SSCCEEEEETT
T ss_pred EEEECC----CCeEEEEeCCCCc--------------eEEEEeCCCCCcceEEEecccCeEEEEeCC--CCCEEEEEeCC
Confidence 776422 4578899887631 122222 221 1112367778888876432 24689999998
Q ss_pred CCCCeEEeccCCCCceeeeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceeeecc-cC--CeeEEEeecccCCcEEEEE
Q 003878 393 EPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLP-IE--IGSVNAISARREDSVVFIS 468 (789)
Q Consensus 393 ~~~~~~~l~~~~~~~~i~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~-~~--~~~v~~~s~s~d~~~l~~~ 468 (789)
+.. .+.++... -..-.+++++. ++.||++-.. ..+|++++++ |...+.+. .+ .....+++. +++.++++
T Consensus 234 G~~-~~~~~~~~-l~~P~glavd~~~~~lY~aD~~--~~~I~~~d~d-G~~~~~~~~~~~~l~~P~gl~v--~~~~lywt 306 (400)
T 3p5b_L 234 GVD-IYSLVTEN-IQWPNGITLDLLSGRLYWVDSK--LHSISSIDVN-GGNRKTILEDEKRLAHPFSLAV--FEDKVFWT 306 (400)
T ss_dssp SCS-CEEEECSS-CSCEEEEEEETTTTEEEEEETT--TTEEEEEETT-SCCCEEEEECSSTTSSEEEEEE--ETTEEEEE
T ss_pred CCc-cEEEEECC-CCceEEEEEEeCCCEEEEEECC--CCEEEEEeCC-CCccEEEEeCCCCCCCCEEEEE--eCCEEEEe
Confidence 765 34454433 23456788884 3677776433 3589999997 54323332 11 112223443 45566664
Q ss_pred EcCCCCCcEEEEEECCCCC
Q 003878 469 FTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 469 ~ss~~~P~~ly~~dl~tg~ 487 (789)
- ..-.+|+++|..+|+
T Consensus 307 d---~~~~~V~~~~~~~G~ 322 (400)
T 3p5b_L 307 D---IINEAIFSANRLTGS 322 (400)
T ss_dssp E---SSSCSEEEEESSSCC
T ss_pred c---CCCCeEEEEEcCCCC
Confidence 3 334578888866664
No 468
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.34 E-value=0.11 Score=52.59 Aligned_cols=228 Identities=12% Similarity=0.031 Sum_probs=122.8
Q ss_pred ceEEeccCCCCCCCcEEEEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceeccc-ccccccccccCccceeeeeec
Q 003878 117 AKVLLDPNTLSDDGTAALIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADA-LSWVCFCFSHSFGYFFHLTIS 195 (789)
Q Consensus 117 ~~~l~d~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 195 (789)
.++.++...|..-.. .++++++.||++.|..+.+. ...|+.+|+. |+++... +.+.
T Consensus 13 y~~~~~~~~l~g~~~-~lSGla~~~~~~~L~aV~d~----~~~I~~ld~~-g~v~~~i~l~g~----------------- 69 (255)
T 3qqz_A 13 YHATIDGKEIAGITN-NISSLTWSAQSNTLFSTINK----PAAIVEMTTN-GDLIRTIPLDFV----------------- 69 (255)
T ss_dssp CEEEEEEEECTTCCS-CEEEEEEETTTTEEEEEEET----TEEEEEEETT-CCEEEEEECSSC-----------------
T ss_pred eEEEEeceECCCccc-CcceeEEeCCCCEEEEEECC----CCeEEEEeCC-CCEEEEEecCCC-----------------
Confidence 355566444432211 37899999999887655554 3579999998 6654311 1111
Q ss_pred cccccccccccccccceeeEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCccc
Q 003878 196 LLNVPTYKLFLYLRGIFFFFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYH 275 (789)
Q Consensus 196 ~~~~p~~~~~~~~~~~~~~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~ 275 (789)
.+..++++.+||+ ++++. .+..
T Consensus 70 ---------------------------------------~D~EGIa~~~~g~-~~vs~------------------E~~~ 91 (255)
T 3qqz_A 70 ---------------------------------------KDLETIEYIGDNQ-FVISD------------------ERDY 91 (255)
T ss_dssp ---------------------------------------SSEEEEEECSTTE-EEEEE------------------TTTT
T ss_pred ---------------------------------------CChHHeEEeCCCE-EEEEE------------------CCCC
Confidence 0347889988774 44442 1235
Q ss_pred EEEEEECCCCCC-CcEEEEecC----CCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCC
Q 003878 276 EFYYHFLGTKQS-EDILCWKDP----EHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLL 350 (789)
Q Consensus 276 ~i~~~~lg~~~~-~~~~~~~~~----~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~ 350 (789)
+++++.++.... ..+.....+ .....+.+++++|++++|++...+. ...||.++--.....+..+ . ..
T Consensus 92 ~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~---p~~i~~~~g~~~~~~l~i~-~---~~ 164 (255)
T 3qqz_A 92 AIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKN---PIEVYKVNGLLSSNELHIS-K---DK 164 (255)
T ss_dssp EEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESS---SEEEEEEESTTCSSCCEEE-E---CH
T ss_pred cEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcC---CceEEEEcccccCCceeee-c---ch
Confidence 677777765432 111111111 1112256899999999998866543 3568888710000000000 0 00
Q ss_pred ccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC-CeEEeccCC-----CCceeeeEEEecCCEEEEEE
Q 003878 351 PFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN-DWFEVIPEA-----ERDVLESATAVNLNQMIVSY 424 (789)
Q Consensus 351 ~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~-~~~~l~~~~-----~~~~i~~v~~~~~~~lv~~~ 424 (789)
.+.....-.+..-..+.|..++||+++... ..|+.+|.++.- ....|.+.. .-..-+++++.+++.+|++.
T Consensus 165 ~~~~~~~~~d~S~l~~dp~tg~lliLS~~s---~~L~~~d~~g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~lyIvs 241 (255)
T 3qqz_A 165 ALQRQFTLDDVSGAEFNQQKNTLLVLSHES---RALQEVTLVGEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGNIYIVS 241 (255)
T ss_dssp HHHHTCCSSCCCEEEEETTTTEEEEEETTT---TEEEEECTTCCEEEEEECSTTGGGCSSCCCSEEEEEECTTCCEEEEE
T ss_pred hhccccccCCceeEEEcCCCCeEEEEECCC---CeEEEEcCCCCEEEEEEcCCccCCcccccCCCCeeEECCCCCEEEEc
Confidence 000000011222234678778999998753 678888877542 122232211 01234789999877787764
Q ss_pred EeCCeEEEEEEECC
Q 003878 425 LSDVKYVLQIRDLK 438 (789)
Q Consensus 425 ~~~g~~~L~~~dl~ 438 (789)
..| .+|++...
T Consensus 242 E~n---~~y~f~~~ 252 (255)
T 3qqz_A 242 EPN---RFYRFTPQ 252 (255)
T ss_dssp TTT---EEEEEEC-
T ss_pred CCc---eEEEEEec
Confidence 433 78888765
No 469
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.28 E-value=0.002 Score=72.95 Aligned_cols=80 Identities=8% Similarity=0.009 Sum_probs=44.5
Q ss_pred EEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcc-cccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCC
Q 003878 304 SGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLE-GFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAP 382 (789)
Q Consensus 304 ~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~-~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~ 382 (789)
++.+||||++++++.. . .+.+.++|+++.+.... .+.+. ......+..+.......|++|| .+|.....
T Consensus 281 Gv~~sPDGk~v~V~~~--~--s~~VsVid~~~~~~~~~~~l~~~--~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~l--- 350 (595)
T 1fwx_A 281 GCNMAPDKKHLCVAGK--L--SPTVTVLDVTRFDAVFYENADPR--SAVVAEPELGLGPLHTAFDGRG-NAYTSLFL--- 350 (595)
T ss_dssp CEEECTTSSEEEEECT--T--SSBEEEEEGGGHHHHHHSCCCGG--GGEEECCBCCSCEEEEEECTTS-EEEEEETT---
T ss_pred EEEEcCCCCEEEEeCC--C--CCeEEEEECcccccccccccCcc--cceEEEcCCCCCcceEEECCCC-eEEEEEec---
Confidence 5789999999987542 2 46799999885210000 00000 0011122223333445689999 66654433
Q ss_pred CceEEEEECCC
Q 003878 383 KYKIIRVDLKE 393 (789)
Q Consensus 383 ~~~L~~~dl~~ 393 (789)
..+|.++++++
T Consensus 351 dsqV~kwdi~~ 361 (595)
T 1fwx_A 351 DSQVVKWNIED 361 (595)
T ss_dssp TTEEEEEEHHH
T ss_pred CCcEEEEEhhH
Confidence 36788899865
No 470
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=97.27 E-value=0.017 Score=60.60 Aligned_cols=159 Identities=9% Similarity=0.046 Sum_probs=94.5
Q ss_pred EEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-c-cccceeEEEecCCCEEEEEECC
Q 003878 302 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-D-GFDAQYEVIANDDTVFTFLTNK 379 (789)
Q Consensus 302 ~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~-~~~~~~~~~s~dG~~l~~~tn~ 379 (789)
..++.|+|||+ |++.... ...|+++|.+++. ...+. . ........++++|+ +++.+..
T Consensus 47 ~~~~~~~~~g~-l~~~~~~----~~~i~~~d~~~~~--------------~~~~~~~~~~~~~~i~~~~dg~-l~v~~~~ 106 (333)
T 2dg1_A 47 LEGLNFDRQGQ-LFLLDVF----EGNIFKINPETKE--------------IKRPFVSHKANPAAIKIHKDGR-LFVCYLG 106 (333)
T ss_dssp EEEEEECTTSC-EEEEETT----TCEEEEECTTTCC--------------EEEEEECSSSSEEEEEECTTSC-EEEEECT
T ss_pred ccCcEECCCCC-EEEEECC----CCEEEEEeCCCCc--------------EEEEeeCCCCCcceEEECCCCc-EEEEeCC
Confidence 46789999998 4443321 3579999987642 12221 1 11112234788886 4444432
Q ss_pred C-CCCceEEEEECCCCCCeEEecc-CCCCceeeeEEEecCCEEEEEEEeC----CeEEEEEEECCCCceeeecccCCeeE
Q 003878 380 D-APKYKIIRVDLKEPNDWFEVIP-EAERDVLESATAVNLNQMIVSYLSD----VKYVLQIRDLKNGSLLHQLPIEIGSV 453 (789)
Q Consensus 380 ~-~~~~~L~~~dl~~~~~~~~l~~-~~~~~~i~~v~~~~~~~lv~~~~~~----g~~~L~~~dl~tG~~~~~l~~~~~~v 453 (789)
+ .....|+++|.+++. .+.++. ......+.++.+++++.+++....+ ....|++++.++++. ..+.......
T Consensus 107 ~~~~~~~i~~~d~~~~~-~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~ 184 (333)
T 2dg1_A 107 DFKSTGGIFAATENGDN-LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV-TPIIQNISVA 184 (333)
T ss_dssp TSSSCCEEEEECTTSCS-CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE-EEEEEEESSE
T ss_pred CCCCCceEEEEeCCCCE-EEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE-EEeecCCCcc
Confidence 1 122589999988775 443333 2223456778888867777765431 235899999875554 3332222234
Q ss_pred EEeecccCCcEEEEEEcCCCCCcEEEEEECCC
Q 003878 454 NAISARREDSVVFISFTSFLIPGIVYQCNLKT 485 (789)
Q Consensus 454 ~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~t 485 (789)
..+.++++++.++++-+. -..+++||+.+
T Consensus 185 ~~i~~~~dg~~l~v~~~~---~~~i~~~d~~~ 213 (333)
T 2dg1_A 185 NGIALSTDEKVLWVTETT---ANRLHRIALED 213 (333)
T ss_dssp EEEEECTTSSEEEEEEGG---GTEEEEEEECT
T ss_pred cceEECCCCCEEEEEeCC---CCeEEEEEecC
Confidence 567889999888775432 35899999864
No 471
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.27 E-value=0.2 Score=50.91 Aligned_cols=193 Identities=9% Similarity=-0.011 Sum_probs=104.3
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.++++.+||+ |+++.. ....|++++.. +. ...+..+.......++.++++|+.. +.
T Consensus 65 ~~i~~~~~g~-l~v~~~------------------~~~~v~~~d~~-g~---~~~~~~~~~~~~~~~i~~~~~g~l~-v~ 120 (300)
T 2qc5_A 65 MCLIVSSLGD-IWFTEN------------------GANKIGKLSKK-GG---FTEYPLPQPDSGPYGITEGLNGDIW-FT 120 (300)
T ss_dssp EEEEECTTSC-EEEEET------------------TTTEEEEECTT-SC---EEEEECSSTTCCEEEEEECSTTCEE-EE
T ss_pred eeEEECCCCC-EEEEec------------------CCCeEEEECCC-CC---eEEecCCCCCCCCccceECCCCCEE-EE
Confidence 5677888875 555432 12346666654 21 1223322112334577888998743 33
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccc-cceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGF-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND 396 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~-~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~ 396 (789)
.. . ...|+.++.+ +.. . ...+.... ......++++|+ +|+.... +..|++++. +++
T Consensus 121 ~~-~---~~~i~~~~~~-g~~-----------~-~~~~~~~~~~~~~i~~d~~g~-l~v~~~~---~~~i~~~~~-~g~- 177 (300)
T 2qc5_A 121 QL-N---GDRIGKLTAD-GTI-----------Y-EYDLPNKGSYPAFITLGSDNA-LWFTENQ---NNSIGRITN-TGK- 177 (300)
T ss_dssp ET-T---TTEEEEECTT-SCE-----------E-EEECSSTTCCEEEEEECTTSS-EEEEETT---TTEEEEECT-TCC-
T ss_pred cc-C---CCeEEEECCC-CCE-----------E-EccCCCCCCCceeEEECCCCC-EEEEecC---CCeEEEECC-CCc-
Confidence 31 1 3468888876 320 0 00111111 111223667787 6665432 357999998 444
Q ss_pred eEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC--CeeEEEeecccCCcEEEEEEcCCCC
Q 003878 397 WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTSFLI 474 (789)
Q Consensus 397 ~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~--~~~v~~~s~s~d~~~l~~~~ss~~~ 474 (789)
...+..........++.+.+++.+++.....+ .|++++. +|+. ..+..+ ...+..+..++++. ++++.. .
T Consensus 178 ~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~--~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~d~~g~-l~v~~~---~ 249 (300)
T 2qc5_A 178 LEEYPLPTNAAAPVGITSGNDGALWFVEIMGN--KIGRITT-TGEI-SEYDIPTPNARPHAITAGKNSE-IWFTEW---G 249 (300)
T ss_dssp EEEEECSSTTCCEEEEEECTTSSEEEEETTTT--EEEEECT-TCCE-EEEECSSTTCCEEEEEECSTTC-EEEEET---T
T ss_pred EEEeeCCCCCCCcceEEECCCCCEEEEccCCC--EEEEEcC-CCcE-EEEECCCCCCCceEEEECCCCC-EEEecc---C
Confidence 33332222224466788877667777654433 6889998 4664 233222 34455677788876 666542 2
Q ss_pred CcEEEEEECCCC
Q 003878 475 PGIVYQCNLKTE 486 (789)
Q Consensus 475 P~~ly~~dl~tg 486 (789)
...++++|. ++
T Consensus 250 ~~~i~~~~~-~g 260 (300)
T 2qc5_A 250 ANQIGRITN-DN 260 (300)
T ss_dssp TTEEEEECT-TS
T ss_pred CCeEEEECC-CC
Confidence 568999998 45
No 472
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=97.27 E-value=0.022 Score=60.05 Aligned_cols=152 Identities=8% Similarity=-0.090 Sum_probs=93.4
Q ss_pred EEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCC
Q 003878 302 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDA 381 (789)
Q Consensus 302 ~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~ 381 (789)
..++.|+||++.+++.... ...|++++.+++. ..............++++|+. ++.+.
T Consensus 51 ~egp~~~~~~~~l~~~d~~----~~~i~~~d~~~~~--------------~~~~~~~~~v~~i~~~~dg~l-~v~~~--- 108 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNIL----ERELHELHLASGR--------------KTVHALPFMGSALAKISDSKQ-LIASD--- 108 (326)
T ss_dssp EEEEEEETTTTEEEEEEGG----GTEEEEEETTTTE--------------EEEEECSSCEEEEEEEETTEE-EEEET---
T ss_pred CcCCeEeCCCCEEEEEECC----CCEEEEEECCCCc--------------EEEEECCCcceEEEEeCCCeE-EEEEC---
Confidence 4578999998888776533 3569999988742 111111111122347888764 44442
Q ss_pred CCceEEEEECCCCCCeEEeccCC---CCceeeeEEEecCCEEEEEEEeC----CeEEEEEEECCCCceeeecccCCeeEE
Q 003878 382 PKYKIIRVDLKEPNDWFEVIPEA---ERDVLESATAVNLNQMIVSYLSD----VKYVLQIRDLKNGSLLHQLPIEIGSVN 454 (789)
Q Consensus 382 ~~~~L~~~dl~~~~~~~~l~~~~---~~~~i~~v~~~~~~~lv~~~~~~----g~~~L~~~dl~tG~~~~~l~~~~~~v~ 454 (789)
..|+++|.++++ .+.+.... ....+.++.+++++.+++..... ....|++++ + |+. +.+........
T Consensus 109 --~gl~~~d~~~g~-~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~-~-g~~-~~~~~~~~~~~ 182 (326)
T 2ghs_A 109 --DGLFLRDTATGV-LTLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA-K-GKV-TKLFADISIPN 182 (326)
T ss_dssp --TEEEEEETTTCC-EEEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE-T-TEE-EEEEEEESSEE
T ss_pred --CCEEEEECCCCc-EEEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe-C-CcE-EEeeCCCcccC
Confidence 249999998776 55444321 12346778888867777765532 345899998 4 664 33322222344
Q ss_pred EeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 455 AISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 455 ~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
++.+++|++.++++-+. ...|+++++.
T Consensus 183 ~i~~s~dg~~lyv~~~~---~~~I~~~d~~ 209 (326)
T 2ghs_A 183 SICFSPDGTTGYFVDTK---VNRLMRVPLD 209 (326)
T ss_dssp EEEECTTSCEEEEEETT---TCEEEEEEBC
T ss_pred CeEEcCCCCEEEEEECC---CCEEEEEEcc
Confidence 67889999988775432 4689999975
No 473
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=97.26 E-value=0.013 Score=59.31 Aligned_cols=152 Identities=7% Similarity=-0.031 Sum_probs=82.6
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++++|||+ |+++.. ....|++++.++... . ..... ......++.+++||+ |++.
T Consensus 111 ~~i~~~~~g~-l~v~~~------------------~~~~i~~~~~~~~~~--~-~~~~~-~~~~p~~i~~~~~g~-l~v~ 166 (270)
T 1rwi_B 111 EGLAVDTQGA-VYVADR------------------GNNRVVKLAAGSKTQ--T-VLPFT-GLNDPDGVAVDNSGN-VYVT 166 (270)
T ss_dssp EEEEECTTCC-EEEEEG------------------GGTEEEEECTTCCSC--E-ECCCC-SCCSCCCEEECTTCC-EEEE
T ss_pred cceEECCCCC-EEEEEC------------------CCCEEEEEECCCcee--E-eeccc-cCCCceeEEEeCCCC-EEEE
Confidence 5788889886 655522 123577776544321 1 11111 111123578899998 5444
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND 396 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~ 396 (789)
... ...|++++.++.. .......+.. ..-..++++| .+|+.... +.+|.+++.++..
T Consensus 167 ~~~----~~~i~~~~~~~~~-------------~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~---~~~v~~~~~~~~~- 224 (270)
T 1rwi_B 167 DTD----NNRVVKLEAESNN-------------QVVLPFTDITAPWGIAVDEAG-TVYVTEHN---TNQVVKLLAGSTT- 224 (270)
T ss_dssp EGG----GTEEEEECTTTCC-------------EEECCCSSCCSEEEEEECTTC-CEEEEETT---TSCEEEECTTCSC-
T ss_pred ECC----CCEEEEEecCCCc-------------eEeecccCCCCceEEEECCCC-CEEEEECC---CCcEEEEcCCCCc-
Confidence 321 3568999877631 0000111111 1112367777 66765543 3579999987654
Q ss_pred eEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECC
Q 003878 397 WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLK 438 (789)
Q Consensus 397 ~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~ 438 (789)
. ..++........++.+.+++.+++....++ +|.++++.
T Consensus 225 ~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~--~v~~~~~~ 263 (270)
T 1rwi_B 225 S-TVLPFTGLNTPLAVAVDSDRTVYVADRGND--RVVKLTSL 263 (270)
T ss_dssp C-EECCCCSCSCEEEEEECTTCCEEEEEGGGT--EEEEECCC
T ss_pred c-eeeccCCCCCceeEEECCCCCEEEEECCCC--EEEEEcCC
Confidence 2 223322223467788887667777665554 78888876
No 474
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.25 E-value=0.037 Score=60.44 Aligned_cols=39 Identities=18% Similarity=0.062 Sum_probs=25.6
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceec
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEA 172 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~ 172 (789)
-..+..+|||=+|...-+..|+....|.++|.+|++++.
T Consensus 140 Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~ 178 (462)
T 2ece_A 140 LHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLG 178 (462)
T ss_dssp EEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEE
T ss_pred ccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEE
Confidence 345679999922222223334456789999999998764
No 475
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=97.22 E-value=0.13 Score=53.88 Aligned_cols=115 Identities=9% Similarity=0.012 Sum_probs=64.5
Q ss_pred EEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-cccc-cee-EEEecCCCEEEEEEC
Q 003878 302 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFD-AQY-EVIANDDTVFTFLTN 378 (789)
Q Consensus 302 ~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~~~~-~~~-~~~s~dG~~l~~~tn 378 (789)
..+++++||+..|++.... ...|.+++.+++. ....+. .... ..+ ..++| ..++....
T Consensus 198 p~gia~d~~~g~l~v~d~~----~~~I~~~~~~~G~-------------~~~~~~~~~~~~~~~~~~~~p--g~~~~~~g 258 (329)
T 3fvz_A 198 PHSLALVPHLDQLCVADRE----NGRIQCFKTDTKE-------------FVREIKHASFGRNVFAISYIP--GFLFAVNG 258 (329)
T ss_dssp EEEEEEETTTTEEEEEETT----TTEEEEEETTTCC-------------EEEEECCTTTTTCEEEEEEET--TEEEEEEC
T ss_pred CcEEEEECCCCEEEEEECC----CCEEEEEECCCCc-------------EEEEEeccccCCCcceeeecC--CEEEEeCC
Confidence 3578999997777665422 4679999988542 011111 1111 111 22555 23333222
Q ss_pred C----CCCCceEEEEECCCCCCeEEeccC--CCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECC
Q 003878 379 K----DAPKYKIIRVDLKEPNDWFEVIPE--AERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLK 438 (789)
Q Consensus 379 ~----~~~~~~L~~~dl~~~~~~~~l~~~--~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~ 438 (789)
. +..+.+++++++.+++ ....+.. .......++++++++.+|++...++ +|++|+++
T Consensus 259 ~~~v~~~~~~~v~~~~~~~g~-~~~~~~~~~~~~~~p~~ia~~~dG~lyvad~~~~--~I~~~~~~ 321 (329)
T 3fvz_A 259 KPYFGDQEPVQGFVMNFSSGE-IIDVFKPVRKHFDMPHDIVASEDGTVYIGDAHTN--TVWKFTLT 321 (329)
T ss_dssp CCCTTCSCCCCEEEEETTTCC-EEEEECCSSSCCSSEEEEEECTTSEEEEEESSSC--CEEEEEEE
T ss_pred CEEeccCCCcEEEEEEcCCCe-EEEEEcCCCCccCCeeEEEECCCCCEEEEECCCC--EEEEEeCC
Confidence 1 2234589999988876 3333321 1123456888888677777665554 78888876
No 476
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.20 E-value=0.2 Score=59.39 Aligned_cols=163 Identities=8% Similarity=0.009 Sum_probs=99.0
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++..+.++.||++-. ...+|++.++..... .+++..... .-.++++.|.+.+|+++
T Consensus 474 ~GLAvD~~~~~LY~tD~------------------~~~~I~v~~ldG~~~-~~l~~~~l~---~P~gIaVDp~~g~LYwt 531 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDS------------------VLGTVSVADTKGVKR-KTLFRENGS---KPRAIVVDPVHGFMYWT 531 (791)
T ss_dssp CEEEEETTTTEEEEEET------------------TTTEEEEEETTSSSE-EEEEECTTC---CEEEEEEETTTTEEEEE
T ss_pred ceeeeeecCCcEEEEec------------------CCCeEEEEeCCCCeE-EEEEeCCCC---CcceEEEecCCCCEEEe
Confidence 56788778889988732 234688888865432 233322222 23478899999999876
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-ccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
-... ...|+++++++.. ...+.. +.. ..-..+++.++.||+.- ..+.+|.++++++..
T Consensus 532 D~g~---~~~I~~~~~dG~~--------------~~~lv~~~l~~P~GLavD~~~~~LYwaD---~~~~~I~~~d~dG~~ 591 (791)
T 3m0c_C 532 DWGT---PAKIKKGGLNGVD--------------IYSLVTENIQWPNGITLDLLSGRLYWVD---SKLHSISSIDVNGGN 591 (791)
T ss_dssp ECSS---SCEEEEEETTSCC--------------EEEEECSSCSCEEEEEEETTTTEEEEEE---TTTTEEEEEETTSCS
T ss_pred cCCC---CCeEEEEecCCCc--------------eEEEEeCCCCCceEEEEecCCCeEEEEe---CCCCcEEEEecCCCc
Confidence 5321 3679999987631 222222 211 11123677788899863 345789999998765
Q ss_pred CeEEeccCC-CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeec
Q 003878 396 DWFEVIPEA-ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQL 446 (789)
Q Consensus 396 ~~~~l~~~~-~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l 446 (789)
.+.++... ....-.+++++. ++||++-..+ ..|++++..+|+.+..|
T Consensus 592 -~~~v~~~~~~l~~P~glav~~-~~lYwtD~~~--~~I~~~dk~tG~~~~~l 639 (791)
T 3m0c_C 592 -RKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN--EAIFSANRLTGSDVNLL 639 (791)
T ss_dssp -CEEEEECTTTTSSEEEEEEET-TEEEEEETTT--TEEEEEETTTCCCCEEE
T ss_pred -eEEEecCCCccCCCCEEEEeC-CEEEEEECCC--CEEEEEeCCCCcceEEe
Confidence 34454321 112234677776 7888765444 47888987777654444
No 477
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.18 E-value=0.0064 Score=67.21 Aligned_cols=169 Identities=10% Similarity=0.009 Sum_probs=97.9
Q ss_pred EEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccE--eeec-cccce-eEEEecC-CCEEEEE
Q 003878 302 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFV--KLID-GFDAQ-YEVIAND-DTVFTFL 376 (789)
Q Consensus 302 ~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~--~l~~-~~~~~-~~~~s~d-G~~l~~~ 376 (789)
+..++|||||++|++....+ .....|.++|+.++..+.. ....++. .... ..... ...|+|+ +..|+..
T Consensus 95 v~~l~~spdg~~lav~~~sg-s~d~~v~iwd~~~~~~~~~-----~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 95 IHHLALSCDNLTLSACMMSS-EYGSIIAFFDVRTFSNEAK-----QQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp EEEEEECTTSCEEEEEEEET-TTEEEEEEEEHHHHHCTTC-----SSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred ccEEEEcCCCCEEEEEEecc-CCCceEEEEEccccccCCc-----CCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 56789999999998743111 1256788898765200000 0001111 1111 11112 2348997 5555544
Q ss_pred ECCCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-------
Q 003878 377 TNKDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE------- 449 (789)
Q Consensus 377 tn~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~------- 449 (789)
+. ++.|..+|+.++........+ ...+..++|++++..+++...++ .|++||.+ ++....+..+
T Consensus 169 s~----Dg~v~iwD~~~~~~~~~~~~~--~~~v~~v~wspdg~~lasgs~dg--~v~iwd~~-~~~~~~~~~~~~~~~~~ 239 (434)
T 2oit_A 169 LA----DGSIAVLQVTETVKVCATLPS--TVAVTSVCWSPKGKQLAVGKQNG--TVVQYLPT-LQEKKVIPCPPFYESDH 239 (434)
T ss_dssp ET----TSCEEEEEESSSEEEEEEECG--GGCEEEEEECTTSSCEEEEETTS--CEEEECTT-CCEEEEECCCTTCCTTS
T ss_pred EC----CCeEEEEEcCCCcceeeccCC--CCceeEEEEcCCCCEEEEEcCCC--cEEEEccC-CcccccccCCcccCCCC
Confidence 33 356888998876422222222 24678899998777777777777 68899987 6554444433
Q ss_pred CeeEEEeecccCCcEEEEEEcCC----CCCcEEEEEECCCC
Q 003878 450 IGSVNAISARREDSVVFISFTSF----LIPGIVYQCNLKTE 486 (789)
Q Consensus 450 ~~~v~~~s~s~d~~~l~~~~ss~----~~P~~ly~~dl~tg 486 (789)
...+..+.+++++..++ .+++. ..++.++.|++.+.
T Consensus 240 ~~~v~~v~w~~~~~~l~-~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 240 PVRVLDVLWIGTYVFAI-VYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp CEEEEEEEEEETTEEEE-EEEETTCCSSSCCEEEEEECCCT
T ss_pred ceeEEEEEEecCceEEE-EEccCCCccCCCCceEEEEeccC
Confidence 12566788887665443 44322 45667888888654
No 478
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=97.12 E-value=0.29 Score=49.73 Aligned_cols=153 Identities=5% Similarity=0.003 Sum_probs=82.9
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++++|||+ |+++.. ....|++++... +....+..........++++++||+ +++.
T Consensus 124 ~~i~~~~~g~-l~v~~~------------------~~~~i~~~~~~g---~~~~~~~~~~~~~~p~~i~~~~~g~-l~v~ 180 (286)
T 1q7f_A 124 RGVTVDNKGR-IIVVEC------------------KVMRVIIFDQNG---NVLHKFGCSKHLEFPNGVVVNDKQE-IFIS 180 (286)
T ss_dssp EEEEECTTSC-EEEEET------------------TTTEEEEECTTS---CEEEEEECTTTCSSEEEEEECSSSE-EEEE
T ss_pred eEEEEeCCCC-EEEEEC------------------CCCEEEEEcCCC---CEEEEeCCCCccCCcEEEEECCCCC-EEEE
Confidence 5788999986 655522 224577776432 2222333222222345789999998 4443
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecc--cc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG--FD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 394 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~--~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~ 394 (789)
.. . ...|++++.++.. ...+... .. ..-..++++|+ +|+....+ +.+|.+++.++.
T Consensus 181 ~~-~---~~~i~~~~~~g~~--------------~~~~~~~g~~~~p~~i~~d~~G~-l~v~~~~~--~~~i~~~~~~g~ 239 (286)
T 1q7f_A 181 DN-R---AHCVKVFNYEGQY--------------LRQIGGEGITNYPIGVGINSNGE-ILIADNHN--NFNLTIFTQDGQ 239 (286)
T ss_dssp EG-G---GTEEEEEETTCCE--------------EEEESCTTTSCSEEEEEECTTCC-EEEEECSS--SCEEEEECTTSC
T ss_pred EC-C---CCEEEEEcCCCCE--------------EEEEccCCccCCCcEEEECCCCC-EEEEeCCC--CEEEEEECCCCC
Confidence 32 1 4568999875420 1111111 11 11233778875 55544321 238999986543
Q ss_pred CCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECC
Q 003878 395 NDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLK 438 (789)
Q Consensus 395 ~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~ 438 (789)
. ...+..+.......++++.+++.++++ ..++ .|.+|+..
T Consensus 240 ~-~~~~~~~~~~~~~~~i~~~~~g~l~vs-~~~~--~v~v~~~~ 279 (286)
T 1q7f_A 240 L-ISALESKVKHAQCFDVALMDDGSVVLA-SKDY--RLYIYRYV 279 (286)
T ss_dssp E-EEEEEESSCCSCEEEEEEETTTEEEEE-ETTT--EEEEEECS
T ss_pred E-EEEEcccCCCCcceeEEECCCCcEEEE-CCCC--eEEEEEcc
Confidence 2 333333332234567888887788877 4443 78888875
No 479
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.07 E-value=0.054 Score=55.27 Aligned_cols=155 Identities=10% Similarity=-0.092 Sum_probs=92.1
Q ss_pred EEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCC
Q 003878 302 IFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDA 381 (789)
Q Consensus 302 ~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~ 381 (789)
..++.+++|| .|++++... ..+.|.++|+++++ ....+.-+....-.-+..+|++||+++..
T Consensus 23 ~~Gl~~~~dg-~Lyvstg~~--~~s~v~~iD~~tg~-------------v~~~i~l~~~~fgeGi~~~g~~lyv~t~~-- 84 (266)
T 2iwa_A 23 TQGLVYAEND-TLFESTGLY--GRSSVRQVALQTGK-------------VENIHKMDDSYFGEGLTLLNEKLYQVVWL-- 84 (266)
T ss_dssp EEEEEECSTT-EEEEEECST--TTCEEEEEETTTCC-------------EEEEEECCTTCCEEEEEEETTEEEEEETT--
T ss_pred cccEEEeCCC-eEEEECCCC--CCCEEEEEECCCCC-------------EEEEEecCCCcceEEEEEeCCEEEEEEec--
Confidence 3578899996 666654322 24779999999863 11111111111112245568899988765
Q ss_pred CCceEEEEECCCCCCeEEeccCC-CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccCC-----eeEEE
Q 003878 382 PKYKIIRVDLKEPNDWFEVIPEA-ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEI-----GSVNA 455 (789)
Q Consensus 382 ~~~~L~~~dl~~~~~~~~l~~~~-~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~-----~~v~~ 455 (789)
...+.++|.++.+.... ++.. +.. -+++..+ ++++++ ++..+|+++|.++.+..+.+.... .....
T Consensus 85 -~~~v~viD~~t~~v~~~-i~~g~~~g--~glt~Dg-~~l~vs---~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~ne 156 (266)
T 2iwa_A 85 -KNIGFIYDRRTLSNIKN-FTHQMKDG--WGLATDG-KILYGS---DGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNE 156 (266)
T ss_dssp -CSEEEEEETTTTEEEEE-EECCSSSC--CEEEECS-SSEEEE---CSSSEEEEECTTTCCEEEEEECEETTEECCCEEE
T ss_pred -CCEEEEEECCCCcEEEE-EECCCCCe--EEEEECC-CEEEEE---CCCCeEEEEECCCCcEEEEEEECCCCccccccee
Confidence 36799999988753333 3322 211 2344433 567654 245699999999887766665431 12334
Q ss_pred eecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 456 ISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 456 ~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
+.+. ++ .++... ....++.++|+++++
T Consensus 157 le~~-dg-~lyvn~---~~~~~V~vID~~tg~ 183 (266)
T 2iwa_A 157 LEYI-NG-EVWANI---WQTDCIARISAKDGT 183 (266)
T ss_dssp EEEE-TT-EEEEEE---TTSSEEEEEETTTCC
T ss_pred EEEE-CC-EEEEec---CCCCeEEEEECCCCc
Confidence 4444 44 566432 235699999999996
No 480
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.05 E-value=0.14 Score=60.87 Aligned_cols=199 Identities=12% Similarity=0.024 Sum_probs=112.9
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCC--CCcEEEEe-cCCCCeeEEEEEEecCCcEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQ--SEDILCWK-DPEHPKYIFSGHVTEDGQYL 314 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~--~~~~~~~~-~~~~~~~~~~~~~SpDG~~l 314 (789)
.+++|.+.+..||++.. ...+|++..+.... .....+.. ....+ .++++.+.++.|
T Consensus 427 ~gl~~d~~~~~lY~sD~------------------~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P---~GLAvD~~~~~L 485 (791)
T 3m0c_C 427 VALDTEVASNRIYWSDL------------------SQRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNI 485 (791)
T ss_dssp EEEEEETTTTEEEEEET------------------TTTEEEEEEC--------CEEEECSSCSCC---CEEEEETTTTEE
T ss_pred EEEeecccCCeeEEeec------------------cceeEEEEeccCCCCCcceeEEEecCCCCc---ceeeeeecCCcE
Confidence 57888888888888732 23468888876421 12233333 22222 367888899988
Q ss_pred EEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-ccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECC
Q 003878 315 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK 392 (789)
Q Consensus 315 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~ 392 (789)
++.-.. ...|+++++++.. ...+.. ... ..-.++.|.++.||+.-.. ...+|.+++++
T Consensus 486 Y~tD~~----~~~I~v~~ldG~~--------------~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g--~~~~I~~~~~d 545 (791)
T 3m0c_C 486 YWTDSV----LGTVSVADTKGVK--------------RKTLFRENGSKPRAIVVDPVHGFMYWTDWG--TPAKIKKGGLN 545 (791)
T ss_dssp EEEETT----TTEEEEEETTSSS--------------EEEEEECTTCCEEEEEEETTTTEEEEEECS--SSCEEEEEETT
T ss_pred EEEecC----CCeEEEEeCCCCe--------------EEEEEeCCCCCcceEEEecCCCCEEEecCC--CCCeEEEEecC
Confidence 876422 4679999987631 222222 221 1122367777888875432 23689999998
Q ss_pred CCCCeEEeccCCCCceeeeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceeeecccC---CeeEEEeecccCCcEEEEE
Q 003878 393 EPNDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE---IGSVNAISARREDSVVFIS 468 (789)
Q Consensus 393 ~~~~~~~l~~~~~~~~i~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~---~~~v~~~s~s~d~~~l~~~ 468 (789)
+.. .+.++... -..-.++++.. +++||++-. +...|++++++ |...+.+... .....+++. +++.||++
T Consensus 546 G~~-~~~lv~~~-l~~P~GLavD~~~~~LYwaD~--~~~~I~~~d~d-G~~~~~v~~~~~~l~~P~glav--~~~~lYwt 618 (791)
T 3m0c_C 546 GVD-IYSLVTEN-IQWPNGITLDLLSGRLYWVDS--KLHSISSIDVN-GGNRKTILEDEKRLAHPFSLAV--FEDKVFWT 618 (791)
T ss_dssp SCC-EEEEECSS-CSCEEEEEEETTTTEEEEEET--TTTEEEEEETT-SCSCEEEEECTTTTSSEEEEEE--ETTEEEEE
T ss_pred CCc-eEEEEeCC-CCCceEEEEecCCCeEEEEeC--CCCcEEEEecC-CCceEEEecCCCccCCCCEEEE--eCCEEEEE
Confidence 765 44555433 23456788874 467777643 33589999997 5433333211 111123333 34556654
Q ss_pred EcCCCCCcEEEEEECCCCC
Q 003878 469 FTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 469 ~ss~~~P~~ly~~dl~tg~ 487 (789)
= ..-..|+++|..+|+
T Consensus 619 D---~~~~~I~~~dk~tG~ 634 (791)
T 3m0c_C 619 D---IINEAIFSANRLTGS 634 (791)
T ss_dssp E---TTTTEEEEEETTTCC
T ss_pred E---CCCCEEEEEeCCCCc
Confidence 2 234677888766664
No 481
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=97.04 E-value=0.25 Score=50.18 Aligned_cols=187 Identities=12% Similarity=0.052 Sum_probs=98.7
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++..++|+ ++++.. ....|++++.. + ....+..+........+.++++|+ |++.
T Consensus 107 ~~i~~~~~g~-l~v~~~------------------~~~~i~~~~~~-g---~~~~~~~~~~~~~~~~i~~d~~g~-l~v~ 162 (300)
T 2qc5_A 107 YGITEGLNGD-IWFTQL------------------NGDRIGKLTAD-G---TIYEYDLPNKGSYPAFITLGSDNA-LWFT 162 (300)
T ss_dssp EEEEECSTTC-EEEEET------------------TTTEEEEECTT-S---CEEEEECSSTTCCEEEEEECTTSS-EEEE
T ss_pred ccceECCCCC-EEEEcc------------------CCCeEEEECCC-C---CEEEccCCCCCCCceeEEECCCCC-EEEE
Confidence 5677788875 555432 12346666654 2 122222221122345788899998 5544
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee--cccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI--DGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 394 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~--~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~ 394 (789)
.. . ...|++++. ++. ..... .... .....++++|. +|+.+.. ...|++++. ++
T Consensus 163 ~~-~---~~~i~~~~~-~g~--------------~~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~---~~~i~~~~~-~g 218 (300)
T 2qc5_A 163 EN-Q---NNSIGRITN-TGK--------------LEEYPLPTNAAAPVGITSGNDGA-LWFVEIM---GNKIGRITT-TG 218 (300)
T ss_dssp ET-T---TTEEEEECT-TCC--------------EEEEECSSTTCCEEEEEECTTSS-EEEEETT---TTEEEEECT-TC
T ss_pred ec-C---CCeEEEECC-CCc--------------EEEeeCCCCCCCcceEEECCCCC-EEEEccC---CCEEEEEcC-CC
Confidence 32 1 356888887 321 11111 1111 11123566764 6665433 357999998 34
Q ss_pred CCeEEe-ccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC--CeeEEEeecccCCcEEEEEEcC
Q 003878 395 NDWFEV-IPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE--IGSVNAISARREDSVVFISFTS 471 (789)
Q Consensus 395 ~~~~~l-~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~--~~~v~~~s~s~d~~~l~~~~ss 471 (789)
. ...+ ++.. .....++.+.+++.+++....+ ..|.+++.+ |+. ..+..+ ...+..+..++++. ++++ +
T Consensus 219 ~-~~~~~~~~~-~~~~~~i~~d~~g~l~v~~~~~--~~i~~~~~~-g~~-~~~~~~~~~~~~~~i~~~~~g~-l~v~--~ 289 (300)
T 2qc5_A 219 E-ISEYDIPTP-NARPHAITAGKNSEIWFTEWGA--NQIGRITND-NTI-QEYQLQTENAEPHGITFGKDGS-VWFA--L 289 (300)
T ss_dssp C-EEEEECSST-TCCEEEEEECSTTCEEEEETTT--TEEEEECTT-SCE-EEEECCSTTCCCCCEEECTTSC-EEEE--C
T ss_pred c-EEEEECCCC-CCCceEEEECCCCCEEEeccCC--CeEEEECCC-CcE-EEEECCccCCccceeEeCCCCC-EEEE--c
Confidence 3 3333 2322 2445678887766777765433 378899984 654 333222 23344556667766 5554 2
Q ss_pred CCCCcEEEEEECC
Q 003878 472 FLIPGIVYQCNLK 484 (789)
Q Consensus 472 ~~~P~~ly~~dl~ 484 (789)
. . .++++|+.
T Consensus 290 ~-~--~i~~~~p~ 299 (300)
T 2qc5_A 290 K-C--KIGKLNLN 299 (300)
T ss_dssp S-S--EEEEEEEC
T ss_pred c-C--ceEEeCCC
Confidence 2 2 88888753
No 482
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.04 E-value=0.43 Score=52.11 Aligned_cols=206 Identities=12% Similarity=0.046 Sum_probs=105.9
Q ss_pred EE--eCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecC-------CCCeeEEEEEEecCCc
Q 003878 242 WT--HDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDP-------EHPKYIFSGHVTEDGQ 312 (789)
Q Consensus 242 ws--pDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~-------~~~~~~~~~~~SpDG~ 312 (789)
++ +|+++|+.. ..+..+|++.+..+...+..++-.-. -.-..-..+..+|||
T Consensus 89 ~~~~~~r~~l~v~------------------~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG- 149 (462)
T 2ece_A 89 GKPNIERRFLIVP------------------GLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA- 149 (462)
T ss_dssp CCTTCCSCEEEEE------------------BTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-
T ss_pred cCCCccCCEEEEc------------------cCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-
Confidence 37 899999876 33445699999887655443322110 000122346789999
Q ss_pred EEEEEEEcC--CCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc---ceeEE-EecCCCEEEEEECCC------
Q 003878 313 YLVMCIEEN--CDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD---AQYEV-IANDDTVFTFLTNKD------ 380 (789)
Q Consensus 313 ~l~~~~~~~--~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~---~~~~~-~s~dG~~l~~~tn~~------ 380 (789)
|+++.... ......+.++|.++.+ .......+.. ..|.+ |+|+++.++ .++-+
T Consensus 150 -i~Vs~~g~~~g~~~g~v~vlD~~T~~-------------v~~~~~~~~~~~~~~Yd~~~~p~~~~mv-sS~wg~p~~~~ 214 (462)
T 2ece_A 150 -IYISALGNEEGEGPGGILMLDHYSFE-------------PLGKWEIDRGDQYLAYDFWWNLPNEVLV-SSEWAVPNTIE 214 (462)
T ss_dssp -EEEEEEEETTSCSCCEEEEECTTTCC-------------EEEECCSBCTTCCCCCCEEEETTTTEEE-ECBCCCHHHHT
T ss_pred -EEEEcCCCcCCCCCCeEEEEECCCCe-------------EEEEEccCCCCccccceEEECCCCCEEE-EccCcCccccc
Confidence 55544332 1224679999998742 0111111111 12323 689998554 45411
Q ss_pred ----------CCCceEEEEECCCCCCeEEeccCCCCceeeeEEE--ecCCEEEEEEEe----CCeEEEEEEECCCCce--
Q 003878 381 ----------APKYKIIRVDLKEPNDWFEVIPEAERDVLESATA--VNLNQMIVSYLS----DVKYVLQIRDLKNGSL-- 442 (789)
Q Consensus 381 ----------~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~--~~~~~lv~~~~~----~g~~~L~~~dl~tG~~-- 442 (789)
....+|..+|+++++...++-...+...-..+.+ ++++..++...+ +-.+.|+++..+.|+.
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~ 294 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNA 294 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeE
Confidence 1247899999987642223222211122233444 554443333333 1223555444333321
Q ss_pred eeecccC------------------CeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECC
Q 003878 443 LHQLPIE------------------IGSVNAISARREDSVVFISFTSFLIPGIVYQCNLK 484 (789)
Q Consensus 443 ~~~l~~~------------------~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~ 484 (789)
.+.+..+ ......+..++|++.|+++-. ....|..||+.
T Consensus 295 ~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnr---g~d~VavfdV~ 351 (462)
T 2ece_A 295 EKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLW---GIGEVRQYDIS 351 (462)
T ss_dssp EEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEET---TTTEEEEEECS
T ss_pred EEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeC---CCCEEEEEEec
Confidence 1111010 122345668899999887643 34789999975
No 483
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.88 E-value=0.23 Score=51.75 Aligned_cols=157 Identities=15% Similarity=0.129 Sum_probs=86.2
Q ss_pred EEEEEEec-CCcEEEEEEEcC-------------CCCceEEEEEECCCCCCCcccccccCCCCccEeeecccc-ceeEEE
Q 003878 302 IFSGHVTE-DGQYLVMCIEEN-------------CDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFD-AQYEVI 366 (789)
Q Consensus 302 ~~~~~~Sp-DG~~l~~~~~~~-------------~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~ 366 (789)
...+.+++ ||+ |++..... ......|+.++.+++. ...+..... ..-..+
T Consensus 128 p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~--------------~~~~~~~~~~p~gia~ 192 (322)
T 2fp8_A 128 LYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKE--------------TTLLLKELHVPGGAEV 192 (322)
T ss_dssp EEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTE--------------EEEEEEEESCCCEEEE
T ss_pred cceEEEecCCCE-EEEECCcccccccccceehcccCCCceEEEEeCCCCE--------------EEEeccCCccCcceEE
Confidence 34678899 885 44443221 0123679999987642 111111111 112348
Q ss_pred ecCCCEEEEEECCCCCCceEEEEECCCCC--CeEEeccCCCCceeeeEEEecCCEEEEEEEe--------CCeEEEEEEE
Q 003878 367 ANDDTVFTFLTNKDAPKYKIIRVDLKEPN--DWFEVIPEAERDVLESATAVNLNQMIVSYLS--------DVKYVLQIRD 436 (789)
Q Consensus 367 s~dG~~l~~~tn~~~~~~~L~~~dl~~~~--~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~--------~g~~~L~~~d 436 (789)
++||+.||+... .+.+|+++++++.. ..+.+. ..+ . ..++.+.+++.+++.... .....|.+++
T Consensus 193 ~~dg~~lyv~d~---~~~~I~~~~~~~~~~~~~~~~~-~~~-g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d 266 (322)
T 2fp8_A 193 SADSSFVLVAEF---LSHQIVKYWLEGPKKGTAEVLV-KIP-N-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFD 266 (322)
T ss_dssp CTTSSEEEEEEG---GGTEEEEEESSSTTTTCEEEEE-ECS-S-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEEC
T ss_pred CCCCCEEEEEeC---CCCeEEEEECCCCcCCccceEE-eCC-C-CCCeEECCCCCEEEEecCcccccccCCCccEEEEEC
Confidence 899998887543 24689999987632 233322 121 2 466778776677776654 2245789999
Q ss_pred CCCCceeeecccCCe----eEEEeecccCCcEEEEEEcCCCCCcEEEEEECCC
Q 003878 437 LKNGSLLHQLPIEIG----SVNAISARREDSVVFISFTSFLIPGIVYQCNLKT 485 (789)
Q Consensus 437 l~tG~~~~~l~~~~~----~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~t 485 (789)
.+ |+..+.+..+.+ .+..+.. ++..|+++- .....|.+++++.
T Consensus 267 ~~-G~~~~~~~~~~g~~~~~~~~~~~--~~g~L~v~~---~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 267 EF-GNILEVIPLPPPFAGEHFEQIQE--HDGLLYIGT---LFHGSVGILVYDK 313 (322)
T ss_dssp TT-SCEEEEEECCTTTTTSCCCEEEE--ETTEEEEEC---SSCSEEEEEEC--
T ss_pred CC-CCEEEEEECCCCCccccceEEEE--eCCEEEEee---cCCCceEEEeccc
Confidence 86 776555554421 1222222 245566542 2345777777643
No 484
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.83 E-value=0.17 Score=55.55 Aligned_cols=121 Identities=12% Similarity=0.055 Sum_probs=64.1
Q ss_pred cceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEE
Q 003878 237 FSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 237 ~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~ 316 (789)
...++|++||+.||++.... ......++.............+ ..-.++. +++++|++.+|++
T Consensus 181 P~~ia~d~~G~~lyvad~~~--------------~~~~~~v~~~~~~g~~~~~~~l-~~~~~p~---giavdp~~g~lyv 242 (430)
T 3tc9_A 181 VRTICWTHEADSMIITNDQN--------------NNDRPNNYILTRESGFKVITEL-TKGQNCN---GAETHPINGELYF 242 (430)
T ss_dssp EEEEEECTTSSEEEEEECCS--------------CTTSEEEEEEEGGGTSCSEEEE-EECSSCC---CEEECTTTCCEEE
T ss_pred cceEEEeCCCCEEEEEeCCC--------------CcccceEEEEeCCCceeeeeee-ccCCCce---EEEEeCCCCEEEE
Confidence 36799999999888875421 0111234444332221111122 2222232 4678996556666
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccceeEEEecCCCEEEEEECCCCCCceEEEEECCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKE 393 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~ 393 (789)
.... ..+|+.++.+++. ...+.............++|+|++||+... .+.+|++++.++
T Consensus 243 ~d~~----~~~V~~~~~~~~~-----------~~~~~~~~~~~~P~gia~~pdG~~lyv~d~---~~~~I~~~~~d~ 301 (430)
T 3tc9_A 243 NSWN----AGQVFRYDFTTQE-----------TTPLFTIQDSGWEFHIQFHPSGNYAYIVVV---NQHYILRSDYDW 301 (430)
T ss_dssp EETT----TTEEEEEETTTTE-----------EEEEEECSSSSCCEEEEECTTSSEEEEEET---TTTEEEEEEEET
T ss_pred EECC----CCEEEEEECCCCc-----------EEEEEEcCCCCcceeEEEcCCCCEEEEEEC---CCCEEEEEeCCc
Confidence 5422 4679999987631 000111111111233458999998887643 346888887654
No 485
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=96.80 E-value=0.0039 Score=63.00 Aligned_cols=145 Identities=14% Similarity=0.070 Sum_probs=83.8
Q ss_pred EEEEEecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCC-CCCH----------------HHHHHHHcCCeEE
Q 003878 509 HQVFVPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTP-SFSV----------------SRTILMRHLGAVF 571 (789)
Q Consensus 509 ~~~~~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~-~~~~----------------~~~~~l~~~G~~v 571 (789)
--+.+....| ..+-.|++..+. . ....|++|+++||||.+... .+.. ...+|. +-..+
T Consensus 22 Gy~~v~~~~~-~~lFywf~es~~-~-~~~~Pl~lwlnGGPGcSS~~~g~~~E~GP~~v~~~~~~l~~N~~sW~--~~anv 96 (255)
T 1whs_A 22 GYITVDEGAG-RSLFYLLQEAPE-D-AQPAPLVLWLNGGPGCSSVAYGASEELGAFRVKPRGAGLVLNEYRWN--KVANV 96 (255)
T ss_dssp EEEEEETTTT-EEEEEEEECCCG-G-GCSCCEEEEECCTTTBCTTTTHHHHTSSSEEECGGGCCEEECTTCGG--GTSEE
T ss_pred EEEECCCCCC-cEEEEEEEEecC-C-CCCCCEEEEECCCCchHHHHHHHHhccCCeEecCCCCeeeeCccccc--ccCCE
Confidence 3455655567 788777665442 2 35689999999999987654 2100 001222 24568
Q ss_pred EEEeecCCCCCChhHHhccc-ccCCcchHHHHHHHHHHHHH-cCCCCCCcEEEEeeChHHHHHHHHHHh----C-C-Cce
Q 003878 572 CIANIRGGGEYGEEWHKGGA-LAKKQNCFDDFISASEYLIS-AGYTQSRKLCIEGGSNGGLLVGACINQ----R-P-DLF 643 (789)
Q Consensus 572 ~~~~~RG~g~~g~~~~~~~~-~~~~~~~~~D~~~~~~~L~~-~~~~d~~~i~i~G~S~GG~l~~~~~~~----~-p-d~f 643 (789)
+.+|..-|.+|...-..... ......+.+|+...++...+ ......+++.|.|.|+||..+-.++.. . + =.+
T Consensus 97 lfiDqPvGtGfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~yi~GESYgG~yvp~la~~i~~~n~~~inL 176 (255)
T 1whs_A 97 LFLDSPAGVGFSYTNTSSDIYTSGDNRTAHDSYAFLAKWFERFPHYKYRDFYIAGESYAGHYVPELSQLVHRSKNPVINL 176 (255)
T ss_dssp EEECCSTTSTTCEESSGGGGGSCCHHHHHHHHHHHHHHHHHHCGGGTTCEEEEEEEETHHHHHHHHHHHHHHHTCSSCEE
T ss_pred EEEecCCCCccCCCcCccccccCCHHHHHHHHHHHHHHHHHhCHHhcCCCEEEEecCCccccHHHHHHHHHHcCCccccc
Confidence 88885434444321111110 01112334566555554333 333345689999999999887665532 1 1 357
Q ss_pred eEEEecCCccccccc
Q 003878 644 GCALAHVGVMDMLRY 658 (789)
Q Consensus 644 ~a~v~~~p~~d~~~~ 658 (789)
++++...|++|....
T Consensus 177 kGi~ign~~~d~~~~ 191 (255)
T 1whs_A 177 KGFMVGNGLIDDYHD 191 (255)
T ss_dssp EEEEEEEECCBHHHH
T ss_pred ceEEecCCccCHHHh
Confidence 999999999986543
No 486
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.78 E-value=0.17 Score=51.09 Aligned_cols=155 Identities=13% Similarity=0.093 Sum_probs=92.9
Q ss_pred eeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEecCCCEEEEEEC
Q 003878 300 KYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTN 378 (789)
Q Consensus 300 ~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dG~~l~~~tn 378 (789)
.+..++.++ |+ .|+.+..... .+.|.++|+++++ ....+.-+. ..+ .-+.++|++||+++.
T Consensus 43 ~ftqGL~~~-~~-~LyestG~~g--~S~v~~vD~~Tgk-------------v~~~~~l~~-~~FgeGit~~g~~ly~ltw 104 (262)
T 3nol_A 43 AFTEGFFYR-NG-YFYESTGLNG--RSSIRKVDIESGK-------------TLQQIELGK-RYFGEGISDWKDKIVGLTW 104 (262)
T ss_dssp CEEEEEEEE-TT-EEEEEEEETT--EEEEEEECTTTCC-------------EEEEEECCT-TCCEEEEEEETTEEEEEES
T ss_pred cccceEEEE-CC-EEEEECCCCC--CceEEEEECCCCc-------------EEEEEecCC-ccceeEEEEeCCEEEEEEe
Confidence 344577887 55 6776664433 5789999999863 111111111 111 124567899999877
Q ss_pred CCCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-----CeeE
Q 003878 379 KDAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-----IGSV 453 (789)
Q Consensus 379 ~~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~-----~~~v 453 (789)
++ ..++++|.++.+...++ +..... -+++... ++|+++ ++..+|+++|.++.+....++.. ...+
T Consensus 105 ~~---~~v~v~D~~t~~~~~ti-~~~~eG--~glt~dg-~~L~~S---dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~l 174 (262)
T 3nol_A 105 KN---GLGFVWNIRNLRQVRSF-NYDGEG--WGLTHND-QYLIMS---DGTPVLRFLDPESLTPVRTITVTAHGEELPEL 174 (262)
T ss_dssp SS---SEEEEEETTTCCEEEEE-ECSSCC--CCEEECS-SCEEEC---CSSSEEEEECTTTCSEEEEEECEETTEECCCE
T ss_pred eC---CEEEEEECccCcEEEEE-ECCCCc--eEEecCC-CEEEEE---CCCCeEEEEcCCCCeEEEEEEeccCCcccccc
Confidence 53 68999999987733333 322111 1344333 556654 34568999999988876776553 1223
Q ss_pred EEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 454 NAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 454 ~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
..+.+. ++ .++.. .+ ....|+++|+++|+
T Consensus 175 NELe~~-~G-~lyan--~w-~~~~I~vIDp~tG~ 203 (262)
T 3nol_A 175 NELEWV-DG-EIFAN--VW-QTNKIVRIDPETGK 203 (262)
T ss_dssp EEEEEE-TT-EEEEE--ET-TSSEEEEECTTTCB
T ss_pred ceeEEE-CC-EEEEE--Ec-cCCeEEEEECCCCc
Confidence 334443 44 56643 22 35699999999996
No 487
>1ivy_A Human protective protein; carboxypeptidase, serine carboxypeptidase, protective protei glycoprotein, zymogen; HET: NAG NDG; 2.20A {Homo sapiens} SCOP: c.69.1.5
Probab=96.72 E-value=0.0029 Score=69.96 Aligned_cols=134 Identities=13% Similarity=0.118 Sum_probs=77.2
Q ss_pred EecCCCceEEEEEEEecCCCCCCCCccEEEEEcCCCCccCCCCCCH----------------HHHHHHHcCCeEEEEEee
Q 003878 513 VPSKDGSTKIPMFIVSKKNIKLDGSHPCLLYGYGGFNISVTPSFSV----------------SRTILMRHLGAVFCIANI 576 (789)
Q Consensus 513 ~~s~dg~~~i~~~l~~p~~~~~~~~~P~ll~~hGg~~~~~~~~~~~----------------~~~~~l~~~G~~v~~~~~ 576 (789)
++-.++ ..+-.|++.... . ....|++|++|||||.+....+.. .-..|. +-..++.+|.
T Consensus 26 v~v~~~-~~lfy~f~~s~~-~-~~~~Pl~lwlnGGPG~Ss~~g~~~e~GP~~~~~~~~~l~~n~~sw~--~~~~~lfiDq 100 (452)
T 1ivy_A 26 LKSSGS-KHLHYWFVESQK-D-PENSPVVLWLNGGPGCSSLDGLLTEHGPFLVQPDGVTLEYNPYSWN--LIANVLYLES 100 (452)
T ss_dssp EECSTT-EEEEEEEECCSS-C-GGGSCEEEEECCTTTBCTHHHHHTTTSSEEECTTSSCEEECTTCGG--GSSEEEEECC
T ss_pred EeeCCC-CeEEEEEEEcCC-C-CCCCCEEEEECCCCcHHHHHHHHHhcCCcEEeCCCceeeeCCCccc--ccccEEEEec
Confidence 444567 788777664432 1 246799999999999764311000 001122 3457888885
Q ss_pred -cCCCCCChhHHhcccccCC---cchHHHHHHH-HHHHHHcCCCCCCcEEEEeeChHHHHHHHHHH----hCCCceeEEE
Q 003878 577 -RGGGEYGEEWHKGGALAKK---QNCFDDFISA-SEYLISAGYTQSRKLCIEGGSNGGLLVGACIN----QRPDLFGCAL 647 (789)
Q Consensus 577 -RG~g~~g~~~~~~~~~~~~---~~~~~D~~~~-~~~L~~~~~~d~~~i~i~G~S~GG~l~~~~~~----~~pd~f~a~v 647 (789)
+|.| |... .. .... ....+|+... .+|+........+++.|.|.|+||..+-.++. ..+-.+++++
T Consensus 101 P~GtG-fS~~--~~--~~~~~~~~~~a~~~~~~l~~f~~~~p~~~~~~~~i~GeSYgG~y~p~la~~i~~~~~~~l~g~~ 175 (452)
T 1ivy_A 101 PAGVG-FSYS--DD--KFYATNDTEVAQSNFEALQDFFRLFPEYKNNKLFLTGESYAGIYIPTLAVLVMQDPSMNLQGLA 175 (452)
T ss_dssp STTST-TCEE--SS--CCCCCBHHHHHHHHHHHHHHHHHHSGGGTTSCEEEEEETTHHHHHHHHHHHHTTCTTSCEEEEE
T ss_pred CCCCC-cCCc--CC--CCCcCCcHHHHHHHHHHHHHHHHhcHHhcCCCEEEEeeccceeehHHHHHHHHhcCccccceEE
Confidence 5544 3321 11 1111 1233444443 44454432334578999999999995444333 3355789999
Q ss_pred ecCCccccc
Q 003878 648 AHVGVMDML 656 (789)
Q Consensus 648 ~~~p~~d~~ 656 (789)
+..|++|..
T Consensus 176 ign~~~d~~ 184 (452)
T 1ivy_A 176 VGNGLSSYE 184 (452)
T ss_dssp EESCCSBHH
T ss_pred ecCCccChh
Confidence 999988753
No 488
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.69 E-value=0.23 Score=49.73 Aligned_cols=150 Identities=16% Similarity=0.124 Sum_probs=80.0
Q ss_pred EEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcC
Q 003878 242 WTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEEN 321 (789)
Q Consensus 242 wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 321 (789)
-+++++.||.. .++...+++++..+...... +..+.+ +..+++||+.|+++. +
T Consensus 70 i~~~~~~ly~l------------------tw~~~~v~v~D~~tl~~~~t--i~~~~~-----Gwglt~dg~~L~vSd--g 122 (243)
T 3mbr_X 70 IVAWRDRLIQL------------------TWRNHEGFVYDLATLTPRAR--FRYPGE-----GWALTSDDSHLYMSD--G 122 (243)
T ss_dssp EEEETTEEEEE------------------ESSSSEEEEEETTTTEEEEE--EECSSC-----CCEEEECSSCEEEEC--S
T ss_pred EEEeCCEEEEE------------------EeeCCEEEEEECCcCcEEEE--EeCCCC-----ceEEeeCCCEEEEEC--C
Confidence 35567888876 34456789998876533222 222221 234568999887652 3
Q ss_pred CCCceEEEEEECCCCCCCcccccccCCCCccEeeec-cccce-eEEEecCCCEEEEEECCCCCCceEEEEECCCCCC--e
Q 003878 322 CDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GFDAQ-YEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND--W 397 (789)
Q Consensus 322 ~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~~~~-~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~--~ 397 (789)
.+.|+++|.++... .....+.. +.... .......+..+|..... ...|.++|.++++- +
T Consensus 123 ---s~~l~~iDp~t~~~-----------~~~I~V~~~g~~~~~lNeLe~~~G~lyanvw~---s~~I~vIDp~tG~V~~~ 185 (243)
T 3mbr_X 123 ---TAVIRKLDPDTLQQ-----------VGSIKVTAGGRPLDNLNELEWVNGELLANVWL---TSRIARIDPASGKVVAW 185 (243)
T ss_dssp ---SSEEEEECTTTCCE-----------EEEEECEETTEECCCEEEEEEETTEEEEEETT---TTEEEEECTTTCBEEEE
T ss_pred ---CCeEEEEeCCCCeE-----------EEEEEEccCCcccccceeeEEeCCEEEEEECC---CCeEEEEECCCCCEEEE
Confidence 46799999887420 00111111 11000 01111123457744432 34899999998861 1
Q ss_pred EE---eccC------CCCceeeeEEEecC-CEEEEEEEeCCeEEEEEEEC
Q 003878 398 FE---VIPE------AERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDL 437 (789)
Q Consensus 398 ~~---l~~~------~~~~~i~~v~~~~~-~~lv~~~~~~g~~~L~~~dl 437 (789)
-. +.+. .....+.++++.++ ++|++.... -+.|+.+.+
T Consensus 186 idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK~--wp~~~~v~~ 233 (243)
T 3mbr_X 186 IDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGKR--WPMLYEIRL 233 (243)
T ss_dssp EECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEETT--CSEEEEEEE
T ss_pred EECCcCccccccccCCcCCceEEEEEcCCCCEEEEECCC--CCcEEEEEE
Confidence 11 2221 12357889999974 566665433 246666554
No 489
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.57 E-value=0.87 Score=52.52 Aligned_cols=157 Identities=11% Similarity=0.053 Sum_probs=97.4
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++..+.++.||++-. ...+|.+.++..... .+++...-.. -.++++.|...+|+++
T Consensus 83 ~GlAvD~~~~~LY~tD~------------------~~~~I~v~~~dG~~~-~~l~~~~l~~---P~~iavdp~~G~lY~t 140 (628)
T 4a0p_A 83 EGMAVDWLGKNLYWADT------------------GTNRIEVSKLDGQHR-QVLVWKDLDS---PRALALDPAEGFMYWT 140 (628)
T ss_dssp CEEEEETTTTEEEEEET------------------TTTEEEEEETTSTTC-EEEECSSCCC---EEEEEEETTTTEEEEE
T ss_pred ceEEEEeCCCEEEEEEC------------------CCCEEEEEecCCCcE-EEEEeCCCCC---cccEEEccCCCeEEEe
Confidence 56777778889988732 234688888865432 2333222222 3478899988888876
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeeccccc-eeEEEecCCCEEEEEECCCCCCceEEEEECCCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPND 396 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~ 396 (789)
-.. ....|+.+++++.. ...+..+... .--.++++++.||+.-. ...+|.++++++..
T Consensus 141 D~g---~~~~I~r~~~dG~~--------------~~~l~~~~~~P~GlalD~~~~~LY~aD~---~~~~I~~~d~dG~~- 199 (628)
T 4a0p_A 141 EWG---GKPKIDRAAMDGSE--------------RTTLVPNVGRANGLTIDYAKRRLYWTDL---DTNLIESSNMLGLN- 199 (628)
T ss_dssp ECS---SSCEEEEEETTSCS--------------CEEEECSCSSEEEEEEETTTTEEEEEET---TTTEEEEEETTSCS-
T ss_pred CCC---CCCEEEEEeCCCCc--------------eEEEECCCCCcceEEEccccCEEEEEEC---CCCEEEEEcCCCCc-
Confidence 432 14679999987631 2223332211 11237788899998643 35789999998765
Q ss_pred eEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCce
Q 003878 397 WFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSL 442 (789)
Q Consensus 397 ~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~ 442 (789)
. +++.... ..-.+++++. +++|++-..++ .|+++|..+|+.
T Consensus 200 ~-~v~~~~l-~~P~glav~~-~~ly~tD~~~~--~I~~~dk~tg~~ 240 (628)
T 4a0p_A 200 R-EVIADDL-PHPFGLTQYQ-DYIYWTDWSRR--SIERANKTSGQN 240 (628)
T ss_dssp C-EEEEECC-SCEEEEEEET-TEEEEEETTTT--EEEEEETTTCCS
T ss_pred e-EEeeccC-CCceEEEEEC-CEEEEecCCCC--EEEEEECCCCCc
Confidence 2 3443332 2345788887 78887654443 788999877764
No 490
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.42 E-value=0.63 Score=47.74 Aligned_cols=195 Identities=10% Similarity=0.000 Sum_probs=97.4
Q ss_pred ccEEEEEECCCCCCC-cEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCcc
Q 003878 274 YHEFYYHFLGTKQSE-DILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPF 352 (789)
Q Consensus 274 ~~~i~~~~lg~~~~~-~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 352 (789)
...++++++.+.... =..+...+. +....... .-+++..++.........++++++|+.+.. |
T Consensus 77 ~~~~~~~d~~~~~~~~W~~~~~~p~-~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--------------W 140 (301)
T 2vpj_A 77 LSSVECLDYTADEDGVWYSVAPMNV-RRGLAGAT-TLGDMIYVSGGFDGSRRHTSMERYDPNIDQ--------------W 140 (301)
T ss_dssp CCCEEEEETTCCTTCCCEEECCCSS-CCBSCEEE-EETTEEEEECCBCSSCBCCEEEEEETTTTE--------------E
T ss_pred CceEEEEECCCCCCCeeEECCCCCC-CccceeEE-EECCEEEEEcccCCCcccceEEEEcCCCCe--------------E
Confidence 345888888765410 111211121 11111222 236655555433332235789999987732 3
Q ss_pred Eeeecc--ccceeEEEecCCCEEEEEECCCC--CCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCC
Q 003878 353 VKLIDG--FDAQYEVIANDDTVFTFLTNKDA--PKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDV 428 (789)
Q Consensus 353 ~~l~~~--~~~~~~~~s~dG~~l~~~tn~~~--~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g 428 (789)
..+... .......... ++.||+....+. ....++.+|+.+.. |+.+-+......-..+...+ +.+++..-.++
T Consensus 141 ~~~~~~p~~r~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~~~~-~~i~v~GG~~~ 217 (301)
T 2vpj_A 141 SMLGDMQTAREGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTGH-WTNVTPMATKRSGAGVALLN-DHIYVVGGFDG 217 (301)
T ss_dssp EEEEECSSCCBSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTTE-EEEECCCSSCCBSCEEEEET-TEEEEECCBCS
T ss_pred EECCCCCCCcccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCCc-EEeCCCCCcccccceEEEEC-CEEEEEeCCCC
Confidence 222110 0011122222 456777654322 24679999998876 88774332222223344444 78887765443
Q ss_pred ---eEEEEEEECCCCceeeecc-cC--CeeEEEeecccCCcEEEEEEcCCC---CCcEEEEEECCCCCceEEEee
Q 003878 429 ---KYVLQIRDLKNGSLLHQLP-IE--IGSVNAISARREDSVVFISFTSFL---IPGIVYQCNLKTETPEMKIFR 494 (789)
Q Consensus 429 ---~~~L~~~dl~tG~~~~~l~-~~--~~~v~~~s~s~d~~~l~~~~ss~~---~P~~ly~~dl~tg~~~~~~l~ 494 (789)
...++++|+++++. +.+. .| ........ .++ .+++. .+.. .-..++.||+.++ +.+.+.
T Consensus 218 ~~~~~~v~~yd~~~~~W-~~~~~~p~~r~~~~~~~--~~~-~i~v~-GG~~~~~~~~~v~~yd~~~~--~W~~~~ 285 (301)
T 2vpj_A 218 TAHLSSVEAYNIRTDSW-TTVTSMTTPRCYVGATV--LRG-RLYAI-AGYDGNSLLSSIECYDPIID--SWEVVT 285 (301)
T ss_dssp SSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE--ETT-EEEEE-CCBCSSSBEEEEEEEETTTT--EEEEEE
T ss_pred CcccceEEEEeCCCCcE-EECCCCCCcccceeEEE--ECC-EEEEE-cCcCCCcccccEEEEcCCCC--eEEEcC
Confidence 35799999987664 3433 22 21111122 133 34433 3322 2268899999887 466554
No 491
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.30 E-value=0.36 Score=53.01 Aligned_cols=70 Identities=13% Similarity=-0.085 Sum_probs=41.1
Q ss_pred EEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec--ccc-ceeEEEecCCCEEEEEECCC
Q 003878 304 SGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID--GFD-AQYEVIANDDTVFTFLTNKD 380 (789)
Q Consensus 304 ~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~--~~~-~~~~~~s~dG~~l~~~tn~~ 380 (789)
+++++|++..|++... ....|+.++.+++.. ...+.. ... .....++|+|++||+...
T Consensus 232 giavd~~~G~lyv~d~----~~~~V~~~d~~~g~~-------------~~~~~~~~~~~~~~~ia~dpdG~~LYvad~-- 292 (433)
T 4hw6_A 232 TCAVHPQNGKIYYTRY----HHAMISSYDPATGTL-------------TEEEVMMDTKGSNFHIVWHPTGDWAYIIYN-- 292 (433)
T ss_dssp CCEECTTTCCEEECBT----TCSEEEEECTTTCCE-------------EEEEEECSCCSSCEEEEECTTSSEEEEEET--
T ss_pred EEEEeCCCCeEEEEEC----CCCEEEEEECCCCeE-------------EEEEeccCCCCCcccEEEeCCCCEEEEEeC--
Confidence 4678895556665432 246799999875420 011111 111 112458999998887643
Q ss_pred CCCceEEEEECCC
Q 003878 381 APKYKIIRVDLKE 393 (789)
Q Consensus 381 ~~~~~L~~~dl~~ 393 (789)
.+.+|++++.+.
T Consensus 293 -~~~~I~~~~~d~ 304 (433)
T 4hw6_A 293 -GKHCIYRVDYNR 304 (433)
T ss_dssp -TTTEEEEEEBCT
T ss_pred -CCCEEEEEeCCC
Confidence 357899988653
No 492
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.26 E-value=2.4 Score=48.76 Aligned_cols=196 Identities=10% Similarity=0.083 Sum_probs=117.0
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecC-CCCeeEEEEEEecCCcEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDP-EHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~-~~~~~~~~~~~SpDG~~l~~ 316 (789)
.+++|.+++..||++-. ...+|++.++..... ..+.... ..+ .++++.+.++.|++
T Consensus 40 ~~l~~d~~~~~lywtD~------------------~~~~I~r~~~~g~~~--~~v~~~g~~~P---~GlAvD~~~~~LY~ 96 (628)
T 4a0p_A 40 SALDFDVTDNRIYWTDI------------------SLKTISRAFMNGSAL--EHVVEFGLDYP---EGMAVDWLGKNLYW 96 (628)
T ss_dssp EEEEEETTTTEEEEEET------------------TTTEEEEEETTSCSC--EEEECSSCSCC---CEEEEETTTTEEEE
T ss_pred EEEEEECCCCEEEEEEC------------------CCCeEEEEECCCCCc--EEEEeCCCCCc---ceEEEEeCCCEEEE
Confidence 67899999999998732 234688888865432 2333321 122 36788888888887
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-ccccc-eeEEEecCCCEEEEEECCCCCCceEEEEECCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFDA-QYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 394 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~~~~~-~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~ 394 (789)
.-.. ...|.++++++.. ...+. ..... .--.+.|.+..||+.-. + .+.+|+++++++.
T Consensus 97 tD~~----~~~I~v~~~dG~~--------------~~~l~~~~l~~P~~iavdp~~G~lY~tD~-g-~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 97 ADTG----TNRIEVSKLDGQH--------------RQVLVWKDLDSPRALALDPAEGFMYWTEW-G-GKPKIDRAAMDGS 156 (628)
T ss_dssp EETT----TTEEEEEETTSTT--------------CEEEECSSCCCEEEEEEETTTTEEEEEEC-S-SSCEEEEEETTSC
T ss_pred EECC----CCEEEEEecCCCc--------------EEEEEeCCCCCcccEEEccCCCeEEEeCC-C-CCCEEEEEeCCCC
Confidence 6421 4679999987631 11222 22211 12236776778887543 2 3579999999876
Q ss_pred CCeEEeccCCCCceeeeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCC
Q 003878 395 NDWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFL 473 (789)
Q Consensus 395 ~~~~~l~~~~~~~~i~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~ 473 (789)
. .+.++... ..-.++++.. +++||+.-... ..|++++++ |...+.+........+++.. ++.++++= .
T Consensus 157 ~-~~~l~~~~--~~P~GlalD~~~~~LY~aD~~~--~~I~~~d~d-G~~~~v~~~~l~~P~glav~--~~~ly~tD---~ 225 (628)
T 4a0p_A 157 E-RTTLVPNV--GRANGLTIDYAKRRLYWTDLDT--NLIESSNML-GLNREVIADDLPHPFGLTQY--QDYIYWTD---W 225 (628)
T ss_dssp S-CEEEECSC--SSEEEEEEETTTTEEEEEETTT--TEEEEEETT-SCSCEEEEECCSCEEEEEEE--TTEEEEEE---T
T ss_pred c-eEEEECCC--CCcceEEEccccCEEEEEECCC--CEEEEEcCC-CCceEEeeccCCCceEEEEE--CCEEEEec---C
Confidence 5 45555422 3446788886 36777765433 489999997 44323332111122244443 45676643 3
Q ss_pred CCcEEEEEECCCCC
Q 003878 474 IPGIVYQCNLKTET 487 (789)
Q Consensus 474 ~P~~ly~~dl~tg~ 487 (789)
.-..|+++|..+|+
T Consensus 226 ~~~~I~~~dk~tg~ 239 (628)
T 4a0p_A 226 SRRSIERANKTSGQ 239 (628)
T ss_dssp TTTEEEEEETTTCC
T ss_pred CCCEEEEEECCCCC
Confidence 45689999987775
No 493
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=96.26 E-value=0.2 Score=52.91 Aligned_cols=148 Identities=8% Similarity=-0.049 Sum_probs=76.0
Q ss_pred EEeEEeCCCCcEEEEEEecCCceEEEEEEEEcCCCceecccccccccccccCccceeeeeecccccccccccccccccee
Q 003878 134 LIKVSVSEDAKYLAYALSYSGSDWATIKLMRIEDQIVEADALSWVCFCFSHSFGYFFHLTISLLNVPTYKLFLYLRGIFF 213 (789)
Q Consensus 134 ~~~~~~SpDg~~la~~~~~~g~~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~ 213 (789)
+.++.++|++..+ |..+.+++....|+++|+++++... .+.....+ ... .....++++
T Consensus 122 ~~~v~vd~~~g~~-yvtd~~~~~~~~i~v~d~~~g~~~r-~~~~~~~~-~~~---------~~~~~~~g~---------- 179 (343)
T 2qe8_A 122 VNDLAVDLIHNFV-YISDPAPDDKAALIRVDLQTGLAAR-VLQGYPGI-APE---------DIDLVIDGV---------- 179 (343)
T ss_dssp CCEEEEETTTTEE-EEEECCSGGGCEEEEEETTTCCEEE-ECTTCTTT-SCC---------SCCCEETTE----------
T ss_pred cceEEEecCCCEE-EEEcCccCCCCeEEEEECCCCCEEE-EecCCCcc-ccc---------ccceeECCE----------
Confidence 4678899876654 5555433345689999999886533 11110000 000 000111221
Q ss_pred eEEEeeeccccceeeeeeecccccceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC---CC-C--
Q 003878 214 FFYLFSLVKSTIYSFWSVVSQFKFSSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT---KQ-S-- 287 (789)
Q Consensus 214 ~~~~~~s~~~g~~~l~~~~~~~~~~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~---~~-~-- 287 (789)
.+++.+.+|....|.. ...+++|||||+.||+.... ..++|+.+... .. .
T Consensus 180 --~~~~~~~~g~~~~~~~----~~~gia~s~dg~~ly~~~~~------------------~~~l~~~~~~~~~~~~~~~~ 235 (343)
T 2qe8_A 180 --PVQIGQPDGTVIRPHL----GVNGIVLDAENEWLYLSPMH------------------STSMYRIKSADLSNLQLTDA 235 (343)
T ss_dssp --ECBEECTTSCEECCCC----CEEEEEECTTSCEEEEEESS------------------CSEEEEEEHHHHTCTTCCHH
T ss_pred --EEEeccCCCceeceec----ccceeEeccCCCEEEEEeCC------------------CCeEEEEEHHHhcCCCCChh
Confidence 2233445565555532 23679999999999987432 23577765321 00 0
Q ss_pred ---CcEEEEecCCCCeeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCC
Q 003878 288 ---EDILCWKDPEHPKYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSA 335 (789)
Q Consensus 288 ---~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~ 335 (789)
...........+ .++++++||. |++.... .+.|++++.++
T Consensus 236 ~~~~~~~~~g~~g~p---dgia~d~~G~-l~va~~~----~~~V~~~d~~~ 278 (343)
T 2qe8_A 236 ELGSKIERYSEKPIC---DGISIDKDHN-IYVGDLA----HSAIGVITSAD 278 (343)
T ss_dssp HHHTTCEEEEECCSC---SCEEECTTCC-EEEEEGG----GTEEEEEETTT
T ss_pred hhhcceEecccCCCC---ceEEECCCCC-EEEEccC----CCeEEEEECCC
Confidence 011111111111 2578899986 4333321 46799999844
No 494
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.09 E-value=0.01 Score=69.76 Aligned_cols=199 Identities=13% Similarity=0.057 Sum_probs=105.3
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCC---CCCcEEEEecCCCCeeEEEEEEecCCcEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTK---QSEDILCWKDPEHPKYIFSGHVTEDGQYL 314 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~---~~~~~~~~~~~~~~~~~~~~~~SpDG~~l 314 (789)
.+++|.+++..||++.. ...+|++.++.+. .....++......+ .++++.+.++.|
T Consensus 409 ~gla~d~~~~~Ly~sD~------------------~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P---~glavD~~~g~L 467 (699)
T 1n7d_A 409 VALDTEVASNRIYWSDL------------------SQRMICSTQLDRAHGVSSYDTVISRDIQAP---DGLAVDWIHSNI 467 (699)
T ss_dssp CCCEEETTTTEEEECCT------------------TTTSBEEEESCCCCC-CCCCCBCCSCC--C---CCEECCCSSSBC
T ss_pred EEEccccccCeEEEEec------------------CCCeEEEEecCCCCCCcceEEEEeCCCCCc---ceEEEEeeCCcE
Confidence 67899998888887622 2335777777641 11111111111112 246677667777
Q ss_pred EEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeec-cc-cceeEEEecCCCEEEEEECCCCCCceEEEEECC
Q 003878 315 VMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLID-GF-DAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLK 392 (789)
Q Consensus 315 ~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~-~~-~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~ 392 (789)
++... ....|+++++++.. ...+.. +. ...-..++|+++.||+. +.+ ...+|++++++
T Consensus 468 Y~tD~----~~~~I~v~d~dg~~--------------~~~l~~~~~~~P~giavDp~~g~ly~t-d~~-~~~~I~~~~~d 527 (699)
T 1n7d_A 468 YWTDS----VLGTVSVADTKGVK--------------RKTLFREQGSKPRAIVVDPVHGFMYWT-DWG-TPAKIKKGGLN 527 (699)
T ss_dssp EECCT----TTSCEEEEBSSSCC--------------EEEECCCSSCCCCCEECCSSSSCCEEC-CCS-SSCCEEBCCSS
T ss_pred EEEec----cCCeEEEEecCCCc--------------eEEEEeCCCCCcceEEEccCCCcEEEc-ccC-CCCeEEEEeCC
Confidence 65421 13568888877531 112221 11 11123367777777764 322 23689999887
Q ss_pred CCCCeEEeccCCCCceeeeEEEecC-CEEEEEEEeCCeEEEEEEECCCCceeeecc-cC--CeeEEEeecccCCcEEEEE
Q 003878 393 EPNDWFEVIPEAERDVLESATAVNL-NQMIVSYLSDVKYVLQIRDLKNGSLLHQLP-IE--IGSVNAISARREDSVVFIS 468 (789)
Q Consensus 393 ~~~~~~~l~~~~~~~~i~~v~~~~~-~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~-~~--~~~v~~~s~s~d~~~l~~~ 468 (789)
+.. .+.++... -..-.+++++++ ++||++-.. ..+|++++++ |...+.+. .. .....++++ +++.++++
T Consensus 528 G~~-~~~l~~~~-l~~PnGlavd~~~~~LY~aD~~--~~~I~~~d~d-G~~~~~~~~~~~~~~~P~glav--d~~~lywt 600 (699)
T 1n7d_A 528 GVD-IYSLVTEN-IQWPNGITLDLLSGRLYWVDSK--LHSISSIDVN-GGNRKTILEDEKRLAHPFSLAV--FEDKVFWT 600 (699)
T ss_dssp SCC-CCEESCSS-CSSCCCEEECTTTCCEEEEETT--TTEEEEECSS-SSCCEEECCCSSSCSSCCCCEE--ETTEEEEE
T ss_pred CCC-eeEEEeCC-CCCccEEEEeccCCEEEEEecC--CCeEEEEccC-CCceEEEEecCCcCCCceEeEE--ECCEEEEE
Confidence 654 33443322 123457888853 567765533 3589999997 43323332 11 111112222 44566654
Q ss_pred EcCCCCCcEEEEEECCCCC
Q 003878 469 FTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 469 ~ss~~~P~~ly~~dl~tg~ 487 (789)
- ..-.+|++++..+|+
T Consensus 601 d---~~~~~V~~~d~~~G~ 616 (699)
T 1n7d_A 601 D---IINEAIFSANRLTGS 616 (699)
T ss_dssp C---STTTCEEEEETTTEE
T ss_pred e---CCCCeEEEEEccCCC
Confidence 3 334688999987774
No 495
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.09 E-value=0.017 Score=68.00 Aligned_cols=164 Identities=8% Similarity=0.039 Sum_probs=92.7
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEec-CCCCeeEEEEEEecCCcEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKD-PEHPKYIFSGHVTEDGQYLVM 316 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~-~~~~~~~~~~~~SpDG~~l~~ 316 (789)
.++++.+.++.||++- ....+|++.++.+... ..+... ...+ .+++++|++.+|++
T Consensus 456 ~glavD~~~g~LY~tD------------------~~~~~I~v~d~dg~~~--~~l~~~~~~~P---~giavDp~~g~ly~ 512 (699)
T 1n7d_A 456 DGLAVDWIHSNIYWTD------------------SVLGTVSVADTKGVKR--KTLFREQGSKP---RAIVVDPVHGFMYW 512 (699)
T ss_dssp CCEECCCSSSBCEECC------------------TTTSCEEEEBSSSCCE--EEECCCSSCCC---CCEECCSSSSCCEE
T ss_pred ceEEEEeeCCcEEEEe------------------ccCCeEEEEecCCCce--EEEEeCCCCCc---ceEEEccCCCcEEE
Confidence 4567666677777652 1223477777654321 222221 1222 25688998888876
Q ss_pred EEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-cccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCC
Q 003878 317 CIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEP 394 (789)
Q Consensus 317 ~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~ 394 (789)
+... ....|+++++++.. ...+. .... ..-..+++++++||+.-. ...+|.++++++.
T Consensus 513 td~~---~~~~I~~~~~dG~~--------------~~~l~~~~l~~PnGlavd~~~~~LY~aD~---~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 513 TDWG---TPAKIKKGGLNGVD--------------IYSLVTENIQWPNGITLDLLSGRLYWVDS---KLHSISSIDVNGG 572 (699)
T ss_dssp CCCS---SSCCEEBCCSSSCC--------------CCEESCSSCSSCCCEEECTTTCCEEEEET---TTTEEEEECSSSS
T ss_pred cccC---CCCeEEEEeCCCCC--------------eeEEEeCCCCCccEEEEeccCCEEEEEec---CCCeEEEEccCCC
Confidence 5421 12568888876521 11111 1111 112348888888987643 3578999999865
Q ss_pred CCeEEeccCC-CCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeeccc
Q 003878 395 NDWFEVIPEA-ERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI 448 (789)
Q Consensus 395 ~~~~~l~~~~-~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~ 448 (789)
. .+.++... ....-.++++.. +.+|++.... .+|.+++..+|+.++.|..
T Consensus 573 ~-~~~~~~~~~~~~~P~glavd~-~~lywtd~~~--~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 573 N-RKTILEDEKRLAHPFSLAVFE-DKVFWTDIIN--EAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp C-CEEECCCSSSCSSCCCCEEET-TEEEEECSTT--TCEEEEETTTEEEEECCCT
T ss_pred c-eEEEEecCCcCCCceEeEEEC-CEEEEEeCCC--CeEEEEEccCCCceEEeec
Confidence 4 34454321 112234667776 6777766433 4788999877876555543
No 496
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.05 E-value=1.1 Score=49.83 Aligned_cols=131 Identities=15% Similarity=0.034 Sum_probs=67.8
Q ss_pred ceEEE-------EeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCC--CCC--Cc-EEEEecCCCCeeEEEE
Q 003878 238 SSIAW-------THDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGT--KQS--ED-ILCWKDPEHPKYIFSG 305 (789)
Q Consensus 238 ~~~~w-------spDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~--~~~--~~-~~~~~~~~~~~~~~~~ 305 (789)
..++| ++||++||+....... ......+++.+... .-. .+ ..+-.. .++. ++
T Consensus 189 ~~ia~~~~~~~~d~~G~~lyvad~~~~~------------~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~~p~---gi 252 (496)
T 3kya_A 189 RSIAFNKKIEGYADEAEYMIVAIDYDGK------------GDESPSVYIIKRNADGTFDDRSDIQLIAAY-KQCN---GA 252 (496)
T ss_dssp EEEEECCCBTTTBCTTCEEEEEECCCTT------------GGGEEEEEEEECCTTSCCSTTSCEEEEEEE-SCCC---CE
T ss_pred cEEEEeecccccCCCCCEEEEEeCCCCC------------cccCceEEEEecCCCCceeecccceeeccC-CCce---EE
Confidence 57899 9999988877432100 01233466665433 111 11 222221 2232 46
Q ss_pred EEecCCcEEEEEEEcCCCCceEEEEEECC-------CCCCCcccccccCCCCccEeeec---cccceeEEEecCCCEEEE
Q 003878 306 HVTEDGQYLVMCIEENCDPVNKVYYCDLS-------ALPEGLEGFKKRDGLLPFVKLID---GFDAQYEVIANDDTVFTF 375 (789)
Q Consensus 306 ~~SpDG~~l~~~~~~~~~~~~~i~~~d~~-------~g~~~~~~~~~~~~~~~~~~l~~---~~~~~~~~~s~dG~~l~~ 375 (789)
+.+|++++|++.... ...|+.+|++ ++... ....+.... ....+.. ........++|+|+.||+
T Consensus 253 avdp~~g~LYvtd~~----~g~V~r~d~~~~~~~~~tg~~~-tp~~~~~~g-~~~~l~~~~~~~~p~~ia~~p~G~~lYv 326 (496)
T 3kya_A 253 TIHPINGELYFNSYE----KGQVFRLDLVDYFKTIKNGGSW-DPIVKNNPN-TFKQLFTIADPSWEFQIFIHPTGKYAYF 326 (496)
T ss_dssp EECTTTCCEEEEETT----TTEEEEECHHHHHHHHHTTCCC-CCBGGGCTT-TEEEEEECSSSSCCEEEEECTTSSEEEE
T ss_pred EEcCCCCeEEEEECC----CCEEEEEecccccccccCceee-ccccccccc-ccceeEecCCCCCceEEEEcCCCCEEEE
Confidence 789988888876543 3569999987 43210 000000000 0112211 111233558999998887
Q ss_pred EECCCCCCceEEEEECCC
Q 003878 376 LTNKDAPKYKIIRVDLKE 393 (789)
Q Consensus 376 ~tn~~~~~~~L~~~dl~~ 393 (789)
.- ..+.+|++++.+.
T Consensus 327 aD---~~~h~I~kid~dg 341 (496)
T 3kya_A 327 GV---INNHYFMRSDYDE 341 (496)
T ss_dssp EE---TTTTEEEEEEEET
T ss_pred Ee---CCCCEEEEEecCC
Confidence 54 2457899977644
No 497
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=95.96 E-value=0.4 Score=49.03 Aligned_cols=179 Identities=12% Similarity=0.043 Sum_probs=95.5
Q ss_pred ccEEEEEECCCCCCCcEEEEecCCCC-eeEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCcc
Q 003878 274 YHEFYYHFLGTKQSEDILCWKDPEHP-KYIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPF 352 (789)
Q Consensus 274 ~~~i~~~~lg~~~~~~~~~~~~~~~~-~~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~ 352 (789)
...|+.++..++. .++.-+.+. .....+.++|||+.++ +. ...|+.+|. +++ ..|
T Consensus 14 ~~~v~~~d~~tG~----~~w~~~~~~~~~~~~~~~~pdG~ilv--s~-----~~~V~~~d~-~G~------------~~W 69 (276)
T 3no2_A 14 WNKIAIINKDTKE----IVWEYPLEKGWECNSVAATKAGEILF--SY-----SKGAKMITR-DGR------------ELW 69 (276)
T ss_dssp CSEEEEEETTTTE----EEEEEECCTTCCCCEEEECTTSCEEE--EC-----BSEEEEECT-TSC------------EEE
T ss_pred CCEEEEEECCCCe----EEEEeCCCccCCCcCeEECCCCCEEE--eC-----CCCEEEECC-CCC------------EEE
Confidence 3457777765542 233222111 1123678899999776 22 345888888 432 112
Q ss_pred Eeeecc-ccceeEEEecCCCEEEEEECCCCCCceEEEEECCCCCCeEEeccCC---CCceeeeEEEecCCEEEEEEEeCC
Q 003878 353 VKLIDG-FDAQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPNDWFEVIPEA---ERDVLESATAVNLNQMIVSYLSDV 428 (789)
Q Consensus 353 ~~l~~~-~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~~~~~l~~~~---~~~~i~~v~~~~~~~lv~~~~~~g 428 (789)
..-... .......+.+||+.++..+. .+.+|+.++.++...|+.-+... .......+.+.+++.++++...++
T Consensus 70 ~~~~~~~~~~~~~~~~~dG~~lv~~~~---~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~ 146 (276)
T 3no2_A 70 NIAAPAGCEMQTARILPDGNALVAWCG---HPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATS 146 (276)
T ss_dssp EEECCTTCEEEEEEECTTSCEEEEEES---TTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTT
T ss_pred EEcCCCCccccccEECCCCCEEEEecC---CCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCC
Confidence 211110 11112346789987775443 14688888864432222211111 111223445566566666655554
Q ss_pred eEEEEEEECCCCceeeecccCCeeEEEeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 429 KYVLQIRDLKNGSLLHQLPIEIGSVNAISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 429 ~~~L~~~dl~tG~~~~~l~~~~~~v~~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
.|+.+|.+ |+.+..+..+.. ...+...++++.++.... ..+++.+|..+|+
T Consensus 147 --~v~~~d~~-G~~~w~~~~~~~-~~~~~~~~~g~~~v~~~~----~~~v~~~d~~tG~ 197 (276)
T 3no2_A 147 --EVREIAPN-GQLLNSVKLSGT-PFSSAFLDNGDCLVACGD----AHCFVQLNLESNR 197 (276)
T ss_dssp --EEEEECTT-SCEEEEEECSSC-CCEEEECTTSCEEEECBT----TSEEEEECTTTCC
T ss_pred --EEEEECCC-CCEEEEEECCCC-ccceeEcCCCCEEEEeCC----CCeEEEEeCcCCc
Confidence 79999998 887666554321 112344567775554322 3589999999886
No 498
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.93 E-value=0.64 Score=53.52 Aligned_cols=199 Identities=11% Similarity=0.029 Sum_probs=113.0
Q ss_pred ceEEEEeCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECCCCCCCcEEEEecCCCCeeEEEEEEecCCcEEEEE
Q 003878 238 SSIAWTHDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLGTKQSEDILCWKDPEHPKYIFSGHVTEDGQYLVMC 317 (789)
Q Consensus 238 ~~~~wspDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~SpDG~~l~~~ 317 (789)
.+++|++++..||++-. ...+|++..+.+.... ..+....- ....++++.+.++.|++.
T Consensus 43 ~~ld~~~~~~~ly~sD~------------------~~~~I~r~~~~g~~~~-~~v~~~~~--~~P~GlAvD~~~~~ly~~ 101 (619)
T 3s94_A 43 AAVDFVFSHGLIYWSDV------------------SEEAIKRTEFNKTESV-QNVVVSGL--LSPDGLACDWLGEKLYWT 101 (619)
T ss_dssp EEEEEETTTTEEEEEET------------------TTTEEEEEEC-----C-EEEECSSC--SCEEEEEEETTTTEEEEE
T ss_pred EEEEEEeCCCEEEEEEC------------------CCCeEEEEEccCCCce-EEEEeCCC--CCcCeEEEEecCCEEEEE
Confidence 57899998999988732 2346888887654221 23333221 123578899988888776
Q ss_pred EEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeee-cccc-ceeEEEecCCCEEEEEECCCCCCceEEEEECCCCC
Q 003878 318 IEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLI-DGFD-AQYEVIANDDTVFTFLTNKDAPKYKIIRVDLKEPN 395 (789)
Q Consensus 318 ~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~-~~~~-~~~~~~s~dG~~l~~~tn~~~~~~~L~~~dl~~~~ 395 (789)
-.. ...|.++++++.. ...+. .... ..--.+.|.+..||+.... .+.+|.+.++++..
T Consensus 102 d~~----~~~I~v~~~dG~~--------------~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g--~~~~I~r~~~dG~~ 161 (619)
T 3s94_A 102 DSE----TNRIEVSNLDGSL--------------RKVLFWQELDQPRAIALDPSSGFMYWTDWG--EVPKIERAGMDGSS 161 (619)
T ss_dssp ETT----TTEEEEEETTSCS--------------CEEEECSSCSCCCCEEEETTTTEEEEEECS--SSCEEEEEETTSCS
T ss_pred eCC----CCEEEEEECCCCC--------------EEEEEeCCCCCCceEEEecCCCeEEEeccC--CCCEEEEEECCCCc
Confidence 422 4679999987631 11222 1111 1123467777788876432 35789999998765
Q ss_pred CeEEeccCCCCceeeeEEEec-CCEEEEEEEeCCeEEEEEEECCCCceeeeccc-CCeeEEEeecccCCcEEEEEEcCCC
Q 003878 396 DWFEVIPEAERDVLESATAVN-LNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPI-EIGSVNAISARREDSVVFISFTSFL 473 (789)
Q Consensus 396 ~~~~l~~~~~~~~i~~v~~~~-~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~-~~~~v~~~s~s~d~~~l~~~~ss~~ 473 (789)
.+.++... -..-.++++.. +++||+.-.. ...|++++++ |...+.+.. ......+++. +++.++++ . .
T Consensus 162 -~~~l~~~~-~~~P~Glald~~~~~LY~aD~~--~~~I~~~~~d-G~~~~~~~~~~~~~P~gi~~--~~~~ly~t--d-~ 231 (619)
T 3s94_A 162 -RFIIINSE-IYWPNGLTLDYEEQKLYWADAK--LNFIHKSNLD-GTNRQAVVKGSLPHPFALTL--FEDILYWT--D-W 231 (619)
T ss_dssp -CEEEECSS-CSSEEEEEEETTTTEEEEEETT--TCCEEEESSS-CCEEC---------CCCEEE--SSSEEEEE--C-T
T ss_pred -eEEEEeCC-CCCCcEEEEEccCCEEEEEeCC--CCeEEEecCC-CCccEEEEeCCCCCceEEEE--eCCEEEEe--c-C
Confidence 45555433 23446788885 3678776433 3589999997 544333321 1111112333 34456654 2 2
Q ss_pred CCcEEEEEECCCCC
Q 003878 474 IPGIVYQCNLKTET 487 (789)
Q Consensus 474 ~P~~ly~~dl~tg~ 487 (789)
.-..|.++|..+++
T Consensus 232 ~~~~V~~~d~~tg~ 245 (619)
T 3s94_A 232 STHSILACNKYTGE 245 (619)
T ss_dssp TTCSEEEEESSSCC
T ss_pred CCCEEEEEECCCCc
Confidence 34688999987775
No 499
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.92 E-value=0.66 Score=46.88 Aligned_cols=151 Identities=13% Similarity=0.074 Sum_probs=91.1
Q ss_pred eEEEEEEecCCcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecccccee-EEEecCCCEEEEEECC
Q 003878 301 YIFSGHVTEDGQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDGFDAQY-EVIANDDTVFTFLTNK 379 (789)
Q Consensus 301 ~~~~~~~SpDG~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~s~dG~~l~~~tn~ 379 (789)
+..++.++ ++.|+++... ...|..+|+++++ ....+.... .+ .-+..+|++||+++.+
T Consensus 56 ftqGL~~~--~~~Ly~stG~----~g~v~~iD~~Tgk-------------v~~~~l~~~--~FgeGit~~g~~Ly~ltw~ 114 (268)
T 3nok_A 56 FTQGLVFH--QGHFFESTGH----QGTLRQLSLESAQ-------------PVWMERLGN--IFAEGLASDGERLYQLTWT 114 (268)
T ss_dssp CEEEEEEE--TTEEEEEETT----TTEEEECCSSCSS-------------CSEEEECTT--CCEEEEEECSSCEEEEESS
T ss_pred ccceEEEE--CCEEEEEcCC----CCEEEEEECCCCc-------------EEeEECCCC--cceeEEEEeCCEEEEEEcc
Confidence 34566665 5777776533 2338999999863 122222211 11 1256688999998765
Q ss_pred CCCCceEEEEECCCCCCeEEeccCCCCceeeeEEEecCCEEEEEEEeCCeEEEEEEECCCCceeeecccC-----CeeEE
Q 003878 380 DAPKYKIIRVDLKEPNDWFEVIPEAERDVLESATAVNLNQMIVSYLSDVKYVLQIRDLKNGSLLHQLPIE-----IGSVN 454 (789)
Q Consensus 380 ~~~~~~L~~~dl~~~~~~~~l~~~~~~~~i~~v~~~~~~~lv~~~~~~g~~~L~~~dl~tG~~~~~l~~~-----~~~v~ 454 (789)
+ ..++++|.++.+...++ +..... -+++... ++|+++ ++..+|+++|.++.+..+.+... ...+.
T Consensus 115 ~---~~v~V~D~~Tl~~~~ti-~~~~eG--wGLt~Dg-~~L~vS---dGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lN 184 (268)
T 3nok_A 115 E---GLLFTWSGMPPQRERTT-RYSGEG--WGLCYWN-GKLVRS---DGGTMLTFHEPDGFALVGAVQVKLRGQPVELIN 184 (268)
T ss_dssp S---CEEEEEETTTTEEEEEE-ECSSCC--CCEEEET-TEEEEE---CSSSEEEEECTTTCCEEEEEECEETTEECCCEE
T ss_pred C---CEEEEEECCcCcEEEEE-eCCCce--eEEecCC-CEEEEE---CCCCEEEEEcCCCCeEEEEEEeCCCCccccccc
Confidence 3 68999999887633333 222111 2455444 667664 35669999999988876766553 11233
Q ss_pred EeecccCCcEEEEEEcCCCCCcEEEEEECCCCC
Q 003878 455 AISARREDSVVFISFTSFLIPGIVYQCNLKTET 487 (789)
Q Consensus 455 ~~s~s~d~~~l~~~~ss~~~P~~ly~~dl~tg~ 487 (789)
.+.+. ++ .++.. .+ .-..|.++|+++|+
T Consensus 185 eLe~~-dG-~lyan--vw-~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 185 ELECA-NG-VIYAN--IW-HSSDVLEIDPATGT 212 (268)
T ss_dssp EEEEE-TT-EEEEE--ET-TCSEEEEECTTTCB
T ss_pred ccEEe-CC-EEEEE--EC-CCCeEEEEeCCCCc
Confidence 34443 45 56643 33 34599999999996
No 500
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=95.79 E-value=0.33 Score=49.75 Aligned_cols=118 Identities=8% Similarity=-0.019 Sum_probs=65.2
Q ss_pred ceEEEE----eCCcEEEEEEccCCCCCCCCCCCccccCCcccEEEEEECC-CCCCCc-EEEEecCCCC-eeEEEEEEecC
Q 003878 238 SSIAWT----HDSKGFFYSRYPAPKEGKDMDAGTETDSNLYHEFYYHFLG-TKQSED-ILCWKDPEHP-KYIFSGHVTED 310 (789)
Q Consensus 238 ~~~~ws----pDg~~i~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~lg-~~~~~~-~~~~~~~~~~-~~~~~~~~SpD 310 (789)
.+++|+ |||+.|+++.. ....|+++++. ++.... ..+...+... ....++.+++|
T Consensus 175 ~~i~~~~~~d~dg~~l~v~~~------------------~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~ 236 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVAET------------------PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDED 236 (314)
T ss_dssp EEEEEEECTTSCEEEEEEEET------------------TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTT
T ss_pred ceEEEecccCCCCCEEEEEEC------------------CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCC
Confidence 578999 99988887632 12457777654 211111 1222222221 33457889999
Q ss_pred CcEEEEEEEcCCCCceEEEEEECCCCCCCcccccccCCCCccEeeecc-ccceeEEEecCCCEEEEEECCCCCCceEEEE
Q 003878 311 GQYLVMCIEENCDPVNKVYYCDLSALPEGLEGFKKRDGLLPFVKLIDG-FDAQYEVIANDDTVFTFLTNKDAPKYKIIRV 389 (789)
Q Consensus 311 G~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~s~dG~~l~~~tn~~~~~~~L~~~ 389 (789)
|+..+ .... ...|++++.+++. ....+... ....-..++++|+.||+.+.. +..|+++
T Consensus 237 G~l~v-~~~~----~~~i~~~d~~~g~-------------~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~---~~~l~~~ 295 (314)
T 1pjx_A 237 NNLLV-ANWG----SSHIEVFGPDGGQ-------------PKMRIRCPFEKPSNLHFKPQTKTIFVTEHE---NNAVWKF 295 (314)
T ss_dssp CCEEE-EEET----TTEEEEECTTCBS-------------CSEEEECSSSCEEEEEECTTSSEEEEEETT---TTEEEEE
T ss_pred CCEEE-EEcC----CCEEEEEcCCCCc-------------EeEEEeCCCCCceeEEECCCCCEEEEEeCC---CCeEEEE
Confidence 96443 3321 3468889887532 01111111 111123368899988887654 3579999
Q ss_pred ECCCC
Q 003878 390 DLKEP 394 (789)
Q Consensus 390 dl~~~ 394 (789)
+++..
T Consensus 296 ~~~~~ 300 (314)
T 1pjx_A 296 EWQRN 300 (314)
T ss_dssp ECSSC
T ss_pred eCCCC
Confidence 88654
Done!